RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2071
(302 letters)
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis
C virus (HCV), different isolates [TaxId: 11103]}
Length = 136
Score = 104 bits (259), Expect = 3e-28
Identities = 23/144 (15%), Positives = 42/144 (29%), Gaps = 12/144 (8%)
Query: 73 LLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMD 132
+ Q L TGSGK+T++P V P A + +S+
Sbjct: 4 VPQSFQVAHLHAPTGSGKSTKVPAAYAAQGYKVL-----VLNPSVAATLGFGAYMSKAHG 58
Query: 133 CQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATD 192
G + Y +I+ DE H +
Sbjct: 59 VDPNIRTGVRTITTGSPITYSTYGKFLA-------DGGCSGGAYDIIICDECHSTDATSI 111
Query: 193 ILMGVLKEVIKQRADLKLVIMSAT 216
+ +G + + + +V+ +AT
Sbjct: 112 LGIGTVLDQAETAGARLVVLATAT 135
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus
type 2 [TaxId: 11060]}
Length = 305
Score = 97.3 bits (241), Expect = 4e-24
Identities = 28/162 (17%), Positives = 60/162 (37%), Gaps = 8/162 (4%)
Query: 73 LLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMD 132
+ + + ++ G+GKT + V + G + + P RV A + + +
Sbjct: 5 IFRKKRLTIMDLHPGAGKTKRYLPAIVREAIKRGLRTL-ILAPTRVVAAEMEEALRGLPI 63
Query: 133 CQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATD 192
+ + + ++ M +S + NY +I++DEAH A+
Sbjct: 64 RY------QTPAIRAEHTGREIVDLMCHATFTMRLLSPIRVPNYNLIIMDEAHFTDPASI 117
Query: 193 ILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNV 234
G + + + + M+AT + NAP+M+
Sbjct: 118 AARGYIST-RVEMGEAAGIFMTATPPGSRDPFPQSNAPIMDE 158
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever
virus [TaxId: 11089]}
Length = 140
Score = 70.9 bits (172), Expect = 8e-16
Identities = 26/144 (18%), Positives = 52/144 (36%), Gaps = 8/144 (5%)
Query: 73 LLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMD 132
+L + VL G+GKT + + + + R V + ++
Sbjct: 3 MLKKGMTTVLDFHPGAGKTRRFLPQILAECARRRLRTLVLAPTRVVLSEMKEAFHGLDVK 62
Query: 133 CQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATD 192
++ F S + V+ M L + + N++VI++DEAH A+
Sbjct: 63 F-------HTQAFSAHGSGREVIDAMCHATLTYRMLEPTRVVNWEVIIMDEAHFLDPASI 115
Query: 193 ILMGVLKEVIKQRADLKLVIMSAT 216
G + + ++M+AT
Sbjct: 116 AARGWAAH-RARANESATILMTAT 138
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 710
Score = 45.5 bits (107), Expect = 5e-06
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 12/64 (18%)
Query: 39 VNPFTGYP-YTPRYHELHR--KRITLP--VFE-----YRTEFMTLLAQNQCIVLVGETGS 88
+NP+ P Y+ + ++++ KR +P ++ YR M ++Q I+ GE+G+
Sbjct: 45 INPYKQLPIYSEKIIDMYKGKKRHEMPPHIYAIADTAYR--SMLQDREDQSILCTGESGA 102
Query: 89 GKTT 92
GKT
Sbjct: 103 GKTE 106
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium
discoideum, class-I myosin MyoE [TaxId: 44689]}
Length = 684
Score = 45.1 bits (106), Expect = 7e-06
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 12/64 (18%)
Query: 39 VNPFTGYP-YTPRYHELHR--KRITLP--VFE-----YRTEFMTLLAQNQCIVLVGETGS 88
NPF Y + + + +P ++ YR M +NQC+++ GE+G+
Sbjct: 40 TNPFKNLNIYKESDIKAYNGRYKYEMPPHMYALANDAYR--SMRQSQENQCVIISGESGA 97
Query: 89 GKTT 92
GKT
Sbjct: 98 GKTE 101
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain
{Dictyostelium discoideum [TaxId: 44689]}
Length = 712
Score = 44.7 bits (105), Expect = 9e-06
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 12/64 (18%)
Query: 39 VNPFTGYP-YTPRYHELHR--KRITLP--VFE-----YRTEFMTLLAQNQCIVLVGETGS 88
VNPF P YT ++ + +R + +F YR M QNQ +++ GE+G+
Sbjct: 79 VNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYR--SMLDDRQNQSLLITGESGA 136
Query: 89 GKTT 92
GKT
Sbjct: 137 GKTE 140
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay
scallop (Aequipecten irradians) [TaxId: 31199]}
Length = 789
Score = 44.7 bits (105), Expect = 1e-05
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 12/64 (18%)
Query: 39 VNPFTGYP-YTPRYHELHR--KRITLP--VFE-----YRTEFMTLLAQNQCIVLVGETGS 88
VNP+ P YT +R ++ +P +F Y+ M +NQ ++ GE+G+
Sbjct: 75 VNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFSVADNAYQN--MVTDRENQSCLITGESGA 132
Query: 89 GKTT 92
GKT
Sbjct: 133 GKTE 136
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 794
Score = 44.3 bits (104), Expect = 1e-05
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 12/64 (18%)
Query: 39 VNPFTGYP-YTPRYHELHR--KRITLP--VFE-----YRTEFMTLLAQNQCIVLVGETGS 88
VNP+ P Y P+ +R KR P +F Y+ FM +NQ I++ GE+G+
Sbjct: 77 VNPYKWLPVYNPKVVLAYRGKKRQEAPPHIFSISDNAYQ--FMLTDRENQSILITGESGA 134
Query: 89 GKTT 92
GKT
Sbjct: 135 GKTV 138
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken
(Gallus gallus), Va isoform [TaxId: 9031]}
Length = 730
Score = 44.4 bits (104), Expect = 1e-05
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
Query: 39 VNPFTGYP-YTPRYHELHR--KRITLP--VFE-----YRTEFMTLLAQNQCIVLVGETGS 88
+NP+ P Y + + +F Y+ M +NQ I++ GE+G+
Sbjct: 48 INPYEQLPIYGEDIINAYSGQNMGDMDPHIFAVAEEAYK--QMARDERNQSIIVSGESGA 105
Query: 89 GKTT 92
GKT
Sbjct: 106 GKTV 109
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse
gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 237
Score = 40.7 bits (94), Expect = 9e-05
Identities = 32/230 (13%), Positives = 72/230 (31%), Gaps = 23/230 (10%)
Query: 23 ATVNASVSTSIASNLQVNPFTGYPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVL 82
A A+ + + A+ + F + E RK + P + + + + +
Sbjct: 5 AAAAAAAAAAAAAAASLCLFPEDFLLKEFVEFFRKCVGEP-RAIQKMWAKRILRKESFAA 63
Query: 83 VGETGSGKTTQIPQWCVEYSKSVGAKAV-ACTQPRRVAAMSVAQRVSEEMD-------CQ 134
TG GKT+ + + V T + A ++ +E+
Sbjct: 64 TAPTGVGKTSFGLAMSLFLALKGKRCYVIFPTSLLVIQAAETIRKYAEKAGVGTENLIGY 123
Query: 135 LGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHE------RT 188
+ + + + +T L + L ++ I +D+
Sbjct: 124 YHGRIPKREKENFMQNLRNFKIVITTTQFLSKHY--RELGHFDFIFVDDVDAILKASKNV 181
Query: 189 LATDILMGVLKEVIKQRADLK----LVIMSATLDAGKFQQYFDNAPLMNV 234
L+G ++ + + L++ +AT GK + F L+N
Sbjct: 182 DKLLHLLGFHYDLKTKSWVGEARGCLMVSTATAKKGKKAELFRQ--LLNF 229
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 200
Score = 36.8 bits (85), Expect = 0.002
Identities = 27/165 (16%), Positives = 64/165 (38%), Gaps = 23/165 (13%)
Query: 74 LAQNQCIVLVGETGSGKTTQI--------PQWC---------VEYSKSVGAKAVACTQPR 116
+ + + G G GKTT + P + + PR
Sbjct: 24 IEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPITKVKGKIFFLPEEIIVPR 83
Query: 117 RVAAMSVAQRVSEEMDCQLGQ-EVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLEN 175
+++ + V+ ++ + E+ ++ + K L ++ G + R ++ +L N
Sbjct: 84 KISVEDYLKAVASLYGVKVNKNEIMDALESVEVLDLKKKLGELSQGTIRRVQLASTLLVN 143
Query: 176 YQVILLDEAHERTLATDILMG--VLKEVIKQRADLKLVIMSATLD 218
++ +LD+ +A D VLK +++ + +VI+S+ +
Sbjct: 144 AEIYVLDDP---VVAIDEDSKHKVLKSILEILKEKGIVIISSREE 185
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase domain {Yellow fever
virus [TaxId: 11089]}
Length = 299
Score = 36.1 bits (83), Expect = 0.003
