BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy208
(443 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NUQ8|ABCF3_HUMAN ATP-binding cassette sub-family F member 3 OS=Homo sapiens GN=ABCF3
PE=1 SV=2
Length = 709
Score = 556 bits (1432), Expect = e-157, Method: Compositional matrix adjust.
Identities = 260/434 (59%), Positives = 333/434 (76%), Gaps = 27/434 (6%)
Query: 35 MVSGQLRIPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAINNGTADA 94
+ + LR+P+HIS+LHVEQEV GDDTPA+ SVLE D+ R++LL RE+ +T I G A+
Sbjct: 223 LATRSLRVPAHISLLHVEQEVAGDDTPALQSVLESDSVREDLLRRERELTAQIAAGRAEG 282
Query: 95 NMSTELTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRK-------- 146
+ + EL +++A+LE IEADKAPARASVILAGLGFTP+MQ++ T+ FSGGWR
Sbjct: 283 SEAAELAEIYAKLEEIEADKAPARASVILAGLGFTPKMQQQPTREFSGGWRMRLALARAL 342
Query: 147 ------------------MAIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRI 188
AI+WLENYLQ WP+T+LVVSHDR+FL+++ TDI HLHSQR+
Sbjct: 343 FARPDLLLLDEPTNMLDVRAILWLENYLQTWPSTILVVSHDRNFLNAIATDIIHLHSQRL 402
Query: 189 DTYRGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIKQLE 248
D YRG++E F K K E+L NQQRE EAQ+ +R+H+Q FID FRYNANRAS VQSK+K LE
Sbjct: 403 DGYRGDFETFIKSKQERLLNQQREYEAQQQYRQHIQVFIDRFRYNANRASQVQSKLKMLE 462
Query: 249 RLPELKPIEKEVEVVLKFPDT-ELLSPPILQLSEVNFEYVPGKPILTNVCLGATLESRIC 307
+LPELKP++KE EVV+KFPD E SPPILQL EV+F Y P I + + + A LESRIC
Sbjct: 463 KLPELKPVDKESEVVMKFPDGFEKFSPPILQLDEVDFYYDPKHVIFSRLSVSADLESRIC 522
Query: 308 IVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAF 367
+VG+NGAGK+T+LK+++G ++P G R HRNLK GYFSQHHV+QLD+N+ V+LL F
Sbjct: 523 VVGENGAGKSTMLKLLLGDLAPVRGIRHAHRNLKIGYFSQHHVEQLDLNVSAVELLARKF 582
Query: 368 PGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLD 427
PG+P+EEYR QLG +G+SG+LA++ + SLSGGQKSRVAFA+M M PNF +LDEPTNHLD
Sbjct: 583 PGRPEEEYRHQLGRYGISGELAMRPLASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLD 642
Query: 428 IETIEALGKAINKY 441
+ETIEALG+A+N +
Sbjct: 643 METIEALGRALNNF 656
>sp|Q8K268|ABCF3_MOUSE ATP-binding cassette sub-family F member 3 OS=Mus musculus GN=Abcf3
PE=1 SV=1
Length = 709
Score = 553 bits (1424), Expect = e-156, Method: Compositional matrix adjust.
Identities = 261/434 (60%), Positives = 331/434 (76%), Gaps = 27/434 (6%)
Query: 35 MVSGQLRIPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAINNGTADA 94
+ + LR+P+HIS+LHVEQEV GDDTPA+ SVLE DT R++LL +E+ ++ I G A+
Sbjct: 223 LATRSLRVPAHISLLHVEQEVAGDDTPALQSVLESDTVREDLLRQERELSLRIAAGRAEG 282
Query: 95 NMSTELTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRK-------- 146
+ + +L +++ +LE IEADKAPARASVILAGLGFTP+MQ++ T+ FSGGWR
Sbjct: 283 SEAAQLAEIYGKLEEIEADKAPARASVILAGLGFTPKMQQQPTREFSGGWRMRLALARAL 342
Query: 147 ------------------MAIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRI 188
AI+WLENYLQ WP+T+LVVSHDR+FL+++ TDI HLHSQR+
Sbjct: 343 FARPDLLLLDEPTNMLDVRAILWLENYLQTWPSTILVVSHDRNFLNAIATDIIHLHSQRL 402
Query: 189 DTYRGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIKQLE 248
D YRG++E F K K E+L NQQRE EAQ+ +R+H+Q FID FRYNANRAS VQSK+K LE
Sbjct: 403 DGYRGDFETFIKSKQERLLNQQREYEAQQQYRQHIQVFIDRFRYNANRASQVQSKLKMLE 462
Query: 249 RLPELKPIEKEVEVVLKFPDT-ELLSPPILQLSEVNFEYVPGKPILTNVCLGATLESRIC 307
+LPELKP++KE EVVLKFPD E SPPILQL EV+F Y P I + + + A LESRIC
Sbjct: 463 KLPELKPVDKESEVVLKFPDGFEKFSPPILQLDEVDFYYDPKHSIFSRLSVSADLESRIC 522
Query: 308 IVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAF 367
+VG+NGAGK+T+LK++MG +SP G R HRNLK GYFSQHHV+QLD+N+ V+LL F
Sbjct: 523 VVGENGAGKSTMLKLLMGDLSPVRGIRHAHRNLKIGYFSQHHVEQLDLNVSAVELLARKF 582
Query: 368 PGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLD 427
PG P+EEYR QLG +G+SG+LA++ V SLSGGQKSRVAFA+M M PNF +LDEPTNHLD
Sbjct: 583 PGLPEEEYRHQLGRYGISGELAMRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLD 642
Query: 428 IETIEALGKAINKY 441
+ETIEALG+A+N +
Sbjct: 643 METIEALGQALNNF 656
>sp|Q66H39|ABCF3_RAT ATP-binding cassette sub-family F member 3 OS=Rattus norvegicus
GN=Abcf3 PE=2 SV=1
Length = 709
Score = 550 bits (1418), Expect = e-156, Method: Compositional matrix adjust.
Identities = 261/434 (60%), Positives = 330/434 (76%), Gaps = 27/434 (6%)
Query: 35 MVSGQLRIPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAINNGTADA 94
+ + LR+P+HIS+LHVEQEV GDDTPA+ SVLE DT R++LL +E+ ++ I G A+
Sbjct: 223 LATRSLRVPAHISLLHVEQEVAGDDTPALQSVLESDTIREDLLRQERGLSLKIAAGRAEG 282
Query: 95 NMSTELTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRK-------- 146
+ + L +V+ +LE IEADKAPARASVILAGLGFTP+MQ++ T+ FSGGWR
Sbjct: 283 SEAALLAEVYTKLEEIEADKAPARASVILAGLGFTPKMQQQPTREFSGGWRMRLALARAL 342
Query: 147 ------------------MAIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRI 188
AI+WLENYLQ WP+T+LVVSHDR+FL+++ TDI HLHSQR+
Sbjct: 343 FARPDLLLLDEPTNMLDVRAILWLENYLQTWPSTILVVSHDRNFLNAIATDIIHLHSQRL 402
Query: 189 DTYRGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIKQLE 248
D YRG++E F K K E+L NQQRE EAQ+ +R+H+Q FID FRYNANRAS VQSK+K LE
Sbjct: 403 DGYRGDFETFIKSKQERLLNQQREYEAQQQYRQHIQVFIDRFRYNANRASQVQSKLKMLE 462
Query: 249 RLPELKPIEKEVEVVLKFPDT-ELLSPPILQLSEVNFEYVPGKPILTNVCLGATLESRIC 307
+LPELKP++KE EVVLKFPD E SPPILQL EV+F Y P I + + + A LESRIC
Sbjct: 463 KLPELKPVDKESEVVLKFPDGFEKFSPPILQLDEVDFYYDPKHIIFSRLSVSADLESRIC 522
Query: 308 IVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAF 367
+VG+NGAGK+T+LK++MG ++P G R HRNLK GYFSQHHV+QLD+N+ V+LL F
Sbjct: 523 VVGENGAGKSTMLKLLMGDLAPVRGIRHAHRNLKIGYFSQHHVEQLDLNVSAVELLARKF 582
Query: 368 PGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLD 427
PG+P+EEYR QLG +G+SG+LA++ V SLSGGQKSRVAFA+M M PNF +LDEPTNHLD
Sbjct: 583 PGRPEEEYRHQLGRYGISGELAMRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLD 642
Query: 428 IETIEALGKAINKY 441
+ETIEALG A+N +
Sbjct: 643 METIEALGHALNNF 656
>sp|Q5R9Z5|ABCF3_PONAB ATP-binding cassette sub-family F member 3 OS=Pongo abelii GN=ABCF3
PE=2 SV=1
Length = 709
Score = 548 bits (1413), Expect = e-155, Method: Compositional matrix adjust.
Identities = 257/434 (59%), Positives = 330/434 (76%), Gaps = 27/434 (6%)
Query: 35 MVSGQLRIPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAINNGTADA 94
+ + LR+P+HIS+LHVEQEV DDTPA+ SVLE D+ R++LL RE+ ++ I G +
Sbjct: 223 LATRSLRVPAHISLLHVEQEVAEDDTPALQSVLESDSVREDLLRRERELSAHIAAGRVEG 282
Query: 95 NMSTELTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRK-------- 146
+ + EL +++A+LE IEADKAPARASVILAGLGFTP+MQ++ T+ FSGGWR
Sbjct: 283 SEAAELAEIYAKLEEIEADKAPARASVILAGLGFTPKMQQQPTREFSGGWRMRLALARAL 342
Query: 147 ------------------MAIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRI 188
AI+WLENYLQ WP+T+LVVSHDR+FL+++ DI HLHSQR+
Sbjct: 343 FARPDLLLLDEPTNMLDVRAILWLENYLQTWPSTILVVSHDRNFLNAIAADIIHLHSQRL 402
Query: 189 DTYRGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIKQLE 248
D YRG++E F K K E+L NQQRE EAQ+ +R+H+Q FID FRYNANRAS VQSK+K LE
Sbjct: 403 DGYRGDFETFIKSKQERLLNQQREYEAQQQYRQHIQVFIDRFRYNANRASQVQSKLKMLE 462
Query: 249 RLPELKPIEKEVEVVLKFPDT-ELLSPPILQLSEVNFEYVPGKPILTNVCLGATLESRIC 307
+LPELKP++KE EVV+KFPD E SPPILQL EV+F Y P I + + + A LESRIC
Sbjct: 463 KLPELKPVDKESEVVMKFPDGFEKFSPPILQLDEVDFYYDPKHVIFSRLSVSADLESRIC 522
Query: 308 IVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAF 367
+VG+NGAGK+T+LK+++G ++P G R HRNLK GYFSQHHV+QLD+N+ V+LL F
Sbjct: 523 VVGENGAGKSTMLKLLLGDLAPVRGIRHAHRNLKIGYFSQHHVEQLDLNVSAVELLARKF 582
Query: 368 PGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLD 427
PG+P+EEYR QLG +G+SG+LA++ V SLSGGQKSRVAFA+M M PNF +LDEPTNHLD
Sbjct: 583 PGRPEEEYRHQLGRYGISGELAMRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLD 642
Query: 428 IETIEALGKAINKY 441
+ETIEALG+A+N +
Sbjct: 643 METIEALGRALNNF 656
>sp|O59672|YB89_SCHPO Uncharacterized ABC transporter ATP-binding protein C29A3.09c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC29A3.09c PE=3 SV=1
Length = 736
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/451 (47%), Positives = 294/451 (65%), Gaps = 48/451 (10%)
Query: 39 QLRIPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAIN---------- 88
++ IP+HI++LHVEQE+ GDDTPA+ SVL+ D R+ L+ ++ IT ++
Sbjct: 232 EIAIPTHITILHVEQEMTGDDTPALQSVLDADVWRKYLIQDQEKITNRLSTIEKELEELS 291
Query: 89 -NGTADANMSTELTQVFAELE-----------AIEADKAPARASVILAGLGFTPEMQKRA 136
+ TAD +S L + EL+ +++D+A +RA+ ILAGLGFT EMQ A
Sbjct: 292 KDQTADQAISRRLERERDELDLRLLDIQNKLSEMDSDRAESRAATILAGLGFTQEMQSHA 351
Query: 137 TKHFSGGWRKM--------------------------AIIWLENYLQNWPTTLLVVSHDR 170
TK FSGGWR +I +L YLQ + +LVVSHDR
Sbjct: 352 TKTFSGGWRMRLSLARALFCQPDLLLLDEPSNMLDVPSIAFLSEYLQTYKNIVLVVSHDR 411
Query: 171 HFLDSVPTDIFHLHSQRIDTYRGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTF 230
FL+ V TDI H HS+R+D Y+GN+ F + E+ KNQ RE E Q +R+H+Q FID F
Sbjct: 412 SFLNEVATDIIHQHSERLDYYKGNFSQFYATREERCKNQLREYEKQMEYRKHLQSFIDKF 471
Query: 231 RYNANRASSVQSKIKQLERLPELKPIEKEVEVVLKFPDTELLSPPILQLSEVNFEYVPGK 290
RYNA ++S QS+IK+LE+LP L+ + E EV +FP E +SPPILQ+S+VNFEYVPG
Sbjct: 472 RYNAAKSSEAQSRIKKLEKLPILEKPQTEEEVEFEFPPVEKISPPILQMSDVNFEYVPGH 531
Query: 291 PILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHV 350
PIL +V + ++SRI +VG NGAGK+T+LK+++ + PT+G + H L+ YF+QHHV
Sbjct: 532 PILKHVDIDVQMDSRIGVVGPNGAGKSTMLKLLIEQLHPTSGIVSRHPRLRIAYFAQHHV 591
Query: 351 DQLDMNLRCVQLLEAAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMC 410
D LD+NL + L FPGK +EEYRR LG FGVSG LALQ + +LSGGQKSRVAFA +
Sbjct: 592 DTLDLNLNALSFLAKTFPGKGEEEYRRHLGAFGVSGPLALQKMITLSGGQKSRVAFACLG 651
Query: 411 MAAPNFLVLDEPTNHLDIETIEALGKAINKY 441
+ P+ L+LDEPTNHLD+E+++AL +A+ ++
Sbjct: 652 LQNPHILILDEPTNHLDMESMDALTRAVKRF 682
>sp|P43535|GCN20_YEAST Protein GCN20 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GCN20 PE=1 SV=1
Length = 752
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/448 (42%), Positives = 275/448 (61%), Gaps = 45/448 (10%)
Query: 39 QLRIPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAINN--------- 89
+L +P H+S+LHVEQE+ GDDT A+ SVL+ D R+ LL+ E I + +
Sbjct: 249 ELNVPKHVSILHVEQELRGDDTKALQSVLDADVWRKQLLSEEAKINERLKEMDVLRQEFE 308
Query: 90 ---------GTADANMSTELTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHF 140
++ L Q+ +L +E+DKA ARA+ IL GLGF+ E Q++ T F
Sbjct: 309 EDSLEVKKLDNEREDLDNHLIQISDKLVDMESDKAEARAASILYGLGFSTEAQQQPTNSF 368
Query: 141 SGGWRKM--------------------------AIIWLENYLQNWPTTLLVVSHDRHFLD 174
SGGWR +I +L YL+ +P T+L VSHDR FL+
Sbjct: 369 SGGWRMRLSLARALFCQPDLLLLDEPSNMLDVPSIAYLAEYLKTYPNTVLTVSHDRAFLN 428
Query: 175 SVPTDIFHLHSQRIDTYRG-NYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYN 233
V TDI + H++R+D YRG +++ F K E+ KN QRE + Q ++R+H+Q+FID +RYN
Sbjct: 429 EVATDIIYQHNERLDYYRGQDFDTFYTTKEERRKNAQREYDNQMVYRKHLQEFIDKYRYN 488
Query: 234 ANRASSVQSKIKQLERLPELKPIEKEVEVVLKFPDTELLSPPILQLSEVNFEYVPGKPIL 293
A ++ QS+IK+LE+LP L+P E++ + KFP+ + LSPPI+QL +V+F Y +L
Sbjct: 489 AAKSQEAQSRIKKLEKLPVLEPPEQDKTIDFKFPECDKLSPPIIQLQDVSFGYDENNLLL 548
Query: 294 TNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQL 353
+V L ++SRI +VG NG GKTTLLKI+M + P G + + L+ GYF+QHHVD +
Sbjct: 549 KDVNLDVQMDSRIALVGANGCGKTTLLKIMMEQLRPLKGFVSRNPRLRIGYFTQHHVDSM 608
Query: 354 DMNLRCVQLLEAAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAA 413
D+ V + +FPGK EEYRR LG FG++G L LQ + LSGGQKSRVAFA +C+
Sbjct: 609 DLTTSAVDWMSKSFPGKTDEEYRRHLGSFGITGTLGLQKMQLLSGGQKSRVAFAALCLNN 668
Query: 414 PNFLVLDEPTNHLDIETIEALGKAINKY 441
P+ LVLDEP+NHLD ++AL +A+ +
Sbjct: 669 PHILVLDEPSNHLDTTGLDALVEALKNF 696
>sp|Q8H0V6|AB3F_ARATH ABC transporter F family member 3 OS=Arabidopsis thaliana GN=ABCF3
PE=2 SV=1
Length = 715
Score = 357 bits (917), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 189/435 (43%), Positives = 265/435 (60%), Gaps = 43/435 (9%)
Query: 42 IPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNRE--------KTITQAINNGTAD 93
IP++ +LHVEQEVVGD T A+ VL D +R LL E +T +G
Sbjct: 228 IPTNCQILHVEQEVVGDKTTALQCVLNTDIERTKLLEEEIQILAKQRETEEPTAKDGMPT 287
Query: 94 AN------MSTELTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKM 147
+ MS L +++ L+AI+A A ARA+ ILAGL FTPEMQ +AT FSGGWR
Sbjct: 288 KDTVEGDLMSQRLEEIYKRLDAIDAYTAEARAASILAGLSFTPEMQLKATNTFSGGWRMR 347
Query: 148 --------------------------AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIF 181
A++WLE YL WP T +VVSH R FL++V TDI
Sbjct: 348 IALARALFIEPDLLLLDEPTNHLDLHAVLWLETYLTKWPKTFIVVSHAREFLNTVVTDII 407
Query: 182 HLHSQRIDTYRGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQ 241
HL +Q++ TY+GNY+ F++ + E++KNQQ+ E+ R H+Q FID FRYNA RAS VQ
Sbjct: 408 HLQNQKLSTYKGNYDIFERTREEQVKNQQKAFESSERSRSHMQAFIDKFRYNAKRASLVQ 467
Query: 242 SKIKQLERLPELKPIEKEVEVVLKFPD-TELLSPPILQLSEVNFEYVPGKPIL-TNVCLG 299
S+IK L+RL + + + + +FP + PPI+ S+ +F Y PG P+L N+ G
Sbjct: 468 SRIKALDRLAHVDQVINDPDYKFEFPTPDDKPGPPIISFSDASFGY-PGGPLLFRNLNFG 526
Query: 300 ATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRC 359
L+SRI +VG NG GK+T+LK+I G + P++GT ++ FSQHHVD LD++
Sbjct: 527 IDLDSRIAMVGPNGIGKSTILKLISGDLQPSSGTVFRSAKVRVAVFSQHHVDGLDLSSNP 586
Query: 360 VQLLEAAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVL 419
+ + +PG P+++ R LG GV+G+LALQ + +LSGGQKSRVAFA++ P+ L+L
Sbjct: 587 LLYMMRCYPGVPEQKLRSHLGSLGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHLLLL 646
