BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2072
(294 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 195 bits (496), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/236 (49%), Positives = 138/236 (58%), Gaps = 43/236 (18%)
Query: 3 LHPIVIETLMSGDEL---------RTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADN 53
+ P ETLM EL DL L S MA D + + SC
Sbjct: 528 MDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASC-------- 579
Query: 54 LDPIAALCQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHL 113
YN + + L T ++ + Q RP EAKKAAD+AKMRFAHIDGDHL
Sbjct: 580 ---------DYNCSNEV-----LSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHL 625
Query: 114 TLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDY 173
TLLNVYHAFKQN E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R ST+FTS+DY
Sbjct: 626 TLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDY 685
Query: 174 YINIRKSLVTGFFMQL---------IIVLAYPISSL-PTVSLDQEDPQWC-YDNFV 218
YINIRK+LVTG+FMQ+ + V + L P+ LD + P+W Y+ FV
Sbjct: 686 YINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHK-PEWVLYNEFV 740
Score = 117 bits (293), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 52/64 (81%), Positives = 58/64 (90%)
Query: 206 DQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTG 265
+ E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R ST+FTS+DYYINIRK+LVTG
Sbjct: 637 NHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTG 696
Query: 266 FFMQ 269
+FMQ
Sbjct: 697 YFMQ 700
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 195 bits (496), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/236 (49%), Positives = 138/236 (58%), Gaps = 43/236 (18%)
Query: 3 LHPIVIETLMSGDEL---------RTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADN 53
+ P ETLM EL DL L S MA D + + SC
Sbjct: 528 MDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASC-------- 579
Query: 54 LDPIAALCQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHL 113
YN + + L T ++ + Q RP EAKKAAD+AKMRFAHIDGDHL
Sbjct: 580 ---------DYNCSNEV-----LSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHL 625
Query: 114 TLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDY 173
TLLNVYHAFKQN E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R ST+FTS+DY
Sbjct: 626 TLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDY 685
Query: 174 YINIRKSLVTGFFMQL---------IIVLAYPISSL-PTVSLDQEDPQWC-YDNFV 218
YINIRK+LVTG+FMQ+ + V + L P+ LD + P+W Y+ FV
Sbjct: 686 YINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHK-PEWVLYNEFV 740
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/64 (81%), Positives = 58/64 (90%)
Query: 206 DQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTG 265
+ E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R ST+FTS+DYYINIRK+LVTG
Sbjct: 637 NHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTG 696
Query: 266 FFMQ 269
+FMQ
Sbjct: 697 YFMQ 700
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 195 bits (495), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/236 (49%), Positives = 138/236 (58%), Gaps = 43/236 (18%)
Query: 3 LHPIVIETLMSGDEL---------RTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADN 53
+ P ETLM EL DL L S MA D + + SC
Sbjct: 528 MDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASC-------- 579
Query: 54 LDPIAALCQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHL 113
YN + + L T ++ + Q RP EAKKAAD+AKMRFAHIDGDHL
Sbjct: 580 ---------DYNCSNEV-----LSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHL 625
Query: 114 TLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDY 173
TLLNVYHAFKQN E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R ST+FTS+DY
Sbjct: 626 TLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDY 685
Query: 174 YINIRKSLVTGFFMQL---------IIVLAYPISSL-PTVSLDQEDPQWC-YDNFV 218
YINIRK+LVTG+FMQ+ + V + L P+ LD + P+W Y+ FV
Sbjct: 686 YINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHK-PEWVLYNEFV 740
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/64 (81%), Positives = 58/64 (90%)
Query: 206 DQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTG 265
+ E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R ST+FTS+DYYINIRK+LVTG
Sbjct: 637 NHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTG 696
Query: 266 FFMQ 269
+FMQ
Sbjct: 697 YFMQ 700
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 182 bits (462), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/154 (57%), Positives = 114/154 (74%), Gaps = 12/154 (7%)
Query: 76 LQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDN 135
