Your job contains 1 sequence.
>psy2072
MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAAL
CQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNVYH
AFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKS
LVTGFFMQLIIVLAYPISSLPTVSLDQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRF
NLKRSSTEFTSKDYYINIRKSLVTGFFMQDYYINIRKSLVTGFFMQCLLGIIGF
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2072
(294 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 494 5.9e-47 1
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 484 1.2e-45 1
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 484 1.6e-45 1
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 484 1.6e-45 1
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 484 1.6e-45 1
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 484 1.6e-45 1
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 484 1.6e-45 1
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 484 1.6e-45 1
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 480 3.6e-45 1
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 448 2.1e-43 2
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 448 2.1e-43 2
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 419 1.4e-38 1
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 416 3.0e-38 1
TAIR|locus:2147785 - symbol:AT5G14900 species:3702 "Arabi... 351 1.0e-34 2
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 324 5.2e-30 2
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 327 1.6e-28 1
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 323 3.8e-28 1
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 304 6.1e-28 2
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 318 1.5e-27 1
UNIPROTKB|F1NHJ1 - symbol:SEPSECS "Uncharacterized protei... 288 6.6e-25 1
UNIPROTKB|E1BPY3 - symbol:SEPSECS "Uncharacterized protei... 281 4.5e-24 1
UNIPROTKB|I3LC71 - symbol:LOC100623300 "Uncharacterized p... 278 9.5e-24 1
UNIPROTKB|I3L9M2 - symbol:LOC100623300 "Uncharacterized p... 278 9.8e-24 1
UNIPROTKB|Q9HD40 - symbol:SEPSECS "O-phosphoseryl-tRNA(Se... 277 1.2e-23 1
UNIPROTKB|E2R3S6 - symbol:SEPSECS "Uncharacterized protei... 277 1.3e-23 1
UNIPROTKB|J9NRL3 - symbol:SEPSECS "Uncharacterized protei... 277 1.3e-23 1
MGI|MGI:1098791 - symbol:Sepsecs "Sep (O-phosphoserine) t... 276 1.6e-23 1
ZFIN|ZDB-GENE-040426-859 - symbol:sepsecs "Sep (O-phospho... 259 1.1e-21 1
DICTYBASE|DDB_G0280197 - symbol:sepsecs "O-phosphoseryl-t... 257 1.7e-21 1
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 261 2.0e-21 1
WB|WBGene00022056 - symbol:Y67D2.6 species:6239 "Caenorha... 217 9.8e-17 1
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 209 1.4e-14 1
UNIPROTKB|Q5JP46 - symbol:DHX16 "Putative pre-mRNA-splici... 199 1.8e-14 2
UNIPROTKB|Q5SQH5 - symbol:DHX16 "Putative pre-mRNA-splici... 199 1.8e-14 2
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 207 3.0e-14 1
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 207 3.1e-14 1
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 207 3.1e-14 1
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 207 3.1e-14 1
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 207 3.1e-14 1
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 207 3.2e-14 1
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 207 3.2e-14 1
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 207 3.2e-14 1
WB|WBGene00008379 - symbol:secs-1 species:6239 "Caenorhab... 202 3.6e-14 1
UNIPROTKB|Q18953 - symbol:secs-1 "O-phosphoseryl-tRNA(Sec... 202 3.6e-14 1
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 206 4.1e-14 1
FB|FBgn0037347 - symbol:CG1427 species:7227 "Drosophila m... 200 6.4e-14 1
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 204 8.5e-14 1
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 199 1.2e-13 2
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 200 1.3e-13 1
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 201 2.3e-13 1
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 200 2.4e-13 1
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 200 2.4e-13 1
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 200 2.4e-13 1
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 200 2.4e-13 1
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 200 2.8e-13 1
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 200 3.0e-13 1
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 196 3.4e-13 2
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 199 4.1e-13 1
WB|WBGene00022433 - symbol:Y108F1.5 species:6239 "Caenorh... 186 1.4e-12 1
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 191 2.8e-12 1
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 190 4.7e-12 1
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 190 5.0e-12 1
UNIPROTKB|A7MBI4 - symbol:DHX32 "DHX32 protein" species:9... 187 6.6e-12 1
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 187 1.0e-11 1
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 187 1.1e-11 1
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 188 1.1e-11 1
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 188 1.1e-11 1
ASPGD|ASPL0000052850 - symbol:AN1363 species:162425 "Emer... 182 1.3e-11 2
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 184 1.4e-11 1
UNIPROTKB|F1PER1 - symbol:DHX32 "Uncharacterized protein"... 184 1.5e-11 1
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 189 1.9e-11 2
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 189 1.9e-11 2
MGI|MGI:2141813 - symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) bo... 183 2.0e-11 1
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 185 2.1e-11 1
UNIPROTKB|F5GXM6 - symbol:DHX35 "Probable ATP-dependent R... 181 3.0e-11 1
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 181 3.0e-11 1
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 181 3.2e-11 1
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 183 3.7e-11 1
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 179 5.8e-11 1
UNIPROTKB|F1SDM5 - symbol:DHX32 "Uncharacterized protein"... 179 6.1e-11 1
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 178 6.9e-11 1
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 178 7.3e-11 1
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 180 7.5e-11 1
UNIPROTKB|Q7L7V1 - symbol:DHX32 "Putative pre-mRNA-splici... 178 7.9e-11 1
UNIPROTKB|H0Y9D2 - symbol:SEPSECS "O-phosphoseryl-tRNA(Se... 154 9.0e-11 1
UNIPROTKB|E2RQN1 - symbol:DHX35 "Uncharacterized protein"... 177 9.6e-11 1
UNIPROTKB|E2RQN7 - symbol:DHX35 "Uncharacterized protein"... 177 9.7e-11 1
UNIPROTKB|E1C4U5 - symbol:DHX35 "Uncharacterized protein"... 177 9.7e-11 1
RGD|1311740 - symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box po... 173 3.1e-10 1
FB|FBgn0032194 - symbol:CG4901 species:7227 "Drosophila m... 171 4.8e-10 1
UNIPROTKB|I3LG93 - symbol:DQX1 "Uncharacterized protein" ... 162 6.5e-10 1
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 169 8.7e-10 1
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 167 2.3e-09 1
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 167 2.3e-09 1
UNIPROTKB|F1NH89 - symbol:LOC768812 "Uncharacterized prot... 165 2.7e-09 1
UNIPROTKB|Q3ZBE0 - symbol:DQX1 "ATP-dependent RNA helicas... 162 5.6e-09 1
MGI|MGI:2136388 - symbol:Dqx1 "DEAQ RNA-dependent ATPase"... 161 7.2e-09 1
UNIPROTKB|Q8TE96 - symbol:DQX1 "ATP-dependent RNA helicas... 160 9.5e-09 1
UNIPROTKB|E2QXW1 - symbol:DQX1 "Uncharacterized protein" ... 159 1.2e-08 1
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 159 2.1e-08 1
WARNING: Descriptions of 42 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 494 (179.0 bits), Expect = 5.9e-47, P = 5.9e-47
Identities = 118/227 (51%), Positives = 149/227 (65%)
Query: 3 LHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALCQ 62
+ P ETLM EL L +L+ G+ + + + P++A L IA+ CQ
Sbjct: 461 MDPPAPETLMRALELLNYLAALDDD----GNLTDLGAVMSEFPLDPQLAKML--IAS-CQ 513
Query: 63 RYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAF 122
H +N L T ++ + Q RPNEAKKAAD+AKMRFAHIDGDHLTLLNVYHAF
Sbjct: 514 -----HNCSNEI-LSITAMLSVPQCFVRPNEAKKAADEAKMRFAHIDGDHLTLLNVYHAF 567
Query: 123 KQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLV 182
KQ+ EDP WCY+NF+N+RSLKSADNVRQQL+RIMDRFNL+R+STEFTSKDYY+NIRK+LV
Sbjct: 568 KQSSEDPNWCYENFINFRSLKSADNVRQQLARIMDRFNLRRTSTEFTSKDYYVNIRKALV 627
Query: 183 TGFFMQLIIV--LAYPIS-------SL-PTVSLDQEDPQWC-YDNFV 218
GFFMQ+ + Y ++ L P+ LD + P W Y+ FV
Sbjct: 628 QGFFMQVAHLERTGYYLTIKDNQNVQLHPSTCLDHK-PDWVIYNEFV 673
Score = 295 (108.9 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 52/62 (83%), Positives = 60/62 (96%)
Query: 208 EDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
EDP WCY+NF+N+RSLKSADNVRQQL+RIMDRFNL+R+STEFTSKDYY+NIRK+LV GFF
Sbjct: 572 EDPNWCYENFINFRSLKSADNVRQQLARIMDRFNLRRTSTEFTSKDYYVNIRKALVQGFF 631
Query: 268 MQ 269
MQ
Sbjct: 632 MQ 633
Score = 37 (18.1 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 5/6 (83%), Positives = 5/6 (83%)
Query: 129 PQWCYD 134
PQWC D
Sbjct: 106 PQWCVD 111
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 484 (175.4 bits), Expect = 1.2e-45, P = 1.2e-45
Identities = 117/229 (51%), Positives = 143/229 (62%)
Query: 3 LHPIVIETLMSGDELRTDLVSL--ESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAAL 60
+ P ETLM EL L +L + + LGS + P++A + A
Sbjct: 495 MDPPAPETLMRALELLNYLAALNDDGDLTELGS------MMAEFPLDPQLAKM---VIAS 545
Query: 61 CQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNVYH 120
C YN + + L T ++ + Q RP EAKKAAD+AKMRFAHIDGDHLTLLNVYH
Sbjct: 546 CD-YNCSNEV-----LSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYH 599
Query: 121 AFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKS 180
AFKQN E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R ST+FTS+DYYINIRK+
Sbjct: 600 AFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKA 659
Query: 181 LVTGFFMQL---------IIVLAYPISSL-PTVSLDQEDPQWC-YDNFV 218
LVTG+FMQ+ + V + L P+ LD + P+W Y+ FV
Sbjct: 660 LVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHK-PEWVLYNEFV 707
Score = 284 (105.0 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 52/64 (81%), Positives = 58/64 (90%)
Query: 206 DQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTG 265
+ E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R ST+FTS+DYYINIRK+LVTG
Sbjct: 604 NHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTG 663
Query: 266 FFMQ 269
+FMQ
Sbjct: 664 YFMQ 667
Score = 40 (19.1 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 22/72 (30%), Positives = 31/72 (43%)
Query: 66 IPHVINNAYGLQST-RLMKLIQEAAR-PN-EAKKAADDAKMRFAHIDGDHLTLLNVYHAF 122
IPH IN L T R ++++ + P E K+ D +R H L+ +
Sbjct: 78 IPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDILIR--H---QSFVLVGETGSG 132
Query: 123 KQNQEDPQWCYD 134
K Q PQWC D
Sbjct: 133 KTTQI-PQWCVD 143
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 484 (175.4 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 117/229 (51%), Positives = 143/229 (62%)
Query: 3 LHPIVIETLMSGDELRTDLVSL--ESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAAL 60
+ P ETLM EL L +L + + LGS + P++A + A
Sbjct: 528 MDPPAPETLMRALELLNYLAALNDDGDLTELGS------MMAEFPLDPQLAKM---VIAS 578
Query: 61 CQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNVYH 120
C YN + + L T ++ + Q RP EAKKAAD+AKMRFAHIDGDHLTLLNVYH
Sbjct: 579 CD-YNCSNEV-----LSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYH 632
Query: 121 AFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKS 180
AFKQN E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R ST+FTS+DYYINIRK+
Sbjct: 633 AFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKA 692
Query: 181 LVTGFFMQL---------IIVLAYPISSL-PTVSLDQEDPQWC-YDNFV 218
LVTG+FMQ+ + V + L P+ LD + P+W Y+ FV
Sbjct: 693 LVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHK-PEWVLYNEFV 740
Score = 284 (105.0 bits), Expect = 7.3e-24, P = 7.3e-24
Identities = 52/64 (81%), Positives = 58/64 (90%)
Query: 206 DQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTG 265
+ E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R ST+FTS+DYYINIRK+LVTG
Sbjct: 637 NHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTG 696
Query: 266 FFMQ 269
+FMQ
Sbjct: 697 YFMQ 700
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 484 (175.4 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 117/229 (51%), Positives = 143/229 (62%)
Query: 3 LHPIVIETLMSGDELRTDLVSL--ESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAAL 60
+ P ETLM EL L +L + + LGS + P++A + A
Sbjct: 528 MDPPAPETLMRALELLNYLAALNDDGDLTELGS------MMAEFPLDPQLAKM---VIAS 578
Query: 61 CQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNVYH 120
C YN + + L T ++ + Q RP EAKKAAD+AKMRFAHIDGDHLTLLNVYH
Sbjct: 579 CD-YNCSNEV-----LSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYH 632
Query: 121 AFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKS 180
AFKQN E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R ST+FTS+DYYINIRK+
Sbjct: 633 AFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKA 692
Query: 181 LVTGFFMQL---------IIVLAYPISSL-PTVSLDQEDPQWC-YDNFV 218
LVTG+FMQ+ + V + L P+ LD + P+W Y+ FV
Sbjct: 693 LVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHK-PEWVLYNEFV 740
Score = 284 (105.0 bits), Expect = 7.3e-24, P = 7.3e-24
Identities = 52/64 (81%), Positives = 58/64 (90%)
Query: 206 DQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTG 265
+ E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R ST+FTS+DYYINIRK+LVTG
Sbjct: 637 NHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTG 696
Query: 266 FFMQ 269
+FMQ
Sbjct: 697 YFMQ 700
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 484 (175.4 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 117/229 (51%), Positives = 143/229 (62%)
Query: 3 LHPIVIETLMSGDELRTDLVSL--ESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAAL 60
+ P ETLM EL L +L + + LGS + P++A + A
Sbjct: 528 MDPPAPETLMRALELLNYLAALNDDGDLTELGS------MMAEFPLDPQLAKM---VIAS 578
Query: 61 CQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNVYH 120
C YN + + L T ++ + Q RP EAKKAAD+AKMRFAHIDGDHLTLLNVYH
Sbjct: 579 CD-YNCSNEV-----LSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYH 632
Query: 121 AFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKS 180
AFKQN E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R ST+FTS+DYYINIRK+
Sbjct: 633 AFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKA 692
Query: 181 LVTGFFMQL---------IIVLAYPISSL-PTVSLDQEDPQWC-YDNFV 218
LVTG+FMQ+ + V + L P+ LD + P+W Y+ FV
Sbjct: 693 LVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHK-PEWVLYNEFV 740
Score = 284 (105.0 bits), Expect = 7.3e-24, P = 7.3e-24
Identities = 52/64 (81%), Positives = 58/64 (90%)
Query: 206 DQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTG 265
+ E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R ST+FTS+DYYINIRK+LVTG
Sbjct: 637 NHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTG 696
Query: 266 FFMQ 269
+FMQ
Sbjct: 697 YFMQ 700
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 484 (175.4 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 117/229 (51%), Positives = 143/229 (62%)
Query: 3 LHPIVIETLMSGDELRTDLVSL--ESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAAL 60
+ P ETLM EL L +L + + LGS + P++A + A
Sbjct: 528 MDPPAPETLMRALELLNYLAALNDDGDLTELGS------MMAEFPLDPQLAKM---VIAS 578
Query: 61 CQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNVYH 120
C YN + + L T ++ + Q RP EAKKAAD+AKMRFAHIDGDHLTLLNVYH
Sbjct: 579 CD-YNCSNEV-----LSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYH 632
Query: 121 AFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKS 180
AFKQN E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R ST+FTS+DYYINIRK+
Sbjct: 633 AFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKA 692
Query: 181 LVTGFFMQL---------IIVLAYPISSL-PTVSLDQEDPQWC-YDNFV 218
LVTG+FMQ+ + V + L P+ LD + P+W Y+ FV
Sbjct: 693 LVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHK-PEWVLYNEFV 740
Score = 284 (105.0 bits), Expect = 7.3e-24, P = 7.3e-24
Identities = 52/64 (81%), Positives = 58/64 (90%)
Query: 206 DQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTG 265
+ E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R ST+FTS+DYYINIRK+LVTG
Sbjct: 637 NHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTG 696
Query: 266 FFMQ 269
+FMQ
Sbjct: 697 YFMQ 700
