RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy208
(443 letters)
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 101 bits (254), Expect = 4e-25
Identities = 40/191 (20%), Positives = 80/191 (41%), Gaps = 12/191 (6%)
Query: 257 EKEVEVVLKFPDTELLSPPILQLSEVNFEYV--PGKPILTNVCLGATLESRICIVGDNGA 314
E E++ K + + V+F ++ G P+L N+ L + I G G+
Sbjct: 14 EGFGELLEKVQQSNGDRKHSSDENNVSFSHLCLVGNPVLKNINLNIEKGEMLAITGSTGS 73
Query: 315 GKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFPGKPQEE 374
GKT+LL +I+G + + G + + + + SQ + ++ + ++ +
Sbjct: 74 GKTSLLMLILGELEASEG--IIKHSGRVSFCSQFSWI-MPGTIKENIIFGVSYDEYRYKS 130
Query: 375 YRRQLGGFGVSGDLALQF-------VGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLD 427
+ A Q +LSGGQ++R++ AR + +LD P +LD
Sbjct: 131 VVKACQLQQDITKFAEQDNTVLGEGGVTLSGGQRARISLARAVYKDADLYLLDSPFGYLD 190
Query: 428 IETIEALGKAI 438
+ T E + ++
Sbjct: 191 VFTEEQVFESC 201
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 200
Score = 93.8 bits (233), Expect = 6e-23
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 12/173 (6%)
Query: 276 ILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTA---- 331
L++ +++ Y KP+L + + + + G NG GKTTLLK I + P
Sbjct: 2 KLEIRDLSVGY--DKPVLERITMTIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEII 59
Query: 332 --GTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFPGKP--QEEYRRQLGGFGVSGD 387
G K + + + +++ A+ G + E L V
Sbjct: 60 YNGVPITKVKGKIFFLPEEIIVPRKISVEDYLKAVASLYGVKVNKNEIMDALESVEVLDL 119
Query: 388 LALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAINK 440
+ +G LS G RV A + VLD+P +D ++ + K+I +
Sbjct: 120 K--KKLGELSQGTIRRVQLASTLLVNAEIYVLDDPVVAIDEDSKHKVLKSILE 170
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 91.5 bits (227), Expect = 9e-22
Identities = 45/190 (23%), Positives = 70/190 (36%), Gaps = 43/190 (22%)
Query: 276 ILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGT-- 333
+L V+F Y + IL ++ A S I G +G GK+T+ ++ PTAG
Sbjct: 1 MLSARHVDFAYDDSEQILRDISFEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGEIT 60
Query: 334 -----------------------------RTVHRNLKFGYFSQHHVDQLDMNLRCVQLLE 364
T+ NL +G + + L L
Sbjct: 61 IDGQPIDNISLENWRSQIGFVSQDSAIMAGTIRENLTYGLEGDYTDEDLWQVLDLAFARS 120
Query: 365 AAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTN 424
F ++ ++G GV +SGGQ+ R+A AR + P L+LDE T
Sbjct: 121 --FVENMPDQLNTEVGERGV----------KISGGQRQRLAIARAFLRNPKILMLDEATA 168
Query: 425 HLDIETIEAL 434
LD E+ +
Sbjct: 169 SLDSESESMV 178
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga
maritima [TaxId: 2336]}
Length = 238
Score = 88.1 bits (218), Expect = 2e-20
Identities = 42/166 (25%), Positives = 62/166 (37%), Gaps = 15/166 (9%)
Query: 289 GKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTV----------HR 338
K IL + ++G NGAGKTT L+II +I P++G TV
Sbjct: 14 KKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGKNVVEEPHEV 73
Query: 339 NLKFGYFSQHHVDQLDMNLRCVQLLEAAFPGKPQEEYR----RQLGGFGVSGDLALQFVG 394
Y + +M A F E R G+ G+ V
Sbjct: 74 RKLISYLPEEAGAYRNMQGIEYLRFVAGFYASSSSEIEEMVERATEIAGL-GEKIKDRVS 132
Query: 395 SLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAINK 440
+ S G ++ AR M P +LDEPT+ LD+ + K + +
Sbjct: 133 TYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQ 178
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 87.2 bits (216), Expect = 2e-20
Identities = 49/190 (25%), Positives = 75/190 (39%), Gaps = 25/190 (13%)
Query: 276 ILQLSEVNFEYVPGK---PILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAG 332
+++L V Y G+ L NV L + I+G +G+GK+T+L II + PT G
Sbjct: 1 MIKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEG 60
Query: 333 T---------------RTVHRNLKFGYFSQHHVDQLDMNLR---CVQLLEAAFPGKPQEE 374
T R K G+ Q + + L+ EE
Sbjct: 61 EVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEE 120
Query: 375 YRRQL----GGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIET 430
R++ + A LSGGQ+ RVA AR P ++ D+PT LD +T
Sbjct: 121 RRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKT 180
Query: 431 IEALGKAINK 440
E + + + K
Sbjct: 181 GEKIMQLLKK 190
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal
domain {Pyrococcus horikoshii [TaxId: 53953]}
Length = 239
Score = 87.5 bits (217), Expect = 2e-20
Identities = 38/179 (21%), Positives = 76/179 (42%), Gaps = 19/179 (10%)
Query: 277 LQLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTV 336
++L + + + + L + ++G +G GKTT L++I G+ PT G
Sbjct: 7 VKLENLTKRF-GNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYF 65
Query: 337 H---------RNLKFGYFSQHHVDQLDMNLRCVQLLE--AAFPGKPQEEYRRQ----LGG 381
++ Q + + ++ + + P++E ++
Sbjct: 66 GDRDVTYLPPKDRNISMVFQSY--AVWPHMTVYENIAFPLKIKKFPKDEIDKRVRWAAEL 123
Query: 382 FGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAINK 440
+ +L ++ LSGGQ+ RVA AR + P+ L++DEP ++LD + A+ I K
Sbjct: 124 LQIE-ELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKK 181
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 87.3 bits (216), Expect = 3e-20
Identities = 40/184 (21%), Positives = 73/184 (39%), Gaps = 18/184 (9%)
Query: 273 SPPILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAG 332
S +L++ ++ Y + + L + ++G NGAGKTT L I G++ G
Sbjct: 3 SDIVLEVQSLHVYY-GAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKG 61
Query: 333 T------------RTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFPGKPQEEYRRQ-- 378
V + + ++ + L+ A+ K +E +R
Sbjct: 62 KIIFNGQDITNKPAHVINRMGIALVPEGRRIFPELTVY-ENLMMGAYNRKDKEGIKRDLE 120
Query: 379 --LGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGK 436
F + Q G+LSGG++ +A R M+ P L++DEP+ L + + +
Sbjct: 121 WIFSLFPRLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFE 180
Query: 437 AINK 440
I K
Sbjct: 181 VIQK 184
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 87.5 bits (217), Expect = 3e-20
Identities = 45/196 (22%), Positives = 78/196 (39%), Gaps = 45/196 (22%)
Query: 277 LQLSEVNFEYVPG-KPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGT-- 333
+ + V+F+Y PIL ++ L + VG +G GK+TL+ +I T+G
Sbjct: 17 IDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQIL 76
Query: 334 -----------------------------RTVHRNLKFGYFSQHHVDQLDMNLRCVQLLE 364
TV N+ G +++ + +
Sbjct: 77 IDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLG-RPTATDEEVVEAAKMANAHD 135
Query: 365 AAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTN 424