Query: 420 DEPTNHLDIETIEAL 434
DEP+NHLD++ +EAL
Sbjct: 647 DEPSNHLDLDAVEAL 661
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 379 LGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAI 438
L G + ++ L+ + SGG + R+A AR P+ L+LDEPTNHLD+ + L +
Sbjct: 323 LAGLSFTPEMQLKATNTFSGGWRMRIALARALFIEPDLLLLDEPTNHLDLHAVLWLETYL 382
Query: 439 NKY 441
K+
Sbjct: 383 TKW 385
>sp|Q8T6B4|ABCF4_DICDI ABC transporter F family member 4 OS=Dictyostelium discoideum
GN=abcF4 PE=3 SV=1
Length = 1142
Score = 292 bits (748), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 164/437 (37%), Positives = 251/437 (57%), Gaps = 35/437 (8%)
Query: 39 QLRIPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQ--AINNG---TAD 93
++ I H+ VL+VEQEV GDDT +D VL D +R+ LL+ EK +T+ +N
Sbjct: 654 EITIAPHLRVLYVEQEVTGDDTTPLDCVLAADEERKWLLDEEKVLTELEKVNPSWQFDPR 713
Query: 94 ANMSTELTQVFAELEAIEADKAPARASVILAGLGFT-PEMQKRATKHFSGGWRKM----- 147
+ L ++ L+ I+ADKA RA+ IL GLGFT E+ + ++ +SGGWR
Sbjct: 714 QKRNYSLRDIYDRLKEIDADKASIRAANILIGLGFTFEEISVKKSRDYSGGWRMRIALAR 773
Query: 148 ---------------------AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQ 186
A +WLE YL W TLLVVSH+ FL+ V +I ++H Q
Sbjct: 774 ALFCKPEVLLLDEPSNHLDLHACVWLEKYLNQWDRTLLVVSHEASFLNEVVDNIIYIHDQ 833
Query: 187 RIDTYRGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIKQ 246
++D YRGNY+AF K K+ L+++++E + Q + + +FI T N +A S+ K+
Sbjct: 834 KLDQYRGNYDAFMKQKSVNLRSKEKEKDKQDRKLKKMNEFI-TKNKNNTQAKQAASRAKK 892
Query: 247 LERLPELKPIEKEVEVVLKFPDTELLSPPILQLSEVNFEYVPGKP-ILTNVCLGATLESR 305
+E++ ++ ++ +V+ FP E L+PP+L +V F Y G+P + + +G ++S+
Sbjct: 893 MEKIETIELEREDASLVVDFPQPEHLTPPLLVFKDVCFGYE-GRPTMFKKLDIGIDMDSK 951
Query: 306 ICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEA 365
I +VG NG GK+TL+K++ G + T G R ++ FSQH VDQLD + ++ ++
Sbjct: 952 IALVGMNGVGKSTLMKLMNGDLHETTGYIERSRKMRVARFSQHFVDQLDTTMTPIEYFQS 1011
Query: 366 AFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNH 425
F P ++ R LG FG+ L L + +LSGGQKSRV A + A P+ L+LDEPTNH
Sbjct: 1012 KFNNPPVQQIRNHLGRFGICNSLPLHKITTLSGGQKSRVILAELAWAEPHILLLDEPTNH 1071
Query: 426 LDIETIEALGKAINKYT 442
LDI+ IEAL + IN +T
Sbjct: 1072 LDIDAIEALAEGINAFT 1088
>sp|Q9FJH6|AB1F_ARATH ABC transporter F family member 1 OS=Arabidopsis thaliana GN=ABCF1
PE=1 SV=1
Length = 595
Score = 278 bits (712), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 147/433 (33%), Positives = 242/433 (55%), Gaps = 36/433 (8%)
Query: 39 QLRIPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAINNGTADANMST 98
++ IP + + H+ E+ D ++++V+ CD +R L + + Q + G
Sbjct: 118 EIPIPDQMDIYHLSHEIEATDMSSLEAVVSCDEERLRLEKEVEILVQQDDGG------GE 171
Query: 99 ELTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKM----------- 147
L ++ L+A++A+ A RA+ IL GLGF EMQ + TK FSGGWR
Sbjct: 172 RLQSIYERLDAMDAETAEKRAAEILFGLGFDKEMQAKKTKDFSGGWRMRIALARALFIMP 231
Query: 148 ---------------AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYR 192
A +WLE L+N+ L+VVSH + FL+ V T+I H+ S+++ Y
Sbjct: 232 TILLLDEPTNHLDLEACVWLEESLKNFDRILVVVSHSQDFLNGVCTNIIHMQSKQLKYYT 291
Query: 193 GNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYN----ANRASSVQSKIKQLE 248
GN++ + + ++E +NQ ++ ++ H++++I F + A +A S + + ++E
Sbjct: 292 GNFDQYCQTRSELEENQMKQYRWEQEQISHMKEYIARFGHGSAKLARQAQSKEKTLAKME 351
Query: 249 RLPELKPIEKEVEVVLKFPDTELLSPPILQLSEVNFEYVPGKPILTNVCLGATLESRICI 308
R + + ++ +V +F D L PP+LQ EV+F Y P I N+ G L+SR+ +
Sbjct: 352 RGGLTEKVARDSVLVFRFADVGKLPPPVLQFVEVSFGYTPDYLIYKNIDFGVDLDSRVAL 411
Query: 309 VGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFP 368
VG NGAGK+TLLK++ G + PT G H +LK + QH ++LD+ L + + FP
Sbjct: 412 VGPNGAGKSTLLKLMTGELHPTEGMVRRHNHLKIAQYHQHLAEKLDLELPALLYMMREFP 471
Query: 369 GKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDI 428
G +E+ R +G FG++G + + +LS GQ+SRV FA + PN L+LDEPTNHLDI
Sbjct: 472 GTEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVIFAWLAYKQPNMLLLDEPTNHLDI 531
Query: 429 ETIEALGKAINKY 441
ETI++L +A+N++
Sbjct: 532 ETIDSLAEALNEW 544
>sp|Q9M1H3|AB4F_ARATH ABC transporter F family member 4 OS=Arabidopsis thaliana GN=ABCF4
PE=2 SV=1
Length = 723
Score = 278 bits (711), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 171/457 (37%), Positives = 255/457 (55%), Gaps = 55/457 (12%)
Query: 39 QLRIPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAINNGTADANMST 98
++ +P +I VL VEQEVVGD+ A+++V+ + + L E Q ++G N+
Sbjct: 212 KIPVPKNIDVLLVEQEVVGDEKSALNAVVSANEELVKL-REEAEALQKSSSGADGENVDG 270
Query: 99 --------ELTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKM--- 147
+L +++ L+ + +D A A+AS ILAGLGFT +MQ RAT+ FSGGWR
Sbjct: 271 EDDDDTGEKLAELYDRLQILGSDAAEAQASKILAGLGFTKDMQVRATQSFSGGWRMRISL 330
Query: 148 -----------------------AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLH 184
A++WLE YL W TL+VVSHDR FL++V T+I HLH
Sbjct: 331 ARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIHLH 390
Query: 185 SQRIDTYRGNYEAFDKIKTEKLKNQQREIE--------AQRM-HREHVQKFIDTFRYNAN 235
Q + YRGN++ F+ ++ K ++ + A+R +R +K D ++ A
Sbjct: 391 DQNLHFYRGNFDGFESGYEQRRKEMNKKFDVYDKQMKAAKRTGNRGQQEKVKDRAKFTAA 450
Query: 236 R-ASSVQSKIKQLER---LPELKPIEKEVEVVLKFPDTELLSPPILQLSEVNFEYVPGKP 291
+ AS +SK K ++ PE ++ VV FP+ L+PP+LQL EV+F Y P +P
Sbjct: 451 KEASKSKSKGKTVDEEGPAPEAPRKWRDYSVVFHFPEPTELTPPLLQLIEVSFSY-PNRP 509
Query: 292 I--LTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHH 349
L+NV +G + +R+ IVG NGAGK+TLL ++ G + PT G + L+ G +SQH
Sbjct: 510 DFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTEGEMRRSQKLRIGRYSQHF 569
Query: 350 VDQLDMNLRCVQLLEAAFPGK----PQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVA 405
VD L M VQ L P + QE R +LG FG+ L + LSGGQK+RV
Sbjct: 570 VDLLTMGETPVQYLLRLHPDQEGFSKQEAVRAKLGKFGLPSHNHLSPIAKLSGGQKARVV 629
Query: 406 FARMCMAAPNFLVLDEPTNHLDIETIEALGKAINKYT 442
F + M+ P+ L+LDEPTNHLD+++I+AL A++++T
Sbjct: 630 FTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT 666
>sp|Q8NE71|ABCF1_HUMAN ATP-binding cassette sub-family F member 1 OS=Homo sapiens GN=ABCF1
PE=1 SV=2
Length = 845
Score = 264 bits (674), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 179/438 (40%), Positives = 240/438 (54%), Gaps = 39/438 (8%)
Query: 40 LRIPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAINNGTADANMSTE 99
L IP +I VL EQEVV D+TPA+ +VL DTKR LL E+ + + G D +
Sbjct: 354 LSIPPNIDVLLCEQEVVADETPAVQAVLRADTKRLKLLEEERRLQGQLEQG--DDTAAER 411
Query: 100 LTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKM------------ 147
L +V+ EL A A A A+A ILAGLGF PEMQ R T+ FSGGWR
Sbjct: 412 LEKVYEELRATGAAAAEAKARRILAGLGFDPEMQNRPTQKFSGGWRMRVSLARALFMEPT 471
Query: 148 --------------AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRG 193
A+IWL NYLQ W TLL+VSHD+ FLD V TDI HL +QR+ YRG
Sbjct: 472 LLMLDEPTNHLDLNAVIWLNNYLQGWRKTLLIVSHDQGFLDDVCTDIIHLDAQRLHYYRG 531
Query: 194 NYEAFDKIKTEKLKNQQREIE----------AQRMHREHVQKFIDTFRYNANRASSVQSK 243
NY F K+ +K K ++ E A + +K + +++
Sbjct: 532 NYMTFKKMYQQKQKELLKQYEKQEKKLKELKAGGKSTKQAEKQTKEALTRKQQKCRRKNQ 591
Query: 244 IKQLERLPELKPIEKEVEVVLKFPDTELLSPPILQLSEVNFEYVPGKPILTNVCLGATLE 303
++ + PEL KE V FPD LSPP+L L V F Y KP+ N+ G ++
Sbjct: 592 DEESQEAPELLKRPKEYTVRFTFPDPPPLSPPVLGLHGVTFGYQGQKPLFKNLDFGIDMD 651
Query: 304 SRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLL 363
SRICIVG NG GK+TLL ++ G ++PT G + LK G+F+Q + +QL M + L
Sbjct: 652 SRICIVGPNGVGKSTLLLLLTGKLTPTHGEMRKNHRLKIGFFNQQYAEQLRMEETPTEYL 711
Query: 364 EAAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPT 423
+ F P ++ R+ LG FG+ + LSGGQK+RV FA + P+ L+LDEPT
Sbjct: 712 QRGF-NLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPT 770
Query: 424 NHLDIETIEALGKAINKY 441
N+LDIE+I+ALG+AIN+Y
Sbjct: 771 NNLDIESIDALGEAINEY 788
>sp|Q767L0|ABCF1_PIG ATP-binding cassette sub-family F member 1 OS=Sus scrofa GN=ABCF1
PE=2 SV=1
Length = 807
Score = 264 bits (674), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 179/438 (40%), Positives = 240/438 (54%), Gaps = 39/438 (8%)
Query: 40 LRIPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAINNGTADANMSTE 99
L IP +I VL EQEVV D+TPA+ +VL DTKR LL E+ + + G D +
Sbjct: 316 LSIPPNIDVLLCEQEVVADETPAVQAVLRADTKRLKLLEEERRLQGQLEQG--DDTAADR 373
Query: 100 LTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKM------------ 147
L +V+ EL A A A A+A ILAGLGF PEMQ R T+ FSGGWR
Sbjct: 374 LEKVYEELRATGAAAAEAKARRILAGLGFDPEMQNRPTQKFSGGWRMRVSLARALFMEPT 433
Query: 148 --------------AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRG 193
A+IWL NYLQ W TLL+VSHD+ FLD V TDI HL +QR+ YRG
Sbjct: 434 LLMLDEPTNHLDLNAVIWLNNYLQGWRKTLLIVSHDQGFLDDVCTDIIHLDAQRLHYYRG 493
Query: 194 NYEAFDKIKTEKLKNQQREIE----------AQRMHREHVQKFIDTFRYNANRASSVQSK 243
NY F K+ +K K ++ E A + +K + +++
Sbjct: 494 NYMTFKKMYQQKQKELLKQYEKQEKKLKELKAGGKSTKQAEKQTKEALTRKQQKCRRKNQ 553
Query: 244 IKQLERLPELKPIEKEVEVVLKFPDTELLSPPILQLSEVNFEYVPGKPILTNVCLGATLE 303
++ + PEL KE V FPD LSPP+L L V F Y KP+ N+ G ++
Sbjct: 554 DEESQEAPELLKRPKEYTVRFTFPDPPPLSPPVLGLHGVTFGYEGQKPLFKNLDFGIDMD 613
Query: 304 SRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLL 363
SRICIVG NG GK+TLL ++ G ++PT G + LK G+F+Q + +QL M + L
Sbjct: 614 SRICIVGPNGVGKSTLLLLLTGKLTPTRGEMRKNHRLKIGFFNQQYAEQLRMEETPTEYL 673
Query: 364 EAAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPT 423
+ F P ++ R+ LG FG+ + LSGGQK+RV FA + P+ L+LDEPT
Sbjct: 674 QRGF-NLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPT 732
Query: 424 NHLDIETIEALGKAINKY 441
N+LDIE+I+ALG+AIN+Y
Sbjct: 733 NNLDIESIDALGEAINEY 750
>sp|Q7YR37|ABCF1_PANTR ATP-binding cassette sub-family F member 1 OS=Pan troglodytes
GN=ABCF1 PE=3 SV=1
Length = 807
Score = 263 bits (673), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 179/438 (40%), Positives = 240/438 (54%), Gaps = 39/438 (8%)
Query: 40 LRIPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAINNGTADANMSTE 99
L IP +I VL EQEVV D+TPA+ +VL DTKR LL E+ + + G D +
Sbjct: 316 LSIPPNIDVLLCEQEVVADETPAVQAVLRADTKRLKLLEEERRLQGQLEQG--DDTAAER 373
Query: 100 LTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKM------------ 147
L +V+ EL A A A A+A ILAGLGF PEMQ R T+ FSGGWR
Sbjct: 374 LEKVYEELRATGAAAAEAKARRILAGLGFDPEMQNRPTQKFSGGWRMRVSLARALFMEPT 433
Query: 148 --------------AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRG 193
A+IWL NYLQ W TLL+VSHD+ FLD V TDI HL +QR+ YRG
Sbjct: 434 LLMLDEPTNHLDLNAVIWLNNYLQGWRKTLLIVSHDQGFLDDVCTDIIHLDAQRLHYYRG 493
Query: 194 NYEAFDKIKTEKLKNQQREIE----------AQRMHREHVQKFIDTFRYNANRASSVQSK 243
NY F K+ +K K ++ E A + +K + +++
Sbjct: 494 NYMTFKKMYQQKQKELLKQYEKQEKKLKELKAGGKSTKQAEKQTKEALTRKQQKCRRKNQ 553
Query: 244 IKQLERLPELKPIEKEVEVVLKFPDTELLSPPILQLSEVNFEYVPGKPILTNVCLGATLE 303
++ + PEL KE V FPD LSPP+L L V F Y KP+ N+ G ++
Sbjct: 554 DEESQEAPELLKRPKEYTVRFTFPDPPPLSPPVLGLHGVTFGYEGQKPLFKNLDFGIDMD 613
Query: 304 SRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLL 363
SRICIVG NG GK+TLL ++ G ++PT G + LK G+F+Q + +QL M + L
Sbjct: 614 SRICIVGPNGVGKSTLLLLLTGKLTPTHGEMRKNHRLKIGFFNQQYAEQLRMEETPTEYL 673
Query: 364 EAAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPT 423
+ F P ++ R+ LG FG+ + LSGGQK+RV FA + P+ L+LDEPT
Sbjct: 674 QRGF-NLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPT 732
Query: 424 NHLDIETIEALGKAINKY 441
N+LDIE+I+ALG+AIN+Y
Sbjct: 733 NNLDIESIDALGEAINEY 750
Score = 32.7 bits (73), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 19/35 (54%)
Query: 289 GKPILTNVCLGATLESRICIVGDNGAGKTTLLKII 323
GK + N L R +VG NG GKTTLLK I
Sbjct: 277 GKELFVNADLYIVASRRYGLVGPNGKGKTTLLKHI 311
>sp|Q6MG08|ABCF1_RAT ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus
GN=Abcf1 PE=1 SV=1
Length = 839
Score = 263 bits (672), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 181/438 (41%), Positives = 243/438 (55%), Gaps = 39/438 (8%)
Query: 40 LRIPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAINNGTADANMSTE 99
L IP +I VL EQEVV D+TPA+ +VL DTKR LL EK + + G D + +
Sbjct: 348 LSIPPNIDVLLCEQEVVADETPAVQAVLRADTKRLRLLEEEKRLQGQLEQG--DDTAAEK 405
Query: 100 LTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKM------------ 147
L +V+ EL A A A A+A ILAGLGF PEMQ R T+ FSGGWR
Sbjct: 406 LEKVYEELRATGAAAAEAKARRILAGLGFDPEMQNRPTQKFSGGWRMRVSLARALFMEPT 465
Query: 148 --------------AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRG 193
A+IWL NYLQ W TLL+VSHD+ FLD V TDI HL +QR+ YRG
Sbjct: 466 LLMLDEPTNHLDLNAVIWLNNYLQGWRKTLLIVSHDQGFLDDVCTDIIHLDTQRLHYYRG 525
Query: 194 NYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIKQLERL--- 250
NY F K+ +K K ++ E Q + ++ + + + V ++ +Q R
Sbjct: 526 NYMTFKKMYQQKQKELLKQYEKQEKKLKELKAGGKSTKQAEKQTKEVLTRKQQKCRRKNQ 585
Query: 251 -------PELKPIEKEVEVVLKFPDTELLSPPILQLSEVNFEYVPGKPILTNVCLGATLE 303
PEL +E V FPD LSPP+L L V F Y KP+ N+ G ++
Sbjct: 586 DEESQDPPELLKRPREYTVRFTFPDPPPLSPPVLGLHGVTFGYEGQKPLFKNLDFGIDMD 645
Query: 304 SRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLL 363
SRICIVG NG GK+TLL ++ G ++PT G + LK G+F+Q + +QL M + L
Sbjct: 646 SRICIVGPNGVGKSTLLLLLTGKLTPTNGEMRKNHRLKIGFFNQQYAEQLHMEETPTEYL 705
Query: 364 EAAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPT 423
+ F P ++ R+ LG FG+ + LSGGQK+RV FA + P+ L+LDEPT
Sbjct: 706 QRGF-NLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPT 764