Identities = 7/35 (20%), Positives = 11/35 (31%), Gaps = 1/35 (2%)
Query: 260 CFTRPNEAKKAADDAKM-RFAHIDGDHLTLLNVYH 293
CF P E + D + + G L +
Sbjct: 243 CFEGPEEHEILNDSGETVKCRAPGGAKKPLRPRWC 277
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 34.9 bits (79), Expect = 0.007
Identities = 15/119 (12%), Positives = 34/119 (28%), Gaps = 4/119 (3%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEV 139
IVL G +GK+TQ + VE + G +A P R + + +
Sbjct: 6 IVLEGVDRAGKSTQS-RKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDHS 64
Query: 140 GYSIRFEDCSSPKTVLKY---MTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILM 195
+ + + ++K +++ + + +
Sbjct: 65 VHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGLPK 123
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 206
Score = 34.1 bits (77), Expect = 0.012
Identities = 23/164 (14%), Positives = 52/164 (31%), Gaps = 24/164 (14%)
Query: 56 RKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQP 115
I+L +Y+ + + ++ +V TGSGKT E S
Sbjct: 66 DAEISL--RDYQEKALERWLVDKRGCIVLPTGSGKTHVAMAAINELSTPT---------- 113
Query: 116 RRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPML-E 174
+ V ++ + + + S LK +T ++ L
Sbjct: 114 -----LIVVPTLALAEQWKERLGIFGEEYVGEFSGRIKELKPLTVSTYDSAYVNAEKLGN 168
Query: 175 NYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLD 218
+ +++ DE H + ++ + + ++AT +
Sbjct: 169 RFMLLIFDEVHH------LPAESYVQIAQMSIAPFRLGLTATFE 206
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence
recognition protein Ffh {Archaeon Acidianus ambivalens
[TaxId: 2283]}
Length = 211
Score = 34.0 bits (77), Expect = 0.014
Identities = 22/125 (17%), Positives = 41/125 (32%), Gaps = 8/125 (6%)
Query: 80 IVLVGETGSGKTT---QIPQWCVEYSKSVGAKAVACTQPR-----RVAAMSVAQRVSEEM 131
I+LVG G+GK T ++ + + VG +P + + V E
Sbjct: 15 IMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEP 74
Query: 132 DCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLAT 191
+ + + S ++ T G + + E + + E TL
Sbjct: 75 GEKDVVGIAKRGVEKFLSEKMEIIIVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVI 134
Query: 192 DILMG 196
D +G
Sbjct: 135 DASIG 139
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus
[TaxId: 2234]}
Length = 202
Score = 33.4 bits (75), Expect = 0.017
Identities = 26/172 (15%), Positives = 58/172 (33%), Gaps = 13/172 (7%)
Query: 54 LHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACT 113
L + I F + E + + + ++L T +GKT V + G
Sbjct: 18 LKEEGIEEL-FPPQAEAVEKVFSGKNLLLAMPTAAGKTLLAEMAMVREAIKGGKS--LYV 74
Query: 114 QPRRVAAMSVAQRVSEEMDCQLGQEV--GYSIRFEDCSSPKTVLKYMTDGMLLREGMSDP 171
P R A + + L + G ++ ++ ++
Sbjct: 75 VPLRALAGEKYESFKKWEKIGLRIGISTGDYESRDEHLGDCDIIVTTSEKADSLIRNRAS 134
Query: 172 MLENYQVILLDEAHE-----RTLATDILMGVLKEVIKQRADLKLVIMSATLD 218
++ +++DE H R +IL+ ++ + L+++ +SAT
Sbjct: 135 WIKAVSCLVVDEIHLLDSEKRGATLEILVTKMR---RMNKALRVIGLSATAP 183
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 33.1 bits (74), Expect = 0.021
Identities = 21/140 (15%), Positives = 37/140 (26%), Gaps = 7/140 (5%)
Query: 78 QCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVS-----EEMD 132
+ + L G G GKTT I + S T+ R + V
Sbjct: 2 RHVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPL 61
Query: 133 CQLGQEVGYSIRFEDCSSPKTVLKYMTD-GMLLREGMSDPMLENYQVILLDEAHERTLAT 191
++G E R L + + +V ++DE + L +
Sbjct: 62 SRVGLEPPPGKRECRVGQYVVDLTSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMELFS 121
Query: 192 DILMGVLKEVIKQRADLKLV 211
L ++
Sbjct: 122 Q-LFIQAVRQTLSTPGTIIL 140
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 32.3 bits (72), Expect = 0.040
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 77 NQCIVLVGETGSGKTTQI 94
N+ +V+ G G G TT
Sbjct: 1 NKVVVVTGVPGVGSTTSS 18
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 31.9 bits (71), Expect = 0.053
Identities = 16/109 (14%), Positives = 31/109 (28%), Gaps = 5/109 (4%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEV 139
I++ GE G GKTT + + K + R + +
Sbjct: 3 IIITGEPGVGKTTLVKKIVERLGKRAI--GFWTEEVRDPETKKRTGFRIITTEGKKKIFS 60
Query: 140 GYSIRFEDCSSPKTVLKYMTD---GMLLREGMSDPMLENYQVILLDEAH 185
+ V + +L + + +VI++DE
Sbjct: 61 SKFFTSKKLVGSYGVNVQYFEELAIPILERAYREAKKDRRKVIIIDEIG 109
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence
recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Length = 207
Score = 32.0 bits (72), Expect = 0.061
Identities = 15/86 (17%), Positives = 30/86 (34%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEV 139
LVG GSGKTT + + Y + +R AA + + E++ + + +
Sbjct: 13 WFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVM 72
Query: 140 GYSIRFEDCSSPKTVLKYMTDGMLLR 165
+ + ++L
Sbjct: 73 DGESPESIRRRVEEKARLEARDLILV 98
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 32.0 bits (72), Expect = 0.062
Identities = 11/54 (20%), Positives = 18/54 (33%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDC 133
+++VG G GKTT I + Y R A + + +
Sbjct: 9 VLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSI 62
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId:
10665]}
Length = 282
Score = 32.2 bits (72), Expect = 0.067
Identities = 21/178 (11%), Positives = 42/178 (23%), Gaps = 10/178 (5%)
Query: 45 YPYTPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKS 104
+ KRI ++ F L N+ +L T +G++ Y
Sbjct: 98 EWLSKLEIYSGNKRIEPHWYQKDAVFEGL--VNRRRILNLPTSAGRSLIQ-ALLARYYLE 154
Query: 105 VGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLL 164
+ P +A + K +
Sbjct: 155 NYEGKILIIVPTTALTTQMADDFVDYRLFSHAMIKKIGGGASKDDKYKNDAPVVVGTWQT 214
Query: 165 REGMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVI-MSATLDAGK 221
+ +++ DE H + +I + +S +L GK
Sbjct: 215 VVKQPKEWFSQFGMMMNDECH-LATG-----KSISSIISGLNNCMFKFGLSGSLRDGK 266
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId:
562]}
Length = 210
Score = 31.8 bits (71), Expect = 0.069
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRR 117
IV+ G G+GKTT VE + +G + + T+
Sbjct: 5 IVIEGLEGAGKTTAR-NVVVETLEQLGIRDMVFTREPG 41
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 31.1 bits (69), Expect = 0.11
Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 5/79 (6%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEV 139
IV+ G +G+GK+T + + EY S G + T+ R + ++ + E
Sbjct: 4 IVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEV-----NGKDYNFVSVDEF 58
Query: 140 GYSIRFEDCSSPKTVLKYM 158
I+ +
Sbjct: 59 KSMIKNNEFIEWAQFSGNY 77
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 31.1 bits (69), Expect = 0.12
Identities = 19/222 (8%), Positives = 47/222 (21%), Gaps = 28/222 (12%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEV 139
I + G +GK+T + + + + V +
Sbjct: 5 ISIEGNIAAGKSTFV-NILKQLCEDWEVVPEPVARWCNVQSTQDEFE------------- 50
Query: 140 GYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLK 199
+ + G +L+ P ++ L G LK