F + Y ++G GV LSGGQK R++ AR+ + P L+LDE T+
Sbjct: 136 --FIMNLPQGYDTEVGERGV----------KLSGGQKQRLSIARIFLNNPPILILDEATS 183
Query: 425 HLDIETIEALGKAINK 440
LD+E+ + +A++
Sbjct: 184 ALDLESESIIQEALDV 199
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter
MsbA, C-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 253
Score = 85.7 bits (212), Expect = 1e-19
Identities = 45/196 (22%), Positives = 74/196 (37%), Gaps = 44/196 (22%)
Query: 277 LQLSEVNFEYVPG-KPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGT-- 333
L+ V F Y P L N+ L + +VG +G+GK+T+ +I G
Sbjct: 14 LEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHIL 73
Query: 334 -----------------------------RTVHRNLKFGYFSQHHVDQLDMNLRCVQLLE 364
TV N+ + ++ +Q++ R ++
Sbjct: 74 MDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMD 133
Query: 365 AAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTN 424
F K +G GV LSGGQ+ R+A AR + L+LDE T+
Sbjct: 134 --FINKMDNGLDTIIGENGV----------LLSGGQRQRIAIARALLRDSPILILDEATS 181
Query: 425 HLDIETIEALGKAINK 440
LD E+ A+ A+++
Sbjct: 182 ALDTESERAIQAALDE 197
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 84.3 bits (208), Expect = 4e-19
Identities = 37/193 (19%), Positives = 59/193 (30%), Gaps = 29/193 (15%)
Query: 276 ILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRT 335
IL+ + + L V + I+G NG+GK+TL+ +I G + G
Sbjct: 4 ILRTENIVKYF-GEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVY 62
Query: 336 VH------------RNLKFGYFSQHHVDQLDMN----------LRCVQLLEAAFPGKP-- 371
+ Q +M L + F K
Sbjct: 63 FENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEICPGESPLNSLFYKKWIP 122
Query: 372 ----QEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLD 427
E ++ F L + G LSGGQ V R M P +V+DEP +
Sbjct: 123 KEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVA 182
Query: 428 IETIEALGKAINK 440
+ + +
Sbjct: 183 PGLAHDIFNHVLE 195
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 82.6 bits (204), Expect = 2e-18
Identities = 46/188 (24%), Positives = 73/188 (38%), Gaps = 30/188 (15%)
Query: 276 ILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRT 335
L + +++ Y G +L V L A I I+G +G+GK+T L+ I + P+ G
Sbjct: 2 KLHVIDLHKRY-GGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAII 60
Query: 336 VH------------------------RNLKFGYFSQHHVDQLDMN-LRCVQLLEAAFPGK 370
V+ + QH M L V G
Sbjct: 61 VNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGL 120
Query: 371 PQEEYRRQ----LGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHL 426
+ + R + L G+ ++ LSGGQ+ RV+ AR P+ L+ DEPT+ L
Sbjct: 121 SKHDARERALKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSAL 180
Query: 427 DIETIEAL 434
D E + +
Sbjct: 181 DPELVGEV 188
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 80.0 bits (197), Expect = 1e-17
Identities = 47/182 (25%), Positives = 70/182 (38%), Gaps = 19/182 (10%)
Query: 278 QLSEVNFEYVPG-KPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGT--- 333
+ F Y P IL N+ L I IVG +G+GK+TL K+I P G
Sbjct: 3 TFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLI 62
Query: 334 -----RTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFPGKPQEEYRRQLGGFGVSGDL 388
N D + +N + + A PG E+ G +
Sbjct: 63 DGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFI 122
Query: 389 ALQFVG----------SLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALGKAI 438
+ G LSGGQ+ R+A AR + P L+ DE T+ LD E+ + + +
Sbjct: 123 SELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNM 182
Query: 439 NK 440
+K
Sbjct: 183 HK 184
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 77.3 bits (190), Expect = 6e-17
Identities = 44/185 (23%), Positives = 67/185 (36%), Gaps = 30/185 (16%)
Query: 276 ILQLSEVNFEYVPGKPILTNVCLGATLES--RICIVGDNGAGKTTLLKIIMGIISPTAGT 333
++QL +V L + + + + +VG NGAGK+TLL + G+ G+
Sbjct: 3 VMQLQDVAE-----STRLGPLSG--EVRAGEILHLVGPNGAGKSTLLARMAGMT-SGKGS 54
Query: 334 RTVH-----------RNLKFGYFSQHHVDQLDMNLRCVQLLEAAFPGKPQEEYRRQLGGF 382
L Y SQ + L K + E + G
Sbjct: 55 IQFAGQPLEAWSATKLALHRAYLSQQQTPPFATPVW--HYLTLHQHDKTRTELLNDVAGA 112
Query: 383 GVSGDLALQFVGSLSGGQKSRVAFARMCMA-------APNFLVLDEPTNHLDIETIEALG 435
D + LSGG+ RV A + + A L+LDEP N LD+ AL
Sbjct: 113 LALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDVAQQSALD 172
Query: 436 KAINK 440
K ++
Sbjct: 173 KILSA 177
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 76.1 bits (187), Expect = 2e-16
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 22/180 (12%)
Query: 276 ILQLSEVNFEYVPGK---PILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAG 332
+++LS + + G L NV L ++G +GAGK+TL++ + + PT G
Sbjct: 1 MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEG 60
Query: 333 TRTVH-RNL-------------KFGYFSQHHVDQLDMNLRCVQLLEAAFPGKPQEEYRRQ 378
+ V + L + G QH + L P++E +R+
Sbjct: 61 SVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRR 120
Query: 379 ----LGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEAL 434
L G+ GD + +LSGGQK RVA AR + P L+ DE T+ LD T ++
Sbjct: 121 VTELLSLVGL-GDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSI 179
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 75.8 bits (186), Expect = 2e-16
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 13/169 (7%)
Query: 278 QLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVH 337
QL V + + ++ L + VG +G GK+TLL++I G+ + T+G +
Sbjct: 2 QLQNVTKAW-GEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIG 60
Query: 338 ---------RNLKFGYFSQHHVDQLDMNLRCVQLLEAAFPGKPQEEYRR---QLGGFGVS 385
G Q + +++ G +E + Q+
Sbjct: 61 EKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQL 120
Query: 386 GDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEAL 434
L + +LSGGQ+ RVA R +A P+ +LDEP ++LD +
Sbjct: 121 AHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQM 169
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 76.1 bits (187), Expect = 2e-16
Identities = 37/178 (20%), Positives = 72/178 (40%), Gaps = 21/178 (11%)
Query: 276 ILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRT 335
++L +V + + + L + ++G +G GKTT L++I G+ P+ G
Sbjct: 3 GVRLVDVWKVF-GEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIY 61
Query: 336 V----HRNLKFGYFSQHHVDQLDMNLRCVQLLEAAFP-----------GKPQEEYRRQ-- 378
+ + + G F + M + L P++E ++
Sbjct: 62 IGDKLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRVR 121