L T ++ + Q RPNE + AD+AK RFAHIDGDHLTLLNVYH+FKQNQEDPQWCYDN
Sbjct: 532 LSITAMLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDN 591
Query: 136 FVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL------ 189
F+NYR++K+AD VR QLSR+MD++NL+R ST+F S+DYY+NIRK+LV GFFMQ+
Sbjct: 592 FINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERS 651
Query: 190 ---IIVLAYPISSL-PTVSLDQEDPQWC-YDNFV 218
+ V + +L P+ LD + P+W Y+ FV
Sbjct: 652 GHYVTVKDNQLVNLHPSTVLDHK-PEWALYNEFV 684
Score = 114 bits (285), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 63/76 (82%)
Query: 206 DQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTG 265
+QEDPQWCYDNF+NYR++K+AD VR QLSR+MD++NL+R ST+F S+DYY+NIRK+LV G
Sbjct: 581 NQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAG 640
Query: 266 FFMQDYYINIRKSLVT 281
FFMQ ++ VT
Sbjct: 641 FFMQVAHLERSGHYVT 656
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 73/100 (73%), Positives = 88/100 (88%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP EA+KAAD+AK RF HIDGDHLTLLNVYHA+KQN EDP WC++NFVN R++KSADNVR
Sbjct: 533 RPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVR 592
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
QQL RIM RFNLK ST+F S+DYY+NIRK+++ G+FMQ+
Sbjct: 593 QQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQV 632
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 55/64 (85%)
Query: 206 DQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTG 265
+ EDP WC++NFVN R++KSADNVRQQL RIM RFNLK ST+F S+DYY+NIRK+++ G
Sbjct: 568 NNEDPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAG 627
Query: 266 FFMQ 269
+FMQ
Sbjct: 628 YFMQ 631
>sp|O17438|DHX15_STRPU Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
(Fragment) OS=Strongylocentrotus purpuratus GN=PRP1 PE=2
SV=1
Length = 455
Score = 167 bits (423), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 76/100 (76%), Positives = 86/100 (86%)
Query: 76 LQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDN 135
L T ++ + Q RPNEAKK AD+AKMRFAHIDGDHLTLLNVYHAFKQN EDPQWCYDN
Sbjct: 356 LSVTAMLSVPQCFLRPNEAKKLADEAKMRFAHIDGDHLTLLNVYHAFKQNNEDPQWCYDN 415
Query: 136 FVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYI 175
F+ YRSLKSAD+VRQQL+RIMDRF L+R+ST F SKDYY+
Sbjct: 416 FIQYRSLKSADSVRQQLARIMDRFALQRTSTNFNSKDYYL 455
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 45/49 (91%)
Query: 208 EDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYI 256
EDPQWCYDNF+ YRSLKSAD+VRQQL+RIMDRF L+R+ST F SKDYY+
Sbjct: 407 EDPQWCYDNFIQYRSLKSADSVRQQLARIMDRFALQRTSTNFNSKDYYL 455
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 74/100 (74%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP + + AD AK F H DGDHLT+LNVYH+FK+N EDP WCYDNF+N+R++K AD+VR
Sbjct: 529 RPKDNRIEADSAKKSFDHFDGDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRAIKQADSVR 588
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
QL+RI+ RF L S + SK YY NI+K + GFFMQ+
Sbjct: 589 SQLARILTRFKLPLVSGDVNSKFYYENIKKCIAAGFFMQV 628
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 46/62 (74%)
Query: 208 EDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
EDP WCYDNF+N+R++K AD+VR QL+RI+ RF L S + SK YY NI+K + GFF
Sbjct: 566 EDPTWCYDNFLNHRAIKQADSVRSQLARILTRFKLPLVSGDVNSKFYYENIKKCIAAGFF 625
Query: 268 MQ 269
MQ
Sbjct: 626 MQ 627
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 83/114 (72%)
Query: 76 LQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDN 135
L T L+ + RPN A+K AD+ + +F H DGDHLTLLNVYHA+K + WC+++
Sbjct: 525 LSLTALLSVPNVFVRPNSARKLADEMRQQFTHPDGDHLTLLNVYHAYKSGEGTADWCWNH 584
Query: 136 FVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
F+++R+L SADNVR+QL R M+R ++ ST F K+YY+NIR++LV+GFFMQ+
Sbjct: 585 FLSHRALISADNVRKQLRRTMERQEVELISTPFDDKNYYVNIRRALVSGFFMQV 638
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 57/88 (64%), Gaps = 8/88 (9%)
Query: 212 WCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ-- 269
WC+++F+++R+L SADNVR+QL R M+R ++ ST F K+YY+NIR++LV+GFFMQ
Sbjct: 580 WCWNHFLSHRALISADNVRKQLRRTMERQEVELISTPFDDKNYYVNIRRALVSGFFMQVA 639
Query: 270 ------DYYINIRKSLVTGFFMQCLLGI 291
Y+ ++ + V C L +
Sbjct: 640 KKSANGKNYVTMKDNQVVSLHPSCGLSV 667
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 80/104 (76%), Gaps = 4/104 (3%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDP----QWCYDNFVNYRSLKSA 145
RP + KK ADDAK FAH DGDH+TLLNVYHAFK ++ +WC D+++NYRSL +A
Sbjct: 557 RPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAA 616
Query: 146 DNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