Sbjct: 51 ------------ELTMSQKNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLK 98
Query: 200 EVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEPPLGAGPWLPQ 259
+ K + + S + + +
Sbjct: 99 DAEKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIY 158
Query: 260 CFTRPNEAK-KAADDAKMRFAHIDGDHLTLLN-VYHAFKQRF 299
P + + I ++L L+ + ++
Sbjct: 159 LQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHR 200
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 31.0 bits (70), Expect = 0.14
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 74 LAQNQCIVLVGETGSGKTT 92
+ Q + I +VG +GSGK+T
Sbjct: 26 IKQGEVIGIVGRSGSGKST 44
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 30.9 bits (68), Expect = 0.14
Identities = 13/109 (11%), Positives = 34/109 (31%)
Query: 79 CIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQE 138
L+G G+GKT + + Y A+ V ++ ++ ++ +
Sbjct: 45 RATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTAIIGEIARSLNIPFPRR 104
Query: 139 VGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHER 187
F + + ++L + + I L + ++
Sbjct: 105 GLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEADK 153
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic
domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 254
Score = 31.2 bits (69), Expect = 0.14
Identities = 25/190 (13%), Positives = 50/190 (26%), Gaps = 5/190 (2%)
Query: 74 LAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDC 133
+ + GE GSGKT V + + + E+
Sbjct: 33 IETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIWIDTENTFRPERIREIAQ 92
Query: 134 QLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDI 193
G + ++ + M + + + + + V LL +
Sbjct: 93 NRGLDPDEVLKHIYVARAFNSNHQMLLVQQAEDKIKELLNTDRPVKLLIVDSLTSHFRSE 152
Query: 194 LMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEPPLGA 253
+G +Q+ K + + +D A + + P F P P+G
Sbjct: 153 YIGRGALAERQQKLAKHLADLH-----RLANLYDIAVFVTNQVQARPDAFFGDPTRPIGG 207
Query: 254 GPWLPQCFTR 263
R
Sbjct: 208 HILAHSATLR 217
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 31.0 bits (70), Expect = 0.14
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 74 LAQNQCIVLVGETGSGKTT 92
+ + + + + G TGSGKT+
Sbjct: 59 IEKGEMLAITGSTGSGKTS 77
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase
PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Length = 200
Score = 30.5 bits (67), Expect = 0.16
Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 7/170 (4%)
Query: 75 AQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKA---VACTQPRRVAAMSVAQRVSEEM 131
+ ++V TG GKT G K A S + +
Sbjct: 21 CKETNCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLAPTKPLVLQHAESFRRLFNLPP 80
Query: 132 DCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLRE-GMSDPMLENYQVILLDEAHERTLA 190
+ + S + + + T + + LE+ +I+ DEAH
Sbjct: 81 EKIVALTGEKSPEERSKAWARAKVIVATPQTIENDLLAGRISLEDVSLIVFDEAHRAVGN 140
Query: 191 TDILMGVLKEVIKQRADLKLVIMSATLDAG--KFQQYFDNAPLMNVPGRT 238
+ + +E +Q + ++ ++A+ + K + +N + ++ R+
Sbjct: 141 YAYVF-IAREYKRQAKNPLVIGLTASPGSTPEKIMEVINNLGIEHIEYRS 189
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 30.6 bits (69), Expect = 0.16
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 74 LAQNQCIVLVGETGSGKTT 92
N I G +G GK+T
Sbjct: 25 AQPNSIIAFAGPSGGGKST 43
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 30.6 bits (69), Expect = 0.18
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 74 LAQNQCIVLVGETGSGKTT 92
L + LVG GSGK+T
Sbjct: 37 LRPGEVTALVGPNGSGKST 55
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 30.7 bits (69), Expect = 0.19
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 74 LAQNQCIVLVGETGSGKTT 92
+ + ++L+G +G GKTT
Sbjct: 26 VKDGEFMILLGPSGCGKTT 44
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 30.4 bits (67), Expect = 0.20
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 80 IVLVGETGSGKTTQI 94
++ G G GK+T +
Sbjct: 4 GIVTGIPGVGKSTVL 18
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022,
N-terminal domain {Pyrococcus horikoshii [TaxId:
53953]}
Length = 239
Score = 30.5 bits (69), Expect = 0.21
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 74 LAQNQCIVLVGETGSGKTT 92
+ + +VL+G +G GKTT
Sbjct: 29 IKDGEFLVLLGPSGCGKTT 47
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 30.3 bits (68), Expect = 0.22
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 74 LAQNQCIVLVGETGSGKTT 92
+ + + +V VG +G GK+T
Sbjct: 23 IHEGEFVVFVGPSGCGKST 41
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 30.2 bits (68), Expect = 0.23
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 74 LAQNQCIVLVGETGSGKTT 92
I ++G +GSGK+T
Sbjct: 25 ARAGDVISIIGSSGSGKST 43
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 30.4 bits (68), Expect = 0.23
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 74 LAQNQCIVLVGETGSGKTT 92
+ + ++G +G+GKTT
Sbjct: 28 IENGERFGILGPSGAGKTT 46
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 30.0 bits (67), Expect = 0.25
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 74 LAQNQCIVLVGETGSGKTT 92
+ + V++G TG+GKT
Sbjct: 23 VESGEYFVILGPTGAGKTL 41
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 30.1 bits (67), Expect = 0.26
Identities = 27/129 (20%), Positives = 44/129 (34%), Gaps = 12/129 (9%)
Query: 80 IVLVGETGSGKTT---QIPQWCVEYSKSVGAKAVACTQPRRVA-----AMSVAQRVSEEM 131
I++VG G+GKTT ++ + V+ KSV A + + V V
Sbjct: 14 IMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGERVGATVISHS 73
Query: 132 DCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREG----MSDPMLENYQVILLDEAHER 187
+ V + + K V+ T G L + + + + D HE
Sbjct: 74 EGADPAAVAFDAVAHALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHET 133
Query: 188 TLATDILMG 196
L D G
Sbjct: 134 LLVIDATTG 142
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus
[TaxId: 2261]}
Length = 329
Score = 30.3 bits (67), Expect = 0.29
Identities = 9/37 (24%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 57 KRITLPVF-EYRTEFMTLLAQNQCIVLVGETGSGKTT 92
+++ L F Y + + + +VG GSGK+
Sbjct: 5 EKLELKGFKSYGNKKVVIPFSKGFTAIVGANGSGKSN 41
>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga
maritima [TaxId: 2336]}
Length = 194
Score = 29.6 bits (66), Expect = 0.29
Identities = 9/65 (13%), Positives = 17/65 (26%)
Query: 48 TPRYHELHRKRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGA 107
+ E + +L + + G G T + +K +G
Sbjct: 56 RGLGAGGRPEIGEQAALESEEKIREVLQDTHMVFITAGFGGGTGTGASPVIAKIAKEMGI 115
Query: 108 KAVAC 112
VA
Sbjct: 116 LTVAI 120
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC
transporter MsbA, C-terminal domain {Salmonella
typhimurium [TaxId: 90371]}
Length = 253
Score = 29.8 bits (67), Expect = 0.29
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 74 LAQNQCIVLVGETGSGKTT 92