Query: 379 --LGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEAL 434
G++ +L + LSGGQ+ RVA R + P ++DEP ++LD + +
Sbjct: 122 EVAELLGLT-ELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRM 178
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 74.9 bits (184), Expect = 6e-16
Identities = 36/185 (19%), Positives = 66/185 (35%), Gaps = 21/185 (11%)
Query: 277 LQLSEVNFEY--VPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTR 334
+Q +V+F Y P +L + +VG NG+GK+T+ ++ + PT G
Sbjct: 12 VQFQDVSFAYPNRPDVLVLQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQL 71
Query: 335 TV-----------HRNLKFGYFSQHHV---DQLDMNLRCVQLLEAAFPGKPQEEYRRQLG 380
+ + + + Q L N+ + +
Sbjct: 72 LLDGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQENIAYGLTQKPTMEEITAAAVKSGAH 131
Query: 381 GF-----GVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEALG 435
F + LSGGQ+ VA AR + P L+LD+ T+ LD + +
Sbjct: 132 SFISGLPQGYDTEVDEAGSQLSGGQRQAVALARALIRKPCVLILDDATSALDANSQLQVE 191
Query: 436 KAINK 440
+ + +
Sbjct: 192 QLLYE 196
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 72.4 bits (177), Expect = 4e-15
Identities = 42/176 (23%), Positives = 69/176 (39%), Gaps = 18/176 (10%)
Query: 277 LQLSEVNFEYVPGK-PILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRT 335
+ + V+ + GK L NV + R I+G +GAGKTT ++II G+ P+ G
Sbjct: 4 IIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELY 63
Query: 336 VH--------------RNLKFGYFSQHHVDQLDMNLR---CVQLLEAAFPGKPQEEYRRQ 378
+ K G Q ++ L + + +
Sbjct: 64 FDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEE 123
Query: 379 LGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEAL 434
+ + F LSG Q+ RVA AR + P+ L+LDEP ++LD ++
Sbjct: 124 VAKILDIHHVLNHFPRELSGAQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSA 179
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding
protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId:
2234]}
Length = 240
Score = 72.4 bits (177), Expect = 4e-15
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 306 ICIVGDNGAGKTTLLKIIMGIISPTAGTRTVH---------RNLKFGYFSQHHVDQLDMN 356
++G GAGK+ L++I GI+ P G ++ G+ Q + L +
Sbjct: 27 CVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFVPQDY--ALFPH 84
Query: 357 LRCVQLLEAAFPGKPQEEYR---RQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAA 413
L + + + E R++ L + LSGG++ RVA AR +
Sbjct: 85 LSVYRNIAYGLRNVERVERDRRVREMAEKLGIAHLLDRKPARLSGGERQRVALARALVIQ 144
Query: 414 PNFLVLDEPTNHLDIETIEAL 434
P L+LDEP + +D++T L
Sbjct: 145 PRLLLLDEPLSAVDLKTKGVL 165
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 71.2 bits (174), Expect = 9e-15
Identities = 38/168 (22%), Positives = 65/168 (38%), Gaps = 11/168 (6%)
Query: 276 ILQLSEVNFEYVPGKPILTNVCLGATLESRICIVGDNGAGKTTLLKIIMGIISPTAGTRT 335
++++ ++ ++ L N+ L I+G GAGKT L++I G P +G
Sbjct: 1 MIEIESLSRKW--KNFSLDNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRIL 58
Query: 336 VH---------RNLKFGYFSQHHVDQLDMNLRCVQLLEAAFPGKPQEEYRRQLGGFGVSG 386
+ + Q++ MN++ +
Sbjct: 59 LDGKDVTDLSPEKHDIAFVYQNYSLFPHMNVKKNLEFGMRMKKIKDPKRVLDTARDLKIE 118
Query: 387 DLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTNHLDIETIEAL 434
L + +LSGG++ RVA AR + P L+LDEP + LD T E
Sbjct: 119 HLLDRNPLTLSGGEQQRVALARALVTNPKILLLDEPLSALDPRTQENA 166
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 65.0 bits (157), Expect = 5e-13
Identities = 17/122 (13%), Positives = 29/122 (23%), Gaps = 11/122 (9%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLE 364
+I I G+ G GKTTL+K I+ + A + + +
Sbjct: 2 KIIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSS 61
Query: 365 AAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSGGQKSRVAFARMCMAAPNFLVLDEPTN 424
F K A+ +++DE
Sbjct: 62 KFFTSKKLVGSYG-----------VNVQYFEELAIPILERAYREAKKDRRKVIIIDEIGK 110
Query: 425 HL 426
Sbjct: 111 ME 112
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 46.3 bits (108), Expect = 3e-06
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 405 AFARMCMAAPNFLVLDEPTNHLDIETIEALGKAINKY 441
A + + L+LDEPT +LD E L + +Y
Sbjct: 217 AMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERY 253
Score = 42.4 bits (98), Expect = 6e-05
Identities = 10/54 (18%), Positives = 22/54 (40%)
Query: 306 ICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRC 359
I+G NG+GK++LL I+ + + + ++ ++ L
Sbjct: 26 NLIIGQNGSGKSSLLDAILVGLYWPLRIKDIKKDEFTKVGARDTYIDLIFEKDG 79
Score = 28.2 bits (61), Expect = 1.8
Identities = 6/30 (20%), Positives = 12/30 (40%), Gaps = 3/30 (10%)
Query: 148 AIIWLENYLQNWP---TTLLVVSHDRHFLD 174
L ++ + +++VSHD D
Sbjct: 242 RRRKLITIMERYLKKIPQVILVSHDEELKD 271
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 46.0 bits (107), Expect = 5e-06
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Query: 391 QFVGSLSGGQKSRV------AFARMCMAAPNFLVLDEPTNHLDIETIEALGKAINKY 441
+ + LSGG++ + A + + L+LDEPT +LD E L + +Y
Sbjct: 274 RPLTFLSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERY 330
Score = 34.8 bits (78), Expect = 0.020
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 307 CIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRN 339
I+G NG+GK++LL I+ + + + ++
Sbjct: 27 LIIGQNGSGKSSLLDAILVGLYWPLRIKDIKKD 59
Score = 26.3 bits (56), Expect = 9.4
Identities = 6/29 (20%), Positives = 13/29 (44%), Gaps = 3/29 (10%)
Query: 151 WLENYLQNWP---TTLLVVSHDRHFLDSV 176
L ++ + +++VSHD D+
Sbjct: 322 KLITIMERYLKKIPQVILVSHDEELKDAA 350
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 41.2 bits (95), Expect = 6e-05
Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Query: 305 RICIVGDNGAGKTTLLKIIMG----IISPTAGTRTVHRNLKFGYFSQHHVDQ 352
++ +G + AGKTTLL ++ + PT + + F+ +
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGG 53
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 39.9 bits (92), Expect = 2e-04
Identities = 12/57 (21%), Positives = 23/57 (40%)
Query: 303 ESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRC 359
E ++ ++G +GK+T++K + I G H K +F V +
Sbjct: 2 EVKLLLLGAGESGKSTIVKQMKIIHEAGTGIVETHFTFKDLHFKMFDVGGQRSERKK 58
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 37.8 bits (87), Expect = 0.001
Identities = 8/38 (21%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 305 RICIVGDNGAGKTTLLK-IIMGIISPTAGTRTVHRNLK 341
R+ ++G +GK+T++K + + + T+G +
Sbjct: 8 RLLLLGAGESGKSTIVKQMRILHVVLTSGIFETKFQVD 45