DN+R QL R+M+R+NL+ ++T++ S Y+ NIRK+L +GFFMQ+
Sbjct: 617 DNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQV 660
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 55/74 (74%), Gaps = 3/74 (4%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQD 270
+WC D+++NYRSL +ADN+R QL R+M+R+NL+ ++T++ S Y+ NIRK+L +GFFMQ
Sbjct: 601 KWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQ- 659
Query: 271 YYINIRKSLVTGFF 284
+ ++S G+
Sbjct: 660 --VAKKRSGAKGYI 671
>sp|Q28EN2|SPCS_XENTR O-phosphoseryl-tRNA(Sec) selenium transferase OS=Xenopus tropicalis
GN=sepsecs PE=2 SV=1
Length = 506
Score = 121 bits (304), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 72/89 (80%)
Query: 2 SLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALC 61
P+VIE ++ GDELRTDL ++E+++ LG++NI+CV +TTSCFAPRV D ++ +A +C
Sbjct: 183 GFEPVVIENVLEGDELRTDLDAVEAKITELGAENILCVHSTTSCFAPRVPDRVEELAVIC 242
Query: 62 QRYNIPHVINNAYGLQSTRLMKLIQEAAR 90
++Y IPHV+NNAYG+QS++ M LIQ+ AR
Sbjct: 243 KKYEIPHVVNNAYGVQSSKCMHLIQQGAR 271
>sp|Q9HD40|SPCS_HUMAN O-phosphoseryl-tRNA(Sec) selenium transferase OS=Homo sapiens
GN=SEPSECS PE=1 SV=2
Length = 501
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 69/89 (77%)
Query: 2 SLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALC 61
P+VIE ++ GDELRTDL ++E+++ LG D I+C+ +TTSCFAPRV D L+ +A +C
Sbjct: 183 GFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVIC 242
Query: 62 QRYNIPHVINNAYGLQSTRLMKLIQEAAR 90
Y+IPH++NNAYG+QS++ M LIQ+ AR
Sbjct: 243 ANYDIPHIVNNAYGVQSSKCMHLIQQGAR 271
>sp|Q5RAK7|SPCS_PONAB O-phosphoseryl-tRNA(Sec) selenium transferase OS=Pongo abelii
GN=SEPSECS PE=2 SV=1
Length = 501
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 68/89 (76%)
Query: 2 SLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALC 61
P+VIE ++ GDELRTDL ++E+++ LG D I+C+ +TTSCFAPRV D L+ +A +C
Sbjct: 183 GFEPVVIENVLEGDELRTDLKAVEAKVQELGPDYILCIHSTTSCFAPRVPDRLEELAVIC 242
Query: 62 QRYNIPHVINNAYGLQSTRLMKLIQEAAR 90
Y IPH++NNAYG+QS++ M LIQ+ AR
Sbjct: 243 ANYGIPHIVNNAYGVQSSKCMHLIQQGAR 271
>sp|Q6P6M7|SPCS_MOUSE O-phosphoseryl-tRNA(Sec) selenium transferase OS=Mus musculus
GN=Sepsecs PE=1 SV=2
Length = 504
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 70/89 (78%)
Query: 2 SLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALC 61
P+VIE ++ GDELRTDL ++E+++ LG ++I+C+ +TT+CFAPRV D L+ +A +C
Sbjct: 183 GFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVIC 242
Query: 62 QRYNIPHVINNAYGLQSTRLMKLIQEAAR 90
Y+IPHV+NNAYGLQS++ M LIQ+ AR
Sbjct: 243 ANYDIPHVVNNAYGLQSSKCMHLIQQGAR 271
>sp|Q803A7|SPCS_DANRE O-phosphoseryl-tRNA(Sec) selenium transferase OS=Danio rerio
GN=sepsecs PE=2 SV=1
Length = 490
Score = 110 bits (276), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 67/89 (75%)
Query: 2 SLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALC 61
P+VIE ++ GDELRT+L +E ++ G++N +CV +TTSCFAPRV D L+ ++ LC
Sbjct: 183 GFEPVVIENVLEGDELRTNLEEVERKIEEFGAENTLCVHSTTSCFAPRVPDRLEELSVLC 242
Query: 62 QRYNIPHVINNAYGLQSTRLMKLIQEAAR 90
+++IPH++NNAYG+Q ++ M LIQ+ AR
Sbjct: 243 AKHDIPHIVNNAYGVQPSKCMHLIQQGAR 271
>sp|Q54VQ6|SPCS_DICDI O-phosphoseryl-tRNA(Sec) selenium transferase OS=Dictyostelium
discoideum GN=sepsecs PE=3 SV=1
Length = 479
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 66/89 (74%)
Query: 2 SLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALC 61
L PIVI + GD +RTDLV++E ++ LG DNI+CV +TTSCFAPRV D + I+ +C
Sbjct: 186 GLIPIVIPNQLDGDMIRTDLVAIEDKIKELGVDNILCVFSTTSCFAPRVPDKIIEISEIC 245
Query: 62 QRYNIPHVINNAYGLQSTRLMKLIQEAAR 90
+RYNI H+INNAYGLQ ++++ I +A +
Sbjct: 246 KRYNIGHIINNAYGLQCSKILHNISQACK 274
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 14/134 (10%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP E + AD K +F +GDHLTLLNVY ++K ++ WC++NFV RSL+ A +VR
Sbjct: 963 RPKEKQALADQKKAKFFQPEGDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVR 1022
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL----------IIVLAYPISS 199
+QL IMDR+ L ++ Y I+K++ +GFF +V P+
Sbjct: 1023 KQLITIMDRYKLDI----ISAGRNYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYI 1078
Query: 200 LPTVSLDQEDPQWC 213
P+ +L +P W
Sbjct: 1079 HPSSTLFNRNPDWV 1092
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Query: 212 WCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
WC++NFV RSL+ A +VR+QL IMDR+ L ++ Y I+K++ +GFF
Sbjct: 1004 WCFENFVQARSLRRAQDVRKQLITIMDRYKLDI----ISAGRNYTKIQKAICSGFF 1055
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQ 150
P + AD + +FA +GDH+T+LNV+ F +N +WC D+FVNYR L ADNVR
Sbjct: 543 PYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRS 602