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 484 (175.4 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 117/229 (51%), Positives = 143/229 (62%)
Query: 3 LHPIVIETLMSGDELRTDLVSL--ESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAAL 60
+ P ETLM EL L +L + + LGS + P++A + A
Sbjct: 528 MDPPAPETLMRALELLNYLAALNDDGDLTELGS------MMAEFPLDPQLAKM---VIAS 578
Query: 61 CQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNVYH 120
C YN + + L T ++ + Q RP EAKKAAD+AKMRFAHIDGDHLTLLNVYH
Sbjct: 579 CD-YNCSNEV-----LSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYH 632
Query: 121 AFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKS 180
AFKQN E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R ST+FTS+DYYINIRK+
Sbjct: 633 AFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKA 692
Query: 181 LVTGFFMQL---------IIVLAYPISSL-PTVSLDQEDPQWC-YDNFV 218
LVTG+FMQ+ + V + L P+ LD + P+W Y+ FV
Sbjct: 693 LVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHK-PEWVLYNEFV 740
Score = 284 (105.0 bits), Expect = 7.3e-24, P = 7.3e-24
Identities = 52/64 (81%), Positives = 58/64 (90%)
Query: 206 DQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTG 265
+ E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R ST+FTS+DYYINIRK+LVTG
Sbjct: 637 NHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTG 696
Query: 266 FFMQ 269
+FMQ
Sbjct: 697 YFMQ 700
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 484 (175.4 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 117/229 (51%), Positives = 143/229 (62%)
Query: 3 LHPIVIETLMSGDELRTDLVSL--ESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAAL 60
+ P ETLM EL L +L + + LGS + P++A + A
Sbjct: 528 MDPPAPETLMRALELLNYLAALNDDGDLTELGS------MMAEFPLDPQLAKM---VIAS 578
Query: 61 CQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNVYH 120
C YN + + L T ++ + Q RP EAKKAAD+AKMRFAHIDGDHLTLLNVYH
Sbjct: 579 CD-YNCSNEV-----LSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYH 632
Query: 121 AFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKS 180
AFKQN E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R ST+FTS+DYYINIRK+
Sbjct: 633 AFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKA 692
Query: 181 LVTGFFMQL---------IIVLAYPISSL-PTVSLDQEDPQWC-YDNFV 218
LVTG+FMQ+ + V + L P+ LD + P+W Y+ FV
Sbjct: 693 LVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHK-PEWVLYNEFV 740
Score = 284 (105.0 bits), Expect = 7.3e-24, P = 7.3e-24
Identities = 52/64 (81%), Positives = 58/64 (90%)
Query: 206 DQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTG 265
+ E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R ST+FTS+DYYINIRK+LVTG
Sbjct: 637 NHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTG 696
Query: 266 FFMQ 269
+FMQ
Sbjct: 697 YFMQ 700
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 480 (174.0 bits), Expect = 3.6e-45, P = 3.6e-45
Identities = 116/229 (50%), Positives = 143/229 (62%)
Query: 3 LHPIVIETLMSGDELRTDLVSL--ESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAAL 60
+ P ETLM EL L +L + + LGS + P++A + A
Sbjct: 502 MDPPAPETLMRALELLNYLAALNDDGDLTELGS------MMAEFPLDPQLAKM---VIAS 552
Query: 61 CQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNVYH 120
C +N + + L T ++ + Q RP EAKKAAD++KMRFAHIDGDHLTLLNVYH
Sbjct: 553 CD-FNCSNEV-----LSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYH 606
Query: 121 AFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKS 180
AFKQN E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R STEFTS+DYYINIR++
Sbjct: 607 AFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRRA 666
Query: 181 LVTGFFMQL---------IIVLAYPISSL-PTVSLDQEDPQWC-YDNFV 218
LVTGFFMQ+ + V + L P+ LD + P+W Y+ FV
Sbjct: 667 LVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHK-PEWVLYNEFV 714
Score = 287 (106.1 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 53/64 (82%), Positives = 58/64 (90%)
Query: 206 DQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTG 265
+ E QWCYDNF+NYRSL SADNVRQQLSRIMDRFNL R STEFTS+DYYINIR++LVTG
Sbjct: 611 NHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRRALVTG 670
Query: 266 FFMQ 269
FFMQ
Sbjct: 671 FFMQ 674
Score = 39 (18.8 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 102 KMRFAHIDGDHLTLLNVYHAFK-QNQEDPQWCYD 134
K RF I H + + V + + PQWC D
Sbjct: 117 KERFNDILNRHQSFVLVGETGSGKTTQIPQWCVD 150
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 448 (162.8 bits), Expect = 2.1e-43, Sum P(2) = 2.1e-43
Identities = 88/154 (57%), Positives = 114/154 (74%)
Query: 76 LQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDN 135
L T ++ + Q RPNE + AD+AK RFAHIDGDHLTLLNVYH+FKQNQEDPQWCYDN
Sbjct: 532 LSITAMLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDN 591
Query: 136 FVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL------ 189
F+NYR++K+AD VR QLSR+MD++NL+R ST+F S+DYY+NIRK+LV GFFMQ+
Sbjct: 592 FINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERS 651
Query: 190 ---IIVLAYPISSL-PTVSLDQEDPQWC-YDNFV 218
+ V + +L P+ LD + P+W Y+ FV
Sbjct: 652 GHYVTVKDNQLVNLHPSTVLDHK-PEWALYNEFV 684
Score = 275 (101.9 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 46/64 (71%), Positives = 59/64 (92%)
Query: 206 DQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTG 265
+QEDPQWCYDNF+NYR++K+AD VR QLSR+MD++NL+R ST+F S+DYY+NIRK+LV G
Sbjct: 581 NQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAG 640
Query: 266 FFMQ 269
FFMQ
Sbjct: 641 FFMQ 644
Score = 38 (18.4 bits), Expect = 2.1e-43, Sum P(2) = 2.1e-43
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 17 LRTDLVSLESQMATLGSDNIV 37
LR++L S+ Q+ LG++++V
Sbjct: 447 LRSNLGSVVLQLKKLGTEDLV 467
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 448 (162.8 bits), Expect = 2.1e-43, Sum P(2) = 2.1e-43
Identities = 88/154 (57%), Positives = 114/154 (74%)
Query: 76 LQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDN 135
L T ++ + Q RPNE + AD+AK RFAHIDGDHLTLLNVYH+FKQNQEDPQWCYDN
Sbjct: 532 LSITAMLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDN 591
Query: 136 FVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL------ 189
F+NYR++K+AD VR QLSR+MD++NL+R ST+F S+DYY+NIRK+LV GFFMQ+
Sbjct: 592 FINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERS 651
Query: 190 ---IIVLAYPISSL-PTVSLDQEDPQWC-YDNFV 218
+ V + +L P+ LD + P+W Y+ FV
Sbjct: 652 GHYVTVKDNQLVNLHPSTVLDHK-PEWALYNEFV 684
Score = 275 (101.9 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 46/64 (71%), Positives = 59/64 (92%)
Query: 206 DQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTG 265
+QEDPQWCYDNF+NYR++K+AD VR QLSR+MD++NL+R ST+F S+DYY+NIRK+LV G
Sbjct: 581 NQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAG 640
Query: 266 FFMQ 269
FFMQ
Sbjct: 641 FFMQ 644
Score = 38 (18.4 bits), Expect = 2.1e-43, Sum P(2) = 2.1e-43
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 17 LRTDLVSLESQMATLGSDNIV 37
LR++L S+ Q+ LG++++V
Sbjct: 447 LRSNLGSVVLQLKKLGTEDLV 467
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 419 (152.6 bits), Expect = 1.4e-38, P = 1.4e-38
Identities = 74/100 (74%), Positives = 88/100 (88%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP EA+KAAD+AK RF HI+GDHLTLLNVYHAFKQN EDP WCY+NF+N R++KSADNVR
Sbjct: 529 RPREAQKAADEAKARFGHIEGDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSADNVR 588
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
QQL RIM RFNLK ST+F S+DYYINIRK+++ G+FMQ+
Sbjct: 589 QQLVRIMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFMQV 628
Score = 255 (94.8 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 206 DQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTG 265
+ EDP WCY+NF+N R++KSADNVRQQL RIM RFNLK ST+F S+DYYINIRK+++ G
Sbjct: 564 NNEDPNWCYENFINNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYINIRKAMLAG 623
Query: 266 FFMQ 269
+FMQ
Sbjct: 624 YFMQ 627
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 416 (151.5 bits), Expect = 3.0e-38, P = 3.0e-38
Identities = 73/100 (73%), Positives = 88/100 (88%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP EA+KAAD+AK RF HIDGDHLTLLNVYHA+KQN EDP WC++NFVN R++KSADNVR
Sbjct: 533 RPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVR 592
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
QQL RIM RFNLK ST+F S+DYY+NIRK+++ G+FMQ+
Sbjct: 593 QQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQV 632
Score = 251 (93.4 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 43/64 (67%), Positives = 55/64 (85%)
Query: 206 DQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTG 265
+ EDP WC++NFVN R++KSADNVRQQL RIM RFNLK ST+F S+DYY+NIRK+++ G
Sbjct: 568 NNEDPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAG 627
Query: 266 FFMQ 269
+FMQ
Sbjct: 628 YFMQ 631
>TAIR|locus:2147785 [details] [associations]
symbol:AT5G14900 species:3702 "Arabidopsis thaliana"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0004386
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
KO:K12820 EMBL:AL391146 OMA:IRTVTHI IPI:IPI00537280 PIR:T51435
RefSeq:NP_196994.1 UniGene:At.65514 ProteinModelPortal:Q9LFR5
SMR:Q9LFR5 EnsemblPlants:AT5G14900.1 GeneID:831342
KEGG:ath:AT5G14900 TAIR:At5g14900 InParanoid:Q9LFR5
PhylomeDB:Q9LFR5 ProtClustDB:CLSN2916823 Genevestigator:Q9LFR5
Uniprot:Q9LFR5
Length = 301
Score = 351 (128.6 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 64/101 (63%), Positives = 82/101 (81%)
Query: 90 RPN-EAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNV 148
RP EA+KAAD+AK FAHIDGDHLTLLN++HAF QN +DP WC F+NYR++KSA +V
Sbjct: 99 RPRGEAQKAADEAKSSFAHIDGDHLTLLNLFHAFLQNNQDPNWCCTKFINYRAMKSAVSV 158
Query: 149 RQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
R+QL RIM RF +K S +F S+DYY+NIRK+L+ G+FMQ+
Sbjct: 159 REQLVRIMLRFQIKLCSPDFNSRDYYVNIRKALLAGYFMQV 199
Score = 208 (78.3 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 36/64 (56%), Positives = 50/64 (78%)
Query: 206 DQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTG 265
+ +DP WC F+NYR++KSA +VR+QL RIM RF +K S +F S+DYY+NIRK+L+ G
Sbjct: 135 NNQDPNWCCTKFINYRAMKSAVSVREQLVRIMLRFQIKLCSPDFNSRDYYVNIRKALLAG 194
Query: 266 FFMQ 269
+FMQ
Sbjct: 195 YFMQ 198
Score = 41 (19.5 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYIN 257
+W D +Y L A+ + R+++R KR +E S Y N
Sbjct: 256 EWLVDVAPHYYKL--ANFPSSEAKRVLERHYKKRKLSEERSCKLYSN 300
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 324 (119.1 bits), Expect = 5.2e-30, Sum P(2) = 5.2e-30
Identities = 77/194 (39%), Positives = 113/194 (58%)
Query: 1 MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAP--RVADN--LDP 56
+ L + I+ L+ D + D + E+ M L N + L P R A LDP
Sbjct: 449 LELKKLGIDDLVHFDYM--DPPAPETMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDP 506
Query: 57 -IAALCQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTL 115
+A + R + N L T L+ + RPN A+K AD+ + +F H DGDHLTL
Sbjct: 507 NLAVMLIRSPEFYCSNEVLSL--TALLSVPNVFVRPNSARKLADEMRQQFTHPDGDHLTL 564
Query: 116 LNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYI 175
LNVYHA+K + WC+++F+++R+L SADNVR+QL R M+R ++ ST F K+YY+
Sbjct: 565 LNVYHAYKSGEGTADWCWNHFLSHRALISADNVRKQLRRTMERQEVELISTPFDDKNYYV 624
Query: 176 NIRKSLVTGFFMQL 189
NIR++LV+GFFMQ+
Sbjct: 625 NIRRALVSGFFMQV 638
Score = 181 (68.8 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 32/58 (55%), Positives = 48/58 (82%)
Query: 212 WCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 269
WC+++F+++R+L SADNVR+QL R M+R ++ ST F K+YY+NIR++LV+GFFMQ
Sbjct: 580 WCWNHFLSHRALISADNVRKQLRRTMERQEVELISTPFDDKNYYVNIRRALVSGFFMQ 637
Score = 41 (19.5 bits), Expect = 5.2e-30, Sum P(2) = 5.2e-30
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 210 PQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSS 246
P+W + NY L DN ++ S + + + S
Sbjct: 693 PEWLIELAPNYYDLDDFDNNKEVKSALQKVYQMAARS 729
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 327 (120.2 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 84/196 (42%), Positives = 112/196 (57%)
Query: 1 MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAP--RVADN--LDP 56
+ L + I+ L+ D + D + E+ M L N + L P R+A LDP
Sbjct: 475 LELKKLGIDDLVHFDLM--DPPAPETLMRALEELNYLACLDDDGNLTPLGRLASEFPLDP 532
Query: 57 IAALCQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLL 116
A+ + +N L T L+ + Q RP +K AD+ K FAH DGDHLTLL
Sbjct: 533 ALAVMLISSPEFYCSNEI-LSITALLSVPQIFVRPASQRKRADEMKNLFAHPDGDHLTLL 591
Query: 117 NVYHAFK--QNQEDP-QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDY 173
N YHAFK + QE+P QWC+D+F++ RSL+SADNVR QL RIM+R L+ ST F K Y
Sbjct: 592 NAYHAFKSPEAQENPKQWCHDHFLSLRSLQSADNVRMQLLRIMEREELEMISTSFEDKKY 651
Query: 174 YINIRKSLVTGFFMQL 189
Y NIR++L GFFMQ+
Sbjct: 652 YENIRRALCAGFFMQV 667
Score = 198 (74.8 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 39/64 (60%), Positives = 49/64 (76%)
Query: 207 QEDP-QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTG 265
QE+P QWC+D+F++ RSL+SADNVR QL RIM+R L+ ST F K YY NIR++L G
Sbjct: 603 QENPKQWCHDHFLSLRSLQSADNVRMQLLRIMEREELEMISTSFEDKKYYENIRRALCAG 662
Query: 266 FFMQ 269
FFMQ
Sbjct: 663 FFMQ 666
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 323 (118.8 bits), Expect = 3.8e-28, P = 3.8e-28
Identities = 58/100 (58%), Positives = 74/100 (74%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP + + AD AK F H DGDHLT+LNVYH+FK+N EDP WCYDNF+N+R++K AD+VR
Sbjct: 529 RPKDNRIEADSAKKSFDHFDGDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRAIKQADSVR 588
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
QL+RI+ RF L S + SK YY NI+K + GFFMQ+
Sbjct: 589 SQLARILTRFKLPLVSGDVNSKFYYENIKKCIAAGFFMQV 628
Score = 200 (75.5 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 36/62 (58%), Positives = 46/62 (74%)
Query: 208 EDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
EDP WCYDNF+N+R++K AD+VR QL+RI+ RF L S + SK YY NI+K + GFF
Sbjct: 566 EDPTWCYDNFLNHRAIKQADSVRSQLARILTRFKLPLVSGDVNSKFYYENIKKCIAAGFF 625
Query: 268 MQ 269
MQ
Sbjct: 626 MQ 627
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 304 (112.1 bits), Expect = 6.1e-28, Sum P(2) = 6.1e-28
Identities = 65/142 (45%), Positives = 88/142 (61%)
Query: 54 LDPIAALCQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHL 113
LDP A+ + P + L T L+ + Q RP +K AD+ K F H++GDHL
Sbjct: 538 LDPALAV-MLVSSPEFYCSNEMLSVTSLLSVPQVFMRPANNRKRADEMKEHFKHMEGDHL 596
Query: 114 TLLNVYHAFKQNQ----EDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFT 169
TLLN YHAFK + +WC+++F++YR L SADNVR QL IM+R +L+ ST FT
Sbjct: 597 TLLNAYHAFKSEMAKGTDMKKWCHEHFLSYRHLSSADNVRAQLKGIMERQDLELVSTPFT 656
Query: 170 SKDYYINIRKSLVTGFFMQLII 191
K+YY NIR+ LV GFFMQ+ +
Sbjct: 657 DKNYYTNIRRCLVAGFFMQVAL 678
Score = 189 (71.6 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 35/59 (59%), Positives = 46/59 (77%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 269
+WC+++F++YR L SADNVR QL IM+R +L+ ST FT K+YY NIR+ LV GFFMQ
Sbjct: 617 KWCHEHFLSYRHLSSADNVRAQLKGIMERQDLELVSTPFTDKNYYTNIRRCLVAGFFMQ 675
Score = 43 (20.2 bits), Expect = 6.1e-28, Sum P(2) = 6.1e-28
Identities = 9/39 (23%), Positives = 19/39 (48%)
Query: 210 PQWCYDNFVNYRSLKSA--DNVRQQLSRIMDRFNLKRSS 246
P+W D NY L + D ++ L ++++ + +S
Sbjct: 731 PEWLIDIAPNYYDLDNFEDDQAKRALKSVVEKMKRREAS 769
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 318 (117.0 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 76/197 (38%), Positives = 114/197 (57%)
Query: 1 MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAP--RVADN--LDP 56
+ L + I+ L+ D + D + E+ M L N + L P R+A LDP
Sbjct: 467 LELKKLGIDDLVHFDFM--DPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDP 524
Query: 57 IAALCQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLL 116
+ A+ + + L ++ + RP + KK ADDAK FAH DGDH+TLL
Sbjct: 525 MLAVMLIGSFEFQCSQEI-LTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLL 583
Query: 117 NVYHAFKQNQEDP----QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKD 172
NVYHAFK ++ +WC D+++NYRSL +ADN+R QL R+M+R+NL+ ++T++ S
Sbjct: 584 NVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPK 643
Query: 173 YYINIRKSLVTGFFMQL 189
Y+ NIRK+L +GFFMQ+
Sbjct: 644 YFDNIRKALASGFFMQV 660
Score = 194 (73.4 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 32/59 (54%), Positives = 49/59 (83%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 269
+WC D+++NYRSL +ADN+R QL R+M+R+NL+ ++T++ S Y+ NIRK+L +GFFMQ
Sbjct: 601 KWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQ 659
>UNIPROTKB|F1NHJ1 [details] [associations]
symbol:SEPSECS "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016785 "transferase activity, transferring