+ + + LVG +GSGK+T
Sbjct: 38 IPAGKTVALVGRSGSGKST 56
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 30.1 bits (68), Expect = 0.30
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 74 LAQNQCIVLVGETGSGKTT 92
+ + + + VG +G GK+T
Sbjct: 41 IEKGETVAFVGMSGGGKST 59
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 30.1 bits (66), Expect = 0.30
Identities = 9/106 (8%), Positives = 19/106 (17%)
Query: 74 LAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDC 133
+ + GE +GKT V + + +
Sbjct: 20 IETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAE 79
Query: 134 QLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVI 179
+ G + + M + V
Sbjct: 80 RYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALLIVD 125
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 29.5 bits (65), Expect = 0.33
Identities = 12/55 (21%), Positives = 21/55 (38%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQ 134
+VL G +G+GK+T + + E+S G T+ R +
Sbjct: 3 VVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMM 57
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 29.6 bits (65), Expect = 0.39
Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRR 117
I + G G+GK T + + ++ G PR
Sbjct: 3 IAIEGVDGAGKRTLV-EKLSGAFRAAGRSVATLAFPRY 39
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 29.1 bits (64), Expect = 0.42
Identities = 22/171 (12%), Positives = 58/171 (33%), Gaps = 23/171 (13%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVA---AMSVAQRVSEEMD--CQ 134
++L+G G+GK TQ V+ ++ +G ++ + R + +D
Sbjct: 3 VLLLGPPGAGKGTQ----AVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDL 58
Query: 135 LGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDIL 194
+ ++ + + ++P ++ DG + + E + + +
Sbjct: 59 VPSDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLE------RRGTDIDAVLE 112
Query: 195 MGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFY 245
V +EV+ +R + + + + T P+ +Y
Sbjct: 113 FRVSEEVLLERLKGRGRADDTDDVILNRMKVYRD--------ETAPLLEYY 155
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic
domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Length = 258
Score = 29.3 bits (64), Expect = 0.46
Identities = 24/191 (12%), Positives = 45/191 (23%), Gaps = 1/191 (0%)
Query: 74 LAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDC 133
L G GSGKT + Q CV + A A + E
Sbjct: 31 LESQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPKAVYIDTEGTF 90
Query: 134 QLGQEVGYSIRF-EDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATD 192
+ + + + D + + + +E+ + +
Sbjct: 91 RPERIMQMAEHAGIDGQTVLDNTFVARAYNSDMQMLFAEKIEDLIQEGNNIKLVVIDSLT 150
Query: 193 ILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEPPLG 252
+ A+ + + K F+ L+ P F E +G
Sbjct: 151 STFRNEYTGRGKLAERQQKLGRHMATLNKLADLFNCVVLVTNQVSAKPDAFFGMAEQAIG 210
Query: 253 AGPWLPQCFTR 263
R
Sbjct: 211 GHIVGHAATFR 221
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 29.1 bits (64), Expect = 0.51
Identities = 18/171 (10%), Positives = 44/171 (25%), Gaps = 4/171 (2%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEV 139
++L+G SGK+T I Q + + V + + + V + +
Sbjct: 5 LLLLGTGESGKSTFIKQMRIIHGSGVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIH 64
Query: 140 GYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERT----LATDILM 195
+ E + ++ I+ + + +
Sbjct: 65 CFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDL 124
Query: 196 GVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYT 246
K + D DA +++ + P + +T
Sbjct: 125 LEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFT 175
>d1t95a1 a.5.8.1 (A:87-161) Hypothetical protein AF0491, middle
domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 75
Score = 27.3 bits (61), Expect = 0.54
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 13 ITKKNREERLATVNASVSTSIASNLQVNPFTGYPYTP 49
IT + R E L + I+ N ++P T P+ P
Sbjct: 7 ITAEQRREMLEAKRKQIINFISRNT-IDPRTNAPHPP 42
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 28.9 bits (63), Expect = 0.56
Identities = 4/15 (26%), Positives = 9/15 (60%)
Query: 80 IVLVGETGSGKTTQI 94
+ ++G SGK+ +
Sbjct: 10 VAILGGESSGKSVLV 24
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 29.0 bits (65), Expect = 0.61
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 74 LAQNQCIVLVGETGSGKTT 92
+ + + + ++G +GSGK+T
Sbjct: 28 IKEGEFVSIMGPSGSGKST 46
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 28.7 bits (64), Expect = 0.66
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 74 LAQNQCIVLVGETGSGKTT 92
+ + + LVG G+GK+T
Sbjct: 22 VRAGEILHLVGPNGAGKST 40
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import
ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus
[TaxId: 2234]}
Length = 240
Score = 28.8 bits (64), Expect = 0.68
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 80 IVLVGETGSGKTT 92
VL+G TG+GK+
Sbjct: 27 CVLLGPTGAGKSV 39
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 28.5 bits (62), Expect = 0.68
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 70 FMTLLAQNQCIVLVGETGSGKTT 92
F+ L + +V +G +GKTT
Sbjct: 6 FLGLYKKTGKLVFLGLDNAGKTT 28
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 28.5 bits (62), Expect = 0.71
Identities = 6/28 (21%), Positives = 16/28 (57%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKSVGA 107
++++G +GKTT + ++ E ++
Sbjct: 5 LLMLGLDNAGKTTILKKFNGEDVDTISP 32
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 28.5 bits (63), Expect = 0.78
Identities = 14/55 (25%), Positives = 25/55 (45%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQ 134
I++VG G GKTT I + ++ + + +A R AA+ Q + +
Sbjct: 12 ILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIP 66
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 28.4 bits (62), Expect = 0.81
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKSVGAK 108
++L+G SGK+T + Q + + G
Sbjct: 5 LLLLGAGESGKSTIVKQMKIIHEAGTGIV 33
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 28.6 bits (62), Expect = 0.93
Identities = 3/18 (16%), Positives = 10/18 (55%)
Query: 75 AQNQCIVLVGETGSGKTT 92
+ +++G +GK++
Sbjct: 27 LRAPITLVLGLRRTGKSS 44
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 28.0 bits (61), Expect = 1.1
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 80 IVLVGETGSGKTTQ 93
+VL+G G+GK TQ
Sbjct: 5 MVLIGPPGAGKGTQ 18
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 28.0 bits (61), Expect = 1.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 80 IVLVGETGSGKTTQ 93
I+L+G +GK TQ
Sbjct: 3 IILLGAPVAGKGTQ 16
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 28.0 bits (61), Expect = 1.1
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 78 QCIVLVGETGSGKTTQ 93
+ ++G GSGK TQ
Sbjct: 7 NVVFVLGGPGSGKGTQ 22
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 28.0 bits (61), Expect = 1.1