Query: 151 QLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
QL R++ RF +++ S+ + NIR+ LVTGFF Q
Sbjct: 603 QLVRLLKRFEIEKVSSRGLI-NCSENIRQCLVTGFFSQ 639
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 269
+WC D+FVNYR L ADNVR QL R++ RF +++ S+ + NIR+ LVTGFF Q
Sbjct: 582 KWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLI-NCSENIRQCLVTGFFSQ 639
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 71/140 (50%), Gaps = 15/140 (10%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP E + AD + +F +GDHLTLL VY A+K WC++NF+ RSL+ A +VR
Sbjct: 970 RPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVR 1029
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ----------LIIVLAYPISS 199
+QL IMD++ L T+ + IRK++ GFF +V P+
Sbjct: 1030 KQLLSIMDKYKLDV----VTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYI 1085
Query: 200 LPTVSLDQEDPQWC-YDNFV 218
P+ +L Q P W Y + V
Sbjct: 1086 HPSSALFQRQPDWVIYHDLV 1105
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 212 WCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
WC++NF+ RSL+ A +VR+QL IMD++ L T+ + IRK++ GFF
Sbjct: 1011 WCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDV----VTAGKNFTKIRKAITAGFF 1062
>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Sus scrofa GN=DHX16 PE=3 SV=1
Length = 1045
Score = 84.0 bits (206), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP + AD+A++ F GDHL LLNVY + ++ QWCY+NFV +RS++ A +VR
Sbjct: 860 RPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVR 919
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQLIIVLAYPISSL--------- 200
+QL +++R + SS + YI +RK++ G+F + ++
Sbjct: 920 EQLEGLLERVEVGLSSCQGD----YIRVRKAITAGYFYHTARLTRSGYRTVKQQQTVFIH 975
Query: 201 PTVSLDQEDPQW 212
P SL +E P+W
Sbjct: 976 PNSSLFEEQPRW 987
Score = 55.5 bits (132), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
QWCY+NFV +RS++ A +VR+QL +++R + SS + YI +RK++ G+F
Sbjct: 900 QWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGD----YIRVRKAITAGYF 952
>sp|Q18953|SPCS_CAEEL O-phosphoseryl-tRNA(Sec) selenium transferase OS=Caenorhabditis
elegans GN=secs-1 PE=1 SV=1
Length = 481
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 6/125 (4%)
Query: 2 SLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALC 61
PI++E + D L TD+ ++ + G + I+CV+TTTSCFAPR DN++ I+A+C
Sbjct: 177 GFEPIIVEPIRDRDSLITDVETVNRIIEQRG-EEILCVMTTTSCFAPRSPDNVEAISAIC 235
Query: 62 QRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNVYHA 121
+++PH++NNAYGLQS ++ I A F G V A
Sbjct: 236 AAHDVPHLVNNAYGLQSEETIRKIAAAHECGRVDAVVQSLDKNFQVPVGG-----AVIAA 290
Query: 122 FKQNQ 126
FKQN
Sbjct: 291 FKQNH 295
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP + + AD K +F +GDHLTLL VY+++K N+ WCY+NF+ RSL+ A ++R
Sbjct: 1044 RPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIR 1103
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
+Q+ IMDR L S ++ + ++K++ +GFF
Sbjct: 1104 KQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFF 1136
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Query: 212 WCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
WCY+NF+ RSL+ A ++R+Q+ IMDR L S ++ + ++K++ +GFF
Sbjct: 1085 WCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFF 1136
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP + + AD K +F +GDHLTLL VY+++K N+ WCY+NF+ RSL+ A ++R
Sbjct: 1020 RPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIR 1079
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
+Q+ IMDR L S ++ + ++K++ +GFF
Sbjct: 1080 KQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFF 1112
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Query: 212 WCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
WCY+NF+ RSL+ A ++R+Q+ IMDR L S ++ + ++K++ +GFF
Sbjct: 1061 WCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQKAICSGFF 1112
>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Pan troglodytes GN=DHX16 PE=3 SV=1
Length = 1044
Score = 82.4 bits (202), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP + AD+A++ F GDHL LLNVY + ++ QWCY+NFV +RS++ A +VR
Sbjct: 859 RPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVR 918
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQLIIVLAYPISSL--------- 200
+QL +++R + SS + YI +RK++ G+F + ++
Sbjct: 919 EQLEGLLERVEVGLSSCQGD----YIRVRKAITAGYFYHTARLTRSGYRTVKQQQTVFIH 974
Query: 201 PTVSLDQEDPQW 212
P SL ++ P+W
Sbjct: 975 PNSSLFEQQPRW 986
Score = 55.5 bits (132), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
QWCY+NFV +RS++ A +VR+QL +++R + SS + YI +RK++ G+F
Sbjct: 899 QWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGD----YIRVRKAITAGYF 951
