Your job contains 1 sequence.
>psy2071
MSKRRLDVIDPYITKKNREERLATVNASVSTSIASNLQVNPFTGYPYTPRYHELHRKRIT
LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAA
MSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVIL
LDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHP
VEIFYTPEPPLGAGPWLPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQRFG
LF
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2071
(302 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 933 7.8e-114 2
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 862 5.7e-109 3
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 855 1.0e-107 3
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 861 1.3e-105 2
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 861 1.3e-105 2
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 861 1.3e-105 2
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 861 1.3e-105 2
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 861 1.3e-105 2
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 861 1.3e-105 2
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 769 4.8e-93 2
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 769 4.8e-93 2
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 737 5.6e-90 2
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 722 1.3e-88 2
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 719 9.3e-84 2
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 702 6.5e-83 2
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 694 4.0e-81 2
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 680 1.7e-80 2
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 694 2.2e-80 2
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 657 1.1e-76 2
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 616 6.9e-68 3
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 614 1.3e-67 3
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 614 1.6e-67 3
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 614 1.7e-67 3
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 614 1.7e-67 3
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 614 1.8e-67 3
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 614 1.9e-67 3
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 614 2.1e-67 3
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 614 2.1e-67 3
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 614 2.7e-67 3
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 598 4.0e-66 2
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 607 9.2e-66 2
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 604 2.8e-64 2
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 594 4.3e-64 2
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 592 5.3e-64 2
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 593 1.7e-63 2
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 603 2.4e-63 2
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 599 2.8e-63 2
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 604 3.0e-63 2
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 606 3.4e-63 2
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 606 3.4e-63 2
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 608 3.6e-63 2
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 591 3.9e-63 2
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 605 5.4e-63 2
UNIPROTKB|H9KZI9 - symbol:LOC100858239 "Uncharacterized p... 616 1.1e-62 2
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 598 1.4e-62 2
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 580 1.4e-62 2
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 597 1.8e-62 2
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 597 1.8e-62 2
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 591 2.7e-62 2
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 582 3.3e-62 2
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 583 4.3e-62 2
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 583 4.3e-62 2
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 592 6.5e-62 2
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 592 6.5e-62 2
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 590 1.0e-61 2
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 583 2.0e-61 2
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 554 4.2e-61 2
CGD|CAL0005059 - symbol:orf19.2818 species:5476 "Candida ... 569 1.1e-60 2
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 558 1.8e-60 2
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 577 2.2e-60 2
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 578 3.2e-60 2
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 530 3.6e-60 3
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 560 3.8e-60 2
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 585 1.0e-59 2
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 585 1.0e-59 2
UNIPROTKB|E1C094 - symbol:E1C094 "Uncharacterized protein... 568 1.7e-59 2
UNIPROTKB|F1NY80 - symbol:F1NY80 "Uncharacterized protein... 568 1.8e-59 2
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 566 4.9e-59 2
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 566 4.9e-59 2
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 567 5.4e-59 2
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 550 3.4e-58 2
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 557 4.5e-58 2
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 557 4.5e-58 2
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 556 5.7e-58 2
UNIPROTKB|F1MVJ1 - symbol:DHX38 "Pre-mRNA-splicing factor... 558 9.1e-58 2
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 558 9.2e-58 2
UNIPROTKB|F1PER1 - symbol:DHX32 "Uncharacterized protein"... 521 1.3e-57 2
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 548 2.0e-57 2
UNIPROTKB|B0V0F8 - symbol:DHX16 "Putative pre-mRNA-splici... 590 2.2e-57 1
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 537 2.3e-57 2
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 526 3.3e-57 2
MGI|MGI:2141813 - symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) bo... 514 6.6e-57 2
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 514 6.9e-57 2
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 516 1.1e-56 2
UNIPROTKB|E1C4U5 - symbol:DHX35 "Uncharacterized protein"... 516 2.3e-56 2
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 516 2.9e-56 2
UNIPROTKB|A7MBI4 - symbol:DHX32 "DHX32 protein" species:9... 507 3.1e-56 2
RGD|1311740 - symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box po... 510 3.5e-56 2
UNIPROTKB|F1MWZ4 - symbol:F1MWZ4 "Uncharacterized protein... 516 4.8e-56 2
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 508 1.3e-55 2
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 508 1.3e-55 2
SGD|S000005294 - symbol:PRP2 "RNA-dependent ATPase in the... 577 1.5e-55 1
UNIPROTKB|E2RQN7 - symbol:DHX35 "Uncharacterized protein"... 510 1.6e-55 2
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 512 2.6e-55 2
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 512 2.6e-55 2
UNIPROTKB|E2RQN1 - symbol:DHX35 "Uncharacterized protein"... 508 2.6e-55 2
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 520 3.3e-55 2
UNIPROTKB|Q7L7V1 - symbol:DHX32 "Putative pre-mRNA-splici... 506 3.7e-55 2
UNIPROTKB|Q9H6R0 - symbol:DHX33 "Putative ATP-dependent R... 507 1.1e-54 2
MGI|MGI:2445102 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) bo... 508 1.8e-54 2
WARNING: Descriptions of 196 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 933 (333.5 bits), Expect = 7.8e-114, Sum P(2) = 7.8e-114
Identities = 184/260 (70%), Positives = 217/260 (83%)
Query: 1 MSKRRLDVIDPYITKKNREERLATVNASVST-SIAS-------NLQ---VNPFTGYPYTP 49
MSKRR++V + Y +K ++ ++ +A+ + ++A N Q +NP T PY+
Sbjct: 1 MSKRRIEVGETYGSKAKKDPEASSSSAAAAAGTVAQILGGFVPNKQPPTMNPLTNTPYSQ 60
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
RY L++KRI LPVFEY+ +FM LL+ +QCIVLVGETGSGKTTQIPQWCV+++ S G K
Sbjct: 61 RYQNLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSKGRKG 120
Query: 110 VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS 169
V+CTQPRRVAAMSVAQRVSEEMD +LG+EVGYSIRFEDCS+ KT+LKYMTDGMLLRE MS
Sbjct: 121 VSCTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAMS 180
Query: 170 DPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNA 229
DPML+ YQVILLDEAHERTLATDILMGVLKEVI+QR+DLKLV+MSATLDAGKFQQYFDNA
Sbjct: 181 DPMLDQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNA 240
Query: 230 PLMNVPGRTHPVEIFYTPEP 249
PLM VPGRTHPVEIFYTPEP
Sbjct: 241 PLMKVPGRTHPVEIFYTPEP 260
Score = 210 (79.0 bits), Expect = 7.8e-114, Sum P(2) = 7.8e-114
Identities = 38/41 (92%), Positives = 40/41 (97%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
+PQCF RPNEAKKAAD+AKMRFAHIDGDHLTLLNVYHAFKQ
Sbjct: 529 VPQCFVRPNEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ 569
Score = 40 (19.1 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 207 DLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
+LK + + +TL Q+ F+ AP N G
Sbjct: 315 ELKCIPLYSTLPPNLQQRIFEPAPPPNANG 344
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 862 (308.5 bits), Expect = 5.7e-109, Sum P(3) = 5.7e-109
Identities = 169/246 (68%), Positives = 200/246 (81%)
Query: 16 KNREERLATVNASVSTSIASNL----------QVNPFTGYPYTPRYHELHRKRITLPVFE 65
+ RE+ AS ST IA+ L +NPFT P+TPRY+++ +KR+ LPV+E
Sbjct: 49 REREKEKELRAASNSTLIAAGLPPMKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWE 108
Query: 66 YRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSV-GAK-AVACTQPRRVAAMSV 123
Y+ F +L ++Q VLVGETGSGKTTQIPQWCV+Y +S+ G K VACTQPRRVAAMSV
Sbjct: 109 YKERFTDILIRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSV 168
Query: 124 AQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDE 183
AQRV++EMD LGQEVGYSIRFEDCSS KT+LKYMTDGMLLRE M+DP+LE Y VI+LDE
Sbjct: 169 AQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDE 228
Query: 184 AHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEI 243
AHERTLATDILMGVLKEV++QRADLK+++MSATLDAGKFQ YFDN PL+ +PGRTHPVEI
Sbjct: 229 AHERTLATDILMGVLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEI 288
Query: 244 FYTPEP 249
FYTPEP
Sbjct: 289 FYTPEP 294
Score = 204 (76.9 bits), Expect = 5.7e-109, Sum P(3) = 5.7e-109
Identities = 37/41 (90%), Positives = 39/41 (95%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
+PQCF RP EAKKAAD+AKMRFAHIDGDHLTLLNVYHAFKQ
Sbjct: 563 VPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ 603
Score = 45 (20.9 bits), Expect = 5.7e-109, Sum P(3) = 5.7e-109
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 1 MSKR-RLDVIDPYITKKNREE 20
MSKR RLD+ D Y + K R +
Sbjct: 1 MSKRHRLDLGDDYSSSKKRSD 21
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 855 (306.0 bits), Expect = 1.0e-107, Sum P(3) = 1.0e-107
Identities = 160/214 (74%), Positives = 188/214 (87%)
Query: 38 QVNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQW 97
Q+NPFT P+TPRY+E+ +KR+ LPV+EY+ F +L ++Q VLVGETGSGKTTQIPQW
Sbjct: 88 QINPFTNLPHTPRYYEILKKRLQLPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQW 147
Query: 98 CVEYSKSV-GAK-AVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVL 155
CV+ +S+ G K VACTQPRRVAAMSVAQRV++EMD LGQEVGYSIRFEDCSS KT+L
Sbjct: 148 CVDMVRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTIL 207
Query: 156 KYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSA 215
KYMTDGMLLRE M+DP+LE Y VI+LDEAHERTLATDILMGVLKEV++QR+DLK+++MSA
Sbjct: 208 KYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSA 267
Query: 216 TLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEP 249
TLDAGKFQ YFDN PL+ +PGRTHPVEIFYTPEP
Sbjct: 268 TLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEP 301
Score = 201 (75.8 bits), Expect = 1.0e-107, Sum P(3) = 1.0e-107
Identities = 36/41 (87%), Positives = 39/41 (95%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
+PQCF RP EAKKAAD++KMRFAHIDGDHLTLLNVYHAFKQ
Sbjct: 570 VPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHAFKQ 610
Score = 43 (20.2 bits), Expect = 1.0e-107, Sum P(3) = 1.0e-107
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 1 MSKR-RLDVIDPYITKKNR 18
MSKR RLD+ D Y + K R
Sbjct: 1 MSKRHRLDLGDEYSSSKKR 19
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 861 (308.1 bits), Expect = 1.3e-105, Sum P(2) = 1.3e-105
Identities = 160/213 (75%), Positives = 188/213 (88%)
Query: 39 VNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWC 98
+NPFT P+TPRY+++ +KR+ LPV+EY+ F +L ++Q VLVGETGSGKTTQIPQWC
Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174
Query: 99 VEYSKSV-GAK-AVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLK 156
VEY +S+ G K VACTQPRRVAAMSVAQRV++EMD LGQEVGYSIRFEDCSS KT+LK
Sbjct: 175 VEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILK 234
Query: 157 YMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSAT 216
YMTDGMLLRE M+DP+LE Y VI+LDEAHERTLATDILMGVLKEV++QR+DLK+++MSAT
Sbjct: 235 YMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSAT 294
Query: 217 LDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEP 249
LDAGKFQ YFDN PL+ +PGRTHPVEIFYTPEP
Sbjct: 295 LDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEP 327
Score = 204 (76.9 bits), Expect = 1.3e-105, Sum P(2) = 1.3e-105
Identities = 37/41 (90%), Positives = 39/41 (95%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
+PQCF RP EAKKAAD+AKMRFAHIDGDHLTLLNVYHAFKQ
Sbjct: 596 VPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ 636
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 861 (308.1 bits), Expect = 1.3e-105, Sum P(2) = 1.3e-105
Identities = 160/213 (75%), Positives = 188/213 (88%)
Query: 39 VNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWC 98
+NPFT P+TPRY+++ +KR+ LPV+EY+ F +L ++Q VLVGETGSGKTTQIPQWC
Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174
Query: 99 VEYSKSV-GAK-AVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLK 156
VEY +S+ G K VACTQPRRVAAMSVAQRV++EMD LGQEVGYSIRFEDCSS KT+LK
Sbjct: 175 VEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILK 234
Query: 157 YMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSAT 216
YMTDGMLLRE M+DP+LE Y VI+LDEAHERTLATDILMGVLKEV++QR+DLK+++MSAT
Sbjct: 235 YMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSAT 294
Query: 217 LDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEP 249
LDAGKFQ YFDN PL+ +PGRTHPVEIFYTPEP
Sbjct: 295 LDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEP 327
Score = 204 (76.9 bits), Expect = 1.3e-105, Sum P(2) = 1.3e-105
Identities = 37/41 (90%), Positives = 39/41 (95%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
+PQCF RP EAKKAAD+AKMRFAHIDGDHLTLLNVYHAFKQ
Sbjct: 596 VPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ 636
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 861 (308.1 bits), Expect = 1.3e-105, Sum P(2) = 1.3e-105
Identities = 160/213 (75%), Positives = 188/213 (88%)
Query: 39 VNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWC 98
+NPFT P+TPRY+++ +KR+ LPV+EY+ F +L ++Q VLVGETGSGKTTQIPQWC
Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174
Query: 99 VEYSKSV-GAK-AVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLK 156
VEY +S+ G K VACTQPRRVAAMSVAQRV++EMD LGQEVGYSIRFEDCSS KT+LK
Sbjct: 175 VEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILK 234
Query: 157 YMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSAT 216
YMTDGMLLRE M+DP+LE Y VI+LDEAHERTLATDILMGVLKEV++QR+DLK+++MSAT
Sbjct: 235 YMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSAT 294
Query: 217 LDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEP 249
LDAGKFQ YFDN PL+ +PGRTHPVEIFYTPEP
Sbjct: 295 LDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEP 327
Score = 204 (76.9 bits), Expect = 1.3e-105, Sum P(2) = 1.3e-105
Identities = 37/41 (90%), Positives = 39/41 (95%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
+PQCF RP EAKKAAD+AKMRFAHIDGDHLTLLNVYHAFKQ
Sbjct: 596 VPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ 636
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 861 (308.1 bits), Expect = 1.3e-105, Sum P(2) = 1.3e-105
Identities = 160/213 (75%), Positives = 188/213 (88%)
Query: 39 VNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWC 98
+NPFT P+TPRY+++ +KR+ LPV+EY+ F +L ++Q VLVGETGSGKTTQIPQWC
Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174
Query: 99 VEYSKSV-GAK-AVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLK 156
VEY +S+ G K VACTQPRRVAAMSVAQRV++EMD LGQEVGYSIRFEDCSS KT+LK
Sbjct: 175 VEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILK 234
Query: 157 YMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSAT 216
YMTDGMLLRE M+DP+LE Y VI+LDEAHERTLATDILMGVLKEV++QR+DLK+++MSAT
Sbjct: 235 YMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSAT 294
Query: 217 LDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEP 249
LDAGKFQ YFDN PL+ +PGRTHPVEIFYTPEP
Sbjct: 295 LDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEP 327
Score = 204 (76.9 bits), Expect = 1.3e-105, Sum P(2) = 1.3e-105
Identities = 37/41 (90%), Positives = 39/41 (95%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
+PQCF RP EAKKAAD+AKMRFAHIDGDHLTLLNVYHAFKQ
Sbjct: 596 VPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ 636
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 861 (308.1 bits), Expect = 1.3e-105, Sum P(2) = 1.3e-105
Identities = 160/213 (75%), Positives = 188/213 (88%)
Query: 39 VNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWC 98
+NPFT P+TPRY+++ +KR+ LPV+EY+ F +L ++Q VLVGETGSGKTTQIPQWC
Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174
Query: 99 VEYSKSV-GAK-AVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLK 156
VEY +S+ G K VACTQPRRVAAMSVAQRV++EMD LGQEVGYSIRFEDCSS KT+LK
Sbjct: 175 VEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILK 234
Query: 157 YMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSAT 216
YMTDGMLLRE M+DP+LE Y VI+LDEAHERTLATDILMGVLKEV++QR+DLK+++MSAT
Sbjct: 235 YMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSAT 294
Query: 217 LDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEP 249
LDAGKFQ YFDN PL+ +PGRTHPVEIFYTPEP
Sbjct: 295 LDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEP 327
Score = 204 (76.9 bits), Expect = 1.3e-105, Sum P(2) = 1.3e-105
Identities = 37/41 (90%), Positives = 39/41 (95%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
+PQCF RP EAKKAAD+AKMRFAHIDGDHLTLLNVYHAFKQ
Sbjct: 596 VPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ 636
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 861 (308.1 bits), Expect = 1.3e-105, Sum P(2) = 1.3e-105
Identities = 160/213 (75%), Positives = 188/213 (88%)
Query: 39 VNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWC 98
+NPFT P+TPRY+++ +KR+ LPV+EY+ F +L ++Q VLVGETGSGKTTQIPQWC
Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174
Query: 99 VEYSKSV-GAK-AVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLK 156
VEY +S+ G K VACTQPRRVAAMSVAQRV++EMD LGQEVGYSIRFEDCSS KT+LK
Sbjct: 175 VEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILK 234
Query: 157 YMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSAT 216
YMTDGMLLRE M+DP+LE Y VI+LDEAHERTLATDILMGVLKEV++QR+DLK+++MSAT
Sbjct: 235 YMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSAT 294
Query: 217 LDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEP 249
LDAGKFQ YFDN PL+ +PGRTHPVEIFYTPEP
Sbjct: 295 LDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEP 327
Score = 204 (76.9 bits), Expect = 1.3e-105, Sum P(2) = 1.3e-105
Identities = 37/41 (90%), Positives = 39/41 (95%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
+PQCF RP EAKKAAD+AKMRFAHIDGDHLTLLNVYHAFKQ
Sbjct: 596 VPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ 636
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 769 (275.8 bits), Expect = 4.8e-93, Sum P(2) = 4.8e-93
Identities = 147/218 (67%), Positives = 179/218 (82%)
Query: 37 LQVNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQ 96
+Q+NP+ P++ RY + KR LPV+EY+ +FM LL NQCI LVGETGSGKTTQIPQ
Sbjct: 52 IQINPYNNQPFSNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQ 111
Query: 97 WCVEYSKSV------G-AKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCS 149
W VE+ K G A+ VACTQPRRVAAMSVA RV+EEMD LGQEVGYSIRFEDC
Sbjct: 112 WAVEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCI 171
Query: 150 SPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLK 209
S +TVLKY TDGMLLRE M+ P+L+ Y+V++LDEAHERTLATDILMG++KE+++ RAD+K
Sbjct: 172 SERTVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIK 231
Query: 210 LVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTP 247
+VIMSATLDAGKFQ+YF++ PL++VPGRT PVEIF+TP
Sbjct: 232 VVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTP 269
Score = 177 (67.4 bits), Expect = 4.8e-93, Sum P(2) = 4.8e-93
Identities = 31/41 (75%), Positives = 36/41 (87%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
+PQC+ RPNE + AD+AK RFAHIDGDHLTLLNVYH+FKQ
Sbjct: 540 VPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQ 580
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 769 (275.8 bits), Expect = 4.8e-93, Sum P(2) = 4.8e-93
Identities = 147/218 (67%), Positives = 179/218 (82%)
Query: 37 LQVNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQ 96
+Q+NP+ P++ RY + KR LPV+EY+ +FM LL NQCI LVGETGSGKTTQIPQ
Sbjct: 52 IQINPYNNQPFSNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQ 111
Query: 97 WCVEYSKSV------G-AKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCS 149
W VE+ K G A+ VACTQPRRVAAMSVA RV+EEMD LGQEVGYSIRFEDC
Sbjct: 112 WAVEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCI 171
Query: 150 SPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLK 209
S +TVLKY TDGMLLRE M+ P+L+ Y+V++LDEAHERTLATDILMG++KE+++ RAD+K
Sbjct: 172 SERTVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIK 231
Query: 210 LVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTP 247
+VIMSATLDAGKFQ+YF++ PL++VPGRT PVEIF+TP
Sbjct: 232 VVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTP 269
Score = 177 (67.4 bits), Expect = 4.8e-93, Sum P(2) = 4.8e-93
Identities = 31/41 (75%), Positives = 36/41 (87%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
+PQC+ RPNE + AD+AK RFAHIDGDHLTLLNVYH+FKQ
Sbjct: 540 VPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQ 580
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 737 (264.5 bits), Expect = 5.6e-90, Sum P(2) = 5.6e-90
Identities = 144/219 (65%), Positives = 173/219 (78%)
Query: 36 NLQVNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIP 95
N +N + G PY+ RY+++ KR TLPV+ + EF+ L NQ ++LVGETGSGKTTQIP
Sbjct: 36 NSLINKWNGKPYSQRYYDILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIP 95
Query: 96 QWCV-----EYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSS 150
Q+ + E S V CTQPRRVAAMSV++RV+EEMD +G+EVGYSIRFEDCSS
Sbjct: 96 QFVIDAVDAETSDKRRKWLVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSS 155
Query: 151 PKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKL 210
P+TVLKY+TDGMLLRE M+DP+LE Y+VI+LDEAHERTLATD+L G+LKEV+K R DLKL
Sbjct: 156 PRTVLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKL 215
Query: 211 VIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEP 249
V+MSATL+A KFQ YF APLM VPGR HPVEIFYT EP
Sbjct: 216 VVMSATLEAEKFQDYFSGAPLMKVPGRLHPVEIFYTQEP 254
Score = 180 (68.4 bits), Expect = 5.6e-90, Sum P(2) = 5.6e-90
Identities = 32/41 (78%), Positives = 36/41 (87%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
+P CF RP EA+KAAD+AK RF HI+GDHLTLLNVYHAFKQ
Sbjct: 523 VPNCFIRPREAQKAADEAKARFGHIEGDHLTLLNVYHAFKQ 563
Score = 40 (19.1 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 204 QRADLKLVIMSATLDAGKFQQYFDNAP 230
Q +K+V + +TL Q+ FD AP
Sbjct: 305 QVGPIKVVPLYSTLPPAMQQKIFDPAP 331
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 722 (259.2 bits), Expect = 1.3e-88, Sum P(2) = 1.3e-88
Identities = 145/249 (58%), Positives = 187/249 (75%)
Query: 7 DVI-DPYITKKNREERLATVNASVSTSIASNLQVNPFTGYPYTPRYHELHRKRITLPVFE 65
DV+ DP ++ KN + + + + SNL +N + G Y+ RY E+ KR LPV+
Sbjct: 13 DVMEDPSLSSKNTKSN--GLGLAAAAGGGSNL-INKWNGKAYSQRYFEILEKRRDLPVWL 69
Query: 66 YRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEY----SKSVGAK-AVACTQPRRVAA 120
+ +F+ L NQ ++LVGETGSGKTTQIPQ+ ++ + G K V CTQPRRVAA
Sbjct: 70 QKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQPRRVAA 129
Query: 121 MSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVIL 180
MSV++RV++EMD +G+EVGYSIRFEDC+S +T+LKY+TDGMLLRE M+DP+LE Y+VI+
Sbjct: 130 MSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLLERYKVII 189
Query: 181 LDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHP 240
LDEAHERTLATD+L G+LKEV++ R DLKLV+MSATL+A KFQ+YF APLM VPGR HP
Sbjct: 190 LDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHP 249
Query: 241 VEIFYTPEP 249
VEIFYT EP
Sbjct: 250 VEIFYTQEP 258
Score = 182 (69.1 bits), Expect = 1.3e-88, Sum P(2) = 1.3e-88
Identities = 32/41 (78%), Positives = 36/41 (87%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
+P CF RP EA+KAAD+AK RF HIDGDHLTLLNVYHA+KQ
Sbjct: 527 VPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ 567
Score = 40 (19.1 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 204 QRADLKLVIMSATLDAGKFQQYFDNAPL 231
Q +K+V + +TL Q+ FD AP+
Sbjct: 309 QVGPVKVVPLYSTLPPAMQQKIFDPAPV 336
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 719 (258.2 bits), Expect = 9.3e-84, Sum P(2) = 9.3e-84
Identities = 140/224 (62%), Positives = 175/224 (78%)
Query: 27 ASVSTSIASNLQVNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGET 86
A+ + + N + NPFT PY+ +Y + + R LPV R EF+ L Q+Q +V VGET
Sbjct: 66 AAQAQKVEDN-EFNPFTNRPYSSKYFSILKTRRDLPVHAQRDEFLQLYQQSQILVFVGET 124
Query: 87 GSGKTTQIPQWCV-EYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRF 145
GSGKTTQIPQ+ + + K +ACTQPRRVAAMSVAQRV+ E+D LG+EVGYSIRF
Sbjct: 125 GSGKTTQIPQFVLLDDLPQTQRKMIACTQPRRVAAMSVAQRVAAELDVTLGEEVGYSIRF 184
Query: 146 EDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQR 205
ED +SPKT+LKYMTDGMLLRE M+D L Y I+LDEAHERT++TD+LMG+LKEV+++R
Sbjct: 185 EDMTSPKTLLKYMTDGMLLREAMNDHELSRYSTIILDEAHERTMSTDVLMGLLKEVVQRR 244
Query: 206 ADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEP 249
DLK++IMSATLDA KFQ+YF++APL+ VPGRTHPVEIFYTPEP
Sbjct: 245 PDLKIIIMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFYTPEP 288
Score = 139 (54.0 bits), Expect = 9.3e-84, Sum P(2) = 9.3e-84
Identities = 26/40 (65%), Positives = 29/40 (72%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
+PQ F RP +K AD+ K FAH DGDHLTLLN YHAFK
Sbjct: 559 VPQIFVRPASQRKRADEMKNLFAHPDGDHLTLLNAYHAFK 598
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 702 (252.2 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 138/212 (65%), Positives = 171/212 (80%)
Query: 38 QVNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQW 97
++NPFTG +TP+Y ++ + R LPV R EF+ L NQ +V VGETGSGKTTQIPQ+
Sbjct: 70 KINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQF 129
Query: 98 CV-EYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLK 156
+ + + VACTQPRRVAAMSVAQRV+EEMD +LG+EVGYSIRFE+ +S KT+LK
Sbjct: 130 VLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILK 189
Query: 157 YMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSAT 216
YMTDGMLLRE M D L Y I+LDEAHERTLATDILMG+LK+V+K+R DLK++IMSAT
Sbjct: 190 YMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSAT 249
Query: 217 LDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPE 248
LDA KFQ+YF++APL+ VPGRT+PVE++YTPE
Sbjct: 250 LDAEKFQRYFNDAPLLAVPGRTYPVELYYTPE 281
Score = 148 (57.2 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
+P F RP + KK ADDAK FAH DGDH+TLLNVYHAFK
Sbjct: 551 VPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFK 590
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 694 (249.4 bits), Expect = 4.0e-81, Sum P(2) = 4.0e-81
Identities = 136/234 (58%), Positives = 180/234 (76%)
Query: 17 NREERLATVNASVSTSIASNLQVNPFTGYP--YTPRYHELHRKRITLPVFEYRTEFMTLL 74
N T N + + +I SNL ++ + ++ RY+E+ KR LPV++ + +F+ ++
Sbjct: 32 NTTTTTTTTNNNYN-NIKSNLTIDQWIPKKETFSKRYYEILEKRKELPVWKQKEDFIKVI 90
Query: 75 AQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQ 134
+NQ ++LVGETGSGKTTQIPQ+ V+ K V TQPRRVAA+SVA+RVSEEMD +
Sbjct: 91 KENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGVTQPRRVAAISVAKRVSEEMDFE 150
Query: 135 LGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDIL 194
LG+EVGYSIRFE+ SS +T +KY+TDGMLLRE MSDP L Y VI+LDEAHERTL+TDIL
Sbjct: 151 LGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMSDPTLNKYDVIILDEAHERTLSTDIL 210
Query: 195 MGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPE 248
G++K+++K+R DLKL++MSATL+AGKFQ+YF+NAPL+ VPGR HPVEIFYT E
Sbjct: 211 FGLIKDILKRRKDLKLIVMSATLEAGKFQKYFENAPLIKVPGRLHPVEIFYTEE 264
Score = 139 (54.0 bits), Expect = 4.0e-81, Sum P(2) = 4.0e-81
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 258 PQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
P CF RP + + AD AK F H DGDHLT+LNVYH+FK+
Sbjct: 524 PNCFMRPKDNRIEADSAKKSFDHFDGDHLTMLNVYHSFKK 563
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 680 (244.4 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 138/245 (56%), Positives = 175/245 (71%)
Query: 7 DVIDPYITKKNREERLATVNASVSTSIASNLQVNPFTGYPYTPRYHELHRKRITLPVFEY 66
D + ++ K R TV + N N F P++ Y ++ R LPV++
Sbjct: 24 DDSEEVVSSKGLTRRATTVAQAAKAEEGPN---NFFNDKPFSQNYFKILETRRELPVYQQ 80
Query: 67 RTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSK--SVGAKAVACTQPRRVAAMSVA 124
R EF+ + +NQ IV VGETGSGKTTQIPQ+ V Y + + +ACTQPRRVAAMSVA
Sbjct: 81 REEFLKIYHENQIIVFVGETGSGKTTQIPQF-VLYDELPHLTNTQIACTQPRRVAAMSVA 139
Query: 125 QRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEA 184
+RV++EMD LG+EVGY+IRFEDCS P T+LKYMTDGMLLRE M+D ML Y I+LDEA
Sbjct: 140 KRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHMLSRYSCIILDEA 199
Query: 185 HERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIF 244
HERTLATDILMG++K + +R DLK+++MSATLDA KFQ+YF +APL+ VPGRT+PVEI+
Sbjct: 200 HERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFDAPLLAVPGRTYPVEIY 259
Query: 245 YTPEP 249
YT EP
Sbjct: 260 YTQEP 264
Score = 147 (56.8 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQRFG 300
+P F RPN A+K AD+ + +F H DGDHLTLLNVYHA+K G
Sbjct: 533 VPNVFVRPNSARKLADEMRQQFTHPDGDHLTLLNVYHAYKSGEG 576
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 694 (249.4 bits), Expect = 2.2e-80, Sum P(2) = 2.2e-80
Identities = 136/210 (64%), Positives = 165/210 (78%)
Query: 40 NPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCV 99
NPFTG+ +T +Y ++ + R LPV R EF+ + Q +V VGETGSGKTTQIPQ+ +
Sbjct: 73 NPFTGHDFTTKYFDILKTRRDLPVHAQREEFLKIFHSTQIMVFVGETGSGKTTQIPQFVL 132
Query: 100 -EYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYM 158
+ + K VACTQPRRVAAMSVA RV++EMD +LG+EVGY+IRFE+ S PKT+LKYM
Sbjct: 133 YDEMPHLTGKQVACTQPRRVAAMSVAARVADEMDVELGEEVGYNIRFENNSGPKTILKYM 192
Query: 159 TDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLD 218
TDGMLLRE M D L Y I+LDEAHERTLATDILMG+LK+V +R DLK++IMSATLD
Sbjct: 193 TDGMLLREAMEDHDLTRYSCIILDEAHERTLATDILMGLLKQVSVRRPDLKIIIMSATLD 252
Query: 219 AGKFQQYFDNAPLMNVPGRTHPVEIFYTPE 248
A KFQ YF+NAPL+ VPGRTHPVEI+YTPE
Sbjct: 253 AEKFQNYFNNAPLLAVPGRTHPVEIYYTPE 282
Score = 132 (51.5 bits), Expect = 2.2e-80, Sum P(2) = 2.2e-80
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAF 295
+P F RP A+K AD+AK+ FA DGDHLTL+NVY AF
Sbjct: 554 VPNVFVRPASARKRADEAKLSFAQADGDHLTLINVYEAF 592
Score = 40 (19.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 165 REGMSDPMLENYQVILLDEAHERTLAT 191
R +++NY+ + EA E +L T
Sbjct: 7 RSNKRQKLIDNYEAEKIAEASEESLRT 33
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 657 (236.3 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 129/211 (61%), Positives = 166/211 (78%)
Query: 40 NPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCV 99
N FTG ++ +Y ++ + R LPV ++R EF+ + + Q +V VGETGSGKTTQIPQ+ V
Sbjct: 86 NAFTGGSHSQQYFKILKTRRNLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQIPQY-V 144
Query: 100 EYSK--SVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKY 157
Y + + K VACTQPRRVAAMSVAQRV++E+D +LGQEVGYSIRFE+ ++P T+LKY
Sbjct: 145 LYDELPHLNKKMVACTQPRRVAAMSVAQRVADELDVELGQEVGYSIRFENKTTPSTILKY 204
Query: 158 MTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATL 217
MTDG LLRE + DP + Y I++DEAHERTLATDILM +LK++ +R+DLK++IMSATL
Sbjct: 205 MTDGQLLRETIHDPNMTRYSCIIIDEAHERTLATDILMALLKQLSLRRSDLKIIIMSATL 264
Query: 218 DAGKFQQYFDNAPLMNVPGRTHPVEIFYTPE 248
DA KFQ+YF AP++ VPGRTHPVEIFYT E
Sbjct: 265 DAAKFQRYFFEAPILAVPGRTHPVEIFYTAE 295
Score = 134 (52.2 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
+PQ F RP +K AD+ K F H++GDHLTLLN YHAFK
Sbjct: 567 VPQVFMRPANNRKRADEMKEHFKHMEGDHLTLLNAYHAFK 606
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 616 (221.9 bits), Expect = 6.9e-68, Sum P(3) = 6.9e-68
Identities = 115/193 (59%), Positives = 150/193 (77%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPR 116
+R +LP+F + + + + NQ ++++GETGSGKTTQI Q+ E + K + CTQPR
Sbjct: 509 QRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCTQPR 567
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENY 176
RVAAMSVA+RVSEE C LGQEVGY+IRFEDC+SP+TV+KYMTDGMLLRE + DP L Y
Sbjct: 568 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 627
Query: 177 QVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
+I+LDEAHERT+ TD+L G+LK+ +++R D+KL++ SATLDA KF QYF AP+ +PG
Sbjct: 628 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 687
Query: 237 RTHPVEIFYTPEP 249
RT+PVEI YT EP
Sbjct: 688 RTYPVEILYTKEP 700
Score = 90 (36.7 bits), Expect = 6.9e-68, Sum P(3) = 6.9e-68
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
F RP + + AD K +F +GDHLTLL VY+++K
Sbjct: 966 FYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWK 1001
Score = 42 (19.8 bits), Expect = 6.9e-68, Sum P(3) = 6.9e-68
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 12 YITKKNREERLATVNASVSTSIASNLQVNPFTG 44
+I++ RE R+A V VS ++V FTG
Sbjct: 276 HISELRREGRVANVADVVSKGQRVKVKVLSFTG 308
Score = 37 (18.1 bits), Expect = 2.5e-62, Sum P(3) = 2.5e-62
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 253 AGPWLPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLN 290
+ PW + F + ++A D K +D L +++
Sbjct: 1006 SNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1043
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 614 (221.2 bits), Expect = 1.3e-67, Sum P(3) = 1.3e-67
Identities = 114/193 (59%), Positives = 151/193 (78%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPR 116
+R +LP+++ + + + + NQ ++++GETGSGKTTQI Q+ E + K + CTQPR
Sbjct: 561 QRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCTQPR 619
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENY 176
RVAAMSVA+RVSEE C LGQEVGY+IRFEDC+SP+TV+KYMTDGMLLRE + DP L Y
Sbjct: 620 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 679
Query: 177 QVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
+I+LDEAHERT+ TD+L G+LK+ +++R D+KL++ SATLDA KF QYF AP+ +PG
Sbjct: 680 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 739
Query: 237 RTHPVEIFYTPEP 249
RT+PVEI YT EP
Sbjct: 740 RTYPVEILYTKEP 752
Score = 90 (36.7 bits), Expect = 1.3e-67, Sum P(3) = 1.3e-67
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
F RP + + AD K +F +GDHLTLL VY+++K
Sbjct: 1018 FYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWK 1053
Score = 42 (19.8 bits), Expect = 1.3e-67, Sum P(3) = 1.3e-67
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 12 YITKKNREERLATVNASVSTSIASNLQVNPFTG 44
+I++ RE R+A V VS ++V FTG
Sbjct: 296 HISELRREGRVANVADVVSKGQRVKVKVLSFTG 328
Score = 37 (18.1 bits), Expect = 4.6e-62, Sum P(3) = 4.6e-62
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 253 AGPWLPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLN 290
+ PW + F + ++A D K +D L +++
Sbjct: 1058 SNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1095
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 614 (221.2 bits), Expect = 1.6e-67, Sum P(3) = 1.6e-67
Identities = 114/193 (59%), Positives = 151/193 (78%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPR 116
+R +LP+++ + + + + NQ ++++GETGSGKTTQI Q+ E + K + CTQPR
Sbjct: 530 QRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCTQPR 588
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENY 176
RVAAMSVA+RVSEE C LGQEVGY+IRFEDC+SP+TV+KYMTDGMLLRE + DP L Y
Sbjct: 589 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 648
Query: 177 QVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
+I+LDEAHERT+ TD+L G+LK+ +++R D+KL++ SATLDA KF QYF AP+ +PG
Sbjct: 649 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 708
Query: 237 RTHPVEIFYTPEP 249
RT+PVEI YT EP
Sbjct: 709 RTYPVEILYTKEP 721
Score = 90 (36.7 bits), Expect = 1.6e-67, Sum P(3) = 1.6e-67
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
F RP + + AD K +F +GDHLTLL VY+++K
Sbjct: 987 FYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWK 1022
Score = 42 (19.8 bits), Expect = 1.6e-67, Sum P(3) = 1.6e-67
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 12 YITKKNREERLATVNASVSTSIASNLQVNPFTG 44
+I++ RE R+A V VS ++V FTG
Sbjct: 265 HISELRREGRVANVADVVSKGQRVKVKVLSFTG 297
Score = 37 (18.1 bits), Expect = 5.8e-62, Sum P(3) = 5.8e-62
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 253 AGPWLPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLN 290
+ PW + F + ++A D K +D L +++
Sbjct: 1027 SNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1064