Identities = 27/147 (18%), Positives = 50/147 (34%), Gaps = 13/147 (8%)
Query: 74 LAQNQCIVLVGETGSGKTTQIPQWCVEYS---KSVGAKAVACTQPRRVAAMSVAQRVSEE 130
L +++ I +VG GSGK TQ + +Y S G A +++ + +
Sbjct: 5 LKKSKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSARGKMLSEIMEKG 64
Query: 131 --MDCQLGQEVGYSIRFEDCSSPKTVLK-----YMTDGMLLREGMSDPMLENYQVILLDE 183
+ + ++ + K L + G + P L Y +
Sbjct: 65 QLVPLETVLDMLRDAMVAKVDTSKGFLIDGYPREVKQGEEFERKIGQPTLLLYVDAGPET 124
Query: 184 AHERTLATDILMG---VLKEVIKQRAD 207
+R L G +E IK+R +
Sbjct: 125 MTKRLLKRGETSGRVDDNEETIKKRLE 151
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 27.6 bits (60), Expect = 1.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 80 IVLVGETGSGKTTQ 93
I+L G G GKTT
Sbjct: 7 ILLTGTPGVGKTTL 20
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 27.6 bits (60), Expect = 1.3
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 80 IVLVGETGSGKTTQ 93
+VL+G G+GK TQ
Sbjct: 3 LVLMGLPGAGKGTQ 16
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 27.5 bits (60), Expect = 1.3
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 80 IVLVGETGSGKTTQ 93
IVL+G G+GK TQ
Sbjct: 3 IVLMGLPGAGKGTQ 16
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 27.5 bits (60), Expect = 1.3
Identities = 17/108 (15%), Positives = 37/108 (34%), Gaps = 9/108 (8%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEV 139
+++G+TG GK+ + Q+ + + +++ ++ GQE
Sbjct: 6 YIIIGDTGVGKSCLLLQFT-DKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQES 64
Query: 140 GYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHER 187
SI G LL ++ N+ L++A +
Sbjct: 65 FRSITRSYY--------RGAAGALLVYDITRRETFNHLTSWLEDARQH 104
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 27.6 bits (60), Expect = 1.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 80 IVLVGETGSGKTTQ 93
VL+G G+GK TQ
Sbjct: 6 AVLLGPPGAGKGTQ 19
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544
{Thermotoga maritima [TaxId: 2336]}
Length = 238
Score = 27.6 bits (61), Expect = 1.5
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 74 LAQNQCIVLVGETGSGKTT 92
+ + + L+G G+GKTT
Sbjct: 25 IEEGEIFGLIGPNGAGKTT 43
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus
influenzae [TaxId: 727]}
Length = 158
Score = 27.3 bits (60), Expect = 1.5
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 79 CIVLVGETGSGKTTQIPQWCVEYSKSVGAKA 109
+ L G+ G+GKTT K+
Sbjct: 35 MVYLNGDLGAGKTTLTRGMLQGIGHQGNVKS 65
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 27.6 bits (60), Expect = 1.5
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKSV 105
I+++G G+GKTT + + + +
Sbjct: 20 ILILGLDGAGKTTILYRLQIGEVVTT 45
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 27.3 bits (59), Expect = 1.5
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 80 IVLVGETGSGKTT 92
++ +G +GKTT
Sbjct: 3 LLFLGLDNAGKTT 15
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 27.5 bits (61), Expect = 1.6
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 74 LAQNQCIVLVGETGSGKTT 92
+ Q ++G +G+GK+T
Sbjct: 28 VPAGQIYGVIGASGAGKST 46
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 27.3 bits (59), Expect = 1.6
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
V+VG+ GKT + +
Sbjct: 12 CVVVGDGAVGKTCLLMSYA 30
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 27.7 bits (60), Expect = 1.7
Identities = 8/45 (17%), Positives = 13/45 (28%)
Query: 78 QCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMS 122
LV G+GK+ Q + + V V +
Sbjct: 30 TVGALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLP 74
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania
major [TaxId: 5664]}
Length = 174
Score = 27.3 bits (59), Expect = 1.7
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 80 IVLVGETGSGKTTQ 93
I++ G G+GKT+
Sbjct: 8 ILITGTPGTGKTSM 21
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 27.6 bits (61), Expect = 1.7
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 74 LAQNQCIVLVGETGSGKTT 92
+ + +++G GSGK+T
Sbjct: 27 VNKGDVTLIIGPNGSGKST 45
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top
tamarin (Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 27.2 bits (59), Expect = 1.7
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+++VG G GK+ Q+
Sbjct: 7 VIMVGSGGVGKSALTLQFM 25
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 27.4 bits (59), Expect = 1.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 76 QNQCIVLVGETGSGKTT 92
+ + I LVG G+GK+T
Sbjct: 1 EKRNIFLVGPMGAGKST 17
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 27.3 bits (59), Expect = 1.8
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
V+VG+ GKT + +
Sbjct: 8 CVVVGDGAVGKTCLLISYT 26
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 27.2 bits (59), Expect = 1.8
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKS 104
I+++G +GKTT + + + S +
Sbjct: 15 ILMLGLDAAGKTTILYKLKLGQSVT 39
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 27.1 bits (59), Expect = 1.8
Identities = 12/80 (15%), Positives = 28/80 (35%), Gaps = 3/80 (3%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVA-QRVSEEMDCQLGQE 138
+++G+ G GK+ + Q+ K + + V+ Q++ ++ GQE
Sbjct: 7 YIIIGDMGVGKSCLLHQFT--EKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 64
Query: 139 VGYSIRFEDCSSPKTVLKYM 158
++ L
Sbjct: 65 RFRAVTRSYYRGAAGALMVY 84
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 27.8 bits (60), Expect = 1.8
Identities = 5/13 (38%), Positives = 11/13 (84%)
Query: 80 IVLVGETGSGKTT 92
+++G+ GSGK++
Sbjct: 26 NLIIGQNGSGKSS 38
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 27.4 bits (60), Expect = 1.8
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 80 IVLVGETGSGKTTQIPQWCV-EYSKSVGAK 108
++L+G SGK+T + Q + + G
Sbjct: 9 LLLLGAGESGKSTIVKQMRILHVVLTSGIF 38
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 27.0 bits (58), Expect = 1.8
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 80 IVLVGETGSGKTTQIPQWCVEY 101
I+ +G GSGK+T ++ +
Sbjct: 5 ILTIGCPGSGKSTWAREFIAKN 26
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 27.3 bits (59), Expect = 1.8
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+V++G G GK+ Q+
Sbjct: 6 LVVLGSGGVGKSALTVQFV 24
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 27.3 bits (59), Expect = 1.9
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+V+VG G GK+ Q+
Sbjct: 9 LVVVGGGGVGKSALTIQFI 27
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 27.4 bits (59), Expect = 1.9
Identities = 20/223 (8%), Positives = 42/223 (18%), Gaps = 17/223 (7%)
Query: 77 NQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLG 136
N +G G GKTT K K V+ + + A +
Sbjct: 46 NMIYGSIGRVGIGKTTLA--------KFT-VKRVSEAAAKEGLTVKQAYVNAFNAPNLYT 96