selenium-containing groups" evidence=IEA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0097056
"selenocysteinyl-tRNA(Sec) biosynthetic process" evidence=IEA]
[GO:0000049 "tRNA binding" evidence=IEA] [GO:0001514
"selenocysteine incorporation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR008829 InterPro:IPR015421 InterPro:IPR019872
Pfam:PF05889 PIRSF:PIRSF017689 GO:GO:0005634 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0000049 GO:GO:0001514 GeneTree:ENSGT00390000007332
OMA:IPHVVNN GO:GO:0016785 PANTHER:PTHR12944 TIGRFAMs:TIGR03531
EMBL:AADN02015437 IPI:IPI00581423 Ensembl:ENSGALT00000023246
Uniprot:F1NHJ1
Length = 489
Score = 288 (106.4 bits), Expect = 6.6e-25, P = 6.6e-25
Identities = 49/86 (56%), Positives = 72/86 (83%)
Query: 5 PIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALCQRY 64
P+VIE ++ GDELRTD+ ++E+++ TLG++NI+CV +TTSCFAPRV D L+ +A +C Y
Sbjct: 186 PVVIENVLEGDELRTDIEAVEAKIKTLGAENILCVHSTTSCFAPRVPDRLEELAIICANY 245
Query: 65 NIPHVINNAYGLQSTRLMKLIQEAAR 90
+IPH++NNAYG+QS++ M LIQ+ AR
Sbjct: 246 DIPHIVNNAYGVQSSKCMHLIQQGAR 271
>UNIPROTKB|E1BPY3 [details] [associations]
symbol:SEPSECS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001514 "selenocysteine incorporation"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA] [GO:0097056
"selenocysteinyl-tRNA(Sec) biosynthetic process" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0016785
"transferase activity, transferring selenium-containing groups"
evidence=IEA] InterPro:IPR008829 InterPro:IPR015421
InterPro:IPR019872 Pfam:PF05889 PIRSF:PIRSF017689
INTERPRO:IPR019793 GO:GO:0005634 GO:GO:0005737 GO:GO:0030170
Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0000049
PROSITE:PS00435 GO:GO:0001514 GeneTree:ENSGT00390000007332
KO:K03341 OMA:IPHVVNN GO:GO:0016785 PANTHER:PTHR12944
TIGRFAMs:TIGR03531 CTD:51091 EMBL:DAAA02017160 EMBL:DAAA02017161
IPI:IPI00697966 RefSeq:XP_002688221.2 RefSeq:XP_597076.6
Ensembl:ENSBTAT00000019464 GeneID:518874 KEGG:bta:518874
Uniprot:E1BPY3
Length = 504
Score = 281 (104.0 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 48/86 (55%), Positives = 69/86 (80%)
Query: 5 PIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALCQRY 64
P+VIE ++ GDELRTDL ++E+++ LG D+++CV +TTSCFAPRV D L+ +A +C Y
Sbjct: 186 PVVIENILEGDELRTDLKAVEAKVQELGPDHVLCVHSTTSCFAPRVPDRLEELAVICANY 245
Query: 65 NIPHVINNAYGLQSTRLMKLIQEAAR 90
IPH++NNAYG+QS++ M LIQ+ AR
Sbjct: 246 GIPHIVNNAYGVQSSKCMHLIQQGAR 271
>UNIPROTKB|I3LC71 [details] [associations]
symbol:LOC100623300 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0097056 "selenocysteinyl-tRNA(Sec) biosynthetic
process" evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0016785 "transferase activity, transferring
selenium-containing groups" evidence=IEA] InterPro:IPR008829
InterPro:IPR015421 InterPro:IPR019872 Pfam:PF05889
PIRSF:PIRSF017689 GO:GO:0030170 Gene3D:3.40.640.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008152
GeneTree:ENSGT00390000007332 GO:GO:0016785 PANTHER:PTHR12944
TIGRFAMs:TIGR03531 Ensembl:ENSSSCT00000026913 OMA:HKSPIKA
Uniprot:I3LC71
Length = 501
Score = 278 (102.9 bits), Expect = 9.5e-24, P = 9.5e-24
Identities = 48/86 (55%), Positives = 68/86 (79%)
Query: 5 PIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALCQRY 64
P+VIE ++ GDELRTDL ++E+++ LG D ++CV +TTSCFAPRV D L+ +A +C Y
Sbjct: 183 PVVIENILEGDELRTDLKAVEAKVQELGPDYVLCVHSTTSCFAPRVPDRLEELAVICANY 242
Query: 65 NIPHVINNAYGLQSTRLMKLIQEAAR 90
IPH++NNAYG+QS++ M LIQ+ AR
Sbjct: 243 GIPHIVNNAYGVQSSKCMHLIQQGAR 268
>UNIPROTKB|I3L9M2 [details] [associations]
symbol:LOC100623300 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0097056 "selenocysteinyl-tRNA(Sec) biosynthetic
process" evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0016785 "transferase activity, transferring
selenium-containing groups" evidence=IEA] InterPro:IPR008829
InterPro:IPR015421 InterPro:IPR019872 Pfam:PF05889
PIRSF:PIRSF017689 INTERPRO:IPR019793 GO:GO:0030170
Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008152
PROSITE:PS00435 GeneTree:ENSGT00390000007332 KO:K03341 OMA:IPHVVNN
GO:GO:0016785 PANTHER:PTHR12944 TIGRFAMs:TIGR03531 EMBL:CU467902
RefSeq:XP_003356924.1 Ensembl:ENSSSCT00000032520 GeneID:100622027
KEGG:ssc:100622027 Uniprot:I3L9M2
Length = 504
Score = 278 (102.9 bits), Expect = 9.8e-24, P = 9.8e-24
Identities = 48/86 (55%), Positives = 68/86 (79%)
Query: 5 PIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALCQRY 64
P+VIE ++ GDELRTDL ++E+++ LG D ++CV +TTSCFAPRV D L+ +A +C Y
Sbjct: 186 PVVIENILEGDELRTDLKAVEAKVQELGPDYVLCVHSTTSCFAPRVPDRLEELAVICANY 245
Query: 65 NIPHVINNAYGLQSTRLMKLIQEAAR 90
IPH++NNAYG+QS++ M LIQ+ AR
Sbjct: 246 GIPHIVNNAYGVQSSKCMHLIQQGAR 271
>UNIPROTKB|Q9HD40 [details] [associations]
symbol:SEPSECS "O-phosphoseryl-tRNA(Sec) selenium
transferase" species:9606 "Homo sapiens" [GO:0016785 "transferase
activity, transferring selenium-containing groups" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0097056
"selenocysteinyl-tRNA(Sec) biosynthetic process" evidence=IEA]
[GO:0000049 "tRNA binding" evidence=ISS] [GO:0001514
"selenocysteine incorporation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] UniPathway:UPA00906
InterPro:IPR008829 InterPro:IPR015421 InterPro:IPR019872
Pfam:PF05889 PIRSF:PIRSF017689 INTERPRO:IPR019793 GO:GO:0005634
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424
SUPFAM:SSF53383 DrugBank:DB00114 GO:GO:0000049 EMBL:CH471069
eggNOG:COG0076 GO:GO:0001514 GO:GO:0097056 Orphanet:2524
HOGENOM:HOG000254245 KO:K03341 OMA:IPHVVNN GO:GO:0016785
PANTHER:PTHR12944 TIGRFAMs:TIGR03531 CTD:51091 HOVERGEN:HBG061363
OrthoDB:EOG4JQ3XB EMBL:AK292476 EMBL:BX648976 EMBL:AC007073
EMBL:AC104662 EMBL:BC023539 EMBL:BC117202 EMBL:AF146396
EMBL:AJ277541 EMBL:AJ238617 EMBL:AF282065 IPI:IPI00155389
IPI:IPI00302283 IPI:IPI00930339 RefSeq:NP_058651.3
UniGene:Hs.253305 PDB:3HL2 PDBsum:3HL2 ProteinModelPortal:Q9HD40
SMR:Q9HD40 IntAct:Q9HD40 STRING:Q9HD40 PhosphoSite:Q9HD40
DMDM:62287911 PaxDb:Q9HD40 PRIDE:Q9HD40 DNASU:51091
Ensembl:ENST00000302922 Ensembl:ENST00000382103
Ensembl:ENST00000514585 GeneID:51091 KEGG:hsa:51091 UCSC:uc003grg.3
UCSC:uc003gri.3 GeneCards:GC04M025121 HGNC:HGNC:30605 MIM:613009
MIM:613811 neXtProt:NX_Q9HD40 Orphanet:247198 PharmGKB:PA162402915
InParanoid:Q9HD40 EvolutionaryTrace:Q9HD40 GenomeRNAi:51091
NextBio:53771 ArrayExpress:Q9HD40 Bgee:Q9HD40 CleanEx:HS_SEPSECS
Genevestigator:Q9HD40 GermOnline:ENSG00000109618 Uniprot:Q9HD40
Length = 501
Score = 277 (102.6 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 48/86 (55%), Positives = 69/86 (80%)
Query: 5 PIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALCQRY 64
P+VIE ++ GDELRTDL ++E+++ LG D I+C+ +TTSCFAPRV D L+ +A +C Y
Sbjct: 186 PVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANY 245
Query: 65 NIPHVINNAYGLQSTRLMKLIQEAAR 90
+IPH++NNAYG+QS++ M LIQ+ AR
Sbjct: 246 DIPHIVNNAYGVQSSKCMHLIQQGAR 271
>UNIPROTKB|E2R3S6 [details] [associations]
symbol:SEPSECS "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0097056 "selenocysteinyl-tRNA(Sec)
biosynthetic process" evidence=IEA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0016785 "transferase activity,
transferring selenium-containing groups" evidence=IEA]
InterPro:IPR008829 InterPro:IPR015421 InterPro:IPR019872
Pfam:PF05889 PIRSF:PIRSF017689 GO:GO:0030170 Gene3D:3.40.640.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008152
GeneTree:ENSGT00390000007332 OMA:IPHVVNN GO:GO:0016785
PANTHER:PTHR12944 TIGRFAMs:TIGR03531 EMBL:AAEX03002587
EMBL:AAEX03002588 Ensembl:ENSCAFT00000026100 Uniprot:E2R3S6
Length = 504
Score = 277 (102.6 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 49/86 (56%), Positives = 68/86 (79%)
Query: 5 PIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALCQRY 64
P+VIE ++ GDELRTDL ++E+++ LG DNI+CV +TTSCFAPRV D L+ +A +C
Sbjct: 186 PVVIENVLEGDELRTDLKAVEAKVQELGPDNILCVHSTTSCFAPRVPDRLEELAVICANS 245
Query: 65 NIPHVINNAYGLQSTRLMKLIQEAAR 90
IPH++NNAYG+QS++ M LIQ+ AR
Sbjct: 246 GIPHIVNNAYGVQSSKCMHLIQQGAR 271
>UNIPROTKB|J9NRL3 [details] [associations]
symbol:SEPSECS "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0097056 "selenocysteinyl-tRNA(Sec)
biosynthetic process" evidence=IEA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0016785 "transferase activity,
transferring selenium-containing groups" evidence=IEA]
InterPro:IPR008829 InterPro:IPR015421 InterPro:IPR019872
Pfam:PF05889 PIRSF:PIRSF017689 GO:GO:0030170 Gene3D:3.40.640.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008152
GeneTree:ENSGT00390000007332 GO:GO:0016785 PANTHER:PTHR12944
TIGRFAMs:TIGR03531 EMBL:AAEX03002587 EMBL:AAEX03002588
Ensembl:ENSCAFT00000044428 Uniprot:J9NRL3
Length = 504
Score = 277 (102.6 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 49/86 (56%), Positives = 68/86 (79%)
Query: 5 PIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALCQRY 64
P+VIE ++ GDELRTDL ++E+++ LG DNI+CV +TTSCFAPRV D L+ +A +C
Sbjct: 186 PVVIENVLEGDELRTDLKAVEAKVQELGPDNILCVHSTTSCFAPRVPDRLEELAVICANS 245
Query: 65 NIPHVINNAYGLQSTRLMKLIQEAAR 90
IPH++NNAYG+QS++ M LIQ+ AR
Sbjct: 246 GIPHIVNNAYGVQSSKCMHLIQQGAR 271
>MGI|MGI:1098791 [details] [associations]
symbol:Sepsecs "Sep (O-phosphoserine) tRNA:Sec
(selenocysteine) tRNA synthase" species:10090 "Mus musculus"
[GO:0000049 "tRNA binding" evidence=IDA] [GO:0001514
"selenocysteine incorporation" evidence=IDA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006412 "translation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016785 "transferase
activity, transferring selenium-containing groups" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0097056
"selenocysteinyl-tRNA(Sec) biosynthetic process" evidence=IEA]
UniPathway:UPA00906 InterPro:IPR008829 InterPro:IPR015421
InterPro:IPR019872 Pfam:PF05889 PIRSF:PIRSF017689 MGI:MGI:1098791
GO:GO:0005634 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0000049 eggNOG:COG0076
GO:GO:0001514 GO:GO:0097056 GeneTree:ENSGT00390000007332
HOGENOM:HOG000254245 KO:K03341 OMA:IPHVVNN GO:GO:0016785
PANTHER:PTHR12944 TIGRFAMs:TIGR03531 CTD:51091 HOVERGEN:HBG061363
OrthoDB:EOG4JQ3XB EMBL:AK033654 EMBL:BC062133 IPI:IPI00227678
RefSeq:NP_766078.1 UniGene:Mm.244719 PDB:3BC8 PDB:3BCA PDB:3BCB
PDBsum:3BC8 PDBsum:3BCA PDBsum:3BCB ProteinModelPortal:Q6P6M7
SMR:Q6P6M7 STRING:Q6P6M7 PhosphoSite:Q6P6M7 PaxDb:Q6P6M7
PRIDE:Q6P6M7 Ensembl:ENSMUST00000031069 GeneID:211006
KEGG:mmu:211006 UCSC:uc008xko.1 InParanoid:Q6P6M7
BioCyc:MetaCyc:MONOMER-14964 EvolutionaryTrace:Q6P6M7
NextBio:373121 Bgee:Q6P6M7 Genevestigator:Q6P6M7
GermOnline:ENSMUSG00000029173 Uniprot:Q6P6M7
Length = 504
Score = 276 (102.2 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 48/86 (55%), Positives = 70/86 (81%)
Query: 5 PIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALCQRY 64
P+VIE ++ GDELRTDL ++E+++ LG ++I+C+ +TT+CFAPRV D L+ +A +C Y
Sbjct: 186 PVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANY 245
Query: 65 NIPHVINNAYGLQSTRLMKLIQEAAR 90
+IPHV+NNAYGLQS++ M LIQ+ AR
Sbjct: 246 DIPHVVNNAYGLQSSKCMHLIQQGAR 271
>ZFIN|ZDB-GENE-040426-859 [details] [associations]
symbol:sepsecs "Sep (O-phosphoserine) tRNA:Sec
(selenocysteine) tRNA synthase" species:7955 "Danio rerio"
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0016785 "transferase activity,
transferring selenium-containing groups" evidence=IEA] [GO:0097056
"selenocysteinyl-tRNA(Sec) biosynthetic process" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] UniPathway:UPA00906 InterPro:IPR008829
InterPro:IPR015421 InterPro:IPR019872 Pfam:PF05889
PIRSF:PIRSF017689 ZFIN:ZDB-GENE-040426-859 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006412 eggNOG:COG0076 GO:GO:0097056 HOGENOM:HOG000254245
KO:K03341 GO:GO:0016785 PANTHER:PTHR12944 TIGRFAMs:TIGR03531
EMBL:BC044561 IPI:IPI00497044 RefSeq:NP_956448.1 UniGene:Dr.82434
ProteinModelPortal:Q803A7 SMR:Q803A7 STRING:Q803A7 GeneID:393123
KEGG:dre:393123 CTD:51091 HOVERGEN:HBG061363 InParanoid:Q803A7
OrthoDB:EOG4JQ3XB NextBio:20814195 ArrayExpress:Q803A7
Uniprot:Q803A7
Length = 490
Score = 259 (96.2 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 44/86 (51%), Positives = 67/86 (77%)
Query: 5 PIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALCQRY 64
P+VIE ++ GDELRT+L +E ++ G++N +CV +TTSCFAPRV D L+ ++ LC ++
Sbjct: 186 PVVIENVLEGDELRTNLEEVERKIEEFGAENTLCVHSTTSCFAPRVPDRLEELSVLCAKH 245
Query: 65 NIPHVINNAYGLQSTRLMKLIQEAAR 90
+IPH++NNAYG+Q ++ M LIQ+ AR
Sbjct: 246 DIPHIVNNAYGVQPSKCMHLIQQGAR 271
>DICTYBASE|DDB_G0280197 [details] [associations]
symbol:sepsecs "O-phosphoseryl-tRNA(Sec) selenium
transferase" species:44689 "Dictyostelium discoideum" [GO:0097056
"selenocysteinyl-tRNA(Sec) biosynthetic process" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0016785
"transferase activity, transferring selenium-containing groups"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] UniPathway:UPA00906 InterPro:IPR008829
InterPro:IPR015421 InterPro:IPR019872 Pfam:PF05889
PIRSF:PIRSF017689 dictyBase:DDB_G0280197 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GenomeReviews:CM000152_GR GO:GO:0006412 EMBL:AAFI02000035
eggNOG:COG0076 GO:GO:0097056 KO:K03341 OMA:IPHVVNN GO:GO:0016785
PANTHER:PTHR12944 TIGRFAMs:TIGR03531 RefSeq:XP_641299.1
ProteinModelPortal:Q54VQ6 STRING:Q54VQ6 EnsemblProtists:DDB0266531
GeneID:8622432 KEGG:ddi:DDB_G0280197 ProtClustDB:CLSZ2439547
Uniprot:Q54VQ6
Length = 479
Score = 257 (95.5 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 47/88 (53%), Positives = 66/88 (75%)
Query: 3 LHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALCQ 62
L PIVI + GD +RTDLV++E ++ LG DNI+CV +TTSCFAPRV D + I+ +C+
Sbjct: 187 LIPIVIPNQLDGDMIRTDLVAIEDKIKELGVDNILCVFSTTSCFAPRVPDKIIEISEICK 246
Query: 63 RYNIPHVINNAYGLQSTRLMKLIQEAAR 90
RYNI H+INNAYGLQ ++++ I +A +
Sbjct: 247 RYNIGHIINNAYGLQCSKILHNISQACK 274
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 261 (96.9 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 52/106 (49%), Positives = 73/106 (68%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDP----QWCYDNFVNYRSLKSA 145
RP A+K AD+AK+ FA DGDHLTL+NVY AF + +WC DNF++YRSL SA
Sbjct: 560 RPASARKRADEAKLSFAQADGDHLTLINVYEAFISPEASEIGTHKWCRDNFLSYRSLTSA 619
Query: 146 DNVRQQLSRIMDRFNLKRSS--TEFTSKDYYINIRKSLVTGFFMQL 189
NVR QL R+M +++L+ S + + +Y+ N++K+LV GFFMQ+
Sbjct: 620 KNVRNQLQRLMQKYDLQLISQYNQVSEFEYWENVKKALVAGFFMQV 665
Score = 161 (61.7 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 30/61 (49%), Positives = 45/61 (73%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSS--TEFTSKDYYINIRKSLVTGFFM 268
+WC DNF++YRSL SA NVR QL R+M +++L+ S + + +Y+ N++K+LV GFFM
Sbjct: 604 KWCRDNFLSYRSLTSAKNVRNQLQRLMQKYDLQLISQYNQVSEFEYWENVKKALVAGFFM 663
Query: 269 Q 269
Q
Sbjct: 664 Q 664
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 217 (81.4 bits), Expect = 9.8e-17, P = 9.8e-17
Identities = 47/108 (43%), Positives = 66/108 (61%)
Query: 82 MKLIQEA-ARPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYR 140
M IQ+ P + AD + +FA +GDH+T+LNV+ F +N +WC D+FVNYR
Sbjct: 533 MMQIQDVFITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYR 592
Query: 141 SLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
L ADNVR QL R++ RF +++ S+ + NIR+ LVTGFF Q
Sbjct: 593 GLMRADNVRSQLVRLLKRFEIEKVSSRGLI-NCSENIRQCLVTGFFSQ 639
Score = 144 (55.7 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 30/59 (50%), Positives = 40/59 (67%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 269
+WC D+FVNYR L ADNVR QL R++ RF +++ S+ + NIR+ LVTGFF Q
Sbjct: 582 KWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLI-NCSENIRQCLVTGFFSQ 639
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 209 (78.6 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 49/133 (36%), Positives = 73/133 (54%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP E + AD K +F +GDHLTLLNVY ++K ++ WC++NFV RSL+ A +VR
Sbjct: 963 RPKEKQALADQKKAKFFQPEGDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVR 1022
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL----------IIVLAYPISS 199
+QL IMDR+ L S ++Y I+K++ +GFF +V P+
Sbjct: 1023 KQLITIMDRYKLDIISA---GRNY-TKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYI 1078
Query: 200 LPTVSLDQEDPQW 212
P+ +L +P W
Sbjct: 1079 HPSSTLFNRNPDW 1091
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 199 (75.1 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 57/188 (30%), Positives = 95/188 (50%)