>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Homo sapiens GN=DHX16 PE=1 SV=2
Length = 1041
Score = 82.4 bits (202), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP + AD+A++ F GDHL LLNVY + ++ QWCY+NFV +RS++ A +VR
Sbjct: 856 RPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVR 915
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQLIIVLAYPISSL--------- 200
+QL +++R + SS + YI +RK++ G+F + ++
Sbjct: 916 EQLEGLLERVEVGLSSCQGD----YIRVRKAITAGYFYHTARLTRSGYRTVKQQQTVFIH 971
Query: 201 PTVSLDQEDPQW 212
P SL ++ P+W
Sbjct: 972 PNSSLFEQQPRW 983
Score = 55.5 bits (132), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
QWCY+NFV +RS++ A +VR+QL +++R + SS + YI +RK++ G+F
Sbjct: 896 QWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGD----YIRVRKAITAGYF 948
>sp|Q8BZS9|DHX32_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Mus musculus GN=Dhx32 PE=2 SV=2
Length = 744
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 65/106 (61%), Gaps = 7/106 (6%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ---NQEDPQ----WCYDNFVNYRSLK 143
P+ A++AA F H +GDH TL+NVY+A++ N + WC+D F++ +L+
Sbjct: 524 PHGAEEAAVTCWKTFLHPEGDHFTLINVYNAYQDTVLNSANEHCVEMWCHDCFLSCSALR 583
Query: 144 SADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
AD +R +L I+ R L + F SK+ +NI+K+L++G+FMQ+
Sbjct: 584 MADVIRAELLEIIKRIELPYAEPAFGSKENGLNIKKALLSGYFMQI 629
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 39/58 (67%)
Query: 212 WCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 269
WC+D F++ +L+ AD +R +L I+ R L + F SK+ +NI+K+L++G+FMQ
Sbjct: 571 WCHDCFLSCSALRMADVIRAELLEIIKRIELPYAEPAFGSKENGLNIKKALLSGYFMQ 628
>sp|Q61JN8|SPCS_CAEBR O-phosphoseryl-tRNA(Sec) selenium transferase OS=Caenorhabditis
briggsae GN=secs-1 PE=3 SV=1
Length = 482
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 6 IVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALCQRYN 65
I++E D L TD+ ++ + G + ++CV+TTTSCFAPR DN++ I+A+C ++
Sbjct: 181 IIVEPTRDHDALVTDVETVNRIVEQRG-EELLCVMTTTSCFAPRSPDNIEAISAICAAHD 239
Query: 66 IPHVINNAYGLQSTRLMKLIQEA 88
+PH++NNAYGLQS ++ I A
Sbjct: 240 VPHLVNNAYGLQSEETIRKIAAA 262
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP E + AD K +F +GDHLTLL VY+++K + WC++NF+ RS+K A ++R
Sbjct: 995 RPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIR 1054
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
+QL IMDR L S +D ++K++ +GFF
Sbjct: 1055 KQLLGIMDRHKLLMVS---CGRDVS-RVQKAICSGFF 1087
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 212 WCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
WC++NF+ RS+K A ++R+QL IMDR L S +D ++K++ +GFF
Sbjct: 1036 WCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVS---CGRDVS-RVQKAICSGFF 1087
>sp|Q7L7V1|DHX32_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Homo sapiens GN=DHX32 PE=1 SV=1
Length = 743
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 63/106 (59%), Gaps = 7/106 (6%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQED-------PQWCYDNFVNYRSLK 143
P+ A++AA F H +GDH TL+++Y A++ + +WC D F+N +L+
Sbjct: 523 PHGAEEAALTCWKTFLHPEGDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALR 582
Query: 144 SADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
AD +R +L I+ R L + F SK+ +NI+K+L++G+FMQ+
Sbjct: 583 MADVIRAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQI 628
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 269
+WC D F+N +L+ AD +R +L I+ R L + F SK+ +NI+K+L++G+FMQ
Sbjct: 569 KWCRDYFLNCSALRMADVIRAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQ 627
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 51/71 (71%)
Query: 89 ARPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNV 148
+RP E ++ AD + +FA+ + DHLTLLNVY +K N+ WCY++++ R ++ A++V
Sbjct: 965 SRPREKQQEADRQRAQFANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDV 1024
Query: 149 RQQLSRIMDRF 159
R+QL R+MDR+
Sbjct: 1025 RKQLIRLMDRY 1035
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 24/29 (82%)
Query: 212 WCYDNFVNYRSLKSADNVRQQLSRIMDRF 240
WCY++++ R ++ A++VR+QL R+MDR+
Sbjct: 1007 WCYEHYIQARGMRRAEDVRKQLIRLMDRY 1035
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQ 150
P K A +FA +GDHLT+LN+Y AF ++ +D +WC ++F+NY+ L A VR+
Sbjct: 524 PPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVRE 583
Query: 151 QLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
QL +++ +F + R S+E D + + +V+GFF
Sbjct: 584 QLKKLLVKFQVPRKSSE-GDPDLVL---RCIVSGFF 615
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 208 EDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