Query: 137 QEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLEN---YQVILLDEAHERTLATDI 193
+ + L+ + + + +
Sbjct: 97 ILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRIAAEDLY 156
Query: 194 LMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEPPLGA 253
+ + E I R + + + Y + + L
Sbjct: 157 TLLRVHEEIPSRDGVNRIGFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYT 216
Query: 254 GPWLPQCFTRPN-----EAKKAADDAKMRFAHIDGDHLTLLNV 291
+ + D DG +
Sbjct: 217 ILEQRAELGLRDTVWEPRHLELISDVYGEDKGGDGSARRAIVA 259
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 27.1 bits (59), Expect = 1.9
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 80 IVLVGETGSGKTTQ 93
++G GSGK T
Sbjct: 9 AAIMGAPGSGKGTV 22
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 27.3 bits (59), Expect = 2.0
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+++VG +GKTT + Q+
Sbjct: 18 VIIVGLDNAGKTTILYQFS 36
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 27.2 bits (59), Expect = 2.0
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 80 IVLVGETGSGKTTQ 93
+++ G SGK TQ
Sbjct: 6 VMISGAPASGKGTQ 19
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 27.3 bits (59), Expect = 2.0
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 79 CIVLVGETGSGKTTQ 93
I ++G G+GK TQ
Sbjct: 10 VIFVLGGPGAGKGTQ 24
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 27.2 bits (59), Expect = 2.0
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 80 IVLVGETGSGKTTQI 94
I++ G +GKTTQ
Sbjct: 6 ILIEGLDRTGKTTQC 20
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 27.2 bits (60), Expect = 2.0
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 74 LAQNQCIVLVGETGSGKTT 92
+ + Q + L+G G+GKTT
Sbjct: 29 VPRGQIVTLIGANGAGKTT 47
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 194
Score = 27.2 bits (59), Expect = 2.1
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 80 IVLVGETGSGKTTQ 93
+ ++G G+GK TQ
Sbjct: 4 VFVLGGPGAGKGTQ 17
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 26.9 bits (58), Expect = 2.1
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 80 IVLVGETGSGKTT 92
I++VG +GKTT
Sbjct: 3 ILMVGLDAAGKTT 15
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 26.9 bits (58), Expect = 2.1
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+V+VG+ GKT +
Sbjct: 5 LVIVGDGACGKTCLLIVNS 23
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 26.9 bits (58), Expect = 2.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Query: 80 IVLVGETGSGKTT 92
VLVG GSGK+T
Sbjct: 4 AVLVGLPGSGKST 16
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 27.0 bits (58), Expect = 2.1
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+V+VG GK++ I ++C
Sbjct: 5 MVVVGNGAVGKSSMIQRYC 23
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia
coli [TaxId: 562]}
Length = 222
Score = 27.3 bits (59), Expect = 2.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 81 VLVGETGSGKTT 92
L G G+GK+T
Sbjct: 28 TLSGGNGAGKST 39
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 27.2 bits (59), Expect = 2.2
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 80 IVLVGETGSGKTTQIPQWC--VEYSKSVGAK 108
I+L+G SGK+T + Q + G
Sbjct: 5 ILLLGAGESGKSTFLKQMRIIHGQDPTKGIH 35
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 27.1 bits (59), Expect = 2.2
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
++LVG++G GKT + ++
Sbjct: 9 VMLVGDSGVGKTCLLVRFK 27
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 26.9 bits (58), Expect = 2.2
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+ L+G+TG GK++ + ++
Sbjct: 7 VCLLGDTGVGKSSIMWRFV 25
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 26.9 bits (58), Expect = 2.3
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+VL+GE GK++ + ++
Sbjct: 6 LVLLGEAAVGKSSIVLRFV 24
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 26.8 bits (58), Expect = 2.3
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+V++G G GK+ Q+
Sbjct: 6 VVVLGSGGVGKSALTVQFV 24
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter
jejuni [TaxId: 197]}
Length = 161
Score = 26.8 bits (58), Expect = 2.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 80 IVLVGETGSGKTT 92
IV +G GSGK+T
Sbjct: 3 IVFIGFMGSGKST 15
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia
chrysanthemi [TaxId: 556]}
Length = 170
Score = 26.8 bits (58), Expect = 2.3
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 77 NQCIVLVGETGSGKTT 92
+ I +VG G G TT
Sbjct: 2 TEPIFMVGARGCGMTT 17
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 26.9 bits (58), Expect = 2.3
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+V+VG G GK+ Q
Sbjct: 6 LVVVGAGGVGKSALTIQLI 24
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 27.0 bits (59), Expect = 2.4
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
++L+G++G GKT + ++
Sbjct: 9 LLLIGDSGVGKTCVLFRFS 27
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 26.8 bits (58), Expect = 2.4
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
++ +G++G GKTT + ++
Sbjct: 8 LLALGDSGVGKTTFLYRYT 26
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.9 bits (58), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+V+VG G GK+ Q+
Sbjct: 8 LVVVGGGGVGKSALTIQFI 26
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 27.0 bits (58), Expect = 2.4
Identities = 17/113 (15%), Positives = 41/113 (36%), Gaps = 11/113 (9%)
Query: 80 IVLVGETGSGKTTQIPQWC-----VEYSKSVGAKAVAC------TQPRRVAAMSVAQRVS 128
++++G++G GKT+ + Q+ +Y ++GA + + Q
Sbjct: 5 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERF 64
Query: 129 EEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILL 181
+ + + + D ++P T + S EN+ ++L
Sbjct: 65 QSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 117
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 27.1 bits (59), Expect = 2.4
Identities = 9/39 (23%), Positives = 18/39 (46%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRV 118
I+++G+ G GK++ + E S+ +P V
Sbjct: 35 ILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMV 73
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 26.7 bits (58), Expect = 2.4
Identities = 6/19 (31%), Positives = 15/19 (78%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
I+++GE+G GK++ + ++
Sbjct: 10 ILIIGESGVGKSSLLLRFT 28
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 26.9 bits (58), Expect = 2.4
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+VLVG+ G+GKTT + +
Sbjct: 6 LVLVGDGGTGKTTFVKRHL 24
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 27.1 bits (59), Expect = 2.4
Identities = 4/17 (23%), Positives = 10/17 (58%)
Query: 76 QNQCIVLVGETGSGKTT 92
Q ++ +G+GK++
Sbjct: 1 QGTLYIVSAPSGAGKSS 17
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima
[TaxId: 2336]}
Length = 308
Score = 27.3 bits (59), Expect = 2.5