Query: 424 NHLDIETIEALGKAINKY 441
N+LDIE+I+ALG+AIN+Y
Sbjct: 765 NNLDIESIDALGEAINEY 782
>sp|Q8SRV5|ABCF3_ENCCU Probable ATP-binding cassette sub-family F member 3 homolog
OS=Encephalitozoon cuniculi (strain GB-M1) GN=ECU05_1190
PE=3 SV=1
Length = 554
Score = 256 bits (654), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 210/360 (58%), Gaps = 35/360 (9%)
Query: 108 EAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKM-------------------- 147
E +E D A A A IL GLGFT +M + + SGGWR
Sbjct: 159 ETVE-DFAGAEAGRILNGLGFTKDMAVKNMRDLSGGWRMRAHLAKAINADPDLLLLDEPT 217
Query: 148 ------AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNYEAFDKI 201
A+ WLE ++ T+++VSHDR+FL++ I HL+ +ID YRGNYE+F K
Sbjct: 218 NYLDINALSWLEGKIKELK-TVIIVSHDRNFLNNTTEMILHLNDLKIDVYRGNYESFVKQ 276
Query: 202 KTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIKQLERLPELKPIEKEVE 261
+ EK + +RE E+Q + REH+Q FID FRYNA RAS VQSKIK L ++P L +++
Sbjct: 277 RKEKTASARREYESQLLVREHMQSFIDRFRYNAKRASLVQSKIKMLAKMPTLVAPKQDPV 336
Query: 262 VVLKFPDTELLSPPILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLK 321
+ F T +++ V F Y GK +L + + +SRI +VG NG GK+T LK
Sbjct: 337 IKFTFSSTP-AQGALIEFVNVVFSYGCGK-VLGGLSMKINSDSRIVVVGANGQGKSTFLK 394
Query: 322 IIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFPGKPQEEYRRQLGG 381
++ G + T G+ +L+ GYF+QHH+D L +N + + ++ QEE RR L
Sbjct: 395 LLAGKLEATEGSIIRAPSLRVGYFAQHHIDHLRVNENVLDFMMKSY---TQEEARRALAS 451
Query: 382 FGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAINKY 441
FG+S D Q +G+LSGGQKSR+ FA + +PN LVLDEPTNHLD+E+I+AL +A+ ++
Sbjct: 452 FGLSVD--NQCIGTLSGGQKSRLGFAIINGLSPNLLVLDEPTNHLDMESIDALAEALGRF 509
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 71/149 (47%), Gaps = 18/149 (12%)
Query: 286 YVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYF 345
+V GK I+ L + +VG NG GKTTLLK I R +FG
Sbjct: 98 FVKGKEIIREAPLTIVRGRKYGLVGRNGIGKTTLLKAI--------------RKRRFGIP 143
Query: 346 SQHHVDQLDMNLRCVQLLEAAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVA 405
+ + +L + +E F G E R L G G + D+A++ + LSGG + R
Sbjct: 144 RGMRIYMIKQDLIVDETVED-FAGA---EAGRILNGLGFTKDMAVKNMRDLSGGWRMRAH 199
Query: 406 FARMCMAAPNFLVLDEPTNHLDIETIEAL 434
A+ A P+ L+LDEPTN+LDI + L
Sbjct: 200 LAKAINADPDLLLLDEPTNYLDINALSWL 228
>sp|Q6P542|ABCF1_MOUSE ATP-binding cassette sub-family F member 1 OS=Mus musculus GN=Abcf1
PE=1 SV=1
Length = 837
Score = 252 bits (644), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 181/438 (41%), Positives = 243/438 (55%), Gaps = 39/438 (8%)
Query: 40 LRIPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAINNGTADANMSTE 99
L IP +I VL EQEVV D+TPA+ +VL DTKR LL E+ + + G D + +
Sbjct: 346 LSIPPNIDVLLCEQEVVADETPAVQAVLRADTKRLRLLEEERRLQGQLEQG--DDTAAEK 403
Query: 100 LTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKM------------ 147
L +V+ EL A A A A+A ILAGLGF PEMQ R T+ FSGGWR
Sbjct: 404 LEKVYEELRATGAAAAEAKARRILAGLGFDPEMQNRPTQKFSGGWRMRVSLARALFMEPT 463
Query: 148 --------------AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRG 193
A+IWL NYLQ W TLL+VSHD+ FLD V TDI HL +QR+ YRG
Sbjct: 464 LLMLDEPTNHLDLNAVIWLNNYLQGWRKTLLIVSHDQGFLDDVCTDIIHLDTQRLHYYRG 523
Query: 194 NYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIKQLERL--- 250
NY F K+ +K K ++ E Q + ++ + + + V ++ +Q R
Sbjct: 524 NYMTFKKMYQQKQKELLKQYEKQEKKLKELKAGGKSTKQAEKQTKEVLTRKQQKCRRKNQ 583
Query: 251 -------PELKPIEKEVEVVLKFPDTELLSPPILQLSEVNFEYVPGKPILTNVCLGATLE 303
PEL KE V FPD LSPP+L L V F Y KP+ N+ G ++
Sbjct: 584 DEESQEPPELLKRPKEYTVRFTFPDPPPLSPPVLGLHGVTFGYEGQKPLFKNLDFGIDMD 643
Query: 304 SRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLL 363
SRICIVG NG GK+TLL ++ G ++PT G + LK G+F+Q + +QL M + L
Sbjct: 644 SRICIVGPNGVGKSTLLLLLTGKLTPTNGEMRKNHRLKIGFFNQQYAEQLHMEETPTEYL 703
Query: 364 EAAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPT 423
+ +F P ++ R+ LG FG+ + LSGGQK+RV FA + P+ L+LDEPT
Sbjct: 704 QRSF-NLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPT 762
Query: 424 NHLDIETIEALGKAINKY 441
N+LDIE+I+ALG+AIN Y
Sbjct: 763 NNLDIESIDALGEAINDY 780
>sp|Q9UG63|ABCF2_HUMAN ATP-binding cassette sub-family F member 2 OS=Homo sapiens GN=ABCF2
PE=1 SV=2
Length = 623
Score = 248 bits (634), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 151/432 (34%), Positives = 237/432 (54%), Gaps = 39/432 (9%)
Query: 42 IPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAINNGTADANMSTELT 101
IP HI + H+ +E+ D + V+E DT+R L + + DA +L
Sbjct: 138 IPEHIDIYHLTREMPPSDKTPLHCVMEVDTERAMLEKEAERLAHE------DAE-CEKLM 190
Query: 102 QVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKM-------------- 147
+++ LE ++ADKA RAS IL GLGFTP MQ++ K FSGGWR
Sbjct: 191 ELYERLEELDADKAEMRASRILHGLGFTPAMQRKKLKDFSGGWRMRVALARALFIRPFML 250
Query: 148 ------------AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNY 195
A +WLE L+ + L++VSH + FL+ V T+I H+H++++ Y GNY
Sbjct: 251 LLDEPTNHLDLDACVWLEEELKTFKRILVLVSHSQDFLNGVCTNIIHMHNKKLKYYTGNY 310
Query: 196 EAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRY-NANRASSVQSKIKQLERLPELK 254
+ + K + E +NQ + ++ H++ +I F + +A A QSK K L+++
Sbjct: 311 DQYVKTRLELEENQMKRFHWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLQKMMASG 370
Query: 255 PIEKEVE---VVLKFPDTELLSPPILQLSEVNFEYVPGKP-ILTNVCLGATLESRICIVG 310
E+ V + FP + PP++ + V+F+Y P I N+ G L++R+ +VG
Sbjct: 371 LTERVVSDKTLSFYFPPCGKIPPPVIMVQNVSFKYTKDGPCIYNNLEFGIDLDTRVALVG 430
Query: 311 DNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFPG- 369
NGAGK+TLLK++ G + PT G H ++K G + QH +QLD++L ++ + +P
Sbjct: 431 PNGAGKSTLLKLLTGELLPTDGMIRKHSHVKIGRYHQHLQEQLDLDLSPLEYMMKCYPEI 490
Query: 370 KPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIE 429
K +EE R+ +G +G++G + + +LS GQK RV A + P+ L LDEPTNHLDIE
Sbjct: 491 KEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIE 550
Query: 430 TIEALGKAINKY 441
TI+AL AIN++
Sbjct: 551 TIDALADAINEF 562
>sp|Q99LE6|ABCF2_MOUSE ATP-binding cassette sub-family F member 2 OS=Mus musculus GN=Abcf2
PE=2 SV=1
Length = 628
Score = 248 bits (632), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 239/432 (55%), Gaps = 39/432 (9%)
Query: 42 IPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAINNGTADANMSTELT 101
IP HI + H+ +E+ + + V+E DT+R +L RE A DA +L
Sbjct: 143 IPEHIDIYHLTREMPPSEKTPLQCVMEVDTERA-MLERE-----AERLAHEDAE-CEKLM 195
Query: 102 QVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKM-------------- 147
+++ LE ++ADKA RAS IL GLGFTP MQ++ K FSGGWR
Sbjct: 196 ELYERLEELDADKAEMRASRILHGLGFTPAMQRKKLKDFSGGWRMRVALARALFIRPFML 255
Query: 148 ------------AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNY 195
A +WLE L+ + L++VSH + FL+ V T+I H+H++++ Y GNY
Sbjct: 256 LLDEPTNHLDLDACVWLEEELKTFKRILVLVSHSQDFLNGVCTNIIHMHNKKLKYYTGNY 315
Query: 196 EAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRY-NANRASSVQSKIKQLERLPELK 254
+ + K + E +NQ + ++ H++ +I F + +A A QSK K L+++
Sbjct: 316 DQYVKTRLELEENQMKRFHWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLQKMMASG 375
Query: 255 PIEKEVE---VVLKFPDTELLSPPILQLSEVNFEYVPGKP-ILTNVCLGATLESRICIVG 310
E+ V + FP + PP++ + V+F+Y P I N+ G L++R+ +VG
Sbjct: 376 LTERVVSDKTLSFYFPPCGKIPPPVIMVQNVSFKYTKDGPCIYNNLEFGIDLDTRVALVG 435
Query: 311 DNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFPG- 369
NGAGK+TLLK++ G + PT G H ++K G + QH +QLD++L ++ + +P
Sbjct: 436 PNGAGKSTLLKLLTGELLPTDGMIRKHSHVKIGRYHQHLQEQLDLDLSPLEYMMKCYPEI 495
Query: 370 KPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIE 429
K +EE R+ +G +G++G + + +LS GQK RV A + P+ L LDEPTNHLDIE
Sbjct: 496 KEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIE 555
Query: 430 TIEALGKAINKY 441
TI+AL AIN++
Sbjct: 556 TIDALADAINEF 567
>sp|Q8T6B7|ABCF2_DICDI ABC transporter F family member 2 OS=Dictyostelium discoideum
GN=abcF2 PE=3 SV=1
Length = 593
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 149/437 (34%), Positives = 225/437 (51%), Gaps = 40/437 (9%)
Query: 39 QLRIPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAINNGTADANMST 98
+L IP HI + H+ +E + A+ SV++ D +++ G S
Sbjct: 102 ELPIPEHIDIFHLSEEAHPSERTALQSVID-DAEKEVKRLEVLEERLLEEQGPE----SE 156
Query: 99 ELTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKM----------- 147
EL V+ LE ++ RAS IL GLGFT + + TK SGGWR
Sbjct: 157 ELFDVYERLENLDPTTFVPRASEILIGLGFTSQTMLKKTKDLSGGWRMRVSLAKALFIKP 216
Query: 148 ---------------AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYR 192
A +WLE+YL N+ +L+++SH + FL++V T+I H+ ++ Y
Sbjct: 217 TLLLLDEPTNHLDLGACVWLEDYLANYDRSLIIISHSQDFLNAVCTNIIHMTQSKLKYYG 276
Query: 193 GNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIKQLERLPE 252
GNY+ F K K E NQ + Q+ H++ FI + +N +SK K ++++ E
Sbjct: 277 GNYDNFVKTKAELEVNQMKAYHKQQEEIAHIKSFIASCGTYSNLVRQGKSKQKIIDKMEE 336
Query: 253 LKPIEKEVE---VVLKFPDTELLSPPILQLSEVNFEYVPGKP---ILTNVCLGATLESRI 306
+E+ E FP L+PPI+ V F Y GK + N+ L L+SRI
Sbjct: 337 AGLVERVQEDKIFNFSFPPCGELAPPIMHFDNVTFSY-SGKEADVLYRNLDLAIDLDSRI 395
Query: 307 CIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAA 366
+VG NGAGK+TLLK+++G ISPT G H +LK + QH + LD+ + + +
Sbjct: 396 ALVGPNGAGKSTLLKLMVGQISPTQGFIKKHSHLKMARYHQHAHEVLDLTATPLDFVRSK 455
Query: 367 FP--GKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTN 424
F K EE+RR++G FGV+G + +G +S G KSR+ F M + P+ L+LDEPTN
Sbjct: 456 FAHMNKDTEEWRREIGRFGVTGKAQTEAIGCMSDGIKSRLIFCLMALENPHLLLLDEPTN 515
Query: 425 HLDIETIEALGKAINKY 441
HLD+E I++L AIN +
Sbjct: 516 HLDMECIDSLALAINSF 532
>sp|P40024|ARB1_YEAST ABC transporter ATP-binding protein ARB1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ARB1 PE=1
SV=1
Length = 610
Score = 241 bits (615), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 140/438 (31%), Positives = 239/438 (54%), Gaps = 48/438 (10%)
Query: 42 IPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNR-----EKTITQAINNGTADANM 96
IP HI + +++ + A+D V+ T+ Q+ L R EKTI + D
Sbjct: 134 IPEHIDIYLLDEPAEPSELSALDYVV---TEAQHELKRIEDLVEKTILE-------DGPE 183
Query: 97 STELTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKM--------- 147
S L ++ +++++ D +RA++IL GLGF + + TK SGGW+
Sbjct: 184 SELLEPLYERMDSLDPDTFESRAAIILIGLGFNKKTILKKTKDMSGGWKMRVALAKALFV 243
Query: 148 -----------------AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDT 190
A +WLE YL+ + TL++VSH + FL+ V T++ + +Q++
Sbjct: 244 KPTLLLLDDPTAHLDLEACVWLEEYLKRFDRTLVLVSHSQDFLNGVCTNMIDMRAQKLTA 303
Query: 191 YRGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIKQLERL 250
Y GNY+++ K ++E NQ ++ Q+ +H++KFI + AN +S+ K L+++
Sbjct: 304 YGGNYDSYHKTRSELETNQMKQYNKQQEEIQHIKKFIASAGTYANLVKQAKSRQKILDKM 363
Query: 251 PE---LKPIEKEVEVVLKFPDTELLSPPILQLSEVNFEYV--PGKPILTNVCLGATLESR 305
++P+ + +FP E L PP+L +++F Y P + + ++ G ++SR
Sbjct: 364 EADGLVQPVVPDKVFSFRFPQVERLPPPVLAFDDISFHYESNPSENLYEHLNFGVDMDSR 423
Query: 306 ICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEA 365
I +VG NG GK+TLLKI+ G ++P +G + H ++K G +SQH DQLD+ ++ +
Sbjct: 424 IALVGPNGVGKSTLLKIMTGELTPQSGRVSRHTHVKLGVYSQHSQDQLDLTKSALEFVRD 483
Query: 366 AFPGKPQE--EYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPT 423
+ Q+ +R QLG +G++G+ + +LS GQ+SRV FA + + PN L+LDEPT
Sbjct: 484 KYSNISQDFQFWRGQLGRYGLTGEGQTVQMATLSEGQRSRVVFALLALEQPNVLLLDEPT 543
Query: 424 NHLDIETIEALGKAINKY 441
N LDI TI++L AIN++
Sbjct: 544 NGLDIPTIDSLADAINEF 561
>sp|Q2KJA2|ABCF2_BOVIN ATP-binding cassette sub-family F member 2 OS=Bos taurus GN=ABCF2
PE=2 SV=1
Length = 625
Score = 238 bits (607), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 151/432 (34%), Positives = 236/432 (54%), Gaps = 39/432 (9%)
Query: 42 IPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAINNGTADANMSTELT 101
IP HI + H+ +E+ D + V+E DT+R +L RE + + + A+ EL
Sbjct: 140 IPEHIDIYHLTREMPPSDKTPLQCVMEVDTERA-MLERE---AERLAHEDAECEKLLELY 195
Query: 102 QVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKM-------------- 147
+ ++ADKA RAS IL GLGFTP MQ++ K FSGGWR
Sbjct: 196 ERLE---ELDADKAEMRASRILHGLGFTPAMQRKKLKDFSGGWRMRVALARALFIRPFML 252
Query: 148 ------------AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNY 195
A +WLE L+ + L++VSH + FL+ V T+I H+H++++ Y GNY
Sbjct: 253 LLDEPTNHLDLDACVWLEEELKTFKRILVLVSHSQDFLNGVCTNIIHMHNKKLKYYTGNY 312
Query: 196 EAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRY-NANRASSVQSKIKQLERLPELK 254
+ + K + E +NQ + ++ H++ +I F + +A A QSK K L+++
Sbjct: 313 DQYVKTRLELEENQMKRFHWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLQKMMASG 372
Query: 255 PIEKEVE---VVLKFPDTELLSPPILQLSEVNFEYVPGKP-ILTNVCLGATLESRICIVG 310
E+ V + FP + PP++ + V+F+Y P I N+ G L++R+ +VG
Sbjct: 373 LTERVVSDKTLSFYFPPCGKIPPPVIMVQNVSFKYTKDGPCIYNNLEFGIDLDTRVALVG 432
Query: 311 DNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFPG- 369
NGAGK+TLLK++ G + PT G H ++K G + QH +QLD++L ++ + +P
Sbjct: 433 PNGAGKSTLLKLLTGELLPTDGMIRKHSHVKIGRYHQHLQEQLDLDLSPLEYMMKCYPEI 492
Query: 370 KPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIE 429
K +EE R+ +G +G++G + + +LS GQK RV A + P+ L LDEPTNHLDIE
Sbjct: 493 KEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIE 552
Query: 430 TIEALGKAINKY 441
TI+AL AIN +
Sbjct: 553 TIDALADAINDF 564
>sp|P63389|YHES_ECOLI Uncharacterized ABC transporter ATP-binding protein YheS