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 36.2 bits (82), Expect = 0.003
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 4/63 (6%)
Query: 301 TLESRICIVGDNGAGKTTLLKIIMG----IISPTAGTRTVHRNLKFGYFSQHHVDQLDMN 356
T E RI I+G +GAGKTT+L + PT G K F + L
Sbjct: 3 TREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGLTSI 62
Query: 357 LRC 359
Sbjct: 63 RPY 65
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 35.8 bits (81), Expect = 0.004
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 303 ESRICIVGDNGAGKTTLLKIIMG----IISPTAGTRTVHRNLKFGYFSQHH 349
E R+ ++G + AGKTT+LK G ISPT G + +
Sbjct: 2 ELRLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIWD 52
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 35.6 bits (81), Expect = 0.005
Identities = 16/75 (21%), Positives = 25/75 (33%), Gaps = 4/75 (5%)
Query: 305 RICIVGDNGAGKTTLLKIIMG--IISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQL 362
++ +GD+G GKTT L T + K ++ + V L
Sbjct: 7 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 66
Query: 363 LEAAFPGKPQEEYRR 377
G QE +R
Sbjct: 67 QLWDTAG--QERFRS 79
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 35.7 bits (81), Expect = 0.006
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 303 ESRICIVGDNGAGKTTLLKIIMGI---ISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRC 359
E ++ ++G +GK+T +K + I PT G +L+ F V R
Sbjct: 2 ELKLLLLGTGESGKSTFIKQMRIIHGSGVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRK 61
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 35.1 bits (79), Expect = 0.009
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 303 ESRICIVGDNGAGKTTLLKIIMG 325
++ +G + AGKTTLL ++
Sbjct: 13 TGKLVFLGLDNAGKTTLLHMLKD 35
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 34.9 bits (79), Expect = 0.011
Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Query: 305 RICIVGDNGAGKTTLLKIIMGI--ISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRC 359
+I ++G +GK+T LK + I PT G +K F V +
Sbjct: 4 KILLLGAGESGKSTFLKQMRIIHGQDPTKGIHEYDFEIKNVPFKMVDVGGQRSERKR 60
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 34.6 bits (78), Expect = 0.013
Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Query: 303 ESRICIVGDNGAGKTTLLKIIMG----IISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLR 358
E ++ IVG + AGKTT+L SPT G+ + F + +
Sbjct: 15 EHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRS 74
Query: 359 CVQ 361
Sbjct: 75 SWN 77
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 33.9 bits (76), Expect = 0.016
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 303 ESRICIVGDNGAGKTTLLKIIMG 325
E + +VG +GKTT + +I
Sbjct: 2 EMELTLVGLQYSGKTTFVNVIAS 24
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 34.0 bits (76), Expect = 0.017
Identities = 9/60 (15%), Positives = 19/60 (31%), Gaps = 4/60 (6%)
Query: 304 SRICIVGDNGAGKTTLLKIIMG----IISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRC 359
+ + IVG GK+TL ++ I+ G ++ + +
Sbjct: 1 ATVLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFD 60
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 34.2 bits (77), Expect = 0.017
Identities = 11/48 (22%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Query: 303 ESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHV 350
+ I I G +GKT+LL ++ T L + V
Sbjct: 3 QPSIIIAGPQNSGKTSLLTLLTT--DSVRPTVVSQEPLSAADYDGSGV 48
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 33.5 bits (75), Expect = 0.020
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 305 RICIVGDNGAGKTTLL-KIIMGIISPTAGTRTVHR 338
RI +VG + AGKTT+L K+ +G I T T +
Sbjct: 2 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV 36
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 33.8 bits (76), Expect = 0.022
Identities = 7/58 (12%), Positives = 17/58 (29%), Gaps = 4/58 (6%)
Query: 306 ICIVGDNGAGKTTLLKIIMG----IISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRC 359
+ VG +GKT L ++ + + + + + L +
Sbjct: 3 VLFVGLCDSGKTLLFVRLLTGQYRDTQTSITDSSAIYKVNNNRGNSLTLIDLPGHESL 60
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 33.6 bits (75), Expect = 0.022
Identities = 15/58 (25%), Positives = 20/58 (34%), Gaps = 4/58 (6%)
Query: 306 ICIVGDNGAGKTTLLKIIMG----IISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRC 359
+ IVG GK+TLL ++G ISP T + V L
Sbjct: 8 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHK 65
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 33.3 bits (75), Expect = 0.026
Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 10/73 (13%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLE 364
++ ++GD+G GK+ LL + G Q+D Q+ +
Sbjct: 6 KVVLIGDSGVGKSNLLSRFTR------NEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 59
Query: 365 AAFPGKPQEEYRR 377
A QE YRR
Sbjct: 60 TA----GQERYRR 68
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 33.4 bits (75), Expect = 0.028
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 303 ESRICIVGDNGAGKTTLLKIIMG----IISPTAGTRTVHRNLK 341
E RI I+G +GAGKTT+L + PT G + K
Sbjct: 17 ELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSYK 59
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 33.4 bits (75), Expect = 0.029
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 303 ESRICIVGDNGAGKTTLLKIIMG 325
E RI ++G + AGKTTLLK +
Sbjct: 16 EVRILLLGLDNAGKTTLLKQLAS 38
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 33.0 bits (74), Expect = 0.031
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 303 ESRICIVGDNGAGKTTLLKIIMGIISPT 330
E RI ++G + AGKTT+L + S T
Sbjct: 12 EMRILMLGLDAAGKTTILYKLKLGQSVT 39
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 33.1 bits (74), Expect = 0.033
Identities = 14/58 (24%), Positives = 20/58 (34%)
Query: 302 LESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRC 359
+ ++ IVGD GKT LL + P TV N +L +
Sbjct: 1 IRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 58
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 33.1 bits (74), Expect = 0.035
Identities = 9/57 (15%), Positives = 19/57 (33%)
Query: 303 ESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRC 359
E ++ I G G GK+ L+ + T+ + V +++
Sbjct: 2 EVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTA 58
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 32.8 bits (73), Expect = 0.036