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 614 (221.2 bits), Expect = 1.7e-67, Sum P(3) = 1.7e-67
Identities = 114/193 (59%), Positives = 151/193 (78%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPR 116
+R +LP+++ + + + + NQ ++++GETGSGKTTQI Q+ E + K + CTQPR
Sbjct: 553 QRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCTQPR 611
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENY 176
RVAAMSVA+RVSEE C LGQEVGY+IRFEDC+SP+TV+KYMTDGMLLRE + DP L Y
Sbjct: 612 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 671
Query: 177 QVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
+I+LDEAHERT+ TD+L G+LK+ +++R D+KL++ SATLDA KF QYF AP+ +PG
Sbjct: 672 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 731
Query: 237 RTHPVEIFYTPEP 249
RT+PVEI YT EP
Sbjct: 732 RTYPVEILYTKEP 744
Score = 90 (36.7 bits), Expect = 1.7e-67, Sum P(3) = 1.7e-67
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
F RP + + AD K +F +GDHLTLL VY+++K
Sbjct: 1010 FYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWK 1045
Score = 42 (19.8 bits), Expect = 1.7e-67, Sum P(3) = 1.7e-67
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 12 YITKKNREERLATVNASVSTSIASNLQVNPFTG 44
+I++ RE R+A V VS ++V FTG
Sbjct: 288 HISELRREGRVANVADVVSKGQRVKVKVLSFTG 320
Score = 37 (18.1 bits), Expect = 5.9e-62, Sum P(3) = 5.9e-62
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 253 AGPWLPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLN 290
+ PW + F + ++A D K +D L +++
Sbjct: 1050 SNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1087
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 614 (221.2 bits), Expect = 1.7e-67, Sum P(3) = 1.7e-67
Identities = 114/193 (59%), Positives = 151/193 (78%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPR 116
+R +LP+++ + + + + NQ ++++GETGSGKTTQI Q+ E + K + CTQPR
Sbjct: 557 QRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCTQPR 615
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENY 176
RVAAMSVA+RVSEE C LGQEVGY+IRFEDC+SP+TV+KYMTDGMLLRE + DP L Y
Sbjct: 616 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 675
Query: 177 QVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
+I+LDEAHERT+ TD+L G+LK+ +++R D+KL++ SATLDA KF QYF AP+ +PG
Sbjct: 676 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 735
Query: 237 RTHPVEIFYTPEP 249
RT+PVEI YT EP
Sbjct: 736 RTYPVEILYTKEP 748
Score = 90 (36.7 bits), Expect = 1.7e-67, Sum P(3) = 1.7e-67
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
F RP + + AD K +F +GDHLTLL VY+++K
Sbjct: 1014 FYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWK 1049
Score = 42 (19.8 bits), Expect = 1.7e-67, Sum P(3) = 1.7e-67
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 12 YITKKNREERLATVNASVSTSIASNLQVNPFTG 44
+I++ RE R+A V VS ++V FTG
Sbjct: 292 HISELRREGRVANVADVVSKGQRVKVKVLSFTG 324
Score = 37 (18.1 bits), Expect = 6.1e-62, Sum P(3) = 6.1e-62
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 253 AGPWLPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLN 290
+ PW + F + ++A D K +D L +++
Sbjct: 1054 SNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1091
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 614 (221.2 bits), Expect = 1.8e-67, Sum P(3) = 1.8e-67
Identities = 114/193 (59%), Positives = 151/193 (78%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPR 116
+R +LP+++ + + + + NQ ++++GETGSGKTTQI Q+ E + K + CTQPR
Sbjct: 561 QRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCTQPR 619
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENY 176
RVAAMSVA+RVSEE C LGQEVGY+IRFEDC+SP+TV+KYMTDGMLLRE + DP L Y
Sbjct: 620 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 679
Query: 177 QVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
+I+LDEAHERT+ TD+L G+LK+ +++R D+KL++ SATLDA KF QYF AP+ +PG
Sbjct: 680 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 739
Query: 237 RTHPVEIFYTPEP 249
RT+PVEI YT EP
Sbjct: 740 RTYPVEILYTKEP 752
Score = 90 (36.7 bits), Expect = 1.8e-67, Sum P(3) = 1.8e-67
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
F RP + + AD K +F +GDHLTLL VY+++K
Sbjct: 1018 FYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWK 1053
Score = 42 (19.8 bits), Expect = 1.8e-67, Sum P(3) = 1.8e-67
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 12 YITKKNREERLATVNASVSTSIASNLQVNPFTG 44
+I++ RE R+A V VS ++V FTG
Sbjct: 296 HISELRREGRVANVADVVSKGQRVKVKVLSFTG 328
Score = 37 (18.1 bits), Expect = 6.3e-62, Sum P(3) = 6.3e-62
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 253 AGPWLPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLN 290
+ PW + F + ++A D K +D L +++
Sbjct: 1058 SNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1095
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 614 (221.2 bits), Expect = 1.9e-67, Sum P(3) = 1.9e-67
Identities = 114/193 (59%), Positives = 151/193 (78%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPR 116
+R +LP+++ + + + + NQ ++++GETGSGKTTQI Q+ E + K + CTQPR
Sbjct: 571 QRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCTQPR 629
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENY 176
RVAAMSVA+RVSEE C LGQEVGY+IRFEDC+SP+TV+KYMTDGMLLRE + DP L Y
Sbjct: 630 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 689
Query: 177 QVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
+I+LDEAHERT+ TD+L G+LK+ +++R D+KL++ SATLDA KF QYF AP+ +PG
Sbjct: 690 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 749
Query: 237 RTHPVEIFYTPEP 249
RT+PVEI YT EP
Sbjct: 750 RTYPVEILYTKEP 762
Score = 90 (36.7 bits), Expect = 1.9e-67, Sum P(3) = 1.9e-67
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
F RP + + AD K +F +GDHLTLL VY+++K
Sbjct: 1028 FYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWK 1063
Score = 42 (19.8 bits), Expect = 1.9e-67, Sum P(3) = 1.9e-67
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 12 YITKKNREERLATVNASVSTSIASNLQVNPFTG 44
+I++ RE R+A V VS ++V FTG
Sbjct: 306 HISELRREGRVANVADVVSKGQRVKVKVLSFTG 338
Score = 37 (18.1 bits), Expect = 6.8e-62, Sum P(3) = 6.8e-62
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 253 AGPWLPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLN 290
+ PW + F + ++A D K +D L +++
Sbjct: 1068 SNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1105
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 614 (221.2 bits), Expect = 2.1e-67, Sum P(3) = 2.1e-67
Identities = 114/193 (59%), Positives = 151/193 (78%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPR 116
+R +LP+++ + + + + NQ ++++GETGSGKTTQI Q+ E + K + CTQPR
Sbjct: 583 QRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCTQPR 641
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENY 176
RVAAMSVA+RVSEE C LGQEVGY+IRFEDC+SP+TV+KYMTDGMLLRE + DP L Y
Sbjct: 642 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 701
Query: 177 QVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
+I+LDEAHERT+ TD+L G+LK+ +++R D+KL++ SATLDA KF QYF AP+ +PG
Sbjct: 702 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 761
Query: 237 RTHPVEIFYTPEP 249
RT+PVEI YT EP
Sbjct: 762 RTYPVEILYTKEP 774
Score = 90 (36.7 bits), Expect = 2.1e-67, Sum P(3) = 2.1e-67
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
F RP + + AD K +F +GDHLTLL VY+++K
Sbjct: 1040 FYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWK 1075
Score = 42 (19.8 bits), Expect = 2.1e-67, Sum P(3) = 2.1e-67
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 12 YITKKNREERLATVNASVSTSIASNLQVNPFTG 44
+I++ RE R+A V VS ++V FTG
Sbjct: 318 HISELRREGRVANVADVVSKGQRVKVKVLSFTG 350
Score = 37 (18.1 bits), Expect = 7.4e-62, Sum P(3) = 7.4e-62
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 253 AGPWLPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLN 290
+ PW + F + ++A D K +D L +++
Sbjct: 1080 SNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1117
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 614 (221.2 bits), Expect = 2.1e-67, Sum P(3) = 2.1e-67
Identities = 114/193 (59%), Positives = 151/193 (78%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPR 116
+R +LP+++ + + + + NQ ++++GETGSGKTTQI Q+ E + K + CTQPR
Sbjct: 585 QRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCTQPR 643
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENY 176
RVAAMSVA+RVSEE C LGQEVGY+IRFEDC+SP+TV+KYMTDGMLLRE + DP L Y
Sbjct: 644 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 703
Query: 177 QVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
+I+LDEAHERT+ TD+L G+LK+ +++R D+KL++ SATLDA KF QYF AP+ +PG
Sbjct: 704 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 763
Query: 237 RTHPVEIFYTPEP 249
RT+PVEI YT EP
Sbjct: 764 RTYPVEILYTKEP 776
Score = 90 (36.7 bits), Expect = 2.1e-67, Sum P(3) = 2.1e-67
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
F RP + + AD K +F +GDHLTLL VY+++K
Sbjct: 1042 FYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWK 1077
Score = 42 (19.8 bits), Expect = 2.1e-67, Sum P(3) = 2.1e-67
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 12 YITKKNREERLATVNASVSTSIASNLQVNPFTG 44
+I++ RE R+A V VS ++V FTG
Sbjct: 320 HISELRREGRVANVADVVSKGQRVKVKVLSFTG 352
Score = 37 (18.1 bits), Expect = 7.5e-62, Sum P(3) = 7.5e-62
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 253 AGPWLPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLN 290
+ PW + F + ++A D K +D L +++
Sbjct: 1082 SNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1119
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 614 (221.2 bits), Expect = 2.7e-67, Sum P(3) = 2.7e-67
Identities = 113/193 (58%), Positives = 151/193 (78%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPR 116
+R +LP+++ + + + + NQ ++++GETGSGKTTQI Q+ E + K + CTQPR
Sbjct: 551 QRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGK-IGCTQPR 609
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENY 176
RVAAMSVA+RVSEE C LGQEVGY+IRFEDC+SP+TV+KYMTDGMLLRE + DP L Y
Sbjct: 610 RVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLGQY 669
Query: 177 QVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
+I+LDEAHERT+ TD+L G+LK+ +++R D+KL++ SATLDA KF QYF AP+ +PG
Sbjct: 670 AIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 729
Query: 237 RTHPVEIFYTPEP 249
RT+PVE+ YT EP
Sbjct: 730 RTYPVEVLYTKEP 742
Score = 88 (36.0 bits), Expect = 2.7e-67, Sum P(3) = 2.7e-67
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
F RP + + AD K +F +GDHLTLL VY+++K
Sbjct: 1008 FYRPKDKQALADQKKAKFHQPEGDHLTLLAVYNSWK 1043
Score = 42 (19.8 bits), Expect = 2.7e-67, Sum P(3) = 2.7e-67
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 12 YITKKNREERLATVNASVSTSIASNLQVNPFTG 44
+I++ RE R+A V VS ++V FTG
Sbjct: 286 HISELRREGRVANVADVVSKGQRVKVKVLSFTG 318
Score = 37 (18.1 bits), Expect = 5.8e-62, Sum P(3) = 5.8e-62
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 253 AGPWLPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLN 290
+ PW + F + ++A D K +D L +++
Sbjct: 1048 SNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1085
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 598 (215.6 bits), Expect = 4.0e-66, Sum P(2) = 4.0e-66
Identities = 111/196 (56%), Positives = 150/196 (76%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACT 113
+ ++R +LPVF +R + + + +NQ +++VGETGSGKTTQ+ Q+ E + + CT
Sbjct: 535 IKQQRESLPVFAFREQLIKAVKENQIMIVVGETGSGKTTQLTQYLAE-AGFANEGVIGCT 593
Query: 114 QPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPML 173
QPRRVAAMSVA+RVSEE+ C+LGQEVGY+IRFEDC+SP T +KYMTDGML RE + DP L
Sbjct: 594 QPRRVAAMSVAKRVSEEVGCELGQEVGYTIRFEDCTSPATRIKYMTDGMLQREIVIDPDL 653
Query: 174 ENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMN 233
+ Y VI+LDEAHERT+ATD+L +LK+ ++R DLK+++ SATLDA KF YF+ P+
Sbjct: 654 KRYSVIMLDEAHERTIATDVLFALLKKATRRRPDLKIIVTSATLDADKFSAYFNECPIFT 713
Query: 234 VPGRTHPVEIFYTPEP 249
+PGRT PVEI Y+ +P
Sbjct: 714 IPGRTFPVEILYSKDP 729
Score = 113 (44.8 bits), Expect = 4.0e-66, Sum P(2) = 4.0e-66
Identities = 23/41 (56%), Positives = 28/41 (68%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
LP F RP E + AD K +F +GDHLTLLNVY+A+KQ
Sbjct: 991 LPNVFYRPKEKQTQADAKKAKFHDPNGDHLTLLNVYNAWKQ 1031
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 607 (218.7 bits), Expect = 9.2e-66, Sum P(2) = 9.2e-66
Identities = 111/196 (56%), Positives = 154/196 (78%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACT 113
+ ++R +LPV+++R + + +A+NQ +++VG+TGSGKTTQ+ Q+ E + + CT
Sbjct: 570 IKQQRESLPVYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQYLAEAGWA-NKGIIGCT 628
Query: 114 QPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPML 173
QPRRVAAMSVA+RV+EE+ C+LG EVGY+IRFEDC+SP+T +KYMTDGML RE + DP L
Sbjct: 629 QPRRVAAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPETKIKYMTDGMLQREVLLDPDL 688
Query: 174 ENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMN 233
+ Y VI+LDEAHERT+ATD+L G+LK +K+R DL+L++ SATLDA KF +YF P+ +
Sbjct: 689 KKYSVIMLDEAHERTIATDVLFGLLKTTLKRRPDLRLIVTSATLDADKFSEYFYGCPIFS 748
Query: 234 VPGRTHPVEIFYTPEP 249
+PGRT PVEI Y+ EP
Sbjct: 749 IPGRTFPVEIMYSKEP 764
Score = 101 (40.6 bits), Expect = 9.2e-66, Sum P(2) = 9.2e-66
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
F RP E ++ AD K +F GDHLTLLNVY+A+K+
Sbjct: 1030 FYRPKEKQQQADQKKAKFHDPHGDHLTLLNVYNAWKR 1066
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 604 (217.7 bits), Expect = 2.8e-64, Sum P(2) = 2.8e-64
Identities = 112/196 (57%), Positives = 152/196 (77%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACT 113
L +R +LP+++ R + + + NQ ++++GETGSGKTTQI Q+ E + K + CT
Sbjct: 579 LVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGK-IGCT 637
Query: 114 QPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPML 173
QPRRVAAMSVA+RV+EE C+LGQEVGY+IRFEDC+SP+T++KYMTDGMLLRE + + L
Sbjct: 638 QPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAEL 697
Query: 174 ENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMN 233
++Y VI+LDEAHERT+ TD+L G+LK +++R +LKL++ SATLDA KF QYF AP+
Sbjct: 698 KSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFT 757
Query: 234 VPGRTHPVEIFYTPEP 249
+PGRT PVE+ YT EP
Sbjct: 758 IPGRTFPVEVLYTKEP 773
Score = 90 (36.7 bits), Expect = 2.8e-64, Sum P(2) = 2.8e-64
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
F RP + + AD K +F +GDHLTLL VY+++K
Sbjct: 1039 FYRPKDKQALADQKKAKFNQAEGDHLTLLAVYNSWK 1074
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 594 (214.2 bits), Expect = 4.3e-64, Sum P(2) = 4.3e-64
Identities = 111/196 (56%), Positives = 150/196 (76%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACT 113
+ +R LPVF+ R +F+ +++NQ +VL+GETGSGKTTQI Q+ E + +K + CT
Sbjct: 503 MKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCT 562
Query: 114 QPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPML 173
QPRRVAAMSVA+RV+EE+ C++G+EVGY+IRFED +S T +KYMTDGML RE + DP+L
Sbjct: 563 QPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLL 622
Query: 174 ENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMN 233
Y VI+LDEAHERT+ATD+L G+LK + +R DLKL++ SATLDA +F YF P+
Sbjct: 623 SKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCPIFT 682
Query: 234 VPGRTHPVEIFYTPEP 249
+PGR++PVEI YT +P
Sbjct: 683 IPGRSYPVEIMYTKQP 698
Score = 97 (39.2 bits), Expect = 4.3e-64, Sum P(2) = 4.3e-64
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
+P ++RP E ++ AD + +FA+ + DHLTLLNVY +K
Sbjct: 960 VPNIWSRPREKQQEADRQRAQFANPESDHLTLLNVYTTWK 999
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 592 (213.5 bits), Expect = 5.3e-64, Sum P(2) = 5.3e-64
Identities = 110/196 (56%), Positives = 153/196 (78%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACT 113
+ +R +LP+F R F+ ++++Q +V++GETGSGKTTQ+ Q+ E K + CT
Sbjct: 501 IKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGK-IGCT 559
Query: 114 QPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPML 173
QPRRVAAMSV++RV+EE CQLGQEVGY+IRFEDC+SP+T++K+MTDG+LLRE + DP L
Sbjct: 560 QPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPNL 619
Query: 174 ENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMN 233
Y VI+LDEAHERT++TD+L G+LK+ +++R +LK++I SATL+A KF +YF NA L
Sbjct: 620 SAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMNAQLFI 679
Query: 234 VPGRTHPVEIFYTPEP 249
+PGRT PV+I YT +P
Sbjct: 680 IPGRTFPVDIRYTKDP 695
Score = 98 (39.6 bits), Expect = 5.3e-64, Sum P(2) = 5.3e-64
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
F RP E + AD K +F +GDHLTLLNVY ++K
Sbjct: 961 FYRPKEKQALADQKKAKFFQPEGDHLTLLNVYESWK 996
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 593 (213.8 bits), Expect = 1.7e-63, Sum P(2) = 1.7e-63
Identities = 114/208 (54%), Positives = 154/208 (74%)
Query: 49 PRYHELHRKRITL-------PVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEY 101
P E RKR+TL PV+ ++ + + + ++Q +++ GETGSGKTTQ+PQ+ VE
Sbjct: 233 PELTEKERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEA 292
Query: 102 SKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDG 161
+ K + CTQPRRVAAMSVA RV+EEM +LG EVGYSIRFEDC+S +T+LKYMTDG
Sbjct: 293 GFTKDKKMIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDG 352
Query: 162 MLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGK 221
L RE +S+P L +Y V+++DEAHERTL TDIL G++K++ + R +LKL+I SATLDA K
Sbjct: 353 TLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEK 412
Query: 222 FQQYFDNAPLMNVPGRTHPVEIFYTPEP 249
F +FD+AP+ +PGR +PV+IFYT P
Sbjct: 413 FSAFFDDAPIFRIPGRRYPVDIFYTKAP 440
Score = 81 (33.6 bits), Expect = 1.7e-63, Sum P(2) = 1.7e-63
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
F RP + AD A+ F H+ GDHL+LL VY+ + +
Sbjct: 707 FYRPKDKIIHADTARKNFNHMHGDHLSLLQVYNQWAE 743
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 603 (217.3 bits), Expect = 2.4e-63, Sum P(2) = 2.4e-63
Identities = 117/197 (59%), Positives = 151/197 (76%)
Query: 53 ELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVAC 112
EL R +LP++ YR + + + ++Q +V+VG+TGSGKTTQIPQ+ E + K V C
Sbjct: 396 ELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGK-VGC 454
Query: 113 TQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPM 172
TQPRRVAAMSVA RV++EM +LG EVGYSIRFEDC+S KTVLKYMTDGMLLRE + +P
Sbjct: 455 TQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPD 514
Query: 173 LENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLM 232
L +Y V+++DEAHERTL+TDIL G++K++ + R DLKL+I SAT+DA KF YFD AP+
Sbjct: 515 LASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIF 574
Query: 233 NVPGRTHPVEIFYTPEP 249
+ PGR +PVEI YT P
Sbjct: 575 SFPGRRYPVEINYTSAP 591
Score = 77 (32.2 bits), Expect = 2.4e-63, Sum P(2) = 2.4e-63
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 261 FTRPNEAKKAADDAKMRFAHID--GDHLTLLNVYHAFKQ 297
F RP + + AD+A+M F H GDH+ LL VY ++K+
Sbjct: 858 FYRPKDKQVHADNARMNF-HTGNVGDHIALLKVYSSWKE 895
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 599 (215.9 bits), Expect = 2.8e-63, Sum P(2) = 2.8e-63
Identities = 109/192 (56%), Positives = 148/192 (77%)
Query: 58 RITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRR 117
R +LP+F YR + + + +Q +V+ GETGSGKTTQIPQ+ +E + G + CTQPRR
Sbjct: 409 RRSLPIFPYREDLLAAIGDHQILVIEGETGSGKTTQIPQYLLEEGYTKGGMKIGCTQPRR 468
Query: 118 VAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQ 177
VAAMSVA RV++EM +LG EVGYSIRFEDC+S +T+LKYMTDGMLLRE +++P L +Y
Sbjct: 469 VAAMSVAARVAQEMSVKLGNEVGYSIRFEDCTSERTILKYMTDGMLLREFLTEPDLASYS 528
Query: 178 VILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGR 237
VI++DEAHERTL TDIL G++K++ + R DLK+++ SATLD +F +FD+AP+ +PGR
Sbjct: 529 VIIIDEAHERTLHTDILFGLIKDIARFRPDLKVLVASATLDTERFSSFFDDAPVFRIPGR 588
Query: 238 THPVEIFYTPEP 249
PV+I+YT P
Sbjct: 589 RFPVDIYYTKAP 600
Score = 81 (33.6 bits), Expect = 2.8e-63, Sum P(2) = 2.8e-63
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVY 292
F RP + AD+A+M F GDHL LLNVY
Sbjct: 867 FYRPKDKVVHADNARMNFVVPGGDHLVLLNVY 898
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 604 (217.7 bits), Expect = 3.0e-63, Sum P(2) = 3.0e-63
Identities = 122/223 (54%), Positives = 165/223 (73%)
Query: 34 ASNLQVN--PFTGYPYTPRYHE---LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGS 88
A+ LQ + P +G P + + + + R +LPVF +R E +T +A +Q +++ GETGS
Sbjct: 370 AAQLQGDEEPSSGPPLSAQAQQKESIQAVRRSLPVFPFREELLTAIANHQVLIIEGETGS 429
Query: 89 GKTTQIPQWCVE--YSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFE 146
GKTTQIPQ+ E Y+K G K +ACTQPRRVAAMSVA RV+ EM +LG EVGYSIRFE
Sbjct: 430 GKTTQIPQYLFEEGYTKK-GMK-IACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFE 487
Query: 147 DCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRA 206
DC+S +TVL+YMTDGMLLRE +S+P L +Y V+++DEAHERTL TDIL G++K+V + R
Sbjct: 488 DCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRP 547
Query: 207 DLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEP 249
+LK+++ SATLD +F +FD+AP+ +PGR PV+IFYT P
Sbjct: 548 ELKVLVASATLDTARFSAFFDDAPVFRIPGRRFPVDIFYTKAP 590
Score = 75 (31.5 bits), Expect = 3.0e-63, Sum P(2) = 3.0e-63
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVY 292
F RP + AD+A++ F GDHL LLNVY
Sbjct: 857 FYRPKDKVVHADNARVNFFLPGGDHLVLLNVY 888
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 606 (218.4 bits), Expect = 3.4e-63, Sum P(2) = 3.4e-63
Identities = 112/196 (57%), Positives = 151/196 (77%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACT 113
+ R +LPV+ +R F+ + ++Q +++ GETGSGKTTQ+PQ+ E G K + CT
Sbjct: 357 IEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCT 416
Query: 114 QPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPML 173
QPRRVAAMSVA RV++E+ C+LG +VGYSIRFEDC+S KTVLKYMTDGMLLRE +++P L
Sbjct: 417 QPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDL 476
Query: 174 ENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMN 233
+Y V+++DEAHERTL TDIL G++K++ + R DLKL+I SATLDA KF +FD+AP+
Sbjct: 477 ASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFR 536
Query: 234 VPGRTHPVEIFYTPEP 249
+PGR PV+I+YT P
Sbjct: 537 IPGRRFPVDIYYTQAP 552
Score = 71 (30.1 bits), Expect = 3.4e-63, Sum P(2) = 3.4e-63
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
F RP AD A+ F GDH+TL+NVY+ +++
Sbjct: 820 FYRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQE 856
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 606 (218.4 bits), Expect = 3.4e-63, Sum P(2) = 3.4e-63
Identities = 112/196 (57%), Positives = 151/196 (77%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACT 113
+ R +LPV+ +R F+ + ++Q +++ GETGSGKTTQ+PQ+ E G K + CT
Sbjct: 357 IEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCT 416
Query: 114 QPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPML 173
QPRRVAAMSVA RV++E+ C+LG +VGYSIRFEDC+S KTVLKYMTDGMLLRE +++P L
Sbjct: 417 QPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDL 476
Query: 174 ENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMN 233
+Y V+++DEAHERTL TDIL G++K++ + R DLKL+I SATLDA KF +FD+AP+
Sbjct: 477 ASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFR 536
Query: 234 VPGRTHPVEIFYTPEP 249
+PGR PV+I+YT P
Sbjct: 537 IPGRRFPVDIYYTQAP 552
Score = 71 (30.1 bits), Expect = 3.4e-63, Sum P(2) = 3.4e-63
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
F RP AD A+ F GDH+TL+NVY+ +++
Sbjct: 820 FYRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQE 856
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 608 (219.1 bits), Expect = 3.6e-63, Sum P(2) = 3.6e-63
Identities = 114/200 (57%), Positives = 153/200 (76%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
R + R +LP++ YR EF+ L Q Q +V+VGETGSGKTTQ+PQ+ E +
Sbjct: 362 RQLSMQETRKSLPIYVYRDEFLAALEQYQILVIVGETGSGKTTQLPQYLHEAGYTKDGMR 421
Query: 110 VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS 169
V CTQPRRVAAMSVA RV++EM ++G EVGYSIRFED +S KT+LKYMTDGMLLRE M+
Sbjct: 422 VGCTQPRRVAAMSVAARVADEMGVKVGNEVGYSIRFEDNTSDKTILKYMTDGMLLREFMT 481
Query: 170 DPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNA 229
+P L +Y +++DEAHERT+ TDIL+ ++K++ ++R DLKL+I SAT++A KF YFD+A
Sbjct: 482 EPDLSSYSALMIDEAHERTVHTDILLALVKDLARERKDLKLLISSATMNAEKFASYFDDA 541
Query: 230 PLMNVPGRTHPVEIFYTPEP 249
P+ N+PGR +PV+I+YTP P
Sbjct: 542 PIFNIPGRRYPVDIYYTPAP 561
Score = 69 (29.3 bits), Expect = 3.6e-63, Sum P(2) = 3.6e-63
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDG-DHLTLLNVYH 293
F RP + + AD A+ RF +G DH+TLLN+++
Sbjct: 828 FFRPKDKQVHADAARGRFTVKEGGDHVTLLNIWN 861
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 591 (213.1 bits), Expect = 3.9e-63, Sum P(2) = 3.9e-63
Identities = 110/196 (56%), Positives = 148/196 (75%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACT 113
+ +R +LP+++ + E + + NQ +V++GETGSGKTTQ+ Q+ E + K + CT
Sbjct: 508 IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGK-IGCT 566
Query: 114 QPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPML 173
QPRRVAAMSVA+RV+EE C+LG+EVGY+IRFEDC+ P TV+KYMTDGMLLRE + D L
Sbjct: 567 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 626
Query: 174 ENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMN 233
Y VI+LDEAHERT+ TD+L G+LK+++K+R DL+L++ SATLDA KF YF N +
Sbjct: 627 SQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFT 686
Query: 234 VPGRTHPVEIFYTPEP 249
+PGRT PVEI YT +P
Sbjct: 687 IPGRTFPVEILYTKQP 702
Score = 91 (37.1 bits), Expect = 3.9e-63, Sum P(2) = 3.9e-63
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQR 298
F RP E + AD + +F +GDHLTLL VY A+K +
Sbjct: 968 FYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAK 1005
Score = 40 (19.1 bits), Expect = 9.1e-58, Sum P(2) = 9.1e-58
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 253 AGPWLPQCFTRPNEAKKAADDAKMRFAHID 282
+GPW + F + ++A D K + +D
Sbjct: 1008 SGPWCFENFIQSRSLRRAQDVRKQLLSIMD 1037
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 605 (218.0 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
Identities = 113/196 (57%), Positives = 154/196 (78%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACT 113
L R +LPV++Y+ + + + + Q +++V ETGSGKTTQ+PQ+ E + G K + CT
Sbjct: 411 LESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCT 470
Query: 114 QPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPML 173
QPRRVAAMSVA RV++EMD +LGQEVGYSIRFE+ +S KTV+KY+TDGMLLRE +++P L
Sbjct: 471 QPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDL 530
Query: 174 ENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMN 233
+Y VI++DEAHERTL TDIL G++K++ + R DLK++I SAT+DA KF YFD AP+
Sbjct: 531 ASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFY 590
Query: 234 VPGRTHPVEIFYTPEP 249
VPGR +PV+I+YTP+P
Sbjct: 591 VPGRRYPVDIYYTPQP 606
Score = 72 (30.4 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYH 293
F RP + AD A+ F GDHLTLL++++
Sbjct: 873 FYRPKDKIMEADKARANFTQPGGDHLTLLHIWN 905
>UNIPROTKB|H9KZI9 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00575 PROSITE:PS00690
PROSITE:PS50126 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 EMBL:AADN02006936
Ensembl:ENSGALT00000013764 OMA:CRERERG Uniprot:H9KZI9
Length = 692
Score = 616 (221.9 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 115/193 (59%), Positives = 150/193 (77%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPR 116
+R +LP+F + + + + NQ ++++GETGSGKTTQI Q+ E + K + CTQPR
Sbjct: 471 QRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCTQPR 529
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENY 176
RVAAMSVA+RVSEE C LGQEVGY+IRFEDC+SP+TV+KYMTDGMLLRE + DP L Y
Sbjct: 530 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 589
Query: 177 QVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
+I+LDEAHERT+ TD+L G+LK+ +++R D+KL++ SATLDA KF QYF AP+ +PG
Sbjct: 590 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 649
Query: 237 RTHPVEIFYTPEP 249
RT+PVEI YT EP
Sbjct: 650 RTYPVEILYTKEP 662
Score = 42 (19.8 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 12 YITKKNREERLATVNASVSTSIASNLQVNPFTG 44
+I++ RE R+A V VS ++V FTG
Sbjct: 206 HISELRREGRVANVADVVSKGQRVKVKVLSFTG 238
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 598 (215.6 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 121/222 (54%), Positives = 160/222 (72%)
Query: 34 ASNLQVNPFTGYPYTP----RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSG 89
A+ LQ N P P + + R +LPVF +R E + +A +Q +++ GETGSG
Sbjct: 369 ATQLQGNEEPSGPSPPSQAQQKESVQAVRRSLPVFPFREELLAAIADHQVLIIEGETGSG 428
Query: 90 KTTQIPQWCVE--YSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFED 147
KTTQIPQ+ E Y+K G K +ACTQPRRVAAMSVA RV+ EM +LG EVGYSIRFED
Sbjct: 429 KTTQIPQYLFEEGYTKK-GMK-IACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFED 486
Query: 148 CSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRAD 207
C+S +TVL+YMTDGMLLRE +S+P L +Y V+++DEAHERTL TDIL G++K+V + R +
Sbjct: 487 CTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPE 546
Query: 208 LKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEP 249
LK+++ SATLD +F +FD+AP+ +PGR PV+IFYT P
Sbjct: 547 LKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAP 588
Score = 75 (31.5 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVY 292
F RP + AD+A++ F GDHL LLNVY
Sbjct: 855 FYRPKDKVVHADNARVNFFLPGGDHLVLLNVY 886
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 580 (209.2 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 110/201 (54%), Positives = 147/201 (73%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKS-VGA--KAV 110
+ +R LPV+ R++ + + NQ +V+VGETGSGKTTQI Q+ E + VG K +
Sbjct: 329 IQEQRRMLPVYAMRSQLLEAIRDNQFVVIVGETGSGKTTQIVQYIYEEGMNKVGGQTKLI 388
Query: 111 ACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSD 170
CTQPRRVAA SVA+RVSEE+ C+LG VGY+IRFED +S TV+KYMTDGML RE ++D
Sbjct: 389 GCTQPRRVAAESVAKRVSEEVGCKLGDTVGYTIRFEDVTSENTVIKYMTDGMLEREALND 448
Query: 171 PMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAP 230
P + Y VI+LDEAHERT+ATD+L +LK KQ +LK+++ SATLD+ KF +YF+N P
Sbjct: 449 PNMNRYSVIMLDEAHERTIATDVLFALLKNAAKQNPNLKVIVTSATLDSNKFSRYFNNCP 508
Query: 231 LMNVPGRTHPVEIFYTPEPPL 251
++ +PGRT PVE+ YT P +
Sbjct: 509 IITIPGRTFPVEVLYTKAPEM 529
Score = 92 (37.4 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAF 295
F RP + + AD K RF H GDHLTLLNV+ ++
Sbjct: 793 FYRPKDKQALADQRKSRFHHSLGDHLTLLNVFQSW 827
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 597 (215.2 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 121/235 (51%), Positives = 162/235 (68%)
Query: 19 EERLATVNASV--STSIASNLQVNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQ 76
E+++ + ASV + + P +H L R LP++ YR + + +
Sbjct: 360 EDQIDFIKASVLAGDNYEDEMHAKPSQDSAGKSAFHMLQEDRKALPIYTYRDQLLNAVKD 419
Query: 77 NQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQ 134
+Q +++VGETGSGKTTQIPQ+ E Y+K +G V CTQPRRVAAMSVA RV++EM +
Sbjct: 420 HQVLIIVGETGSGKTTQIPQYLHEAGYTK-LGK--VGCTQPRRVAAMSVAARVAQEMGGK 476
Query: 135 LGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDIL 194
LG EVGYSIRFEDC+S KT+LKYMTDGMLLRE + +P L +Y VI++DEAHERTL TDIL
Sbjct: 477 LGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDIL 536
Query: 195 MGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEP 249
G++K++ + R DLKL+I SAT+DA KF +FD AP+ PGR +PV+I +T P
Sbjct: 537 FGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDICFTTAP 591
Score = 75 (31.5 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 258 PQCFTRPNEAKKAADDAKMRFAHID--GDHLTLLNVYHAFKQ 297
P F RP + + AD+A F H+ GDH+ L +Y+++K+
Sbjct: 855 PSIFYRPKDKQVHADNAMKNF-HVGNVGDHIAFLKIYNSWKE 895
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 597 (215.2 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 115/194 (59%), Positives = 151/194 (77%)
Query: 58 RITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAKAVACTQP 115
R +LPVF +R E + +A +Q +++ GETGSGKTTQIPQ+ E Y+K G K +ACTQP
Sbjct: 400 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKK-GMK-IACTQP 457
Query: 116 RRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLEN 175
RRVAAMSVA RV+ EM +LG EVGYSIRFEDC+S +TVL+YMTDGMLLRE +S+P L +
Sbjct: 458 RRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLAS 517
Query: 176 YQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVP 235
Y V+++DEAHERTL TDIL G++K+V + R +LK+++ SATLD +F +FD+AP+ +P
Sbjct: 518 YSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPIFRIP 577
Query: 236 GRTHPVEIFYTPEP 249
GR PV+IFYT P
Sbjct: 578 GRRFPVDIFYTKAP 591
Score = 75 (31.5 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVY 292
F RP + AD+A++ F GDHL LLNVY
Sbjct: 858 FYRPKDKVVHADNARVNFFLPGGDHLVLLNVY 889
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 591 (213.1 bits), Expect = 2.7e-62, Sum P(2) = 2.7e-62
Identities = 116/194 (59%), Positives = 151/194 (77%)
Query: 58 RITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAKAVACTQP 115
R LP++++R + + + +Q +++VGETGSGKTTQ+PQ+ E Y+K+ G K V CTQP
Sbjct: 478 RKKLPIYQFRDQIIQAVHDHQVLIIVGETGSGKTTQLPQYLHEAGYTKN-GMK-VGCTQP 535
Query: 116 RRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLEN 175
RRVAAMSVA RV+EEM +LG EVGYSIRFED +S KTVLKYMTDGMLLRE +++P L
Sbjct: 536 RRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDNTSDKTVLKYMTDGMLLRELLTEPDLGQ 595
Query: 176 YQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVP 235
Y +++DEAHERT+ TDI G+LK++ K R DLKL+I SAT+DA KFQ YFDNAP+ N+P
Sbjct: 596 YSALMIDEAHERTVPTDIACGLLKDIAKARPDLKLLISSATMDAQKFQSYFDNAPIFNIP 655
Query: 236 GRTHPVEIFYTPEP 249
GR + V+I YT +P
Sbjct: 656 GRMYNVDIHYTQQP 669
Score = 82 (33.9 bits), Expect = 2.7e-62, Sum P(2) = 2.7e-62
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDG-DHLTLLNVYH 293
F RP + K AD A+ RF DG DHLTLLN+++
Sbjct: 936 FFRPKDKKIHADSARNRFTVKDGGDHLTLLNIWN 969
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 582 (209.9 bits), Expect = 3.3e-62, Sum P(2) = 3.3e-62
Identities = 113/192 (58%), Positives = 145/192 (75%)
Query: 58 RITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRR 117
R +LPV+ YR + + + + Q +++VGETGSGKTTQIPQ+ E S K + CTQPRR
Sbjct: 464 RKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGK-IGCTQPRR 522
Query: 118 VAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQ 177
VAAMSVA RV+EE+ C+LG EVGYSIRFEDC+S KTVL+YMTDGML+RE ++ P L +Y
Sbjct: 523 VAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTAPDLASYS 582
Query: 178 VILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGR 237
V+++DEAHERTL TDIL G+LK++ + R DLKL+I SAT+DA +F YFD AP N+PGR
Sbjct: 583 VLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDGAPTFNIPGR 642
Query: 238 THPVEIFYTPEP 249
+ V YT P
Sbjct: 643 KYEVTTHYTQAP 654
Score = 90 (36.7 bits), Expect = 3.3e-62, Sum P(2) = 3.3e-62
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
F RP + AAD A+ F H GDHLTL+NV++ +++
Sbjct: 921 FYRPKDKAFAADAARKLFFHPQGDHLTLMNVFNQWRE 957
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 583 (210.3 bits), Expect = 4.3e-62, Sum P(2) = 4.3e-62
Identities = 111/193 (57%), Positives = 144/193 (74%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPR 116
+R +LP+F + M + NQ +V+VGETGSGKTTQ+ Q+ +E K + CTQPR
Sbjct: 536 QRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGK-IGCTQPR 594
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENY 176
RVAAMSVA+RV+EE C+LG +VGY+IRFEDC+S T++KYMTDGMLLRE + DP L Y
Sbjct: 595 RVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGY 654
Query: 177 QVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
+I+LDEAHERT+ TD+L G+LK ++R +LKL+I SATLD+ KF +YF AP+ +PG
Sbjct: 655 SLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPG 714
Query: 237 RTHPVEIFYTPEP 249
RT PVEI YT EP
Sbjct: 715 RTFPVEILYTREP 727
Score = 90 (36.7 bits), Expect = 4.3e-62, Sum P(2) = 4.3e-62
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
F RP E + AD K +F +GDHLTLL VY+++K
Sbjct: 993 FYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWK 1028
Score = 37 (18.1 bits), Expect = 1.6e-56, Sum P(2) = 1.6e-56
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 255 PWLPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLN 290
PW + F + K+A D K +D L +++
Sbjct: 1035 PWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVS 1070
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 583 (210.3 bits), Expect = 4.3e-62, Sum P(2) = 4.3e-62
Identities = 111/193 (57%), Positives = 144/193 (74%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPR 116
+R +LP+F + M + NQ +V+VGETGSGKTTQ+ Q+ +E K + CTQPR
Sbjct: 536 QRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGK-IGCTQPR 594
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENY 176
RVAAMSVA+RV+EE C+LG +VGY+IRFEDC+S T++KYMTDGMLLRE + DP L Y
Sbjct: 595 RVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGY 654
Query: 177 QVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
+I+LDEAHERT+ TD+L G+LK ++R +LKL+I SATLD+ KF +YF AP+ +PG
Sbjct: 655 SLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPG 714
Query: 237 RTHPVEIFYTPEP 249
RT PVEI YT EP
Sbjct: 715 RTFPVEILYTREP 727
Score = 90 (36.7 bits), Expect = 4.3e-62, Sum P(2) = 4.3e-62
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
F RP E + AD K +F +GDHLTLL VY+++K
Sbjct: 993 FYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWK 1028
Score = 37 (18.1 bits), Expect = 1.6e-56, Sum P(2) = 1.6e-56
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 255 PWLPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLN 290
PW + F + K+A D K +D L +++
Sbjct: 1035 PWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVS 1070
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 592 (213.5 bits), Expect = 6.5e-62, Sum P(2) = 6.5e-62
Identities = 111/192 (57%), Positives = 147/192 (76%)
Query: 58 RITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRR 117
R +LPVF +R E + +A +Q +++ GETGSGKTTQIPQ+ E + +ACTQPRR
Sbjct: 400 RRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRR 459