+D +WC ++F+NY+ L A VR+QL +++ +F + R S+E D + + +V+GFF
Sbjct: 560 KDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSE-GDPDLVL---RCIVSGFF 615
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQ 150
P K A +FA +GDHLT+LNVY AF ++ ++ QWC ++F+NY+ L A VR+
Sbjct: 524 PPNQKSQAIRVHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVRE 583
Query: 151 QLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
QL +++ +F + + S+E + + +V+GFF
Sbjct: 584 QLKKLLVKFQVPKKSSEGDPDP----VLRCIVSGFF 615
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 208 EDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
++ QWC ++F+NY+ L A VR+QL +++ +F + + S+E + + +V+GFF
Sbjct: 560 KNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSEGDPDP----VLRCIVSGFF 615
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP + + AD K +F H GDHLTLLNVY ++Q Q+C NF+++R LK A +V+
Sbjct: 938 RPKDRQLEADSKKAKFHHPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVK 997
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFM 187
Q+S I + LK S + D IRK+ V+GFFM
Sbjct: 998 SQISMIFKKIGLKLISC-HSDPDL---IRKTFVSGFFM 1031
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFM 268
Q+C NF+++R LK A +V+ Q+S I + LK S + D IRK+ V+GFFM
Sbjct: 978 QYCKTNFLHFRHLKRARDVKSQISMIFKKIGLKLISC-HSDPDL---IRKTFVSGFFM 1031
>sp|Q5XH12|DHX32_XENLA Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Xenopus laevis GN=dhx32 PE=2 SV=1
Length = 748
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 63/106 (59%), Gaps = 7/106 (6%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQED-------PQWCYDNFVNYRSLK 143
P EAK+ K +F H +GDH TL+N+Y+ ++Q + + +WC ++ +++ +L+
Sbjct: 525 PPEAKELDLIGKGKFFHPEGDHFTLINIYNEYEQMKRNNASQYDVEKWCQNHCLSFVALE 584
Query: 144 SADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
A +R +L IM R L + F S + NI+KSL++G+FMQ+
Sbjct: 585 MARAIRNELLDIMRRIELPLTGPAFGSDENVTNIKKSLLSGYFMQI 630
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 269
+WC ++ +++ +L+ A +R +L IM R L + F S + NI+KSL++G+FMQ
Sbjct: 571 KWCQNHCLSFVALEMARAIRNELLDIMRRIELPLTGPAFGSDENVTNIKKSLLSGYFMQ 629
>sp|Q3ZBE0|DQX1_BOVIN ATP-dependent RNA helicase DQX1 OS=Bos taurus GN=DQX1 PE=2 SV=1
Length = 719
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 98 ADDAKMRFA--HIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRI 155
A++A +R A H+DGDH +L+ VY AF Q+ D WC +N+ +L A +R +L +
Sbjct: 512 AEEAALRRALEHVDGDHSSLIQVYEAFIQSGADKAWCQARGLNWAALCQARKLRGELLEL 571
Query: 156 MDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
M R L S F S+ +++K+LV+G+F+++
Sbjct: 572 MQRIELPLSQPAFGSERNRRDLQKALVSGYFLKV 605
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 209 DPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFM 268
D WC +N+ +L A +R +L +M R L S F S+ +++K+LV+G+F+
Sbjct: 544 DKAWCQARGLNWAALCQARKLRGELLELMQRIELPLSQPAFGSERNRRDLQKALVSGYFL 603
Query: 269 Q 269
+
Sbjct: 604 K 604
>sp|Q924H9|DQX1_MOUSE ATP-dependent RNA helicase DQX1 OS=Mus musculus GN=Dqx1 PE=2 SV=1
Length = 718
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 97 AADDAKMRFA--HIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSR 154
+A +A +R A H DGDH +L+ VY AF Q+ D WC +N+ SL A +R +L
Sbjct: 509 SAGEAALRRALEHADGDHSSLIQVYEAFVQSGADEAWCQARGLNWESLCQARKLRAELVE 568
Query: 155 IMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
+M R L S F S+ +++K+L++G+F+++
Sbjct: 569 LMQRIELPLSQPAFGSEQNRRDLQKALLSGYFLKV 603
>sp|Q8TE96|DQX1_HUMAN ATP-dependent RNA helicase DQX1 OS=Homo sapiens GN=DQX1 PE=2 SV=2
Length = 717
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 97 AADDAKMRFA--HIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSR 154
+A++A +R A H DGDH +L+ VY AF Q+ D WC +N+ +L A +R +L
Sbjct: 509 SAEEAALRRALEHTDGDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAHKLRGELLE 568
Query: 155 IMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
+M R L S F S+ +++K+LV+G+F+++
Sbjct: 569 LMQRIELPLSLPAFGSEQNRRDLQKALVSGYFLKV 603
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 209 DPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFM 268
D WC +N+ +L A +R +L +M R L S F S+ +++K+LV+G+F+
Sbjct: 542 DEAWCQARGLNWAALCQAHKLRGELLELMQRIELPLSLPAFGSEQNRRDLQKALVSGYFL 601
Query: 269 Q 269
+
Sbjct: 602 K 602
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 15/133 (11%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP AD A+ F GDH+TL+NVY+ ++++ +WC +N+V +R++K A +VR
Sbjct: 822 RPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVR 881
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL----------IIVLAYPISS 199
QL +++R ++ S+ T I IRK++ G+F + + +