OS=Escherichia coli (strain K12) GN=yheS PE=1 SV=1
Length = 637
Score = 236 bits (601), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 223/430 (51%), Gaps = 35/430 (8%)
Query: 38 GQLRIPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAINNGTADANMS 97
G P + V QE A++ V++ D RE +A + + N
Sbjct: 56 GSYTFPGSWQLAWVNQETPALPQAALEYVIDGD--------REYRQLEAQLHDANERNDG 107
Query: 98 TELTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKM---------- 147
+ + +L+AI+A +RA+ +L GLGF+ E +R FSGGWR
Sbjct: 108 HAIATIHGKLDAIDAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNLAQALICR 167
Query: 148 ----------------AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTY 191
A+IWLE +L+++ TL+++SHDR FLD + I H+ Q + Y
Sbjct: 168 SDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQQSMFEY 227
Query: 192 RGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIKQLERLP 251
GNY +F+ + +L QQ E+Q+ H+Q +ID FR A +A QS+IK LER+
Sbjct: 228 TGNYSSFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIKMLERME 287
Query: 252 ELKPIEKEVEVVLKFPDTELLSPPILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGD 311
+ P + F E L P+L++ +V+ Y + IL ++ L SRI ++G
Sbjct: 288 LIAPAHVDNPFRFSFRAPESLPNPLLKMEKVSAGY-GDRIILDSIKLNLVPGSRIGLLGR 346
Query: 312 NGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFPGKP 371
NGAGK+TL+K++ G ++P +G + + +K GYF+QH ++ L + +Q L P +
Sbjct: 347 NGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEYLRADESPIQHLARLAPQEL 406
Query: 372 QEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETI 431
+++ R LGGFG GD + SGG+K+R+ A + PN L+LDEPTNHLD++
Sbjct: 407 EQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMR 466
Query: 432 EALGKAINKY 441
+AL +A+ ++
Sbjct: 467 QALTEALIEF 476
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 45/195 (23%)
Query: 106 ELEAIEADKAPARASVILA-------------GLGFTPEMQKRATKHFSGG--------- 143
+LE + AD++P + LA G GF + T+ FSGG
Sbjct: 384 QLEYLRADESPIQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLAL 443
Query: 144 --WRKMAIIWLE---NYLQ------------NWPTTLLVVSHDRHFLDSVPTDIFHLHSQ 186
W++ ++ L+ N+L + L+VVSHDRH L S D++ +H +
Sbjct: 444 IVWQRPNLLLLDEPTNHLDLDMRQALTEALIEFEGALVVVSHDRHLLRSTTDDLYLVHDR 503
Query: 187 RIDTYRGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIKQ 246
+++ + G+ E + + ++ K + + EA + + Q D R A + Q K+
Sbjct: 504 KVEPFDGDLEDYQQWLSDVQKQENQTDEAPKENANSAQARKDQKRREAELRAQTQPLRKE 563
Query: 247 LERLPELKPIEKEVE 261
+ RL EKE+E
Sbjct: 564 IARL------EKEME 572
>sp|P63390|YHES_ECO57 Uncharacterized ABC transporter ATP-binding protein YheS
OS=Escherichia coli O157:H7 GN=yheS PE=3 SV=1
Length = 637
Score = 236 bits (601), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 223/430 (51%), Gaps = 35/430 (8%)
Query: 38 GQLRIPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAINNGTADANMS 97
G P + V QE A++ V++ D RE +A + + N
Sbjct: 56 GSYTFPGSWQLAWVNQETPALPQAALEYVIDGD--------REYRQLEAQLHDANERNDG 107
Query: 98 TELTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKM---------- 147
+ + +L+AI+A +RA+ +L GLGF+ E +R FSGGWR
Sbjct: 108 HAIATIHGKLDAIDAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNLAQALICR 167
Query: 148 ----------------AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTY 191
A+IWLE +L+++ TL+++SHDR FLD + I H+ Q + Y
Sbjct: 168 SDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQQSMFEY 227
Query: 192 RGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIKQLERLP 251
GNY +F+ + +L QQ E+Q+ H+Q +ID FR A +A QS+IK LER+
Sbjct: 228 TGNYSSFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIKMLERME 287
Query: 252 ELKPIEKEVEVVLKFPDTELLSPPILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGD 311
+ P + F E L P+L++ +V+ Y + IL ++ L SRI ++G
Sbjct: 288 LIAPAHVDNPFRFSFRAPESLPNPLLKMEKVSAGY-GDRIILDSIKLNLVPGSRIGLLGR 346
Query: 312 NGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFPGKP 371
NGAGK+TL+K++ G ++P +G + + +K GYF+QH ++ L + +Q L P +
Sbjct: 347 NGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEYLRADESPIQHLARLAPQEL 406
Query: 372 QEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETI 431
+++ R LGGFG GD + SGG+K+R+ A + PN L+LDEPTNHLD++
Sbjct: 407 EQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMR 466
Query: 432 EALGKAINKY 441
+AL +A+ ++
Sbjct: 467 QALTEALIEF 476
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 45/195 (23%)
Query: 106 ELEAIEADKAPARASVILA-------------GLGFTPEMQKRATKHFSGG--------- 143
+LE + AD++P + LA G GF + T+ FSGG
Sbjct: 384 QLEYLRADESPIQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLAL 443
Query: 144 --WRKMAIIWLE---NYLQ------------NWPTTLLVVSHDRHFLDSVPTDIFHLHSQ 186
W++ ++ L+ N+L + L+VVSHDRH L S D++ +H +
Sbjct: 444 IVWQRPNLLLLDEPTNHLDLDMRQALTEALIEFEGALVVVSHDRHLLRSTTDDLYLVHDR 503
Query: 187 RIDTYRGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIKQ 246
+++ + G+ E + + ++ K + + EA + + Q D R A + Q K+
Sbjct: 504 KVEPFDGDLEDYQQWLSDVQKQENQTDEAPKENANSAQARKDQKRREAELRAQTQPLRKE 563
Query: 247 LERLPELKPIEKEVE 261
+ RL EKE+E
Sbjct: 564 IARL------EKEME 572
>sp|P44808|Y658_HAEIN Uncharacterized ABC transporter ATP-binding protein HI_0658
OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121
/ KW20 / Rd) GN=HI_0658 PE=1 SV=1
Length = 638
Score = 229 bits (583), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 145/456 (31%), Positives = 236/456 (51%), Gaps = 42/456 (9%)
Query: 15 CFSSEFYCKALTLHLHLEGGMVSGQLRIPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQ 74
C S + L L EGG V+ P++ V V QE D AID V++ D +
Sbjct: 38 CGKSSLFA-LLKKELMPEGGEVN----YPANWRVSWVNQETPALDISAIDYVIQGDREYC 92
Query: 75 NLLNREKTITQAINNGTADANMSTELTQVFAELEAIEADKAPARASVILAGLGFTPEMQK 134
L + + + N+G A + ++ +LE ++A +RA+ +L GLGF+ E
Sbjct: 93 RLQQKLERANER-NDGNA-------IARIHGQLETLDAWTIQSRAASLLHGLGFSQEETI 144
Query: 135 RATKHFSGGWRKM--------------------------AIIWLENYLQNWPTTLLVVSH 168
+ K FSGGWR A+IWLE +L + TL+++SH
Sbjct: 145 QPVKAFSGGWRMRLNLAQALLCPSDLLLLDEPTNHLDLDAVIWLERWLVQYQGTLVLISH 204
Query: 169 DRHFLDSVPTDIFHLHSQRIDTYRGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFID 228
DR FLD + T I H+ +Q+++ Y G+Y +F+ + KL Q Q+ H+QK+ID
Sbjct: 205 DRDFLDPIVTKILHIENQKLNEYTGDYSSFEVQRATKLAQQTAMYRQQQQKISHLQKYID 264
Query: 229 TFRYNANRASSVQSKIKQLERLPELKPIEKEVEVVLKFPDTELLSPPILQLSEVNFEYVP 288
F+ A +A QS++K LER+ + P + +F + L P++ + + + Y
Sbjct: 265 RFKAKATKAKQAQSRMKALERMELIAPAYVDNPFTFEFRPPQSLPNPLVMIEQASAGYGI 324
Query: 289 GKP---ILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYF 345
G+ IL+ + L SRI ++G NGAGK+TL+K++ G ++ +GT + + ++ GYF
Sbjct: 325 GESAVEILSKIKLNLVPGSRIGLLGKNGAGKSTLIKLLAGELTALSGTVQLAKGVQLGYF 384
Query: 346 SQHHVDQLDMNLRCVQLLEAAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVA 405
+QH +D L + + ++ P + +++ R LG F GD Q V S SGG+K+R+
Sbjct: 385 AQHQLDTLRADESALWHMQKLAPEQTEQQVRDYLGSFAFHGDKVNQAVKSFSGGEKARLV 444
Query: 406 FARMCMAAPNFLVLDEPTNHLDIETIEALGKAINKY 441
A + PN L+LDEPTNHLD++ +AL +A+ Y
Sbjct: 445 LALIVWQRPNLLLLDEPTNHLDLDMRQALTEALVDY 480
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 41/184 (22%)
Query: 123 LAGLGFTPEMQKRATKHFSGG-----------WRKMAIIWLE---NYLQ----------- 157
L F + +A K FSGG W++ ++ L+ N+L
Sbjct: 418 LGSFAFHGDKVNQAVKSFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEAL 477
Query: 158 -NWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNYEAFDKIKTEKLKNQQREIEAQ 216
++ +L+VVSHDRH L + + + +H ++++ ++G+ E + K +E+ + ++ +
Sbjct: 478 VDYEGSLVVVSHDRHLLRNTVEEFYLVHDKKVEEFKGDLEDYQKWLSEQNSTSENKVSEK 537
Query: 217 RMHREH-VQKFIDTFRYNA---NRASSVQSKIKQLERL-----PELKPIEKEVEVVLKFP 267
E+ VQ + R A + + ++ KI QLE EL IE ++
Sbjct: 538 VGDNENSVQNRKEQKRREAELRQQTAPLRKKITQLEEKMNKFSSELANIENQL------A 591
Query: 268 DTEL 271
DTEL
Sbjct: 592 DTEL 595
>sp|O42943|YBP8_SCHPO Uncharacterized ABC transporter ATP-binding protein C16H5.08c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16H5.08c PE=1 SV=1
Length = 618
Score = 223 bits (568), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/436 (32%), Positives = 221/436 (50%), Gaps = 41/436 (9%)
Query: 43 PSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAINNGTADANMSTELTQ 102
P HI + E D A+D +++ + L E I + TAD L
Sbjct: 129 PEHIDSYLLNAEAEPSDVNAVDYIIQSAKDKVQKLEAE--IEEL---STADDVDDVLLES 183
Query: 103 VFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKM--------------- 147
+ EL+ ++ A+A++IL GLGFT EM + TK SGGWR
Sbjct: 184 KYEELDDMDPSTFEAKAAMILHGLGFTQEMMAKPTKDMSGGWRMRVALSRALFIKPSLLL 243
Query: 148 -----------AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQR-IDTYRGNY 195
A++WLENYL + L+V SH + FL++V T+I L S++ + Y GN+
Sbjct: 244 LDEPTNHLDLEAVVWLENYLAKYDKILVVTSHSQDFLNNVCTNIIDLTSKKQLVYYGGNF 303
Query: 196 EAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIKQLERLPELKP 255
+ + + K E NQ + Q+ H++KFI + AN +SK K ++++
Sbjct: 304 DIYMRTKEENETNQMKAYLKQQEEIAHIKKFIASAGTYANLVRQAKSKQKIIDKMEAAGL 363
Query: 256 IEKEV---EVVLKFPDTELLSPPILQLSEVNFEYVPG--KPILTNVCLGATLESRICIVG 310
+EK + +F + L PPI+ ++V F Y + ++ G ++SR+ IVG
Sbjct: 364 VEKPEPPRQFSFEFDEVRKLPPPIIAFNDVAFSYDGNLDHALYRDLSFGIDMDSRVAIVG 423
Query: 311 DNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLL----EAA 366
NG GK+TLL +I G++ P G + + LK +SQH DQL + ++ + +
Sbjct: 424 KNGTGKSTLLNLITGLLIPIEGNVSRYSGLKMAKYSQHSADQLPYDKSPLEYIMDTYKPK 483
Query: 367 FPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHL 426
FP + +++R LG FG+SG + +LS G KSRV FA + + P+ L+LDEPTNHL
Sbjct: 484 FPERELQQWRSVLGKFGLSGLHQTSEIRTLSDGLKSRVVFAALALEQPHILLLDEPTNHL 543
Query: 427 DIETIEALGKAINKYT 442
DI +I+AL KAIN +T
Sbjct: 544 DITSIDALAKAINVWT 559
>sp|Q9USH9|YJQ1_SCHPO Uncharacterized ABC transporter ATP-binding protein C825.01
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC825.01 PE=1 SV=1
Length = 822
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/451 (31%), Positives = 227/451 (50%), Gaps = 55/451 (12%)
Query: 34 GMVSGQLRIPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAINNGTAD 93
+ G + PS + +++E + ++ +++VL+ + + + L E + +++ +
Sbjct: 320 AIACGLIPTPSSLDFYLLDREYIPNELTCVEAVLDINEQERKHL--EAMMEDLLDDPDKN 377
Query: 94 ANMSTELTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKM------ 147
A EL + L +E + + R IL GL FT EM + T SGGWR
Sbjct: 378 A---VELDTIQTRLTDLETENSDHRVYKILRGLQFTDEMIAKRTNELSGGWRMRIALARI 434
Query: 148 --------------------AIIWLENYLQNWPT--TLLVVSHDRHFLDSVPTDIFHLHS 185
A+ WLE YL + TLL+ H + L+ V TDI HL+
Sbjct: 435 LFIKPTLMMLDEPTNHLDLEAVAWLEEYLTHEMEGHTLLITCHTQDTLNEVCTDIIHLYH 494
Query: 186 QRIDTYRGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIK 245
Q++D Y GNY+ F K++ E R+++ + R+ +K + + N S Q K
Sbjct: 495 QKLDYYSGNYDTFLKVRAE------RDVQLAKKARQQ-EKDMAKLQNKLNMTGSEQQKKA 547
Query: 246 QLERLPELKPIEK--------------EVEVVLKFPDTELLSP-PILQLSEVNFEYVPGK 290
+ + K +EK E ++V++F D P P ++ +V+F Y G
Sbjct: 548 KAKVKAMNKKLEKDKQSGKVLDEEIIQEKQLVIRFEDCGGGIPSPAIKFQDVSFNYPGGP 607
Query: 291 PILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHV 350
I + + G L+SR+ +VG NGAGKTTL+K+I+ + P+ G+ H L+ F+QH
Sbjct: 608 TIFSKLNFGLDLKSRVALVGPNGAGKTTLIKLILEKVQPSTGSVVRHHGLRLALFNQHMG 667
Query: 351 DQLDMNLRCVQLLEAAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMC 410
DQLDM L V+ L F KP+ E RR +G +G++G + +G LS GQ+ RV FA +
Sbjct: 668 DQLDMRLSAVEWLRTKFGNKPEGEMRRIVGRYGLTGKSQVIPMGQLSDGQRRRVLFAFLG 727
Query: 411 MAAPNFLVLDEPTNHLDIETIEALGKAINKY 441
M P+ L+LDEPTN LDI+TI+AL A+N +
Sbjct: 728 MTQPHILLLDEPTNALDIDTIDALADALNNF 758
>sp|O05519|YDIF_BACSU Uncharacterized ABC transporter ATP-binding protein YdiF
OS=Bacillus subtilis (strain 168) GN=ydiF PE=3 SV=2
Length = 642
Score = 189 bits (479), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 159/294 (54%), Gaps = 2/294 (0%)
Query: 149 IIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNYEAFDKIKTEKLKN 208
+ WLE+YLQ + +L+VSHDR+FLD V ++ + Y GNY A+ K + +
Sbjct: 198 LTWLEHYLQGYSGAILIVSHDRYFLDKVVNQVYEVSRAESKKYHGNYSAYLDQKAAQYEK 257
Query: 209 QQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIKQLERLPEL-KPIEKEVEVVLKFP 267
+ E Q+ +Q F+D A+ QS+ KQLER+ + KP+ E F
Sbjct: 258 DLKMYEKQQDEIAKLQDFVDRNLARASTTKRAQSRRKQLERMDVMSKPLGDEKSANFHFD 317
Query: 268 DTELLSPPILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGII 327
T+ +L++ ++ Y P+LT V T +VG NG GK+TLLK ++ +
Sbjct: 318 ITKQSGNEVLRVQDLTISYENQPPLLTEVSFMLTRGESAALVGPNGIGKSTLLKTLIDTL 377
Query: 328 SPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFPGKPQEEYRRQLGGFGVSGD 387
P GT + N+ GY+ Q +L + R + L +PG P++E R LG F SGD
Sbjct: 378 KPDQGTISYGSNVSVGYYDQEQA-ELTSSKRVLDELWDEYPGLPEKEIRTCLGNFLFSGD 436
Query: 388 LALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAINKY 441
L+ V SLSGG+K+R+A A++ + NFL+LDEPTNHLD+++ E L A+ Y
Sbjct: 437 DVLKPVHSLSGGEKARLALAKLMLQKANFLILDEPTNHLDLDSKEVLENALIDY 490
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 44/209 (21%)
Query: 276 ILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRT 335
ILQ+++++ + IL N+ L RI IVG NGAGK+TLLKII G +S G
Sbjct: 3 ILQVNQLSKSF-GADTILNNIKLEVRNRDRIAIVGRNGAGKSTLLKIIAGQLSYEKGEII 61
Query: 336 VHRNLKFGYFSQH------------------HVDQLDMNLRCVQ-LLEAAFPG------- 369
+++ GY +QH H+ ++ +R ++ + AA PG
Sbjct: 62 KPKDITMGYLAQHTGLDSKLTIKEELLTVFDHLKAMEKEMRAMEEKMAAADPGELESIMK 121