Query: 118 VAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQ 177
VAAMSVA RV+ EM +LG EVGYSIRFEDC+S +TVL+YMTDGMLLRE +S+P L +Y
Sbjct: 460 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYS 519
Query: 178 VILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGR 237
V+++DEAHERTL TDIL G++K+V + R +LK+++ SATLD +F +FD+AP+ +PGR
Sbjct: 520 VVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGR 579
Query: 238 THPVEIFYTPEP 249
PV+IFYT P
Sbjct: 580 RFPVDIFYTKAP 591
Score = 75 (31.5 bits), Expect = 6.5e-62, Sum P(2) = 6.5e-62
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVY 292
F RP + AD+A++ F GDHL LLNVY
Sbjct: 858 FYRPKDKVVHADNARVNFFLPGGDHLVLLNVY 889
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 592 (213.5 bits), Expect = 6.5e-62, Sum P(2) = 6.5e-62
Identities = 111/192 (57%), Positives = 147/192 (76%)
Query: 58 RITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRR 117
R +LPVF +R E + +A +Q +++ GETGSGKTTQIPQ+ E + +ACTQPRR
Sbjct: 400 RRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRR 459
Query: 118 VAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQ 177
VAAMSVA RV+ EM +LG EVGYSIRFEDC+S +TVL+YMTDGMLLRE +S+P L +Y
Sbjct: 460 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYS 519
Query: 178 VILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGR 237
V+++DEAHERTL TDIL G++K+V + R +LK+++ SATLD +F +FD+AP+ +PGR
Sbjct: 520 VVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGR 579
Query: 238 THPVEIFYTPEP 249
PV+IFYT P
Sbjct: 580 RFPVDIFYTKAP 591
Score = 75 (31.5 bits), Expect = 6.5e-62, Sum P(2) = 6.5e-62
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVY 292
F RP + AD+A++ F GDHL LLNVY
Sbjct: 858 FYRPKDKVVHADNARVNFFLPGGDHLVLLNVY 889
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 590 (212.7 bits), Expect = 1.0e-61, Sum P(2) = 1.0e-61
Identities = 110/192 (57%), Positives = 147/192 (76%)
Query: 58 RITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRR 117
R +LPVF +R E + +A +Q +++ GETGSGKTTQIPQ+ E + +ACTQPRR
Sbjct: 396 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRR 455
Query: 118 VAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQ 177
VAAMSVA RV+ EM +LG EVGYSIRFEDC+S +TVL+YMTDGMLLRE +S+P L +Y
Sbjct: 456 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYS 515
Query: 178 VILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGR 237
V+++DEAHERTL TDIL G++K+V + R +LK+++ SAT+D +F +FD+AP+ +PGR
Sbjct: 516 VVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGR 575
Query: 238 THPVEIFYTPEP 249
PV+IFYT P
Sbjct: 576 RFPVDIFYTKAP 587
Score = 75 (31.5 bits), Expect = 1.0e-61, Sum P(2) = 1.0e-61
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVY 292
F RP + AD+A++ F GDHL LLNVY
Sbjct: 854 FYRPKDKVVHADNARVNFFLPGGDHLVLLNVY 885
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 583 (210.3 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 109/199 (54%), Positives = 152/199 (76%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGA 107
R + +R LPVF R E + ++ +N I++VGETGSGKTTQ+ Q+ E YSK G
Sbjct: 523 RKKTISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKR-GM 581
Query: 108 KAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREG 167
+ CTQPRRVAAMSVA+RVS+EMD QLG++VGY+IRFEDC+S +TV+KYMTDG+LLRE
Sbjct: 582 --IGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRES 639
Query: 168 MSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFD 227
+ DP L++Y I++DEAHER+L+TD+L G+L+E++ +R DLKL++ SAT+D+ KF +F
Sbjct: 640 LRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFFG 699
Query: 228 NAPLMNVPGRTHPVEIFYT 246
N P +PGRT PV++ ++
Sbjct: 700 NVPTFTIPGRTFPVDVMFS 718
Score = 84 (34.6 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
+P F RP + AD + +F + DHLT LNVY ++Q
Sbjct: 982 VPSIFYRPKGREDEADGVREKFQRPESDHLTYLNVYQQWRQ 1022
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 554 (200.1 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 115/221 (52%), Positives = 153/221 (69%)
Query: 40 NPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCV 99
+P P+T E R+R LPVF++R + L+ Q +V+VGETGSGK+TQIPQ+ +
Sbjct: 25 SPIVFNPHTALTIEKQRQR--LPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLL 82
Query: 100 EYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPK-TVLKYM 158
E + K + TQPRRVAA SVA RV+EE LG EVGY+IRF+DCS P T +K++
Sbjct: 83 EAGWAAEGKVIGVTQPRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATRIKFL 142
Query: 159 TDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLD 218
TDGML+RE MSDP+L+ Y V++LDEAHERTL TDI +G+LK+++K+R DL+L++ SATLD
Sbjct: 143 TDGMLVREMMSDPLLKKYSVLILDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASATLD 202
Query: 219 AGKFQQYF----------DNAPLMNVPGRTHPVEIFYTPEP 249
A KFQ +F D ++ V GRT PV+IFYT P
Sbjct: 203 AKKFQDFFNLNESGDASKDTCGILTVEGRTFPVDIFYTVSP 243
Score = 89 (36.4 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAF 295
F P+ +K+A +FA +GDHLT+LNVY AF
Sbjct: 511 FVAPHNQRKSAAREHRKFAVAEGDHLTMLNVYEAF 545
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 569 (205.4 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 108/203 (53%), Positives = 156/203 (76%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSV-- 105
++ ++ ++R +LP F R + +T + NQ +++GETGSGKTTQ+ Q+ E + ++
Sbjct: 347 KHQDIQQQRKSLPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQLTQFLYEDGFGANIDK 406
Query: 106 -GAKAV-ACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFED-CSSPKTVLKYMTDGM 162
G K + ACTQPRRVAAMSVA+RVSEEM+C+LG+EVGYSIRFED + KTV+KYMT+G+
Sbjct: 407 NGEKRIIACTQPRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTDNKKTVIKYMTEGI 466
Query: 163 LLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKF 222
LLRE ++DPML NY I++DEAHER+L TDIL+G+ K ++ +R DLKL++ SAT++A +F
Sbjct: 467 LLREILADPMLANYSCIIMDEAHERSLNTDILLGLFKNLLAKRKDLKLIVTSATMNANRF 526
Query: 223 QQYFDNAPLMNVPGRTHPVEIFY 245
++F AP ++PGRT PVE+F+
Sbjct: 527 TKFFGVAPQFHIPGRTFPVEVFF 549
Score = 88 (36.0 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQRFGLF 302
+P F RP E AD A+ +F + DHLTLLNV++ + F
Sbjct: 825 VPNIFNRPKERANEADMAREKFIISESDHLTLLNVFNQWNINLNKF 870
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 558 (201.5 bits), Expect = 1.8e-60, Sum P(2) = 1.8e-60
Identities = 103/193 (53%), Positives = 146/193 (75%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPR 116
+R LP+F + E +T++ N +++VGETGSGKTTQ+ Q+ E + + CTQPR
Sbjct: 67 QRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMIGCTQPR 125
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENY 176
RVAAMSVA+RVSEEM LG+EVGY+IRFEDC+S T++KYMTDG+LLRE + + L++Y
Sbjct: 126 RVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHY 185
Query: 177 QVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
I++DEAHER+L TD+L G+L+EV+ +R+DLKL++ SAT+DA KF +F N P+ ++PG
Sbjct: 186 SAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPG 245
Query: 237 RTHPVEIFYTPEP 249
RT PV+I ++ P
Sbjct: 246 RTFPVDILFSKTP 258
Score = 79 (32.9 bits), Expect = 1.8e-60, Sum P(2) = 1.8e-60
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
+P F RP ++ +D + +FA + DHLT LNVY +K
Sbjct: 519 VPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWK 558
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 577 (208.2 bits), Expect = 2.2e-60, Sum P(2) = 2.2e-60
Identities = 111/226 (49%), Positives = 156/226 (69%)
Query: 25 VNASVSTSIASNLQVN-PFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLV 83
+N + AS+L N P G + + +R LP+F R + M ++ +N I++V
Sbjct: 622 LNYKAQSQFASHLTPNKPTEGSSEFSKTKTIKEQREFLPIFGCRNDLMKIIRENNVIIIV 681
Query: 84 GETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSI 143
GETGSGKTTQ+ Q+ E S K + CTQPRRVAA+SVA+RVSEEM LG EVGYSI
Sbjct: 682 GETGSGKTTQLVQYLYEDGYSKFGK-IGCTQPRRVAAVSVAKRVSEEMSVTLGNEVGYSI 740
Query: 144 RFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIK 203
RFEDC+S +T +KYMTDG+LLRE +DP L+ Y I++DEAHER+L TD+L G+LK+V+
Sbjct: 741 RFEDCTSNETAIKYMTDGILLRESFNDPNLDKYSAIIMDEAHERSLNTDVLFGILKKVMS 800
Query: 204 QRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEP 249
+R D+KL++ SAT+D+ KF +F + P+ +PGRT PV++ ++ P
Sbjct: 801 RRYDMKLIVTSATMDSKKFSMFFGDVPVFTIPGRTFPVDVLWSKTP 846
Score = 83 (34.3 bits), Expect = 2.2e-60, Sum P(2) = 2.2e-60
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
+P F RP A++ +D ++ +F + DHLTLL+VY +K
Sbjct: 1108 MPSVFYRPKGAEEESDASREKFFVPESDHLTLLHVYQQWK 1147
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 578 (208.5 bits), Expect = 3.2e-60, Sum P(2) = 3.2e-60
Identities = 111/203 (54%), Positives = 156/203 (76%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
+Y E+ RK +LPV+ YR EF+ ++ +NQ +++VGETGSGKTTQ+PQ+ E S +
Sbjct: 221 KYDEV-RK--SLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLHEAGYSRNNQV 277
Query: 110 VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFED-CSSPKTVLKYMTDGMLLREGM 168
+ACTQPRRVAA SVA RV+ EM +LG++VGY+IRF+D C TV+KY+TDGMLLRE +
Sbjct: 278 IACTQPRRVAATSVANRVANEMQVKLGEQVGYNIRFDDNCKDGVTVIKYVTDGMLLREFL 337
Query: 169 SDPMLENYQVILLDEAHERTLATDILMGVLKEVIK--QRADLKLVIMSATLDAGKFQQYF 226
DP L Y I++DEAHERTL+T+IL+ +LK+V+ ++ DLK++I SAT++A KF Q+F
Sbjct: 338 QDPTLGKYSAIMIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIASATINAEKFSQFF 397
Query: 227 DNAPLMNVPGRTHPVEIFYTPEP 249
+NAP++N+PGR PV+I YT +P
Sbjct: 398 NNAPILNIPGRRFPVKIHYTKQP 420
Score = 64 (27.6 bits), Expect = 3.2e-60, Sum P(2) = 3.2e-60
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVY 292
F RP + K+ AD K F + GD LL ++
Sbjct: 688 FYRPKDKKELADKRKQEFNDLQGDQFMLLKIW 719
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 530 (191.6 bits), Expect = 3.6e-60, Sum P(3) = 3.6e-60
Identities = 104/206 (50%), Positives = 147/206 (71%)
Query: 47 YTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKS 104
+TP ++ + LPVF R++ ++L+ +NQ +V++GETGSGKTTQ+ Q+ E Y+
Sbjct: 336 FTPSKDDIKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYAND 395
Query: 105 VGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPK-TVLKYMTDGML 163
G K++ TQPRRVAA+SVA+RV+ EM LG+EVGYSIRFED + + T LK++TDG+L
Sbjct: 396 RG-KSIVVTQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGIL 454
Query: 164 LREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQ 223
LRE + D L+ Y +++DEAHER+L TDIL+G K ++ +R DLKL+I SAT++A KF
Sbjct: 455 LRETLLDDTLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFS 514
Query: 224 QYFDNAPLMNVPGRTHPVEIFYTPEP 249
+F NAP +PGRT PV+ YT P
Sbjct: 515 AFFGNAPQFTIPGRTFPVQTIYTSNP 540
Score = 95 (38.5 bits), Expect = 3.6e-60, Sum P(3) = 3.6e-60
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
+PQ F RP E +K AD A+ +F DHLTLLNV+ ++
Sbjct: 814 VPQVFYRPKERQKEADIARNKFFIAKSDHLTLLNVFEQWR 853
Score = 50 (22.7 bits), Expect = 3.6e-60, Sum P(3) = 3.6e-60
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 3 KRRLDVIDPYITKKNREERLAT--VNASVS-TS--IASNLQVNPF 42
K+R++ I P+++K E ++ T + S+S TS +++ VNPF
Sbjct: 223 KQRMEWIPPFLSKFALENKVPTSIIIGSISETSSQVSALSMVNPF 267
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 560 (202.2 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
Identities = 115/243 (47%), Positives = 161/243 (66%)
Query: 10 DPYITKKN-REERLATVNASVSTSIASNLQVNPFTGYPYTPRYHELHRKRITLPVFEYRT 68
DP KK+ R E N + T N ++N Y + +R TLPV+ R+
Sbjct: 433 DPTKNKKDSRNEIQMLKNQLIVTEWEKN-RMNESISYGKRTSL-PISAQRQTLPVYAMRS 490
Query: 69 EFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVS 128
E + + NQ +V+VGETGSGKTTQI Q+ E S + CTQPRRVAA+SVA+RV+
Sbjct: 491 ELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFS-NYGMIGCTQPRRVAAVSVAKRVA 549
Query: 129 EEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERT 188
EE+ C++G +VGY+IRFED + P T +KYMTDGML RE + DP + Y VI+LDEAHERT
Sbjct: 550 EEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIMLDEAHERT 609
Query: 189 LATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPE 248
+ATD+L +LK+ +R +LK+++ SATL++ KF +YF N P++N+PG+T PVE+ Y+
Sbjct: 610 VATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTFPVEVLYSQT 669
Query: 249 PPL 251
P +
Sbjct: 670 PQM 672
Score = 94 (38.1 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
F RP + + AD K +F H GDHLTLLNVY ++Q
Sbjct: 936 FYRPKDRQLEADSKKAKFHHPYGDHLTLLNVYTRWQQ 972
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 585 (211.0 bits), Expect = 1.0e-59, Sum P(2) = 1.0e-59
Identities = 108/196 (55%), Positives = 149/196 (76%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACT 113
++ +R LP++ + + M + +N ++++GETGSGKTTQIPQ+ E + + V CT
Sbjct: 624 INEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKG-IVGCT 682
Query: 114 QPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPML 173
QPRRVAAMS+A+RVSEE C LGQEVGYSIRF+DC+S T++KY+TDGMLLRE +SD +L
Sbjct: 683 QPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLL 742
Query: 174 ENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMN 233
Y I+LDEAHERT++TDIL +LK+V+++RAD KL++ SATLDA KF YF N+P+
Sbjct: 743 TKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFT 802
Query: 234 VPGRTHPVEIFYTPEP 249
+PG+ PVEI ++ EP
Sbjct: 803 IPGKIFPVEILHSKEP 818
Score = 67 (28.6 bits), Expect = 1.0e-59, Sum P(2) = 1.0e-59
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
F RP AD K +F GD +T LN+Y+ +K+
Sbjct: 1085 FYRPQNKALLADKKKNKFIMPQGDLITYLNIYNKWKE 1121
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 585 (211.0 bits), Expect = 1.0e-59, Sum P(2) = 1.0e-59
Identities = 108/196 (55%), Positives = 149/196 (76%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACT 113
++ +R LP++ + + M + +N ++++GETGSGKTTQIPQ+ E + + V CT
Sbjct: 624 INEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKG-IVGCT 682
Query: 114 QPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPML 173
QPRRVAAMS+A+RVSEE C LGQEVGYSIRF+DC+S T++KY+TDGMLLRE +SD +L
Sbjct: 683 QPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLL 742
Query: 174 ENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMN 233
Y I+LDEAHERT++TDIL +LK+V+++RAD KL++ SATLDA KF YF N+P+
Sbjct: 743 TKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFT 802
Query: 234 VPGRTHPVEIFYTPEP 249
+PG+ PVEI ++ EP
Sbjct: 803 IPGKIFPVEILHSKEP 818
Score = 67 (28.6 bits), Expect = 1.0e-59, Sum P(2) = 1.0e-59
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
F RP AD K +F GD +T LN+Y+ +K+
Sbjct: 1085 FYRPQNKALLADKKKNKFIMPQGDLITYLNIYNKWKE 1121
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 568 (205.0 bits), Expect = 1.7e-59, Sum P(2) = 1.7e-59
Identities = 105/193 (54%), Positives = 147/193 (76%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPR 116
+R LP+F + E +++L N +++VGETGSGKTTQ+ Q+ E + + CTQPR
Sbjct: 531 QRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMIGCTQPR 589
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENY 176
RVAAMSVA+RVSEEM +LG+EVGY+IRFEDC+S T++KYMTDG+LLRE + + L+NY
Sbjct: 590 RVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREADLDNY 649
Query: 177 QVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
I++DEAHER+L TD+L G+L+EV+ +R+DLKLV+ SAT+DA KF +F N P+ ++PG
Sbjct: 650 SAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPG 709
Query: 237 RTHPVEIFYTPEP 249
RT PV+I ++ P
Sbjct: 710 RTFPVDILFSKTP 722
Score = 80 (33.2 bits), Expect = 1.7e-59, Sum P(2) = 1.7e-59
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
+P F RP ++ +D + +FA + DHLT LNVY +K
Sbjct: 917 VPAIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWK 956
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 568 (205.0 bits), Expect = 1.8e-59, Sum P(2) = 1.8e-59
Identities = 105/193 (54%), Positives = 147/193 (76%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPR 116
+R LP+F + E +++L N +++VGETGSGKTTQ+ Q+ E + + CTQPR
Sbjct: 534 QRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMIGCTQPR 592
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENY 176
RVAAMSVA+RVSEEM +LG+EVGY+IRFEDC+S T++KYMTDG+LLRE + + L+NY
Sbjct: 593 RVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREADLDNY 652
Query: 177 QVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
I++DEAHER+L TD+L G+L+EV+ +R+DLKLV+ SAT+DA KF +F N P+ ++PG
Sbjct: 653 SAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPG 712
Query: 237 RTHPVEIFYTPEP 249
RT PV+I ++ P
Sbjct: 713 RTFPVDILFSKTP 725
Score = 80 (33.2 bits), Expect = 1.8e-59, Sum P(2) = 1.8e-59
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
+P F RP ++ +D + +FA + DHLT LNVY +K
Sbjct: 923 VPAIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWK 962
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 566 (204.3 bits), Expect = 4.9e-59, Sum P(2) = 4.9e-59
Identities = 107/197 (54%), Positives = 147/197 (74%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACT 113
+ ++R LPVF R + M ++ +N +++VGETGSGKTTQ+ Q+ +E + + CT
Sbjct: 434 IKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFG-DSGLIGCT 492
Query: 114 QPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPML 173
QPRRVAAMSVA+RV++EM LGQ+VGY+IRFEDC+S KT++KYMTDG+LLRE + D L
Sbjct: 493 QPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSL 552
Query: 174 ENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFD-NAPLM 232
+ Y I++DEAHER+L TD+L G+L+EVI +RADLKL++ SAT+DA KF +F N P
Sbjct: 553 DQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTF 612
Query: 233 NVPGRTHPVEIFYTPEP 249
+PGRT PVE+F+ P
Sbjct: 613 TIPGRTFPVELFHARTP 629
Score = 77 (32.2 bits), Expect = 4.9e-59, Sum P(2) = 4.9e-59
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVY 292
+P F RP ++ AD K +F + DHLT LNVY
Sbjct: 890 VPAIFFRPKGREEEADAKKEKFQVPESDHLTFLNVY 925
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 566 (204.3 bits), Expect = 4.9e-59, Sum P(2) = 4.9e-59
Identities = 107/197 (54%), Positives = 147/197 (74%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACT 113
+ ++R LPVF R + M ++ +N +++VGETGSGKTTQ+ Q+ +E + + CT
Sbjct: 434 IKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFG-DSGLIGCT 492
Query: 114 QPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPML 173
QPRRVAAMSVA+RV++EM LGQ+VGY+IRFEDC+S KT++KYMTDG+LLRE + D L
Sbjct: 493 QPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSL 552
Query: 174 ENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFD-NAPLM 232
+ Y I++DEAHER+L TD+L G+L+EVI +RADLKL++ SAT+DA KF +F N P
Sbjct: 553 DQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTF 612
Query: 233 NVPGRTHPVEIFYTPEP 249
+PGRT PVE+F+ P
Sbjct: 613 TIPGRTFPVELFHARTP 629
Score = 77 (32.2 bits), Expect = 4.9e-59, Sum P(2) = 4.9e-59
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVY 292
+P F RP ++ AD K +F + DHLT LNVY
Sbjct: 890 VPAIFFRPKGREEEADAKKEKFQVPESDHLTFLNVY 925
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 567 (204.7 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
Identities = 106/198 (53%), Positives = 151/198 (76%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAKAVA 111
L +R LP+F R + + ++ N +++VGETGSGKTTQ+ Q+ E Y+ S G V
Sbjct: 556 LLEQRQYLPIFAVRQQLLNIIRDNNIVIVVGETGSGKTTQLTQYLHEDGYT-SYGM--VG 612
Query: 112 CTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDP 171
CTQPRRVAAMSVA+RVSEEM+ LG+EVGY+IRFEDC+S KT++KYMTDG+LLRE + +
Sbjct: 613 CTQPRRVAAMSVAKRVSEEMNSNLGEEVGYAIRFEDCTSEKTMIKYMTDGILLRESLRES 672
Query: 172 MLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPL 231
L++Y +++DEAHER+L TD+L G+L+EV+ +R+DLKL++ SAT+D+ KF +F N P+
Sbjct: 673 DLDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRSDLKLIVTSATMDSDKFASFFGNVPI 732
Query: 232 MNVPGRTHPVEIFYTPEP 249
++PGRT PV+I ++ P
Sbjct: 733 FHIPGRTFPVDILFSKTP 750
Score = 78 (32.5 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
+P F RP ++ +D + +F+ + DHLT LNVY +K
Sbjct: 1011 VPSIFYRPKGREEESDQVREKFSVPESDHLTYLNVYLQWK 1050
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 550 (198.7 bits), Expect = 3.4e-58, Sum P(2) = 3.4e-58
Identities = 103/197 (52%), Positives = 144/197 (73%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA-VAC 112
+ +R LP F R + M ++ NQ I++VGETGSGKTTQ+ Q+ Y G + C
Sbjct: 296 IREQREFLPAFAVREDLMRVIRDNQVIIVVGETGSGKTTQLTQFL--YEDGYGQLGMIGC 353
Query: 113 TQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPM 172
TQPRRVAAMSVA+RVSEEM+ +LG VGY+IRFEDC+S TV+KYMTDG+LLRE +++P
Sbjct: 354 TQPRRVAAMSVAKRVSEEMEVKLGGTVGYAIRFEDCTSKDTVIKYMTDGVLLRESLNEPD 413
Query: 173 LENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLM 232
L+ Y I++DEAHER L TD+LMG+ K+++++R DLKL++ SAT++A +F +F AP
Sbjct: 414 LDRYSCIIMDEAHERALNTDVLMGLFKKILQRRRDLKLIVTSATMNAKRFSDFFGGAPDF 473
Query: 233 NVPGRTHPVEIFYTPEP 249
+PGRT PV++ ++ P
Sbjct: 474 TIPGRTFPVDVMFSRSP 490
Score = 82 (33.9 bits), Expect = 3.4e-58, Sum P(2) = 3.4e-58
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
+P F RP E ++ +D A+ +F + DHLT L+VY +K
Sbjct: 751 VPNVFYRPKERQEESDAAREKFFVPESDHLTFLHVYSQWK 790
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 557 (201.1 bits), Expect = 4.5e-58, Sum P(2) = 4.5e-58
Identities = 103/193 (53%), Positives = 146/193 (75%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPR 116
+R LP+F + E +T++ N +++VGETGSGKTTQ+ Q+ E + + CTQPR
Sbjct: 528 QRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMIGCTQPR 586
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENY 176
RVAAMSVA+RVSEEM LG+EVGY+IRFEDC+S T++KYMTDG+LLRE + + L++Y
Sbjct: 587 RVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHY 646
Query: 177 QVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
I++DEAHER+L TD+L G+L+EV+ +R+DLKL++ SAT+DA KF +F N P+ ++PG
Sbjct: 647 SAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPG 706
Query: 237 RTHPVEIFYTPEP 249
RT PV+I ++ P
Sbjct: 707 RTFPVDILFSKTP 719
Score = 79 (32.9 bits), Expect = 4.5e-58, Sum P(2) = 4.5e-58
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
+P F RP ++ +D + +FA + DHLT LNVY +K
Sbjct: 980 VPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWK 1019
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 557 (201.1 bits), Expect = 4.5e-58, Sum P(2) = 4.5e-58
Identities = 102/193 (52%), Positives = 145/193 (75%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPR 116
+R LP+F + E +T++ N +++VGETGSGKTTQ+ Q+ + + CTQPR
Sbjct: 529 QRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQY-LHQDGYTDYGMIGCTQPR 587
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENY 176
RVAAMSVA+RVSEEM LG+EVGY+IRFEDC+S T++KYMTDG+LLRE + + L++Y
Sbjct: 588 RVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHY 647
Query: 177 QVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
I++DEAHER+L TD+L G+L+EV+ +R+DLKL++ SAT+DA KF +F N P+ ++PG
Sbjct: 648 SAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDADKFAAFFGNVPIFHIPG 707
Query: 237 RTHPVEIFYTPEP 249
RT PV+I ++ P
Sbjct: 708 RTFPVDILFSKTP 720
Score = 79 (32.9 bits), Expect = 4.5e-58, Sum P(2) = 4.5e-58
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
+P F RP ++ +D + +FA + DHLT LNVY +K
Sbjct: 981 VPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWK 1020
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 556 (200.8 bits), Expect = 5.7e-58, Sum P(2) = 5.7e-58
Identities = 102/193 (52%), Positives = 146/193 (75%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPR 116
+R LP+F + E +T++ N +++VGETGSGKTTQ+ Q+ E + + CTQPR
Sbjct: 527 QRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMIGCTQPR 585
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENY 176
RVAAMSVA+RVSEEM LG+EVGY+IRFEDC+S T++KYMTDG+LLRE + + L++Y
Sbjct: 586 RVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHY 645
Query: 177 QVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
+++DEAHER+L TD+L G+L+EV+ +R+DLKL++ SAT+DA KF +F N P+ ++PG
Sbjct: 646 SAVIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPG 705
Query: 237 RTHPVEIFYTPEP 249
RT PV+I ++ P
Sbjct: 706 RTFPVDILFSKTP 718
Score = 79 (32.9 bits), Expect = 5.7e-58, Sum P(2) = 5.7e-58
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
+P F RP ++ +D + +FA + DHLT LNVY +K
Sbjct: 979 VPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWK 1018
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 558 (201.5 bits), Expect = 9.1e-58, Sum P(2) = 9.1e-58
Identities = 103/193 (53%), Positives = 146/193 (75%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPR 116
+R LP+F + E +T++ N +++VGETGSGKTTQ+ Q+ E + + CTQPR
Sbjct: 528 QRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMIGCTQPR 586
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENY 176
RVAAMSVA+RVSEEM LG+EVGY+IRFEDC+S T++KYMTDG+LLRE + + L++Y
Sbjct: 587 RVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHY 646
Query: 177 QVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
I++DEAHER+L TD+L G+L+EV+ +R+DLKL++ SAT+DA KF +F N P+ ++PG
Sbjct: 647 SAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPG 706
Query: 237 RTHPVEIFYTPEP 249
RT PV+I ++ P
Sbjct: 707 RTFPVDILFSKTP 719
Score = 75 (31.5 bits), Expect = 9.1e-58, Sum P(2) = 9.1e-58
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
+P F RP ++ +D + +FA + DHL+ LNVY +K
Sbjct: 979 VPAIFYRPKGREEESDQIREKFAVPESDHLSYLNVYLQWK 1018
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 558 (201.5 bits), Expect = 9.2e-58, Sum P(2) = 9.2e-58
Identities = 103/193 (53%), Positives = 146/193 (75%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPR 116
+R LP+F + E +T++ N +++VGETGSGKTTQ+ Q+ E + + CTQPR
Sbjct: 528 QRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMIGCTQPR 586
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENY 176
RVAAMSVA+RVSEEM LG+EVGY+IRFEDC+S T++KYMTDG+LLRE + + L++Y
Sbjct: 587 RVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHY 646
Query: 177 QVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPG 236
I++DEAHER+L TD+L G+L+EV+ +R+DLKL++ SAT+DA KF +F N P+ ++PG
Sbjct: 647 SAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPG 706
Query: 237 RTHPVEIFYTPEP 249
RT PV+I ++ P
Sbjct: 707 RTFPVDILFSKTP 719
Score = 75 (31.5 bits), Expect = 9.2e-58, Sum P(2) = 9.2e-58
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
+P F RP ++ +D + +FA + DHL+ LNVY +K
Sbjct: 980 VPAIFYRPKGREEESDQIREKFAVPESDHLSYLNVYLQWK 1019
>UNIPROTKB|F1PER1 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 GO:GO:0005524 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
EMBL:AAEX03015636 RefSeq:XP_003433686.1 Ensembl:ENSCAFT00000020520
GeneID:100685023 KEGG:cfa:100685023 Uniprot:F1PER1
Length = 745
Score = 521 (188.5 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 104/248 (41%), Positives = 158/248 (63%)
Query: 1 MSKRRLDVIDPYITKKNREERLATVNASVSTSIA-SNLQVNPFTGYPYTPRYHELHRKRI 59
M + L+ + K+ E L + + +A +L++NPF G PY+ RY++L ++R
Sbjct: 1 MEEEELECPNSASEKRYFPESLDSSDGDEEGILACEDLELNPFDGLPYSSRYYKLLKERE 60
Query: 60 TLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAK--AVACTQPRR 117
LP+++ + FM L QNQ +++ G+ GK++Q+PQWC EY S+ + V CTQ +
Sbjct: 61 DLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSSQVPQWCAEYCLSIHYQHGGVVCTQVHK 120
Query: 118 VAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQ 177
A+ +A RV++EMD +G EVGY I FE+C S +T+L+Y TD ML RE MS P L NY
Sbjct: 121 PTAVQLALRVADEMDVNIGHEVGYMIPFENCCSSETILRYCTDDMLQREMMSSPFLGNYG 180
Query: 178 VILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGR 237
VI+LD+ HER++ATD+L+G+LK+V+ R +LKL+I S+ K Y+ N PL+ V +
Sbjct: 181 VIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLSSYYGNVPLIEVK-K 239
Query: 238 THPVEIFY 245
HPVE+ Y
Sbjct: 240 QHPVEVVY 247
Score = 90 (36.7 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 258 PQCFTR-PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
P CF+ P+ A++AA F H +GDH TL+N+Y A++
Sbjct: 517 PNCFSNLPHGAEEAALTCWKTFLHPEGDHFTLINIYKAYQ 556
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 548 (198.0 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
Identities = 110/209 (52%), Positives = 149/209 (71%)
Query: 43 TGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-- 100
T + T Y E +R LP F R + ++++ NQ +++VGETGSGKTTQ+ Q+ E
Sbjct: 477 TEFARTKSYRE---QREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDG 533
Query: 101 YSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTD 160
Y ++ G + CTQPRRVAAMSVA+RVSEEM +LG VGYSIRFED + P TV+KYMTD
Sbjct: 534 YHRN-GM--IGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTD 590
Query: 161 GMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAG 220
G+LLRE + LE Y VI++DEAHER+L TDILMG+LK+V+ +R D+KL++ SAT+++
Sbjct: 591 GVLLRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQ 650
Query: 221 KFQQYFDNAPLMNVPGRTHPVEIFYTPEP 249
KF +F AP +PGRT+PV+I + P
Sbjct: 651 KFSDFFGGAPQFTIPGRTYPVDIMFAKAP 679
Score = 81 (33.6 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQRFG 300
+P F RP E + +D A+ +F + DHL LLN+Y + QR G
Sbjct: 940 VPSVFYRPKERAEESDAAREKFNVPESDHLMLLNIYQHW-QRNG 982
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 110/192 (57%), Positives = 147/192 (76%)
Query: 58 RITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRR 117
R +LPVF +R E + +A +Q +++ GETGSGKTTQIPQ+ E + +ACTQPRR
Sbjct: 396 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRR 455
Query: 118 VAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQ 177
VAAMSVA RV+ EM +LG EVGYSIRFEDC+S +TVL+YMTDGMLLRE +S+P L +Y
Sbjct: 456 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYS 515
Query: 178 VILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGR 237
V+++DEAHERTL TDIL G++K+V + R +LK+++ SAT+D +F +FD+AP+ +PGR
Sbjct: 516 VVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGR 575
Query: 238 THPVEIFYTPEP 249
PV+IFYT P
Sbjct: 576 RFPVDIFYTKAP 587
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 537 (194.1 bits), Expect = 2.3e-57, Sum P(2) = 2.3e-57
Identities = 104/198 (52%), Positives = 143/198 (72%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAKAVA 111
L +R LP F R + + ++ NQ +V+VGETGSGKTTQ+ Q+ E Y+K G +
Sbjct: 181 LREQREFLPAFAVREDLLRVIRDNQVVVVVGETGSGKTTQLTQFLYEDGYAK-FGM--IG 237
Query: 112 CTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDP 171
CTQPRRVAAMSVA+RVSEEM+ LG VGY+IRFEDC+ P T +KYMTDG+LLRE +
Sbjct: 238 CTQPRRVAAMSVAKRVSEEMEVDLGDLVGYAIRFEDCTGPNTAIKYMTDGVLLRESLVQT 297
Query: 172 MLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPL 231
L+ Y I++DEAHER L TD+LMG+LK+++ +R DLKL++ SAT++A +F ++F AP
Sbjct: 298 DLDKYSCIIMDEAHERALNTDVLMGLLKKILARRRDLKLIVTSATMNAERFSRFFGGAPE 357
Query: 232 MNVPGRTHPVEIFYTPEP 249
+PGRT PV++ ++ P
Sbjct: 358 FIIPGRTFPVDVHFSRTP 375
Score = 85 (35.0 bits), Expect = 2.3e-57, Sum P(2) = 2.3e-57
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
+P F RP E ++ +D A+ +F + DHLTLL+VY +K
Sbjct: 637 VPNVFYRPKERQEESDAAREKFFVPESDHLTLLHVYTQWK 676
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 526 (190.2 bits), Expect = 3.3e-57, Sum P(2) = 3.3e-57
Identities = 100/199 (50%), Positives = 146/199 (73%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAV-ACTQP 115
+R LP+F+ R ++ L +C VL+GETGSGKTTQIPQ+ Y +G + + A TQP
Sbjct: 20 QRRELPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYL--YEAGIGRQGIIAVTQP 77
Query: 116 RRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLEN 175
RRVAA+S+A RVS+E +LG+ VGY++RF+D +S +T +K++TDGMLLRE + DP+L
Sbjct: 78 RRVAAISLATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFLTDGMLLREAIGDPILRK 137
Query: 176 YQVILLDEAHERTLATDILMGVLKEVIKQRADL-----KLVIMSATLDAGKFQQYFDNAP 230
Y V++LDEAHERT+ TD+L GV+K K+R +L K+++MSAT+D +F QYF+ AP
Sbjct: 138 YSVVILDEAHERTIHTDVLFGVVKAAQKKRKELGKLPLKVIVMSATMDVDQFSQYFNGAP 197
Query: 231 LMNVPGRTHPVEIFYTPEP 249
++ + GR HP+++FYT +P
Sbjct: 198 VLYLEGRQHPIQVFYTKQP 216
Score = 80 (33.2 bits), Expect = 3.3e-57, Sum P(2) = 3.3e-57
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 264 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQRFG 300
P + + +F +GDHLTLLNVY AFK G
Sbjct: 491 PPARRDEVQSVRKKFISSEGDHLTLLNVYRAFKNVSG 527
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 514 (186.0 bits), Expect = 6.6e-57, Sum P(2) = 6.6e-57
Identities = 102/248 (41%), Positives = 160/248 (64%)
Query: 1 MSKRRLDVIDPYITKKNREERLATVNASVSTSIA-SNLQVNPFTGYPYTPRYHELHRKRI 59
M + LD + K+ E L + + +A +L++NPF G PY+ RY++L ++R
Sbjct: 1 MDEEELDHPNASPEKRYFPESLDSSDGDEEGVLACEDLELNPFDGLPYSSRYYKLLKERE 60
Query: 60 TLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAK--AVACTQPRR 117
LP+++ + FM L QNQ +V+ G++ GK++Q+PQWC EY S+ + V CTQ +
Sbjct: 61 ELPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVICTQAHK 120
Query: 118 VAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQ 177
A+ +A RV++EMD +G EVGY I FE+C + +T+L+Y TD ML RE MS+P L +Y
Sbjct: 121 QTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSNPFLGSYG 180
Query: 178 VILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGR 237
VI+LD+ HER+LATD+L+G+LK+V+ R +LKL++ + L K Y+ + P++ V +
Sbjct: 181 VIILDDVHERSLATDVLLGLLKDVLLARPELKLIVNCSPLLTSKLSSYYGDVPVIEVRNK 240
Query: 238 THPVEIFY 245
HPVE+ Y
Sbjct: 241 -HPVEVVY 247
Score = 92 (37.4 bits), Expect = 6.6e-57, Sum P(2) = 6.6e-57
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 258 PQCFTR-PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
P CF P+ A++AA F H +GDH TL+NVY+A++
Sbjct: 517 PSCFLHVPHGAEEAAVTCWKTFLHPEGDHFTLINVYNAYQ 556
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 514 (186.0 bits), Expect = 6.9e-57, Sum P(2) = 6.9e-57
Identities = 103/200 (51%), Positives = 143/200 (71%)
Query: 53 ELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYS-KSVGAKAVA 111
E+ ++ +LPVF + + ++ ++++ ETG+GKTTQIPQ+ E K G +A
Sbjct: 65 EIKLQKESLPVFTAKDALLKNFKEHSTVIIISETGTGKTTQIPQYLYENGYKDNGI--IA 122
Query: 112 CTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDP 171
TQPRRVAA+S+++RVS+EM +LG +VGY +RF+D ++ KT LKYMTDGML+RE M D
Sbjct: 123 ITQPRRVAAVSISKRVSQEMGVELGDQVGYCVRFDDKTNEKTKLKYMTDGMLVREAMLDS 182
Query: 172 MLENYQVILLDEAHERTLATDILMGVLKEVIKQRAD---LKLVIMSATLDAGKFQQYFDN 228
L Y VI+LDEAHERTL TD+L G+LK + K+R LK++IMSATLDA F QYF+N
Sbjct: 183 SLSKYSVIILDEAHERTLNTDVLFGLLKSIQKRREKKNPLKIIIMSATLDAELFSQYFNN 242
Query: 229 APLMNVPGRTHPVEIFYTPE 248
AP++ + GR PV+I+YT E
Sbjct: 243 APVLYIEGRQFPVQIYYTEE 262
Score = 89 (36.4 bits), Expect = 6.9e-57, Sum P(2) = 6.9e-57
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
F P E KK +D K F DGDH+T LNV+ F++
Sbjct: 540 FFTPKEKKKEVEDVKKIFFSPDGDHITFLNVFREFQK 576
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 516 (186.7 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 115/243 (47%), Positives = 153/243 (62%)
Query: 21 RLATVNASVSTSIA-SNLQVNPFTGYPYTPRYHEL--HRKRITLPVFEYRTEFMTLLAQN 77
R T VS S +L N T Y P Y L ++R LPVF+ R + L+
Sbjct: 12 RPGTEGPGVSISEERQSLAENSATTVVYNP-YAALSIEQQRQKLPVFKLRNHILYLIENY 70
Query: 78 QCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQ 137
Q +V++GETG GK+TQIPQ+ E + + V TQPRRVAA++VA RV+EE LG
Sbjct: 71 QTVVIIGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGH 130
Query: 138 EVGYSIRFEDCSSP-KTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMG 196
EVGY IRF+DC++P T +K++TDGML+RE M DP+L Y I+LDEAHERTL TDI +G
Sbjct: 131 EVGYCIRFDDCTNPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIG 190
Query: 197 VLKEVIKQRADLKLVIMSATLDAGKFQQYF----------DNAPLMNVPGRTHPVEIFYT 246
+LK++ K+R DL+L++ SATLDA KF+ +F D ++ V GRT PV+IFY
Sbjct: 191 LLKKIQKKRGDLRLIVASATLDAEKFRDFFNHNDTSDPTRDTCVILTVEGRTFPVDIFYL 250
Query: 247 PEP 249
P
Sbjct: 251 QSP 253
Score = 85 (35.0 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAF 295
F P+ K A A +FA +GDHLT+LNVY AF
Sbjct: 521 FVVPSNQKSQAIRAHRKFAVEEGDHLTMLNVYEAF 555
Score = 39 (18.8 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 5/12 (41%), Positives = 7/12 (58%)
Query: 239 HPVEIFYTPEPP 250
HP + Y +PP
Sbjct: 639 HPASVLYAEKPP 650
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 516 (186.7 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 108/216 (50%), Positives = 147/216 (68%)
Query: 47 YTPRYHEL--HRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKS 104
Y P Y L ++R LPVF+ R + L+ Q +V+VGETG GK+TQIPQ+ E +
Sbjct: 39 YNP-YASLSIEQQRQKLPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWT 97
Query: 105 VGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPK-TVLKYMTDGML 163
+ V TQPRRVAA+SVA RV++E LG EVGY IRF+DC+ P+ T +K++TDGML
Sbjct: 98 AEGRVVGVTQPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGML 157
Query: 164 LREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQ 223
+RE M+DP+L Y V++LDEAHERTL TDI +G+LK++ K+R DL+L++ SATLDA KF+
Sbjct: 158 VREMMADPLLTRYSVLMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFR 217
Query: 224 QYF----------DNAPLMNVPGRTHPVEIFYTPEP 249
+F D + ++ V GRT PV+IFY P
Sbjct: 218 DFFNQNDTGDPSKDTSVILTVEGRTFPVDIFYIQSP 253
Score = 82 (33.9 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 264 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAF 295
PN+ +AA + +FA +GDHLT+LNVY AF
Sbjct: 527 PNQKSQAARQHR-KFAVEEGDHLTMLNVYEAF 557
Score = 39 (18.8 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 5/12 (41%), Positives = 7/12 (58%)
Query: 239 HPVEIFYTPEPP 250
HP + Y +PP
Sbjct: 641 HPTSVLYAEKPP 652
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 516 (186.7 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 116/243 (47%), Positives = 152/243 (62%)
Query: 21 RLATVNASVSTSIA-SNLQVNPFTGYPYTPRYHEL--HRKRITLPVFEYRTEFMTLLAQN 77
R T VS S +L N T Y P Y L ++R LPVF+ R + L+
Sbjct: 12 RPGTEGPGVSISEERQSLAENSATTVVYNP-YAALSIEQQRQKLPVFKLRNHILYLIENY 70
Query: 78 QCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQ 137
Q +V+VGETG GK+TQIPQ+ E + + V TQPRRVAA++VA RV+EE LG
Sbjct: 71 QTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGH 130
Query: 138 EVGYSIRFEDCSSP-KTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMG 196
EVGY IRF+DC+ P T +K++TDGML+RE M DP+L Y I+LDEAHERTL TDI +G