Identities = 8/45 (17%), Positives = 16/45 (35%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHH 349
++ ++G G GK+ L +I G+ H +
Sbjct: 3 KVLLLGAPGVGKSALARIFGGVEDGPEAEAAGHTYDRSIVVDGEE 47
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 32.9 bits (74), Expect = 0.037
Identities = 15/73 (20%), Positives = 26/73 (35%), Gaps = 10/73 (13%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLE 364
+I I+G++ GKT+ L + T G + + +Q+ +
Sbjct: 7 KILIIGNSSVGKTSFLFRYAD------DSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWD 60
Query: 365 AAFPGKPQEEYRR 377
A QE YR
Sbjct: 61 TA----GQERYRT 69
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 32.9 bits (74), Expect = 0.038
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 10/73 (13%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLE 364
+I I+G++G GK++LL T G + +D N + + +
Sbjct: 9 KILIIGESGVGKSSLLLRFTD------DTFDPELAATIGVDFKVKTISVDGNKAKLAIWD 62
Query: 365 AAFPGKPQEEYRR 377
A QE +R
Sbjct: 63 TA----GQERFRT 71
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 32.4 bits (73), Expect = 0.046
Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLE 364
+I ++GD+G GK+ LL + + T+ + F VD ++ +Q+ +
Sbjct: 4 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGID-----FKIKTVDINGKKVK-LQIWD 57
Query: 365 AAFPGKPQEEYRR 377
A QE +R
Sbjct: 58 TAG----QERFRT 66
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 32.5 bits (73), Expect = 0.047
Identities = 13/72 (18%), Positives = 27/72 (37%), Gaps = 10/72 (13%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLE 364
+ I+GD G GK+ LL + + + ++++ + ++L
Sbjct: 6 KYIIIGDMGVGKSCLLHQFT--------EKKFMADCPHTIGVEFGTRIIEVSGQKIKLQI 57
Query: 365 AAFPGKPQEEYR 376
G QE +R
Sbjct: 58 WDTAG--QERFR 67
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 427
Score = 33.5 bits (75), Expect = 0.050
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Query: 397 SGGQKSRVAFARM-----CMAAPNFLVLDEPTNHLDIETIEALGKAINKY 441
SGG+K+ A A + +P F VLDE LDI ++ + I ++
Sbjct: 334 SGGEKTVAALALLFAINSYQPSP-FFVLDEVDAALDITNVQRIAAYIRRH 382
Score = 30.1 bits (66), Expect = 0.53
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 307 CIVGDNGAGKTTLL 320
I+G NG+GK+ ++
Sbjct: 29 SIIGPNGSGKSNMM 42
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 32.5 bits (73), Expect = 0.051
Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 10/73 (13%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLE 364
+I ++G+ G GKT L++ + +++N V+L
Sbjct: 7 KIVLIGNAGVGKTCLVRRFT--------QGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 58
Query: 365 AAFPGKPQEEYRR 377
G QE +R
Sbjct: 59 WDTAG--QERFRS 69
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal
domain {Methanococcus maripaludis [TaxId: 39152]}
Length = 179
Score = 32.4 bits (72), Expect = 0.060
Identities = 13/55 (23%), Positives = 19/55 (34%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRC 359
+ I G GKTTL K++ I S +A + + N R
Sbjct: 7 NLGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAFKLENYRI 61
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 32.4 bits (72), Expect = 0.064
Identities = 9/47 (19%), Positives = 14/47 (29%), Gaps = 4/47 (8%)
Query: 306 ICIVGDNGAGKTTLLKIIMG---IISPTAGTRTVHRNLKFGYFSQHH 349
I G + GK+TL+ + G G T +
Sbjct: 3 IIFAGRSNVGKSTLIYRLTGKKVRRGKRPGV-TRKIIEIEWKNHKII 48
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 31.9 bits (71), Expect = 0.078
Identities = 14/57 (24%), Positives = 17/57 (29%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQ 361
+ +VGD GKT LL P TV N L + Q
Sbjct: 7 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQ 63
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 710
Score = 32.8 bits (74), Expect = 0.085
Identities = 13/62 (20%), Positives = 25/62 (40%)
Query: 306 ICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEA 365
I G++GAGKT K ++ ++ A + ++ +L+ L +
Sbjct: 94 ILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSFSYGELEKQLLQANPILE 153
Query: 366 AF 367
AF
Sbjct: 154 AF 155
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 32.1 bits (72), Expect = 0.090
Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 10/73 (13%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLE 364
++ ++G++G GK+ LL T+ + ++++ + V+L
Sbjct: 8 KLLLIGNSGVGKSCLLLRFSDDTYTNDYISTI--------GVDFKIKTVELDGKTVKLQI 59
Query: 365 AAFPGKPQEEYRR 377
G QE +R
Sbjct: 60 WDTAG--QERFRT 70
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 31.8 bits (71), Expect = 0.096
Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 10/72 (13%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLE 364
+ ++G+ G GK+ LL + N G + + +Q+ +
Sbjct: 7 KFLVIGNAGTGKSCLLHQFIE------KKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 60
Query: 365 AAFPGKPQEEYR 376
A QE +R
Sbjct: 61 TA----GQERFR 68
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 31.5 bits (70), Expect = 0.12
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 305 RICIVGDNGAGKTTLLK 321
++C++GD G GK++++
Sbjct: 6 KVCLLGDTGVGKSSIMW 22
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 31.6 bits (70), Expect = 0.12
Identities = 3/17 (17%), Positives = 12/17 (70%)
Query: 305 RICIVGDNGAGKTTLLK 321
++ ++G+ GK++++
Sbjct: 5 KLVLLGEAAVGKSSIVL 21
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId:
2336]}
Length = 308
Score = 31.9 bits (71), Expect = 0.12
Identities = 13/72 (18%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Query: 307 CIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLEAA 366
IVG NG+GK+ ++ I + + + R + + L L
Sbjct: 28 AIVGPNGSGKSNIIDAIKWVFGEQS--KKELRASEKFDMIFAGSENLPPAGSAYVELVFE 85
Query: 367 FPGKPQEEYRRQ 378
G+ R
Sbjct: 86 ENGEEITVAREL 97
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 31.6 bits (70), Expect = 0.12
Identities = 14/53 (26%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
Query: 306 ICIVGDNGAGKTTLLKIIMG----IISPTAGTRTVHRNLKFGYFSQHHVDQLD 354
I IVG GK+TLL ++G I S A T + +
Sbjct: 8 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDT 60
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 31.3 bits (69), Expect = 0.12
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 305 RICIVGDNGAGKTTLLKIIMG 325
++ I G AGK++LL + G
Sbjct: 3 KVVIAGRPNAGKSSLLNALAG 23
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 31.6 bits (70), Expect = 0.13