Query: 1 MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSC-FAPRVADN-LDPIA 58
+ +H ++ + T L++LE Q+ LG+ N + LTT+ A D L +
Sbjct: 289 LGIHDLMHFDFLDPPPYETLLLALE-QLYALGALNHLGELTTSGRKMAELPVDPMLSKMI 347
Query: 59 ALCQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNV 118
++Y+ I + S RP + AD+A++ F GDHL LLNV
Sbjct: 348 LASEKYSCSEEILTVAAMLSVNNSIFY----RPKDKVVHADNARVNFFLPGGDHLVLLNV 403
Query: 119 YHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIR 178
Y + ++ QWCY+NFV +RS++ A +VR+QL +++R + SS + DY I +R
Sbjct: 404 YTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ---GDY-IRVR 459
Query: 179 KSLVTGFF 186
K++ G+F
Sbjct: 460 KAITAGYF 467
Score = 126 (49.4 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 24/57 (42%), Positives = 39/57 (68%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
QWCY+NFV +RS++ A +VR+QL +++R + SS + DY I +RK++ G+F
Sbjct: 415 QWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ---GDY-IRVRKAITAGYF 467
Score = 43 (20.2 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 269 QDYYINIRKSLVTGFF 284
Q YI +RK++ G+F
Sbjct: 452 QGDYIRVRKAITAGYF 467
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 199 (75.1 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 57/188 (30%), Positives = 95/188 (50%)
Query: 1 MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSC-FAPRVADN-LDPIA 58
+ +H ++ + T L++LE Q+ LG+ N + LTT+ A D L +
Sbjct: 289 LGIHDLMHFDFLDPPPYETLLLALE-QLYALGALNHLGELTTSGRKMAELPVDPMLSKMI 347
Query: 59 ALCQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNV 118
++Y+ I + S RP + AD+A++ F GDHL LLNV
Sbjct: 348 LASEKYSCSEEILTVAAMLSVNNSIFY----RPKDKVVHADNARVNFFLPGGDHLVLLNV 403
Query: 119 YHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIR 178
Y + ++ QWCY+NFV +RS++ A +VR+QL +++R + SS + DY I +R
Sbjct: 404 YTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ---GDY-IRVR 459
Query: 179 KSLVTGFF 186
K++ G+F
Sbjct: 460 KAITAGYF 467
Score = 126 (49.4 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 24/57 (42%), Positives = 39/57 (68%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
QWCY+NFV +RS++ A +VR+QL +++R + SS + DY I +RK++ G+F
Sbjct: 415 QWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ---GDY-IRVRKAITAGYF 467
Score = 43 (20.2 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 269 QDYYINIRKSLVTGFF 284
Q YI +RK++ G+F
Sbjct: 452 QGDYIRVRKAITAGYF 467
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 207 (77.9 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 56/188 (29%), Positives = 102/188 (54%)
Query: 1 MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVAD-NLDPIAA 59
M ++ ++ M + T + ++E Q+ TLG+ + +LT R+A+ L+P+
Sbjct: 935 MGINDLLSFDFMDAPPMETLITAME-QLYTLGALDDEGLLTR---LGRRMAEFPLEPM-- 988
Query: 60 LCQRYNIP-HVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNV 118
LC+ + H+ + L ++ + RP + + AD K +F +GDHLTLL V
Sbjct: 989 LCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAV 1048
Query: 119 YHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIR 178
Y+++K N+ WCY+NF+ RSL+ A ++R+Q+ IMDR L S ++ + ++
Sbjct: 1049 YNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQ 1104
Query: 179 KSLVTGFF 186
K++ +GFF
Sbjct: 1105 KAICSGFF 1112
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 207 (77.9 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 56/188 (29%), Positives = 102/188 (54%)
Query: 1 MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVAD-NLDPIAA 59
M ++ ++ M + T + ++E Q+ TLG+ + +LT R+A+ L+P+
Sbjct: 904 MGINDLLSFDFMDAPPMETLITAME-QLYTLGALDDEGLLTR---LGRRMAEFPLEPM-- 957
Query: 60 LCQRYNIP-HVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNV 118
LC+ + H+ + L ++ + RP + + AD K +F +GDHLTLL V
Sbjct: 958 LCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAV 1017
Query: 119 YHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIR 178
Y+++K N+ WCY+NF+ RSL+ A ++R+Q+ IMDR L S ++ + ++
Sbjct: 1018 YNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQ 1073
Query: 179 KSLVTGFF 186
K++ +GFF
Sbjct: 1074 KAICSGFF 1081
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 207 (77.9 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 56/188 (29%), Positives = 102/188 (54%)
Query: 1 MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVAD-NLDPIAA 59
M ++ ++ M + T + ++E Q+ TLG+ + +LT R+A+ L+P+
Sbjct: 927 MGINDLLSFDFMDAPPMETLITAME-QLYTLGALDDEGLLTR---LGRRMAEFPLEPM-- 980
Query: 60 LCQRYNIP-HVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNV 118
LC+ + H+ + L ++ + RP + + AD K +F +GDHLTLL V
Sbjct: 981 LCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAV 1040
Query: 119 YHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIR 178
Y+++K N+ WCY+NF+ RSL+ A ++R+Q+ IMDR L S ++ + ++
Sbjct: 1041 YNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQ 1096
Query: 179 KSLVTGFF 186
K++ +GFF
Sbjct: 1097 KAICSGFF 1104
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 207 (77.9 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 56/188 (29%), Positives = 102/188 (54%)
Query: 1 MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVAD-NLDPIAA 59
M ++ ++ M + T + ++E Q+ TLG+ + +LT R+A+ L+P+
Sbjct: 931 MGINDLLSFDFMDAPPMETLITAME-QLYTLGALDDEGLLTR---LGRRMAEFPLEPM-- 984
Query: 60 LCQRYNIP-HVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNV 118
LC+ + H+ + L ++ + RP + + AD K +F +GDHLTLL V
Sbjct: 985 LCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAV 1044
Query: 119 YHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIR 178
Y+++K N+ WCY+NF+ RSL+ A ++R+Q+ IMDR L S ++ + ++
Sbjct: 1045 YNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQ 1100
Query: 179 KSLVTGFF 186
K++ +GFF
Sbjct: 1101 KAICSGFF 1108
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 207 (77.9 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 56/188 (29%), Positives = 102/188 (54%)
Query: 1 MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVAD-NLDPIAA 59
M ++ ++ M + T + ++E Q+ TLG+ + +LT R+A+ L+P+
Sbjct: 935 MGINDLLSFDFMDAPPMETLITAME-QLYTLGALDDEGLLTR---LGRRMAEFPLEPM-- 988
Query: 60 LCQRYNIP-HVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNV 118
LC+ + H+ + L ++ + RP + + AD K +F +GDHLTLL V
Sbjct: 989 LCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAV 1048
Query: 119 YHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIR 178
Y+++K N+ WCY+NF+ RSL+ A ++R+Q+ IMDR L S ++ + ++
Sbjct: 1049 YNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQ 1104
Query: 179 KSLVTGFF 186
K++ +GFF
Sbjct: 1105 KAICSGFF 1112
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 207 (77.9 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 56/188 (29%), Positives = 102/188 (54%)
Query: 1 MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVAD-NLDPIAA 59
M ++ ++ M + T + ++E Q+ TLG+ + +LT R+A+ L+P+
Sbjct: 945 MGINDLLSFDFMDAPPMETLITAME-QLYTLGALDDEGLLTR---LGRRMAEFPLEPM-- 998
Query: 60 LCQRYNIP-HVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNV 118
LC+ + H+ + L ++ + RP + + AD K +F +GDHLTLL V
Sbjct: 999 LCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAV 1058
Query: 119 YHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIR 178
Y+++K N+ WCY+NF+ RSL+ A ++R+Q+ IMDR L S ++ + ++
Sbjct: 1059 YNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQ 1114
Query: 179 KSLVTGFF 186
K++ +GFF
Sbjct: 1115 KAICSGFF 1122
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 207 (77.9 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 56/188 (29%), Positives = 102/188 (54%)
Query: 1 MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVAD-NLDPIAA 59
M ++ ++ M + T + ++E Q+ TLG+ + +LT R+A+ L+P+
Sbjct: 957 MGINDLLSFDFMDAPPMETLITAME-QLYTLGALDDEGLLTR---LGRRMAEFPLEPM-- 1010
Query: 60 LCQRYNIP-HVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNV 118
LC+ + H+ + L ++ + RP + + AD K +F +GDHLTLL V
Sbjct: 1011 LCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAV 1070
Query: 119 YHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIR 178
Y+++K N+ WCY+NF+ RSL+ A ++R+Q+ IMDR L S ++ + ++
Sbjct: 1071 YNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQ 1126
Query: 179 KSLVTGFF 186
K++ +GFF
Sbjct: 1127 KAICSGFF 1134
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 207 (77.9 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 56/188 (29%), Positives = 102/188 (54%)
Query: 1 MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVAD-NLDPIAA 59
M ++ ++ M + T + ++E Q+ TLG+ + +LT R+A+ L+P+
Sbjct: 959 MGINDLLSFDFMDAPPMETLITAME-QLYTLGALDDEGLLTR---LGRRMAEFPLEPM-- 1012
Query: 60 LCQRYNIP-HVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNV 118
LC+ + H+ + L ++ + RP + + AD K +F +GDHLTLL V
Sbjct: 1013 LCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAV 1072
Query: 119 YHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIR 178
Y+++K N+ WCY+NF+ RSL+ A ++R+Q+ IMDR L S ++ + ++
Sbjct: 1073 YNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKST----VRVQ 1128
Query: 179 KSLVTGFF 186
K++ +GFF
Sbjct: 1129 KAICSGFF 1136
>WB|WBGene00008379 [details] [associations]
symbol:secs-1 species:6239 "Caenorhabditis elegans"
[GO:0006520 "cellular amino acid metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016785 "transferase activity,
transferring selenium-containing groups" evidence=IEA]
UniPathway:UPA00906 InterPro:IPR008829 InterPro:IPR015421
InterPro:IPR019872 Pfam:PF05889 PIRSF:PIRSF017689 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006412 eggNOG:COG0076 EMBL:Z74030 GO:GO:0097056 PIR:T20309
RefSeq:NP_001129887.1 RefSeq:NP_505761.1 UniGene:Cel.4312
ProteinModelPortal:Q18953 SMR:Q18953 DIP:DIP-26886N IntAct:Q18953
MINT:MINT-1042069 STRING:Q18953 PaxDb:Q18953
EnsemblMetazoa:D1054.13a.1 EnsemblMetazoa:D1054.13a.2 GeneID:179498
KEGG:cel:CELE_D1054.13 CTD:179498 WormBase:D1054.13a
WormBase:D1054.13b GeneTree:ENSGT00390000007332
HOGENOM:HOG000254245 KO:K03341 OMA:IPHVVNN NextBio:905662
GO:GO:0016785 PANTHER:PTHR12944 TIGRFAMs:TIGR03531 Uniprot:Q18953
Length = 481
Score = 202 (76.2 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 37/84 (44%), Positives = 58/84 (69%)
Query: 5 PIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALCQRY 64
PI++E + D L TD+ ++ + G + I+CV+TTTSCFAPR DN++ I+A+C +
Sbjct: 180 PIIVEPIRDRDSLITDVETVNRIIEQRGEE-ILCVMTTTSCFAPRSPDNVEAISAICAAH 238
Query: 65 NIPHVINNAYGLQSTRLMKLIQEA 88
++PH++NNAYGLQS ++ I A
Sbjct: 239 DVPHLVNNAYGLQSEETIRKIAAA 262
>UNIPROTKB|Q18953 [details] [associations]
symbol:secs-1 "O-phosphoseryl-tRNA(Sec) selenium
transferase" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] UniPathway:UPA00906 InterPro:IPR008829
InterPro:IPR015421 InterPro:IPR019872 Pfam:PF05889
PIRSF:PIRSF017689 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006412 eggNOG:COG0076
EMBL:Z74030 GO:GO:0097056 PIR:T20309 RefSeq:NP_001129887.1
RefSeq:NP_505761.1 UniGene:Cel.4312 ProteinModelPortal:Q18953
SMR:Q18953 DIP:DIP-26886N IntAct:Q18953 MINT:MINT-1042069
STRING:Q18953 PaxDb:Q18953 EnsemblMetazoa:D1054.13a.1
EnsemblMetazoa:D1054.13a.2 GeneID:179498 KEGG:cel:CELE_D1054.13
CTD:179498 WormBase:D1054.13a WormBase:D1054.13b
GeneTree:ENSGT00390000007332 HOGENOM:HOG000254245 KO:K03341
OMA:IPHVVNN NextBio:905662 GO:GO:0016785 PANTHER:PTHR12944
TIGRFAMs:TIGR03531 Uniprot:Q18953
Length = 481
Score = 202 (76.2 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 37/84 (44%), Positives = 58/84 (69%)
Query: 5 PIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALCQRY 64
PI++E + D L TD+ ++ + G + I+CV+TTTSCFAPR DN++ I+A+C +
Sbjct: 180 PIIVEPIRDRDSLITDVETVNRIIEQRGEE-ILCVMTTTSCFAPRSPDNVEAISAICAAH 238
Query: 65 NIPHVINNAYGLQSTRLMKLIQEA 88
++PH++NNAYGLQS ++ I A
Sbjct: 239 DVPHLVNNAYGLQSEETIRKIAAA 262
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 206 (77.6 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 56/188 (29%), Positives = 101/188 (53%)
Query: 1 MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVAD-NLDPIAA 59
M ++ ++ M + T + ++E Q+ TLG+ + +LT R+A+ L+P+
Sbjct: 883 MGINDLLSFDFMDAPPMETLITAME-QLYTLGALDDEGLLTR---LGRRMAEFPLEPM-- 936
Query: 60 LCQRYNIP-HVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNV 118
LC+ + H+ + L ++ + RP + + AD K +F +GDHLTLL V
Sbjct: 937 LCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAV 996
Query: 119 YHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIR 178
Y+++K N+ WCY+NF+ RSL+ A ++R+Q+ IMDR L S + + ++
Sbjct: 997 YNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKAT----VRVQ 1052
Query: 179 KSLVTGFF 186
K++ +GFF
Sbjct: 1053 KAICSGFF 1060
>FB|FBgn0037347 [details] [associations]
symbol:CG1427 species:7227 "Drosophila melanogaster"
[GO:0016785 "transferase activity, transferring selenium-containing
groups" evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0097056 "selenocysteinyl-tRNA(Sec) biosynthetic
process" evidence=IEA] InterPro:IPR008829 InterPro:IPR015421
InterPro:IPR019872 Pfam:PF05889 PIRSF:PIRSF017689 EMBL:AE014297
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0008152 GeneTree:ENSGT00390000007332 KO:K03341 OMA:IPHVVNN
GO:GO:0016785 PANTHER:PTHR12944 TIGRFAMs:TIGR03531 EMBL:BT050500
RefSeq:NP_649556.3 UniGene:Dm.11794 SMR:Q9VNE3 IntAct:Q9VNE3
MINT:MINT-919803 STRING:Q9VNE3 EnsemblMetazoa:FBtr0273377
GeneID:40681 KEGG:dme:Dmel_CG1427 UCSC:CG1427-RC
FlyBase:FBgn0037347 InParanoid:Q9VNE3 OrthoDB:EOG4M37QS
GenomeRNAi:40681 NextBio:820027 Uniprot:Q9VNE3
Length = 478
Score = 200 (75.5 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 36/88 (40%), Positives = 62/88 (70%)
Query: 3 LHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVADNLDPIAALCQ 62
L P+VI L+ G+ L T++ ++ +LG D+I+C+ TTTSCFAPR +D++ ++ L +
Sbjct: 184 LVPVVIPCLIKGESLNTNVDLFREKIKSLGVDSILCLYTTTSCFAPRNSDDIAEVSKLSK 243
Query: 63 RYNIPHVINNAYGLQSTRLMKLIQEAAR 90
++ IPH++NNAYGLQ+ ++ ++ A R
Sbjct: 244 QWQIPHLVNNAYGLQAKEIVNQLECANR 271
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 204 (76.9 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 56/188 (29%), Positives = 101/188 (53%)
Query: 1 MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVAD-NLDPIAA 59
M ++ ++ M + T + ++E Q+ TLG+ + +LT R+A+ L+P+
Sbjct: 925 MGINDLLSFDFMDAPPMETLITAME-QLYTLGALDDEGLLTR---LGRRMAEFPLEPM-- 978
Query: 60 LCQRYNIP-HVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNV 118
LC+ + H+ + L ++ + RP + + AD K +F +GDHLTLL V
Sbjct: 979 LCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQPEGDHLTLLAV 1038
Query: 119 YHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIR 178
Y+++K N+ WCY+NF+ RSL+ A ++R+Q+ IMDR L S + + ++
Sbjct: 1039 YNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKAT----VRVQ 1094
Query: 179 KSLVTGFF 186
K++ +GFF
Sbjct: 1095 KAICSGFF 1102
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 199 (75.1 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 57/188 (30%), Positives = 95/188 (50%)
Query: 1 MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSC-FAPRVADN-LDPIA 58
+ +H ++ + T L++LE Q+ LG+ N + LTT+ A D L +
Sbjct: 770 LGIHDLMHFDFLDPPPYETLLLALE-QLYALGALNHLGELTTSGRKMAELPVDPMLSKMI 828
Query: 59 ALCQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNV 118
++Y+ I + S RP + AD+A++ F GDHL LLNV
Sbjct: 829 LASEKYSCSEEILTVAAMLSVNNSIFY----RPKDKVVHADNARVNFFLPGGDHLVLLNV 884
Query: 119 YHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIR 178
Y + ++ QWCY+NFV +RS++ A +VR+QL +++R + SS + DY I +R
Sbjct: 885 YTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ---GDY-IRVR 940
Query: 179 KSLVTGFF 186
K++ G+F
Sbjct: 941 KAITAGYF 948
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 24/57 (42%), Positives = 39/57 (68%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
QWCY+NFV +RS++ A +VR+QL +++R + SS + DY I +RK++ G+F
Sbjct: 896 QWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ---GDY-IRVRKAITAGYF 948
Score = 43 (20.2 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 269 QDYYINIRKSLVTGFF 284
Q YI +RK++ G+F
Sbjct: 933 QGDYIRVRKAITAGYF 948
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 200 (75.5 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 41/106 (38%), Positives = 67/106 (63%)
Query: 81 LMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYR 140
+M++ P+ +K+A +FA +GDHLT+LNVY AF ++Q+ QWC D+F+NY+
Sbjct: 504 MMQIQNIFVAPHNQRKSAAREHRKFAVAEGDHLTMLNVYEAFIKHQKSSQWCQDHFLNYK 563
Query: 141 SLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
L A VR+QL ++++F + R+S+E D I + +V+GFF