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 57 KRITLPVFEYRTEFMTLLAQNQCIVLVGETGSGKTT 92
K++ L F+ + ++ +VG GSGK+
Sbjct: 4 KKLYLKGFKSFGRPSLIGFSDRVTAIVGPNGSGKSN 39
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.9 bits (58), Expect = 2.5
Identities = 4/19 (21%), Positives = 11/19 (57%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+ + G G GK++ + ++
Sbjct: 5 VAVFGAGGVGKSSLVLRFV 23
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 26.8 bits (58), Expect = 2.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
I+L+G +GKTT + Q
Sbjct: 19 ILLLGLDNAGKTTLLKQLA 37
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 26.6 bits (57), Expect = 2.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+VL+GE G GK+T +
Sbjct: 6 VVLIGEQGVGKSTLANIFA 24
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 26.9 bits (58), Expect = 2.5
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 80 IVLVGETGSGKTT 92
++ VG SGKT
Sbjct: 3 VLFVGLCDSGKTL 15
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 26.6 bits (57), Expect = 2.5
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 80 IVLVGETGSGKTT 92
I+++G G+GKTT
Sbjct: 8 ILILGLDGAGKTT 20
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 26.8 bits (58), Expect = 2.6
Identities = 5/19 (26%), Positives = 12/19 (63%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+++G G+GK+ + Q+
Sbjct: 8 FLVIGNAGTGKSCLLHQFI 26
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 26.9 bits (58), Expect = 2.6
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
V+VG+ GKT + +
Sbjct: 6 CVVVGDGAVGKTCLLISYT 24
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 26.8 bits (58), Expect = 2.7
Identities = 5/19 (26%), Positives = 13/19 (68%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
I+++G + GKT+ + ++
Sbjct: 8 ILIIGNSSVGKTSFLFRYA 26
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 26.8 bits (58), Expect = 2.7
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+VL+G++G GK+ + ++
Sbjct: 7 VVLIGDSGVGKSNLLSRFT 25
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 26.9 bits (58), Expect = 2.9
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 80 IVLVGETGSGKTTQI 94
+++ G GSGKTT +
Sbjct: 12 VLIEGNIGSGKTTYL 26
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 26.5 bits (57), Expect = 2.9
Identities = 5/19 (26%), Positives = 13/19 (68%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+ ++G+ SGK++ I ++
Sbjct: 8 LGVLGDARSGKSSLIHRFL 26
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 26.6 bits (57), Expect = 3.0
Identities = 15/105 (14%), Positives = 23/105 (21%), Gaps = 4/105 (3%)
Query: 80 IVLVGETGSGKTTQIPQWC----VEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQL 135
+ LVG SGKTT + E + V
Sbjct: 5 LTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMW 64
Query: 136 GQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVIL 180
+ K L + P L+ V++
Sbjct: 65 ERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLV 109
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 26.5 bits (57), Expect = 3.0
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 80 IVLVGETGSGKTTQI 94
+VL G + GK+T +
Sbjct: 5 VVLSGPSAVGKSTVV 19
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 26.6 bits (57), Expect = 3.0
Identities = 5/19 (26%), Positives = 15/19 (78%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
++++G++G GKT+ + ++
Sbjct: 5 VIILGDSGVGKTSLMHRYV 23
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 26.5 bits (57), Expect = 3.0
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+V +GE GKT+ I ++
Sbjct: 3 LVFLGEQSVGKTSLITRFM 21
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 169
Score = 26.5 bits (57), Expect = 3.0
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+V+VG+ G GK+ Q+
Sbjct: 7 LVVVGDGGVGKSALTIQFF 25
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 26.5 bits (57), Expect = 3.0
Identities = 5/19 (26%), Positives = 14/19 (73%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
++L+G+ G GK++ + ++
Sbjct: 9 VILLGDGGVGKSSLMNRYV 27
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.3 bits (57), Expect = 3.2
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
IVL+G G GKT + ++
Sbjct: 8 IVLIGNAGVGKTCLVRRFT 26
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 26.5 bits (57), Expect = 3.2
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
IV+VG++ GKT + +
Sbjct: 5 IVVVGDSQCGKTALLHVFA 23
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 27.1 bits (58), Expect = 3.2
Identities = 5/12 (41%), Positives = 11/12 (91%)
Query: 81 VLVGETGSGKTT 92
+++G+ GSGK++
Sbjct: 27 LIIGQNGSGKSS 38
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 26.5 bits (57), Expect = 3.2
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+VL+GE+ GK++ + ++
Sbjct: 9 LVLLGESAVGKSSLVLRFV 27
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 26.5 bits (57), Expect = 3.2
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 76 QNQCIVLVGETGSGKTTQ 93
+ VL+G +GSGK+
Sbjct: 5 DHHIYVLMGVSGSGKSAV 22
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 443
Score = 27.0 bits (59), Expect = 3.4
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 80 IVLVGETGSGKT 91
I+++G TG GKT
Sbjct: 52 ILMIGPTGVGKT 63
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 26.2 bits (56), Expect = 3.4
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
I ++G GK++ Q+
Sbjct: 7 IAILGYRSVGKSSLTIQFV 25
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 26.4 bits (57), Expect = 3.4
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+VL+GE GKT+ + ++C
Sbjct: 6 VVLLGEGCVGKTSLVLRYC 24
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 26.5 bits (57), Expect = 3.5
Identities = 5/17 (29%), Positives = 9/17 (52%)
Query: 77 NQCIVLVGETGSGKTTQ 93
+ ++ G G GK+T
Sbjct: 2 KKLYIITGPAGVGKSTT 18
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 26.8 bits (58), Expect = 3.5
Identities = 15/126 (11%), Positives = 34/126 (26%), Gaps = 3/126 (2%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEV 139
I+ G TG+GKT + ++ + + + R + A + + Q +
Sbjct: 29 ILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNL 88
Query: 140 GYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLENYQVILLDEAHERTLATDILMGVLK 199
++ L+ + P + A + +
Sbjct: 89 ---LKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALARGVSNNAFRQFVIGVT 145
Query: 200 EVIKQR 205
KQ
Sbjct: 146 GYAKQE 151
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 26.5 bits (57), Expect = 3.6
Identities = 5/16 (31%), Positives = 10/16 (62%)
Query: 77 NQCIVLVGETGSGKTT 92
+ I+L G + +GK+
Sbjct: 3 TRMIILNGGSSAGKSG 18
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 26.4 bits (57), Expect = 3.6