Identities = 10/56 (17%), Positives = 21/56 (37%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCV 360
++ I+GD+G GKT+L+ + T+ + + M +
Sbjct: 4 KVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDT 59
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 31.2 bits (69), Expect = 0.13
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 305 RICIVGDNGAGKTTLLK 321
+I ++GD+ GKT L
Sbjct: 4 KIIVIGDSNVGKTCLTY 20
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 31.3 bits (69), Expect = 0.15
Identities = 11/55 (20%), Positives = 20/55 (36%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRC 359
R+ ++G+ G GK+TL I G+ V + + + L
Sbjct: 5 RVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLD 59
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 31.5 bits (70), Expect = 0.15
Identities = 14/57 (24%), Positives = 18/57 (31%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQ 361
+ +VGD GKT LL P+ TV N L + Q
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 31.1 bits (69), Expect = 0.15
Identities = 5/17 (29%), Positives = 12/17 (70%)
Query: 305 RICIVGDNGAGKTTLLK 321
++ ++G+ GKT+L+
Sbjct: 5 KVVLLGEGCVGKTSLVL 21
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 31.0 bits (69), Expect = 0.15
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 305 RICIVGDNGAGKTTLLK 321
++ +VGD+G GKT LL
Sbjct: 8 KVMLVGDSGVGKTCLLV 24
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 30.8 bits (68), Expect = 0.16
Identities = 4/17 (23%), Positives = 13/17 (76%)
Query: 305 RICIVGDNGAGKTTLLK 321
++ +VG+ GK+++++
Sbjct: 4 KMVVVGNGAVGKSSMIQ 20
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 30.9 bits (68), Expect = 0.17
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 305 RICIVGDNGAGKTTLLK 321
+I I+G GK++L
Sbjct: 6 KIAILGYRSVGKSSLTI 22
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 30.8 bits (68), Expect = 0.17
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 305 RICIVGDNGAGKTTLLK 321
++ +VG G GK+ L
Sbjct: 8 KLVVVGGGGVGKSALTI 24
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 30.7 bits (68), Expect = 0.17
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 305 RICIVGDNGAGKTTLLK 321
++ +G+ GKT+L+
Sbjct: 2 KLVFLGEQSVGKTSLIT 18
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 30.9 bits (69), Expect = 0.17
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 305 RICIVGDNGAGKTTLLK 321
++ ++GD+G GKT +L
Sbjct: 8 KLLLIGDSGVGKTCVLF 24
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 31.2 bits (69), Expect = 0.17
Identities = 9/45 (20%), Positives = 18/45 (40%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHH 349
++ I+GD+G GKT+L+ + T+ +
Sbjct: 4 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDD 48
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 31.2 bits (69), Expect = 0.18
Identities = 13/45 (28%), Positives = 18/45 (40%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHH 349
+I +VGD+ GKT LL + P TV N +
Sbjct: 4 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQ 48
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 30.8 bits (68), Expect = 0.19
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 305 RICIVGDNGAGKTTLLK 321
++ +VGD G GKTT +K
Sbjct: 5 KLVLVGDGGTGKTTFVK 21
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 30.7 bits (68), Expect = 0.20
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 306 ICIVGDNGAGKTTLLKII 323
+ +G GKTTLLK +
Sbjct: 5 LAFAAWSGTGKTTLLKKL 22
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 30.7 bits (68), Expect = 0.20
Identities = 9/57 (15%), Positives = 20/57 (35%)
Query: 303 ESRICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRC 359
+ R+ + G G GK++L+ + + TV + + L +
Sbjct: 2 DYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTT 58
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 30.7 bits (68), Expect = 0.20
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 305 RICIVGDNGAGKTTLLK 321
++ +VG G GK+ L
Sbjct: 6 KVIMVGSGGVGKSALTL 22
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 30.7 bits (68), Expect = 0.20
Identities = 5/17 (29%), Positives = 10/17 (58%)
Query: 305 RICIVGDNGAGKTTLLK 321
++ ++G G GK+ L
Sbjct: 5 KVVVLGSGGVGKSALTV 21
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum
[TaxId: 44689]}
Length = 306
Score = 31.3 bits (70), Expect = 0.20
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRN 339
+I +VG +GK+++L+ I+G G+ V R
Sbjct: 26 QIVVVGSQSSGKSSVLENIVGRDFLPRGSGIVTRR 60
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 30.7 bits (68), Expect = 0.21
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 305 RICIVGDNGAGKTTLLKIIMG 325
R+ IVG GK+TLL ++
Sbjct: 2 RMVIVGKPNVGKSTLLNRLLN 22
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli
[TaxId: 562]}
Length = 222
Score = 30.8 bits (68), Expect = 0.23
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 303 ESRICIVGDNGAGKTTLLKIIM 324
E + G NGAGK+T + +
Sbjct: 24 ELVTTLSGGNGAGKSTTMAAFV 45
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 30.4 bits (67), Expect = 0.24
Identities = 4/17 (23%), Positives = 13/17 (76%)
Query: 305 RICIVGDNGAGKTTLLK 321
++ ++G++ GK++L+
Sbjct: 8 KLVLLGESAVGKSSLVL 24
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 30.9 bits (68), Expect = 0.24
Identities = 9/59 (15%), Positives = 19/59 (32%), Gaps = 4/59 (6%)
Query: 305 RICIVGDNGAGKTTLLKIIMG----IISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRC 359
I + G + GK++ + ++ + + +T N H VD
Sbjct: 25 EIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYGFAK 83
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 30.6 bits (68), Expect = 0.25
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 305 RICIVGDNGAGKTTLLK 321
+ I+GD G GK+ LL
Sbjct: 5 KYIIIGDTGVGKSCLLL 21
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 30.4 bits (67), Expect = 0.25
Identities = 9/49 (18%), Positives = 17/49 (34%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQL 353
+ +VG AGK++LL + A + G ++
Sbjct: 3 DVGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERF 51
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 30.3 bits (67), Expect = 0.27
Identities = 13/57 (22%), Positives = 17/57 (29%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQ 361
+ +VGD GKT LL P TV + L + Q
Sbjct: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQ 67