Sbjct: 564 GLLRATAVREQLRHLLNKFKVPRTSSE-GDPDV---ILRCIVSGFF 605
Score = 116 (45.9 bits), Expect = 0.00082, P = 0.00082
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 207 QEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGF 266
Q+ QWC D+F+NY+ L A VR+QL ++++F + R+S+E D I + +V+GF
Sbjct: 549 QKSSQWCQDHFLNYKGLLRATAVREQLRHLLNKFKVPRTSSE-GDPDV---ILRCIVSGF 604
Query: 267 F 267
F
Sbjct: 605 F 605
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 201 (75.8 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 42/97 (43%), Positives = 60/97 (61%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP + + AD K +F +GDHLTLL VY+++K N+ WCY+NFV R+LK + +VR
Sbjct: 1041 RPKDKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVR 1100
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
+QL IMDR L S S + I+K++ +GFF
Sbjct: 1101 KQLLGIMDRHKLDVVSAGKNS----VRIQKAICSGFF 1133
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 200 (75.5 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 65/223 (29%), Positives = 107/223 (47%)
Query: 1 MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSC-FAPRVADN-LDPIA 58
+ +H ++ + T L++LE Q+ LG+ N + LTT+ A D L +
Sbjct: 771 LGIHDLMHFDFLDPPPYETLLLALE-QLYALGALNHLGELTTSGRKMAELPVDPMLSKMI 829
Query: 59 ALCQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNV 118
++Y+ I + S RP + AD+A++ F GDHL LLNV
Sbjct: 830 LASEKYSCSEEILTVAAMLSVNNSIFY----RPKDKVVHADNARVNFFLPGGDHLVLLNV 885
Query: 119 YHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIR 178
Y + ++ QWCY+NFV +RS++ A +VR+QL +++R + SS + DY I +R
Sbjct: 886 YTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ---GDY-IRVR 941
Query: 179 KSLVTGFFMQLIIVL--AY-PISSLPTV------SLDQEDPQW 212
K++ G+F + Y + TV SL +E P+W
Sbjct: 942 KAITAGYFYHTARLTRSGYRTVKQQQTVFIHPNSSLFEEQPRW 984
Score = 126 (49.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 24/57 (42%), Positives = 39/57 (68%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
QWCY+NFV +RS++ A +VR+QL +++R + SS + DY I +RK++ G+F
Sbjct: 897 QWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ---GDY-IRVRKAITAGYF 949
Score = 42 (19.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 49 RVADNLDPIAALCQRYNIPHVINNAYGLQSTRLMKLIQE-AARPNEAKKAADDAKMRFAH 107
R A + + A RY++P Q +R + L++E + P E ++ ++A++ A
Sbjct: 285 RAAGEQEKLEAT-NRYHMPEETRG----QPSRAVDLVEEESGAPGEEQRRWEEARLGAAS 339
Query: 108 I 108
+
Sbjct: 340 L 340
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 200 (75.5 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 65/223 (29%), Positives = 107/223 (47%)
Query: 1 MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSC-FAPRVADN-LDPIA 58
+ +H ++ + T L++LE Q+ LG+ N + LTT+ A D L +
Sbjct: 774 LGIHDLMHFDFLDPPPYETLLLALE-QLYALGALNHLGELTTSGRKMAELPVDPMLSKMI 832
Query: 59 ALCQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNV 118
++Y+ I + S RP + AD+A++ F GDHL LLNV
Sbjct: 833 LASEKYSCSEEILTVAAMLSVNNSIFY----RPKDKVVHADNARVNFFLPGGDHLVLLNV 888
Query: 119 YHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIR 178
Y + ++ QWCY+NFV +RS++ A +VR+QL +++R + SS + DY I +R
Sbjct: 889 YTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ---GDY-IRVR 944
Query: 179 KSLVTGFFMQLIIVL--AY-PISSLPTV------SLDQEDPQW 212
K++ G+F + Y + TV SL +E P+W
Sbjct: 945 KAITAGYFYHTARLTRSGYRTVKQQQTVFIHPNSSLFEEQPRW 987
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 24/57 (42%), Positives = 39/57 (68%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
QWCY+NFV +RS++ A +VR+QL +++R + SS + DY I +RK++ G+F
Sbjct: 900 QWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ---GDY-IRVRKAITAGYF 952
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 200 (75.5 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 65/223 (29%), Positives = 107/223 (47%)
Query: 1 MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSC-FAPRVADN-LDPIA 58
+ +H ++ + T L++LE Q+ LG+ N + LTT+ A D L +
Sbjct: 774 LGIHDLMHFDFLDPPPYETLLLALE-QLYALGALNHLGELTTSGRKMAELPVDPMLSKMI 832
Query: 59 ALCQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNV 118
++Y+ I + S RP + AD+A++ F GDHL LLNV
Sbjct: 833 LASEKYSCSEEILTVAAMLSVNNSIFY----RPKDKVVHADNARVNFFLPGGDHLVLLNV 888
Query: 119 YHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIR 178
Y + ++ QWCY+NFV +RS++ A +VR+QL +++R + SS + DY I +R
Sbjct: 889 YTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ---GDY-IRVR 944
Query: 179 KSLVTGFFMQLIIVL--AY-PISSLPTV------SLDQEDPQW 212
K++ G+F + Y + TV SL +E P+W
Sbjct: 945 KAITAGYFYHTARLTRSGYRTVKQQQTVFIHPNSSLFEEQPRW 987
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 24/57 (42%), Positives = 39/57 (68%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
QWCY+NFV +RS++ A +VR+QL +++R + SS + DY I +RK++ G+F
Sbjct: 900 QWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ---GDY-IRVRKAITAGYF 952
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 200 (75.5 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 65/223 (29%), Positives = 107/223 (47%)
Query: 1 MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSC-FAPRVADN-LDPIA 58
+ +H ++ + T L++LE Q+ LG+ N + LTT+ A D L +
Sbjct: 774 LGIHDLMHFDFLDPPPYETLLLALE-QLYALGALNHLGELTTSGRKMAELPVDPMLSKMI 832
Query: 59 ALCQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNV 118
++Y+ I + S RP + AD+A++ F GDHL LLNV
Sbjct: 833 LASEKYSCSEEILTVAAMLSVNNSIFY----RPKDKVVHADNARVNFFLPGGDHLVLLNV 888
Query: 119 YHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIR 178
Y + ++ QWCY+NFV +RS++ A +VR+QL +++R + SS + DY I +R
Sbjct: 889 YTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ---GDY-IRVR 944
Query: 179 KSLVTGFFMQLIIVL--AY-PISSLPTV------SLDQEDPQW 212
K++ G+F + Y + TV SL +E P+W
Sbjct: 945 KAITAGYFYHTARLTRSGYRTVKQQQTVFIHPNSSLFEEQPRW 987
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 24/57 (42%), Positives = 39/57 (68%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
QWCY+NFV +RS++ A +VR+QL +++R + SS + DY I +RK++ G+F
Sbjct: 900 QWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ---GDY-IRVRKAITAGYF 952
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 200 (75.5 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 49/140 (35%), Positives = 71/140 (50%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP E + AD + +F +GDHLTLL VY A+K WC++NF+ RSL+ A +VR
Sbjct: 970 RPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVR 1029
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ----------LIIVLAYPISS 199
+QL IMD++ L T+ + IRK++ GFF +V P+
Sbjct: 1030 KQLLSIMDKYKLD----VVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYI 1085
Query: 200 LPTVSLDQEDPQWC-YDNFV 218
P+ +L Q P W Y + V
Sbjct: 1086 HPSSALFQRQPDWVIYHDLV 1105
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 200 (75.5 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 44/98 (44%), Positives = 62/98 (63%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP E ++ AD K +F GDHLTLLNVY+A+K++ WCY+NF+ R ++ A +VR
Sbjct: 1032 RPKEKQQQADQKKAKFHDPHGDHLTLLNVYNAWKRSGFSNAWCYENFIQARQIRRAQDVR 1091
Query: 150 QQLSRIMDRFNLKRSST-EFTSKDYYINIRKSLVTGFF 186
QQL IM R++ K S T+K +R++L TGFF
Sbjct: 1092 QQLLGIMQRYHHKIVSCGRNTTK-----VRQALCTGFF 1124
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 196 (74.1 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 55/188 (29%), Positives = 96/188 (51%)
Query: 1 MSLHPIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSC-FAPRVADN-LDPIA 58
+ +H ++ + T L++LE Q+ LG+ N + LTT+ A D L +
Sbjct: 773 LGIHDLMHFDFLDPPPYETLLLALE-QLYALGALNHLGELTTSGRKMAELPVDPMLSKMI 831
Query: 59 ALCQRYNIPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNV 118
++Y+ I + S RP + AD+A++ F GDHL LLNV
Sbjct: 832 LASEKYSCSEEILTVAAMLSVNNSIFY----RPKDKVVHADNARVNFFLPGGDHLVLLNV 887
Query: 119 YHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIR 178
Y + ++ QWCY+NFV +RS++ A +VR+QL +++R + +S + DY + +R
Sbjct: 888 YTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLTSCQ---GDY-VRVR 943
Query: 179 KSLVTGFF 186
K++ +G+F
Sbjct: 944 KAITSGYF 951
Score = 123 (48.4 bits), Expect = 0.00023, P = 0.00023
Identities = 22/57 (38%), Positives = 40/57 (70%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
QWCY+NFV +RS++ A +VR+QL +++R + +S + DY + +RK++ +G+F
Sbjct: 899 QWCYENFVQFRSMRRARDVREQLEGLLERVEVGLTSCQ---GDY-VRVRKAITSGYF 951
Score = 43 (20.2 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 269 QDYYINIRKSLVTGFF 284
Q Y+ +RK++ +G+F
Sbjct: 936 QGDYVRVRKAITSGYF 951
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 199 (75.1 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 41/97 (42%), Positives = 60/97 (61%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP E + AD K +F +GDHLTLLNVY+A+KQ++ WC +NF+ +R+L A +VR
Sbjct: 997 RPKEKQTQADAKKAKFHDPNGDHLTLLNVYNAWKQSRYSKPWCAENFIQFRALTRARDVR 1056
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
Q+ RIM RF + S + +R++L +GFF
Sbjct: 1057 NQIERIMQRFKYQVMSCGSDTN----RVRQALCSGFF 1089
>WB|WBGene00022433 [details] [associations]
symbol:Y108F1.5 species:6239 "Caenorhabditis elegans"
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000210
InterPro:IPR007502 InterPro:IPR013069 Pfam:PF00651 Pfam:PF04408
SMART:SM00225 SMART:SM00847 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0004386 eggNOG:COG1643 EMBL:FO080095
GeneTree:ENSGT00390000016595 RefSeq:NP_872264.1 UniGene:Cel.28964
ProteinModelPortal:Q8MXK2 SMR:Q8MXK2 STRING:Q8MXK2
EnsemblMetazoa:Y108F1.5 GeneID:353490 KEGG:cel:CELE_Y108F1.5
UCSC:Y108F1.5 CTD:353490 WormBase:Y108F1.5 InParanoid:Q8MXK2
NextBio:953851 Uniprot:Q8MXK2
Length = 330
Score = 186 (70.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 38/96 (39%), Positives = 58/96 (60%)
Query: 82 MKLIQEA-ARPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYR 140
M IQ+ P + AD + +FA +G+H+T+LNV+ F +N +WC D+FVNYR
Sbjct: 59 MMQIQDVFITPYRQRHQADVIRKKFAVEEGNHITMLNVFTKFVENGRSKKWCSDHFVNYR 118
Query: 141 SLKSADNVRQQLSRIMDRFNLKRSSTE--FTSKDYY 174
L ADNVR QL R++ RF +++ S+ +T D +
Sbjct: 119 GLMRADNVRSQLVRLLKRFEIEKVSSRGHYTKVDIF 154
Score = 118 (46.6 bits), Expect = 0.00016, P = 0.00016
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTE--FTSKDYY 255
+WC D+FVNYR L ADNVR QL R++ RF +++ S+ +T D +
Sbjct: 108 KWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGHYTKVDIF 154
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 191 (72.3 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 38/97 (39%), Positives = 57/97 (58%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP + AD A+ F H+ GDHL+LL VY+ + + QWCY+NF+ YRS+K A +VR
Sbjct: 709 RPKDKIIHADTARKNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVR 768
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
+QL +M R + S + +N+RK+ G+F
Sbjct: 769 EQLVGLMQRVEIDMVSCLPET----VNVRKAATAGYF 801
Score = 117 (46.2 bits), Expect = 0.00088, P = 0.00088
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
QWCY+NF+ YRS+K A +VR+QL +M R + S + +N+RK+ G+F
Sbjct: 749 QWCYENFIQYRSMKRARDVREQLVGLMQRVEIDMVSCLPET----VNVRKAATAGYF 801
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 190 (71.9 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 39/97 (40%), Positives = 59/97 (60%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP + AD+A+M F GDHL LLNVY + ++ QWC++NF+ +RS+K A +VR
Sbjct: 869 RPKDKVVHADNARMNFVVPGGDHLVLLNVYTQWVESGYSTQWCFENFIQFRSMKRARDVR 928
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
QL +MDR ++ S+ S + IRK++ G+F
Sbjct: 929 DQLEGLMDRIEVELCSSNGDS----MPIRKAVTAGYF 961
Score = 119 (46.9 bits), Expect = 0.00064, P = 0.00064
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
QWC++NF+ +RS+K A +VR QL +MDR ++ S+ S + IRK++ G+F
Sbjct: 909 QWCFENFIQFRSMKRARDVRDQLEGLMDRIEVELCSSNGDS----MPIRKAVTAGYF 961
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 190 (71.9 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 38/97 (39%), Positives = 61/97 (62%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP + AAD A+ F H GDHLTL+NV++ ++++ QWC++NF+ +RS+K A +VR
Sbjct: 923 RPKDKAFAADAARKLFFHPQGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVR 982
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
QL +++R + S + D +IRK + +GFF
Sbjct: 983 DQLELLLERVEIPLVS----NVDDTDSIRKCIASGFF 1015
>UNIPROTKB|A7MBI4 [details] [associations]
symbol:DHX32 "DHX32 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
EMBL:DAAA02059534 EMBL:DAAA02059535 EMBL:DAAA02059536 EMBL:BC151578
IPI:IPI00715161 RefSeq:NP_001094614.1 UniGene:Bt.44006
Ensembl:ENSBTAT00000007619 GeneID:532978 KEGG:bta:532978
InParanoid:A7MBI4 NextBio:20875863 Uniprot:A7MBI4
Length = 744
Score = 187 (70.9 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 39/106 (36%), Positives = 64/106 (60%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ---NQEDP----QWCYDNFVNYRSLK 143
P A++AA F H DGDH TL+N+Y A++ N +WC+D F+N +L+
Sbjct: 524 PRGAEEAALSCWKTFLHPDGDHFTLINIYKAYQDMTLNAASEHCVEKWCHDYFLNCSALR 583
Query: 144 SADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
+A+ +R +L I+ R L + F SK+ +NI+K+L++G+FMQ+
Sbjct: 584 TAEVIRAELLEIIKRIELPYTEPAFGSKENTLNIKKALLSGYFMQI 629
Score = 131 (51.2 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 29/84 (34%), Positives = 50/84 (59%)
Query: 186 FMQLIIVLAYPISSLPTVSLDQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRS 245
F + I AY +L S + +WC+D F+N +L++A+ +R +L I+ R L +
Sbjct: 546 FTLINIYKAYQDMTLNAAS-EHCVEKWCHDYFLNCSALRTAEVIRAELLEIIKRIELPYT 604
Query: 246 STEFTSKDYYINIRKSLVTGFFMQ 269
F SK+ +NI+K+L++G+FMQ
Sbjct: 605 EPAFGSKENTLNIKKALLSGYFMQ 628
Score = 37 (18.1 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 124 QNQEDPQWC--YDNFVNYR 140
++ + PQWC Y ++YR
Sbjct: 91 KSSQVPQWCAEYCLSIDYR 109
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 187 (70.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 40/97 (41%), Positives = 55/97 (56%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP + + AD K RF H GDHLTLLNV+ ++ +N WC DNF+ RS++ A VR
Sbjct: 795 RPKDKQALADQRKSRFHHSLGDHLTLLNVFQSWCRNNYSKTWCRDNFIQERSMRRAMEVR 854
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
+QL IM RF K S D +R++ +G+F
Sbjct: 855 KQLKSIMQRFGYKTMSCG-NDVD---RVRRTFCSGYF 887
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 187 (70.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 39/99 (39%), Positives = 60/99 (60%)
Query: 90 RPNEAKKAADDAKMRFAHID--GDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADN 147
RP + + AD+A+M F H GDH+ LL VY ++K+ QWCY+N++ RS+K A +
Sbjct: 860 RPKDKQVHADNARMNF-HTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARD 918
Query: 148 VRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
+R QL +++R + SS D ++RKS+V GFF
Sbjct: 919 IRDQLEGLLERVEIDISSN-LNELD---SVRKSIVAGFF 953
Score = 118 (46.6 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
QWCY+N++ RS+K A ++R QL +++R + SS D ++RKS+V GFF
Sbjct: 901 QWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSN-LNELD---SVRKSIVAGFF 953
Score = 45 (20.9 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 13/59 (22%), Positives = 28/59 (47%)
Query: 123 KQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSL 181
KQ +D Q+ +++ +N+ +K + + MD + E T+ + +R+SL
Sbjct: 348 KQASDDYQFVFEDQINF--IKESVMAGENYEDAMDAKQKSQDLAEKTALEELQEVRRSL 404
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 188 (71.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 36/98 (36%), Positives = 58/98 (59%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP AD K +F GD +T LN+Y+ +K+N WC++NF+ R+LK A +VR
Sbjct: 1087 RPQNKALLADKKKNKFIMPQGDLITYLNIYNKWKENSFSNYWCHENFIQSRALKRAQDVR 1146
Query: 150 QQLSRIMDRFNLK-RSSTEFTSKDYYINIRKSLVTGFF 186
+Q+ I +++N + + ST Y+NI KS+ +G+F
Sbjct: 1147 KQMLSIFEKYNYQVKKSTSKNDATKYVNICKSICSGYF 1184
Score = 125 (49.1 bits), Expect = 0.00017, P = 0.00017
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 212 WCYDNFVNYRSLKSADNVRQQLSRIMDRFNLK-RSSTEFTSKDYYINIRKSLVTGFF 267
WC++NF+ R+LK A +VR+Q+ I +++N + + ST Y+NI KS+ +G+F
Sbjct: 1128 WCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVKKSTSKNDATKYVNICKSICSGYF 1184
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 188 (71.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 36/98 (36%), Positives = 58/98 (59%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP AD K +F GD +T LN+Y+ +K+N WC++NF+ R+LK A +VR
Sbjct: 1087 RPQNKALLADKKKNKFIMPQGDLITYLNIYNKWKENSFSNYWCHENFIQSRALKRAQDVR 1146
Query: 150 QQLSRIMDRFNLK-RSSTEFTSKDYYINIRKSLVTGFF 186
+Q+ I +++N + + ST Y+NI KS+ +G+F
Sbjct: 1147 KQMLSIFEKYNYQVKKSTSKNDATKYVNICKSICSGYF 1184
Score = 125 (49.1 bits), Expect = 0.00017, P = 0.00017