Sbjct: 882 DQLVGLLERVEIETKSSTDT-----IKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHP 936
Query: 200 LPTVSLDQEDPQW 212
P L +E P+W
Sbjct: 937 HPNSCLFEETPRW 949
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 5/57 (8%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
+WC +N+V +R++K A +VR QL +++R ++ S+ T I IRK++ G+F
Sbjct: 862 RWCVENYVQHRTMKRARDVRDQLVGLLERVEIETKSSTDT-----IKIRKAITAGYF 913
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP + AAD A+ F H GDHLTL+NV++ ++++ QWC++NF+ +RS+K A +VR
Sbjct: 923 RPKDKAFAADAARKLFFHPQGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVR 982
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
QL +++R + S + D +IRK + +GFF
Sbjct: 983 DQLELLLERVEIPLVS----NVDDTDSIRKCIASGFF 1015
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
QWC++NF+ +RS+K A +VR QL +++R + S + D +IRK + +GFF
Sbjct: 963 QWCFENFIQHRSMKRAQDVRDQLELLLERVEIPLVS----NVDDTDSIRKCIASGFF 1015
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP E +K AD A+ +F DHLTLLNV+ ++ N WC +FV Y+SL A ++R
Sbjct: 820 RPKERQKEADIARNKFFIAKSDHLTLLNVFEQWRANNFSSHWCNKHFVQYKSLVRARDIR 879
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
QL I+ + S + KD+ I I+K + +GF Q
Sbjct: 880 DQLLTILKSQKIPVIS---SGKDWDI-IKKCICSGFAHQ 914
Score = 35.0 bits (79), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 269
WC +FV Y+SL A ++R QL I+ + S + KD+ I I+K + +GF Q
Sbjct: 860 HWCNKHFVQYKSLVRARDIRDQLLTILKSQKIPVIS---SGKDWDI-IKKCICSGFAHQ 914
>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp16 PE=3 SV=2
Length = 1173
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP E + +D A+ +F + DHL LLN+Y +++N WC +F++ ++LK A ++R
Sbjct: 946 RPKERAEESDAAREKFNVPESDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIR 1005
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
QQL IM + + S D+ I +R+ L + +F Q
Sbjct: 1006 QQLVEIMSKQKISLESV----SDWDI-VRRVLCSAYFHQ 1039
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 212 WCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ-- 269
WC +F++ ++LK A ++RQQL IM + + S D+ I +R+ L + +F Q
Sbjct: 987 WCSKHFLHSKTLKRARDIRQQLVEIMSKQKISLESV----SDWDI-VRRVLCSAYFHQAA 1041
Query: 270 -----DYYINIRKSLVTGFFMQCLLGIIGF 294
Y+++R + + L +G+
Sbjct: 1042 CAKGIGEYVHLRSGMPCHLHVTSSLYGLGY 1071
>sp|Q8TXK0|SPCS_METKA O-phosphoseryl-tRNA(Sec) selenium transferase OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=spcS PE=3 SV=1
Length = 431
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 7 VIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALCQRYNI 66
V++T + GD + D +E + S++ VL+T + F PR +D L IA LC+ Y +
Sbjct: 175 VVDTEIEGDRIVVDPGDVEEALER--SESPAAVLSTLTFFPPRSSDPLPEIAELCEEYGV 232
Query: 67 PHVINNAYGLQSTRLMKLIQEA 88
PHV+N AYG+Q + L+ A
Sbjct: 233 PHVVNAAYGIQHEQYRDLLNRA 254
>sp|Q58027|SPCS_METJA O-phosphoseryl-tRNA(Sec) selenium transferase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=spcS PE=1 SV=1
Length = 434
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 7 VIETLMSGDELRTDLVSLESQM-ATLGSDNIVCVLTTTSCFAPRVADNLDPIAALCQRYN 65
++ET++ GD ++ ++ +E + + +N VL+T + F PR +D++ IA +CQ Y+
Sbjct: 181 LVETVLDGDIVKVEVSDIEDAIRKEINENNNPVVLSTLTFFPPRKSDDIKEIAKICQDYD 240
Query: 66 IPHVINNAYGLQSTRLMKLIQEAAR 90
IPH+IN AY +Q+ ++ +++A +
Sbjct: 241 IPHIINGAYAIQNFYYIEKLKKALK 265
>sp|Q6LZM9|SPCS_METMP O-phosphoseryl-tRNA(Sec) selenium transferase OS=Methanococcus
maripaludis (strain S2 / LL) GN=spcS PE=1 SV=1
Length = 436
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 54/85 (63%), Gaps = 5/85 (5%)
Query: 7 VIETLMSGDELRTDLVSLESQMAT---LGSDNIVCVLTTTSCFAPRVADNLDPIAALCQR 63
++ET++ GD + + +E+ + LG N CVL+T + F PR +D++ IA +C+
Sbjct: 182 LVETVLDGDRVYVPVEDIENAIKKEIELG--NRPCVLSTLTFFPPRNSDDIVEIAKICEN 239
Query: 64 YNIPHVINNAYGLQSTRLMKLIQEA 88
Y+IPH+IN AY +Q+ ++ +++A
Sbjct: 240 YDIPHIINGAYAIQNNYYLEKLKKA 264
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP ++ AD K +F + DHLT LNVY ++ ++ +WC DN+++ ++LK VR
Sbjct: 896 RPKGREEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVR 955
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
QL IM L S ++ I +RK + + +F
Sbjct: 956 AQLKEIMQDLKLPLIS---NGSEWDI-VRKCICSAYF 988
Score = 35.8 bits (81), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ- 269
+WC DN+++ ++LK VR QL IM L S ++ I +RK + + +F
Sbjct: 936 KWCADNYLHVKALKKVREVRAQLKEIMQDLKLPLIS---NGSEWDI-VRKCICSAYFHNA 991
Query: 270 ------DYYINIRKSLVTGFFMQCLLGIIGF 294
Y+N+R + L +GF
Sbjct: 992 ARLKGIGEYVNVRTGIPCFLHPTSALFGMGF 1022
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP + AD A+ F GDHLTLL++++ + W +NF+ Y+SL A +VR