Sbjct: 131 EVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIG 190
Query: 197 VLKEVIKQRADLKLVIMSATLDAGKFQQYF----------DNAPLMNVPGRTHPVEIFYT 246
+LK++ K+R DL+L++ SATLDA KF+ +F D ++ V GRT PV+IFY
Sbjct: 191 LLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDTSDPPRDTCVILTVEGRTFPVDIFYL 250
Query: 247 PEP 249
P
Sbjct: 251 QSP 253
Score = 81 (33.6 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAF 295
F P+ K A +FA +GDHLT+LNVY AF
Sbjct: 521 FVVPSNQKSQAIRVHRKFAVEEGDHLTMLNVYEAF 555
Score = 39 (18.8 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 5/12 (41%), Positives = 7/12 (58%)
Query: 239 HPVEIFYTPEPP 250
HP + Y +PP
Sbjct: 639 HPASVLYAEKPP 650
>UNIPROTKB|A7MBI4 [details] [associations]
symbol:DHX32 "DHX32 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
EMBL:DAAA02059534 EMBL:DAAA02059535 EMBL:DAAA02059536 EMBL:BC151578
IPI:IPI00715161 RefSeq:NP_001094614.1 UniGene:Bt.44006
Ensembl:ENSBTAT00000007619 GeneID:532978 KEGG:bta:532978
InParanoid:A7MBI4 NextBio:20875863 Uniprot:A7MBI4
Length = 744
Score = 507 (183.5 bits), Expect = 3.1e-56, Sum P(2) = 3.1e-56
Identities = 95/212 (44%), Positives = 145/212 (68%)
Query: 36 NLQVNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIP 95
+L++NPF G PY+ RY++L ++R LP+++ + FM L Q+Q +++ G+ GK++Q+P
Sbjct: 37 DLELNPFDGLPYSSRYYKLLKEREDLPIWKEKYSFMEKLLQSQIVIVSGDAKCGKSSQVP 96
Query: 96 QWCVEYSKSVGAK--AVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKT 153
QWC EY S+ + V CTQ + A+ +A RV++EMD +G EVGY I FE+C + +T
Sbjct: 97 QWCAEYCLSIDYRHGGVVCTQVHKPTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSET 156
Query: 154 VLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIM 213
+L+Y TD ML RE MS+P L +Y VI+LD+ HER++ATD+L+G+LK+V+ R +LKL+I
Sbjct: 157 ILRYCTDDMLQREMMSNPFLGSYGVIILDDIHERSMATDVLLGLLKDVLLARPELKLIIN 216
Query: 214 SATLDAGKFQQYFDNAPLMNVPGRTHPVEIFY 245
S+ K Y+ N PL+ V + HPVE Y
Sbjct: 217 SSPHLINKLSSYYGNVPLIQVKNK-HPVEAVY 247
Score = 94 (38.1 bits), Expect = 3.1e-56, Sum P(2) = 3.1e-56
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 258 PQCFTR-PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
P CF+ P A++AA F H DGDH TL+N+Y A++
Sbjct: 517 PNCFSHLPRGAEEAALSCWKTFLHPDGDHFTLINIYKAYQ 556
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 510 (184.6 bits), Expect = 3.5e-56, Sum P(2) = 3.5e-56
Identities = 95/212 (44%), Positives = 146/212 (68%)
Query: 36 NLQVNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIP 95
+L++NPF G PY+ RY++L ++R LP+++ + FM L QNQ +++ G++ GK++Q+P
Sbjct: 44 DLELNPFDGLPYSSRYYKLLKEREELPIWKEKYSFMESLLQNQVVLVSGDSKCGKSSQVP 103
Query: 96 QWCVEYSKSVGAK--AVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKT 153
QWC EY S+ + V CTQ + A+ +A RV++EMD +G EVGY I FE+C + +T
Sbjct: 104 QWCAEYCLSIHYQHGGVICTQVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTET 163
Query: 154 VLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIM 213
+L+Y TD ML RE MS+P L +Y VI+LD+ HER+LATD+L+G+LK+V+ R +LKL+I
Sbjct: 164 ILRYCTDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIIN 223
Query: 214 SATLDAGKFQQYFDNAPLMNVPGRTHPVEIFY 245
+ + Y+ N PL+ V + HPVE+ Y
Sbjct: 224 CSPFLISRLSSYYGNVPLLEVRNK-HPVEVVY 254
Score = 91 (37.1 bits), Expect = 3.5e-56, Sum P(2) = 3.5e-56
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 258 PQCFTR-PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
P CF P+ A++AA F H +GDH TL+N+Y+A++
Sbjct: 524 PSCFLHVPHGAEEAAVTCWKTFLHPEGDHFTLINIYNAYQ 563
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 516 (186.7 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
Identities = 106/216 (49%), Positives = 148/216 (68%)
Query: 41 PFTGYPYTPRYHE-LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCV 99
P P Y E + ++R LP+F+ R + + L VL+GETGSGKTTQIPQ+
Sbjct: 60 PPLAQPSASPYPEAVEQQRRNLPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYL- 118
Query: 100 EYSKSVGAKAV-ACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYM 158
Y +G +A+ A TQPRRVAA+S+A RVS+E +LG+ VGY++RF+D +S T +K++
Sbjct: 119 -YEGGIGRQAIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSDDTKIKFL 177
Query: 159 TDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADL-----KLVIM 213
TDGMLLRE +SD +L Y I+LDEAHERTL TD+L GV+K K+R +L K+++M
Sbjct: 178 TDGMLLREAISDCLLRKYSCIILDEAHERTLHTDVLFGVVKAAQKRRKELGKLPLKVLVM 237
Query: 214 SATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEP 249
SAT+D F QYF+ AP++ + GR HP++IFYT +P
Sbjct: 238 SATMDVDLFSQYFNGAPVLYLEGRQHPIQIFYTKQP 273
Score = 79 (32.9 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 264 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQRFG 300
P + + +F +GDHLTLLNVY FK G
Sbjct: 545 PPSRRDEVQSVRKKFVSSEGDHLTLLNVYRTFKNTGG 581
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 508 (183.9 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 105/215 (48%), Positives = 143/215 (66%)
Query: 46 PYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSV 105
PY E R++ LPVF+ R + L+ Q +V+VGETG GK+TQ+PQ+ E +
Sbjct: 41 PYAALSIEQQRQK--LPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTA 98
Query: 106 GAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSP-KTVLKYMTDGMLL 164
+ V TQPRRVAA++VA RV++E LG EVGY IRF+DC+ P T +K++TDGML+
Sbjct: 99 EGRVVGVTQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLV 158
Query: 165 REGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQ 224
RE M DP+L Y V++LDEAHERTL TDI +G+LK++ K+R DL+L++ SATLDA KF+
Sbjct: 159 REMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRD 218
Query: 225 YF----------DNAPLMNVPGRTHPVEIFYTPEP 249
+F D ++ V GRT PV+IFY P
Sbjct: 219 FFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSP 253
Score = 83 (34.3 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAF 295
F P+ K A +FA +GDHLT+LNVY AF
Sbjct: 521 FVFPSNQKSQATRVHRKFAVEEGDHLTMLNVYEAF 555
Score = 39 (18.8 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 5/12 (41%), Positives = 7/12 (58%)
Query: 239 HPVEIFYTPEPP 250
HP + Y +PP
Sbjct: 639 HPASVLYAEKPP 650
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 508 (183.9 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 105/215 (48%), Positives = 143/215 (66%)
Query: 46 PYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSV 105
PY E R++ LPVF+ R + L+ Q +V+VGETG GK+TQ+PQ+ E +
Sbjct: 41 PYAALSIEQQRQK--LPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTA 98
Query: 106 GAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSP-KTVLKYMTDGMLL 164
+ V TQPRRVAA++VA RV++E LG EVGY IRF+DC+ P T +K++TDGML+
Sbjct: 99 EGRVVGVTQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLV 158
Query: 165 REGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQ 224
RE M DP+L Y V++LDEAHERTL TDI +G+LK++ K+R DL+L++ SATLDA KF+
Sbjct: 159 REMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRD 218
Query: 225 YF----------DNAPLMNVPGRTHPVEIFYTPEP 249
+F D ++ V GRT PV+IFY P
Sbjct: 219 FFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSP 253
Score = 83 (34.3 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAF 295
F P+ K A +FA +GDHLT+LNVY AF
Sbjct: 521 FVFPSNQKSQATRVHRKFAVEEGDHLTMLNVYEAF 555
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 577 (208.2 bits), Expect = 1.5e-55, P = 1.5e-55
Identities = 113/198 (57%), Positives = 150/198 (75%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYS-KSVGAKAVAC 112
+ R LPV +Y+ E + + +NQ ++++GETGSGKTTQ+PQ+ VE G +A
Sbjct: 216 IQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAI 275
Query: 113 TQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSP-KTVLKYMTDGMLLREGMSDP 171
TQPRRVAA SVA RV++EM+ LG+EVGY IRFED ++P KTVLKYMTDGMLLRE ++D
Sbjct: 276 TQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDS 335
Query: 172 MLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPL 231
L Y I++DEAHERTLATDIL+G+LK+++ QR LKL+I SAT++A KF ++FDN P+
Sbjct: 336 KLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFFDNCPI 395
Query: 232 MNVPGRTHPVEIFYTPEP 249
NVPGR +PV+I YT +P
Sbjct: 396 FNVPGRRYPVDIHYTLQP 413
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 510 (184.6 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 115/243 (47%), Positives = 152/243 (62%)
Query: 21 RLATVNASVSTSIA-SNLQVNPFTGYPYTPRYHEL--HRKRITLPVFEYRTEFMTLLAQN 77
R T VS S +L N T Y P Y L ++R LPVF+ R + L+
Sbjct: 12 RPGTEGPGVSISEERQSLAENSATTVVYNP-YAALSIEQQRQKLPVFKLRNHILYLVENY 70
Query: 78 QCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQ 137
Q +V+VGETG GK+TQIPQ+ E + + V TQPRRVAA++VA RV+EE LG
Sbjct: 71 QTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGH 130
Query: 138 EVGYSIRFEDCSSP-KTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMG 196
EVGY IRF+DC+ P T +K++TDGML+RE M DP+L Y I+LDEAHERTL TDI +G
Sbjct: 131 EVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIG 190
Query: 197 VLKEVIKQRADLKLVIMSATLDAGKFQQYF----------DNAPLMNVPGRTHPVEIFYT 246
+LK++ ++R DL+L++ SATLDA KF+ +F D ++ V GRT PV+IFY
Sbjct: 191 LLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNETSDPTRDTCVILTVEGRTFPVDIFYL 250
Query: 247 PEP 249
P
Sbjct: 251 QSP 253
Score = 80 (33.2 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAF 295
F P K A +FA +GDHLT+LNVY AF
Sbjct: 521 FVVPGNQKSQAIRVHRKFAVEEGDHLTMLNVYEAF 555
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 512 (185.3 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 116/243 (47%), Positives = 152/243 (62%)
Query: 21 RLATVNASVSTSIA-SNLQVNPFTGYPYTPRYHEL--HRKRITLPVFEYRTEFMTLLAQN 77
R T VS S +L N T Y P Y L ++R LPVF+ R + L+
Sbjct: 12 RPGTEGPGVSISEERQSLAENSGTTVVYNP-YAALSIEQQRQKLPVFKLRNHILYLIENY 70
Query: 78 QCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQ 137
Q +V+VGETG GK+TQIPQ+ E + + V TQPRRVAA++VA RV+EE LG
Sbjct: 71 QTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGH 130
Query: 138 EVGYSIRFEDCSSP-KTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMG 196
EVGY IRF+DC+ T +K++TDGML+RE M DP+L Y VI+LDEAHERTL TDI +G
Sbjct: 131 EVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIG 190
Query: 197 VLKEVIKQRADLKLVIMSATLDAGKFQQYF----------DNAPLMNVPGRTHPVEIFYT 246
+LK++ K+R DL+L++ SATLDA KF+ +F D ++ V GRT PV+IFY
Sbjct: 191 LLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYL 250
Query: 247 PEP 249
P
Sbjct: 251 QSP 253
Score = 76 (31.8 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAF 295
F P K A +FA +GDHLT+LN+Y AF
Sbjct: 521 FVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAF 555
Score = 39 (18.8 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 5/12 (41%), Positives = 7/12 (58%)
Query: 239 HPVEIFYTPEPP 250
HP + Y +PP
Sbjct: 639 HPASVLYAEKPP 650
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 512 (185.3 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 116/243 (47%), Positives = 152/243 (62%)
Query: 21 RLATVNASVSTSIA-SNLQVNPFTGYPYTPRYHEL--HRKRITLPVFEYRTEFMTLLAQN 77
R T VS S +L N T Y P Y L ++R LPVF+ R + L+
Sbjct: 12 RPGTEGPGVSISEERQSLAENSGTTVVYNP-YAALSIEQQRQKLPVFKLRNHILYLIENY 70
Query: 78 QCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQ 137
Q +V+VGETG GK+TQIPQ+ E + + V TQPRRVAA++VA RV+EE LG
Sbjct: 71 QTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGH 130
Query: 138 EVGYSIRFEDCSSP-KTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMG 196
EVGY IRF+DC+ T +K++TDGML+RE M DP+L Y VI+LDEAHERTL TDI +G
Sbjct: 131 EVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIG 190
Query: 197 VLKEVIKQRADLKLVIMSATLDAGKFQQYF----------DNAPLMNVPGRTHPVEIFYT 246
+LK++ K+R DL+L++ SATLDA KF+ +F D ++ V GRT PV+IFY
Sbjct: 191 LLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYL 250
Query: 247 PEP 249
P
Sbjct: 251 QSP 253
Score = 76 (31.8 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAF 295
F P K A +FA +GDHLT+LN+Y AF
Sbjct: 521 FVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAF 555
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 508 (183.9 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 110/227 (48%), Positives = 147/227 (64%)
Query: 36 NLQVNPFTGYPYTPRYHEL--HRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQ 93
+L N T Y P Y L ++R LPVF+ R + L+ Q +V+VGETG GK+TQ
Sbjct: 20 SLAENSATTVVYNP-YAALSIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQ 78
Query: 94 IPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSP-K 152
IPQ+ E + + V TQPRRVAA++VA RV+EE LG EVGY IRF+DC+ P
Sbjct: 79 IPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLA 138
Query: 153 TVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVI 212
T +K++TDGML+RE M DP+L Y I+LDEAHERTL TDI +G+LK++ ++R DL+L++
Sbjct: 139 TRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLV 198
Query: 213 MSATLDAGKFQQYF----------DNAPLMNVPGRTHPVEIFYTPEP 249
SATLDA KF+ +F D ++ V GRT PV+IFY P
Sbjct: 199 ASATLDAEKFRDFFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQSP 245
Score = 80 (33.2 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAF 295
F P K A +FA +GDHLT+LNVY AF
Sbjct: 513 FVVPGNQKSQAIRVHRKFAVEEGDHLTMLNVYEAF 547
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 520 (188.1 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 104/201 (51%), Positives = 150/201 (74%)
Query: 53 ELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAKAV 110
++ +R LP++E + N+ IV+VGETGSGK+TQIPQ+ E Y++ G V
Sbjct: 88 DILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQE-GC--V 144
Query: 111 ACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSD 170
A TQPRRVAA+++A+RV+ E C+LG++VGYSIRF+D +S KT +KY+TDGMLLRE ++D
Sbjct: 145 AITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELIND 204
Query: 171 PMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAP 230
P+L Y ++LDEAHERTL TD+L+G +K++IK+R L+++IMSATL+A +F ++FD A
Sbjct: 205 PILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFFDGAE 264
Query: 231 LMNVPGRTHPVEIFYT--PEP 249
+ + GR +PV+I YT PEP
Sbjct: 265 ICYISGRQYPVQIHYTYTPEP 285
Score = 67 (28.6 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAF 295
F P E + A +A+++F H +GD LT LN +
Sbjct: 548 FLFPQEKRDEAIEARLKFLHSEGDLLTCLNALRQY 582
>UNIPROTKB|Q7L7V1 [details] [associations]
symbol:DHX32 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32" species:9606 "Homo sapiens"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 PROSITE:PS51194 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 EMBL:CH471066 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 EMBL:AY064247 EMBL:AL360176
UniGene:Hs.370292 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOVERGEN:HBG039428 EMBL:AF427340 EMBL:AF427341 EMBL:AY064250
EMBL:AK001556 EMBL:AK001751 EMBL:AK024869 EMBL:BC002473
EMBL:BC037925 EMBL:BC068471 EMBL:AL162051 IPI:IPI00334601
IPI:IPI00644447 PIR:T47184 RefSeq:NP_060650.2
ProteinModelPortal:Q7L7V1 SMR:Q7L7V1 IntAct:Q7L7V1 STRING:Q7L7V1
PhosphoSite:Q7L7V1 DMDM:74759011 PRIDE:Q7L7V1 DNASU:55760
Ensembl:ENST00000284688 Ensembl:ENST00000284690
Ensembl:ENST00000368721 Ensembl:ENST00000415732 GeneID:55760
KEGG:hsa:55760 UCSC:uc001lje.1 UCSC:uc001ljf.1 CTD:55760
GeneCards:GC10M127515 HGNC:HGNC:16717 HPA:HPA048872 MIM:607960
neXtProt:NX_Q7L7V1 PharmGKB:PA27219 InParanoid:Q7L7V1 OMA:LACEQDI
OrthoDB:EOG4N30NF PhylomeDB:Q7L7V1 ChiTaRS:DHX32 GenomeRNAi:55760
NextBio:60779 Bgee:Q7L7V1 Genevestigator:Q7L7V1 Uniprot:Q7L7V1
Length = 743
Score = 506 (183.2 bits), Expect = 3.7e-55, Sum P(2) = 3.7e-55
Identities = 95/215 (44%), Positives = 145/215 (67%)
Query: 36 NLQVNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIP 95
+L++NPF G PY+ RY++L ++R LP+++ + FM L QNQ +++ G+ GK+ Q+P
Sbjct: 37 DLELNPFDGLPYSSRYYKLLKEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVP 96
Query: 96 QWCVEYSKSVGAK--AVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKT 153
QWC EY S+ + V CTQ + + +A RV++EMD +G EVGY I FE+C + +T
Sbjct: 97 QWCAEYCLSIHYQHGGVICTQVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNET 156
Query: 154 VLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIM 213
+L+Y TD ML RE MS+P L +Y VI+LD+ HER++ATD+L+G+LK+V+ R +LKL+I
Sbjct: 157 ILRYCTDDMLQREMMSNPFLGSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIIN 216
Query: 214 SATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPE 248
S+ K Y+ N P++ V + HPVE+ Y E
Sbjct: 217 SSPHLISKLNSYYGNVPVIEVKNK-HPVEVVYLSE 250
Score = 85 (35.0 bits), Expect = 3.7e-55, Sum P(2) = 3.7e-55
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 258 PQCFTR-PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
P CF+ P+ A++AA F H +GDH TL+++Y A++
Sbjct: 516 PNCFSHVPHGAEEAALTCWKTFLHPEGDHFTLISIYKAYQ 555
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 507 (183.5 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 102/210 (48%), Positives = 146/210 (69%)
Query: 46 PYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSV 105
PY P EL R+ +LP+F+ R + + L VL+GETGSGKTTQIPQ+ Y +
Sbjct: 62 PY-PEAVELQRR--SLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYL--YEGGI 116
Query: 106 GAKAV-ACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLL 164
+ + A TQPRRVAA+S+A RVS+E +LG+ VGY++RF+D +S T +K++TDGMLL
Sbjct: 117 SRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLL 176
Query: 165 REGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADL-----KLVIMSATLDA 219
RE +SD +L Y ++LDEAHERT+ TD+L GV+K K+R +L K+++MSAT+D
Sbjct: 177 REAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDV 236
Query: 220 GKFQQYFDNAPLMNVPGRTHPVEIFYTPEP 249
F QYF+ AP++ + GR HP+++FYT +P
Sbjct: 237 DLFSQYFNGAPVLYLEGRQHPIQVFYTKQP 266
Score = 75 (31.5 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 264 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQRFG 300
P ++ + +F +GDH+TLLN+Y FK G
Sbjct: 538 PPSRREEVQGVRKKFISSEGDHMTLLNIYRTFKNLGG 574
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 508 (183.9 bits), Expect = 1.8e-54, Sum P(2) = 1.8e-54
Identities = 104/216 (48%), Positives = 145/216 (67%)
Query: 41 PFTGYPYTPRYHE-LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCV 99
P P Y E L +R +LP+F R + + L VL+GETGSGKTTQIPQ+
Sbjct: 44 PPLAQPSASPYREALELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYL- 102
Query: 100 EYSKSVGAKAV-ACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYM 158
Y + + + A TQPRRVAA+S+A RVS+E +LG+ VGY++RFED +S T +K++
Sbjct: 103 -YEGGISRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFL 161
Query: 159 TDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADL-----KLVIM 213
TDGMLLRE +SD +L Y ++LDEAHERT+ TD+L GV+K K+R +L K+++M
Sbjct: 162 TDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVM 221
Query: 214 SATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEP 249
SAT+D F QYF+ AP++ + GR HP++IFYT +P
Sbjct: 222 SATMDVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQP 257
Score = 72 (30.4 bits), Expect = 1.8e-54, Sum P(2) = 1.8e-54
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 264 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
P + + +F +GDH+TLLN+Y FK
Sbjct: 529 PPARRDEVQSVRKKFISSEGDHITLLNIYRTFK 561
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 503 (182.1 bits), Expect = 1.4e-53, Sum P(2) = 1.4e-53
Identities = 102/238 (42%), Positives = 159/238 (66%)
Query: 19 EERLATVNASVSTSIASNLQVNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQ 78
EER +T NA + I L+V+ PY + ++RI LP+F+ R + + + +
Sbjct: 41 EER-STENAGAAPPIEEQLKVH---NNPYASL--NIQQQRIRLPIFKNRGHILYMCERYR 94
Query: 79 CIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQE 138
I++VGETG GK+TQ+PQ+ +E + + + TQPRRVA +++A RV+EE DC LG +
Sbjct: 95 TIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVITQPRRVAVVTLATRVAEEKDCILGHD 154
Query: 139 VGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVL 198
VGY++RF+D S T +K+MTDG+LLRE ++DP+L Y +I++DEAHER+ TDIL+G+L
Sbjct: 155 VGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLL 214
Query: 199 KEVIKQRADLKLVIMSATLDAGKFQQYF----------DNAPLMNVPGRTHPVEIFYT 246
+++I+ R DL++++ SATLDA F+ +F D A +++V GRTHPV + +T
Sbjct: 215 RKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHT 272
Score = 72 (30.4 bits), Expect = 1.4e-53, Sum P(2) = 1.4e-53
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAF 295
F P + AD + +FA +GDH+T+LNV+ F
Sbjct: 540 FITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKF 574
>UNIPROTKB|F1SDM5 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
OMA:LACEQDI EMBL:CT841550 Ensembl:ENSSSCT00000011756 Uniprot:F1SDM5
Length = 742
Score = 490 (177.5 bits), Expect = 5.2e-53, Sum P(2) = 5.2e-53
Identities = 99/248 (39%), Positives = 155/248 (62%)
Query: 1 MSKRRLDVIDPYITKKNREERLATVNASVSTSIA-SNLQVNPFTGYPYTPRYHELHRKRI 59
M + LD K+ E L + + +A +L++NPF G PY+ RY++L ++R
Sbjct: 1 MEEEELDCPKSSSEKRYFPESLDSSDGDEEGILACEDLELNPFDGLPYSSRYYKLLKERE 60
Query: 60 TLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAK--AVACTQPRR 117
LP+++ + FM L Q+Q +++ G+ GK++Q+PQWC EY S+ + V CTQ +
Sbjct: 61 DLPIWKEKYSFMENLLQSQVVIVSGDATCGKSSQVPQWCAEYCLSIHYQHGGVVCTQVHK 120
Query: 118 VAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQ 177
A+ +A RV++EMD +G EVGY I FE+C + +T+L+Y TD ML RE MS+P L +Y
Sbjct: 121 QTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSETILRYCTDDMLQREMMSNPFLGSYG 180
Query: 178 VILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGR 237
VI+LD+ ER++ATD+L+G+LK+V+ R +LKL+I S+ Y+ N PL+ V +
Sbjct: 181 VIILDDVQERSIATDVLLGLLKDVLLARPELKLIINSSPHLISTLSSYYGNVPLIEVTSK 240
Query: 238 THPVEIFY 245
PVE+ Y
Sbjct: 241 -RPVEVVY 247
Score = 83 (34.3 bits), Expect = 5.2e-53, Sum P(2) = 5.2e-53
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 258 PQCFTR-PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
P CF+ P+ A+ A F H +GDH TL+N+Y AF+
Sbjct: 518 PNCFSHLPSGAEAEALTCWKTFLHPEGDHFTLVNLYKAFQ 557
>UNIPROTKB|F1NH89 [details] [associations]
symbol:LOC768812 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 OMA:LACEQDI EMBL:AADN02057061
EMBL:AADN02057062 IPI:IPI00683398 Ensembl:ENSGALT00000023318
Uniprot:F1NH89
Length = 764
Score = 488 (176.8 bits), Expect = 9.1e-53, Sum P(2) = 9.1e-53
Identities = 92/217 (42%), Positives = 142/217 (65%)
Query: 36 NLQVNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIP 95
+L++NPF G PY+ RY++L ++R LPV++ R FM L +Q +++ G+ +GK++Q+P
Sbjct: 47 DLELNPFDGLPYSSRYYKLMKERQELPVWKVRCAFMESLLHHQIVIVSGDAKTGKSSQVP 106
Query: 96 QWCVEYSKSVGAK--AVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKT 153
QWC E+ + G + A C+Q A+ +A R ++EMD +G EVGY + FE C + +T
Sbjct: 107 QWCAEHCLAAGCRHGAAVCSQAHGQVAVRLALRAADEMDVNIGHEVGYFVPFESCCTAET 166
Query: 154 VLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIM 213
+L+Y TD ML RE MS P+L +Y VI+LD+ HERT+ TD+L+GVLK V++ R L+LVI+
Sbjct: 167 ILRYCTDDMLQREMMSAPLLNSYGVIILDDVHERTVPTDVLLGVLKHVLRARPALRLVIL 226
Query: 214 SATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEPP 250
+A + K Q + + PL+ V H E+ YT P
Sbjct: 227 TAPHMSSKLQDFCGSVPLIRVENE-HQAEVVYTCSMP 262
Score = 85 (35.0 bits), Expect = 9.1e-53, Sum P(2) = 9.1e-53
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 258 PQCFTR-PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
P CF P+ ++ A +F+H GDH TL+NV++AF++
Sbjct: 528 PNCFLHTPSGTEEIALTCWRKFSHPAGDHFTLINVFNAFRE 568
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 513 (185.6 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 99/194 (51%), Positives = 149/194 (76%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAKAVACTQPRRV 118
LP+ ++ + + + +N +V++GETGSGK+TQ+ Q Y+KS G +A TQPRRV
Sbjct: 4 LPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKS-GV--IAITQPRRV 60
Query: 119 AAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQV 178
AA+SVA+RV++E+D LG++VGY+IRFED ++ KT +KY+TDG+LLRE +S+PML++Y V
Sbjct: 61 AAVSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSV 120
Query: 179 ILLDEAHERTLATDILMGVLKEVIKQRA-DLKLVIMSATLDAGKFQQYFDNAPLMNVPGR 237
I+LDEAHER+L TDIL+G++K +++ RA + K++I SATLD K ++F P++NVPG+
Sbjct: 121 IILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGK 180
Query: 238 THPVEIFYTPEPPL 251
+PVEI Y+ E P+
Sbjct: 181 LYPVEILYSKERPV 194
Score = 49 (22.3 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 262 TRPNEAKKAAD-DAKMRFAHIDGDHLTLLNVYHAF 295
++P+E K+ D D+ + GDH+ LL ++ ++
Sbjct: 466 SKPSEKKRKHDEDSNLPNGSGYGDHIQLLQIFESW 500
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 395 (144.1 bits), Expect = 2.4e-52, Sum P(3) = 2.4e-52
Identities = 80/177 (45%), Positives = 119/177 (67%)
Query: 32 SIASNLQVNPF--TGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSG 89
S N + NP T P++ R ++ R +LP+ + + +N +++VGETGSG
Sbjct: 11 SFVQNSRPNPKSPTVSPFSMR-QKIAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSG 69
Query: 90 KTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCS 149
KTTQ+PQ+ K + TQPRR+AA++VA+RV+EE + QLGQ+VGYSIRF+D +
Sbjct: 70 KTTQLPQFLYNAGFCREGKMIGITQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTT 129
Query: 150 SPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRA 206
S T LKYMTDG+LLRE + DP L Y VI++DEAH+R++ TD+L+ +LK++ + R+
Sbjct: 130 SGSTRLKYMTDGLLLREALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRS 186
Score = 119 (46.9 bits), Expect = 2.4e-52, Sum P(3) = 2.4e-52
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 196 GVLKEVIKQR-ADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEP 249
GVLK ++ + LKL+IMSA+LDA F +YF A ++V GR PV+I YT P
Sbjct: 216 GVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHP 270
Score = 78 (32.5 bits), Expect = 2.4e-52, Sum P(3) = 2.4e-52
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVY 292
F P E ++ A +K FA ++GDHLT L+VY
Sbjct: 536 FYDPREKREEARTSKNHFASVEGDHLTYLSVY 567
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 471 (170.9 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
Identities = 94/194 (48%), Positives = 137/194 (70%)
Query: 33 IASNLQVNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTT 92
+AS L V G + P L++ LP+ ++ + L+ ++VG+TGSGKTT
Sbjct: 1 MASELDV----GTSFIP---SLYKPASLLPIARHKQSILYLVETYPVTIVVGQTGSGKTT 53
Query: 93 QIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPK 152
Q+PQ+ + KA+A TQPRRVAA +VA RV+EEM C+LG++VGYSIRFED +S
Sbjct: 54 QLPQYLDQAGWCTEGKAIAVTQPRRVAATTVAARVAEEMRCKLGEDVGYSIRFEDRTSAM 113
Query: 153 TVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVI 212
T +K++TDGMLLRE + DP+L Y VI++DEAHER+L+TDIL+G+LK+++K+R +L++++
Sbjct: 114 TRIKFLTDGMLLREALVDPLLSRYSVIMVDEAHERSLSTDILLGILKKILKRRPELRIIV 173
Query: 213 MSATLDAGKFQQYF 226
SATL A F +YF
Sbjct: 174 SSATLQAEDFLRYF 187
Score = 83 (34.3 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 268 KKAADDAKMRFAHIDGDHLTLLNVYHAF 295
KK+++ ++ +FA +GDHLT LNVY AF
Sbjct: 499 KKSSESSRRKFAVEEGDHLTYLNVYQAF 526
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 497 (180.0 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 99/199 (49%), Positives = 142/199 (71%)
Query: 53 ELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAKAV 110
EL + + +LP+++ + E + + N I++VGETGSGKTTQI Q+ E Y ++ G +
Sbjct: 471 ELLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRN-GI--I 527
Query: 111 ACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSD 170
CTQPRRVAA+SVA RVS EM+ +G VGY+IRFED ++ T ++Y+TDG+LLRE ++D
Sbjct: 528 CCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLND 587
Query: 171 PMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAP 230
L+ Y VI++DEAHER++ TD+L+G+LK + +R DLKL++ SAT+DA KF +F NAP
Sbjct: 588 KELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFGNAP 647
Query: 231 LMNVPGRTHPVEIFYTPEP 249
+ N+ GRT V I Y P
Sbjct: 648 IYNIQGRTFKVHIEYLRTP 666
Score = 69 (29.3 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 258 PQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVY 292
P F E ++ + K +F + DHLTLLN+Y
Sbjct: 978 PSIFLESKENNESIESKKEKFTVPESDHLTLLNIY 1012
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 497 (180.0 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 99/199 (49%), Positives = 142/199 (71%)
Query: 53 ELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAKAV 110
EL + + +LP+++ + E + + N I++VGETGSGKTTQI Q+ E Y ++ G +
Sbjct: 471 ELLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRN-GI--I 527
Query: 111 ACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSD 170
CTQPRRVAA+SVA RVS EM+ +G VGY+IRFED ++ T ++Y+TDG+LLRE ++D
Sbjct: 528 CCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLND 587
Query: 171 PMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAP 230
L+ Y VI++DEAHER++ TD+L+G+LK + +R DLKL++ SAT+DA KF +F NAP
Sbjct: 588 KELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFGNAP 647
Query: 231 LMNVPGRTHPVEIFYTPEP 249
+ N+ GRT V I Y P
Sbjct: 648 IYNIQGRTFKVHIEYLRTP 666
Score = 69 (29.3 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 258 PQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVY 292
P F E ++ + K +F + DHLTLLN+Y
Sbjct: 978 PSIFLESKENNESIESKKEKFTVPESDHLTLLNIY 1012
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 427 (155.4 bits), Expect = 3.4e-50, Sum P(3) = 3.4e-50
Identities = 90/186 (48%), Positives = 132/186 (70%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACT 113
+ ++RI+LP+++ R + LL + +V++G TG GK+TQIPQ+ E S G + + CT
Sbjct: 48 IQQQRISLPIYQNRKHILYLLEKYSTLVIIGNTGCGKSTQIPQYLFESGWSDGFRTILCT 107
Query: 114 QPRRVAAMSVAQRVSEEMDCQ-LGQEVGYSIRFED-CSSPKTVLKYMTDGMLLREGMSDP 171
QPRRVAA+S+A+RV++EM Q +G+ VGYS+RF++ S +T +KY+TDGML+RE M DP
Sbjct: 108 QPRRVAAISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIETRIKYVTDGMLIREMMLDP 167
Query: 172 MLENYQVILLDEAHERTLATDILMGVLKEVIKQRAD----------LKLVIMSATLDAGK 221
+L Y VI++DEAHER+L TD+LMG+LK+V K+R LKL+I SATL+A
Sbjct: 168 LLLKYSVIMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNSLKLIISSATLNAND 227
Query: 222 FQQYFD 227
F +F+
Sbjct: 228 FFNFFN 233
Score = 82 (33.9 bits), Expect = 3.4e-50, Sum P(3) = 3.4e-50
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 208 LKLVIMSATLDAGKFQQYF----------DNAPLMNVPGRTHPVEIFYTPE 248
LKL+I SATL+A F +F D + ++++ GRT+PV+I Y E
Sbjct: 214 LKLIISSATLNANDFFNFFNYNQTNDKSKDTSTILSIEGRTYPVDIHYLEE 264
Score = 59 (25.8 bits), Expect = 3.4e-50, Sum P(3) = 3.4e-50
Identities = 9/14 (64%), Positives = 14/14 (100%)
Query: 282 DGDHLTLLNVYHAF 295
+GDHLTLLN++++F
Sbjct: 562 EGDHLTLLNIFNSF 575
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 493 (178.6 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 94/187 (50%), Positives = 133/187 (71%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAA 120
LPV E R E + QNQ +++ GETGSGKTTQ+P+ C+E + + + TQPRR+AA
Sbjct: 74 LPVSERRGEIAEAIRQNQVVIVCGETGSGKTTQLPKICLEAGRGIQGY-IGHTQPRRIAA 132
Query: 121 MSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVIL 180
SVA R+++E+ LG+ VGY +RF D + P +++K MTDG+LL E +D L+ Y ++
Sbjct: 133 RSVAARIADELKRPLGETVGYKVRFHDQTRPDSLIKLMTDGILLAETQTDRFLDQYDTLI 192
Query: 181 LDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHP 240
+DEAHER+L D L+G LK ++ +R DLKLVI SAT+D +F ++FDNAP++ VPGRT+P
Sbjct: 193 VDEAHERSLNIDFLLGYLKWLLPRRHDLKLVITSATIDPERFSRHFDNAPIVRVPGRTYP 252
Query: 241 VEIFYTP 247
VEI Y P
Sbjct: 253 VEIRYRP 259
Score = 64 (27.6 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 257 LPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQR 298
+P RP + +AAD RF H D D + +L +++ ++++
Sbjct: 522 VPDPRERPADKAQAADQKHARFRHPDSDFMAILALWNDYEEQ 563
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 461 (167.3 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 91/174 (52%), Positives = 127/174 (72%)
Query: 82 LVGETGSGKTTQIPQWCVEYSKSVGAKAV-ACTQPRRVAAMSVAQRVSEEMDCQLGQEVG 140
L GETGSGKTTQ+PQ+ Y +G + V A TQPRRVAA+S+A RVS+E +LG+ VG
Sbjct: 4 LSGETGSGKTTQLPQYL--YEGGIGRQGVIAVTQPRRVAAISLATRVSDEKRTELGKLVG 61
Query: 141 YSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKE 200
Y++RF+D SS T +K++TDGMLLRE +SD +L Y I+LDEAHERT+ TD+L GV+K
Sbjct: 62 YTVRFDDVSSEDTRIKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVVKA 121
Query: 201 VIKQRADL-----KLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEP 249
++R +L K+++MSAT+D F QYF+ A ++ + GR HP+++FYT +P
Sbjct: 122 AQRRRKELRKLPLKVIVMSATMDVDLFSQYFNGASVLYLEGRQHPIQVFYTKQP 175
Score = 71 (30.1 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 264 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQRFG 300
P + + +F +GDH+TLLN+Y FK G
Sbjct: 447 PPSRRDEVQAMRKKFLSSEGDHITLLNIYRTFKSLGG 483
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 466 (169.1 bits), Expect = 3.9e-49, Sum P(2) = 3.9e-49
Identities = 89/187 (47%), Positives = 129/187 (68%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAA 120
LPV + R + +A +Q +++ GETGSGKTTQ+P+ C E + + TQPRR+AA
Sbjct: 87 LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYG-LIGHTQPRRLAA 145
Query: 121 MSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVIL 180
SVA R++EEM+ +LG VGY +RF D S +T +K MTDG+LL E +D L Y I+
Sbjct: 146 RSVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTII 205
Query: 181 LDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHP 240
+DEAHER+L D ++G LK+++ +R DLK++I SAT+D +F ++F NAP++ V GRT+P
Sbjct: 206 IDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYP 265
Query: 241 VEIFYTP 247
VE+ Y P
Sbjct: 266 VEVRYRP 272
Score = 88 (36.0 bits), Expect = 3.9e-49, Sum P(2) = 3.9e-49
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 263 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQR 298
RP++ +++ADD RF H D D LTL+N++H Q+
Sbjct: 544 RPSDKQQSADDKHRRFNHEDSDFLTLVNLWHYIGQQ 579
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 466 (169.1 bits), Expect = 3.9e-49, Sum P(2) = 3.9e-49
Identities = 89/187 (47%), Positives = 129/187 (68%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAA 120
LPV + R + +A +Q +++ GETGSGKTTQ+P+ C E + + TQPRR+AA
Sbjct: 87 LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYG-LIGHTQPRRLAA 145
Query: 121 MSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVIL 180
SVA R++EEM+ +LG VGY +RF D S +T +K MTDG+LL E +D L Y I+
Sbjct: 146 RSVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTII 205
Query: 181 LDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHP 240
+DEAHER+L D ++G LK+++ +R DLK++I SAT+D +F ++F NAP++ V GRT+P
Sbjct: 206 IDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYP 265
Query: 241 VEIFYTP 247
VE+ Y P
Sbjct: 266 VEVRYRP 272
Score = 88 (36.0 bits), Expect = 3.9e-49, Sum P(2) = 3.9e-49
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 263 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQR 298
RP++ +++ADD RF H D D LTL+N++H Q+
Sbjct: 544 RPSDKQQSADDKHRRFNHEDSDFLTLVNLWHYIGQQ 579
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 512 (185.3 bits), Expect = 4.9e-49, P = 4.9e-49
Identities = 113/273 (41%), Positives = 175/273 (64%)
Query: 9 IDPYI--TKKNREERLATVNASVSTSIASNLQVNPFTGYPYTP---RYHELHRKRITLPV 63
I P+ T+ R ++ N S S+ + N Y R +L + R TLPV
Sbjct: 24 IHPFTNNTRIKRASKIVKFNDSGEGDHVSDQRSNKENVLTYKSLKSRASDLLKMRETLPV 83
Query: 64 FEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--Y-SKSVGAKAVACTQPRRVAA 120
++++ E M+ + N VL+GETGSGK+TQIPQ+ +E Y +K G+ +A TQPRRVAA
Sbjct: 84 YQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGS--IAVTQPRRVAA 141
Query: 121 MSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVIL 180
+++A RV++E C+LG++VGYS+RF++ ++ +T LKY+TDGMLLRE M + L Y VI+
Sbjct: 142 INLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNSDLREYSVIV 201
Query: 181 LDEAHERTLATDILMGVLKEVIK-QRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTH 239
+DEAHERT+ TD+++G LK +I+ R DL++++MSATL A KF ++F+NAP++ V GR
Sbjct: 202 IDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPILFVEGRKF 261
Query: 240 PVEIFYTPEPPLGAGPWLPQCFTRPNEAKKAAD 272
V+ +Y P + +C + N+ ++ D
Sbjct: 262 DVKQYYLKAPTDDIVDAVIRCCIQINQGEELGD 294
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 451 (163.8 bits), Expect = 3.4e-48, Sum P(2) = 3.4e-48
Identities = 89/212 (41%), Positives = 141/212 (66%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACT 113
LH+ LP+ ++ + ++ N V+VG+TGSGKTTQIPQ+ + K + T
Sbjct: 14 LHKPSSLLPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQFLEKAGWCSDGKLIGVT 73
Query: 114 QPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPML 173
QPRR+AA +VA RV+EE ++G+EVGYSIRFED +S T +K++TDG+L+RE + DP+L
Sbjct: 74 QPRRIAATTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREALVDPLL 133
Query: 174 ENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNA---- 229
Y ++++DEAHER+++TDIL+G+LK++ K+R +L+++I SATL A +F +F +
Sbjct: 134 SRYSIVMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAFFSSTLGGS 193
Query: 230 ------P------LMNVPGRTHPVEIFYTPEP 249
P ++++ GRT+P++I Y P
Sbjct: 194 RQDREEPQGTIGTIVSLEGRTYPIDILYLESP 225
Score = 74 (31.1 bits), Expect = 3.4e-48, Sum P(2) = 3.4e-48
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 268 KKAADDAKMRFAHIDGDHLTLLNVYHAF 295
+K + + +FA +GDHLT LNVY AF
Sbjct: 499 RKQFESRRRKFAAGEGDHLTFLNVYQAF 526
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 499 (180.7 bits), Expect = 1.7e-47, P = 1.7e-47
Identities = 91/193 (47%), Positives = 139/193 (72%)
Query: 55 HRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQ 114
H + LP+++Y+ + + + +N +++ GETGSGKTTQ+PQ+ + S + + TQ
Sbjct: 12 HHESKKLPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLSRNGR-IGVTQ 70
Query: 115 PRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLE 174
PRRVAA++VAQRVS EM +LG+EVGY +RF+DCS+ T++KYMTDG LLRE ++DP L
Sbjct: 71 PRRVAAITVAQRVSSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCLLREILADPSLT 130
Query: 175 NYQVILLDEAHERTLATDILMGVLKEVIKQ-----RADLKLVIMSATLDAGKFQQYFDNA 229
Y +++LDEAHER+L TD+L+G+LK+ + + + LK+V+MSATL+ K ++ N
Sbjct: 131 QYSIVILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKVVVMSATLETEKLSSFYGNC 190
Query: 230 PLMNVPGRTHPVE 242
P+ +PGRT+PV+