Query: 370 ---KPQEEYRRQLGGFGVSGDL-----ALQF--------VGSLSGGQKSRVAFARMCMAA 413
+ Q+E++ + GG+ D+ L F V SLSGGQK+R+A ++ +
Sbjct: 122 TYDRLQQEFKDK-GGYQYEADVRSVLHGLGFSHFDDSTQVQSLSGGQKTRLALGKLLLTQ 180
Query: 414 PNFLVLDEPTNHLDIETIEALGKAINKYT 442
P+ L+LDEPTNHLDI+T+ L + Y+
Sbjct: 181 PDLLILDEPTNHLDIDTLTWLEHYLQGYS 209
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Query: 152 LENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNYEAFDKIKTEKLK---- 207
LEN L ++P TLL VSHDR+F++ + T + L S I+ Y G+Y+ + + KTE+L+
Sbjct: 483 LENALIDYPGTLLFVSHDRYFINRIATRVLELSSSHIEEYLGDYDYYTEKKTEQLELEKM 542
Query: 208 NQQREIE 214
NQQ E +
Sbjct: 543 NQQEETD 549
>sp|Q9LV93|AB5F_ARATH ABC transporter F family member 5 OS=Arabidopsis thaliana GN=ABCF5
PE=2 SV=1
Length = 692
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 187/395 (47%), Gaps = 40/395 (10%)
Query: 83 ITQAINNGTADANMSTELTQVFAELE----AIEADKAPARASVILAGLGFTPEMQKRATK 138
+ +AI D ++ L F L+ A+ D A+ S ++ LGF PE R
Sbjct: 199 VQKAIEGSVDDLDLMGRLLDEFDLLQRRAQAVNLDSVDAKISKLMPELGFAPEDADRLVA 258
Query: 139 HFSGGWR-KMA-------------------------IIWLENYLQNWPTTLLVVSHDRHF 172
FSGGW+ +M+ I WLE YLQ ++++SHDR F
Sbjct: 259 SFSGGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLQKQDVPMVIISHDRAF 318
Query: 173 LDSVPTDIFHLHSQRIDTYRGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRY 232
LD + T I T+ GNY + K E ++ Q E Q+ + + I
Sbjct: 319 LDQLCTKIVETEMGVSRTFEGNYSQYVISKAEWIETQNAAWEKQQKDIDSTKDLIARLGA 378
Query: 233 NAN--RASSVQSKIKQLERLPELKPIEK---EVEVVLKFPDTELLSPPILQLSEVNFEYV 287
AN RAS+ + K+LE+L E + IEK ++ ++FP+ ++ + ++F +
Sbjct: 379 GANSGRASTAE---KKLEKLQEQELIEKPFQRKQMKIRFPERGTSGRSVVNVKNIDFGF- 434
Query: 288 PGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTV-HRNLKFGYFS 346
K + L +I I+G NG GK+TLLK+IMG+ P G + N+ YF
Sbjct: 435 EDKMLFKKANLSIERGEKIAILGPNGCGKSTLLKLIMGLEKPVKGEVILGEHNVLPNYFE 494
Query: 347 QHHVDQLDMNLRCVQLLEAAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAF 406
Q+ + LD++ ++ + A ++ + LG D+ + V LSGG+K+R+AF
Sbjct: 495 QNQAEVLDLDKTVLETVCEAAEDWRSDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAF 554
Query: 407 ARMCMAAPNFLVLDEPTNHLDIETIEALGKAINKY 441
+ + LVLDEPTNHLDI + E L +AIN+Y
Sbjct: 555 CKFMVTPSTLLVLDEPTNHLDIPSKEMLEEAINEY 589
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 44/190 (23%)
Query: 289 GKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHR-NLKFGYFSQ 347
G +L +V ++ +VG NGAGKTT L+II G P +G + N+K + SQ
Sbjct: 109 GVTVLKDVTWEVKRGEKVGLVGVNGAGKTTQLRIITGQEEPDSGNVIKAKPNMKVAFLSQ 168
Query: 348 H------------------------------------HVDQLDMNLRCV-------QLLE 364
VD LD+ R + + +
Sbjct: 169 EFEVSMSKTVREEFMTAFKEEMEITEKLEKVQKAIEGSVDDLDLMGRLLDEFDLLQRRAQ 228
Query: 365 AAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTN 424
A + + + G + + A + V S SGG + R++ ++ + P+ L+LDEPTN
Sbjct: 229 AVNLDSVDAKISKLMPELGFAPEDADRLVASFSGGWQMRMSLGKILLQDPDLLLLDEPTN 288
Query: 425 HLDIETIEAL 434
HLD++TIE L
Sbjct: 289 HLDLDTIEWL 298
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 152 LENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNYEAF 198
LE + + T++ VSHDR+F+ + + + ++ Y G+Y +
Sbjct: 582 LEEAINEYQGTVIAVSHDRYFIKQIVNRVIEVEDGCLEDYAGDYNYY 628
>sp|Q9FIB4|AB2F_ARATH ABC transporter F family member 2 OS=Arabidopsis thaliana GN=ABCF2
PE=3 SV=2
Length = 678
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 192/401 (47%), Gaps = 38/401 (9%)
Query: 74 QNLLNREKTITQAINNGTADANMSTELTQVFAELEAIEADKAPARASVILAGLGFTPEMQ 133
+ L N +K I +A+++ + E + + ++ D A+ S +++ LGF E
Sbjct: 180 RKLENLQKAIEEAVDDLELMGKLLDEFDLLQRRAQEVDLDSIHAKISKLMSELGFVSEDA 239
Query: 134 KRATKHFSGGWR-KMA-------------------------IIWLENYLQNWPTTLLVVS 167
R FS GW+ +M+ I WLE YL ++++S
Sbjct: 240 DRLVASFSSGWQMRMSLGKILLQNPDLLLLDEPTNHLDLDTIEWLEGYLIKQDVPMVIIS 299
Query: 168 HDRHFLDSVPTDIFHLHSQRIDTYRGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFI 227
HDR FLD + T I T+ GNY + K E ++ Q E Q+ E + I
Sbjct: 300 HDRAFLDQLCTKIVETEMGVSRTFDGNYSQYVISKAELVEAQYAAWEKQQKEIEATKDLI 359
Query: 228 DTFRYNAN--RASSVQSKIKQLERLPELKPIEK---EVEVVLKFPDTELLSPPILQLSEV 282
AN RASS + K+LE+L E + IEK ++ ++FP+ L ++ + +
Sbjct: 360 SRLSAGANSGRASSAE---KKLEKLQEEELIEKPFQRKQMKIRFPECGLSGRSVVTVKNL 416
Query: 283 NFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTV-HRNLK 341
F + K + L ++ I+G NG GK+TLLK+IMG+ P G + N+
Sbjct: 417 VFGF-DDKMLFNKANLAIERGEKVAIIGPNGCGKSTLLKLIMGLEKPMRGEVILGEHNVL 475
Query: 342 FGYFSQHHVDQLDMNLRCVQ-LLEAAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQ 400
YF Q+ + D++ ++ ++EAA + ++ + LG D+ + V LSGG+
Sbjct: 476 PNYFEQNQAEAQDLDKTVIETVVEAAVDWRI-DDIKALLGRCNFKADMLDRKVSLLSGGE 534
Query: 401 KSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAINKY 441
K+R+AF + + LVLDEPTNHLDI + E L +AIN+Y
Sbjct: 535 KARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAINEY 575
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 44/190 (23%)
Query: 289 GKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHR-NLKFGYFSQ 347
G +L +V ++ ++G NGAGKTT L+II G P +G + NLK + SQ
Sbjct: 95 GITVLKDVTWEVKKGEKVGLIGVNGAGKTTQLRIITGQEEPDSGNVIWAKPNLKVAFLSQ 154
Query: 348 HHVDQLDMNL---------------RCVQLLEAAFP---------GKPQEEY----RRQ- 378
+ + R ++ L+ A GK +E+ RR
Sbjct: 155 EFEVSMGKTVKEEFMCTFKEEMEIARKLENLQKAIEEAVDDLELMGKLLDEFDLLQRRAQ 214
Query: 379 --------------LGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTN 424
+ G + A + V S S G + R++ ++ + P+ L+LDEPTN
Sbjct: 215 EVDLDSIHAKISKLMSELGFVSEDADRLVASFSSGWQMRMSLGKILLQNPDLLLLDEPTN 274
Query: 425 HLDIETIEAL 434
HLD++TIE L
Sbjct: 275 HLDLDTIEWL 284
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 152 LENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNYEAF 198
LE + + T++ VSHDR+F+ + + + + Y G+Y F
Sbjct: 568 LEEAINEYKGTVITVSHDRYFIKQIVNRVIEVRDGGLMDYAGDYNYF 614
>sp|P0A9U3|YBIT_ECOLI Uncharacterized ABC transporter ATP-binding protein YbiT
OS=Escherichia coli (strain K12) GN=ybiT PE=3 SV=1
Length = 530
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 181/379 (47%), Gaps = 35/379 (9%)
Query: 96 MSTELTQVFAELEA----IEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKMAII- 150
MS E A+LE ++ A ARA +L G+G E + GW+ ++
Sbjct: 108 MSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLA 167
Query: 151 -------------------------WLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHS 185
WLE L +T++++SHDRHFL+ V T + L
Sbjct: 168 QALFADPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDY 227
Query: 186 QRIDTYRGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIK 245
+ Y GNY+ + T+ + + ++ +Q F+ F NA+++ S+ +
Sbjct: 228 GELRVYPGNYDEYMTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRAR 287
Query: 246 QLER--LPELKPIEKEVEVVLKFPDTELLSPPILQLSEVNFEYVPGKPILTNVCLGATLE 303
Q+++ L E+K ++ ++F + L L++ + + G P+ N+ L +
Sbjct: 288 QIDKIKLEEVKASSRQ-NPFIRFEQDKKLFRNALEVEGLTKGFDNG-PLFKNLNLLLEVG 345
Query: 304 SRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLL 363
++ ++G NG GK+TLLK ++G + P +GT N + GY++Q H + + +L + +
Sbjct: 346 EKLAVLGTNGVGKSTLLKTLVGDLQPDSGTVKWSENARIGYYAQDHEYEFENDLTVFEWM 405
Query: 364 -EAAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEP 422
+ G ++ R LG S D + LSGG+K R+ F ++ M PN L++DEP
Sbjct: 406 SQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEP 465
Query: 423 TNHLDIETIEALGKAINKY 441
TNHLD+E+IE+L A+ Y
Sbjct: 466 TNHLDMESIESLNMALELY 484
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 40/189 (21%)
Query: 290 KPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHH 349
KP+ N+ + +R ++G NG+GK+T +KI+ G + PT G ++ N + G Q
Sbjct: 14 KPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQ 73
Query: 350 --------VDQLDMNLRCVQLLEA--------AFPGKPQEEYRR---------QLGGFGV 384
+D + M + +L E A P +E+ + ++ G+
Sbjct: 74 FAFEEFTVLDTVIMGHK--ELWEVKQERDRIYALPEMSEEDGYKVADLEVKYGEMDGYSA 131
Query: 385 ---SGDLAL-------QFVGSLSG---GQKSRVAFARMCMAAPNFLVLDEPTNHLDIETI 431
+G+L L Q G +S G K RV A+ A P+ L+LDEPTN+LDI+TI
Sbjct: 132 EARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFADPDILLLDEPTNNLDIDTI 191
Query: 432 EALGKAINK 440
L + +N+
Sbjct: 192 RWLEQVLNE 200
Score = 40.4 bits (93), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 156 LQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNYEAF 198
L+ + TL+ VSHDR F+ S+ T I + +R+ + GNYE +
Sbjct: 481 LELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSGNYEDY 523
>sp|P0A9U4|YBIT_ECOL6 Uncharacterized ABC transporter ATP-binding protein YbiT
OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 /
UPEC) GN=ybiT PE=3 SV=1
Length = 530
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 181/379 (47%), Gaps = 35/379 (9%)
Query: 96 MSTELTQVFAELEA----IEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKMAII- 150
MS E A+LE ++ A ARA +L G+G E + GW+ ++
Sbjct: 108 MSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLA 167
Query: 151 -------------------------WLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHS 185
WLE L +T++++SHDRHFL+ V T + L
Sbjct: 168 QALFADPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDY 227
Query: 186 QRIDTYRGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIK 245
+ Y GNY+ + T+ + + ++ +Q F+ F NA+++ S+ +
Sbjct: 228 GELRVYPGNYDEYMTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRAR 287
Query: 246 QLER--LPELKPIEKEVEVVLKFPDTELLSPPILQLSEVNFEYVPGKPILTNVCLGATLE 303
Q+++ L E+K ++ ++F + L L++ + + G P+ N+ L +
Sbjct: 288 QIDKIKLEEVKASSRQ-NPFIRFEQDKKLFRNALEVEGLTKGFDNG-PLFKNLNLLLEVG 345
Query: 304 SRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLL 363
++ ++G NG GK+TLLK ++G + P +GT N + GY++Q H + + +L + +
Sbjct: 346 EKLAVLGTNGVGKSTLLKTLVGDLQPDSGTVKWSENARIGYYAQDHEYEFENDLTVFEWM 405
Query: 364 -EAAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEP 422
+ G ++ R LG S D + LSGG+K R+ F ++ M PN L++DEP
Sbjct: 406 SQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEP 465
Query: 423 TNHLDIETIEALGKAINKY 441
TNHLD+E+IE+L A+ Y
Sbjct: 466 TNHLDMESIESLNMALELY 484
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 40/189 (21%)
Query: 290 KPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHH 349
KP+ N+ + +R ++G NG+GK+T +KI+ G + PT G ++ N + G Q
Sbjct: 14 KPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQ 73
Query: 350 --------VDQLDMNLRCVQLLEA--------AFPGKPQEEYRR---------QLGGFGV 384
+D + M + +L E A P +E+ + ++ G+
Sbjct: 74 FAFEEFTVLDTVIMGHK--ELWEVKQERDRIYALPEMSEEDGYKVADLEVKYGEMDGYSA 131
Query: 385 ---SGDLAL-------QFVGSLSG---GQKSRVAFARMCMAAPNFLVLDEPTNHLDIETI 431
+G+L L Q G +S G K RV A+ A P+ L+LDEPTN+LDI+TI
Sbjct: 132 EARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFADPDILLLDEPTNNLDIDTI 191
Query: 432 EALGKAINK 440
L + +N+
Sbjct: 192 RWLEQVLNE 200
Score = 40.4 bits (93), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 156 LQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNYEAF 198
L+ + TL+ VSHDR F+ S+ T I + +R+ + GNYE +
Sbjct: 481 LELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSGNYEDY 523
>sp|P0A9U5|YBIT_ECO57 Uncharacterized ABC transporter ATP-binding protein YbiT
OS=Escherichia coli O157:H7 GN=ybiT PE=3 SV=1
Length = 530
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 181/379 (47%), Gaps = 35/379 (9%)
Query: 96 MSTELTQVFAELEA----IEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKMAII- 150
MS E A+LE ++ A ARA +L G+G E + GW+ ++
Sbjct: 108 MSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLA 167
Query: 151 -------------------------WLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHS 185
WLE L +T++++SHDRHFL+ V T + L
Sbjct: 168 QALFADPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDY 227
Query: 186 QRIDTYRGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIK 245
+ Y GNY+ + T+ + + ++ +Q F+ F NA+++ S+ +
Sbjct: 228 GELRVYPGNYDEYMTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRAR 287
Query: 246 QLER--LPELKPIEKEVEVVLKFPDTELLSPPILQLSEVNFEYVPGKPILTNVCLGATLE 303
Q+++ L E+K ++ ++F + L L++ + + G P+ N+ L +
Sbjct: 288 QIDKIKLEEVKASSRQ-NPFIRFEQDKKLFRNALEVEGLTKGFDNG-PLFKNLNLLLEVG 345
Query: 304 SRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLL 363
++ ++G NG GK+TLLK ++G + P +GT N + GY++Q H + + +L + +
Sbjct: 346 EKLAVLGTNGVGKSTLLKTLVGDLQPDSGTVKWSENARIGYYAQDHEYEFENDLTVFEWM 405
Query: 364 -EAAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEP 422
+ G ++ R LG S D + LSGG+K R+ F ++ M PN L++DEP
Sbjct: 406 SQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEP 465
Query: 423 TNHLDIETIEALGKAINKY 441
TNHLD+E+IE+L A+ Y
Sbjct: 466 TNHLDMESIESLNMALELY 484
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 40/189 (21%)
Query: 290 KPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHH 349
KP+ N+ + +R ++G NG+GK+T +KI+ G + PT G ++ N + G Q
Sbjct: 14 KPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQ 73
Query: 350 --------VDQLDMNLRCVQLLEA--------AFPGKPQEEYRR---------QLGGFGV 384
+D + M + +L E A P +E+ + ++ G+
Sbjct: 74 FAFEEFTVLDTVIMGHK--ELWEVKQERDRIYALPEMSEEDGYKVADLEVKYGEMDGYSA 131
Query: 385 ---SGDLAL-------QFVGSLSG---GQKSRVAFARMCMAAPNFLVLDEPTNHLDIETI 431
+G+L L Q G +S G K RV A+ A P+ L+LDEPTN+LDI+TI
Sbjct: 132 EARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFADPDILLLDEPTNNLDIDTI 191