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 30.3 bits (67), Expect = 0.29
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Query: 304 SRICIVGDNGAGKTTLLKIIMG----IISPTAGTRTVH 337
+ + +VG GK+TLL ++ I T +
Sbjct: 2 ADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPN 39
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 30.3 bits (67), Expect = 0.29
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 303 ESRICIVGDNGAGKTTLLK 321
E ++ +VG G GK+ L
Sbjct: 3 EYKLVVVGAGGVGKSALTI 21
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 30.3 bits (67), Expect = 0.30
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 305 RICIVGDNGAGKTTLLK 321
++ ++GD G GK++L+
Sbjct: 8 KVILLGDGGVGKSSLMN 24
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 30.0 bits (66), Expect = 0.33
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 305 RICIVGDNGAGKTTLLK 321
++ +VGD G GK+ L
Sbjct: 6 KLVVVGDGGVGKSALTI 22
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 30.0 bits (66), Expect = 0.35
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 305 RICIVGDNGAGKTTLLKIIMG 325
++ IVG GK+TL I+
Sbjct: 10 KVAIVGRPNVGKSTLFNAILN 30
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 30.0 bits (66), Expect = 0.35
Identities = 5/17 (29%), Positives = 10/17 (58%)
Query: 305 RICIVGDNGAGKTTLLK 321
++ ++G G GK+ L
Sbjct: 5 KLVVLGSGGVGKSALTV 21
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus
influenzae [TaxId: 727]}
Length = 158
Score = 29.7 bits (66), Expect = 0.38
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Query: 306 ICIVGDNGAGKTTL----LKIIMGIISPTAGTRTVHRNLKFGYFSQHHVD 351
+ + GD GAGKTTL L+ I + + T T+ +H D
Sbjct: 36 VYLNGDLGAGKTTLTRGMLQGIGHQGNVKSPTYTLVEEYNIAGKMIYHFD 85
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 30.0 bits (66), Expect = 0.41
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 303 ESRICIVGDNGAGKTTLLK 321
E R+ ++GD +GK++L+
Sbjct: 5 ELRLGVLGDARSGKSSLIH 23
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 29.6 bits (65), Expect = 0.44
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 305 RICIVGDNGAGKTTLLK 321
R+ +VG G GK+ L
Sbjct: 7 RLVVVGGGGVGKSALTI 23
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 30.0 bits (67), Expect = 0.49
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 305 RICIVGDNGAGKTTLLKII 323
RI + G G GKTT +
Sbjct: 7 RIYLDGAYGIGKTTAAEEF 25
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 30.0 bits (67), Expect = 0.51
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 305 RICIVGDNGAGKTTLLKII 323
R+ I G +G GKTT +++
Sbjct: 6 RVYIDGPHGMGKTTTTQLL 24
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 29.6 bits (65), Expect = 0.56
Identities = 10/61 (16%), Positives = 19/61 (31%), Gaps = 5/61 (8%)
Query: 306 ICIVGDNGAGKTTLLKIIMGI-----ISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCV 360
+ + G + GK+T+++ + S +A TR G L
Sbjct: 5 VVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQ 64
Query: 361 Q 361
Sbjct: 65 G 65
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 29.8 bits (66), Expect = 0.58
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 305 RICIVGDNGAGKTTLLKIIMGI 326
+I +VG AGK+++L+ +G
Sbjct: 28 QIAVVGGQSAGKSSVLENFVGR 49
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 29.6 bits (65), Expect = 0.59
Identities = 5/18 (27%), Positives = 9/18 (50%)
Query: 306 ICIVGDNGAGKTTLLKII 323
+ + G G G TT ++
Sbjct: 4 VVVTGVPGVGSTTSSQLA 21
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides
[TaxId: 1063]}
Length = 288
Score = 29.9 bits (67), Expect = 0.62
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 306 ICIVGDNGAGKTTLLKIIMGIIS 328
I + G +GAG +T+ I
Sbjct: 7 ISVTGSSGAGTSTVKHTFDQIFR 29
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 29.4 bits (64), Expect = 0.63
Identities = 12/61 (19%), Positives = 19/61 (31%), Gaps = 4/61 (6%)
Query: 305 RICIVGDNGAGKTTLLKIIMG----IISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCV 360
+ G + AGK++ L + + RT NL + VD V
Sbjct: 18 EVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYAEV 77
Query: 361 Q 361
Sbjct: 78 P 78
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus
[TaxId: 2261]}
Length = 329
Score = 29.6 bits (65), Expect = 0.69
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 307 CIVGDNGAGKTTLLKII 323
IVG NG+GK+ + I
Sbjct: 30 AIVGANGSGKSNIGDAI 46
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 29.6 bits (66), Expect = 0.77
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 305 RICIVGDNGAGKTTLLKII 323
RI + G G GK+T +++
Sbjct: 8 RIYLDGVYGIGKSTTGRVM 26
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 29.4 bits (65), Expect = 0.87
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 305 RICIVGDNGAGKTTLLKIIMG----IISPTAGT 333
I ++G G GK++ + I+G ISP
Sbjct: 34 TILVMGKGGVGKSSTVNSIIGERVVSISPFQSE 66
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 29.4 bits (65), Expect = 1.00
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 305 RICIVGDNGAGKTTLLKIIMGI 326
+ + G+ G+GK++ + + GI
Sbjct: 58 NVAVTGETGSGKSSFINTLRGI 79
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 794
Score = 29.3 bits (65), Expect = 1.1
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 306 ICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQL 353
I I G++GAGKT K ++ + A + + + G DQ+
Sbjct: 126 ILITGESGAGKTVNTKRVIQYFATIAASGEKKKEEQSGKMQGTLEDQI 173
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 28.5 bits (62), Expect = 1.2
Identities = 5/17 (29%), Positives = 10/17 (58%)
Query: 305 RICIVGDNGAGKTTLLK 321
+ I+G +GK+ L+
Sbjct: 9 TVAILGGESSGKSVLVN 25
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 28.4 bits (62), Expect = 1.4
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 306 ICIVGDNGAGKTTLLKII 323
+ + G G GKTTL+
Sbjct: 4 VFLTGPPGVGKTTLIHKA 21
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase
domain {Simian virus 40 [TaxId: 10633]}
Length = 362
Score = 28.9 bits (64), Expect = 1.5
Identities = 22/153 (14%), Positives = 47/153 (30%), Gaps = 21/153 (13%)
Query: 193 GNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFIDTFRYNANRASSVQ--SKIKQLERL 250
G Y F LK ++E + + E F + N+ + Q ++
Sbjct: 25 GMYLEFQYSFEMCLKCIKKEQPSHYKYHEKHYANAAIFADSKNQKTICQQAVDTVLAKKR 84
Query: 251 PELKPIEKEVEVVLKFPDTELLSPPILQLSEVNFEYVPGKPILTNV-------------C 297