Sbjct: 191 PVFTIPGRTYPVK 203
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 469 (170.2 bits), Expect = 5.9e-47, Sum P(2) = 5.9e-47
Identities = 89/188 (47%), Positives = 132/188 (70%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA-VACTQPRRVA 119
LPV R + ++ NQ +++ GETGSGKTTQ+P+ C+E +G++ + TQPRR+A
Sbjct: 76 LPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELG--LGSRGFIGHTQPRRLA 133
Query: 120 AMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVI 179
A SVA RV+EE+ LG+ VG+ +RF D ++ +K MTDG+LL E SD L+ Y I
Sbjct: 134 ARSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTI 193
Query: 180 LLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTH 239
++DEAHER+L D ++G LK+++K+R DLK++I SAT+D +F ++F+NAP++ V GRT+
Sbjct: 194 IIDEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTY 253
Query: 240 PVEIFYTP 247
PVE Y P
Sbjct: 254 PVETRYRP 261
Score = 64 (27.6 bits), Expect = 5.9e-47, Sum P(2) = 5.9e-47
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 263 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQR 298
RP + K+A+D+A RFA D ++ +N++ K++
Sbjct: 529 RPMDKKQASDEAHRRFADPQSDFVSWVNLWQHLKEQ 564
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 469 (170.2 bits), Expect = 5.9e-47, Sum P(2) = 5.9e-47
Identities = 89/188 (47%), Positives = 132/188 (70%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA-VACTQPRRVA 119
LPV R + ++ NQ +++ GETGSGKTTQ+P+ C+E +G++ + TQPRR+A
Sbjct: 76 LPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELG--LGSRGFIGHTQPRRLA 133
Query: 120 AMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVI 179
A SVA RV+EE+ LG+ VG+ +RF D ++ +K MTDG+LL E SD L+ Y I
Sbjct: 134 ARSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTI 193
Query: 180 LLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTH 239
++DEAHER+L D ++G LK+++K+R DLK++I SAT+D +F ++F+NAP++ V GRT+
Sbjct: 194 IIDEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTY 253
Query: 240 PVEIFYTP 247
PVE Y P
Sbjct: 254 PVETRYRP 261
Score = 64 (27.6 bits), Expect = 5.9e-47, Sum P(2) = 5.9e-47
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 263 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQR 298
RP + K+A+D+A RFA D ++ +N++ K++
Sbjct: 529 RPMDKKQASDEAHRRFADPQSDFVSWVNLWQHLKEQ 564
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 439 (159.6 bits), Expect = 3.4e-46, Sum P(3) = 3.4e-46
Identities = 86/215 (40%), Positives = 142/215 (66%)
Query: 40 NPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCV 99
N F TP+Y +L ++R LPVF++R + L +++ +V+ GETGSGK+TQ+P + +
Sbjct: 551 NLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLL 610
Query: 100 E---YSKSVGAKA-VACTQPRRVAAMSVAQRVSEEMDCQLGQE-----VGYSIRFEDCSS 150
E ++ +K + CTQPRR++A+S+A RV +E+ C+ G GY IR E +
Sbjct: 611 EDLLLNEWEASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRAC 670
Query: 151 PKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKL 210
T L Y T G+LLR+ D +L N +++DE HER++ +D L+ +LKE++++R+DL L
Sbjct: 671 ESTRLLYCTTGVLLRKLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHL 730
Query: 211 VIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFY 245
++MSAT+D+ KF YF + P++ + GR++PVE+F+
Sbjct: 731 ILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 765
Score = 75 (31.5 bits), Expect = 3.4e-46, Sum P(3) = 3.4e-46
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
FT P K AD AK A D DHLT+ N Y +K+
Sbjct: 1111 FTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKK 1147
Score = 37 (18.1 bits), Expect = 3.4e-46, Sum P(3) = 3.4e-46
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 15 KKNREERLATVNASVSTSIASNLQ 38
KK++ A V A+VS S A + +
Sbjct: 6 KKHKAPAAAVVRAAVSASRAKSAE 29
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 474 (171.9 bits), Expect = 3.9e-46, Sum P(2) = 3.9e-46
Identities = 98/222 (44%), Positives = 139/222 (62%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
R +L R+R LP+ +Y + +L ++Q +V+ G+TG GK+TQ+PQ Y + G
Sbjct: 151 RLAKLQRERAALPIAQYGHHILQMLKEHQVVVVAGDTGCGKSTQVPQ----YLLAAGCSH 206
Query: 110 VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS 169
VACTQPRR+A +S+A+RV E Q G +VGY IRFE S T + ++T G+LLR+
Sbjct: 207 VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQMQR 266
Query: 170 DPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNA 229
+P L YQV+++DE HER L D L+GVL+ ++ QR DLK+V+MSAT++ F YF NA
Sbjct: 267 EPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVVLMSATINISLFSSYFGNA 326
Query: 230 PLMNVPGRTHPVEIFYTP---EPPLGAGPWL-PQCFTRPNEA 267
P++ VPGR P+ + Y P EP L P+ F R EA
Sbjct: 327 PVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLEA 368
Score = 49 (22.3 bits), Expect = 3.9e-46, Sum P(2) = 3.9e-46
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 243 IFYTPEPPL--GAGPWLPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
+F+ EP L A + FTR ++ + GD TLLNV++ + Q
Sbjct: 598 MFHLAEPVLTIAAALSVQTPFTRSAQSNPECAATRRPLESDQGDPFTLLNVFNTWVQ 654
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 461 (167.3 bits), Expect = 7.4e-46, Sum P(2) = 7.4e-46
Identities = 98/226 (43%), Positives = 151/226 (66%)
Query: 26 NAS-VSTSIASNLQVNPFTGYP-YTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLV 83
NA+ +ST S+ Q +P P + Y + R + LP+ + M LA + ++++
Sbjct: 130 NATPMSTRKHSSSQQSP----PHFEANYEKFSRPQ--LPIDAVEQQLMYELASQETLIVI 183
Query: 84 GETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSI 143
GETGSGK+TQ+PQ CV + + ++A TQPRRVAA+S+A RV+ EM +G VGY +
Sbjct: 184 GETGSGKSTQVPQLCVR-AGIANSGSIAVTQPRRVAAISLASRVATEMGTNIGGIVGYHV 242
Query: 144 RFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIK 203
RFE+ + KT ++YMTDG++LR+ + P+L+ Y +++DEAHER+L +D+LM +L++
Sbjct: 243 RFENATCHKTKIEYMTDGIVLRKALVSPLLDKYSCVIIDEAHERSLHSDVLMCILRQCQD 302
Query: 204 QRAD----LKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFY 245
QR + L+L+IMSATL A KFQ YF+NA ++ V GRT P+E+F+
Sbjct: 303 QRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLVAGRTFPIEVFH 348
Score = 53 (23.7 bits), Expect = 7.4e-46, Sum P(2) = 7.4e-46
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 261 FTRPNEAKKAAD-DA-KMRFAHIDGDHLTLLNVYHAFKQRF 299
F+ ++K AD D + RF +GDH+TLL + Q F
Sbjct: 630 FSGAGDSKSDADVDRIRRRFETREGDHITLLKLVLVTNQFF 670
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 487 (176.5 bits), Expect = 9.3e-46, P = 9.3e-46
Identities = 98/196 (50%), Positives = 139/196 (70%)
Query: 53 ELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCV-EYSKSVGAKAVA 111
+L + R LP++ ++ + + + NQ +++GETGSGK+TQIPQ+ + E K +G
Sbjct: 174 QLLQIREKLPIYHHKDKIIEYINNNQVTIVIGETGSGKSTQIPQFLMPENPKMIGV---- 229
Query: 112 CTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDP 171
TQPRRVAA S+A RVSEE C+LGQ+VGY +RF + ++ +T LKY+TDGMLLRE M D
Sbjct: 230 -TQPRRVAAASLAARVSEEYGCKLGQDVGYQVRFTNMTNRQTKLKYLTDGMLLREIMLDS 288
Query: 172 MLENYQVILLDEAHERTLATDILMGVLKEVIK--QRADLKLVIMSATLDAGKFQQYFDNA 229
L Y I+LDEAHERT+ TD++MG LK++I +R DLK+V+MSATL+A F +F NA
Sbjct: 289 NLTKYSTIILDEAHERTILTDLIMGFLKQIITSGKRKDLKIVVMSATLNAELFSNFFGNA 348
Query: 230 PLMNVPGRTHPVEIFY 245
P++ + G+ +PV FY
Sbjct: 349 PILYIEGKMYPVSQFY 364
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 436 (158.5 bits), Expect = 2.1e-45, Sum P(2) = 2.1e-45
Identities = 92/208 (44%), Positives = 141/208 (67%)
Query: 48 TPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCV--EYSKSV 105
T + + +++ +LPVF R + L N ++++ ETGSGKTTQIPQ+ + Y+K+
Sbjct: 55 TSKRTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKN- 113
Query: 106 GAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLR 165
G + TQPRRVAA++VA+RV++E++ +G VGY++RFED +S T ++++TDG+LLR
Sbjct: 114 GM--IGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLR 171
Query: 166 EGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQR-----ADLKLVIMSATLDAG 220
E + D +L Y VI+LDEAHERT+ D+L G++K+ K+R A+LK+V+ SAT+D
Sbjct: 172 ESIKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDID 231
Query: 221 KFQQYFDNAPLMNVPGRTHPVEIFYTPE 248
F YF N M + GRT+PV + +T E
Sbjct: 232 HFGNYF-NCKGMYLEGRTYPVRVMHTKE 258
Score = 67 (28.6 bits), Expect = 2.1e-45, Sum P(2) = 2.1e-45
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAF 295
F +E + A A +F GDHLTLLNV++ F
Sbjct: 526 FVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGF 560
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 478 (173.3 bits), Expect = 4.0e-45, P = 4.0e-45
Identities = 93/201 (46%), Positives = 139/201 (69%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAA 120
LP+ +R + +++ +++ GETGSGK+TQ+P++ E + A+ TQPRRVA
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEAGLAQHG-AIGVTQPRRVAT 59
Query: 121 MSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVIL 180
+SVAQRV+EEM C LG VGY +RF+DCSS +T +KYMTDG LLR ++DP+L Y +I+
Sbjct: 60 ISVAQRVAEEMGCALGSVVGYQVRFDDCSSEETAIKYMTDGCLLRHILADPLLSKYSIII 119
Query: 181 LDEAHERTLATDILMGVLKEVIKQ------RADLKLVIMSATLDAGKFQQYFDNAPLMNV 234
LDEAHER+L+TDIL G+LK++ Q + ++K+V+MSATL+ K ++F + ++++
Sbjct: 120 LDEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMKVVVMSATLEVDKLSEFFGHCSVLHI 179
Query: 235 PGRTHPV-EIFYTPEPPLGAG 254
PGR++PV EIF P G
Sbjct: 180 PGRSYPVKEIFCNLLSPRDTG 200
>UNIPROTKB|J3KSW6 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 Ensembl:ENST00000580030 Uniprot:J3KSW6
Length = 268
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 90/187 (48%), Positives = 130/187 (69%)
Query: 60 TLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVA 119
T P+ + R + + + N +++ G TGSGKTTQ+P++ E S + TQPR+VA
Sbjct: 32 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGM-IGVTQPRKVA 90
Query: 120 AMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVI 179
A+SVAQRV+EEM C LG +VGY +RF+DCSS +T +KYMTDG LL+ + DP L + VI
Sbjct: 91 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVI 150
Query: 180 LLDEAHERTLATDILMGVLKEVIKQRAD-----LKLVIMSATLDAGKFQQYFDNAPLMNV 234
+LDEAHERTL TDIL G+LK++ ++++ LK+V+MSAT++ K +F N P+ ++
Sbjct: 151 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDI 210
Query: 235 PGRTHPV 241
PGR +PV
Sbjct: 211 PGRLYPV 217
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 440 (159.9 bits), Expect = 6.3e-45, Sum P(2) = 6.3e-45
Identities = 90/229 (39%), Positives = 149/229 (65%)
Query: 28 SVSTSIASNLQV--NPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGE 85
S+ + A +L+ N F TP+Y L ++R LPVF++R + L +++ +V+ GE
Sbjct: 534 SLESEKAEDLEPVRNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGE 593
Query: 86 TGSGKTTQIPQWCVE---YSKSVGAKA-VACTQPRRVAAMSVAQRVSEEMDCQLGQE--- 138
TGSGK+TQ+P + +E ++ +K + CTQPRR++A+S+A RV +E+ C+ G
Sbjct: 594 TGSGKSTQVPHFLLEDLLLNEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRN 653
Query: 139 --VGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMG 196
GY IR E +S T L Y T G+LLR+ D +L N +++DE HER++ +D L+
Sbjct: 654 SLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLI 713
Query: 197 VLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFY 245
+LKE++++R+DL L++MSAT+D+ KF YF + P++ + GR++PVE+F+
Sbjct: 714 ILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 75 (31.5 bits), Expect = 6.3e-45, Sum P(2) = 6.3e-45
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
FT P K AD AK A D DHLT+ N Y +K+
Sbjct: 1108 FTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKK 1144
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 440 (159.9 bits), Expect = 6.3e-45, Sum P(2) = 6.3e-45
Identities = 90/229 (39%), Positives = 149/229 (65%)
Query: 28 SVSTSIASNLQV--NPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGE 85
S+ + A +L+ N F TP+Y L ++R LPVF++R + L +++ +V+ GE
Sbjct: 534 SLESEKAEDLEPVRNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGE 593
Query: 86 TGSGKTTQIPQWCVE---YSKSVGAKA-VACTQPRRVAAMSVAQRVSEEMDCQLGQE--- 138
TGSGK+TQ+P + +E ++ +K + CTQPRR++A+S+A RV +E+ C+ G
Sbjct: 594 TGSGKSTQVPHFLLEDLLLNEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKN 653
Query: 139 --VGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMG 196
GY IR E +S T L Y T G+LLR+ D +L N +++DE HER++ +D L+
Sbjct: 654 SLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLI 713
Query: 197 VLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFY 245
+LKE++++R+DL L++MSAT+D+ KF YF + P++ + GR++PVE+F+
Sbjct: 714 ILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 75 (31.5 bits), Expect = 6.3e-45, Sum P(2) = 6.3e-45
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
FT P K AD AK A D DHLT+ N Y +K+
Sbjct: 1111 FTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKK 1147
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 440 (159.9 bits), Expect = 6.3e-45, Sum P(2) = 6.3e-45
Identities = 90/229 (39%), Positives = 149/229 (65%)
Query: 28 SVSTSIASNLQV--NPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGE 85
S+ + A +L+ N F TP+Y L ++R LPVF++R + L +++ +V+ GE
Sbjct: 534 SLESEKAEDLEPVRNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGE 593
Query: 86 TGSGKTTQIPQWCVE---YSKSVGAKA-VACTQPRRVAAMSVAQRVSEEMDCQLGQE--- 138
TGSGK+TQ+P + +E ++ +K + CTQPRR++A+S+A RV +E+ C+ G
Sbjct: 594 TGSGKSTQVPHFLLEDLLLNEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRN 653
Query: 139 --VGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMG 196
GY IR E +S T L Y T G+LLR+ D +L N +++DE HER++ +D L+
Sbjct: 654 SLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLI 713
Query: 197 VLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFY 245
+LKE++++R+DL L++MSAT+D+ KF YF + P++ + GR++PVE+F+
Sbjct: 714 ILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 75 (31.5 bits), Expect = 6.3e-45, Sum P(2) = 6.3e-45
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
FT P K AD AK A D DHLT+ N Y +K+
Sbjct: 1111 FTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKK 1147
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 440 (159.9 bits), Expect = 6.4e-45, Sum P(2) = 6.4e-45
Identities = 90/229 (39%), Positives = 149/229 (65%)
Query: 28 SVSTSIASNLQV--NPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGE 85
S+ + A +L+ N F TP+Y L ++R LPVF++R + L +++ +V+ GE
Sbjct: 534 SLESEKAEDLEPVRNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGE 593
Query: 86 TGSGKTTQIPQWCVE---YSKSVGAKA-VACTQPRRVAAMSVAQRVSEEMDCQLGQE--- 138
TGSGK+TQ+P + +E ++ +K + CTQPRR++A+S+A RV +E+ C+ G
Sbjct: 594 TGSGKSTQVPHFLLEDLLLNEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKN 653
Query: 139 --VGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMG 196
GY IR E +S T L Y T G+LLR+ D +L N +++DE HER++ +D L+
Sbjct: 654 SLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLI 713
Query: 197 VLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFY 245
+LKE++++R+DL L++MSAT+D+ KF YF + P++ + GR++PVE+F+
Sbjct: 714 ILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 75 (31.5 bits), Expect = 6.4e-45, Sum P(2) = 6.4e-45
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
FT P K AD AK A D DHLT+ N Y +K+
Sbjct: 1111 FTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKK 1147
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 440 (159.9 bits), Expect = 6.4e-45, Sum P(2) = 6.4e-45
Identities = 90/229 (39%), Positives = 149/229 (65%)
Query: 28 SVSTSIASNLQV--NPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGE 85
S+ + A +L+ N F TP+Y L ++R LPVF++R + L +++ +V+ GE
Sbjct: 534 SLESEKAEDLEPVRNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGE 593
Query: 86 TGSGKTTQIPQWCVE---YSKSVGAKA-VACTQPRRVAAMSVAQRVSEEMDCQLGQE--- 138
TGSGK+TQ+P + +E ++ +K + CTQPRR++A+S+A RV +E+ C+ G
Sbjct: 594 TGSGKSTQVPHFLLEDLLLNEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKN 653
Query: 139 --VGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMG 196
GY IR E +S T L Y T G+LLR+ D +L N +++DE HER++ +D L+
Sbjct: 654 SLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLI 713
Query: 197 VLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFY 245
+LKE++++R+DL L++MSAT+D+ KF YF + P++ + GR++PVE+F+
Sbjct: 714 ILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 75 (31.5 bits), Expect = 6.4e-45, Sum P(2) = 6.4e-45
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
FT P K AD AK A D DHLT+ N Y +K+
Sbjct: 1111 FTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKK 1147
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 446 (162.1 bits), Expect = 7.9e-45, Sum P(2) = 7.9e-45
Identities = 88/215 (40%), Positives = 141/215 (65%)
Query: 40 NPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCV 99
N F TP+Y L ++R LPVF++R + L +++ +V+ GETGSGK+TQ+P + +
Sbjct: 551 NLFRRLQSTPKYQRLLKERQQLPVFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLL 610
Query: 100 E--YSKSVGAKA--VACTQPRRVAAMSVAQRVSEEMDCQLGQE-----VGYSIRFEDCSS 150
E GA+ + CTQPRR++A+S+A RV EE+ C+ G GY IR E +S
Sbjct: 611 EDLLLNDCGARKCNIVCTQPRRISAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRAS 670
Query: 151 PKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKL 210
T L Y T G+LLR+ D +L + +++DE HER++ +D L+ +LKE++++R+DL L
Sbjct: 671 ESTRLLYCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHL 730
Query: 211 VIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFY 245
++MSAT+D+ KF YF + P++ + GR++PVE+F+
Sbjct: 731 ILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFH 765
Score = 68 (29.0 bits), Expect = 7.9e-45, Sum P(2) = 7.9e-45
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
F P K AD AK A D DHLT+ N Y +K+
Sbjct: 1111 FITPIGRKDEADLAKSSLAVADSDHLTIYNAYLGWKK 1147
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 397 (144.8 bits), Expect = 8.3e-45, Sum P(3) = 8.3e-45
Identities = 83/165 (50%), Positives = 111/165 (67%)
Query: 96 QWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSP-KTV 154
++ E + + V TQPRRVAA++VA RV+EE LG EVGY IRF+DC+ T
Sbjct: 58 KYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATR 117
Query: 155 LKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMS 214
+K++TDGML+RE M DP+L Y VI+LDEAHERTL TDI +G+LK++ K+R DL+L++ S
Sbjct: 118 IKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVAS 177
Query: 215 ATLDAGKFQQYF----------DNAPLMNVPGRTHPVEIFYTPEP 249
ATLDA KF+ +F D ++ V GRT PV+IFY P
Sbjct: 178 ATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSP 222
Score = 76 (31.8 bits), Expect = 8.3e-45, Sum P(3) = 8.3e-45
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAF 295
F P K A +FA +GDHLT+LN+Y AF
Sbjct: 490 FVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAF 524
Score = 43 (20.2 bits), Expect = 8.3e-45, Sum P(3) = 8.3e-45
Identities = 19/52 (36%), Positives = 23/52 (44%)
Query: 21 RLATVNASVSTSIA-SNLQVNPFTGYPYTPRYHEL--HRKRITLPVFEYRTE 69
R T VS S +L N T Y P Y L ++R LPVF+Y E
Sbjct: 12 RPGTEGPGVSISEERQSLAENSGTTVVYNP-YAALSIEQQRQKLPVFKYLAE 62
Score = 39 (18.8 bits), Expect = 6.0e-41, Sum P(3) = 6.0e-41
Identities = 5/12 (41%), Positives = 7/12 (58%)
Query: 239 HPVEIFYTPEPP 250
HP + Y +PP
Sbjct: 608 HPASVLYAEKPP 619
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 461 (167.3 bits), Expect = 9.7e-45, Sum P(2) = 9.7e-45
Identities = 88/199 (44%), Positives = 130/199 (65%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
R +L R+R LP+ +Y + L ++Q +V+ G+TG GK+TQ+PQ Y + G
Sbjct: 153 RLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQ----YLLAAGFSH 208
Query: 110 VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS 169
VACTQPRR+A +S+A+RV E Q G +VGY IRFE S T + ++T G+LLR+
Sbjct: 209 VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQR 268
Query: 170 DPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNA 229
+P L YQV+++DE HER L D L+GVL+ ++ QR DLK+++MSAT++ F YF +A
Sbjct: 269 EPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYFSHA 328
Query: 230 PLMNVPGRTHPVEIFYTPE 248
P++ VPGR P+ + Y P+
Sbjct: 329 PVVQVPGRLFPITVVYQPQ 347
Score = 49 (22.3 bits), Expect = 9.7e-45, Sum P(2) = 9.7e-45
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 243 IFYTPEPPL--GAGPWLPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
+F EP L A + FTR ++ A+ GD TL NV++A+ Q
Sbjct: 600 MFSLAEPVLTIAAALSVQSPFTRSAQSNLDCATARRPLESDQGDPFTLFNVFNAWVQ 656
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 349 (127.9 bits), Expect = 1.1e-44, Sum P(3) = 1.1e-44
Identities = 64/147 (43%), Positives = 105/147 (71%)
Query: 100 EYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDC-QLGQEVGYSIRFEDCSSPKTVLKYM 158
E K K + + PRRVA ++VA+RVS+EM +G VGY+IRF++ S KT +K++
Sbjct: 62 EKKKRKEKKKMLISLPRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFV 121
Query: 159 TDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLD 218
TDG+L+RE M+DP+L+ Y+ ++LDE HER++ TD+L+G K ++++R +K+++MSAT D
Sbjct: 122 TDGILIREIMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFD 181
Query: 219 AGKFQQYFDNAPLMNVPGRTHPVEIFY 245
F Q+F+N P++ +P + H + I+Y
Sbjct: 182 INIFNQFFNNPPIITIPHKLHKITIYY 208
Score = 105 (42.0 bits), Expect = 1.1e-44, Sum P(3) = 1.1e-44
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQ 96
LP+ +Y+ E L+ +N I++ GETG GKTTQ+PQ
Sbjct: 4 LPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQ 39
Score = 74 (31.1 bits), Expect = 1.1e-44, Sum P(3) = 1.1e-44
Identities = 12/33 (36%), Positives = 23/33 (69%)
Query: 265 NEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
N+ K + A+ + H DGDHLTLL++++ +++
Sbjct: 695 NDKNKLINVARRKLIHPDGDHLTLLHIFYLWQE 727
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 349 (127.9 bits), Expect = 1.1e-44, Sum P(3) = 1.1e-44
Identities = 64/147 (43%), Positives = 105/147 (71%)
Query: 100 EYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDC-QLGQEVGYSIRFEDCSSPKTVLKYM 158
E K K + + PRRVA ++VA+RVS+EM +G VGY+IRF++ S KT +K++
Sbjct: 62 EKKKRKEKKKMLISLPRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFV 121
Query: 159 TDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLD 218
TDG+L+RE M+DP+L+ Y+ ++LDE HER++ TD+L+G K ++++R +K+++MSAT D
Sbjct: 122 TDGILIREIMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFD 181
Query: 219 AGKFQQYFDNAPLMNVPGRTHPVEIFY 245
F Q+F+N P++ +P + H + I+Y
Sbjct: 182 INIFNQFFNNPPIITIPHKLHKITIYY 208
Score = 105 (42.0 bits), Expect = 1.1e-44, Sum P(3) = 1.1e-44
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQ 96
LP+ +Y+ E L+ +N I++ GETG GKTTQ+PQ
Sbjct: 4 LPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQ 39
Score = 74 (31.1 bits), Expect = 1.1e-44, Sum P(3) = 1.1e-44
Identities = 12/33 (36%), Positives = 23/33 (69%)
Query: 265 NEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
N+ K + A+ + H DGDHLTLL++++ +++
Sbjct: 695 NDKNKLINVARRKLIHPDGDHLTLLHIFYLWQE 727
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 438 (159.2 bits), Expect = 1.3e-44, Sum P(2) = 1.3e-44
Identities = 85/202 (42%), Positives = 138/202 (68%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACT 113
L +R LP+ +YR + + L ++Q ++LVGETGSGK+TQ+PQ+ E+ + T
Sbjct: 40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKG-LIGIT 98
Query: 114 QPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPML 173
+PRRV+ +++A RV++E +G VGY +RF + S T +K+MT+G+LLRE ++DP+L
Sbjct: 99 EPRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPLL 158
Query: 174 ENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYF------D 227
Y VI++DEAHER + TD+++G+LK+++++R+ LKL+I SAT+DA F ++F +
Sbjct: 159 TQYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGE 218
Query: 228 NAPLMNVPGRTHPVEIFYTPEP 249
+ +++ GR HPV FY EP
Sbjct: 219 VSVKLSIEGRMHPVSNFYLNEP 240
Score = 56 (24.8 bits), Expect = 1.3e-44, Sum P(2) = 1.3e-44
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 261 FTRPNEA--KKAADDAKMRFAHIDGDHLTLLNVYHAF 295
F+RP A +++ A +F +GD +T+LN Y F
Sbjct: 504 FSRPASAVAQQSGRIAHRKFEVAEGDFITMLNAYTGF 540
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 444 (161.4 bits), Expect = 1.3e-44, Sum P(2) = 1.3e-44
Identities = 86/207 (41%), Positives = 139/207 (67%)
Query: 48 TPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSV 105
TP+Y L ++R LPVF++R + L +++ +V+ GETGSGK+TQ+P + +E
Sbjct: 558 TPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLDEC 617
Query: 106 GAKA--VACTQPRRVAAMSVAQRVSEEMDCQLGQE-----VGYSIRFEDCSSPKTVLKYM 158
GA+ + CTQPRR++A+S+A RV EE+ C+ G GY IR E +S T L Y
Sbjct: 618 GARKCNIVCTQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRLLYC 677
Query: 159 TDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLD 218
T G+LLR+ D +L + +++DE HER++ +D L+ +LKE++++R+DL L++MSAT+D
Sbjct: 678 TTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVD 737
Query: 219 AGKFQQYFDNAPLMNVPGRTHPVEIFY 245
+ KF YF + P++ + GR++PVE+F+
Sbjct: 738 SDKFSTYFTHCPILRISGRSYPVEVFH 764
Score = 68 (29.0 bits), Expect = 1.3e-44, Sum P(2) = 1.3e-44
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
F P K AD AK A D DHLT+ N Y +K+
Sbjct: 1110 FITPIGRKDEADLAKSSLAVADSDHLTIYNAYLGWKK 1146
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 464 (168.4 bits), Expect = 1.7e-44, Sum P(2) = 1.7e-44
Identities = 88/191 (46%), Positives = 136/191 (71%)
Query: 56 RKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQP 115
RKR LP++ YR + + + N+ ++LVGETGSGK+TQ+ Q+ E + + CTQP
Sbjct: 435 RKR--LPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNII-CTQP 491
Query: 116 RRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLEN 175
RR+A +++A RV+EEM+ ++G+EVGY IRF++ +S T + YMTDGM LR + +P LE+
Sbjct: 492 RRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLED 551
Query: 176 YQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVP 235
V+++DEAHER L TD+++ ++K++ R ++++VI SATLDA K YF+ AP+ VP
Sbjct: 552 ISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYFNCAPIFYVP 611
Query: 236 GRTHPVEIFYT 246
GR + V+I+YT
Sbjct: 612 GRKYNVDIYYT 622
Score = 44 (20.5 bits), Expect = 1.7e-44, Sum P(2) = 1.7e-44
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVY 292
+ + + K+A + KM GD L LN+Y
Sbjct: 990 YVQKGKEKEAENIKKMFIIEGGGDFLLFLNIY 1021
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 464 (168.4 bits), Expect = 1.7e-44, Sum P(2) = 1.7e-44
Identities = 88/191 (46%), Positives = 136/191 (71%)
Query: 56 RKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQP 115
RKR LP++ YR + + + N+ ++LVGETGSGK+TQ+ Q+ E + + CTQP
Sbjct: 435 RKR--LPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNII-CTQP 491
Query: 116 RRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLEN 175
RR+A +++A RV+EEM+ ++G+EVGY IRF++ +S T + YMTDGM LR + +P LE+
Sbjct: 492 RRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLED 551
Query: 176 YQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVP 235
V+++DEAHER L TD+++ ++K++ R ++++VI SATLDA K YF+ AP+ VP
Sbjct: 552 ISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYFNCAPIFYVP 611
Query: 236 GRTHPVEIFYT 246
GR + V+I+YT
Sbjct: 612 GRKYNVDIYYT 622
Score = 44 (20.5 bits), Expect = 1.7e-44, Sum P(2) = 1.7e-44
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVY 292
+ + + K+A + KM GD L LN+Y
Sbjct: 990 YVQKGKEKEAENIKKMFIIEGGGDFLLFLNIY 1021
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 458 (166.3 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 94/222 (42%), Positives = 137/222 (61%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
R +L R+R LP+ +Y + L ++Q +V+ G+TG GK+TQ+PQ Y + G
Sbjct: 151 RLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQ----YLLAAGFSH 206
Query: 110 VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS 169
VACTQPRR+A +S+A+RV E Q G +VGY IRFE S T + ++T G+LLR+
Sbjct: 207 VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQR 266
Query: 170 DPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNA 229
+P L Y+V+++DE HER L D L+GVL+ ++ R DLK+++MSAT++ F YF NA
Sbjct: 267 EPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNA 326
Query: 230 PLMNVPGRTHPVEIFYTP---EPPLGAGPWL-PQCFTRPNEA 267
P++ VPGR P+ + Y P EP L P+ F R E+
Sbjct: 327 PVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLES 368
Score = 49 (22.3 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
FTR ++ A+ GD TL NV++A+ Q
Sbjct: 618 FTRSAQSSPECAAARRPLESDQGDPFTLFNVFNAWVQ 654
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 473 (171.6 bits), Expect = 2.3e-44, P = 2.3e-44
Identities = 90/187 (48%), Positives = 130/187 (69%)
Query: 60 TLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVA 119
T P+ + R + + + N +++ G TGSGKTTQ+P++ E S + TQPR+VA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGM-IGVTQPRKVA 110
Query: 120 AMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVI 179
A+SVAQRV+EEM C LG +VGY +RF+DCSS +T +KYMTDG LL+ + DP L + VI
Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVI 170
Query: 180 LLDEAHERTLATDILMGVLKEVIKQRAD-----LKLVIMSATLDAGKFQQYFDNAPLMNV 234
+LDEAHERTL TDIL G+LK++ ++++ LK+V+MSAT++ K +F N P+ ++
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDI 230
Query: 235 PGRTHPV 241
PGR +PV
Sbjct: 231 PGRLYPV 237
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 473 (171.6 bits), Expect = 2.3e-44, P = 2.3e-44
Identities = 90/187 (48%), Positives = 130/187 (69%)
Query: 60 TLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVA 119
T P+ + R + + + N +++ G TGSGKTTQ+P++ E S + TQPR+VA
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGM-IGVTQPRKVA 110
Query: 120 AMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVI 179
A+SVAQRV+EEM C LG +VGY +RF+DCSS +T +KYMTDG LL+ + DP L + VI
Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVI 170
Query: 180 LLDEAHERTLATDILMGVLKEVIKQRAD-----LKLVIMSATLDAGKFQQYFDNAPLMNV 234
+LDEAHERTL TDIL G+LK++ ++++ LK+V+MSAT++ K +F N P+ ++
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDI 230
Query: 235 PGRTHPV 241
PGR +PV
Sbjct: 231 PGRLYPV 237
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 473 (171.6 bits), Expect = 2.3e-44, P = 2.3e-44
Identities = 90/187 (48%), Positives = 130/187 (69%)
Query: 60 TLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVA 119
T P+ + R + + + N +++ G TGSGKTTQ+P++ E S + TQPR+VA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGM-IGVTQPRKVA 110
Query: 120 AMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVI 179
A+SVAQRV+EEM C LG +VGY +RF+DCSS +T +KYMTDG LL+ + DP L + VI
Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVI 170
Query: 180 LLDEAHERTLATDILMGVLKEVIKQRAD-----LKLVIMSATLDAGKFQQYFDNAPLMNV 234
+LDEAHERTL TDIL G+LK++ ++++ LK+V+MSAT++ K +F N P+ ++
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDI 230
Query: 235 PGRTHPV 241
PGR +PV
Sbjct: 231 PGRLYPV 237
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 473 (171.6 bits), Expect = 2.3e-44, P = 2.3e-44
Identities = 90/187 (48%), Positives = 130/187 (69%)
Query: 60 TLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVA 119
T P+ + R + + + N +++ G TGSGKTTQ+P++ E S + TQPR+VA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGM-IGVTQPRKVA 110
Query: 120 AMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVI 179
A+SVAQRV+EEM C LG +VGY +RF+DCSS +T +KYMTDG LL+ + DP L + VI
Sbjct: 111 AISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVI 170
Query: 180 LLDEAHERTLATDILMGVLKEVIKQRAD-----LKLVIMSATLDAGKFQQYFDNAPLMNV 234
+LDEAHERTL TDIL G+LK++ ++++ LK+V+MSAT++ K +F N P+ ++
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDI 230
Query: 235 PGRTHPV 241
PGR +PV
Sbjct: 231 PGRLYPV 237
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 465 (168.7 bits), Expect = 2.5e-44, Sum P(2) = 2.5e-44
Identities = 89/198 (44%), Positives = 135/198 (68%)
Query: 53 ELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVAC 112
+L R++ +LP+F+YR + + L+ + +V+ G+TG GK+TQ+PQ Y + G +AC
Sbjct: 154 KLRREQKSLPIFQYRDKIVELVRTHPVVVVAGDTGCGKSTQVPQ----YLLASGINNIAC 209
Query: 113 TQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPM 172
TQPRR+A +S+A+RVS E Q G +VGY IRFE + T L ++T+G+LLR+ D
Sbjct: 210 TQPRRIACISLAKRVSFESLNQYGSKVGYQIRFETSRTLATKLLFLTEGLLLRQIQQDAS 269
Query: 173 LENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLM 232
L YQV+++DE HER L D L+GVL+ ++ R DL+LV+MSAT++ F YF++AP++
Sbjct: 270 LGQYQVLIVDEVHERHLHCDFLLGVLRSLLSLRPDLRLVLMSATINIKLFSSYFNDAPVL 329
Query: 233 NVPGRTHPVEIFYTPEPP 250
VPGR P+++ Y P PP
Sbjct: 330 QVPGRLFPIQVIYQPIPP 347
Score = 41 (19.5 bits), Expect = 2.5e-44, Sum P(2) = 2.5e-44
Identities = 15/57 (26%), Positives = 23/57 (40%)
Query: 243 IFYTPEPPL--GAGPWLPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
+F EP L A + F R + A+ GD TL+N ++A+ Q
Sbjct: 598 VFNLVEPVLTVAAALSVQSPFLRSAQHNPDCSTARQPLNSNHGDPFTLMNTFNAWVQ 654
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 452 (164.2 bits), Expect = 2.6e-44, Sum P(2) = 2.6e-44
Identities = 86/199 (43%), Positives = 129/199 (64%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
R +L +R LP+ +Y + L ++Q +V+ G+TG GK+TQ+PQ Y + G
Sbjct: 150 RLAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQ----YLLAAGFSH 205
Query: 110 VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS 169
VACTQPRR+A +S+A+RVS E Q G +VGY IRFE + T + ++T G+LLR+
Sbjct: 206 VACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQR 265
Query: 170 DPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNA 229
+P L YQV+++DE HER L D L+GVL+ ++ +R DLK+++MSAT++ F YF A
Sbjct: 266 EPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSYFGTA 325
Query: 230 PLMNVPGRTHPVEIFYTPE 248
P++ VPGR P+ + Y P+
Sbjct: 326 PVVQVPGRLFPITVVYQPQ 344
Score = 54 (24.1 bits), Expect = 2.6e-44, Sum P(2) = 2.6e-44
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 243 IFYTPEPPL--GAGPWLPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
+F+ EP L A + FTR ++ A+ GD TL NV++A+ Q
Sbjct: 597 MFHLAEPVLTIAAALSVQSPFTRSAQSNPECAAARRPLESDQGDPFTLFNVFNAWVQ 653
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 458 (166.3 bits), Expect = 2.7e-44, Sum P(2) = 2.7e-44
Identities = 85/187 (45%), Positives = 130/187 (69%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAA 120
LPV + + + + + +Q +++ GETGSGKTTQ+P+ C+E + + + TQPRR+AA
Sbjct: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLAA 135
Query: 121 MSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVIL 180
+VA R++EE+ + G +GY +RF D S T++K MTDG+LL E D +L Y I+
Sbjct: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195
Query: 181 LDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHP 240
+DEAHER+L D L+G LKE++ +R DLK++I SAT+D +F ++F+NAP++ V GRT+P
Sbjct: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255
Query: 241 VEIFYTP 247
VE+ Y P
Sbjct: 256 VEVRYRP 262
Score = 50 (22.7 bits), Expect = 2.7e-44, Sum P(2) = 2.7e-44
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 263 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYH 293
RP + ++A+D+ RF + D L +N+++
Sbjct: 533 RPMDKQQASDEKHRRFHDKESDFLAFVNLWN 563
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 472 (171.2 bits), Expect = 3.0e-44, P = 3.0e-44
Identities = 90/187 (48%), Positives = 129/187 (68%)
Query: 60 TLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVA 119
T P+ + R + + + N +++ G TGSGKTTQ+P++ E S + TQPR+VA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGM-IGVTQPRKVA 110
Query: 120 AMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVI 179
A+SVAQRV+EEM C LG +VGY +RF+DCSS +T +KYMTDG LL+ + DP L + VI
Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVI 170
Query: 180 LLDEAHERTLATDILMGVLKEVIKQRAD-----LKLVIMSATLDAGKFQQYFDNAPLMNV 234
+LDEAHERTL TDIL G+LK++ + ++ LK+V+MSAT++ K +F N P+ ++
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDI 230
Query: 235 PGRTHPV 241
PGR +PV
Sbjct: 231 PGRLYPV 237
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 472 (171.2 bits), Expect = 3.0e-44, P = 3.0e-44
Identities = 90/187 (48%), Positives = 129/187 (68%)
Query: 60 TLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVA 119
T P+ + R + + + N +++ G TGSGKTTQ+P++ E S + TQPR+VA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGM-IGVTQPRKVA 110
Query: 120 AMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVI 179
A+SVAQRV+EEM C LG +VGY +RF+DCSS +T +KYMTDG LL+ + DP L + VI
Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVI 170
Query: 180 LLDEAHERTLATDILMGVLKEVIKQRAD-----LKLVIMSATLDAGKFQQYFDNAPLMNV 234
+LDEAHERTL TDIL G+LK++ + ++ LK+V+MSAT++ K +F N P+ ++
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDI 230
Query: 235 PGRTHPV 241
PGR +PV
Sbjct: 231 PGRLYPV 237
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 452 (164.2 bits), Expect = 3.0e-44, Sum P(2) = 3.0e-44
Identities = 86/199 (43%), Positives = 129/199 (64%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
R +L +R LP+ +Y + L ++Q +V+ G+TG GK+TQ+PQ Y + G
Sbjct: 155 RLAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQ----YLLAAGFSH 210
Query: 110 VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS 169
VACTQPRR+A +S+A+RVS E Q G +VGY IRFE + T + ++T G+LLR+
Sbjct: 211 VACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQR 270
Query: 170 DPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNA 229
+P L YQV+++DE HER L D L+GVL+ ++ +R DLK+++MSAT++ F YF A
Sbjct: 271 EPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSYFGTA 330
Query: 230 PLMNVPGRTHPVEIFYTPE 248
P++ VPGR P+ + Y P+
Sbjct: 331 PVVQVPGRLFPITVVYQPQ 349
Score = 54 (24.1 bits), Expect = 3.0e-44, Sum P(2) = 3.0e-44
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 243 IFYTPEPPL--GAGPWLPQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
+F+ EP L A + FTR ++ A+ GD TL NV++A+ Q
Sbjct: 602 MFHLAEPVLTIAAALSVQSPFTRSAQSNPECAAARRPLESDQGDPFTLFNVFNAWVQ 658
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 473 (171.6 bits), Expect = 3.6e-44, P = 3.6e-44
Identities = 90/187 (48%), Positives = 130/187 (69%)
Query: 60 TLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVA 119
T P+ + R + + + N +++ G TGSGKTTQ+P++ E S + TQPR+VA
Sbjct: 130 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGM-IGVTQPRKVA 188