Query: 432 EALGKAINK 440
L + +N+
Sbjct: 192 RWLEQVLNE 200
Score = 40.4 bits (93), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 156 LQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNYEAF 198
L+ + TL+ VSHDR F+ S+ T I + +R+ + GNYE +
Sbjct: 481 LELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSGNYEDY 523
>sp|O31716|YKPA_BACSU Uncharacterized ABC transporter ATP-binding protein YkpA
OS=Bacillus subtilis (strain 168) GN=ykpA PE=3 SV=1
Length = 540
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 175/377 (46%), Gaps = 37/377 (9%)
Query: 93 DANMSTELTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKM----- 147
D + EL FAEL EA+ + A+++L GLG + ++ + GG K+
Sbjct: 112 DGIRAAELEGEFAELNGWEAE---SEAAILLKGLGISEDLHTKKMADL-GGSEKVKVLLA 167
Query: 148 ----------------------AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHS 185
AI WLE +L N+ T++VVSHDRHFL+ V T I L
Sbjct: 168 QALFGKPDVLLLDEPTNHLDLQAIQWLEEFLINFENTVIVVSHDRHFLNKVCTHIADLDF 227
Query: 186 QRIDTYRGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIK 245
+I Y GNY+ + + LK Q + + + +Q+F+ F NA+++ S+ K
Sbjct: 228 NKIQIYVGNYDFWYESSQLALKLSQEANKKKEEQIKQLQEFVARFSANASKSKQATSRKK 287
Query: 246 QLER--LPELKPIEKEVEVVLKFPDTELLSPPILQLSEVNFEYVPGKPILTNVCLGATLE 303
LE+ L ++KP + V P+ E + +L++ + + + G +L NV E
Sbjct: 288 LLEKITLDDIKPSSRRYPYVNFTPERE-IGNDVLRVEGLT-KTIDGVKVLDNVSFIMNRE 345
Query: 304 SRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLD-MNLRCVQL 362
+I G N TTL KII G + +GT YF + + + + +L V
Sbjct: 346 DKIAFTGRNELAVTTLFKIISGEMEADSGTFKWGVTTSQAYFPKDNSEYFEGSDLNLVDW 405
Query: 363 LEAAFPGKPQEEYRRQ-LGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDE 421
L P E + R LG SG+ + LSGG+K R ++ ++ N L+LDE
Sbjct: 406 LRQYSPHDQSESFLRGFLGRMLFSGEEVHKKANVLSGGEKVRCMLSKAMLSGANILILDE 465
Query: 422 PTNHLDIETIEALGKAI 438
PTNHLD+E+I AL +
Sbjct: 466 PTNHLDLESITALNNGL 482
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 85/209 (40%), Gaps = 57/209 (27%)
Query: 262 VVLKFPDTELLSPPILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLK 321
V L+F D +L +VN ++ PG C G ++G NGAGK+T LK
Sbjct: 7 VSLRFADRKLFE-------DVNIKFTPGN------CYG--------LIGANGAGKSTFLK 45
Query: 322 IIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQL------------------- 362
++ G I P G + + Q+H + + + V +
Sbjct: 46 VLSGEIEPQTGDVHMSPGERLAVLKQNHFEYEEYEVLKVVIMGHKRLYEVMQEKDAIYMK 105
Query: 363 -------------LEAAFP----GKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVA 405
LE F + + E L G G+S DL + + L G +K +V
Sbjct: 106 PDFSDEDGIRAAELEGEFAELNGWEAESEAAILLKGLGISEDLHTKKMADLGGSEKVKVL 165
Query: 406 FARMCMAAPNFLVLDEPTNHLDIETIEAL 434
A+ P+ L+LDEPTNHLD++ I+ L
Sbjct: 166 LAQALFGKPDVLLLDEPTNHLDLQAIQWL 194
>sp|O34512|YFMM_BACSU Uncharacterized ABC transporter ATP-binding protein YfmM
OS=Bacillus subtilis (strain 168) GN=yfmM PE=3 SV=2
Length = 518
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 199/443 (44%), Gaps = 53/443 (11%)
Query: 38 GQLRIPSHISVLHVEQEVVGDDTPAIDSVLECDTKRQNLLNREKTITQAINN-GTADANM 96
G++ ++ V +++Q V + +I VL+ L E+ + + N G AD +
Sbjct: 58 GKVEWSKNVRVGYLDQHTVLEKGKSIRDVLK--DAFHYLFAMEEEMNEIYNKMGEADPD- 114
Query: 97 STELTQVFAELEAIEADKA-------PARASVILAGLGFTPEMQKRATKHFSGGWRKMAI 149
EL ++ E+ I+ ++ I GLG + +R SGG R +
Sbjct: 115 --ELEKLLEEVGVIQDALTNNDFYVIDSKVEEIARGLGLSDIGLERDVTDLSGGQRTKVL 172
Query: 150 I--------------------------WLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHL 183
+ WL+ YLQ + +++SHD FL+SV I+H+
Sbjct: 173 LAKLLLEKPEILLLDEPTNYLDEQHIEWLKRYLQEYENAFILISHDIPFLNSVINLIYHV 232
Query: 184 HSQRIDTYRGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSK 243
+Q + Y G+Y F ++ ++K QQ E A + ++ V + D N R S+
Sbjct: 233 ENQELTRYVGDYHQF--MEVYEVKKQQLEA-AYKKQQQEVAELKDFVARNKARVSTRNMA 289
Query: 244 IKQLERLPELKPIEKEVEVVLKFPDTELLSPPILQLSEVNFE---YVPG--KPILTNVCL 298
+ + ++L ++ IE E P E P ++ FE V G P+ + L
Sbjct: 290 MSRQKKLDKMDMIELAAEK----PKPEFHFKPARTSGKLIFETKDLVIGYDSPLSRPLNL 345
Query: 299 GATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLR 358
+I + G NG GKTTLLK ++G I P G+ ++ GYF Q V + + N
Sbjct: 346 RMERGQKIALYGANGIGKTTLLKSLLGEIQPLEGSVERGEHIYTGYFEQE-VKETNNN-T 403
Query: 359 CVQLLEAAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLV 418
C++ + + FP Q E R L G++ V LSGG+K++V ++ + N LV
Sbjct: 404 CIEEVWSEFPSYTQYEIRAALAKCGLTTKHIESRVSVLSGGEKAKVRLCKLINSETNLLV 463
Query: 419 LDEPTNHLDIETIEALGKAINKY 441
LDEPTNHLD + E L +A+ +Y
Sbjct: 464 LDEPTNHLDADAKEELKRALKEY 486
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 49/197 (24%)
Query: 290 KPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHH 349
+ I NV + ++G NG GK+T + II G + P G +N++ GY QH
Sbjct: 16 RAIFNNVSFRLLKGEHVGLIGANGEGKSTFMNIITGKLEPDEGKVEWSKNVRVGYLDQHT 75
Query: 350 V-------------------------------------DQLDMNLRCVQLLEAAFPGK-- 370
V D+L+ L V +++ A
Sbjct: 76 VLEKGKSIRDVLKDAFHYLFAMEEEMNEIYNKMGEADPDELEKLLEEVGVIQDALTNNDF 135
Query: 371 -----PQEEYRRQLGGFGVSGDLALQF-VGSLSGGQKSRVAFARMCMAAPNFLVLDEPTN 424
EE R G G+S D+ L+ V LSGGQ+++V A++ + P L+LDEPTN
Sbjct: 136 YVIDSKVEEIAR---GLGLS-DIGLERDVTDLSGGQRTKVLLAKLLLEKPEILLLDEPTN 191
Query: 425 HLDIETIEALGKAINKY 441
+LD + IE L + + +Y
Sbjct: 192 YLDEQHIEWLKRYLQEY 208
>sp|P43672|UUP_ECOLI ABC transporter ATP-binding protein uup OS=Escherichia coli (strain
K12) GN=uup PE=1 SV=2
Length = 635
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 213/450 (47%), Gaps = 49/450 (10%)
Query: 29 LHLEGGMVSGQLRIPSHISVLHVEQEVVGD-DTPAIDSVLECDTKRQNLLNREKTITQAI 87
L+ E G+ G++ + V ++Q+ + + D V E ++ L R I++ +
Sbjct: 49 LNREQGLDDGRIIYEQDLIVARLQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYHDISRLV 108
Query: 88 NNGTADANMSTELTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGW-RK 146
N ++ N++ EL +V +L+ + R + +LA LG P + A SGGW RK
Sbjct: 109 MNDPSEKNLN-ELAKVQEQLDHHNLWQLENRINEVLAQLGLDPNV---ALSSLSGGWLRK 164
Query: 147 MA-------------------------IIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIF 181
A I WLE +L+ + T++ +SHDR F+ ++ T I
Sbjct: 165 AALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTFNGTIIFISHDRSFIRNMATRIV 224
Query: 182 HLHSQRIDTYRGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQ 241
L ++ TY GNY+ + K E L+ + E++ R+ Q+ + + R + +
Sbjct: 225 DLDRGKLVTYPGNYDQYLLEKEEALRVE--ELQNAEFDRKLAQEEVWIRQGIKARRTRNE 282
Query: 242 SKIKQLERLPELKPIEKEV--EVVLKFPDTELLSPPILQLSEVNFEYVPGKPILTNVCLG 299
+++ L+ + + +EV ++ + + ++ +V ++ V GK ++ +
Sbjct: 283 GRVRALKAMRRERGERREVMGTAKMQVEEASRSGKIVFEMEDVCYQ-VNGKQLVKDFSAQ 341
Query: 300 ATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRC 359
+I ++G NG GKTTLLK+++G + +G V L+ YF QH +LD +
Sbjct: 342 VLRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHVGTKLEVAYFDQHRA-ELDPDKTV 400
Query: 360 VQLL-----EAAFPGKPQEEYRRQLG---GFGVSGDLALQFVGSLSGGQKSRVAFARMCM 411
+ L E GKP R LG F A+ V +LSGG+++R+ AR+ +
Sbjct: 401 MDNLAEGKQEVMVNGKP----RHVLGYLQDFLFHPKRAMTPVRALSGGERNRLLLARLFL 456
Query: 412 AAPNFLVLDEPTNHLDIETIEALGKAINKY 441
N L+LDEPTN LD+ET+E L + I+ Y
Sbjct: 457 KPSNLLILDEPTNDLDVETLELLEELIDSY 486
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 75/182 (41%), Gaps = 41/182 (22%)
Query: 291 PILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQ--- 347
P+L N L R+C+VG NGAGK+TL+KI+ G ++L Q
Sbjct: 17 PLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNREQGLDDGRIIYEQDLIVARLQQDPP 76
Query: 348 -------------------------HHVDQLDMN----------LRCVQLLEAAFPGKPQ 372
H + +L MN + + L+ + +
Sbjct: 77 RNVEGSVYDFVAEGIEEQAEYLKRYHDISRLVMNDPSEKNLNELAKVQEQLDHHNLWQLE 136
Query: 373 EEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIE 432
L G+ ++AL SLSGG + A R ++ P L+LDEPTNHLDIETI+
Sbjct: 137 NRINEVLAQLGLDPNVAL---SSLSGGWLRKAALGRALVSNPRVLLLDEPTNHLDIETID 193
Query: 433 AL 434
L
Sbjct: 194 WL 195
>sp|O53204|Y2477_MYCTU Uncharacterized ABC transporter ATP-binding protein Rv2477c/MT2552
OS=Mycobacterium tuberculosis GN=Rv2477c PE=1 SV=1
Length = 558
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 147/300 (49%), Gaps = 17/300 (5%)
Query: 148 AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNYEAFDKIKTEKLK 207
++ WLE +L ++P +L V+HDR+FLD+V I L R Y GNY + + K E+L
Sbjct: 194 SVQWLEQHLASYPGAILAVTHDRYFLDNVAEWILELDRGRAYPYEGNYSTYLEKKAERLA 253
Query: 208 NQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIK-QLERLPELKPIEKEVEVVLKF 266
Q R+ +A+ R + + + A + Q+K K +L+R E+ E E L F
Sbjct: 254 VQGRK-DAKLQKR-----LTEELAWVRSGAKARQAKSKARLQRYEEMA-AEAEKTRKLDF 306
Query: 267 PDTELLSPPILQLSEVNFEYV----PGKPILTNVCLGATLESRICIVGDNGAGKTTLLKI 322
+ ++ P L V +++ G+ ++ ++ + ++G NG GKTTL K
Sbjct: 307 EEIQIPVGPRLGNVVVEVDHLDKGYDGRALIKDLSFSLPRNGIVGVIGPNGVGKTTLFKT 366
Query: 323 IMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFP----GKPQEEYRRQ 378
I+G+ +P +G+ V +K Y Q +D +++ G+ + R
Sbjct: 367 IVGLETPDSGSVKVGETVKLSYVDQARA-GIDPRKTVWEVVSDGLDYIQVGQTEVPSRAY 425
Query: 379 LGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAI 438
+ FG G + G LSGG+++R+ A N ++LDEPTN LD+ET+ +L A+
Sbjct: 426 VSAFGFKGPDQQKPAGVLSGGERNRLNLALTLKQGGNLILLDEPTNDLDVETLGSLENAL 485
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 36/188 (19%)
Query: 290 KPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHH 349
K IL +V L ++I +VG NGAGK+++L+I+ G+ P G + G Q
Sbjct: 18 KVILDDVTLSFYPGAKIGVVGPNGAGKSSVLRIMAGLDKPNNGDAFLATGATVGILQQEP 77
Query: 350 VDQLDMNLR-------------------CVQLLEAAFPGKPQEEYRR------QLGGFGV 384
D +R +L+ + + EE R + +
Sbjct: 78 PLNEDKTVRGNVEEGMGDIKIKLDRFNEVAELMATDYTDELMEEMGRLQEELDHADAWDL 137
Query: 385 SGDL-----------ALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEA 433
L A + V +LSGG++ RVA ++ ++ P+ L+LDEPTNHLD E+++
Sbjct: 138 DAQLEQAMDALRCPPADEPVTNLSGGERRRVALCKLLLSKPDLLLLDEPTNHLDAESVQW 197
Query: 434 LGKAINKY 441
L + + Y
Sbjct: 198 LEQHLASY 205
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 152 LENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDT-----YRGNYEAFDKIKTEKL 206
LEN L N+P +V+SHDR FLD T I + + GN+ A+++ K E+L
Sbjct: 481 LENALLNFPGCAVVISHDRWFLDRTCTHILAWEGDDDNEAKWFWFEGNFGAYEENKVERL 540
Query: 207 KNQQREIEAQRMHR 220
++A R HR
Sbjct: 541 G-----VDAARPHR 549
>sp|P0A9W5|YJJK_SHIFL Uncharacterized ABC transporter ATP-binding protein YjjK
OS=Shigella flexneri GN=yjjK PE=3 SV=2
Length = 555
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 150/299 (50%), Gaps = 10/299 (3%)
Query: 148 AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNYEAFDKIKTEKLK 207
++ WLE +L ++ T++ ++HDR+FLD+V I L + GNY ++ + K ++L
Sbjct: 197 SVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLA 256
Query: 208 NQQREIEAQRMHREHVQKFIDTFRYNA-NRASSVQSKIKQLERLPELKPIEKEVEVVLKF 266
Q+ EA R R+ ++K ++ R R S ++++ + E L + ++ L
Sbjct: 257 -QEASQEAAR--RKSIEKELEWVRQGTKGRQSKGKARLARFEELNSTEYQKRNETNELFI 313
Query: 267 PDTELLSPPILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGI 326
P L +L++S + Y + ++ ++ + + I+G NGAGK+TL ++I G
Sbjct: 314 PPGPRLGDKVLEVSNLRKSY-GDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQ 372
Query: 327 ISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFP----GKPQEEYRRQLGGF 382
P +GT T+ +K Q D +D + + + G + R +G F
Sbjct: 373 EQPDSGTITLGETVKLASVDQFR-DSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRF 431
Query: 383 GVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAINKY 441
G + VG LSGG++ R+ A++ N L+LDEPTN LDIET+ AL A+ ++
Sbjct: 432 NFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEF 490
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 35/49 (71%)
Query: 393 VGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAINKY 441
+ +LSGG++ RVA R+ + P+ L+LDEPTNHLD E++ L + ++ +
Sbjct: 160 IANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDF 208
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 288 PGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQ 347
P + IL N+ L ++I ++G NGAGK+TLL+I+ GI G ++K GY Q
Sbjct: 17 PKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQ 76
Query: 348 H 348
Sbjct: 77 E 77
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 152 LENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQ-RIDTYRGNYEAFDKIKTEKLKNQQ 210
LEN L +P +V+SHDR FLD + T I + +++ + GN+ +++ K L
Sbjct: 483 LENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGADA 542
Query: 211 REIEAQRMHREHVQK 225
+E +R+ + + K
Sbjct: 543 --LEPKRIKYKRIAK 555
>sp|P0A9W3|YJJK_ECOLI Uncharacterized ABC transporter ATP-binding protein YjjK
OS=Escherichia coli (strain K12) GN=yjjK PE=1 SV=2
Length = 555
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 150/299 (50%), Gaps = 10/299 (3%)
Query: 148 AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNYEAFDKIKTEKLK 207
++ WLE +L ++ T++ ++HDR+FLD+V I L + GNY ++ + K ++L
Sbjct: 197 SVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLA 256
Query: 208 NQQREIEAQRMHREHVQKFIDTFRYNA-NRASSVQSKIKQLERLPELKPIEKEVEVVLKF 266
Q+ EA R R+ ++K ++ R R S ++++ + E L + ++ L
Sbjct: 257 -QEASQEAAR--RKSIEKELEWVRQGTKGRQSKGKARLARFEELNSTEYQKRNETNELFI 313
Query: 267 PDTELLSPPILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGI 326
P L +L++S + Y + ++ ++ + + I+G NGAGK+TL ++I G
Sbjct: 314 PPGPRLGDKVLEVSNLRKSY-GDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQ 372