Identities = 7/38 (18%), Positives = 14/38 (36%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRR 117
+VL+G G G+ ++ T+P +
Sbjct: 6 LVLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRPPK 43
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 26.5 bits (57), Expect = 3.7
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 80 IVLVGETGSGKTT 92
IV+VG GKT
Sbjct: 5 IVMVGLPARGKTY 17
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 26.5 bits (57), Expect = 3.8
Identities = 4/15 (26%), Positives = 8/15 (53%)
Query: 80 IVLVGETGSGKTTQI 94
+ + G GK+T +
Sbjct: 5 LSIEGNIAVGKSTFV 19
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 427
Score = 26.6 bits (57), Expect = 3.9
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 81 VLVGETGSGKTT 92
++G GSGK+
Sbjct: 29 SIIGPNGSGKSN 40
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 26.1 bits (56), Expect = 3.9
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
I+++G++ GKT ++C
Sbjct: 5 IIVIGDSNVGKTCLTYRFC 23
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 26.4 bits (57), Expect = 4.2
Identities = 5/19 (26%), Positives = 13/19 (68%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
++L+G +G GK+ + ++
Sbjct: 9 LLLIGNSGVGKSCLLLRFS 27
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15
homolog {Human (Homo sapiens) [TaxId: 9606]}
Length = 258
Score = 26.6 bits (57), Expect = 4.2
Identities = 7/78 (8%), Positives = 16/78 (20%)
Query: 74 LAQNQCIVLVGETGSGKTTQIPQWCVEYSKSVGAKAVACTQPRRVAAMSVAQRVSEEMDC 133
+ GE +GKT CV + ++
Sbjct: 34 IESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIAD 93
Query: 134 QLGQEVGYSIRFEDCSSP 151
+ + + +
Sbjct: 94 RFNVDHDAVLDNVLYARA 111
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 25.9 bits (56), Expect = 4.4
Identities = 6/13 (46%), Positives = 11/13 (84%)
Query: 80 IVLVGETGSGKTT 92
I+L+G++G GK+
Sbjct: 5 ILLIGDSGVGKSC 17
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 26.2 bits (56), Expect = 4.4
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 80 IVLVGETGSGKTT 92
I+ G + GK+T
Sbjct: 3 IIFAGRSNVGKST 15
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase
TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 25.9 bits (55), Expect = 4.5
Identities = 4/13 (30%), Positives = 9/13 (69%)
Query: 80 IVLVGETGSGKTT 92
+V+ G +GK++
Sbjct: 4 VVIAGRPNAGKSS 16
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 26.1 bits (56), Expect = 4.6
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKS 104
++ G +G+GKT Q+
Sbjct: 29 TLVSGTSGTGKTLFSIQFLYNGIIE 53
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 25.9 bits (55), Expect = 4.8
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 80 IVLVGETGSGKTT 92
++L+G G GK+
Sbjct: 4 VLLLGAPGVGKSA 16
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 25.7 bits (55), Expect = 5.0
Identities = 4/19 (21%), Positives = 10/19 (52%)
Query: 80 IVLVGETGSGKTTQIPQWC 98
+ + G G GK+ + ++
Sbjct: 5 LAIFGRAGVGKSALVVRFL 23
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 25.6 bits (55), Expect = 5.4
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
Query: 80 IVLVGETGSGKTTQIPQWCVEYSKSVGAK 108
+V VG G+GK+T + E+ S G
Sbjct: 17 VVAVGFPGAGKST----FIQEHLVSAGYV 41
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 25.7 bits (55), Expect = 5.6
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 80 IVLVGETGSGKTTQ 93
++L G GSGK+T
Sbjct: 7 LLLSGHPGSGKSTI 20
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic
domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 251
Score = 25.8 bits (55), Expect = 6.1
Identities = 14/125 (11%), Positives = 29/125 (23%), Gaps = 9/125 (7%)
Query: 52 HELHRKRITLPVFEYRTEFMTL-------LAQNQCIVLVGETGSGKTTQIPQWCVEYSKS 104
+ H +R L T L + L GE +GK+ V
Sbjct: 4 ADFHMRRSELICL--TTGSKNLDTLLGGGVETGSITELFGEFRTGKSQLCHTLAVTCQIP 61
Query: 105 VGAKAVACTQPRRVAAMSVAQRVSEEMDCQLGQEVGYSIRFEDCSSPKTVLKYMTDGMLL 164
+ + + + G + ++ + +
Sbjct: 62 LDIGGGEGKCLYIDTEGTFRPVRLVSIAQRFGLDPDDALNNVAYARAYNADHQLRLLDAA 121
Query: 165 REGMS 169
+ MS
Sbjct: 122 AQMMS 126
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 25.7 bits (55), Expect = 6.2
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 80 IVLVGETGSGKTT 92
I++ G SGKT+
Sbjct: 6 IIIAGPQNSGKTS 18
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 25.7 bits (55), Expect = 6.4
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 80 IVLVGETGSGKTT 92
+ +G+GKTT
Sbjct: 5 LAFAAWSGTGKTT 17
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 25.5 bits (54), Expect = 6.6
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 80 IVLVGETGSGKTT 92
+ +VG+ GK+T
Sbjct: 8 VAIVGKPNVGKST 20
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase
domain {Simian virus 40 [TaxId: 10633]}
Length = 362
Score = 25.8 bits (56), Expect = 7.0
Identities = 7/30 (23%), Positives = 15/30 (50%)
Query: 63 VFEYRTEFMTLLAQNQCIVLVGETGSGKTT 92
V+++ + + + + + G SGKTT
Sbjct: 140 VYDFLKCMVYNIPKKRYWLFKGPIDSGKTT 169
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 25.5 bits (54), Expect = 7.2
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 80 IVLVGETGSGKTT 92
+++VG GK+T
Sbjct: 3 VLIVGRPNVGKST 15
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 25.1 bits (53), Expect = 8.6
Identities = 7/17 (41%), Positives = 7/17 (41%)
Query: 76 QNQCIVLVGETGSGKTT 92
Q I L G SGK
Sbjct: 5 QGFTIFLTGYMNSGKDA 21
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase
(APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 25.4 bits (54), Expect = 9.0
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 76 QNQCIVLVGETGSGKTT 92
+ + L G +G+GKTT
Sbjct: 18 RGCTVWLTGLSGAGKTT 34
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein
TrwB {Escherichia coli [TaxId: 562]}
Length = 433
Score = 25.7 bits (55), Expect = 9.2
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 75 AQNQCIVLVGETGSGKTTQI 94
A+ + +++ G TG+GK+ +
Sbjct: 48 AEPRHLLVNGATGTGKSVLL 67
>d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp.
[TaxId: 1831]}
Length = 291
Score = 25.2 bits (53), Expect = 9.9
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 43 TGYPYTPRYHELHRKRI 59
TG+P+ P Y E+ +R+
Sbjct: 3 TGFPFDPHYVEVLGERM 19
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.135 0.401
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,102,363
Number of extensions: 49700
Number of successful extensions: 366
Number of sequences better than 10.0: 1
Number of HSP's gapped: 359
Number of HSP's successfully gapped: 182
Length of query: 302
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 217
Effective length of database: 1,240,546
Effective search space: 269198482
Effective search space used: 269198482
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (24.9 bits)