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 212 WCYDNFVNYRSLKSADNVRQQLSRIMDRFNLK-RSSTEFTSKDYYINIRKSLVTGFF 267
WC++NF+ R+LK A +VR+Q+ I +++N + + ST Y+NI KS+ +G+F
Sbjct: 1128 WCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVKKSTSKNDATKYVNICKSICSGYF 1184
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 182 (69.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 39/99 (39%), Positives = 61/99 (61%)
Query: 95 KKAADDAKMRFAHIDGDHLTLLNVYHAF-KQNQEDPQWCYDNFVNYRSLKSADNVRQQLS 153
KK+++ ++ +FA +GDHLT LNVY AF + +++ +WC DN +NYRSL A +VR QL
Sbjct: 499 KKSSESSRRKFAVEEGDHLTYLNVYQAFVTKGKKESKWCRDNLLNYRSLLRAVSVRAQLK 558
Query: 154 RIMDRFNLKRSST---EFTSKDYYI---NIRKSLVTGFF 186
R ++RF ++ T + D I++ L TG+F
Sbjct: 559 RYLERFGIQVDETFPSHYNKSDLSKPAEKIQRCLTTGYF 597
Score = 41 (19.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 18 RTDLVSLESQMATLGSDNIV 37
R++L + Q+ LG DNIV
Sbjct: 394 RSNLAPVIMQLKALGIDNIV 413
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 184 (69.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 39/111 (35%), Positives = 66/111 (59%)
Query: 76 LQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDN 135
L +M++ P+ K A A +FA +GDHLT+LNVY AF ++ ++ QWC ++
Sbjct: 509 LSIAAMMQIQNVFVVPSNQKSQAIRAHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEH 568
Query: 136 FVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
F+NY+ L A VR+QL +++ +F + + S+E D + + +V+GFF
Sbjct: 569 FLNYKGLVRAATVREQLKKLLVKFQVPKKSSE-GDPD---PVLRCIVSGFF 615
>UNIPROTKB|F1PER1 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 GO:GO:0005524 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
EMBL:AAEX03015636 RefSeq:XP_003433686.1 Ensembl:ENSCAFT00000020520
GeneID:100685023 KEGG:cfa:100685023 Uniprot:F1PER1
Length = 745
Score = 184 (69.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 39/106 (36%), Positives = 65/106 (61%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ----NQED---PQWCYDNFVNYRSLK 143
P+ A++AA F H +GDH TL+N+Y A++ + D +WC+D F+N +L+
Sbjct: 524 PHGAEEAALTCWKTFLHPEGDHFTLINIYKAYQDIALNSTSDHCVEKWCHDYFLNCCALR 583
Query: 144 SADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
AD +R +L I+ R L + F SK+ +NI+K+L++G+FMQ+
Sbjct: 584 MADVIRAELLEIVKRIELPCAEPAFGSKENALNIKKALLSGYFMQI 629
Score = 134 (52.2 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 186 FMQLIIVLAYPISSLPTVSLDQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRS 245
F + I AY +L + S D +WC+D F+N +L+ AD +R +L I+ R L +
Sbjct: 546 FTLINIYKAYQDIALNSTS-DHCVEKWCHDYFLNCCALRMADVIRAELLEIVKRIELPCA 604
Query: 246 STEFTSKDYYINIRKSLVTGFFMQ 269
F SK+ +NI+K+L++G+FMQ
Sbjct: 605 EPAFGSKENALNIKKALLSGYFMQ 628
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 189 (71.6 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 39/97 (40%), Positives = 59/97 (60%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP E + AD K +F +GDHLTLL VY+++K + WC++NF+ RS+K A ++R
Sbjct: 995 RPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIR 1054
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
+QL IMDR L S +D ++K++ +GFF
Sbjct: 1055 KQLLGIMDRHKLLMVSC---GRDVS-RVQKAICSGFF 1087
Score = 37 (18.1 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 18 RTDLVSLESQMATLGSDNIV 37
RT+L S Q+ +G +N++
Sbjct: 897 RTNLASTLLQLKAMGINNLI 916
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 189 (71.6 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 39/97 (40%), Positives = 59/97 (60%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP E + AD K +F +GDHLTLL VY+++K + WC++NF+ RS+K A ++R
Sbjct: 995 RPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIR 1054
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
+QL IMDR L S +D ++K++ +GFF
Sbjct: 1055 KQLLGIMDRHKLLMVSC---GRDVS-RVQKAICSGFF 1087
Score = 37 (18.1 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 18 RTDLVSLESQMATLGSDNIV 37
RT+L S Q+ +G +N++
Sbjct: 897 RTNLASTLLQLKAMGINNLI 916
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 183 (69.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 39/106 (36%), Positives = 65/106 (61%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ---NQEDPQ----WCYDNFVNYRSLK 143
P+ A++AA F H +GDH TL+NVY+A++ N + WC+D F++ +L+
Sbjct: 524 PHGAEEAAVTCWKTFLHPEGDHFTLINVYNAYQDTVLNSANEHCVEMWCHDCFLSCSALR 583
Query: 144 SADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
AD +R +L I+ R L + F SK+ +NI+K+L++G+FMQ+
Sbjct: 584 MADVIRAELLEIIKRIELPYAEPAFGSKENGLNIKKALLSGYFMQI 629
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 23/58 (39%), Positives = 39/58 (67%)
Query: 212 WCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 269
WC+D F++ +L+ AD +R +L I+ R L + F SK+ +NI+K+L++G+FMQ
Sbjct: 571 WCHDCFLSCSALRMADVIRAELLEIIKRIELPYAEPAFGSKENGLNIKKALLSGYFMQ 628
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 185 (70.2 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 42/98 (42%), Positives = 58/98 (59%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP + + AD K +F H GDHLTLLNVY ++Q Q+C NF+++R LK A +V+
Sbjct: 938 RPKDRQLEADSKKAKFHHPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVK 997
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFM 187
Q+S I + LK S + D IRK+ V+GFFM
Sbjct: 998 SQISMIFKKIGLKLISCH-SDPDL---IRKTFVSGFFM 1031
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 181 (68.8 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 37/96 (38%), Positives = 61/96 (63%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQ 150
PN+ K A +FA +GDHLT+LN+Y AF ++ +D +WC ++F+NY+ L A VR+
Sbjct: 494 PNQ-KSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVRE 552
Query: 151 QLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
QL +++ +F + R S+E D + + +V+GFF
Sbjct: 553 QLKKLLVKFQVPRKSSE-GDPDLVL---RCIVSGFF 584
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 181 (68.8 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 37/96 (38%), Positives = 61/96 (63%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQ 150
PN+ K A +FA +GDHLT+LN+Y AF ++ +D +WC ++F+NY+ L A VR+
Sbjct: 525 PNQ-KSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVRE 583
Query: 151 QLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
QL +++ +F + R S+E D + + +V+GFF
Sbjct: 584 QLKKLLVKFQVPRKSSE-GDPDLVL---RCIVSGFF 615
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 181 (68.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 37/96 (38%), Positives = 61/96 (63%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQ 150
PN+ K A +FA +GDHLT+LN+Y AF ++ +D +WC ++F+NY+ L A VR+
Sbjct: 525 PNQ-KSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVRE 583
Query: 151 QLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
QL +++ +F + R S+E D + + +V+GFF
Sbjct: 584 QLKKLLVKFQVPRKSSE-GDPDLVL---RCIVSGFF 615
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 183 (69.5 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 31/71 (43%), Positives = 51/71 (71%)
Query: 89 ARPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNV 148
+RP E ++ AD + +FA+ + DHLTLLNVY +K N+ WCY++++ R ++ A++V
Sbjct: 965 SRPREKQQEADRQRAQFANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDV 1024
Query: 149 RQQLSRIMDRF 159
R+QL R+MDR+
Sbjct: 1025 RKQLIRLMDRY 1035
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 179 (68.1 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 36/96 (37%), Positives = 60/96 (62%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQ 150
P+ K A +FA +GDHLT+LNVY AF ++ ++ QWC ++F+NY+ L A VR+
Sbjct: 524 PSNQKSQAIRVHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVRE 583
Query: 151 QLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
QL +++ +F + + S+E D + + +V+GFF
Sbjct: 584 QLKKLLVKFQVPKKSSE-GDPD---PVLRCIVSGFF 615
>UNIPROTKB|F1SDM5 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
OMA:LACEQDI EMBL:CT841550 Ensembl:ENSSSCT00000011756 Uniprot:F1SDM5
Length = 742
Score = 179 (68.1 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 39/106 (36%), Positives = 62/106 (58%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ---NQEDP----QWCYDNFVNYRSLK 143
P+ A+ A F H +GDH TL+N+Y AF+ N +WC+D F+N +L+
Sbjct: 525 PSGAEAEALTCWKTFLHPEGDHFTLVNLYKAFQDVTLNSTSEHCVEKWCHDYFLNCSALR 584
Query: 144 SADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
AD +R +L I+ R L + F SK+ +NI+K+L++G+FMQ+
Sbjct: 585 MADVIRAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQI 630
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 24/59 (40%), Positives = 40/59 (67%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 269
+WC+D F+N +L+ AD +R +L I+ R L + F SK+ +NI+K+L++G+FMQ
Sbjct: 571 KWCHDYFLNCSALRMADVIRAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQ 629
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 178 (67.7 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 38/111 (34%), Positives = 63/111 (56%)
Query: 76 LQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDN 135
L +M++ P+ K A +FA +GDHLT+LNVY AF ++ + QWC ++
Sbjct: 509 LSIAAMMQIQNVFVFPSNQKSQATRVHRKFAVEEGDHLTMLNVYEAFIKHNKSSQWCQEH 568
Query: 136 FVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
F+NY+ L A VR QL +++ +F + + S+E D + + +V+GFF
Sbjct: 569 FLNYKGLVRAATVRDQLKKLLVKFQVPKMSSE-GDPD---PVLRCIVSGFF 615
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 178 (67.7 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 38/111 (34%), Positives = 63/111 (56%)
Query: 76 LQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDN 135
L +M++ P+ K A +FA +GDHLT+LNVY AF ++ + QWC ++
Sbjct: 509 LSIAAMMQIQNVFVFPSNQKSQATRVHRKFAVEEGDHLTMLNVYEAFIKHNKSSQWCQEH 568
Query: 136 FVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
F+NY+ L A VR QL +++ +F + + S+E D + + +V+GFF
Sbjct: 569 FLNYKGLVRAATVRDQLKKLLVKFQVPKMSSE-GDPD---PVLRCIVSGFF 615
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 180 (68.4 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 37/99 (37%), Positives = 59/99 (59%)
Query: 90 RPNEAKKAADDAKMRFAHID--GDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADN 147
RP + + AD+A F H+ GDH+ L +Y+++K+ QWCY+N++ RS+K A +
Sbjct: 860 RPKDKQVHADNAMKNF-HVGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKRARD 918
Query: 148 VRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
+R QL +++R + SS D +IRKS+V GFF
Sbjct: 919 IRDQLEGLLERVEIDVSSNA-NELD---SIRKSIVAGFF 953
Score = 118 (46.6 bits), Expect = 0.00082, P = 0.00082
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 211 QWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 267
QWCY+N++ RS+K A ++R QL +++R + SS D +IRKS+V GFF
Sbjct: 901 QWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSSNA-NELD---SIRKSIVAGFF 953
>UNIPROTKB|Q7L7V1 [details] [associations]
symbol:DHX32 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32" species:9606 "Homo sapiens"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 PROSITE:PS51194 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 EMBL:CH471066 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 EMBL:AY064247 EMBL:AL360176
UniGene:Hs.370292 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOVERGEN:HBG039428 EMBL:AF427340 EMBL:AF427341 EMBL:AY064250
EMBL:AK001556 EMBL:AK001751 EMBL:AK024869 EMBL:BC002473
EMBL:BC037925 EMBL:BC068471 EMBL:AL162051 IPI:IPI00334601
IPI:IPI00644447 PIR:T47184 RefSeq:NP_060650.2
ProteinModelPortal:Q7L7V1 SMR:Q7L7V1 IntAct:Q7L7V1 STRING:Q7L7V1
PhosphoSite:Q7L7V1 DMDM:74759011 PRIDE:Q7L7V1 DNASU:55760
Ensembl:ENST00000284688 Ensembl:ENST00000284690
Ensembl:ENST00000368721 Ensembl:ENST00000415732 GeneID:55760
KEGG:hsa:55760 UCSC:uc001lje.1 UCSC:uc001ljf.1 CTD:55760
GeneCards:GC10M127515 HGNC:HGNC:16717 HPA:HPA048872 MIM:607960
neXtProt:NX_Q7L7V1 PharmGKB:PA27219 InParanoid:Q7L7V1 OMA:LACEQDI
OrthoDB:EOG4N30NF PhylomeDB:Q7L7V1 ChiTaRS:DHX32 GenomeRNAi:55760
NextBio:60779 Bgee:Q7L7V1 Genevestigator:Q7L7V1 Uniprot:Q7L7V1
Length = 743
Score = 178 (67.7 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 38/106 (35%), Positives = 63/106 (59%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ---NQEDP----QWCYDNFVNYRSLK 143
P+ A++AA F H +GDH TL+++Y A++ N +WC D F+N +L+
Sbjct: 523 PHGAEEAALTCWKTFLHPEGDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALR 582
Query: 144 SADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
AD +R +L I+ R L + F SK+ +NI+K+L++G+FMQ+
Sbjct: 583 MADVIRAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQI 628
Score = 130 (50.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 30/84 (35%), Positives = 50/84 (59%)
Query: 186 FMQLIIVLAYPISSLPTVSLDQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRS 245
F + I AY ++L + S + +WC D F+N +L+ AD +R +L I+ R L +
Sbjct: 545 FTLISIYKAYQDTTLNSSS-EYCVEKWCRDYFLNCSALRMADVIRAELLEIIKRIELPYA 603
Query: 246 STEFTSKDYYINIRKSLVTGFFMQ 269
F SK+ +NI+K+L++G+FMQ
Sbjct: 604 EPAFGSKENTLNIKKALLSGYFMQ 627
>UNIPROTKB|H0Y9D2 [details] [associations]
symbol:SEPSECS "O-phosphoseryl-tRNA(Sec) selenium
transferase" species:9606 "Homo sapiens" [GO:0016785 "transferase
activity, transferring selenium-containing groups" evidence=IEA]
[GO:0097056 "selenocysteinyl-tRNA(Sec) biosynthetic process"
evidence=IEA] InterPro:IPR008829 InterPro:IPR019872 Pfam:PF05889
GO:GO:0016785 PANTHER:PTHR12944 EMBL:AC007073 EMBL:AC104662
HGNC:HGNC:30605 Ensembl:ENST00000503150 Uniprot:H0Y9D2
Length = 95
Score = 154 (59.3 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 5 PIVIETLMSGDELRTDLVSLESQMATLGSDNIVCVLTTTSCFAPRVAD 52
P+VIE ++ GDELRTDL ++E+++ LG D I+C+ +TTSCFAPRV D
Sbjct: 25 PVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPD 72
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 177 (67.4 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 36/96 (37%), Positives = 59/96 (61%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQ 150
P K A +FA +GDHLT+LNVY AF ++ ++ QWC ++F+NY+ L A VR+
Sbjct: 516 PGNQKSQAIRVHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLIRAATVRE 575
Query: 151 QLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
QL +++ +F + + S+E D + + +V+GFF
Sbjct: 576 QLKKLLVKFQVPKKSSE-GDPD---PVLRCIVSGFF 607
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 177 (67.4 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 36/96 (37%), Positives = 59/96 (61%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQ 150
P K A +FA +GDHLT+LNVY AF ++ ++ QWC ++F+NY+ L A VR+
Sbjct: 524 PGNQKSQAIRVHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLIRAATVRE 583
Query: 151 QLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
QL +++ +F + + S+E D + + +V+GFF
Sbjct: 584 QLKKLLVKFQVPKKSSE-GDPD---PVLRCIVSGFF 615
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 177 (67.4 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 37/96 (38%), Positives = 61/96 (63%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQ 150
PN+ +AA + +FA +GDHLT+LNVY AF ++ + QWC ++F+NY+ L A VR+
Sbjct: 527 PNQKSQAARQHR-KFAVEEGDHLTMLNVYEAFVKHSKSSQWCQEHFLNYKGLVRASVVRE 585
Query: 151 QLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
QL +++ F + + S+E D + + +V+GFF
Sbjct: 586 QLKKLLVCFKVPKKSSE-GDPD---PVLRCIVSGFF 617
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 173 (66.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 36/106 (33%), Positives = 65/106 (61%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ---NQEDPQ----WCYDNFVNYRSLK 143
P+ A++AA F H +GDH TL+N+Y+A++ N + WC++ F++ +L+
Sbjct: 531 PHGAEEAAVTCWKTFLHPEGDHFTLINIYNAYQDTVLNSANEHCVETWCHNCFLSCSALR 590
Query: 144 SADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
AD +R +L I+ R L + F S++ +NI+K+L++G+FMQ+
Sbjct: 591 MADVIRAELLEIIKRIELPYAEPAFGSQENGLNIKKALLSGYFMQI 636
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 171 (65.3 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 36/101 (35%), Positives = 62/101 (61%)
Query: 92 NEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQ 151
+E + A A +F GDHLTLLNV++ F ++++ WC+DN++N RSL A NVR+Q
Sbjct: 530 SEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLKSEKPKMWCHDNYLNLRSLTYARNVRRQ 589
Query: 152 LSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQLIIV 192
L I + +L +S++ D + ++K ++ GFF + ++
Sbjct: 590 LREISEHLHLALNSSD----DIEM-LKKCILNGFFENIAVL 625
>UNIPROTKB|I3LG93 [details] [associations]
symbol:DQX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
Ensembl:ENSSSCT00000026262 OMA:IRTVTHI Uniprot:I3LG93
Length = 278
Score = 162 (62.1 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 34/94 (36%), Positives = 57/94 (60%)