Sbjct: 875 RPKDKIMEADKARANFTQPGGDHLTLLHIWNEWVDTDFSYNWARENFLQYKSLCRARDVR 934
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
QL+ + +R ++ + S D I+K++ G+F
Sbjct: 935 DQLANLCERVEIELVTNSSESLD---PIKKAITAGYF 968
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 212 WCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
W +NF+ Y+SL A +VR QL+ + +R ++ + S D I+K++ G+F
Sbjct: 916 WARENFLQYKSLCRARDVRDQLANLCERVEIELVTNSSESLD---PIKKAITAGYF 968
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 11/121 (9%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQED--PQWCYDNFVNYRSLKSADNV 148
P E + A +A+++F H +GD LT LN + ++ D QWC NF+N R+LK+ ++
Sbjct: 551 PQEKRDEAIEARLKFLHSEGDLLTCLNALRQYLESSHDSRKQWCSQNFINRRALKTILDI 610
Query: 149 RQQLSR--IMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQLIIVLAYPISSLPTVSLD 206
R+QL + D + L SS E S+ N+ S ++G+ L +P S T+ +
Sbjct: 611 RKQLREHCLKDGWELN-SSPEVNSE----NLLLSFLSGYITN--TALLHPDGSYRTIIGN 663
Query: 207 Q 207
Q
Sbjct: 664 Q 664
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSR--IMDRFNLKRSSTEFTSKDYYINIRKSLVT 264
QWC NF+N R+LK+ ++R+QL + D + L SS E S++ ++ +T
Sbjct: 592 QWCSQNFINRRALKTILDIRKQLREHCLKDGWELN-SSPEVNSENLLLSFLSGYIT 646
>sp|Q9HE06|YK99_SCHPO Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
C20H4.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPAC20H4.09 PE=3 SV=1
Length = 647
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 94 AKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLS 153
+K A A F +GD +T LNV+ +F N++D QWC N++NY++L+ A ++R L
Sbjct: 488 SKNDAFVAHSSFFANEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTHLV 547
Query: 154 RIMDRFNLKRSSTEFTSKDYYINIRKSLVTGF 185
R +++F++ ++ S D I K L+ GF
Sbjct: 548 RFLNKFSIP-TAQRLPSSDCS-KILKCLLDGF 577
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 206 DQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTG 265
+++D QWC N++NY++L+ A ++R L R +++F++ ++ S D I K L+ G
Sbjct: 519 NKKDLQWCRKNYLNYQTLRQALDIRTHLVRFLNKFSIP-TAQRLPSSDCS-KILKCLLDG 576
Query: 266 F 266
F
Sbjct: 577 F 577
>sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33
PE=1 SV=2
Length = 707
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQ 150
P ++ + +F +GDH+TLLN+Y FK + WC +NFVN +++ VR
Sbjct: 538 PPSRREEVQGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRA 597
Query: 151 QLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFM 187
QL I LK S +S+ ++R+ L FM
Sbjct: 598 QLRDIC----LKMSMPIASSRGDVESVRRCLAHSLFM 630
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 212 WCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFM 268
WC +NFVN +++ VR QL I LK S +S+ ++R+ L FM
Sbjct: 578 WCKENFVNSKNMTLVAEVRAQLRDIC----LKMSMPIASSRGDVESVRRCLAHSLFM 630
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP ++ +D + +FA + DHLT LNVY +K N WC D+F++ ++++ VR
Sbjct: 986 RPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVR 1045
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
QL IM + +R S D+ I +RK + +F Q
Sbjct: 1046 AQLKDIMVQ---QRMSLASCGTDWDI-VRKCICAAYFHQ 1080
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Query: 212 WCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ-- 269
WC D+F++ ++++ VR QL IM + +R S D+ I +RK + +F Q
Sbjct: 1027 WCNDHFIHAKAMRKVREVRAQLKDIMVQ---QRMSLASCGTDWDI-VRKCICAAYFHQAA 1082
Query: 270 -----DYYINIRKSL 279
Y+NIR +
Sbjct: 1083 KLKGIGEYVNIRTGM 1097
>sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33
PE=1 SV=1
Length = 698
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQ 150
P + + +F +GDH+TLLN+Y FK + WC +NFVN +++ VR
Sbjct: 529 PPARRDEVQSVRKKFISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRA 588
Query: 151 QLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFM 187
QL I LK S +S+ ++R+ + FM
Sbjct: 589 QLREIC----LKMSMPIMSSRGDMESVRRCMAHSLFM 621
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 212 WCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFM 268
WC +NFVN +++ VR QL I LK S +S+ ++R+ + FM
Sbjct: 569 WCKENFVNSKNMLLVAEVRAQLREIC----LKMSMPIMSSRGDMESVRRCMAHSLFM 621
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,887,108
Number of Sequences: 539616
Number of extensions: 3538924
Number of successful extensions: 12298
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 12150
Number of HSP's gapped (non-prelim): 156
length of query: 294
length of database: 191,569,459
effective HSP length: 116
effective length of query: 178
effective length of database: 128,974,003
effective search space: 22957372534
effective search space used: 22957372534
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 61 (28.1 bits)