Query: 120 AMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVI 179
A+SVAQRV+EEM C LG +VGY +RF+DCSS +T +KYMTDG LL+ + DP L + VI
Sbjct: 189 AISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVI 248
Query: 180 LLDEAHERTLATDILMGVLKEVIKQRAD-----LKLVIMSATLDAGKFQQYFDNAPLMNV 234
+LDEAHERTL TDIL G+LK++ ++++ LK+V+MSAT++ K +F N P+ ++
Sbjct: 249 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDI 308
Query: 235 PGRTHPV 241
PGR +PV
Sbjct: 309 PGRLYPV 315
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 437 (158.9 bits), Expect = 5.6e-44, Sum P(2) = 5.6e-44
Identities = 87/215 (40%), Positives = 141/215 (65%)
Query: 40 NPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCV 99
N F TP+Y L ++R LPVF++R+ + L +++ +V+ GETGSGK+TQ+P + +
Sbjct: 548 NLFRKLQSTPKYQRLLKERQQLPVFKHRSSVVETLKRHRVVVVAGETGSGKSTQVPHFLL 607
Query: 100 E---YSKSVGAKA-VACTQPRRVAAMSVAQRVSEEMDCQLGQE-----VGYSIRFEDCSS 150
E ++ K + CTQPRR++A+S+A RV +E+ C+ G GY IR E +S
Sbjct: 608 EDLLLNEWGTTKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRAS 667
Query: 151 PKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKL 210
T L Y T G+LLR+ D +L N +++DE HER++ +D L+ +LKE++++R+DL L
Sbjct: 668 ESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHL 727
Query: 211 VIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFY 245
++MSAT+D KF YF + P++ + GR++PVE+F+
Sbjct: 728 ILMSATVDCEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 69 (29.3 bits), Expect = 5.6e-44, Sum P(2) = 5.6e-44
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
F P K AD AK A D DHLT+ N Y +K+
Sbjct: 1108 FITPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKK 1144
>UNIPROTKB|Q8TE96 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
EMBL:AC005041 HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AK074337 EMBL:AK092420 EMBL:BC075018
IPI:IPI00385794 IPI:IPI00843897 IPI:IPI00844595 RefSeq:NP_598376.2
UniGene:Hs.191705 ProteinModelPortal:Q8TE96 SMR:Q8TE96
STRING:Q8TE96 PhosphoSite:Q8TE96 DMDM:145558898 PaxDb:Q8TE96
PRIDE:Q8TE96 Ensembl:ENST00000393951 Ensembl:ENST00000404568
GeneID:165545 KEGG:hsa:165545 UCSC:uc010yrw.2 GeneCards:GC02M074745
H-InvDB:HIX0200286 HGNC:HGNC:20410 HPA:HPA039158 neXtProt:NX_Q8TE96
PharmGKB:PA134916600 InParanoid:Q8TE96 GenomeRNAi:165545
NextBio:88548 ArrayExpress:Q8TE96 Bgee:Q8TE96 CleanEx:HS_DQX1
Genevestigator:Q8TE96 Uniprot:Q8TE96
Length = 717
Score = 415 (151.1 bits), Expect = 6.8e-44, Sum P(2) = 6.8e-44
Identities = 92/224 (41%), Positives = 141/224 (62%)
Query: 35 SNLQVNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQC-IVLV-GETGSGKTT 92
S L VNPF G P++ RY+EL ++R LP++ R F+ L N +VLV GE GSGK+T
Sbjct: 19 SELAVNPFDGLPFSSRYYELLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKST 78
Query: 93 QIPQWCVEYSKSVGAKA--VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSS 150
QIPQWC E++ + G + V TQP +AA S+A RV++EMD LG EVGYSI EDC+
Sbjct: 79 QIPQWCAEFALARGFQKGQVTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTG 138
Query: 151 PKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQR--ADL 208
P T+L++ D +LL+E S + V++LDEA ER++A+D L G+L++ ++ DL
Sbjct: 139 PNTLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDL 198
Query: 209 KLVIMSATLDAGKFQQYFDNAPLMNVPGRT--HPVEIFYTPEPP 250
++V+++ K + ++ N P++++P P I++ PP
Sbjct: 199 RVVVVTDPALEPKLRAFWGNPPIVHIPREPGERPSPIYWDTIPP 242
Score = 77 (32.2 bits), Expect = 6.8e-44, Sum P(2) = 6.8e-44
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 261 FTRPNEAKKAADDAKMRFA--HIDGDHLTLLNVYHAFKQ 297
FTRP +A++A +R A H DGDH +L+ VY AF Q
Sbjct: 503 FTRP---PLSAEEAALRRALEHTDGDHSSLIQVYEAFIQ 538
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 446 (162.1 bits), Expect = 1.9e-43, Sum P(2) = 1.9e-43
Identities = 87/192 (45%), Positives = 129/192 (67%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAA 120
LP+ E + + NQ +++ GETGSGKTTQIP+ C+E + V + TQPRR+AA
Sbjct: 99 LPISENAAQISAAIDANQVVIIAGETGSGKTTQIPKICLELGRGVDG-LIGHTQPRRIAA 157
Query: 121 MSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVIL 180
+VA R++EE+ +LG++VGY +RF D S ++ +K MTDG+LL E D +L Y I+
Sbjct: 158 RTVANRIAEELGTKLGEQVGYKVRFNDQVSEQSYIKLMTDGILLAEMQRDRLLLKYDTII 217
Query: 181 LDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDN-----APLMNVP 235
+DEAHER+L D ++G LK+++ +R DLKL+I SAT+D +F ++F + AP++ V
Sbjct: 218 IDEAHERSLNIDFILGYLKQILIKRPDLKLIITSATIDPQRFAKHFSSKNGLPAPIIEVS 277
Query: 236 GRTHPVEIFYTP 247
GRT PVE+ Y P
Sbjct: 278 GRTFPVEMRYRP 289
Score = 55 (24.4 bits), Expect = 1.9e-43, Sum P(2) = 1.9e-43
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 263 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQR 298
RP+E ++ +D+ RF D ++LLN++ ++
Sbjct: 577 RPHEKQQLSDEKHNRFKDKSSDFISLLNLWQYINEQ 612
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 89/196 (45%), Positives = 133/196 (67%)
Query: 56 RKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQP 115
+K++ LP+ +YR + + + QNQ +++G TG GKTTQIPQ+ E + + CTQP
Sbjct: 21 QKKL-LPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQP 79
Query: 116 RRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLEN 175
RR+ A SV++RVS E++ G GYSI+F+ S KT +KYMTDG+LL E DP+LE
Sbjct: 80 RRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLER 139
Query: 176 YQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYF--DNAPLMN 233
Y +++LDE HERTL+TD+L+GVLK ++++R D +LV+ SA++DA K Q+F D M+
Sbjct: 140 YSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCTMS 199
Query: 234 VPGRTHPVEIFYTPEP 249
+ G+ PVE + +P
Sbjct: 200 IEGKLFPVETLFLQKP 215
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 434 (157.8 bits), Expect = 3.1e-43, Sum P(2) = 3.1e-43
Identities = 89/233 (38%), Positives = 146/233 (62%)
Query: 26 NASVSTSIASNLQV--NPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLV 83
N S+ T+ NL+ N F + RY + ++R LPVF++R + L +++ +V+
Sbjct: 537 NLSLETADTDNLEPSRNLFRKLQSSSRYQKFLKERQELPVFKHRHSIVETLKKHRVVVVA 596
Query: 84 GETGSGKTTQIPQWCVE-YSKSVGAKA--VACTQPRRVAAMSVAQRVSEEMDCQLGQE-- 138
GETGSGK+TQ+P + +E G + + CTQPRR++A+S+A RV EE+ C+ G
Sbjct: 597 GETGSGKSTQVPHFLLEDLLLDEGTRKCNIVCTQPRRISAVSLATRVCEELGCESGPGGK 656
Query: 139 ---VGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILM 195
GY IR E + T L Y T G+LLR+ D +L + +++DE HER++ +D L+
Sbjct: 657 NSLCGYQIRMESRTGEATRLLYCTTGVLLRKLQEDGLLSSISHVIVDEVHERSVHSDFLL 716
Query: 196 GVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPE 248
+LKE++ +R+DL L++MSAT+D+ KF YF + P++ + GR++PVE+F+ +
Sbjct: 717 VILKEILHKRSDLHLILMSATVDSEKFSSYFAHCPILRISGRSYPVEVFHVED 769
Score = 65 (27.9 bits), Expect = 3.1e-43, Sum P(2) = 3.1e-43
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
FT P K AD AK A DHLT+ N Y +K+
Sbjct: 1113 FTTPIGRKDEADLAKSSIALAVSDHLTIYNAYLGWKK 1149
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 438 (159.2 bits), Expect = 4.6e-43, Sum P(2) = 4.6e-43
Identities = 96/240 (40%), Positives = 147/240 (61%)
Query: 10 DPYITKKNREERLATVNASVSTSIASNLQV-NPFTGYPYTPRYHELHRKRITLPVFEYRT 68
+ Y+ K R R + + A N ++ F + ++H + ++R LP +E R
Sbjct: 445 ESYVNLKKRSYRRC--DRPAKSLFAENSKICRQFQMKQASRQFHAILQERQLLPAWEERE 502
Query: 69 EFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVA---CTQPRRVAAMSVAQ 125
+ LL+++Q +V+ G TG GKTTQIPQ+ ++ S + + VA CTQPRR++A+SVA+
Sbjct: 503 TILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANIICTQPRRISAISVAE 562
Query: 126 RVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAH 185
RV++E ++G VGY IR E S T L Y T G+LLR D L+ I++DE H
Sbjct: 563 RVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDATLQGVTHIIVDEVH 622
Query: 186 ERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFY 245
ERT +D L+ VLK+++ QRA L++++MSATLDAG F +YF P++ +PGR PV+ F+
Sbjct: 623 ERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFF 682
Score = 59 (25.8 bits), Expect = 4.6e-43, Sum P(2) = 4.6e-43
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
F P + K+ A+ K+ FA + D+L LL Y ++
Sbjct: 1049 FVSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQ 1084
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 438 (159.2 bits), Expect = 5.3e-43, Sum P(2) = 5.3e-43
Identities = 96/240 (40%), Positives = 147/240 (61%)
Query: 10 DPYITKKNREERLATVNASVSTSIASNLQV-NPFTGYPYTPRYHELHRKRITLPVFEYRT 68
+ Y+ K R R + + A N ++ F + ++H + ++R LP +E R
Sbjct: 498 ESYVNLKKRSYRRC--DRPAKSLFAENSKICRQFQMKQASRQFHAILQERQLLPAWEERE 555
Query: 69 EFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVA---CTQPRRVAAMSVAQ 125
+ LL+++Q +V+ G TG GKTTQIPQ+ ++ S + + VA CTQPRR++A+SVA+
Sbjct: 556 TILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANIICTQPRRISAISVAE 615
Query: 126 RVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAH 185
RV++E ++G VGY IR E S T L Y T G+LLR D L+ I++DE H
Sbjct: 616 RVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDATLQGVTHIIVDEVH 675
Query: 186 ERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFY 245
ERT +D L+ VLK+++ QRA L++++MSATLDAG F +YF P++ +PGR PV+ F+
Sbjct: 676 ERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFF 735
Score = 59 (25.8 bits), Expect = 5.3e-43, Sum P(2) = 5.3e-43
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
F P + K+ A+ K+ FA + D+L LL Y ++
Sbjct: 1102 FVSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQ 1137
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 429 (156.1 bits), Expect = 6.1e-43, Sum P(2) = 6.1e-43
Identities = 88/191 (46%), Positives = 128/191 (67%)
Query: 58 RITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAKA-VACTQ 114
R LP F+ + EF+ ++QNQ +V+ GETG GKTTQ+PQ+ +E S GA + CTQ
Sbjct: 225 REKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQ 284
Query: 115 PRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLE 174
PRR++A+SVA R+S E +G+ VGY IR E S +T L + T G+LLR + DP L
Sbjct: 285 PRRISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNLT 344
Query: 175 NYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNV 234
N +L+DE HER + D L+ +L++++ +R DL+L++MSAT++A F YF N+P M++
Sbjct: 345 NVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHI 404
Query: 235 PGRTHPV-EIF 244
PG T PV E+F
Sbjct: 405 PGFTFPVAELF 415
Score = 62 (26.9 bits), Expect = 6.1e-43, Sum P(2) = 6.1e-43
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 261 FTRPNEAKKAADDAKMRFAHID-GDHLTLLNVYHAFK 296
F P K+ AD+AK FA DH+ LL Y ++
Sbjct: 747 FVLPLNRKEEADEAKRYFAGDSCSDHIALLKAYEGYR 783
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 93/229 (40%), Positives = 139/229 (60%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
R +L R+R LP+ +Y + L ++Q +V+ G+TG GK+TQ+PQ Y + G
Sbjct: 151 RLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQ----YLLAAGFSH 206
Query: 110 VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS 169
VACTQPRR+A +S+A+RV E Q G +VGY IRFE S T + ++T G+LLR+
Sbjct: 207 VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQR 266
Query: 170 DPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNA 229
+P L Y+V+++DE HER L D L+GVL+ ++ R DLK+++MSAT++ F YF NA
Sbjct: 267 EPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNA 326
Query: 230 PLMNVPGRTHPVEIFYTPEPPLGAGPWLPQCFTRPNEAKKAADDAKMRF 278
P++ VPGR P+ +F A P + +C N A+ + +RF
Sbjct: 327 PVVQVPGRLFPITVFDV------APPGVRKCILSTNIAETSVTIDGIRF 369
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 435 (158.2 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 95/240 (39%), Positives = 147/240 (61%)
Query: 10 DPYITKKNREERLATVNASVSTSIASNLQV-NPFTGYPYTPRYHELHRKRITLPVFEYRT 68
+ Y+ K R + + + A N ++ F + ++H + ++R LP +E R
Sbjct: 495 ESYVNLKKRSYK--RYDRPAKSLFAENSKICRQFQMKQASRQFHAILQERQLLPAWEERE 552
Query: 69 EFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVA---CTQPRRVAAMSVAQ 125
+ LL+++Q +V+ G TG GKTTQIPQ+ ++ S + + VA CTQPRR++A+SVA+
Sbjct: 553 TILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANIICTQPRRISAISVAE 612
Query: 126 RVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAH 185
RV++E ++G VGY IR E S T L Y T G+LLR D L+ I++DE H
Sbjct: 613 RVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDATLQGVTHIIVDEVH 672
Query: 186 ERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFY 245
ERT +D L+ VLK+++ QRA L++++MSATLDAG F +YF P++ +PGR PV+ F+
Sbjct: 673 ERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFF 732
Score = 59 (25.8 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
F P + K+ A+ K+ FA + D+L LL Y ++
Sbjct: 1099 FVSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQ 1134
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 456 (165.6 bits), Expect = 5.6e-42, P = 5.6e-42
Identities = 93/226 (41%), Positives = 136/226 (60%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
R L R+R LP+ +YR + L ++Q +V+ G+TG GK+TQ+PQ Y + G
Sbjct: 151 RLARLQRERAALPISQYRDRILQTLKEHQVVVVAGDTGCGKSTQVPQ----YLLAAGFSH 206
Query: 110 VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS 169
VACTQPRR+A +S+A+RV E Q G +VGY IRFE S T + ++T G+LLR
Sbjct: 207 VACTQPRRIACISLAKRVGLESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRHVQR 266
Query: 170 DPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNA 229
+P L Y+V+++DE HER L D L+GVL+ ++ +R DLK+++MSAT++ F YF A
Sbjct: 267 EPTLPQYRVLIVDEVHERHLHNDFLLGVLQRLLPRRPDLKVILMSATVNTSLFSAYFGQA 326
Query: 230 PLMNVPGRTHPVEIFYTPEPPLGAGPWLPQCFTRPNEAKKAADDAK 275
P++ VPGR P+ + Y P+ L + RP A D+K
Sbjct: 327 PVVQVPGRLFPITVVYQPQEAEPTASTLEKLDPRPFIRVLEAIDSK 372
>RGD|1591766 [details] [associations]
symbol:Dqx1 "DEAQ box RNA-dependent ATPase 1" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
RGD:1591766 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH473957
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
CTD:165545 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3 IPI:IPI00194915
RefSeq:NP_001102877.1 UniGene:Rn.154059 Ensembl:ENSRNOT00000011002
GeneID:680434 KEGG:rno:680434 UCSC:RGD:1591766 NextBio:718702
Uniprot:D4A474
Length = 717
Score = 401 (146.2 bits), Expect = 8.4e-42, Sum P(2) = 8.4e-42
Identities = 88/207 (42%), Positives = 134/207 (64%)
Query: 35 SNLQVNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQC-IVLV-GETGSGKTT 92
S L VNPF G P++ Y+EL +R LP++ R F+ L + +VLV GE GSGK+T
Sbjct: 16 SELAVNPFDGLPFSSCYYELLEQRRALPIWAARFLFLEHLESSPTGVVLVSGEPGSGKST 75
Query: 93 QIPQWCVEYSKSVGAKA--VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSS 150
QIPQWC E++ + G + V TQP +AAMS+A RV++EMD LG E+GYSI EDC+
Sbjct: 76 QIPQWCAEFALARGFQTGQVTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTG 135
Query: 151 PKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQR--ADL 208
P T+L++ D + L+E S + V++LDEA ER++A+D+L G+L++ + D
Sbjct: 136 PNTMLRFCWDRLFLQEVASTRGPGAWSVLVLDEAQERSVASDLLQGLLRDTRLRNLPGDP 195
Query: 209 KLVIMSATLDAGKFQQYFDNAPLMNVP 235
++VI++ + KFQ ++ N+P ++VP
Sbjct: 196 RVVIVTDSALEPKFQAFWGNSPTVHVP 222
Score = 72 (30.4 bits), Expect = 8.4e-42, Sum P(2) = 8.4e-42
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 261 FTRPNEAKKAADDAKMR--FAHIDGDHLTLLNVYHAFKQ 297
FTRP A +A +R H DGDH +L+ VY AF Q
Sbjct: 503 FTRP---PLCAGEAALRRGLEHADGDHSSLIQVYEAFVQ 538
>MGI|MGI:2136388 [details] [associations]
symbol:Dqx1 "DEAQ RNA-dependent ATPase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=ISA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 MGI:MGI:2136388 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 GO:GO:0016887 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AF318278 EMBL:BC048936 EMBL:BC075680
IPI:IPI00125675 IPI:IPI00844713 RefSeq:NP_291084.1
UniGene:Mm.140332 ProteinModelPortal:Q924H9 SMR:Q924H9
PhosphoSite:Q924H9 PRIDE:Q924H9 Ensembl:ENSMUST00000077502
GeneID:93838 KEGG:mmu:93838 UCSC:uc009cmc.1 UCSC:uc009cmd.1
InParanoid:Q924H9 NextBio:351693 Bgee:Q924H9 CleanEx:MM_DQX1
Genevestigator:Q924H9 Uniprot:Q924H9
Length = 718
Score = 398 (145.2 bits), Expect = 8.9e-42, Sum P(2) = 8.9e-42
Identities = 86/207 (41%), Positives = 133/207 (64%)
Query: 35 SNLQVNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQC-IVLV-GETGSGKTT 92
S L VNPF G P++ Y+EL +R LP++ R F+ L + +VLV G+ GSGK+T
Sbjct: 16 SELAVNPFDGLPFSSCYYELLEQRRALPIWAARFLFLEHLESSPTGVVLVSGDPGSGKST 75
Query: 93 QIPQWCVEYSKSVGAKA--VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSS 150
QIPQWC E++ + G + V TQP +AAMS+A RV++EMD LG E+GYSI EDC+
Sbjct: 76 QIPQWCAEFALARGFQTGQVTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTG 135
Query: 151 PKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQR--ADL 208
P T+L++ D + L+E S + V++LDEA ER++A+D+L G+L++ + D
Sbjct: 136 PNTMLRFCWDRLFLQEVASTRGPGAWSVLILDEAQERSVASDLLQGLLRDTRLRNLPGDP 195
Query: 209 KLVIMSATLDAGKFQQYFDNAPLMNVP 235
++V+++ KFQ ++ N+P++ VP
Sbjct: 196 RVVVVTDPALEPKFQAFWGNSPIVRVP 222
Score = 75 (31.5 bits), Expect = 8.9e-42, Sum P(2) = 8.9e-42
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 261 FTRPNEAKKAADDAKMRFA--HIDGDHLTLLNVYHAFKQ 297
FTRP +A +A +R A H DGDH +L+ VY AF Q
Sbjct: 503 FTRP---PLSAGEAALRRALEHADGDHSSLIQVYEAFVQ 538
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 433 (157.5 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 98/240 (40%), Positives = 147/240 (61%)
Query: 10 DPYITKKNREERLATVNASVSTSIASNLQV-NPFTGYPYTPRYHELHRKRITLPVFEYRT 68
+ Y+ K + R V+ S ST N+++ F + R+ + +R LP ++ R
Sbjct: 487 ESYVNLKKKLSRKYDVH-SKST-YNENVKICMQFRLKKSSRRFQSMLHERQKLPAWQERE 544
Query: 69 EFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVA---CTQPRRVAAMSVAQ 125
+ LL +Q +V+ G TG GKTTQIPQ+ ++ S AVA CTQPRR++A+SVA+
Sbjct: 545 TILDLLTSHQVLVVSGMTGCGKTTQIPQFILDASLQGSPNAVANIICTQPRRISAISVAE 604
Query: 126 RVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAH 185
RV++E ++G VGY IR E S T L Y T G+LLR D L+ +++DE H
Sbjct: 605 RVAKERTERVGVTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDLTLQGITHVIVDEVH 664
Query: 186 ERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFY 245
ERT +D L+ VLK+++ QR DL++++MSATL+A F QYF + P++N+PGRT PV+ F+
Sbjct: 665 ERTEESDFLLLVLKDIMVQRPDLRIILMSATLNAELFSQYFHSCPIINIPGRTFPVDQFF 724
Score = 52 (23.4 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
F P + ++ A+ K+ FA + D+L LL Y ++
Sbjct: 1090 FVSPWDKREEANKKKLDFAVGNSDYLALLQAYKGWR 1125
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 423 (154.0 bits), Expect = 9.8e-42, Sum P(2) = 9.8e-42
Identities = 87/199 (43%), Positives = 134/199 (67%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
++ + ++R +LP +E R + LL+++Q +V+ G TG GKTTQIPQ+ ++ S S +
Sbjct: 529 QFQSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCGKTTQIPQFILDDSLSGPPEK 588
Query: 110 VA---CTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLRE 166
VA CTQPRR++A+SVA+RV++E ++G VGY IR E S T L Y T G+LLR
Sbjct: 589 VANIICTQPRRISAISVAERVAKERTERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRR 648
Query: 167 GMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYF 226
D L+ I++DE HERT +D L+ VLK+++ QR +L++++MSATL+A F +YF
Sbjct: 649 LEGDTSLQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPNLQVILMSATLNAELFSEYF 708
Query: 227 DNAPLMNVPGRTHPVEIFY 245
+ P++ +PGRT PV+ F+
Sbjct: 709 SSCPVITIPGRTFPVDQFF 727
Score = 62 (26.9 bits), Expect = 9.8e-42, Sum P(2) = 9.8e-42
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
F P + K+ A+ K+ FA + D+L LL Y ++
Sbjct: 1093 FVSPWDKKEEANQKKLEFAFANSDYLALLRAYKGWQ 1128
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 431 (156.8 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 89/205 (43%), Positives = 143/205 (69%)
Query: 48 TPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVG- 106
+PRY + R R+ LP++ +R + ++ + Q+Q +++ GETG GK+TQ+P + +E+ + G
Sbjct: 678 SPRYQNMLRSRMQLPMWAFREQVLSAVDQHQVVIVCGETGCGKSTQVPSFLLEHQLAQGK 737
Query: 107 AKAVACTQPRRVAAMSVAQRVSEEMD---CQLGQE---VGYSIRFEDCSSPKTVLKYMTD 160
A + CT+PRR++A+S+A+RVSEE+ LG VGYSIR E +S +T L + T
Sbjct: 738 ACKIYCTEPRRISAISLARRVSEELGEGRNDLGTSRSLVGYSIRLEANTSRETRLVFATT 797
Query: 161 GMLLR--EGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLD 218
G+++R EG +D L + ++LDE HER++ +D L+ VLK+++ +R DLK+V+MSAT+D
Sbjct: 798 GIVMRMLEGSND--LRDITHLVLDEVHERSIDSDFLLIVLKKLMTRRKDLKVVLMSATVD 855
Query: 219 AGKFQQYFDNAPLMNVPGRTHPVEI 243
A +F Y D AP++NVPGRT PV++
Sbjct: 856 ADRFSNYLDGAPVLNVPGRTFPVQV 880
Score = 55 (24.4 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
F P + AD ++ F D D LT+ N Y ++K+
Sbjct: 1210 FVAPFGQRSQADTVRLGFRRGDSDILTVYNAYLSWKR 1246
>UNIPROTKB|E2QXW1 [details] [associations]
symbol:DQX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:165545 KO:K14433 OMA:CGQAVQA
EMBL:AAEX03010965 RefSeq:XP_532994.2 Ensembl:ENSCAFT00000013395
GeneID:475784 KEGG:cfa:475784 NextBio:20851558 Uniprot:E2QXW1
Length = 719
Score = 398 (145.2 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 89/207 (42%), Positives = 134/207 (64%)
Query: 35 SNLQVNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQC-IVLV-GETGSGKTT 92
S L VNPF G P++ RY+EL +R LP++ R F+ L + +VLV GE GSGK+T
Sbjct: 19 SELAVNPFDGLPFSSRYYELLEQRRALPIWATRFIFLEQLESSPSGVVLVSGEPGSGKST 78
Query: 93 QIPQWCVEYSKSVGAKA--VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSS 150
QIPQWC E++ + G K V TQP +AA+S+A RV++EMD LGQEVGYSI EDC+
Sbjct: 79 QIPQWCAEFALARGFKEGRVTVTQPYPLAALSLAVRVADEMDLTLGQEVGYSIPQEDCTG 138
Query: 151 PKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLK--EVIKQRADL 208
P T+L++ D +LL+E S + V++LDEA ER++A+D+L G+L+ ++ D
Sbjct: 139 PDTLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVASDLLQGLLRNAKLGNLPGDS 198
Query: 209 KLVIMSATLDAGKFQQYFDNAPLMNVP 235
++V+++ K Q ++ N +++VP
Sbjct: 199 RVVVVTDPALEPKLQAFWGNPTIVHVP 225
Score = 72 (30.4 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 261 FTRPNEAKKAADDAKMRFA--HIDGDHLTLLNVYHAFKQ 297
FT P +A++A +R A H DGDH +L+ VY AF Q
Sbjct: 505 FTHP---PLSAEEAALRRALEHADGDHSSLIQVYEAFIQ 540
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 418 (152.2 bits), Expect = 3.4e-41, Sum P(2) = 3.4e-41
Identities = 86/199 (43%), Positives = 132/199 (66%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
++ + ++R +LP +E R + LL ++Q +V+ G TG GKTTQIPQ+ ++ S + +
Sbjct: 533 QFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEK 592
Query: 110 VA---CTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLRE 166
VA CTQPRR++A+SVA+RV++E ++G VGY IR E S T L Y T G+LLR
Sbjct: 593 VANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRR 652
Query: 167 GMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYF 226
D L+ I++DE HERT +D L+ VLK+++ QR L++++MSATL+A F YF
Sbjct: 653 LEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYF 712
Query: 227 DNAPLMNVPGRTHPVEIFY 245
++ P++ +PGRT PV+ F+
Sbjct: 713 NSCPVITIPGRTFPVDQFF 731
Score = 62 (26.9 bits), Expect = 3.4e-41, Sum P(2) = 3.4e-41
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
F P + K+ A+ K+ FA + D+L LL Y ++
Sbjct: 1097 FVSPWDKKEEANQKKLEFAFANSDYLALLQAYKGWQ 1132
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 421 (153.3 bits), Expect = 4.7e-41, Sum P(2) = 4.7e-41
Identities = 88/200 (44%), Positives = 125/200 (62%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVG--- 106
RY + +R LP ++ R + L +NQ +V+ G TG GKTTQIPQ+ ++ G
Sbjct: 571 RYISMQEQRQKLPAWQKREAILECLVKNQVLVISGMTGCGKTTQIPQFILDNFLQTGRPD 630
Query: 107 -AKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLR 165
+ CTQPRR++A++VA RV++E LG GY IR E S T L + T G+LLR
Sbjct: 631 RVANIICTQPRRISAIAVATRVAQERAEALGHSTGYQIRLETVRSSITRLMFCTTGVLLR 690
Query: 166 EGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQY 225
DP L +++DE HERT +D L+ VLK++I +R DLK+++MSATL+A F QY
Sbjct: 691 RLEGDPELSGVTHVIVDEVHERTEESDFLLLVLKDLIVKRTDLKVIMMSATLNAELFSQY 750
Query: 226 FDNAPLMNVPGRTHPVEIFY 245
F+N P +++PGRT PVE F+
Sbjct: 751 FNNCPCIHIPGRTFPVEQFF 770
Score = 58 (25.5 bits), Expect = 4.7e-41, Sum P(2) = 4.7e-41
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVY 292
F P + ++ A++ K+ F+ + DHL L+ Y
Sbjct: 1140 FVSPWDKREEANEKKLAFSLANSDHLALMQAY 1171
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 416 (151.5 bits), Expect = 5.5e-41, Sum P(2) = 5.5e-41
Identities = 86/199 (43%), Positives = 134/199 (67%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
++ + ++R +LP +E R + LL+++Q +V+ G TG GKTTQIPQ+ ++ S + +
Sbjct: 526 QFQSVLQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFILDDSLNGPPEK 585
Query: 110 VA---CTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLRE 166
VA CTQPRR++A+SVA+RV++E ++G VGY IR E S T L Y T G+LLR
Sbjct: 586 VANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRR 645
Query: 167 GMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYF 226
D L+ I++DE HERT +D L+ VLK+++ QR L++++MSATL+A F +YF
Sbjct: 646 LEGDTALQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVILMSATLNAELFSEYF 705
Query: 227 DNAPLMNVPGRTHPVEIFY 245
++ P++ +PGRT PV+ F+
Sbjct: 706 NSCPVITIPGRTFPVDQFF 724
Score = 62 (26.9 bits), Expect = 5.5e-41, Sum P(2) = 5.5e-41
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
F P + K+ A+ K+ FA + D+L LL Y ++
Sbjct: 1092 FVSPWDKKEEANQKKLEFAFANSDYLALLRAYKGWQ 1127
>UNIPROTKB|Q3ZBE0 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0004386
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 EMBL:BC103411 IPI:IPI00704154
RefSeq:NP_001030399.1 UniGene:Bt.49583 PRIDE:Q3ZBE0
Ensembl:ENSBTAT00000033191 GeneID:517947 KEGG:bta:517947 CTD:165545
InParanoid:Q3ZBE0 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3
NextBio:20872543 Uniprot:Q3ZBE0
Length = 719
Score = 382 (139.5 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 88/210 (41%), Positives = 131/210 (62%)
Query: 35 SNLQVNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQC-IVLV-GETGSGKTT 92
S L VNPF G P++ RY++L +R +LPV+ R F+ L + +VLV GE G GK+T
Sbjct: 19 SELAVNPFDGLPFSSRYYKLLEQRRSLPVWAARFIFLEHLESSPSGVVLVSGEPGCGKST 78
Query: 93 QIPQWCVEYSKSVGAKA--VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSS 150
QIPQWC E+ + G + V TQP +AA+S+A RV++EMD LG EVGYSI EDC+
Sbjct: 79 QIPQWCAEFVLARGFQKGWVTVTQPYPLAALSLALRVADEMDLTLGHEVGYSIPQEDCTG 138
Query: 151 PKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVI--KQRADL 208
P T+L++ D +LL+E S V++LDEA ER++A+D+L G+L++ DL
Sbjct: 139 PDTLLRFCWDRLLLQEVASTRGTGARGVLILDEAQERSVASDLLQGLLRDARLGSLPGDL 198
Query: 209 KLVIMSATLDAGKFQQYFDNAPLMNVPGRT 238
++V+++ K Q ++ P + VP +T
Sbjct: 199 RVVVVTDPSLEPKLQDFWGGPPTVCVPRKT 228
Score = 80 (33.2 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 261 FTRPNEAKKAADDAKMRFA--HIDGDHLTLLNVYHAFKQ 297
FTRP A++A +R A H+DGDH +L+ VY AF Q
Sbjct: 505 FTRP---PVCAEEAALRRALEHVDGDHSSLIQVYEAFIQ 540
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 408 (148.7 bits), Expect = 4.3e-40, Sum P(2) = 4.3e-40
Identities = 85/191 (44%), Positives = 122/191 (63%)
Query: 58 RITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA---VACTQ 114
R TLP F+ + + +A+NQ IV+ GETG GKTTQ+PQ+ +E G A + CTQ
Sbjct: 257 RKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAFCNIICTQ 316
Query: 115 PRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLE 174
PRR++AM+V++RVS E LG+ VG+ +R E T L + T G+LLR +SD L
Sbjct: 317 PRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSDRNLN 376
Query: 175 NYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNV 234
+ +DE HER + D L+ VLKE++ +R DL+LV+MSATL+A F Y+ AP +++
Sbjct: 377 GVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELFSNYYGGAPTIHI 436
Query: 235 PGRTHPVEIFY 245
PG THPV+ +
Sbjct: 437 PGFTHPVKAHF 447
Score = 59 (25.8 bits), Expect = 4.3e-40, Sum P(2) = 4.3e-40
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 261 FTRPNEAKKAADDAKMRFAHID-GDHLTLLNVYHAFK 296
F P + K A AK+RF+ D DH+ L+ + +K
Sbjct: 783 FLLPQDKKDLALSAKLRFSAKDYSDHMALVRAFEGWK 819
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 402 (146.6 bits), Expect = 5.1e-40, Sum P(2) = 5.1e-40
Identities = 82/191 (42%), Positives = 124/191 (64%)
Query: 58 RITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAK-AVACTQ 114
R TLP ++ + + +A NQ +V+ GETG GKTTQ+PQ+ +E + GA ++ CTQ
Sbjct: 296 RKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQ 355
Query: 115 PRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLE 174
PRR++A+SV++RV+ E Q+G+ VGY +R E T L + T G+LLR + D L+
Sbjct: 356 PRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLK 415
Query: 175 NYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNV 234
+++DE HER + D L+ VLK+++ +R DLKL++MSATL+A F YF AP M++
Sbjct: 416 GVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHI 475
Query: 235 PGRTHPVEIFY 245
PG T+PV +
Sbjct: 476 PGFTYPVRAHF 486
Score = 65 (27.9 bits), Expect = 5.1e-40, Sum P(2) = 5.1e-40
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 261 FTRPNEAKKAADDAKMRFAHID-GDHLTLLNVYHAFK 296
F P + K A+ A+ +F+ D DHLTL+ Y+ +K
Sbjct: 822 FLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWK 858
>UNIPROTKB|Q5THQ9 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL023803
UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI01009669 SMR:Q5THQ9
Ensembl:ENST00000441485 HOGENOM:HOG000202213 HOVERGEN:HBG079487
Uniprot:Q5THQ9
Length = 302
Score = 397 (144.8 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
Identities = 83/165 (50%), Positives = 111/165 (67%)
Query: 96 QWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSP-KTV 154
++ E + + V TQPRRVAA++VA RV+EE LG EVGY IRF+DC+ T
Sbjct: 54 KYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATR 113
Query: 155 LKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMS 214
+K++TDGML+RE M DP+L Y VI+LDEAHERTL TDI +G+LK++ K+R DL+L++ S
Sbjct: 114 IKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVAS 173
Query: 215 ATLDAGKFQQYF----------DNAPLMNVPGRTHPVEIFYTPEP 249
ATLDA KF+ +F D ++ V GRT PV+IFY P
Sbjct: 174 ATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSP 218
Score = 43 (20.2 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
Identities = 19/52 (36%), Positives = 23/52 (44%)
Query: 21 RLATVNASVSTSIA-SNLQVNPFTGYPYTPRYHEL--HRKRITLPVFEYRTE 69
R T VS S +L N T Y P Y L ++R LPVF+Y E
Sbjct: 8 RPGTEGPGVSISEERQSLAENSGTTVVYNP-YAALSIEQQRQKLPVFKYLAE 58
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 74/129 (57%), Positives = 104/129 (80%)
Query: 121 MSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVIL 180
MSVA+RVSEEM LG+EVGY+IRFEDC+S T++KYMTDG+LLRE + + L++Y I+
Sbjct: 1 MSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAII 60
Query: 181 LDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHP 240
+DEAHER+L TD+L G+L+EV+ +R+DLKL++ SAT+DA KF +F N P+ ++PGRT P
Sbjct: 61 MDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFP 120
Query: 241 VEIFYTPEP 249
V+I ++ P
Sbjct: 121 VDILFSKTP 129
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 391 (142.7 bits), Expect = 9.6e-39, Sum P(2) = 9.6e-39
Identities = 81/203 (39%), Positives = 130/203 (64%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGA 107
RY ++ R LP F + L+ + +V+ GETG GK+TQ+PQ+ ++ + +++
Sbjct: 442 RYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQL 501
Query: 108 KA--------VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMT 159
A + CTQPRR++A+ VA+RV+ E ++GQ VGY IR E+ S T L + T
Sbjct: 502 PAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCT 561
Query: 160 DGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDA 219
G+LLR SDP+L + +++DE HER+ +D L+ +LK ++++R DLK+++MSATL+A
Sbjct: 562 TGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNA 621
Query: 220 GKFQQYFDNAPLMNVPGRTHPVE 242
F YF AP++++PGRT PV+
Sbjct: 622 ALFSDYFGGAPVLDIPGRTFPVQ 644
Score = 65 (27.9 bits), Expect = 9.6e-39, Sum P(2) = 9.6e-39
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVY 292
F P + AD K FA + DHLT+LN Y
Sbjct: 1001 FVSPLNKRTEADKCKRMFALGNSDHLTVLNAY 1032
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 394 (143.8 bits), Expect = 1.6e-38, Sum P(2) = 1.6e-38
Identities = 89/213 (41%), Positives = 136/213 (63%)
Query: 48 TPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSV 105
TP Y ++ +R LP + R E + +A++Q ++ GETGSGK+TQ Q+ ++ Y + +
Sbjct: 620 TPEYRKMLGQRQKLPAWLLRDEIVRTVAEHQVTIIAGETGSGKSTQSVQFILDDLYGRGL 679
Query: 106 GAKA-VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLL 164
G A + TQPRR++A+ +A RVS+E Q+GQEVGY IR E + PKT + ++T G+LL
Sbjct: 680 GHAANILVTQPRRISALGLADRVSDERCSQVGQEVGYIIRGESRTGPKTRITFVTTGVLL 739
Query: 165 RE----G--MSDPM--LENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSAT 216
R G + D + L + +++DE HER+L TD L+ ++++V+KQR DLKLV+MSAT
Sbjct: 740 RRLQVSGGRVEDVVASLADVSHVVIDEVHERSLDTDFLLSIIRDVLKQRRDLKLVLMSAT 799
Query: 217 LDAGKFQQYF--DNAPL--MNVPGRTHPVEIFY 245
LD+ F YF D + + + GRT PV +Y
Sbjct: 800 LDSATFASYFVQDGIRVGQVEIAGRTFPVTDYY 832
Score = 61 (26.5 bits), Expect = 1.6e-38, Sum P(2) = 1.6e-38
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAF 295
F P + + A +A+ RFA DGD LT L + A+
Sbjct: 1125 FVSPPDKRDQAREARARFAAGDGDLLTDLRAFQAW 1159
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 401 (146.2 bits), Expect = 2.4e-38, Sum P(2) = 2.4e-38
Identities = 85/199 (42%), Positives = 128/199 (64%)
Query: 49 PRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-Y-SKSVG 106
PRY E+ R R LP + + E + L+ +Q V+ GETG GKTTQ+ Q+ ++ Y + +G
Sbjct: 187 PRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGIG 246
Query: 107 AKA-VACTQPRRVAAMSVAQRVSEEM--DCQLGQEVGYSIRFEDCSSPKT-VLKYMTDGM 162
+ + CTQPRR++A+SVA+RV+ E C G GY IR + K + Y T G+
Sbjct: 247 SACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGI 306
Query: 163 LLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKF 222
+L+ SD L + I+LDE HER L +D+LM V+K+++ R+DLK+++MSATL+A KF
Sbjct: 307 ILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKF 366
Query: 223 QQYFDNAPLMNVPGRTHPV 241
+YF N P++++PG T PV
Sbjct: 367 SEYFGNCPMIHIPGFTFPV 385
Score = 47 (21.6 bits), Expect = 2.4e-38, Sum P(2) = 2.4e-38
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 261 FTRPNEAKKAADDAKMRFA-HIDGDHLTLLNVYHAFKQ 297
F P +K AD + A DHLT++N + +++
Sbjct: 723 FVIPLGKEKIADARRKELAKETRSDHLTVVNAFEGWEE 760
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 394 (143.8 bits), Expect = 5.6e-38, Sum P(2) = 5.6e-38
Identities = 87/216 (40%), Positives = 134/216 (62%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-Y-SKSVGA 107
RY E+ R LP + + E + L+ +Q V+ GETG GKTTQ+ Q+ ++ Y + G+
Sbjct: 110 RYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGS 169
Query: 108 KA-VACTQPRRVAAMSVAQRVSEEM--DCQLGQEVGYSIRFEDCSSPKT-VLKYMTDGML 163
+ CTQPRR++A+SVA+RV+ E C G GY IR + K + Y T G++
Sbjct: 170 ACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGII 229
Query: 164 LREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQ 223
L+ SDP L + I+LDE HER L +D+LM V+K+++ R+DLK+++MSATL+A KF
Sbjct: 230 LQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFS 289
Query: 224 QYFDNAPLMNVPGRTHPVEIFYTPEPPLGAGPWLPQ 259
+YF N P++++PG T PV + Y E + ++P+
Sbjct: 290 EYFGNCPMIHIPGFTFPV-VEYLLEDVIEKIRYVPE 324
Score = 46 (21.3 bits), Expect = 5.6e-38, Sum P(2) = 5.6e-38
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 261 FTRPNEAKKAADDAKMRFAH-IDGDHLTLLNVYHAFKQ 297
F P +K AD + A DHLT++N + +++
Sbjct: 645 FVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEE 682
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 391 (142.7 bits), Expect = 6.6e-38, Sum P(2) = 6.6e-38
Identities = 77/188 (40%), Positives = 124/188 (65%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAA 120
LPV+ + + ++ LA + IV+ TGSGKTTQ+P E + G A+ TQPRR+A
Sbjct: 7 LPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGYNEGG-AIGVTQPRRIAV 65
Query: 121 MSVAQRVSEE-MDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVI 179
+SV++ ++++ + Q G VGY +RFED + +T +K MTDG+LL+E DP+L Y +I
Sbjct: 66 LSVSEFIAKQVLHVQPGI-VGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPLLSKYSII 124
Query: 180 LLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTH 239
++DEAHER+L D ++G+LK V++QR D ++VI SAT++ F +YF+ P++ + +
Sbjct: 125 MVDEAHERSLNIDFILGLLKRVLQQRHDFRIVISSATINTAMFSRYFNECPVIKIDAVAY 184
Query: 240 PVEIFYTP 247
PV + + P
Sbjct: 185 PVTVIFDP 192
Score = 43 (20.2 bits), Expect = 6.6e-38, Sum P(2) = 6.6e-38
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 258 PQCFTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
P F+ E K A F+ GD ++ L +Y A+ Q
Sbjct: 465 PLIFSEDQEEK--TKKAHGTFSDPMGDFVSFLRIYRAYAQ 502
>UNIPROTKB|F1S4S9 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR006575
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00642
Pfam:PF05773 PROSITE:PS50103 SMART:SM00356 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR026290 PANTHER:PTHR11224 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU694750
Ensembl:ENSSSCT00000009281 OMA:HRYPYQA Uniprot:F1S4S9
Length = 745
Score = 413 (150.4 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 85/199 (42%), Positives = 134/199 (67%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
++ + ++R +LP +E R + LL+++Q +V+ G TG GKTTQIPQ+ ++ S + +
Sbjct: 459 QFQSILQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFILDDSLNGPPEK 518
Query: 110 VA---CTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLRE 166
VA CTQPRR++A+SVA+RV++E ++G VGY IR E S T L Y T G+LLR
Sbjct: 519 VANIVCTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRR 578
Query: 167 GMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYF 226
D L+ I++DE HERT +D L+ VLK+++ QR L++++MSATL+A F +YF
Sbjct: 579 LEGDTALQGVTHIIVDEVHERTEESDFLLLVLKDILLQRPTLQVILMSATLNAELFSEYF 638
Query: 227 DNAPLMNVPGRTHPVEIFY 245
++ P++ +PGRT PV+ ++
Sbjct: 639 NSCPVITIPGRTFPVDQYF 657
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 396 (144.5 bits), Expect = 8.4e-38, Sum P(2) = 8.4e-38
Identities = 85/199 (42%), Positives = 127/199 (63%)
Query: 49 PRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-Y-SKSVG 106
PRY E+ R R LP + + E + L+ +Q V+ GETG GKTTQ+ Q+ ++ Y + G