Query: 98 ADDAKMRFA--HIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRI 155
A++A +R A H+DGDH +L+ VY AF Q+ D WC +N+ +L A +R +L +
Sbjct: 71 AEEAALRRALEHVDGDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQACKLRGELLEL 130
Query: 156 MDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
M R L S F S+ +++K+LV+G+F+++
Sbjct: 131 MQRIELPLSPPAFGSEQNRRDLQKALVSGYFLKV 164
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 169 (64.5 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 38/104 (36%), Positives = 58/104 (55%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQN--QEDPQWCYDNFVNYRSLKSADNV 148
P E KK +D K F DGDH+T LNV+ F+++ Q+ QWC+D+F+N +S+ NV
Sbjct: 543 PKEKKKEVEDVKKIFFSPDGDHITFLNVFREFQKSKPQQQQQWCFDHFINLKSMIKVLNV 602
Query: 149 RQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQLIIV 192
+QL + +LK S + I+KS + GFF+ I+
Sbjct: 603 FEQLVKYC--ISLKLPIVSCGSD--FDRIKKSFIGGFFLNTAIL 642
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 167 (63.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 34/97 (35%), Positives = 58/97 (59%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP AD A+ F GDH+TL+NVY+ ++++ +WC +N+V +R++K A +VR
Sbjct: 822 RPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVR 881
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
QL +++R ++ S+ T I IRK++ G+F
Sbjct: 882 DQLVGLLERVEIETKSSTDT-----IKIRKAITAGYF 913
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 167 (63.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 34/97 (35%), Positives = 58/97 (59%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP AD A+ F GDH+TL+NVY+ ++++ +WC +N+V +R++K A +VR
Sbjct: 822 RPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVR 881
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
QL +++R ++ S+ T I IRK++ G+F
Sbjct: 882 DQLVGLLERVEIETKSSTDT-----IKIRKAITAGYF 913
>UNIPROTKB|F1NH89 [details] [associations]
symbol:LOC768812 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 OMA:LACEQDI EMBL:AADN02057061
EMBL:AADN02057062 IPI:IPI00683398 Ensembl:ENSGALT00000023318
Uniprot:F1NH89
Length = 764
Score = 165 (63.1 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 35/107 (32%), Positives = 66/107 (61%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQ---NQ-----EDPQWCYDNFVNYRSL 142
P+ ++ A +F+H GDH TL+NV++AF++ N + +WC + F++ +L
Sbjct: 535 PSGTEEIALTCWRKFSHPAGDHFTLINVFNAFREASTNSAGQCCSNEKWCRNYFLSCSAL 594
Query: 143 KSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
+ A+ +R +L IM R L S+ +F S + ++I+K+L++G+FMQ+
Sbjct: 595 RMAEMIRAELVEIMKRIELPISAPDFGSPENTLSIKKALLSGYFMQI 641
>UNIPROTKB|Q3ZBE0 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0004386
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 EMBL:BC103411 IPI:IPI00704154
RefSeq:NP_001030399.1 UniGene:Bt.49583 PRIDE:Q3ZBE0
Ensembl:ENSBTAT00000033191 GeneID:517947 KEGG:bta:517947 CTD:165545
InParanoid:Q3ZBE0 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3
NextBio:20872543 Uniprot:Q3ZBE0
Length = 719
Score = 162 (62.1 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 34/94 (36%), Positives = 57/94 (60%)
Query: 98 ADDAKMRFA--HIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRI 155
A++A +R A H+DGDH +L+ VY AF Q+ D WC +N+ +L A +R +L +
Sbjct: 512 AEEAALRRALEHVDGDHSSLIQVYEAFIQSGADKAWCQARGLNWAALCQARKLRGELLEL 571
Query: 156 MDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
M R L S F S+ +++K+LV+G+F+++
Sbjct: 572 MQRIELPLSQPAFGSERNRRDLQKALVSGYFLKV 605
>MGI|MGI:2136388 [details] [associations]
symbol:Dqx1 "DEAQ RNA-dependent ATPase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=ISA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 MGI:MGI:2136388 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 GO:GO:0016887 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AF318278 EMBL:BC048936 EMBL:BC075680
IPI:IPI00125675 IPI:IPI00844713 RefSeq:NP_291084.1
UniGene:Mm.140332 ProteinModelPortal:Q924H9 SMR:Q924H9
PhosphoSite:Q924H9 PRIDE:Q924H9 Ensembl:ENSMUST00000077502
GeneID:93838 KEGG:mmu:93838 UCSC:uc009cmc.1 UCSC:uc009cmd.1
InParanoid:Q924H9 NextBio:351693 Bgee:Q924H9 CleanEx:MM_DQX1
Genevestigator:Q924H9 Uniprot:Q924H9
Length = 718
Score = 161 (61.7 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 34/95 (35%), Positives = 56/95 (58%)
Query: 97 AADDAKMRFA--HIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSR 154
+A +A +R A H DGDH +L+ VY AF Q+ D WC +N+ SL A +R +L
Sbjct: 509 SAGEAALRRALEHADGDHSSLIQVYEAFVQSGADEAWCQARGLNWESLCQARKLRAELVE 568
Query: 155 IMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
+M R L S F S+ +++K+L++G+F+++
Sbjct: 569 LMQRIELPLSQPAFGSEQNRRDLQKALLSGYFLKV 603
>UNIPROTKB|Q8TE96 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
EMBL:AC005041 HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AK074337 EMBL:AK092420 EMBL:BC075018
IPI:IPI00385794 IPI:IPI00843897 IPI:IPI00844595 RefSeq:NP_598376.2
UniGene:Hs.191705 ProteinModelPortal:Q8TE96 SMR:Q8TE96
STRING:Q8TE96 PhosphoSite:Q8TE96 DMDM:145558898 PaxDb:Q8TE96
PRIDE:Q8TE96 Ensembl:ENST00000393951 Ensembl:ENST00000404568
GeneID:165545 KEGG:hsa:165545 UCSC:uc010yrw.2 GeneCards:GC02M074745
H-InvDB:HIX0200286 HGNC:HGNC:20410 HPA:HPA039158 neXtProt:NX_Q8TE96
PharmGKB:PA134916600 InParanoid:Q8TE96 GenomeRNAi:165545
NextBio:88548 ArrayExpress:Q8TE96 Bgee:Q8TE96 CleanEx:HS_DQX1
Genevestigator:Q8TE96 Uniprot:Q8TE96
Length = 717
Score = 160 (61.4 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 34/95 (35%), Positives = 57/95 (60%)
Query: 97 AADDAKMRFA--HIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSR 154
+A++A +R A H DGDH +L+ VY AF Q+ D WC +N+ +L A +R +L
Sbjct: 509 SAEEAALRRALEHTDGDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAHKLRGELLE 568
Query: 155 IMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
+M R L S F S+ +++K+LV+G+F+++
Sbjct: 569 LMQRIELPLSLPAFGSEQNRRDLQKALVSGYFLKV 603
>UNIPROTKB|E2QXW1 [details] [associations]
symbol:DQX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:165545 KO:K14433 OMA:CGQAVQA
EMBL:AAEX03010965 RefSeq:XP_532994.2 Ensembl:ENSCAFT00000013395
GeneID:475784 KEGG:cfa:475784 NextBio:20851558 Uniprot:E2QXW1
Length = 719
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 33/95 (34%), Positives = 57/95 (60%)
Query: 97 AADDAKMRFA--HIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSR 154
+A++A +R A H DGDH +L+ VY AF Q+ D WC +N+ +L A +R +L
Sbjct: 511 SAEEAALRRALEHADGDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAQKLRGELLE 570
Query: 155 IMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
+M + L S F S+ +++K+LV+G+F+++
Sbjct: 571 LMQQIELPLSQPAFGSEQNRRDLQKALVSGYFLKV 605
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 159 (61.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 39/108 (36%), Positives = 59/108 (54%)
Query: 81 LMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYR 140
++ + Q RP E +K AD A+ +F DHLTLLNV+ ++ N WC +FV Y+
Sbjct: 811 MLSVPQVFYRPKERQKEADIARNKFFIAKSDHLTLLNVFEQWRANNFSSHWCNKHFVQYK 870
Query: 141 SLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
SL A ++R QL I+ + S+ KD+ I I+K + +GF Q
Sbjct: 871 SLVRARDIRDQLLTILKSQKIPVISS---GKDWDI-IKKCICSGFAHQ 914
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 159 (61.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 37/98 (37%), Positives = 56/98 (57%)
Query: 90 RPNEAKKAADDAKMRFAHIDG-DHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNV 148
RP + K AD A+ RF DG DHLTLLN+++ + + W +NF+ RSL A +V
Sbjct: 938 RPKDKKIHADSARNRFTVKDGGDHLTLLNIWNQWVDSDFSYVWAKENFLQQRSLTRARDV 997
Query: 149 RQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
R QL+++ DR + SS + + I+K++ GFF
Sbjct: 998 RDQLAKLCDRVEVTVSSC---GSNNIVPIQKAITAGFF 1032
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 156 (60.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 35/97 (36%), Positives = 50/97 (51%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQ 150
P + + +F +GDHLTLLNVY AFK + +WC +NFVN R++ +VR
Sbjct: 491 PPARRDEVQSVRKKFISSEGDHLTLLNVYRAFKNVSGNKEWCKENFVNGRNMMLVSDVRA 550
Query: 151 QLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFM 187
QL I + ++ S S+ NIR+ L FM
Sbjct: 551 QLRDICVKLSMPMES----SRSDTANIRRCLAHSLFM 583
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 155 (59.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 33/100 (33%), Positives = 59/100 (59%)
Query: 95 KKAADDAKMRFAHIDGDHLTLLNVYHAF-KQNQEDPQWCYDNFVNYRSLKSADNVRQQLS 153
+K + + +FA +GDHLT LNVY AF + +++ +C++N +NY+++ A ++R QL
Sbjct: 499 RKQFESRRRKFAAGEGDHLTFLNVYQAFVTKGRKESGFCHENLLNYKTMSRAVSIRAQLK 558
Query: 154 RIMDRFNLKRSSTEFTSKDYYIN-------IRKSLVTGFF 186
R ++RF ++ T + K + IR+ L TG+F
Sbjct: 559 RYLERFGIRVDETLASGKTRGASPGVTGEQIRRCLTTGYF 598
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 157 (60.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 34/99 (34%), Positives = 54/99 (54%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP + AD + +F + DHLT LNVY ++QN WC ++F++ ++++ VR
Sbjct: 988 RPKGREDEADGVREKFQRPESDHLTYLNVYQQWRQNNYSSTWCNEHFIHIKAMRKVREVR 1047
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
QQL IM + NL S D+ I +RK + + +F Q
Sbjct: 1048 QQLKDIMTQQNLSVISCGI---DWDI-VRKCICSAYFYQ 1082
>DICTYBASE|DDB_G0268212 [details] [associations]
symbol:DDB_G0268212 "putative DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 dictyBase:DDB_G0268212 GO:GO:0005524
EMBL:AAFI02000003 GO:GO:0004386 InterPro:IPR014001 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 RefSeq:XP_647649.1
ProteinModelPortal:Q55F84 IntAct:Q55F84 EnsemblProtists:DDB0233906
GeneID:8616466 KEGG:ddi:DDB_G0268212 Uniprot:Q55F84
Length = 455
Score = 148 (57.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 29/79 (36%), Positives = 50/79 (63%)
Query: 111 DHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTE--- 167
DHLTLLNVY++F N+ P WC DN +N++++++ ++ QL + + ++K S
Sbjct: 313 DHLTLLNVYNSFISNKCSPIWCNDNQINFQTIQTVQQIKNQLLNCLTKVSVKLLSCNDDG 372
Query: 168 FTSKDYYINIRKSLVTGFF 186
+SK +I+KS ++GFF
Sbjct: 373 SSSKQSTDHIKKSFLSGFF 391
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 154 (59.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 32/82 (39%), Positives = 53/82 (64%)
Query: 109 DGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEF 168
+GDHLTLLN++++F NQ PQWC + +NY++++ VR+QL ++++ S F
Sbjct: 562 EGDHLTLLNIFNSFISNQSSPQWCNQHQINYKAMQRVLQVRKQLLAYAKKYSINVISC-F 620
Query: 169 TS---KDYYIN-IRKSLVTGFF 186
S ++ N IRK++V+GFF
Sbjct: 621 DSNNNREQCSNLIRKAIVSGFF 642
Score = 37 (18.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 18 RTDLVSLESQMATLGSDNIV 37
R++L + Q+ LG DNI+
Sbjct: 448 RSNLTNTILQLKALGIDNIL 467
>RGD|1591766 [details] [associations]
symbol:Dqx1 "DEAQ box RNA-dependent ATPase 1" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
RGD:1591766 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH473957
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
CTD:165545 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3 IPI:IPI00194915
RefSeq:NP_001102877.1 UniGene:Rn.154059 Ensembl:ENSRNOT00000011002
GeneID:680434 KEGG:rno:680434 UCSC:RGD:1591766 NextBio:718702
Uniprot:D4A474
Length = 717
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 31/94 (32%), Positives = 54/94 (57%)
Query: 98 ADDAKMR--FAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRI 155
A +A +R H DGDH +L+ VY AF Q+ D WC +++ +L A +R +L +
Sbjct: 510 AGEAALRRGLEHADGDHSSLIQVYEAFVQSGADETWCQARGLSWEALCQARKLRAELLEL 569
Query: 156 MDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQL 189
M R L S F S+ +++K+L++G+F+++
Sbjct: 570 MQRIELPLSLPAFGSEQNRRDLQKALLSGYFLKV 603
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 150 (57.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 35/99 (35%), Positives = 59/99 (59%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP E + +D A+ +F + DHL LLN+Y +++N WC +F++ ++LK A ++R
Sbjct: 946 RPKERAEESDAAREKFNVPESDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIR 1005
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
QQL IM + ++ S E S D+ I +R+ L + +F Q
Sbjct: 1006 QQLVEIMSK---QKISLESVS-DWDI-VRRVLCSAYFHQ 1039
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 148 (57.2 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 37/99 (37%), Positives = 55/99 (55%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP E ++ +D A+ +F + DHLTLL+VY +K N WC +F++ ++L+ A VR
Sbjct: 643 RPKERQEESDAAREKFFVPESDHLTLLHVYTQWKSNGYSDHWCTKHFLHAKTLRRAKEVR 702
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
QL+ IM L S T D IRK + +GF+ Q
Sbjct: 703 DQLNDIMVMQKLPLISCG-TDWD---EIRKCICSGFYHQ 737
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 148 (57.2 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 36/111 (32%), Positives = 64/111 (57%)
Query: 81 LMKLIQEAA----RPNEAKKAADDAKMRFAHIDG-DHLTLLNVYHAFKQNQEDPQWCYDN 135
++ ++ EA+ RP + + AD A+ RF +G DH+TLLN+++ + + P W +N
Sbjct: 817 IVAMLSEASALFFRPKDKQVHADAARGRFTVKEGGDHVTLLNIWNQWLDSDYSPIWSKEN 876
Query: 136 FVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
F+ RSL A +VR+QLS++ +R + S+ S I++++ GFF
Sbjct: 877 FLQQRSLTRARDVREQLSKLCERVEVTLSTCGGISN--MPPIKRAITAGFF 925
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 146 (56.5 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 38/117 (32%), Positives = 62/117 (52%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDP--QWCYDNFVNYRSLKSADNV 148
P E + A +A+++F H +GD LT LN + ++ D QWC NF+N R+LK+ ++
Sbjct: 551 PQEKRDEAIEARLKFLHSEGDLLTCLNALRQYLESSHDSRKQWCSQNFINRRALKTILDI 610
Query: 149 RQQLSR--IMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQLIIVLAYPISSLPTV 203
R+QL + D + L SS E S+ N+ S ++G+ L +P S T+
Sbjct: 611 RKQLREHCLKDGWELN-SSPEVNSE----NLLLSFLSGYITNT--ALLHPDGSYRTI 660
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 147 (56.8 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 35/124 (28%), Positives = 65/124 (52%)
Query: 69 VINNAYGL--QSTRLMKLIQEAA----RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAF 122
+ ++ YG + ++ ++ EA+ RP + AD A+ F GDHLTLL++++ +
Sbjct: 848 IASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIMEADKARANFTQPGGDHLTLLHIWNEW 907
Query: 123 KQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLV 182
W +NF+ Y+SL A +VR QL+ + +R ++ + S D I+K++
Sbjct: 908 VDTDFSYNWARENFLQYKSLCRARDVRDQLANLCERVEIELVTNSSESLD---PIKKAIT 964
Query: 183 TGFF 186
G+F
Sbjct: 965 AGYF 968
>UNIPROTKB|B4DVG8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC009087
UniGene:Hs.151218 HGNC:HGNC:17211 ChiTaRS:DHX38 EMBL:AK301074
IPI:IPI00909589 SMR:B4DVG8 STRING:B4DVG8 Ensembl:ENST00000536867
UCSC:uc010vmp.2 HOVERGEN:HBG093770 Uniprot:B4DVG8
Length = 539
Score = 144 (55.7 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 33/99 (33%), Positives = 53/99 (53%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP ++ +D + +FA + DHLT LNVY +K N WC D+F++ ++++ VR
Sbjct: 298 RPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVR 357
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
QL IM + +R S D+ I +RK + +F Q
Sbjct: 358 AQLKDIMVQ---QRMSLASCGTDWDI-VRKCICAAYFHQ 392
Score = 38 (18.4 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 250 TSKDYYINIRKSLVTGFFMQDYYINIRKSLVTGFFMQCLLGIIG 293
T +++ SL + DY + + T +MQC+ + G
Sbjct: 407 TGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDG 450
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 142 (55.0 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 34/97 (35%), Positives = 47/97 (48%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQ 150
P + + +F +GDH+TLLN+Y FK D WC +NFVN R++ A VR
Sbjct: 447 PPSRRDEVQAMRKKFLSSEGDHITLLNIYRTFKSLGGDKDWCRENFVNSRNMMLAAEVRA 506
Query: 151 QLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFM 187
QL I LK S + + +IR+ L FM
Sbjct: 507 QLRDIC----LKMSMPMVSCRGDVESIRRCLAHSLFM 539
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 142 (55.0 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 32/94 (34%), Positives = 55/94 (58%)
Query: 92 NEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQ 151
+ +K A A F +GD +T LNV+ +F N++D QWC N++NY++L+ A ++R
Sbjct: 486 SSSKNDAFVAHSSFFANEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTH 545
Query: 152 LSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGF 185
L R +++F++ ++ S D I K L+ GF
Sbjct: 546 LVRFLNKFSIP-TAQRLPSSDCS-KILKCLLDGF 577
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 31/97 (31%), Positives = 58/97 (59%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP A++ +D ++ +F + DHLTLL+VY +K N QWC +++++ ++++ VR