Query: 327 ISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFP----GKPQEEYRRQLGGF 382
P +GT T+ +K Q D +D + + + G + R +G F
Sbjct: 373 EQPDSGTITLGETVKLASVDQFR-DSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRF 431
Query: 383 GVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAINKY 441
G + VG LSGG++ R+ A++ N L+LDEPTN LDIET+ AL A+ ++
Sbjct: 432 NFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEF 490
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 35/49 (71%)
Query: 393 VGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAINKY 441
+ +LSGG++ RVA R+ + P+ L+LDEPTNHLD E++ L + ++ +
Sbjct: 160 IANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDF 208
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 288 PGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQ 347
P + IL N+ L ++I ++G NGAGK+TLL+I+ GI G ++K GY Q
Sbjct: 17 PKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQ 76
Query: 348 H 348
Sbjct: 77 E 77
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 152 LENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQ-RIDTYRGNYEAFDKIKTEKLKNQQ 210
LEN L +P +V+SHDR FLD + T I + +++ + GN+ +++ K L
Sbjct: 483 LENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGADA 542
Query: 211 REIEAQRMHREHVQK 225
+E +R+ + + K
Sbjct: 543 --LEPKRIKYKRIAK 555
>sp|P0A9W4|YJJK_ECO57 Uncharacterized ABC transporter ATP-binding protein YjjK
OS=Escherichia coli O157:H7 GN=yjjK PE=3 SV=2
Length = 555
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 150/299 (50%), Gaps = 10/299 (3%)
Query: 148 AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNYEAFDKIKTEKLK 207
++ WLE +L ++ T++ ++HDR+FLD+V I L + GNY ++ + K ++L
Sbjct: 197 SVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLA 256
Query: 208 NQQREIEAQRMHREHVQKFIDTFRYNA-NRASSVQSKIKQLERLPELKPIEKEVEVVLKF 266
Q+ EA R R+ ++K ++ R R S ++++ + E L + ++ L
Sbjct: 257 -QEASQEAAR--RKSIEKELEWVRQGTKGRQSKGKARLARFEELNSTEYQKRNETNELFI 313
Query: 267 PDTELLSPPILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGI 326
P L +L++S + Y + ++ ++ + + I+G NGAGK+TL ++I G
Sbjct: 314 PPGPRLGDKVLEVSNLRKSY-GDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQ 372
Query: 327 ISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFP----GKPQEEYRRQLGGF 382
P +GT T+ +K Q D +D + + + G + R +G F
Sbjct: 373 EQPDSGTITLGETVKLASVDQFR-DSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRF 431
Query: 383 GVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAINKY 441
G + VG LSGG++ R+ A++ N L+LDEPTN LDIET+ AL A+ ++
Sbjct: 432 NFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEF 490
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 35/49 (71%)
Query: 393 VGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAINKY 441
+ +LSGG++ RVA R+ + P+ L+LDEPTNHLD E++ L + ++ +
Sbjct: 160 IANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDF 208
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 288 PGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQ 347
P + IL N+ L ++I ++G NGAGK+TLL+I+ GI G ++K GY Q
Sbjct: 17 PKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQ 76
Query: 348 H 348
Sbjct: 77 E 77
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 152 LENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQ-RIDTYRGNYEAFDKIKTEKLKNQQ 210
LEN L +P +V+SHDR FLD + T I + +++ + GN+ +++ K L
Sbjct: 483 LENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGADA 542
Query: 211 REIEAQRMHREHVQK 225
+E +R+ + + K
Sbjct: 543 --LEPKRIKYKRIAK 555
>sp|P57445|UUP_BUCAI ABC transporter ATP-binding protein uup OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=uup PE=3 SV=1
Length = 596
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 150/291 (51%), Gaps = 25/291 (8%)
Query: 148 AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNYEAFDKIKTE--K 205
I WLE +L+ + ++L VSHDR+F+ +V T I L ++ ++ G+YE F K+K E +
Sbjct: 160 TIKWLETFLKKFSGSILFVSHDRNFIQNVSTRIIDLDRGKLVSWPGDYENFIKLKNESYR 219
Query: 206 LKNQQREIEAQRMHREH--VQKFIDTFRYNANRASSVQSKIKQLERLPELKPIEKEVEVV 263
++ Q+++ + + +E ++K I R++ + ++K+L+ L + + K++E
Sbjct: 220 IEKIQKQLFDKNLEKEEQWIRKGIKA------RSTRNEGRVKKLKILQKEQKDYKKIE-- 271
Query: 264 LKFPDTEL------LSPPILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKT 317
K + E+ L I +L ++F V K I+ N ++ ++GDNG GK+
Sbjct: 272 -KINNIEINQSKNYLGKIIFKLDNIDF-LVNNKIIIKNFSSIIQHGDKLALIGDNGCGKS 329
Query: 318 TLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLL----EAAFPGKPQE 373
TL+KII+G P G + + LK YF Q+ L+ N ++ + E ++
Sbjct: 330 TLIKIIIGENKPQKGKIYIGKGLKISYFDQNR-SFLNPNKSIIENIDYGKEKILLNSREQ 388
Query: 374 EYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTN 424
R L F + V +LSGG+ +R+ A++ + N L+LDEPTN
Sbjct: 389 HIIRYLKNFLFKPNQLKSLVKTLSGGECNRLLLAQLFLKPSNVLILDEPTN 439
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 12/146 (8%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLE 364
R+C++G NGAGK+TLLKII G +N Y Q++ L++++ L
Sbjct: 31 RVCLIGKNGAGKSTLLKIINKKQDLDEGQIIYKKNTTTAYLEQNNPKNLNISIYDFIALG 90
Query: 365 AAFPGKPQEEYRRQLGGFGVSGDLALQFVG--------SLSGGQKSRVAFARMCMAAPNF 416
K ++++ ++ V + ++ + LSGG +VA R+ + P+
Sbjct: 91 LKEHEKNKKKHTNEI----VKIEKIIELIKLNKNTLLSHLSGGLLRKVALGRVLVREPDI 146
Query: 417 LVLDEPTNHLDIETIEALGKAINKYT 442
L+LDEPTNHLD++TI+ L + K++
Sbjct: 147 LLLDEPTNHLDMKTIKWLETFLKKFS 172
>sp|Q57242|UUP1_HAEIN ABC transporter ATP-binding protein uup-1 OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=uup-A
PE=3 SV=1
Length = 647
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 202/433 (46%), Gaps = 53/433 (12%)
Query: 35 MVSGQLRIPSHISVLHVEQEVVGDDTPAI-DSVLECDTKRQNLLNREKTITQAINNGTAD 93
M G+++ + V +EQ+ + I D V E +LL I+ + +D
Sbjct: 55 MDDGKIQYEKDLVVSRLEQDPPRNAQGNIFDYVAEGVGHLTDLLKEYHQISVQLEENYSD 114
Query: 94 ANMSTELTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGW-RKMA---- 148
+S +L QV A+LE + + + + +L LG P + A SGGW RK A
Sbjct: 115 QILS-QLEQVQAKLEHADGWRFENKINEVLLKLGLNPNTKLSA---LSGGWLRKAALARA 170
Query: 149 ---------------------IIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQR 187
I WLEN+L ++ +++ +SHDR F+ + T I L +
Sbjct: 171 LVCDPDVLLLDEPTNHLDVEAIEWLENFLLDFQGSIVFISHDRSFIRKMATRIVDLDRGQ 230
Query: 188 IDTYRGNYEAFDKIKTEKLKNQ--QREIEAQRMHREHVQKFIDTFRYNAN-RASSVQSKI 244
+ +Y GNY+ + K E L+ + Q E+ +R+ +E V R R + + ++
Sbjct: 231 LVSYPGNYDLYLTTKEENLRVEALQNELFDKRLAQEEVW-----IRQGIKARRTRNEGRV 285
Query: 245 KQLERLPELKPIEKEVEVVLKFP-DTELLSPPIL-QLSEVNFEYVPGKPILTNVCLGATL 302
+ L+ + E + ++V K DT S I+ ++ +V++E + GK +L +
Sbjct: 286 RALKVMREERRQRRDVMGTAKLQLDTSSRSGKIVFEMEDVSYE-IAGKTLLKDFSTTILR 344
Query: 303 ESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQL 362
+I +VG NG GKTT +K+++G I PT+G L+ YF Q+ D LD +
Sbjct: 345 GDKIALVGPNGCGKTTFIKLLLGEIQPTSGKIRCGTKLEIAYFDQYRAD-LDPE---KTV 400
Query: 363 LEAAFPGKPQEEY----RRQLG---GFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPN 415
++ GK E R LG F A+ V +LSGG+++R+ A++ + N
Sbjct: 401 MDNVADGKQDIEINGVKRHVLGYLQDFLFPPKRAMTPVKALSGGERNRLLLAKLLLKPNN 460
Query: 416 FLVLDEPTNHLDI 428
L+LDEPTN LD+
Sbjct: 461 LLILDEPTNDLDV 473
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 80/182 (43%), Gaps = 41/182 (22%)
Query: 291 PILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLK--------- 341
P+L + L +C+VG NGAGK+TLLKII G + G ++L
Sbjct: 17 PLLDHAELHIEPNECVCLVGRNGAGKSTLLKIIAGDVLMDDGKIQYEKDLVVSRLEQDPP 76
Query: 342 -------FGYFS---------------------QHHVDQLDMNLRCVQL-LEAAFPGKPQ 372
F Y + +++ DQ+ L VQ LE A + +
Sbjct: 77 RNAQGNIFDYVAEGVGHLTDLLKEYHQISVQLEENYSDQILSQLEQVQAKLEHADGWRFE 136
Query: 373 EEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIE 432
+ L G++ + L +LSGG + A AR + P+ L+LDEPTNHLD+E IE
Sbjct: 137 NKINEVLLKLGLNPNTKL---SALSGGWLRKAALARALVCDPDVLLLDEPTNHLDVEAIE 193
Query: 433 AL 434
L
Sbjct: 194 WL 195
Score = 35.4 bits (80), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 158 NWPTTLLVVSHDRHFLDSVPTDIFHLHSQ-RIDTYRGNYEAFDKIKTEKLKNQQREIEAQ 216
++ TLL+VSHDR F+D+ T+ + + ++ Y G + + + ++ E +A+
Sbjct: 485 DYQGTLLIVSHDRQFIDNTATECYLFEGKGHLNKYVGGFFDAKQQQANFWASKAVEEQAK 544
Query: 217 RMHREHVQKFIDTFRYNANRASSVQSKIKQLERLPELKPIEKEVEVVLKFPDTELLSPPI 276
E +++ ++ SV+ K+ L +L + +E+E + E+ P
Sbjct: 545 AKKSEPLKEESAVKNDRTSKPKSVKLSYKEQRELEQLPQLLEELETKITVLQAEIADPAF 604
Query: 277 LQ 278
Q
Sbjct: 605 FQ 606
>sp|O06476|YFMR_BACSU Uncharacterized ABC transporter ATP-binding protein YfmR
OS=Bacillus subtilis (strain 168) GN=yfmR PE=3 SV=1
Length = 629
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 150/305 (49%), Gaps = 24/305 (7%)
Query: 149 IIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNYEAFDKIKTEK-LK 207
I WLE YL +P +++V+HDR+FL+ V I+ L + TY+GNYE F + + E+ +
Sbjct: 194 IEWLEGYLSQYPGAVMLVTHDRYFLNRVTNRIYELERGSLYTYKGNYEVFLEKRAEREAQ 253
Query: 208 NQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIKQLERLPELKPIEKEVEVVLKFP 267
+Q+E + Q + R + R R++ +++I ++E L E + +
Sbjct: 254 AEQKETKRQNLLRRELAWL---RRGAKARSTKQKARIDRVETLKEQTGPQSSGSLDFAIG 310
Query: 268 DTELLSPPILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGII 327
+ L +++ V Y G+ ++ RI I+G NG GKTTLL + G
Sbjct: 311 -SHRLGKQVIEAENVMIAY-DGRMLVDRFNELVIPGERIGIIGPNGIGKTTLLNALAGRH 368
Query: 328 SPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFPGKPQEEYRRQLGGFGVSGD 387
+P G T+ + ++ GY++Q H +++ L+ + + K E + G ++ +
Sbjct: 369 TPDGGDITIGQTVRIGYYTQDH-SEMNGELKVIDYI------KETAEVVKTADGDMITAE 421
Query: 388 LALQ-----------FVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGK 436
L+ ++ LSGG+K R+ ++ M PN L LDEPTN LD ET+ L
Sbjct: 422 QMLERFLFPRSMQQTYIRKLSGGEKRRLYLLQVLMQEPNVLFLDEPTNDLDTETLSVLED 481
Query: 437 AINKY 441
I+++
Sbjct: 482 YIDQF 486
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 41/191 (21%)
Query: 290 KPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQ-- 347
K + ++ RI ++G NG GK+TLLK+I G+ S G T +++ + Q
Sbjct: 16 KTLFDHISFHIEENERIGLIGPNGTGKSTLLKVIAGLESIEEGEITKSGSVQVEFLHQDP 75
Query: 348 ----------HHVDQLDMNLRCVQLLEAAFP--GKPQEEYRRQ----------------- 378
H ++ ++ E A GK E +RQ
Sbjct: 76 ELPAGQTVLEHIYSGESAVMKTLREYEKALYELGKDPENEQRQKHLLAAQAKMDANNAWD 135
Query: 379 --------LGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIET 430
L GV+ + V LSGGQK RVA A+ + + L+LDEPTNHLD ET
Sbjct: 136 ANTLAKTVLSKLGVND--VTKPVNELSGGQKKRVAIAKNLIQPADLLILDEPTNHLDNET 193
Query: 431 IEALGKAINKY 441
IE L +++Y
Sbjct: 194 IEWLEGYLSQY 204
Score = 36.2 bits (82), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 152 LENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQR-IDTYRGNYEAF 198
LE+Y+ +P ++ VSHDR+FLD V + I ++G+Y +
Sbjct: 479 LEDYIDQFPGVVITVSHDRYFLDRVVDRLIVFEGNGVISRFQGSYSDY 526
>sp|P45127|Y1252_HAEIN Uncharacterized ABC transporter ATP-binding protein HI_1252
OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121
/ KW20 / Rd) GN=HI_1252 PE=1 SV=1
Length = 556
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 144/296 (48%), Gaps = 10/296 (3%)
Query: 148 AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNYEAFDKIKTEKLK 207
++ WLE +L ++ T++ ++HDR+FLD+V I L + GNY ++ + K ++L+
Sbjct: 198 SVAWLERFLHDYEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKEKRLE 257
Query: 208 NQQREIEAQRMHREHVQKFIDTFRYN-ANRASSVQSKIKQLERLPELKPIEKEVEVVLKF 266
+Q + ++ + K ++ R N R + ++++ + + L + ++ L
Sbjct: 258 QEQ---ATENARQKSIAKELEWVRQNPKGRQAKSKARMARFDELNSGEYQKRNETNELFI 314
Query: 267 PDTELLSPPILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGI 326
P L ++++ + Y + ++ ++ + + I+G NGAGK+TL +++ G
Sbjct: 315 PPGPRLGDKVIEVQNLTKSY-GDRTLIDDLSFSIPKGAIVGIIGANGAGKSTLFRMLSGQ 373
Query: 327 ISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFP----GKPQEEYRRQLGGF 382
P +G+ T+ + Q D +D + + G + R +G F
Sbjct: 374 EQPDSGSVTMGETVVLASVDQFR-DSMDDKKTVWEEVSNGQDILTIGNFEIPSRAYVGRF 432
Query: 383 GVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAI 438
G + VG LSGG++ R+ A++ N L+LDEPTN LD+ET+ AL AI
Sbjct: 433 NFKGVDQQKRVGELSGGERGRLHLAKLLQRGGNVLLLDEPTNDLDVETLRALENAI 488
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 396 LSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAINKY 441
LSGG++ RVA R+ + P+ L+LDEPTNHLD E++ L + ++ Y
Sbjct: 164 LSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDY 209
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 288 PGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQ 347
P + IL ++ L ++I ++G NGAGK+TLL+I+ G+ G +K GY Q
Sbjct: 18 PKRHILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPQPGIKIGYLPQ 77
Query: 348 H 348
Sbjct: 78 E 78
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 152 LENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQ-RIDTYRGNYEAFDKIKTEKLKN 208
LEN + +P +V+SHDR FLD + T I + ++ Y GN+ +++ K + L +
Sbjct: 484 LENAILEFPGCAMVISHDRWFLDRIATHILDYGDEGKVTFYEGNFSDYEEWKKKTLGD 541
>sp|P39115|EXPZ_BACSU Nucleotide-binding protein ExpZ OS=Bacillus subtilis (strain 168)
GN=expZ PE=3 SV=2
Length = 547
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 143/315 (45%), Gaps = 35/315 (11%)
Query: 156 LQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNYEAFDKIKTEKLKNQQREIEA 215
L+++ T+++VSHDR+FLD T I+ L Q + ++GNY + K + +K QQRE E