Sbjct: 188 PRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGKG 247
Query: 107 AKA-VACTQPRRVAAMSVAQRVSEEM--DCQLGQEVGYSIRFEDCSSPKT-VLKYMTDGM 162
+ + CTQPRR++A+SVA+RV+ E C G GY IR + K + Y T G+
Sbjct: 248 SACRIVCTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGI 307
Query: 163 LLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKF 222
+L+ SD L + I+LDE HER L +D+LM V+K+++ R+DLK+++MSATL+A KF
Sbjct: 308 ILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKF 367
Query: 223 QQYFDNAPLMNVPGRTHPV 241
+YF N P++++PG T PV
Sbjct: 368 SEYFGNCPMIHIPGFTFPV 386
Score = 47 (21.6 bits), Expect = 8.4e-38, Sum P(2) = 8.4e-38
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 261 FTRPNEAKKAADDAKMRFA-HIDGDHLTLLNVYHAFKQ 297
F P +K AD + A DHLT++N + +++
Sbjct: 724 FVIPLGKEKIADARRKELAKETRSDHLTVVNAFEGWEE 761
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 397 (144.8 bits), Expect = 8.7e-38, Sum P(2) = 8.7e-38
Identities = 90/226 (39%), Positives = 138/226 (61%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-Y-SKSVGA 107
RY E+ R R LP + + E + ++ +Q V+ GETG GKTTQ+ Q+ ++ Y + G+
Sbjct: 198 RYIEMQRFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGS 257
Query: 108 KA-VACTQPRRVAAMSVAQRVSEEM--DCQLGQEVGYSIRFEDCSSPKT-VLKYMTDGML 163
+ CTQPRR++A+SVA+RV+ E C G GY IR + K + Y T G++
Sbjct: 258 ACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGII 317
Query: 164 LREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQ 223
L+ SDP L + I+LDE HER L +D+LM V+K+++ R DLK+V+MSATL+A KF
Sbjct: 318 LQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKFS 377
Query: 224 QYFDNAPLMNVPGRTHPVEIFYTPEPPLGAGPWLPQCFTRPNEAKK 269
+YF N P++++PG T PV + Y E + ++P+ ++ KK
Sbjct: 378 EYFGNCPMIHIPGFTFPV-VEYLLEDIIEKIRYVPEQKEHRSQFKK 422
Score = 46 (21.3 bits), Expect = 8.7e-38, Sum P(2) = 8.7e-38
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 261 FTRPNEAKKAADDAKMRFAH-IDGDHLTLLNVYHAFKQ 297
F P +K AD + A DHLT++N + +++
Sbjct: 733 FVIPLGKEKVADARRKELAKDTKSDHLTVVNAFKGWEK 770
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 392 (143.0 bits), Expect = 1.4e-37, Sum P(2) = 1.4e-37
Identities = 92/245 (37%), Positives = 147/245 (60%)
Query: 13 ITKKNREERLA-TVNASVSTSIASNLQVNPFTG-----YPYTPRYH---ELHRKRITLPV 63
+T K R E L T +V A N +++ +G P P E R +LPV
Sbjct: 135 VTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQIPVKRGESEFDSFRQSLPV 194
Query: 64 FEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAKAVACTQPRRVAAM 121
FE + E + ++ +N+ +++VGETGSGKTTQIPQ+ ++ + + + + CTQPRR+AA+
Sbjct: 195 FEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCR-IFCTQPRRLAAI 253
Query: 122 SVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS-DPMLENYQVIL 180
+VA+RV+ E ++GQ +GY IR E SPKT+L + T+G+LLR M+ D L ++
Sbjct: 254 AVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTHVI 313
Query: 181 LDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHP 240
+DE HER +D L+ L++++++ LKL++ SA LD F +YF + P++ + GR
Sbjct: 314 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 373
Query: 241 V-EIF 244
V E+F
Sbjct: 374 VKEMF 378
Score = 49 (22.3 bits), Expect = 1.4e-37, Sum P(2) = 1.4e-37
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 261 FTRPNEA--KKAADDAKMRF-AHIDGDHLTLLNVYHAFKQ 297
F P +A K+AA + RF A DH+ LL + A+++
Sbjct: 869 FVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQK 908
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 393 (143.4 bits), Expect = 1.4e-37, Sum P(2) = 1.4e-37
Identities = 81/196 (41%), Positives = 122/196 (62%)
Query: 53 ELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVAC 112
E R LP++ YR + + + + Q +VL+GETGSGK+TQ+ Q+ + S ++++ C
Sbjct: 298 ECRRLEDGLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLAD-SGVAASESIVC 356
Query: 113 TQPRRVAAMSVAQRVSEEMD-CQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDP 171
TQPR++AAM++A RV EE C V + F + + YMTD LL+ M D
Sbjct: 357 TQPRKIAAMTLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDR 416
Query: 172 MLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPL 231
L +++DEAHER+L TD+L+ +LK+++ +R DL+LVIMSAT DA + QYF + +
Sbjct: 417 SLSGISCVIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGI 476
Query: 232 MNVPGRTHPVEIFYTP 247
+ V GR PVEI Y+P
Sbjct: 477 LLVNGRNFPVEIVYSP 492
Score = 56 (24.8 bits), Expect = 1.4e-37, Sum P(2) = 1.4e-37
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 268 KKAADDAKMRFAHIDGDHLTLLNVY 292
K AD K++F + +GD TLL+VY
Sbjct: 771 KMKADRLKVQFCNQNGDLFTLLSVY 795
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 395 (144.1 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
Identities = 91/229 (39%), Positives = 138/229 (60%)
Query: 49 PRYHELHRKRITLPVFEYRT--EFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-Y-SKS 104
PRY E+ R R LP + R E + L+ N+ V+ GETG GKTTQ+ Q+ ++ Y +
Sbjct: 174 PRYIEMQRFREKLPSYGMRQKQELVNLINNNRVTVISGETGCGKTTQVTQFILDDYIERG 233
Query: 105 VGAKA-VACTQPRRVAAMSVAQRVSEEMD--CQLGQEVGYSIRFEDCSSPKT-VLKYMTD 160
G+ + CTQPRR++A+SVA+RV+ E C G+ GY IR + K + Y T
Sbjct: 234 KGSTCRIVCTQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTT 293
Query: 161 GMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAG 220
G++L+ SD L + ++LDE HER L +D+LM ++K+++ R DLK+++MSATL+A
Sbjct: 294 GIVLQWLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAE 353
Query: 221 KFQQYFDNAPLMNVPGRTHPVEIFYTPEPPLGAGPWLPQCFTRPNEAKK 269
KF +YFDN P++++PG T PV + Y E + + P+ R KK
Sbjct: 354 KFSEYFDNCPMIHIPGFTFPV-VEYLLEDVIEKLRYTPENTDRRPRWKK 401
Score = 45 (20.9 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 261 FTRPNEAKKAADDAKMRFA-HIDGDHLTLLNVYHAFKQ 297
F P +K AD + + + DHLT++N + +++
Sbjct: 712 FVIPLGKEKVADARRKELSKNTKSDHLTVVNAFTGWEE 749
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 394 (143.8 bits), Expect = 1.7e-37, Sum P(2) = 1.7e-37
Identities = 87/216 (40%), Positives = 134/216 (62%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-Y-SKSVGA 107
RY E+ R LP + + E + L+ +Q V+ GETG GKTTQ+ Q+ ++ Y + G+
Sbjct: 196 RYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGS 255
Query: 108 KA-VACTQPRRVAAMSVAQRVSEEM--DCQLGQEVGYSIRFEDCSSPKT-VLKYMTDGML 163
+ CTQPRR++A+SVA+RV+ E C G GY IR + K + Y T G++
Sbjct: 256 ACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGII 315
Query: 164 LREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQ 223
L+ SDP L + I+LDE HER L +D+LM V+K+++ R+DLK+++MSATL+A KF
Sbjct: 316 LQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFS 375
Query: 224 QYFDNAPLMNVPGRTHPVEIFYTPEPPLGAGPWLPQ 259
+YF N P++++PG T PV + Y E + ++P+
Sbjct: 376 EYFGNCPMIHIPGFTFPV-VEYLLEDVIEKIRYVPE 410
Score = 46 (21.3 bits), Expect = 1.7e-37, Sum P(2) = 1.7e-37
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 261 FTRPNEAKKAADDAKMRFAH-IDGDHLTLLNVYHAFKQ 297
F P +K AD + A DHLT++N + +++
Sbjct: 717 FVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEE 754
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 394 (143.8 bits), Expect = 1.8e-37, Sum P(2) = 1.8e-37
Identities = 87/216 (40%), Positives = 134/216 (62%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-Y-SKSVGA 107
RY E+ R LP + + E + L+ +Q V+ GETG GKTTQ+ Q+ ++ Y + G+
Sbjct: 196 RYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGS 255
Query: 108 KA-VACTQPRRVAAMSVAQRVSEEM--DCQLGQEVGYSIRFEDCSSPKT-VLKYMTDGML 163
+ CTQPRR++A+SVA+RV+ E C G GY IR + K + Y T G++
Sbjct: 256 ACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGII 315
Query: 164 LREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQ 223
L+ SDP L + I+LDE HER L +D+LM V+K+++ R+DLK+++MSATL+A KF
Sbjct: 316 LQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFS 375
Query: 224 QYFDNAPLMNVPGRTHPVEIFYTPEPPLGAGPWLPQ 259
+YF N P++++PG T PV + Y E + ++P+
Sbjct: 376 EYFGNCPMIHIPGFTFPV-VEYLLEDVIEKIRYVPE 410
Score = 46 (21.3 bits), Expect = 1.8e-37, Sum P(2) = 1.8e-37
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 261 FTRPNEAKKAADDAKMRFAH-IDGDHLTLLNVYHAFKQ 297
F P +K AD + A DHLT++N + +++
Sbjct: 731 FVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEE 768
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 381 (139.2 bits), Expect = 2.3e-37, Sum P(2) = 2.3e-37
Identities = 89/214 (41%), Positives = 129/214 (60%)
Query: 47 YTP--RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKS 104
Y P R E+ R+ LP+ + M + +N +++ GETGSGKTTQ+PQ+ E +
Sbjct: 244 YVPVHRTTEVQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYA 303
Query: 105 VGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLL 164
K + T+PRRVAA+++++RV+ EM+ EV Y IRFE +P T +K+MTDG+LL
Sbjct: 304 QH-KMIGVTEPRRVAAIAMSKRVAHEMNLP-ESEVSYLIRFEGNVTPATRIKFMTDGVLL 361
Query: 165 REGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVI----KQRADLKLVIMSATLDAG 220
+E +D +L Y VI+LDEAHER++ TDIL+G+L ++ K+ LKL+IMSATL
Sbjct: 362 KEIETDFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATLRVS 421
Query: 221 KFQQ---YFD-NAPLMNVPGRTHPVEIFYTPEPP 250
F + F PL+ V R PV I + P
Sbjct: 422 DFTENTRLFKIPPPLLKVEARQFPVTIHFQKRTP 455
Score = 61 (26.5 bits), Expect = 2.3e-37, Sum P(2) = 2.3e-37
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 4 RRLDVIDPYITKKNREERLATVNASVSTSIASNLQVNPFTG 44
+RL +D Y+ KK +ER A V A S+ AS L+VN G
Sbjct: 122 KRLPTLDEYLAKK--KERQAQVLAEKSS--ASGLRVNAIKG 158
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 412 (150.1 bits), Expect = 2.7e-37, P = 2.7e-37
Identities = 85/187 (45%), Positives = 124/187 (66%)
Query: 58 RITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGA-KAVACTQ 114
R +LP F+ R +T ++QNQ IV+ GETG GKTTQIPQ+ +E + GA ++ CTQ
Sbjct: 217 RTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSIICTQ 276
Query: 115 PRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLE 174
PRR++AMSV++RV+ E QLG+ VGY +R E T L + T G+LLR + D L
Sbjct: 277 PRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNLR 336
Query: 175 NYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNV 234
+++DE HER + D L+ +LK+++ +R++LKL++MSATLDA F YF A ++ +
Sbjct: 337 GVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFGGAGVIYI 396
Query: 235 PGRTHPV 241
PG T+PV
Sbjct: 397 PGFTYPV 403
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 393 (143.4 bits), Expect = 4.1e-37, Sum P(2) = 4.1e-37
Identities = 92/245 (37%), Positives = 147/245 (60%)
Query: 13 ITKKNREERLA-TVNASVSTSIASNLQVNPFTG-----YPYTPRYH---ELHRKRITLPV 63
+T K R E L T +V A N +++ +G P P E R +LPV
Sbjct: 151 VTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQVPVKRGESEFDSFRQSLPV 210
Query: 64 FEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAKAVACTQPRRVAAM 121
FE + E + ++ +N+ +++VGETGSGKTTQIPQ+ ++ + + + + CTQPRR+AA+
Sbjct: 211 FEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCR-IFCTQPRRLAAI 269
Query: 122 SVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS-DPMLENYQVIL 180
+VA+RV+ E ++GQ +GY IR E SPKT+L + T+G+LLR M+ D L ++
Sbjct: 270 AVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTHVI 329
Query: 181 LDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHP 240
+DE HER +D L+ L++++++ LKL++ SA LD F +YF + P++ + GR
Sbjct: 330 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 389
Query: 241 V-EIF 244
V E+F
Sbjct: 390 VKEMF 394
Score = 49 (22.3 bits), Expect = 4.1e-37, Sum P(2) = 4.1e-37
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 261 FTRPNEA--KKAADDAKMRF-AHIDGDHLTLLNVYHAFKQ 297
F P +A K+AA + RF A DH+ LL + A+++
Sbjct: 885 FVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQK 924
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 392 (143.0 bits), Expect = 5.0e-37, Sum P(2) = 5.0e-37
Identities = 92/245 (37%), Positives = 147/245 (60%)
Query: 13 ITKKNREERLA-TVNASVSTSIASNLQVNPFTG-----YPYTPRYH---ELHRKRITLPV 63
+T K R E L T +V A N +++ +G P P E R +LPV
Sbjct: 135 VTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQIPVKRGESEFDSFRQSLPV 194
Query: 64 FEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAKAVACTQPRRVAAM 121
FE + E + ++ +N+ +++VGETGSGKTTQIPQ+ ++ + + + + CTQPRR+AA+
Sbjct: 195 FEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCR-IFCTQPRRLAAI 253
Query: 122 SVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS-DPMLENYQVIL 180
+VA+RV+ E ++GQ +GY IR E SPKT+L + T+G+LLR M+ D L ++
Sbjct: 254 AVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTHVI 313
Query: 181 LDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHP 240
+DE HER +D L+ L++++++ LKL++ SA LD F +YF + P++ + GR
Sbjct: 314 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 373
Query: 241 V-EIF 244
V E+F
Sbjct: 374 VKEMF 378
Score = 49 (22.3 bits), Expect = 5.0e-37, Sum P(2) = 5.0e-37
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 261 FTRPNEA--KKAADDAKMRF-AHIDGDHLTLLNVYHAFKQ 297
F P +A K+AA + RF A DH+ LL + A+++
Sbjct: 869 FVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQK 908
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 392 (143.0 bits), Expect = 5.0e-37, Sum P(2) = 5.0e-37
Identities = 92/245 (37%), Positives = 147/245 (60%)
Query: 13 ITKKNREERLA-TVNASVSTSIASNLQVNPFTG-----YPYTPRYH---ELHRKRITLPV 63
+T K R E L T +V A N +++ +G P P E R +LPV
Sbjct: 136 VTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQIPVKRGESEFDSFRQSLPV 195
Query: 64 FEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAKAVACTQPRRVAAM 121
FE + E + ++ +N+ +++VGETGSGKTTQIPQ+ ++ + + + + CTQPRR+AA+
Sbjct: 196 FEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCR-IFCTQPRRLAAI 254
Query: 122 SVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS-DPMLENYQVIL 180
+VA+RV+ E ++GQ +GY IR E SPKT+L + T+G+LLR M+ D L ++
Sbjct: 255 AVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTHVI 314
Query: 181 LDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHP 240
+DE HER +D L+ L++++++ LKL++ SA LD F +YF + P++ + GR
Sbjct: 315 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 374
Query: 241 V-EIF 244
V E+F
Sbjct: 375 VKEMF 379
Score = 49 (22.3 bits), Expect = 5.0e-37, Sum P(2) = 5.0e-37
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 261 FTRPNEA--KKAADDAKMRF-AHIDGDHLTLLNVYHAFKQ 297
F P +A K+AA + RF A DH+ LL + A+++
Sbjct: 870 FVLPTQASQKRAAMLCRKRFTAGAFSDHMALLRAFQAWQK 909
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 398 (145.2 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 93/250 (37%), Positives = 152/250 (60%)
Query: 2 SKRRLDVIDPYITKKNREERLATVNASVSTSIASNLQVNPFTGYPYTPRYH---ELHRKR 58
+K R++++ T++ + T N V + + L +G P P E R
Sbjct: 48 NKERIELLPK--TQRGNAFAVETENKEVGKT-SGRLS----SGIPQVPLKRGESEYDSFR 100
Query: 59 ITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAKAVACTQPR 116
+LPVFE + E + ++ +N+ +++VGETGSGKTTQIPQ+ ++ Y V + + CTQPR
Sbjct: 101 QSLPVFEKKEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCYENGVPCR-IFCTQPR 159
Query: 117 RVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS-DPMLEN 175
R+A ++VA+RV+ E ++GQ VGY IR E SP+T+L + T+G+LLR M+ D L
Sbjct: 160 RLAVIAVAERVAAERREKVGQTVGYQIRLESRVSPRTLLTFCTNGILLRTLMAGDSALST 219
Query: 176 YQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVP 235
+++DE HER +D L+ L+++++ + +LKL+I SA LDA F +YF + P++++
Sbjct: 220 VTHVIVDEVHERDRFSDFLLIKLRDILQNQTNLKLIISSAALDANLFIKYFGSCPVIHIQ 279
Query: 236 GRTHPV-EIF 244
GR V E+F
Sbjct: 280 GRPFEVKEMF 289
Score = 39 (18.8 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 261 FTRPNEA--KKAADDAKMRFAH-IDGDHLTLLNVYHAFKQ 297
F P A K+AA + R A DH+ LL + A+++
Sbjct: 781 FVLPTVASQKRAAMLCRKRLAAGTFSDHMVLLRAFQAWQK 820
>UNIPROTKB|I3LRU8 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:FP312685
Ensembl:ENSSSCT00000027576 Uniprot:I3LRU8
Length = 439
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 85/198 (42%), Positives = 125/198 (63%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-Y-SKSVGA 107
RY E+ R LP + + E + ++ +Q V+ GETG GKTTQ+ Q+ ++ Y + G+
Sbjct: 200 RYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGS 259
Query: 108 KA-VACTQPRRVAAMSVAQRVSEEM--DCQLGQEVGYSIRFEDCSSPKT-VLKYMTDGML 163
+ CTQPRR++A+SVA+RV+ E C G GY IR + K + Y T G++
Sbjct: 260 ACRIVCTQPRRISAISVAERVAAERAETCGSGNSTGYQIRLQSRLPRKQGSILYCTTGII 319
Query: 164 LREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQ 223
L+ SDP L + ILLDE HER L +D+LM V+K+++ R DLK+V+MSATL+A KF
Sbjct: 320 LQWLQSDPHLSSVSHILLDEIHERNLQSDVLMTVIKDLLSYRPDLKVVLMSATLNAEKFS 379
Query: 224 QYFDNAPLMNVPGRTHPV 241
+YF N P++++PG T PV
Sbjct: 380 EYFGNCPMIHIPGFTFPV 397
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 400 (145.9 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 74/137 (54%), Positives = 103/137 (75%)
Query: 110 VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS 169
+ TQPR+VAA+SVAQRV+EEM C LG +VGY +RF+DCSS +T +KYMTDG LL+ +
Sbjct: 2 IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILG 61
Query: 170 DPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRAD-----LKLVIMSATLDAGKFQQ 224
DP L + VI+LDEAHERTL TDIL G+LK++ ++++ LK+V+MSAT++ K
Sbjct: 62 DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSA 121
Query: 225 YFDNAPLMNVPGRTHPV 241
+F N P+ ++PGR +PV
Sbjct: 122 FFGNCPIFDIPGRLYPV 138
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 382 (139.5 bits), Expect = 2.1e-36, Sum P(2) = 2.1e-36
Identities = 78/196 (39%), Positives = 120/196 (61%)
Query: 53 ELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVAC 112
E R LP++ YR + + + Q +VL+GETGSGK+TQ+ Q+ + S ++++ C
Sbjct: 295 ECRRLEDGLPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLAD-SGVAASESIVC 353
Query: 113 TQPRRVAAMSVAQRVSEEMD-CQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDP 171
TQPR++AAM++ RV EE C V + F + + YMTD LL+ M D
Sbjct: 354 TQPRKIAAMTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDR 413
Query: 172 MLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPL 231
L +++DEAHER+L TD+L+ +L++++ +R DL+LVIMSAT DA + QY + +
Sbjct: 414 SLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGI 473
Query: 232 MNVPGRTHPVEIFYTP 247
++V GR PVEI Y+P
Sbjct: 474 LHVNGRNFPVEIVYSP 489
Score = 56 (24.8 bits), Expect = 2.1e-36, Sum P(2) = 2.1e-36
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 268 KKAADDAKMRFAHIDGDHLTLLNVY 292
K AD K++F + +GD TLL+VY
Sbjct: 768 KMKADRLKVQFCNDNGDLFTLLSVY 792
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 384 (140.2 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
Identities = 92/246 (37%), Positives = 147/246 (59%)
Query: 13 ITKKNREERLA-TVNASVSTSIASNLQVNPFTG-----YPYTPRYH---ELHRKRITLPV 63
+T K R E L T +V A N +++ +G P P E R +LPV
Sbjct: 135 VTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQIPVKRGESEFDSFRQSLPV 194
Query: 64 FEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAKAVACTQPRRVAAM 121
FE + E + ++ +N+ +++VGETGSGKTTQIPQ+ ++ + + + + CTQPRR+AA+
Sbjct: 195 FEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCR-IFCTQPRRLAAI 253
Query: 122 SVAQRVSEEMDCQLGQEVGYSIRFEDCS-SPKTVLKYMTDGMLLREGMS-DPMLENYQVI 179
+VA+RV+ E ++GQ +GY IR E SPKT+L + T+G+LLR M+ D L +
Sbjct: 254 AVAERVAAERRERIGQTIGYQIRLESRRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTHV 313
Query: 180 LLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTH 239
++DE HER +D L+ L++++++ LKL++ SA LD F +YF + P++ + GR
Sbjct: 314 IVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPF 373
Query: 240 PV-EIF 244
V E+F
Sbjct: 374 EVKEMF 379
Score = 49 (22.3 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 261 FTRPNEA--KKAADDAKMRF-AHIDGDHLTLLNVYHAFKQ 297
F P +A K+AA + RF A DH+ LL + A+++
Sbjct: 870 FVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQK 909
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 380 (138.8 bits), Expect = 4.2e-36, Sum P(2) = 4.2e-36
Identities = 82/198 (41%), Positives = 124/198 (62%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-Y-SKSVGA 107
RY E+ R LP + + E + ++ +Q V+ GETG GKTTQ+ Q+ ++ Y + G+
Sbjct: 190 RYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDDYIERGKGS 249
Query: 108 KA-VACTQPRRVAAMSVAQRVSEEM--DCQLGQEVGYSIRFEDCSSPKT-VLKYMTDGML 163
+ CTQPRR++A+SVA+RV+ E C G GY IR + K + Y T G++
Sbjct: 250 ACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGII 309
Query: 164 LREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQ 223
L+ SD L + I+LDE HER L +D+LM V+K+++ R DLK+++MSATL+A KF
Sbjct: 310 LQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFS 369
Query: 224 QYFDNAPLMNVPGRTHPV 241
+YF N P++++PG T PV
Sbjct: 370 EYFGNCPMIHIPGFTFPV 387
Score = 47 (21.6 bits), Expect = 4.2e-36, Sum P(2) = 4.2e-36
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 261 FTRPNEAKKAADDAKMRFAH-IDGDHLTLLNVYHAFKQ 297
F P +K AD + A DHLT++N + +++
Sbjct: 711 FVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEE 748
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 399 (145.5 bits), Expect = 4.6e-36, P = 4.6e-36
Identities = 86/224 (38%), Positives = 135/224 (60%)
Query: 58 RITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA---VACTQ 114
R LP +Y + + + +NQ I++VG TG GKTTQ+PQ ++ + S G + + CTQ
Sbjct: 150 RKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIICTQ 209
Query: 115 PRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSS-PKTVLKYMTDGMLLREGMSDPML 173
PRR++A+++A+ VS E LG VGY IR E + + + Y T G+LL++ SDP++
Sbjct: 210 PRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSDPLM 269
Query: 174 ENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMN 233
N V++LDE HER++ TD+LMG+LK ++ R DLK+++MSAT+ F YF+N P+
Sbjct: 270 HNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPMFR 329
Query: 234 VPGRTHPVEIFYTPEPPLGAGPWLPQCFTRPNEAKKAADDAKMR 277
+ G PV++ Y E L + Q F R K+ + +M+
Sbjct: 330 IEGVMFPVKMLYL-EDVLSKTNYEFQKF-RDRRPKRDPPERRMK 371
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 380 (138.8 bits), Expect = 6.8e-36, Sum P(2) = 6.8e-36
Identities = 82/198 (41%), Positives = 124/198 (62%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-Y-SKSVGA 107
RY E+ R LP + + E + ++ +Q V+ GETG GKTTQ+ Q+ ++ Y + G+
Sbjct: 310 RYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDDYIERGKGS 369
Query: 108 KA-VACTQPRRVAAMSVAQRVSEEM--DCQLGQEVGYSIRFEDCSSPKT-VLKYMTDGML 163
+ CTQPRR++A+SVA+RV+ E C G GY IR + K + Y T G++
Sbjct: 370 ACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGII 429
Query: 164 LREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQ 223
L+ SD L + I+LDE HER L +D+LM V+K+++ R DLK+++MSATL+A KF
Sbjct: 430 LQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFS 489
Query: 224 QYFDNAPLMNVPGRTHPV 241
+YF N P++++PG T PV
Sbjct: 490 EYFGNCPMIHIPGFTFPV 507
Score = 47 (21.6 bits), Expect = 6.8e-36, Sum P(2) = 6.8e-36
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 261 FTRPNEAKKAADDAKMRFAH-IDGDHLTLLNVYHAFKQ 297
F P +K AD + A DHLT++N + +++
Sbjct: 845 FVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEE 882
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 331 (121.6 bits), Expect = 9.2e-36, Sum P(3) = 9.2e-36
Identities = 69/166 (41%), Positives = 107/166 (64%)
Query: 47 YTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEY---SK 103
+ R E+ R LP+ E M + ++ +++ G+TG GKTTQ+PQ+ E SK
Sbjct: 227 HVSRPAEVEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSK 286
Query: 104 SVGAKA--VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDG 161
+++ + TQPRRVA ++ A+RV+ E+ +LG+EVG+ +R++ + +K+MTDG
Sbjct: 287 QFSSRSGIIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDG 346
Query: 162 MLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRAD 207
+LLRE +D +L Y VI+LDEAHER+L TDIL+G+L VIK R +
Sbjct: 347 ILLREIQNDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQE 392
Score = 75 (31.5 bits), Expect = 9.2e-36, Sum P(3) = 9.2e-36
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 204 QRADLKLVIMSATLDAGKF---QQYFDNAP-LMNVPGRTHPVEIFYT 246
Q LKL++MSATL F ++ F N P L+ VP R +PV I ++
Sbjct: 412 QITPLKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFS 458
Score = 45 (20.9 bits), Expect = 9.2e-36, Sum P(3) = 9.2e-36
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 263 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
R + K+ A+ RF++ D LT+ H+F+
Sbjct: 895 RKKDRKEKIKAARDRFSNPSSDALTVAYALHSFE 928
>POMBASE|SPCC895.09c [details] [associations]
symbol:ucp12 "ATP-dependent RNA helicase Ucp12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0043130
"ubiquitin binding" evidence=ISM] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
PomBase:SPCC895.09c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 PROSITE:PS50030
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043130 SUPFAM:SSF46934 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 PIR:T41647
RefSeq:NP_588050.1 ProteinModelPortal:O94536
EnsemblFungi:SPCC895.09c.1 GeneID:2539263 KEGG:spo:SPCC895.09c
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS NextBio:20800433
Uniprot:O94536
Length = 1327
Score = 398 (145.2 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 82/203 (40%), Positives = 133/203 (65%)
Query: 48 TPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGA 107
+P Y R+R LP +E R + M + +Q +V+ GETGSGK+TQ+ Q+ +++ S G
Sbjct: 564 SPSYQLKVREREKLPAWESRRKIMDAIQHSQVVVISGETGSGKSTQVVQFILDHYLSSGE 623
Query: 108 K---AVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLL 164
K V CTQPRR++A+S+A+RV+ E D +G+EVGYS+ E S +T+L++ T G+LL
Sbjct: 624 KDLQTVVCTQPRRISAISLAERVAFERDTTVGKEVGYSVHGEKSISKETLLEFCTTGLLL 683
Query: 165 REGMSDPM--LENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKF 222
R + L +++DE HER++ DIL+ +LK VI + +LK+++MSAT+++ F
Sbjct: 684 RRIQQHGLGFLSTLSCVVVDEVHERSIENDILLTLLKLVISRIPNLKVILMSATVNSDTF 743
Query: 223 QQYFDNAPLMNVPGRTHPVEIFY 245
+ YF NA +++ GRT P++ +Y
Sbjct: 744 KYYFGNAGHLHIHGRTFPIKDYY 766
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 386 (140.9 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 84/203 (41%), Positives = 128/203 (63%)
Query: 56 RKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAKA-VAC 112
+KR +LPVF+ + EF+ L +NQ +V+ ETG GK+TQIPQ+ +E S+ G++ + C
Sbjct: 620 KKRESLPVFKRKKEFLKCLQENQVVVITAETGCGKSTQIPQYILESFISQEKGSECNIVC 679
Query: 113 TQPRRVAAMSVAQRVSEEMDC-----QLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREG 167
TQPRR++A+ VA+RVS E +C +G VGY IR E S T L + T G+LLR
Sbjct: 680 TQPRRISAIGVAERVSYEWNCGTVENSIGGLVGYQIRNESKRSQSTRLLFCTTGILLRRI 739
Query: 168 MSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFD 227
+ + + I++DE HER+ D L+ +L+E+I +R DLK+++MSATL+A + YF
Sbjct: 740 LDVSNISDLSHIIIDEVHERSTDNDFLLIILREIISKRKDLKIILMSATLNAKQIANYFK 799
Query: 228 --NAPLMNVPGRTHPVEIFYTPE 248
+ + ++PG T PV+ Y E
Sbjct: 800 CTDDSIFSIPGFTFPVKNIYINE 822
Score = 42 (19.8 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 6/14 (42%), Positives = 12/14 (85%)
Query: 284 DHLTLLNVYHAFKQ 297
DH TL+N Y+++++
Sbjct: 1173 DHQTLINAYNSWRK 1186
>UNIPROTKB|D6RA70 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 PROSITE:PS50088
PROSITE:PS51061 PROSITE:PS51194 SMART:SM00248 SMART:SM00490
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC093208
EMBL:AC010389 HGNC:HGNC:24721 IPI:IPI00964960
ProteinModelPortal:D6RA70 SMR:D6RA70 Ensembl:ENST00000515883
UCSC:uc010jcf.2 HOGENOM:HOG000205632 ArrayExpress:D6RA70
Bgee:D6RA70 Uniprot:D6RA70
Length = 739
Score = 392 (143.0 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 92/245 (37%), Positives = 147/245 (60%)
Query: 13 ITKKNREERLA-TVNASVSTSIASNLQVNPFTG-----YPYTPRYH---ELHRKRITLPV 63
+T K R E L T +V A N +++ +G P P E R +LPV
Sbjct: 136 VTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQIPVKRGESEFDSFRQSLPV 195
Query: 64 FEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAKAVACTQPRRVAAM 121
FE + E + ++ +N+ +++VGETGSGKTTQIPQ+ ++ + + + + CTQPRR+AA+
Sbjct: 196 FEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCR-IFCTQPRRLAAI 254
Query: 122 SVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS-DPMLENYQVIL 180
+VA+RV+ E ++GQ +GY IR E SPKT+L + T+G+LLR M+ D L ++
Sbjct: 255 AVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTHVI 314
Query: 181 LDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHP 240
+DE HER +D L+ L++++++ LKL++ SA LD F +YF + P++ + GR
Sbjct: 315 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFE 374
Query: 241 V-EIF 244
V E+F
Sbjct: 375 VKEMF 379
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 395 (144.1 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 90/229 (39%), Positives = 139/229 (60%)
Query: 47 YTP--RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YS 102
Y P R E+ R+ LP+ M + +N +V+ GETGSGKTTQ+PQ+ E Y+
Sbjct: 226 YVPVDRSPEIQEARLKLPILAEEQVIMEAINENPIVVICGETGSGKTTQVPQFLYEAGYT 285
Query: 103 KSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGM 162
S G + T+PRRVAA+S++QRV++EM+ + V Y IR+E ++ +T +K+MTDG+
Sbjct: 286 SSNGI--IGITEPRRVAAVSMSQRVAKEMNLS-HRVVSYQIRYEGNTTDETQIKFMTDGV 342
Query: 163 LLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVI----KQRADLKLVIMSATLD 218
LL+E D +L Y+VI++DEAHER++ TDIL+G+L ++ K+ LKL+IMSATL
Sbjct: 343 LLKEVQKDFLLSKYKVIIIDEAHERSMYTDILIGLLSRIVPLREKKGLPLKLIIMSATLR 402
Query: 219 AGKFQQ----YFDNAPLMNVPGRTHPVEIFYTPEPPLGAGPWLPQCFTR 263
F + + P++ V R PV + + + PL + +CF +
Sbjct: 403 VEDFTENTRLFAGTPPVLQVDARQFPVTVHFNKKTPLD--DYSGECFRK 449
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 379 (138.5 bits), Expect = 2.0e-35, Sum P(2) = 2.0e-35
Identities = 90/275 (32%), Positives = 156/275 (56%)
Query: 8 VIDPYITKKNREER-LATVNASVSTSIASNLQVNP-FTGYPYTPRYHELHRKRITLPVFE 65
V+ K+N R + V A + N Q++ + TP + + + R+ LP++
Sbjct: 590 VLSDNFRKRNGTPRNRSPVRAGAKEAPGINEQLSQIWMEKASTPAFQYMVQSRMQLPIWT 649
Query: 66 YRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA-VACTQPRRVAAMSVA 124
++ E + L ++ +++ ETGSGK+TQIP + +E+ G + T+PRR++A+S+A
Sbjct: 650 FKNEILNTLNSHRALIICSETGSGKSTQIPSFILEHEMLSGRPCKIYVTEPRRISAISLA 709
Query: 125 QRVSEEM-----DCQLGQE-VGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQV 178
+RVSEE+ D + +G+++R E SP T L + T G+++R ++
Sbjct: 710 RRVSEELGESKNDVGTSRSLIGFAVRLESKVSPATRLVFATTGVVVRMLERPDDFQDITH 769
Query: 179 ILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRT 238
++LDE HER++ +D L+ VL+ ++++R DLKL++MSAT+DA +F Y P++N+PGRT
Sbjct: 770 VVLDEVHERSIDSDFLLIVLRRLMQKRQDLKLILMSATVDANRFSTYLGGVPVLNIPGRT 829
Query: 239 HPVEIFYTPEPPLGAGPWLPQCFTRPNEAKKAADD 273
PVE + E + L Q T NE+ A D+
Sbjct: 830 FPVETKFL-EDAIE----LTQYRTTENESNVADDE 859
Score = 47 (21.6 bits), Expect = 2.0e-35, Sum P(2) = 2.0e-35
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 262 TRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ 297
T + A+K A ++ F D D LT+ N Y A+K+
Sbjct: 1165 TMGSNAQKEA--VRLGFRRGDSDLLTVYNAYCAWKR 1198
>RGD|1563192 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001374
InterPro:IPR011545 Pfam:PF00270 Pfam:PF01424 PROSITE:PS51061
RGD:1563192 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00700000104393
GO:GO:0008026 OrthoDB:EOG4JWVCN IPI:IPI00367844 RefSeq:XP_225959.5
Ensembl:ENSRNOT00000060098 UCSC:RGD:1563192 NextBio:657385
Uniprot:D3ZIV8
Length = 394
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 87/232 (37%), Positives = 140/232 (60%)
Query: 13 ITKKNREERLA-TVNASVSTSIASNLQVNPFTG-----YPYTPRYH---ELHRKRITLPV 63
+T K R E L T +V A N +++ +G P P E R +LPV
Sbjct: 140 VTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQVPVKRGESEFDSFRQSLPV 199
Query: 64 FEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAKAVACTQPRRVAAM 121
FE + E + ++ +N+ +++VGETGSGKTTQIPQ+ ++ + + + + CTQPRR+AA+
Sbjct: 200 FEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCR-IFCTQPRRLAAI 258
Query: 122 SVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS-DPMLENYQVIL 180
+VA+RV+ E ++GQ +GY IR E SPKT+L + T+G+LLR M+ D L ++
Sbjct: 259 AVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTHVI 318
Query: 181 LDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLM 232
+DE HER +D L+ L++++++ LKL++ SA LD F +YF + P++
Sbjct: 319 VDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVI 370
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 378 (138.1 bits), Expect = 7.3e-35, Sum P(2) = 7.3e-35
Identities = 95/266 (35%), Positives = 146/266 (54%)
Query: 5 RLDVIDPYITKKNREERLATVNASVSTSIASNLQVNPF-TGYPYTPRYHELHRKRITLPV 63
++D D + + R R + A ++++ T Y R E+ R+ LP+
Sbjct: 341 KIDNPDADMVRAQRMPRKLKMREEDVEPTADDIEIKGRKTTYTIINRPPEIQESRLALPI 400
Query: 64 FEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YS--KSVGAKAVACTQPRRVA 119
M + N +++ G TGSGKTTQ+PQ+ E +S +S +A TQPRRVA
Sbjct: 401 VAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGMIAITQPRRVA 460
Query: 120 AMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVI 179
A+S+A+RVSEE+ +V Y IRF+ +P T +K+MTDG+LLRE SD +L Y +
Sbjct: 461 AVSIAKRVSEELT-GFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSSDFLLTAYSAV 519
Query: 180 LLDEAHERTLATDILMGVLKEVIKQRAD----------LKLVIMSATLDAGKFQQ---YF 226
++DEAHER++ TDIL+G+L +++ R + LKL+IMSATL F + F
Sbjct: 520 IVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLRVTDFSENKLLF 579
Query: 227 D-NAPLMNVPGRTHPVEIFY--TPEP 249
P++ + R +PV I + T +P
Sbjct: 580 SVPPPIIKIDARQYPVSIHFNRTTKP 605
Score = 40 (19.1 bits), Expect = 7.3e-35, Sum P(2) = 7.3e-35
Identities = 8/30 (26%), Positives = 19/30 (63%)
Query: 1 MSKRRLDVIDPYITKKNREERLATVNASVS 30
+S ++ +D YI K ++E +A++ A ++
Sbjct: 84 ISSKKKKRLDKYIENKLKKEEVASLIAKLA 113
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 388 (141.6 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 92/234 (39%), Positives = 139/234 (59%)
Query: 39 VNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWC 98
V P P R E+ +R+ LP+ M +A++ +++ GETGSGKTTQ+PQ+
Sbjct: 225 VKPAVFIPVN-RTPEMQEERLKLPILAEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFL 283
Query: 99 VEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEV-GYSIRFEDCSSPKTVLKY 157
E S + T+PRRVAA++++QRV++EM+ L Q V Y IR+E + +T +K+
Sbjct: 284 YEAGYSSDNSIIGITEPRRVAAVAMSQRVAKEMN--LSQRVVSYQIRYEGNVTEETRIKF 341
Query: 158 MTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRAD----LKLVIM 213
MTDG+LL+E D +L Y+V+L+DEAHER++ TDIL+G+L ++ RA LKL+IM
Sbjct: 342 MTDGVLLKEIQKDFLLLRYKVVLIDEAHERSVYTDILIGLLSRIVSLRAKRHLPLKLLIM 401
Query: 214 SATLDAGKF---QQYFDNAP-LMNVPGRTHPVEIFYTPEPPLGAGPWLPQCFTR 263
SATL F Q+ F P ++ V R PV + + PL + +CF +
Sbjct: 402 SATLRVEDFTQNQRLFPQPPPVIKVESRQFPVTVHFNKRTPLE--DYSGECFRK 453
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 383 (139.9 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 86/222 (38%), Positives = 135/222 (60%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
R E+ +R+ LP+ M +A++ +++ GETGSGKTTQ+PQ+ E S
Sbjct: 237 RTPEMQEERLKLPILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSEDSI 296
Query: 110 VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS 169
+ T+PRRVAA++++QRV++EM+ + V Y IR+E + +T +K+MTDG+LL+E
Sbjct: 297 IGVTEPRRVAAVAMSQRVAKEMNLS-HRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQK 355
Query: 170 DPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRAD----LKLVIMSATLDAGKF--- 222
D +L Y+V+++DEAHER++ TDIL+G+L ++ RA LKL+IMSATL F
Sbjct: 356 DFLLLKYKVVIIDEAHERSVYTDILLGLLSRIVALRAKRHLPLKLLIMSATLRVEDFTQN 415
Query: 223 QQYFDNAP-LMNVPGRTHPVEIFYTPEPPLGAGPWLPQCFTR 263
Q+ F P ++ V R PV + + PL + +CF +
Sbjct: 416 QRLFTTPPPVIKVESRQFPVTVHFNKRTPLD--DYSGECFRK 455
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 383 (139.9 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 84/222 (37%), Positives = 134/222 (60%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
R E+ +R+ LP+ M +A++ +++ GETGSGKTTQ+PQ+ E S
Sbjct: 239 RSPEMQEERLKLPILSEEQVIMEAVAEHPIVIICGETGSGKTTQVPQFLYEAGYSSDNSV 298
Query: 110 VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS 169
+ T+PRRVAA++++QRV++EM+ + V Y IR+E + +T +K+MTDG+LL+E
Sbjct: 299 IGVTEPRRVAAVAMSQRVAKEMNLS-PRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQK 357
Query: 170 DPMLENYQVILLDEAHERTLATDILMGVLKEVI----KQRADLKLVIMSATLDAGKFQQ- 224
D +L Y+V+++DEAHER++ TDIL+G+L ++ K+ LKL+IMSATL F Q
Sbjct: 358 DFLLLKYKVVIIDEAHERSVYTDILIGLLSRIVCLREKRHLPLKLLIMSATLRVEDFTQN 417
Query: 225 ---YFDNAPLMNVPGRTHPVEIFYTPEPPLGAGPWLPQCFTR 263
+ P++ V R PV + + PL + +CF +
Sbjct: 418 QRLFTQPPPVIKVESRQFPVTVHFNKRTPLE--DYSGECFRK 457
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 367 (134.2 bits), Expect = 3.9e-34, Sum P(2) = 3.9e-34
Identities = 72/202 (35%), Positives = 127/202 (62%)
Query: 51 YHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEY---SKSVGA 107
+ E+ R LP+ +R ++ + NQ +++ GETG GKTTQ+PQ+ +++ SK
Sbjct: 207 FREIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEAC 266
Query: 108 KAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLR-- 165
K + CTQPRR++A+SV+ R+S E +G+ VGY +R + ++ + + T+G+LLR
Sbjct: 267 KII-CTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVL 325
Query: 166 --EGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQ 223
+G++ + + +I+ DE HER +D ++ +L++++ L+L++MSATLDA +F
Sbjct: 326 IGKGVNSSVPDITHIIV-DEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFS 384
Query: 224 QYFDNAPLMNVPGRTHPVEIFY 245
+YF P++ VPG T+PV F+
Sbjct: 385 EYFGGCPVVRVPGFTYPVRTFF 406
Score = 48 (22.0 bits), Expect = 3.9e-34, Sum P(2) = 3.9e-34
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 264 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFK 296
P + KKAA AK A + GDH L AF+
Sbjct: 826 PGDRKKAAA-AKHELASLYGDHSDHLATVAAFQ 857
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 325 (119.5 bits), Expect = 4.0e-34, Sum P(2) = 4.0e-34
Identities = 58/116 (50%), Positives = 86/116 (74%)
Query: 139 VGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVL 198
VGY++RF+D +S T +K++TDGMLLRE +SD +L Y ++LDEAHERT+ TD+L GV+
Sbjct: 61 VGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVV 120