Sbjct: 1114 RPKGAEEESDASREKFFVPESDHLTLLHVYQQWKINNYSSQWCAEHYIHIKAMRKVREVR 1173
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
QL IM + ++K E ++ I IRK++ + +F
Sbjct: 1174 GQLLDIMVQHDMK---VESCGSNWDI-IRKAITSSYF 1206
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 40/154 (25%), Positives = 76/154 (49%)
Query: 57 IAALCQRYN-IPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTL 115
I + ++YN + ++N A L + +Q+ + K+A + KM GD L
Sbjct: 962 ILSAAEKYNCVDEILNVASMLTHANNIFYVQKG----KEKEAENIKKMFIIEGGGDFLLF 1017
Query: 116 LNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYI 175
LN+Y ++N +CYD+F+ Y +L +V+ QL I ++ ++ ++ + +
Sbjct: 1018 LNIYKQCEENNFSTSFCYDHFLQYHTLIKVKDVKTQLLSICEKIDIPITTCGIENHESIN 1077
Query: 176 NIRKSLVTGFFMQLIIVLAYPISS--LPTVSLDQ 207
NI+KS+V+ FF A P++ L + L+Q
Sbjct: 1078 NIKKSIVSAFFTNA----ALPVNKTELKIIKLNQ 1107
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 40/154 (25%), Positives = 76/154 (49%)
Query: 57 IAALCQRYN-IPHVINNAYGLQSTRLMKLIQEAARPNEAKKAADDAKMRFAHIDGDHLTL 115
I + ++YN + ++N A L + +Q+ + K+A + KM GD L
Sbjct: 962 ILSAAEKYNCVDEILNVASMLTHANNIFYVQKG----KEKEAENIKKMFIIEGGGDFLLF 1017
Query: 116 LNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYI 175
LN+Y ++N +CYD+F+ Y +L +V+ QL I ++ ++ ++ + +
Sbjct: 1018 LNIYKQCEENNFSTSFCYDHFLQYHTLIKVKDVKTQLLSICEKIDIPITTCGIENHESIN 1077
Query: 176 NIRKSLVTGFFMQLIIVLAYPISS--LPTVSLDQ 207
NI+KS+V+ FF A P++ L + L+Q
Sbjct: 1078 NIKKSIVSAFFTNA----ALPVNKTELKIIKLNQ 1107
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 32/107 (29%), Positives = 57/107 (53%)
Query: 84 LIQEAARPNEAKKAAD-DAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSL 142
L+ ++P+E K+ D D+ + GDH+ LL ++ ++ + DP WC +N + R +
Sbjct: 461 LLPARSKPSEKKRKHDEDSNLPNGSGYGDHIQLLQIFESWDRTNYDPVWCKENGMQVRGM 520
Query: 143 KSADNVRQQLSRIM-----DRFNLKRSSTEFTSKDYYINIRKSLVTG 184
+VR+QL +IM DR + + +S+D Y +RK+L G
Sbjct: 521 VFVKDVRRQLCQIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVG 567
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 144 (55.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 33/99 (33%), Positives = 53/99 (53%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP ++ +D + +FA + DHLT LNVY +K N WC D+F++ ++++ VR
Sbjct: 525 RPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVR 584
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
QL IM + +R S D+ I +RK + +F Q
Sbjct: 585 AQLKDIMVQ---QRMSLASCGTDWDI-VRKCICAAYFHQ 619
Score = 38 (18.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 250 TSKDYYINIRKSLVTGFFMQDYYINIRKSLVTGFFMQCLLGIIG 293
T +++ SL + DY + + T +MQC+ + G
Sbjct: 634 TGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDG 677
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 140 (54.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 29/107 (27%), Positives = 53/107 (49%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP + K+ AD K F + GD LL ++ + + QWC D F+ Y+++K N+
Sbjct: 690 RPKDKKELADKRKQEFNDLQGDQFMLLKIWQQWVDSGYSVQWCQDYFIQYKTMKRIKNIY 749
Query: 150 QQLSRIMDRFNLKRSSTEF------TSKDYYINIRKSLVTGFFMQLI 190
+QL R+ + ++ +S + D + K L++GFF ++
Sbjct: 750 EQLIRLSKKIGIEVNSRHQHRDHLQENTDNNTLLTKCLISGFFNNIV 796
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 31/94 (32%), Positives = 52/94 (55%)
Query: 93 EAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQL 152
E ++ + K +F + DHLTLLN+Y ++ + WC NF+ Y++L A V QL
Sbjct: 986 ENNESIESKKEKFTVPESDHLTLLNIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQL 1045
Query: 153 SRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
I+ N+K S + +K + IRK++ +G+F
Sbjct: 1046 IDIIKTLNIKNVSCD--NK--WELIRKTICSGYF 1075
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 31/94 (32%), Positives = 52/94 (55%)
Query: 93 EAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQQL 152
E ++ + K +F + DHLTLLN+Y ++ + WC NF+ Y++L A V QL
Sbjct: 986 ENNESIESKKEKFTVPESDHLTLLNIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQL 1045
Query: 153 SRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
I+ N+K S + +K + IRK++ +G+F
Sbjct: 1046 IDIIKTLNIKNVSCD--NK--WELIRKTICSGYF 1075
>UNIPROTKB|Q05BE5 [details] [associations]
symbol:DHX33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33,
isoform CRA_c" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 EMBL:CH471108 GO:GO:0004386 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC004148 UniGene:Hs.250456
HGNC:HGNC:16718 ChiTaRS:DHX33 EMBL:BC050409 IPI:IPI00789223
SMR:Q05BE5 Ensembl:ENST00000433302 UCSC:uc010clf.3
HOVERGEN:HBG082280 Uniprot:Q05BE5
Length = 483
Score = 136 (52.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 31/97 (31%), Positives = 48/97 (49%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQ 150
P ++ + +F +GDH+TLLN+Y FK + WC +NFVN +++ VR
Sbjct: 314 PPSRREEVQGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRA 373
Query: 151 QLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFM 187
QL I LK S +S+ ++R+ L FM
Sbjct: 374 QLRDIC----LKMSMPIASSRGDVESVRRCLAHSLFM 406
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 138 (53.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 32/96 (33%), Positives = 47/96 (48%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQ 150
P + + +F +GDHLTLLNVY FK + +WC +NFVN +++ VR
Sbjct: 545 PPSRRDEVQSVRKKFVSSEGDHLTLLNVYRTFKNTGGNKEWCKENFVNSKNMMLVAEVRA 604
Query: 151 QLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
QL I +K S +S+ +IR+ L F
Sbjct: 605 QLRDIC----IKMSMPIVSSRGDTESIRRCLAHSLF 636
>RGD|1307239 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10116 "Rattus norvegicus" [GO:0000182 "rDNA binding"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=ISO] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 RGD:1307239 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 IPI:IPI00952339
Ensembl:ENSRNOT00000068255 UCSC:RGD:1307239 Uniprot:D3ZWE8
Length = 475
Score = 135 (52.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 31/97 (31%), Positives = 47/97 (48%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQ 150
P + + +F +GDH+TLLN+Y FK + WC +NFVN +++ VR
Sbjct: 306 PPARRDEVQSVRKKFISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRA 365
Query: 151 QLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFM 187
QL I LK S +S+ ++R+ L FM
Sbjct: 366 QLRDIC----LKMSMPIMSSRGDMESVRRCLAHSLFM 398
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 136 (52.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 31/97 (31%), Positives = 48/97 (49%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQ 150
P ++ + +F +GDH+TLLN+Y FK + WC +NFVN +++ VR
Sbjct: 448 PPSRREEVQGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRA 507
Query: 151 QLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFM 187
QL I LK S +S+ ++R+ L FM
Sbjct: 508 QLRDIC----LKMSMPIASSRGDVESVRRCLAHSLFM 540
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 138 (53.6 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP E ++ +D A+ +F + DHLT L+VY +K N WC +F++ +SL+ A VR
Sbjct: 757 RPKERQEESDAAREKFFVPESDHLTFLHVYSQWKANGHSDAWCSRHFLHSKSLRRAKEVR 816
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
QL IM ++ D+ + +R+ + +G++ Q
Sbjct: 817 DQLLDIM---KTQKMDIVSCGTDWDV-VRRCICSGYYHQ 851
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 136 (52.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 31/97 (31%), Positives = 48/97 (49%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQ 150
P ++ + +F +GDH+TLLN+Y FK + WC +NFVN +++ VR
Sbjct: 538 PPSRREEVQGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRA 597
Query: 151 QLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFM 187
QL I LK S +S+ ++R+ L FM
Sbjct: 598 QLRDIC----LKMSMPIASSRGDVESVRRCLAHSLFM 630
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 144 (55.7 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 33/99 (33%), Positives = 53/99 (53%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP ++ +D + +FA + DHLT LNVY +K N WC D+F++ ++++ VR
Sbjct: 985 RPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVR 1044
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
QL IM + +R S D+ I +RK + +F Q
Sbjct: 1045 AQLKDIMVQ---QRMSLASCGTDWDI-VRKCICAAYFHQ 1079
Score = 38 (18.4 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 250 TSKDYYINIRKSLVTGFFMQDYYINIRKSLVTGFFMQCLLGIIG 293
T +++ SL + DY + + T +MQC+ + G
Sbjct: 1094 TGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDG 1137
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 144 (55.7 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 33/99 (33%), Positives = 53/99 (53%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP ++ +D + +FA + DHLT LNVY +K N WC D+F++ ++++ VR
Sbjct: 986 RPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVR 1045
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
QL IM + +R S D+ I +RK + +F Q
Sbjct: 1046 AQLKDIMVQ---QRMSLASCGTDWDI-VRKCICAAYFHQ 1080
Score = 38 (18.4 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 250 TSKDYYINIRKSLVTGFFMQDYYINIRKSLVTGFFMQCLLGIIG 293
T +++ SL + DY + + T +MQC+ + G
Sbjct: 1095 TGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDG 1138
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 144 (55.7 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 33/99 (33%), Positives = 53/99 (53%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP ++ +D + +FA + DHLT LNVY +K N WC D+F++ ++++ VR
Sbjct: 987 RPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVR 1046
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
QL IM + +R S D+ I +RK + +F Q
Sbjct: 1047 AQLKDIMVQ---QRMSLASCGTDWDI-VRKCICAAYFHQ 1081
Score = 38 (18.4 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 250 TSKDYYINIRKSLVTGFFMQDYYINIRKSLVTGFFMQCLLGIIG 293
T +++ SL + DY + + T +MQC+ + G
Sbjct: 1096 TGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDG 1139
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 135 (52.6 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 30/97 (30%), Positives = 47/97 (48%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVRQ 150
P + + +F +GDH+TLLN+Y FK + WC +NFVN +++ VR
Sbjct: 529 PPARRDEVQSVRKKFISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRA 588
Query: 151 QLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFM 187
QL I LK S +S+ ++R+ + FM
Sbjct: 589 QLREIC----LKMSMPIMSSRGDMESVRRCMAHSLFM 621
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 142 (55.0 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 32/97 (32%), Positives = 52/97 (53%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP ++ AD K +F + DHLT LNVY ++ ++ +WC DN+++ ++LK VR
Sbjct: 896 RPKGREEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVR 955
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
QL IM L S ++ I +RK + + +F
Sbjct: 956 AQLKEIMQDLKLPLISN---GSEWDI-VRKCICSAYF 988
Score = 38 (18.4 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 267 FMQDYYINIRKSLVTGFFMQCLLGI 291
FM DY + + +MQC+ +
Sbjct: 1022 FMPDYVVYHELIMTAKEYMQCVTAV 1046
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 142 (55.0 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 32/97 (32%), Positives = 52/97 (53%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP ++ AD K +F + DHLT LNVY ++ ++ +WC DN+++ ++LK VR
Sbjct: 896 RPKGREEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVR 955
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFF 186
QL IM L S ++ I +RK + + +F
Sbjct: 956 AQLKEIMQDLKLPLISN---GSEWDI-VRKCICSAYF 988
Score = 38 (18.4 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 267 FMQDYYINIRKSLVTGFFMQCLLGI 291
FM DY + + +MQC+ +
Sbjct: 1022 FMPDYVVYHELIMTAKEYMQCVTAV 1046
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 140 (54.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP ++ +D + +FA + DHL+ LNVY +K N WC D+F++ ++++ VR
Sbjct: 985 RPKGREEESDQIREKFAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVR 1044
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
QL IM + +R S D+ I +RK + +F Q
Sbjct: 1045 AQLKDIMVQ---QRMSLASCGTDWDI-VRKCICAAYFHQ 1079
Score = 38 (18.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 250 TSKDYYINIRKSLVTGFFMQDYYINIRKSLVTGFFMQCLLGIIG 293
T +++ SL + DY + + T +MQC+ + G
Sbjct: 1094 TGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDG 1137
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 140 (54.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP ++ +D + +FA + DHL+ LNVY +K N WC D+F++ ++++ VR
Sbjct: 986 RPKGREEESDQIREKFAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVR 1045
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
QL IM + +R S D+ I +RK + +F Q
Sbjct: 1046 AQLKDIMVQ---QRMSLASCGTDWDI-VRKCICAAYFHQ 1080
Score = 38 (18.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 250 TSKDYYINIRKSLVTGFFMQDYYINIRKSLVTGFFMQCLLGIIG 293
T +++ SL + DY + + T +MQC+ + G
Sbjct: 1095 TGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDG 1138
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 139 (54.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 31/99 (31%), Positives = 52/99 (52%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP ++ +D + +FA + DHLT LNVY +K N WC +F++ ++++ VR
Sbjct: 923 RPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAMRKVREVR 982
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
QL IM + +R S D+ + +RK + +F Q
Sbjct: 983 AQLKDIMVQ---QRMSLASCGTDWDV-VRKCICAAYFHQ 1017
Score = 38 (18.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 250 TSKDYYINIRKSLVTGFFMQDYYINIRKSLVTGFFMQCLLGIIG 293
T +++ SL + DY + + T +MQC+ + G
Sbjct: 1032 TGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDG 1075
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 139 (54.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 31/99 (31%), Positives = 52/99 (52%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP ++ +D + +FA + DHLT LNVY +K N WC +F++ ++++ VR
Sbjct: 929 RPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAMRKVREVR 988
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
QL IM + +R S D+ + +RK + +F Q
Sbjct: 989 AQLKDIMVQ---QRMSLASCGTDWDV-VRKCICAAYFHQ 1023
Score = 38 (18.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 250 TSKDYYINIRKSLVTGFFMQDYYINIRKSLVTGFFMQCLLGIIG 293
T +++ SL + DY + + T +MQC+ + G
Sbjct: 1038 TGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDG 1081
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 137 (53.3 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 31/99 (31%), Positives = 52/99 (52%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKSADNVR 149
RP ++ +D + +F+ + DHLT LNVY +K N WC D+F++ ++++ VR
Sbjct: 1017 RPKGREEESDQVREKFSVPESDHLTYLNVYLQWKNNNYSSIWCNDHFIHTKAMRKVREVR 1076
Query: 150 QQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
QL IM + + S D+ + IRK + +F Q
Sbjct: 1077 AQLKDIMVQQKMNLISC---GSDWDV-IRKCICAAYFHQ 1111
Score = 38 (18.4 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 267 FMQDYYINIRKSLVTGFFMQCLLGIIG 293
+ DY I + T +MQC+ + G
Sbjct: 1143 YTPDYIIYHELVMTTKEYMQCVTAVDG 1169
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 127 (49.8 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 38/107 (35%), Positives = 52/107 (48%)
Query: 90 RPNEAKKAADDAKMRFAHIDGDHLTLLNVYHA-------FKQNQED-PQWCYDNFVNYRS 141
RP E AD A+ +F + DHLTLLNV++ FK N WC NF+ +S
Sbjct: 831 RPKERANEADMAREKFIISESDHLTLLNVFNQWNINLNKFKGNYTKINNWCNKNFLQLKS 890
Query: 142 LKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
L A +++ QL IM + L ++ T D IRK L F+ Q
Sbjct: 891 LYRAKDIKHQLMLIMKKNKLAILKSK-TDDD----IRKCLCASFYQQ 932
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 35/112 (31%), Positives = 55/112 (49%)
Query: 91 PNEAKKAADDAKMRFAHIDGDHLTLLNVYH-----------AFKQNQEDP---QWCYDNF 136
P E ++ A +K FA ++GDHLT L+VY A N D +WC +N+
Sbjct: 539 PREKREEARTSKNHFASVEGDHLTYLSVYRESDEFLEKRKAAGSGNNIDKIMKKWCKENY 598
Query: 137 VNYRSLKSADNVRQQLSRIMDRFNLKRSSTEFTSKDYYINIRKSLVTGFFMQ 188
VN RSLK A ++ +Q+ +++ SS D + R+ L FF++
Sbjct: 599 VNSRSLKHARDIYRQIREHVEQIGFNVSSC---GNDM-LAFRRCLAASFFLK 646
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.136 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 294 294 0.00091 115 3 11 22 0.46 33
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 142
No. of states in DFA: 600 (64 KB)
Total size of DFA: 188 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.25u 0.15s 25.40t Elapsed: 00:00:02
Total cpu time: 25.26u 0.15s 25.41t Elapsed: 00:00:02
Start: Thu Aug 15 14:51:12 2013 End: Thu Aug 15 14:51:14 2013
WARNINGS ISSUED: 1