Sbjct: 146 LKHYNGTVILVSHDRYFLDEAATKIWSLEDQTLIEFKGNYSGYMKFREKKRLTQQREYEK 205
Query: 216 Q-------------------RMHREHVQK--FIDTFRYNANRASS-VQSKIKQLERLPE- 252
Q + H + +K F + R A R + ++SK K+LE+ E
Sbjct: 206 QQKMVERIEAQMNGLASWSEKAHAQSTKKEGFKEYHRVKAKRTDAQIKSKQKRLEKELEK 265
Query: 253 --LKPIEKEVEVVLKFPDTELLSPPILQLSEVNFEYVPGKPILTNVCLGATLESRICIVG 310
+P+ E V T L++ V + + + N ++ I+G
Sbjct: 266 AKAEPVTPEYTVRFSIDTTHKTGKRFLEVQNVTKAFGE-RTLFKNANFTIQHGEKVAIIG 324
Query: 311 DNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFPG- 369
NG+GKTTLL II+G G+ V + GY +Q D L Q E F
Sbjct: 325 PNGSGKTTLLNIILG-QETAEGSVWVSPSANIGYLTQEVFD-----LPLEQTPEELFENE 378
Query: 370 --KPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLD 427
K + + + G + + + +S G++ ++ + + L+LDEPTNHLD
Sbjct: 379 TFKARGHVQNLMRHLGFTAAQWTEPIKHMSMGERVKIKLMAYILEEKDVLILDEPTNHLD 438
Query: 428 IETIEALGKAINKYT 442
+ + E L + +++Y+
Sbjct: 439 LPSREQLEETLSQYS 453
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 276 ILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRT 335
I+ L+ V++E V + + +V I I+G NGAGK+TLL +I ++P G
Sbjct: 4 IVTLTNVSYE-VKDQTVFKHVNASVQQGDIIGIIGKNGAGKSTLLHLIHNDLAPAQG--- 59
Query: 336 VHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFPGKPQEEYRRQLGGFGVSGDLALQFVGS 395
+ + D+ L V+ AA+ Q ++L + L+
Sbjct: 60 -------------QILRKDIKLALVEQETAAYSFADQTPAEKKLLE---KWHVPLRDFHQ 103
Query: 396 LSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAINKY 441
LSGG+K + A+ + L+LDEPTNHLD ++++ L + + Y
Sbjct: 104 LSGGEKLKARLAKGLSEDADLLLLDEPTNHLDEKSLQFLIQQLKHY 149
>sp|O14134|ELF1_SCHPO mRNA export factor elf1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=elf1 PE=1 SV=1
Length = 1057
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 119/272 (43%), Gaps = 73/272 (26%)
Query: 119 ASVILAGLGFTPEMQKRATKHFSGGWR---KMA-----------------------IIWL 152
A+ L +GFT EMQ+ SGGW+ ++A I WL
Sbjct: 542 AADALHSVGFTAEMQENPVASLSGGWKMKLELARAMLQKADILLLDEPTNHLDVANIAWL 601
Query: 153 ENYLQNWPT-TLLVVSHDRHFLDSVPTDIFHL-----HSQRIDTYRGNYEAFDKIKTEKL 206
E YL + T L+VSHD FLD V TDI H ++++ Y+GN AF K+K
Sbjct: 602 EAYLTSQKNITCLIVSHDSSFLDHVCTDIIHYEGVKNQAKKLGYYQGNLSAFVKVKP--- 658
Query: 207 KNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIKQLERLPELKPIEKEVEVVLKF 266
E ++ +KF+ + + ++ RL
Sbjct: 659 -----EAKSYYTLTATNEKFVFP-------PPGILTGVRSNTRL---------------- 690
Query: 267 PDTELLSPPILQLSEVNFEYVPGKP-ILTNVCLGATLESRICIVGDNGAGKTTLLKIIMG 325
IL+++ ++ Y K L NV +G +L SR+ I+G NGAGK+TL+K+++G
Sbjct: 691 ---------ILKMTNASYTYPNAKKKSLDNVTVGLSLSSRVAILGPNGAGKSTLIKVLIG 741
Query: 326 IISPTAGTRTVHRNLKFGYFSQHHVDQLDMNL 357
+ P G H NL+ GY +QH LD +L
Sbjct: 742 EVIPQEGKVFKHPNLRVGYVAQHAFHHLDQHL 773
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 373 EEYRRQLGGFGVSGDLA-LQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETI 431
E+ R G+ GD+A + SLSGGQK +V A P LVLDEPTN LD + +
Sbjct: 887 EDIRAHFEDVGLPGDIADYSPISSLSGGQKVKVVIAACLWNNPQLLVLDEPTNFLDRDAL 946
Query: 432 EALGKAINKY 441
L AI +
Sbjct: 947 GGLAVAIRDW 956
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 289 GKPILTNVCLGATLESRICIVGDNGAGKTTLLKII-----MGIISPT-AGTRTVHRNLKF 342
G+ +L++ L R +VG NG GK+TLL+ I SP T V +L+
Sbjct: 456 GRLLLSHTNLHLYRGHRYGVVGHNGCGKSTLLRAIGDYKVENFPSPDEVKTCFVAHSLQG 515
Query: 343 GYFSQHHVDQLDMNLRCVQLLEAAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKS 402
S +D + + + + ++E L G + ++ V SLSGG K
Sbjct: 516 EDTSMAILDFVAQDKALLTM------NVTRQEAADALHSVGFTAEMQENPVASLSGGWKM 569
Query: 403 RVAFARMCMAAPNFLVLDEPTNHLDIETIEAL 434
++ AR + + L+LDEPTNHLD+ I L
Sbjct: 570 KLELARAMLQKADILLLDEPTNHLDVANIAWL 601
>sp|P45167|UUP2_HAEIN ABC transporter ATP-binding protein uup-2 OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=uup-B
PE=3 SV=1
Length = 459
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 152/293 (51%), Gaps = 22/293 (7%)
Query: 148 AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNYEAFDKIKTEKLK 207
AI WLEN+L ++ +++ +SHDR + + T I L ++ +Y GNY+ + K E L+
Sbjct: 3 AIEWLENFLLDFQGSIVFISHDRSVIRKMATRIVDLDRGQLQSYLGNYDLYLTTKEENLR 62
Query: 208 NQ--QREIEAQRMHREHVQKFIDTFRYNAN-RASSVQSKIKQLERLPELKPIEKEVEVVL 264
+ Q E+ +R+ +E V R R + + +++ L+ + E + +EV
Sbjct: 63 VEALQNELFDKRLAQEDVW-----IRQGIKARRTRNEGRVRALKAMREERRQRREVMGTA 117
Query: 265 KFP-DTELLSPPIL-QLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKI 322
K DT S I+ ++ +V++E + GK +L + +I +VG NG GKTT +K+
Sbjct: 118 KLQLDTSSRSGKIVFEMEDVSYE-IAGKTLLKDFSTTILRGDKIALVGPNGCGKTTFIKL 176
Query: 323 IMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFPGKPQEE---YRRQL 379
++G I PT+G L+ YF Q+ D LD + V ++ GK E +R +
Sbjct: 177 LLGEIQPTSGKIRCGTKLEIAYFDQYRAD-LDPE-KIV--MDNVADGKQDIEINGVKRHV 232
Query: 380 GG----FGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDI 428
G F A+ V +LSGG+++R+ A++ + N L+LDEPTN LD+
Sbjct: 233 LGYLQEFLFPPKRAMTPVKALSGGERNRLLLAKLLLKPNNLLILDEPTNDLDV 285
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Query: 158 NWPTTLLVVSHDRHFLDSVPTDIFHLHSQ-RIDTYRGNYEAFDKIKTEKLKNQQREIEAQ 216
++ TLL+VSHDR F+D+ T+ + + R++ Y G + + + ++ E +A+
Sbjct: 297 DYQGTLLIVSHDRQFIDNTATECYLFEGEGRLNKYVGGFFDAKQQQANFWASKAVEEQAK 356
Query: 217 RMHREHVQKFIDTFRYNANRASSVQSKIKQLERLPELKPIEKEVEVVLKFPDTELLSPPI 276
E +++ ++ SV+ K+ L +L + +E+E + E+ P
Sbjct: 357 AKKSEPLKEESAVKNDRTSKPKSVKLSYKEQRELEQLPQLLEELETKITTLQAEIADPAF 416
Query: 277 LQ 278
Q
Sbjct: 417 FQ 418
>sp|Q8K9I3|UUP_BUCAP ABC transporter ATP-binding protein uup OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=uup PE=3 SV=1
Length = 592
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 138/286 (48%), Gaps = 15/286 (5%)
Query: 148 AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNYEAFDKIKTEKLK 207
I WLE +L+ + T L +SHDR F+ ++ T I L ++ ++ G+Y+ F K+K E
Sbjct: 159 TIAWLEKFLKKFSGTTLFISHDRSFIQNLCTRIIDLDRGKLTSFPGDYKEFIKLKKE--- 215
Query: 208 NQQREIEAQRMHREHVQKFIDTFRYNAN-RASSVQSKIKQLERLPELKPIEKEVEVVLKF 266
N + E +++ +H++K R R + + +++ L+ L + K++E
Sbjct: 216 NNRIEKTKKKLFDQHLEKEEIWIRKGIKARTTRNEGRVRNLKVLRKEYKNYKKIENFNNV 275
Query: 267 PDTELLS---PPILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKII 323
E+ + I +L ++F ++ K I+ + +I ++G+NG+GK+T++KI+
Sbjct: 276 IINEIKNYSGKIIFKLKNISF-FIEKKTIIQSFSSIIQYGDKIGLIGNNGSGKSTMIKIL 334
Query: 324 MGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLL-----EAAFPGKPQEEYRRQ 378
MG G+ L YF Q LD N ++ + + GK Q
Sbjct: 335 MGEKKIQKGSIHFGTKLNIAYFDQDR-STLDSNKSILENVNNGREKIVLNGKEQH-LIGY 392
Query: 379 LGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTN 424
L F + V +LSGG+ +R+ A++ + N L+LDEPTN
Sbjct: 393 LKKFLFKPNQMKCLVKNLSGGECNRLLLAKLFLKPSNVLILDEPTN 438
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 292 ILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVD 351
IL N L + RI ++G NGAGK+TLLK+I G+ +N+K Y Q +
Sbjct: 18 ILKNAVLYINKKERISLIGKNGAGKSTLLKVINKNQELDHGSIIYQKNIKISYLKQDNPK 77
Query: 352 QLDMNLRCVQLLEAAFPGKPQEEY--------RRQLGGFGVSGDLALQFVGSLSGGQKSR 403
LD+++ ++ + +E ++ + F + + LSGG +
Sbjct: 78 NLDISI--YDFIKNQLKKENNKEININTIVEIKKIIKTFQIDKH---SLLSELSGGSLRK 132
Query: 404 VAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAINKYT 442
V ++ P+ L+LDEPTNHLDI TI L K + K++
Sbjct: 133 VVLGSALLSQPDVLLLDEPTNHLDINTIAWLEKFLKKFS 171
>sp|P25256|TLRC_STRFR Tylosin resistance ATP-binding protein TlrC OS=Streptomyces fradiae
GN=tlrC PE=3 SV=1
Length = 548
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 163/398 (40%), Gaps = 63/398 (15%)
Query: 98 TELTQVFAELEAIEADKAPARASVILAGLGFTPEMQKRATKHFSGGWRKM---------- 147
T ++ + E + A AR L GLG + R SGG R
Sbjct: 127 TAYARLTEQYEVRDGYGADARVDAALHGLGLPGLPRDRRLGTLSGGERSRLALAATLASQ 186
Query: 148 ----------------AIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTY 191
A+ WLE +L T++ V+HDR FLD + + + + + +
Sbjct: 187 PELLLLDEPTNDLDDRAVHWLEEHLSGHRGTVVTVTHDRVFLDRLTATVLEVDGRGVSRH 246
Query: 192 RGNY---------------EAFDKIKTEKLKNQQREIEAQRMHREHVQKFID--TFRYNA 234
Y + +D+ + E L +R EA + + + + F + A
Sbjct: 247 GDGYAGYLAAKAAERRRRQQQYDEWRAE-LDRNRRLAEANVARLDGIPRKMGKAAFGHGA 305
Query: 235 NRA--------SSVQSKIKQLERLPE--LKPIEKEVEVVLKFPDTELLSPPILQLSEVNF 284
RA S V++ +++ERL + P + + + + P +E++
Sbjct: 306 FRARGRDHGAMSRVRNAKERVERLTANPVAPPADRLSLTARIATAD--GPGEAPAAELDG 363
Query: 285 EYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGY 344
V + + + LGA R+ I G NGAGK+TLL ++ G +SP AG +V + G+
Sbjct: 364 VVVGSRLRVPKLRLGAA--ERLLITGPNGAGKSTLLSVLAGELSPDAGAVSVPG--RVGH 419
Query: 345 FSQHHVDQLDMNLRCVQLLEAAFPGKPQEEYRRQLGGFGVSGDLALQF-VGSLSGGQKSR 403
Q L ++ PG E+ R+L G+ AL+ VG LS GQ+ R
Sbjct: 420 LRQEET-PWPAKLTVLEAFAHNRPGDRDEQADRRLS-LGLFEPEALRLRVGELSYGQRRR 477
Query: 404 VAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAINKY 441
+ AR+ L+LDEPTNHL +E L +A+ Y
Sbjct: 478 IELARLVSEPVGLLLLDEPTNHLSPALVEELEEALTGY 515
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 82/185 (44%), Gaps = 42/185 (22%)
Query: 292 ILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHH-- 349
+L+ V L + + I+GDNGAGK+TLL+++ G P AG TV GY Q
Sbjct: 23 VLSQVSLAISPGEKAGIIGDNGAGKSTLLRLLAGEERPDAGEVTVIAPGGVGYLPQTLGL 82
Query: 350 ------VDQLDMNLRCVQLLEAAFP----------------------GKPQEEYRRQLG- 380
D +D+ + +++LEA + E+Y + G
Sbjct: 83 PPRATVQDAIDLAMTELRVLEAELRRTEAALAEAATDEALQDALTAYARLTEQYEVRDGY 142
Query: 381 -----------GFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIE 429
G G+ G + +G+LSGG++SR+A A + P L+LDEPTN LD
Sbjct: 143 GADARVDAALHGLGLPGLPRDRRLGTLSGGERSRLALAATLASQPELLLLDEPTNDLDDR 202
Query: 430 TIEAL 434
+ L
Sbjct: 203 AVHWL 207
>sp|O93796|EF3_CANGA Elongation factor 3 OS=Candida glabrata (strain ATCC 2001 / CBS 138
/ JCM 3761 / NBRC 0622 / NRRL Y-65) GN=TEF3 PE=3 SV=2
Length = 1045
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 108/263 (41%), Gaps = 69/263 (26%)
Query: 123 LAGLGFTPEMQKRATKHFSGGWR-KMA-------------------------IIWLENYL 156
L GFT EM SGGW+ K+A + WL NYL
Sbjct: 527 LVEFGFTEEMINMPISSLSGGWKMKLALARAVLKNADILLLDEPTNHLDTVNVAWLVNYL 586
Query: 157 QNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNYEAFDKIKTEKLKNQQREIEAQ 216
T ++VSHD FLD+V I H ++ Y+GN F
Sbjct: 587 NTCGITSVIVSHDSGFLDNVCQYIIHYEGLKLRKYKGNLSEF------------------ 628
Query: 217 RMHREHVQKFIDTFRYNANRASSVQSKIKQLERLPELKPIEKEVEVVLKFPDTELLSPPI 276
V+K Y AS ++ K + L +K +K I
Sbjct: 629 ------VKKCPTAQSYYELGASDLEFKFPEPGYLEGVKTKQK----------------AI 666
Query: 277 LQLSEVNFEYVPG--KPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTR 334
+++S + F+Y PG KP ++++ +L SRI ++G NGAGK+TL+ ++ G + PT+G
Sbjct: 667 VKVSNMTFQY-PGTSKPQISDISFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEV 725
Query: 335 TVHRNLKFGYFSQHHVDQLDMNL 357
H N + Y QH ++ +L
Sbjct: 726 YTHENCRIAYIKQHAFAHIESHL 748
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLE 364
R + G NGAGK+TL++ I G T + + +H +D + + +
Sbjct: 458 RYGLCGPNGAGKSTLMRAIAN--GQVDGFPTPEECMTV--YVEHDIDGTHADTSVLDFVV 513
Query: 365 AAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTN 424
++ G +E +L FG + ++ + SLSGG K ++A AR + + L+LDEPTN
Sbjct: 514 SSEVGT-KEAITAKLVEFGFTEEMINMPISSLSGGWKMKLALARAVLKNADILLLDEPTN 572
Query: 425 HLDIETIEALGKAIN 439
HLD + L +N
Sbjct: 573 HLDTVNVAWLVNYLN 587
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 393 VGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAINKY 441
+ LSGGQK ++ A P+ +VLDEPTN+LD +++ AL KA+ +
Sbjct: 894 IRGLSGGQKVKLVLAACSWQRPHLIVLDEPTNYLDRDSLGALSKALKAF 942
>sp|P12622|CHVD_RHIRD ATP-binding protein ChvD (Fragment) OS=Rhizobium radiobacter
GN=chvD PE=3 SV=1
Length = 286
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 102/198 (51%), Gaps = 3/198 (1%)
Query: 149 IIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTYRGNYEAFDKIKTEKLKN 208
I WLE +L+++P +++++HDR+FLD+V I L R Y GNY A+ + K ++++
Sbjct: 92 IAWLEKHLRDYPGAVMMITHDRYFLDNVTGWILELDRGRGIPYEGNYSAYLQAKAKRMQQ 151
Query: 209 QQREIEAQRMHREHVQKFIDTFRYNANRASSVQSKIKQLERLPELKPIEKEVEVVLKFPD 268
+ RE +++ Q++I + R + +++I++ + L E + + + P
Sbjct: 152 EAREDASRQKAISREQEWIASS--PKARQTKSKARIRRYDELVEAAENRRPGDAQIVIPV 209
Query: 269 TELLSPPILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIIS 328
E L +++ + Y + ++ N+ + ++G NGAGKTTL ++I G
Sbjct: 210 AERLGRVVIEAENLTKSY-GDRVLIENLTFKLPPGGIVGVIGPNGAGKTTLFRMITGQEQ 268
Query: 329 PTAGTRTVHRNLKFGYFS 346
P +G+ TV + GY
Sbjct: 269 PDSGSVTVGETVHLGYVD 286
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
Query: 386 GDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAINKY 441
GD A V LSGG++ RVA ++ ++ P+ L+LDEPTNHLD ETI L K + Y
Sbjct: 50 GDSA---VTGLSGGERRRVALCKLLLSQPDLLLLDEPTNHLDAETIAWLEKHLRDY 102
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 160,067,695
Number of Sequences: 539616
Number of extensions: 6752485
Number of successful extensions: 34712
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3542
Number of HSP's successfully gapped in prelim test: 217
Number of HSP's that attempted gapping in prelim test: 26036
Number of HSP's gapped (non-prelim): 7238
length of query: 443
length of database: 191,569,459
effective HSP length: 121
effective length of query: 322
effective length of database: 126,275,923
effective search space: 40660847206
effective search space used: 40660847206
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)