Query: 199 KEVIKQRADL-----KLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEP 249
K K+R +L K+++MSAT+D F QYF+ AP++ + GR HP+++FYT +P
Sbjct: 121 KAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQP 176
Score = 75 (31.5 bits), Expect = 4.0e-34, Sum P(2) = 4.0e-34
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 264 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQRFG 300
P ++ + +F +GDH+TLLN+Y FK G
Sbjct: 448 PPSRREEVQGVRKKFISSEGDHMTLLNIYRTFKNLGG 484
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 381 (139.2 bits), Expect = 4.2e-34, P = 4.2e-34
Identities = 87/223 (39%), Positives = 135/223 (60%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
R E+ +R+ LP+ M +A++ +++ GETGSGKTTQ+PQ+ E S
Sbjct: 28 RSPEMQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSI 87
Query: 110 VACTQPRRVAAMSVAQRVSEEMDCQLGQEV-GYSIRFEDCSSPKTVLKYMTDGMLLREGM 168
+ T+PRRVAA++++QRV++EM+ L Q V Y IR+E + +T +K+MTDG+LL+E
Sbjct: 88 IGVTEPRRVAAVAMSQRVAKEMN--LSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQ 145
Query: 169 SDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRAD----LKLVIMSATLDAGKFQQ 224
D +L Y+V+++DEAHER++ TDIL+G+L ++ RA LKL+IMSATL F Q
Sbjct: 146 KDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQ 205
Query: 225 ----YFDNAPLMNVPGRTHPVEIFYTPEPPLGAGPWLPQCFTR 263
+ P++ V R PV + + PL + +CF +
Sbjct: 206 NPRLFAKPPPVIKVESRQFPVTVHFNKRTPLE--DYSGECFRK 246
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 382 (139.5 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 76/204 (37%), Positives = 126/204 (61%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
R +L + + LP+ +R + L ++ +++ G+TG GK+TQ+PQ+ ++ G ++
Sbjct: 135 RIRKLRQTQRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDF----GYRS 190
Query: 110 VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS 169
+ACTQPRR+A +S+ +RV+ E+ G V + IRFE + T + ++T+G+LLR+
Sbjct: 191 IACTQPRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLLRQLAV 250
Query: 170 DPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYF--D 227
L+ Y ++LDE HER L D L+GV K +++ R LKL++MSAT++ F YF +
Sbjct: 251 AANLDQYDALILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSATINVELFHGYFGEE 310
Query: 228 NAPLMNVPGRTHPVEIFYTPEPPL 251
A L+ VPGR P+++ Y P P L
Sbjct: 311 GARLVQVPGRLFPIKLRYLPPPAL 334
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 383 (139.9 bits), Expect = 5.4e-34, P = 5.4e-34
Identities = 89/215 (41%), Positives = 130/215 (60%)
Query: 48 TPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEY---SKS 104
T +Y ++ + R LP+ E + + L + +V+ GETGSGKTTQ+PQ+ ++ S
Sbjct: 601 TQKYKDMLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGH 660
Query: 105 VGAKAVACTQPRRVAAMSVAQRVSEEMDCQL--GQE---VGYSIRFEDCSSPKTVLKYMT 159
G + CTQPRR+AA+SVAQRV++E C+ G + VGY +R E S KT L + T
Sbjct: 661 GGYCNIICTQPRRIAAISVAQRVADER-CESSPGLDDSLVGYQVRLESARSDKTRLLFCT 719
Query: 160 DGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVI-KQRAD-----LKLVIM 213
G+LLR+ D L + I++DE HER+L D L+ +LK +I KQ D LK+++M
Sbjct: 720 TGILLRKLAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILM 779
Query: 214 SATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPE 248
SAT+DA F +YF + P++ GRTHPV + E
Sbjct: 780 SATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEE 814
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 381 (139.2 bits), Expect = 6.0e-34, P = 6.0e-34
Identities = 87/223 (39%), Positives = 135/223 (60%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
R E+ +R+ LP+ M +A++ +++ GETGSGKTTQ+PQ+ E S
Sbjct: 241 RSPEMQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSI 300
Query: 110 VACTQPRRVAAMSVAQRVSEEMDCQLGQEV-GYSIRFEDCSSPKTVLKYMTDGMLLREGM 168
+ T+PRRVAA++++QRV++EM+ L Q V Y IR+E + +T +K+MTDG+LL+E
Sbjct: 301 IGVTEPRRVAAVAMSQRVAKEMN--LSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQ 358
Query: 169 SDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRAD----LKLVIMSATLDAGKFQQ 224
D +L Y+V+++DEAHER++ TDIL+G+L ++ RA LKL+IMSATL F Q
Sbjct: 359 KDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQ 418
Query: 225 ----YFDNAPLMNVPGRTHPVEIFYTPEPPLGAGPWLPQCFTR 263
+ P++ V R PV + + PL + +CF +
Sbjct: 419 NPRLFAKPPPVIKVESRQFPVTVHFNKRTPLE--DYSGECFRK 459
>UNIPROTKB|J3KTK0 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 Ensembl:ENST00000584385 Uniprot:J3KTK0
Length = 173
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 69/129 (53%), Positives = 96/129 (74%)
Query: 110 VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS 169
+ TQPR+VAA+SVAQRV+EEM C LG +VGY +RF+DCSS +T +KYMTDG LL+ +
Sbjct: 45 IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILG 104
Query: 170 DPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRAD-----LKLVIMSATLDAGKFQQ 224
DP L + VI+LDEAHERTL TDIL G+LK++ ++++ LK+V+MSAT++ K
Sbjct: 105 DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSA 164
Query: 225 YFDNAPLMN 233
+F N P+ +
Sbjct: 165 FFGNCPIFD 173
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 376 (137.4 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 82/197 (41%), Positives = 129/197 (65%)
Query: 51 YHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAK 108
Y E+ + R LP + R E + L++ N+ +V+ GETG GKTTQ+ Q+ ++ + G+
Sbjct: 210 YIEMLKFRKKLPSYGMREELVRLISANRVLVISGETGCGKTTQVTQFILDDFIQRGQGSL 269
Query: 109 A-VACTQPRRVAAMSVAQRVSEEMDCQLGQ--EVGYSIRFEDCSSPKT-VLKYMTDGMLL 164
V CTQPRR++A+SVA+RV+ E +G+ GY IR + K L Y T G++L
Sbjct: 270 CRVVCTQPRRISAISVAERVAVERAEPVGEGKSCGYQIRLQSRLPRKQGSLLYCTTGVIL 329
Query: 165 REGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQ 224
+ SDP L + ++LDE HER++ +DIL+ ++K+++ R DLK+V+MSATL+A KF +
Sbjct: 330 QWLHSDPYLSSITHLVLDEIHERSVQSDILITIVKDLLTARDDLKVVLMSATLNAEKFSK 389
Query: 225 YFDNAPLMNVPGRTHPV 241
YF+N P++++PG T PV
Sbjct: 390 YFNNCPMIHIPGYTFPV 406
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 360 (131.8 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 76/195 (38%), Positives = 124/195 (63%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCV-EYSKSVGAKAVAC--- 112
+R LPV ++ + M+ + N +++ G TG GKTTQ+PQ+ + E+ K G +A C
Sbjct: 391 ERSQLPVKNFQEQIMSTIYNNPVVIIRGATGCGKTTQVPQYILDEFIK--GGRASDCNIV 448
Query: 113 -TQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFED-CSSPKTVLKYMTDGMLLREGMSD 170
TQPRR++A+SVA+RVS E +G+ GYS+RFE P + + T G+LLR+ S
Sbjct: 449 VTQPRRISAVSVAERVSFERGEDVGKSCGYSVRFESFLPRPHASILFCTVGVLLRKLESG 508
Query: 171 PMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAP 230
+ +++DE HER + TD L+ VL++V++ D+++++MSAT+D F++YF N P
Sbjct: 509 --IRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPDVRVILMSATIDTTMFKEYFFNCP 566
Query: 231 LMNVPGRTHPVEIFY 245
++ V GR HPV+ ++
Sbjct: 567 VIEVHGRAHPVQEYF 581
Score = 46 (21.3 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 260 CFTRP--NEAKKAADDAKMRFAHID-GDHLTLLNVYHAFKQ-RFG 300
CF P NE K+ FA DH+ LL+V+ A+ + R G
Sbjct: 894 CFPEPFINEGKRLGF-VHRNFAGSRFSDHVALLSVFQAWDEVRVG 937
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 377 (137.8 bits), Expect = 1.9e-33, P = 1.9e-33
Identities = 94/223 (42%), Positives = 127/223 (56%)
Query: 45 YPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKS 104
Y R E+ + RI LPVF + M + N +++ GETGSGKTTQ+PQ+ Y
Sbjct: 375 YVEVSRSDEIQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFL--YEAG 432
Query: 105 VGAK-------AVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKY 157
GA+ V TQPRRVAA+S+A+RV+ E+ G +VGY IRF+ + T +K+
Sbjct: 433 FGAEDSPDYPGMVGITQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKF 491
Query: 158 MTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADL--------- 208
MTDG+LLRE M D L Y I++DEAHER + TDIL+G+L ++ RA L
Sbjct: 492 MTDGVLLREMMHDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHK 551
Query: 209 --KLVIMSATLDAGKFQQ---YFDNAP-LMNVPGRTHPVEIFY 245
KL+IMSATL F + F AP ++ V R PV I +
Sbjct: 552 KLKLIIMSATLRVSDFSENKTLFPIAPPVLQVDARQFPVSIHF 594
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 357 (130.7 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 73/199 (36%), Positives = 122/199 (61%)
Query: 53 ELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEY---SKSVGAKA 109
E+ + R LP+ ++ + + NQ I++ GETG GKTTQ+PQ+ +++ SK K
Sbjct: 179 EITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKI 238
Query: 110 VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLRE--G 167
V CTQPRR++AMSV++R+S E +G+ +GY +R + + + + T+G+LLR G
Sbjct: 239 V-CTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVG 297
Query: 168 M-SDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYF 226
S + + I++DE HER +D ++ ++++++ L+L++MSATLDA +F YF
Sbjct: 298 KGSVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYF 357
Query: 227 DNAPLMNVPGRTHPVEIFY 245
P++ VPG T+PV Y
Sbjct: 358 GGCPVVRVPGFTYPVRTLY 376
Score = 49 (22.3 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 264 PNEAKKAADDAKMRFAHI---DGDHLTLLNVYHAFKQRFG 300
P E +KAA AK+ A + D DHL ++ + +K G
Sbjct: 802 PVERQKAAA-AKLELASLCGGDSDHLAVVAAFECWKNAKG 840
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 362 (132.5 bits), Expect = 2.3e-33, Sum P(2) = 2.3e-33
Identities = 77/206 (37%), Positives = 128/206 (62%)
Query: 47 YTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKS 104
++ + E+ +R LP F + MT + Q ++ GETGSGK+TQ+ Q+ ++ YSK
Sbjct: 559 HSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIMDDLYSKG 618
Query: 105 VGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLL 164
+ CTQPRR++A+S+A R+S+E ++G E GY IR E+ +S T + + T G+LL
Sbjct: 619 DFTTKIICTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSNTRITFATTGVLL 678
Query: 165 R---EGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGK 221
R + +L+N IL+DE HER++ D L+ +LK++IK LK++++SAT+
Sbjct: 679 RMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILLSATISVDT 738
Query: 222 FQQYFDNAPL--MNVPGRTHPVEIFY 245
F +F+ PL +++ GRT+P++ FY
Sbjct: 739 FINFFEK-PLTPLHIEGRTYPIQDFY 763
Score = 44 (20.5 bits), Expect = 2.3e-33, Sum P(2) = 2.3e-33
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAF 295
F E + + +F + GD +++ N Y+A+
Sbjct: 1059 FINSYEQRDKLKQIQKKFGNGQGDFISMANAYNAY 1093
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 362 (132.5 bits), Expect = 2.3e-33, Sum P(2) = 2.3e-33
Identities = 77/206 (37%), Positives = 128/206 (62%)
Query: 47 YTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKS 104
++ + E+ +R LP F + MT + Q ++ GETGSGK+TQ+ Q+ ++ YSK
Sbjct: 559 HSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIMDDLYSKG 618
Query: 105 VGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLL 164
+ CTQPRR++A+S+A R+S+E ++G E GY IR E+ +S T + + T G+LL
Sbjct: 619 DFTTKIICTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSNTRITFATTGVLL 678
Query: 165 R---EGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGK 221
R + +L+N IL+DE HER++ D L+ +LK++IK LK++++SAT+
Sbjct: 679 RMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILLSATISVDT 738
Query: 222 FQQYFDNAPL--MNVPGRTHPVEIFY 245
F +F+ PL +++ GRT+P++ FY
Sbjct: 739 FINFFEK-PLTPLHIEGRTYPIQDFY 763
Score = 44 (20.5 bits), Expect = 2.3e-33, Sum P(2) = 2.3e-33
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 261 FTRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAF 295
F E + + +F + GD +++ N Y+A+
Sbjct: 1059 FINSYEQRDKLKQIQKKFGNGQGDFISMANAYNAY 1093
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 374 (136.7 bits), Expect = 3.5e-33, P = 3.5e-33
Identities = 93/214 (43%), Positives = 126/214 (58%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSK--SV 105
R E+ R+ LPV M + N +V+ G TGSGKTTQIPQ+ E Y S
Sbjct: 346 RSPEIQSARLALPVVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQFLFEAGYGSPDSP 405
Query: 106 GAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLR 165
+ TQPRRVAA+S+++RV+EE+ Q+VGY IRFE + T +K+MTDG+LLR
Sbjct: 406 TPGMIGITQPRRVAAVSMSKRVAEELGDH-SQKVGYQIRFEGTVNKDTAVKFMTDGVLLR 464
Query: 166 EGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRAD----------LKLVIMSA 215
E D L Y I++DEAHER++ TDIL+G+L +IK RA+ LKLVIMSA
Sbjct: 465 EVAQDLALRKYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMAQEDPTVKPLKLVIMSA 524
Query: 216 TL---DAGKFQQYFDNAP-LMNVPGRTHPVEIFY 245
TL D + + F P ++ V GR +PV + +
Sbjct: 525 TLRIEDLTENKNLFATPPPVLEVEGRQYPVTLHF 558
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 371 (135.7 bits), Expect = 7.0e-33, P = 7.0e-33
Identities = 83/210 (39%), Positives = 125/210 (59%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
R E+ R+ LPV M + ++C+VL GETGSGKTTQ+PQ+ E +
Sbjct: 241 RLPEIQEARLRLPVLAEEQIIMEAVKDHECVVLCGETGSGKTTQVPQFLYEAGFASSGGI 300
Query: 110 VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS 169
+ T+PRRVAA+S++ RV+ EM+ G V Y IR+E + T +K MTDG+LL+E
Sbjct: 301 IGVTEPRRVAAISMSHRVATEMNLSSGV-VSYQIRYEGNVTENTKIKVMTDGVLLKEIQR 359
Query: 170 DPMLENYQVILLDEAHERTLATDILMGVLKEVI----KQRADLKLVIMSATLDAGKF--- 222
D +L+ Y VI++DEAHER++ TDIL+G+L ++ K+ +KL+IMSATL F
Sbjct: 360 DFLLQKYSVIIIDEAHERSVYTDILIGLLSRIVPLRNKKGLPMKLIIMSATLRVEDFTEN 419
Query: 223 QQYFDNAP-LMNVPGRTHPVEIFYTPEPPL 251
++ F + P ++ V R V + + P+
Sbjct: 420 KRLFSSPPPVIKVEARQFAVTVHFNKRTPM 449
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 351 (128.6 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 73/201 (36%), Positives = 127/201 (63%)
Query: 52 HELH---RKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVG 106
H+L ++R LPV ++ +E + ++QN +++ G TG GKTTQ+PQ+ ++
Sbjct: 376 HDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRA 435
Query: 107 AKA-VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDC-SSPKTVLKYMTDGMLL 164
A+ + TQPRR++A+SVA+RV+ E + G+ GYS+RFE P + + T G+LL
Sbjct: 436 AECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLL 495
Query: 165 REGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQ 224
R+ + + +++DE HER + TD L+ VL++V++ ++++V+MSAT+D F +
Sbjct: 496 RK--LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCE 553
Query: 225 YFDNAPLMNVPGRTHPVEIFY 245
YF N P++ V GRT+PV+ ++
Sbjct: 554 YFFNCPIIEVYGRTYPVQEYF 574
Score = 46 (21.3 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 260 CFTRP--NEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ-RFG 300
CF P NE K+ + + DH+ LL+V+ A+ R G
Sbjct: 888 CFPEPFINEGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMG 931
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 351 (128.6 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 73/201 (36%), Positives = 127/201 (63%)
Query: 52 HELH---RKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVG 106
H+L ++R LPV ++ +E + ++QN +++ G TG GKTTQ+PQ+ ++
Sbjct: 376 HDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRA 435
Query: 107 AKA-VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDC-SSPKTVLKYMTDGMLL 164
A+ + TQPRR++A+SVA+RV+ E + G+ GYS+RFE P + + T G+LL
Sbjct: 436 AECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLL 495
Query: 165 REGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQ 224
R+ + + +++DE HER + TD L+ VL++V++ ++++V+MSAT+D F +
Sbjct: 496 RK--LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCE 553
Query: 225 YFDNAPLMNVPGRTHPVEIFY 245
YF N P++ V GRT+PV+ ++
Sbjct: 554 YFFNCPIIEVYGRTYPVQEYF 574
Score = 46 (21.3 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 260 CFTRP--NEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ-RFG 300
CF P NE K+ + + DH+ LL+V+ A+ R G
Sbjct: 888 CFPEPFINEGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMG 931
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 366 (133.9 bits), Expect = 2.7e-32, P = 2.7e-32
Identities = 80/194 (41%), Positives = 122/194 (62%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYS--KSVGAKA-VACTQPRR 117
LPV ++ ++ + QN +V+ G+TG GKTT+IPQ +E+ + GA+ V TQPRR
Sbjct: 478 LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRR 537
Query: 118 VAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKT---VLKYMTDGMLLREGMSDPMLE 174
++A+SVAQRV++E+ + + VGY +R E S P L + T G+LLR+ +P LE
Sbjct: 538 ISAISVAQRVAQELGPNMRKNVGYQVRLE--SKPPARGGALLFCTVGILLRKLQGNPSLE 595
Query: 175 NYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNV 234
+++DE HER + TD L+ +LK + K DL+LV+MSAT D +F YF + P++ V
Sbjct: 596 GVSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGDCPVVKV 655
Query: 235 PGRTHPVEIFYTPE 248
PG +PV+ +Y E
Sbjct: 656 PGFMYPVKEYYLEE 669
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 354 (129.7 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 72/195 (36%), Positives = 124/195 (63%)
Query: 56 RKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQW----CVEYSKSVGAKAVA 111
++R LPV ++ +E + ++QN +++ G TG GKTTQ+PQ+ C++ ++ V
Sbjct: 380 QERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRAAECNIVV 439
Query: 112 CTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDC-SSPKTVLKYMTDGMLLREGMSD 170
TQPRR++A+SVA+RV+ E + G+ GYS+RFE P + + T G+LLR+ +
Sbjct: 440 -TQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK--LE 496
Query: 171 PMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAP 230
+ +++DE HER + TD L+ VL++V++ ++++V+MSAT+D F +YF N P
Sbjct: 497 AGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCP 556
Query: 231 LMNVPGRTHPVEIFY 245
++ V GRT PV+ ++
Sbjct: 557 IIEVYGRTFPVQEYF 571
Score = 41 (19.5 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 260 CFTRP--NEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ-RFG 300
CF P +E K+ + + DH+ LL+V+ A+ R G
Sbjct: 885 CFPEPFISEGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMG 928
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 354 (129.7 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 72/195 (36%), Positives = 124/195 (63%)
Query: 56 RKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQW----CVEYSKSVGAKAVA 111
++R LPV ++ +E + ++QN +++ G TG GKTTQ+PQ+ C++ ++ V
Sbjct: 380 QERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRAAECNIVV 439
Query: 112 CTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDC-SSPKTVLKYMTDGMLLREGMSD 170
TQPRR++A+SVA+RV+ E + G+ GYS+RFE P + + T G+LLR+ +
Sbjct: 440 -TQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK--LE 496
Query: 171 PMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAP 230
+ +++DE HER + TD L+ VL++V++ ++++V+MSAT+D F +YF N P
Sbjct: 497 AGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCP 556
Query: 231 LMNVPGRTHPVEIFY 245
++ V GRT PV+ ++
Sbjct: 557 IIEVYGRTFPVQEYF 571
Score = 41 (19.5 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 260 CFTRP--NEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ-RFG 300
CF P +E K+ + + DH+ LL+V+ A+ R G
Sbjct: 885 CFPEPFISEGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMG 928
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 366 (133.9 bits), Expect = 2.8e-32, P = 2.8e-32
Identities = 91/221 (41%), Positives = 124/221 (56%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYS-----KS 104
R + ++R LPVF M + + CI+L GETGSGKTTQ+PQ+ E
Sbjct: 432 RTDSIQQQRALLPVFAEEHRIMEAVYHHDCIILCGETGSGKTTQVPQFLYEAGFGNLLHD 491
Query: 105 VGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPK-----TVLKYMT 159
+ + TQPRRVAA+S+A+RV E+ G VGY IRF+ + T LK+MT
Sbjct: 492 LYPGMIGVTQPRRVAAVSMAERVGSELGDH-GHRVGYQIRFDTTIKNEGKENGTALKFMT 550
Query: 160 DGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRAD-----------L 208
DG+LLRE M+D +L Y I++DEAHER + TDIL+G+L V+K R L
Sbjct: 551 DGVLLREMMTDFLLAKYSAIIIDEAHERNINTDILIGMLTRVVKLRRKYHKENPQLYKPL 610
Query: 209 KLVIMSATLDAGKFQQ----YFDNAPLMNVPGRTHPVEIFY 245
KL+IMSATL F + + P++NV R +PV I +
Sbjct: 611 KLIIMSATLRVSDFSENPALFKTPPPIINVQARQYPVSIHF 651
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 365 (133.5 bits), Expect = 3.4e-32, P = 3.4e-32
Identities = 80/194 (41%), Positives = 121/194 (62%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYS--KSVGAKA-VACTQPRR 117
LPV ++ ++ + QN +V+ G+TG GKTT+IPQ +E+ + GA+ V TQPRR
Sbjct: 478 LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRR 537
Query: 118 VAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKT---VLKYMTDGMLLREGMSDPMLE 174
++A+SVAQRV++E+ + + VGY +R E S P L + T G+LLR+ +P LE
Sbjct: 538 ISAISVAQRVAQELGPNMRKNVGYQVRLE--SKPPARGGALLFCTVGILLRKLQGNPSLE 595
Query: 175 NYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNV 234
+++DE HER + TD L+ +LK + K DL+LV+MSAT D +F YF P++ V
Sbjct: 596 GVSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGGCPVVKV 655
Query: 235 PGRTHPVEIFYTPE 248
PG +PV+ +Y E
Sbjct: 656 PGFMYPVKEYYLEE 669
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 350 (128.3 bits), Expect = 7.0e-32, Sum P(2) = 7.0e-32
Identities = 71/194 (36%), Positives = 124/194 (63%)
Query: 56 RKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAKA-VAC 112
++R LPV ++ +E + ++QN +++ G TG GKTTQ+PQ+ ++ A+ +
Sbjct: 384 QERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVV 443
Query: 113 TQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDC-SSPKTVLKYMTDGMLLREGMSDP 171
TQPRR++A+SVA+RV+ E + G+ GYS+RFE P + + T G+LLR+ +
Sbjct: 444 TQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESVLPRPYASIMFCTVGVLLRK--LEA 501
Query: 172 MLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPL 231
+ +++DE HER + TD L+ VL++V++ ++++V+MSAT+D F +YF N P+
Sbjct: 502 GIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPI 561
Query: 232 MNVPGRTHPVEIFY 245
+ V GRT+PV+ ++
Sbjct: 562 IEVYGRTYPVQEYF 575
Score = 41 (19.5 bits), Expect = 7.0e-32, Sum P(2) = 7.0e-32
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 260 CFTRP--NEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ-RFG 300
CF P +E K+ + + DH+ LL+V+ A+ R G
Sbjct: 889 CFPEPFISEGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMG 932
>UNIPROTKB|C3XYZ4 [details] [associations]
symbol:BRAFLDRAFT_65715 "Putative uncharacterized protein"
species:7739 "Branchiostoma floridae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0009566 "fertilization"
evidence=ISS] [GO:0034587 "piRNA metabolic process" evidence=ISS]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00028 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0005634 GO:GO:0008270 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0007140 Pfam:PF00567 GO:GO:0043046
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GO:GO:0008026 GO:GO:0071547 OMA:INDWFTI EMBL:GG666475
RefSeq:XP_002610548.1 GeneID:7220579 KEGG:bfo:BRAFLDRAFT_65715
eggNOG:NOG270748 Uniprot:C3XYZ4
Length = 1475
Score = 363 (132.8 bits), Expect = 7.4e-32, P = 7.4e-32
Identities = 89/268 (33%), Positives = 149/268 (55%)
Query: 1 MSKRRLDVIDPYITKKNREERLATVNASVSTSIASNLQVNPFTGYPYTPRYHELHRKRIT 60
M++ L+ ID ++ N + L ++N+ L+ +P Y+ H T
Sbjct: 83 MAQDDLESIDERMSDLNALD-LDSINSLAGDLGRQTLEEDPLRSVNIYRNYNFNHTYNPT 141
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-YSKSVGAKAVACTQPRRVA 119
LP+ Y+ E +T + N V+ G+TGSGKTTQ+PQ+ ++ Y+++ + TQPRR+A
Sbjct: 142 LPITGYQEEIITTVESNSVTVIQGDTGSGKTTQVPQYILDHYARANRWCNIVVTQPRRIA 201
Query: 120 AMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVI 179
A+S+A+RV++E +LG VGY + + S T L ++T G+LL++ ++ + + +
Sbjct: 202 AISIARRVADERGWRLGGIVGYQVGMDKQQSEDTRLSFVTTGVLLQKLINTKNMNQFTHV 261
Query: 180 LLDEAHERTLATDILMGVLKEVIKQRA-DLKLVIMSATLDAGKFQQYFD--------NAP 230
+LDE HER TD + V +++++ + +K+V+MSATLD+ F YF AP
Sbjct: 262 ILDEVHERDQETDFALLVARKLLRSNSRHVKVVLMSATLDSSMFAGYFSIPVRGELAPAP 321
Query: 231 LMNVPGRTHPVEIFYTPE-PPLGAGPWL 257
++ V GR PV FY + PLG P L
Sbjct: 322 VVTVEGRLFPVTEFYVEDLAPLGPLPVL 349
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 349 (127.9 bits), Expect = 8.9e-32, Sum P(2) = 8.9e-32
Identities = 71/194 (36%), Positives = 124/194 (63%)
Query: 56 RKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE--YSKSVGAKA-VAC 112
++R LPV ++ +E + ++QN +++ G TG GKTTQ+PQ+ ++ A+ +
Sbjct: 379 QERELLPVKKFESEILEAISQNPVVIVRGATGCGKTTQVPQFILDDFIQNDRAAECNIVV 438
Query: 113 TQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDC-SSPKTVLKYMTDGMLLREGMSDP 171
TQPRR++A+SVA+RV+ E + G+ GYS+RFE P + + T G+LLR+ +
Sbjct: 439 TQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK--LEA 496
Query: 172 MLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPL 231
+ +++DE HER + TD L+ VL++V++ ++++V+MSAT+D F +YF N P+
Sbjct: 497 GIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPI 556
Query: 232 MNVPGRTHPVEIFY 245
+ V GRT+PV+ ++
Sbjct: 557 IEVYGRTYPVQEYF 570
Score = 41 (19.5 bits), Expect = 8.9e-32, Sum P(2) = 8.9e-32
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 260 CFTRP--NEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ-RFG 300
CF P +E K+ + + DH+ LL+V+ A+ R G
Sbjct: 880 CFPEPFISEGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMG 923
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 361 (132.1 bits), Expect = 9.9e-32, P = 9.9e-32
Identities = 83/230 (36%), Positives = 134/230 (58%)
Query: 51 YHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-Y--SKSVGA 107
Y + R LP+ R+E +T + N +++ G TG GKTTQI Q+ ++ Y S G
Sbjct: 374 YRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGGY 433
Query: 108 KAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDC-SSPKTVLKYMTDGMLLRE 166
+ TQPRR++A+SVA+RV+ E QLG VGYS+RFE P + + T G+LLR+
Sbjct: 434 ANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRK 493
Query: 167 GMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYF 226
+ L I++DE HER + +D L+ +L++++ DL +++MSAT+D KF +YF
Sbjct: 494 --LEAGLRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYF 551
Query: 227 DNAPLMNVPGRTHPVEIFYTPEPPLGAGPWLPQCFTRPNEAKKAADDAKM 276
P++ VPGR PV+ F+ E + ++P +R + K+ D+ ++
Sbjct: 552 GICPVLEVPGRAFPVQQFFL-EDIIQMTDFVPSAESR-RKRKEVEDEEQL 599
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 348 (127.6 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 81/191 (42%), Positives = 119/191 (62%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-Y-SKSVGAKA-VACTQPRR 117
LPV +R + + Q+ +V+ G+TG GKTT+IPQ +E Y S+ GA+ V TQPRR
Sbjct: 434 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVSEGRGARCNVIITQPRR 493
Query: 118 VAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKT---VLKYMTDGMLLREGMSDPMLE 174
++A+SVAQRVS E+ L + VG+ +R E S P L + T G+LLR+ S+P LE
Sbjct: 494 ISAVSVAQRVSHELGPSLRRNVGFQVRLE--SKPPARGGALLFCTVGILLRKLQSNPSLE 551
Query: 175 NYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNV 234
+++DE HER + TD L+ +LK + + L+LV+MSAT D +F +YF P++ V
Sbjct: 552 GVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKV 611
Query: 235 PGRTHPVEIFY 245
PG +PV+ Y
Sbjct: 612 PGFMYPVKEHY 622
Score = 39 (18.8 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 40 NPFTGYPYTPRYHELHRKRITLPVFE 65
+P TG PY P E R++ + E
Sbjct: 395 DPITGKPYVP-LSEAEEVRLSQNLLE 419
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 348 (127.6 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 81/191 (42%), Positives = 119/191 (62%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-Y-SKSVGAKA-VACTQPRR 117
LPV +R + + Q+ +V+ G+TG GKTT+IPQ +E Y S+ GA+ V TQPRR
Sbjct: 462 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVSEGRGARCNVIITQPRR 521
Query: 118 VAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKT---VLKYMTDGMLLREGMSDPMLE 174
++A+SVAQRVS E+ L + VG+ +R E S P L + T G+LLR+ S+P LE
Sbjct: 522 ISAVSVAQRVSHELGPSLRRNVGFQVRLE--SKPPARGGALLFCTVGILLRKLQSNPSLE 579
Query: 175 NYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNV 234
+++DE HER + TD L+ +LK + + L+LV+MSAT D +F +YF P++ V
Sbjct: 580 GVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKV 639
Query: 235 PGRTHPVEIFY 245
PG +PV+ Y
Sbjct: 640 PGFMYPVKEHY 650
Score = 39 (18.8 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 40 NPFTGYPYTPRYHELHRKRITLPVFE 65
+P TG PY P E R++ + E
Sbjct: 423 DPITGKPYVP-LSEAEEVRLSQNLLE 447
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 348 (127.6 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 81/191 (42%), Positives = 119/191 (62%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-Y-SKSVGAKA-VACTQPRR 117
LPV +R + + Q+ +V+ G+TG GKTT+IPQ +E Y S+ GA+ V TQPRR
Sbjct: 462 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVSEGRGARCNVIITQPRR 521
Query: 118 VAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKT---VLKYMTDGMLLREGMSDPMLE 174
++A+SVAQRVS E+ L + VG+ +R E S P L + T G+LLR+ S+P LE
Sbjct: 522 ISAVSVAQRVSHELGPSLRRNVGFQVRLE--SKPPARGGALLFCTVGILLRKLQSNPSLE 579
Query: 175 NYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNV 234
+++DE HER + TD L+ +LK + + L+LV+MSAT D +F +YF P++ V
Sbjct: 580 GVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKV 639
Query: 235 PGRTHPVEIFY 245
PG +PV+ Y
Sbjct: 640 PGFMYPVKEHY 650
Score = 39 (18.8 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 40 NPFTGYPYTPRYHELHRKRITLPVFE 65
+P TG PY P E R++ + E
Sbjct: 423 DPITGKPYVP-LSEAEEVRLSQNLLE 447
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 349 (127.9 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 81/229 (35%), Positives = 135/229 (58%)
Query: 49 PRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCV-EYSKSVGA 107
P ++ R +LPV ++ E M + + +++ G TG GKTTQ+PQ+ + EY ++ A
Sbjct: 378 PNIKQVLIDRESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDEYIRNDRA 437
Query: 108 KA--VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDC-SSPKTVLKYMTDGMLL 164
+ TQPRR++A+SVA+RV+ E ++G+ GYS+RFE P + + T G+LL
Sbjct: 438 AQCNIVVTQPRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGVLL 497
Query: 165 REGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQ 224
R+ S + +++DE HER + TD L+ VL++VI+ ++++++MSAT+D F +
Sbjct: 498 RKLESG--IRGISHVIVDEIHERDINTDFLLVVLRDVIQAFPEIRVILMSATIDTSMFCE 555
Query: 225 YFDNAPLMNVPGRTHPVEIFYTPEPPLGAGPWLPQCFTRPNEAKKAADD 273
YF N P++ V GRT PV+ +Y E + ++P P + KK D
Sbjct: 556 YFFNCPIIEVFGRTFPVQEYYL-EDCIQMTQFIPP----PRDKKKKDKD 599
Score = 38 (18.4 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 260 CFTRP--NEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ-RFG 300
CF P +E ++ + + DH+ LL+V+ A+ R G
Sbjct: 890 CFPEPFISEGRRLGYVHRNFAGNRFSDHVALLSVFQAWDDARMG 933
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 346 (126.9 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 80/191 (41%), Positives = 119/191 (62%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-Y-SKSVGAKA-VACTQPRR 117
LPV +R + + Q+ +V+ G+TG GKTT+IPQ +E Y ++ GA+ V TQPRR
Sbjct: 460 LPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 519
Query: 118 VAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKT---VLKYMTDGMLLREGMSDPMLE 174
++A+SVAQRVS E+ L + VG+ +R E S P L + T G+LLR+ S+P LE
Sbjct: 520 ISAVSVAQRVSHELGPSLRRNVGFQVRLE--SKPPARGGALLFCTVGILLRKLQSNPSLE 577
Query: 175 NYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNV 234
+++DE HER + TD L+ +LK + + L+LV+MSAT D +F +YF P++ V
Sbjct: 578 GVSHVVVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKV 637
Query: 235 PGRTHPVEIFY 245
PG +PV+ Y
Sbjct: 638 PGFMYPVKEHY 648
Score = 40 (19.1 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 40 NPFTGYPYTPRYHELHRKRITLPVFE 65
+P TG PY P E R++ + E
Sbjct: 421 DPITGKPYVP-LSEAEELRLSQSLLE 445
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 347 (127.2 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 80/191 (41%), Positives = 119/191 (62%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-Y-SKSVGAKA-VACTQPRR 117
LPV +R + + Q+ +V+ G+TG GKTT+IPQ +E Y ++ GA+ V TQPRR
Sbjct: 462 LPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 521
Query: 118 VAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKT---VLKYMTDGMLLREGMSDPMLE 174
++A+SVAQRVS E+ L + VG+ +R E S P L + T G+LLR+ S+P LE
Sbjct: 522 ISAVSVAQRVSHELGPSLRRNVGFQVRLE--SKPPARGGALLFCTVGILLRKLQSNPSLE 579
Query: 175 NYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNV 234
+++DE HER + TD L+ +LK + + L+LV+MSAT D +F +YF P++ V
Sbjct: 580 GVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKV 639
Query: 235 PGRTHPVEIFY 245
PG +PV+ Y
Sbjct: 640 PGFMYPVKEHY 650
Score = 39 (18.8 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 40 NPFTGYPYTPRYHELHRKRITLPVFE 65
+P TG PY P E R++ + E
Sbjct: 423 DPITGKPYVP-LSEAEELRLSQNLLE 447
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 357 (130.7 bits), Expect = 2.2e-31, P = 2.2e-31
Identities = 82/209 (39%), Positives = 122/209 (58%)
Query: 50 RYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
R E+ + R LP+F + + +N V+ GETGSGKTTQIPQ+ E + +
Sbjct: 225 RSKEIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGYASEGEL 284
Query: 110 VACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMS 169
+ T+PRRVAA+++AQRV E+ EV Y IR+E S T + +MTDG+L++E
Sbjct: 285 IGITEPRRVAAIAMAQRVGVEL--AKPDEVSYQIRYEGTRSETTNILFMTDGVLMKEMEQ 342
Query: 170 DPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRAD----LKLVIMSATLDAGKF--Q 223
D ML+ Y VIL+DEAHER++ +D+L+G+L ++ R+ L+LVIMSATL F +
Sbjct: 343 DVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSATLRLDDFTHK 402
Query: 224 QYFD--NAPLMNVPGRTHPVEIFYTPEPP 250
+ F ++ V R PV + + P
Sbjct: 403 KLFPLLTPKVIKVDARQFPVSVHFEKRTP 431
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 346 (126.9 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 80/191 (41%), Positives = 120/191 (62%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-Y-SKSVGAKA-VACTQPRR 117
LPV +R + + Q+ +V+ G+TG GKTT+IPQ +E Y ++ GA+ V TQPRR
Sbjct: 406 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 465
Query: 118 VAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKT---VLKYMTDGMLLREGMSDPMLE 174
++A+SVAQRVS E+ L + VG+ +R E S P + L + T G+LLR+ S+P LE
Sbjct: 466 ISAVSVAQRVSHELGPSLRRNVGFQVRLE--SKPPSRGGALLFCTVGILLRKLQSNPSLE 523
Query: 175 NYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNV 234
+++DE HER + TD L+ +LK + + L+LV+MSAT D +F +YF P++ V
Sbjct: 524 GVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKV 583
Query: 235 PGRTHPVEIFY 245
PG +PV+ Y
Sbjct: 584 PGFMYPVKEHY 594
Score = 39 (18.8 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 40 NPFTGYPYTPRYHELHRKRITLPVFE 65
+P TG PY P E R++ + E
Sbjct: 367 DPITGKPYVPLL-EAEEVRLSQSLLE 391
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 346 (126.9 bits), Expect = 2.5e-31, Sum P(2) = 2.5e-31
Identities = 80/191 (41%), Positives = 120/191 (62%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-Y-SKSVGAKA-VACTQPRR 117
LPV +R + + Q+ +V+ G+TG GKTT+IPQ +E Y ++ GA+ V TQPRR
Sbjct: 434 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 493
Query: 118 VAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKT---VLKYMTDGMLLREGMSDPMLE 174
++A+SVAQRVS E+ L + VG+ +R E S P + L + T G+LLR+ S+P LE
Sbjct: 494 ISAVSVAQRVSHELGPSLRRNVGFQVRLE--SKPPSRGGALLFCTVGILLRKLQSNPSLE 551
Query: 175 NYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNV 234
+++DE HER + TD L+ +LK + + L+LV+MSAT D +F +YF P++ V
Sbjct: 552 GVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKV 611
Query: 235 PGRTHPVEIFY 245
PG +PV+ Y
Sbjct: 612 PGFMYPVKEHY 622
Score = 39 (18.8 bits), Expect = 2.5e-31, Sum P(2) = 2.5e-31
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 40 NPFTGYPYTPRYHELHRKRITLPVFE 65
+P TG PY P E R++ + E
Sbjct: 395 DPITGKPYVPLL-EAEEVRLSQSLLE 419
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 346 (126.9 bits), Expect = 2.5e-31, Sum P(2) = 2.5e-31
Identities = 80/191 (41%), Positives = 120/191 (62%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-Y-SKSVGAKA-VACTQPRR 117
LPV +R ++ + Q+ +V+ G+TG GKTT+IPQ +E Y ++ GA+ V TQPRR
Sbjct: 434 LPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 493
Query: 118 VAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKT---VLKYMTDGMLLREGMSDPMLE 174
++A+SVAQRVS E+ L + VG+ +R E S P L + T G+LLR+ S+P LE
Sbjct: 494 ISAVSVAQRVSHELGPSLRRNVGFQVRLE--SKPPARGGALLFCTVGILLRKLQSNPSLE 551
Query: 175 NYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNV 234
+++DE HER + TD L+ +LK + + L+LV+MSAT D +F +YF P++ V
Sbjct: 552 GVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKV 611
Query: 235 PGRTHPVEIFY 245
PG +PV+ Y
Sbjct: 612 PGFMYPVKEHY 622
Score = 39 (18.8 bits), Expect = 2.5e-31, Sum P(2) = 2.5e-31
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 40 NPFTGYPYTPRYHELHRKRITLPVFE 65
+P TG PY P E R++ + E
Sbjct: 395 DPITGKPYMP-LSEAEEVRLSQSLLE 419
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 346 (126.9 bits), Expect = 2.5e-31, Sum P(2) = 2.5e-31
Identities = 80/191 (41%), Positives = 120/191 (62%)
Query: 61 LPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVE-Y-SKSVGAKA-VACTQPRR 117
LPV +R ++ + Q+ +V+ G+TG GKTT+IPQ +E Y ++ GA+ V TQPRR
Sbjct: 434 LPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 493
Query: 118 VAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKT---VLKYMTDGMLLREGMSDPMLE 174
++A+SVAQRVS E+ L + VG+ +R E S P L + T G+LLR+ S+P LE
Sbjct: 494 ISAVSVAQRVSHELGPSLRRNVGFQVRLE--SKPPARGGALLFCTVGILLRKLQSNPSLE 551
Query: 175 NYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNV 234
+++DE HER + TD L+ +LK + + L+LV+MSAT D +F +YF P++ V
Sbjct: 552 GVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKV 611
Query: 235 PGRTHPVEIFY 245
PG +PV+ Y
Sbjct: 612 PGFMYPVKEHY 622
Score = 39 (18.8 bits), Expect = 2.5e-31, Sum P(2) = 2.5e-31
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 40 NPFTGYPYTPRYHELHRKRITLPVFE 65
+P TG PY P E R++ + E
Sbjct: 395 DPITGKPYMP-LSEAEEVRLSQSLLE 419
WARNING: HSPs involving 46 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 302 302 0.00097 115 3 11 22 0.37 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 296
No. of states in DFA: 597 (63 KB)
Total size of DFA: 211 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.28u 0.09s 24.37t Elapsed: 00:00:04
Total cpu time: 24.33u 0.09s 24.42t Elapsed: 00:00:05
Start: Thu Aug 15 14:49:48 2013 End: Thu Aug 15 14:49:53 2013
WARNINGS ISSUED: 2