+ + +E + +F + L I+ S + + + +
Sbjct: 85 VDSLQLTREQMLTNRF-NDLLDRMDIMFGSTGSADIEEWMAGVAWLHCLLPKMDSVVYDF 143
Query: 298 LGATLESR-----ICIVGDNGAGKTTLLKIIMG 325
L + + G +GKTTL ++
Sbjct: 144 LKCMVYNIPKKRYWLFKGPIDSGKTTLAAALLE 176
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium
discoideum, class-I myosin MyoE [TaxId: 44689]}
Length = 684
Score = 28.9 bits (64), Expect = 1.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 306 ICIVGDNGAGKTTLLKIIM 324
+ I G++GAGKT K IM
Sbjct: 89 VIISGESGAGKTEASKKIM 107
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 28.0 bits (61), Expect = 1.5
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 305 RICIVGDNGAGKTTLLKIIM 324
R+ ++G GAGK T +
Sbjct: 4 RMVLIGPPGAGKGTQAPNLQ 23
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 28.1 bits (61), Expect = 1.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 306 ICIVGDNGAGKTTLLKII 323
+ I G+ G+GKTT L
Sbjct: 12 VLIEGNIGSGKTTYLNHF 29
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 28.0 bits (61), Expect = 1.7
Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 6/60 (10%)
Query: 306 ICIVGDNGAGKTTLLKIIMG------IISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRC 359
+ + G +GAGK+TLLK + S + TR + G ++
Sbjct: 3 VVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRDIA 62
>d1ynba1 a.211.1.1 (A:7-173) Hypothetical protein AF1432 {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 167
Score = 27.7 bits (61), Expect = 1.8
Identities = 13/97 (13%), Positives = 33/97 (34%), Gaps = 5/97 (5%)
Query: 121 VILAGLGFTPEMQKRATKHFSGGWRKMAIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDI 180
+ A ++ +R G R+ + W+E+ + V D +
Sbjct: 70 LHEARTMDLHKIARRYVSCDEEGAREEQLSWMESKPDFSDVEVYV-----SDADKLELAF 124
Query: 181 FHLHSQRIDTYRGNYEAFDKIKTEKLKNQQREIEAQR 217
+ + +Y + ++KT+ K R + ++
Sbjct: 125 QGVEYSQQVSYAIRFAENVELKTDAAKEIYRVLMERK 161
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho,
ATPase domain {Escherichia coli [TaxId: 562]}
Length = 289
Score = 28.4 bits (63), Expect = 1.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 305 RICIVGDNGAGKTTLLKIIM 324
R IV AGKT LL+ I
Sbjct: 45 RGLIVAPPKAGKTMLLQNIA 64
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 28.1 bits (61), Expect = 1.9
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 306 ICIVGDNGAGKTTLLKII 323
+ G G GK+T+L +
Sbjct: 4 GIVTGIPGVGKSTVLAKV 21
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 27.9 bits (61), Expect = 1.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 305 RICIVGDNGAGKTTLLKII 323
R I+G G+GK T+ I
Sbjct: 8 RAAIMGAPGSGKGTVSSRI 26
Score = 25.6 bits (55), Expect = 9.6
Identities = 12/100 (12%), Positives = 27/100 (27%), Gaps = 4/100 (4%)
Query: 132 MQKRATKHFSGGWRKMAIIWLENYLQNWPTTLLVVSHDRHFLDSVPTDIFHLHSQRIDTY 191
G+ + T++ ++ + TD +R+ Y
Sbjct: 79 KNLTQYNWLLDGFPRTLPQAEALDRAYQIDTVINLNVPFEVIKQRLTDRPETVVKRLKAY 138
Query: 192 RGNYEAFDKIKTEKLKNQQREIEAQRMHR--EHVQKFIDT 229
E ++ + K ++ HV F+ T
Sbjct: 139 EAQTEPV--LEYYRKKGVLETFSGTETNKIWPHVYAFLQT 176
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 28.2 bits (62), Expect = 2.0
Identities = 13/51 (25%), Positives = 17/51 (33%)
Query: 306 ICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMN 356
I G G+GK+ I + G F H DQL +N
Sbjct: 30 IFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYLTHEDQLKLN 80
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1
ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 276
Score = 28.2 bits (63), Expect = 2.1
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 305 RICIVGDNGAGKTTLLKIIM 324
+I + G G GKT L+ ++
Sbjct: 70 KIGLFGGAGVGKTVLIMELI 89
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli
[TaxId: 562]}
Length = 308
Score = 28.1 bits (62), Expect = 2.1
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 306 ICIVGDNGAGKTTLLKIIMGIISPTAGTRTVH 337
I I G GK+T +++ ++S R V
Sbjct: 83 ISIAGSVAVGKSTTARVLQALLSRWPEHRRVE 114
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 27.6 bits (60), Expect = 2.1
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 305 RICIVGDNGAGKTTLLKII 323
R ++G GAGK T +
Sbjct: 5 RAVLLGPPGAGKGTQAPKL 23
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 28.0 bits (61), Expect = 2.2
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 306 ICIVGDNGAGKTTLLKII 323
+ VG G+GKTTL
Sbjct: 3 VVFVGTAGSGKTTLTGEF 20
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia
coli [TaxId: 562]}
Length = 179
Score = 27.6 bits (60), Expect = 2.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 305 RICIVGDNGAGKTTLLKII 323
RI ++G AGK T + I
Sbjct: 2 RIILLGAPVAGKGTQAQFI 20
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken
(Gallus gallus), Va isoform [TaxId: 9031]}
Length = 730
Score = 28.2 bits (62), Expect = 2.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 306 ICIVGDNGAGKTTLLKIIM 324
I + G++GAGKT K M
Sbjct: 97 IIVSGESGAGKTVSAKYAM 115
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 27.6 bits (60), Expect = 2.3
Identities = 7/51 (13%), Positives = 19/51 (37%)
Query: 306 ICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMN 356
I + G +GK+++ I+ ++ + + S + V +
Sbjct: 5 IGVSGGTASGKSSVCAKIVQLLGQNEVDYRQKQVVILSQDSFYRVLTSEQK 55
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 27.5 bits (60), Expect = 2.5
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 305 RICIVGDNGAGKTTLLKIIM 324
++ I G +GK T ++I
Sbjct: 5 KVMISGAPASGKGTQCELIK 24
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay
scallop (Aequipecten irradians) [TaxId: 31199]}
Length = 789
Score = 28.1 bits (62), Expect = 2.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 306 ICIVGDNGAGKTTLLKIIM 324
I G++GAGKT K ++
Sbjct: 124 CLITGESGAGKTENTKKVI 142
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni
[TaxId: 197]}
Length = 161
Score = 27.2 bits (59), Expect = 2.7
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 306 ICIVGDNGAGKTTLLKII 323
I +G G+GK+TL + +
Sbjct: 3 IVFIGFMGSGKSTLARAL 20
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 27.3 bits (59), Expect = 2.8
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 305 RICIVGDNGAGKTTLLKII 323
+ +VG G+GK+T+ + +
Sbjct: 3 KAVLVGLPGSGKSTIGRRL 21
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1
ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Length = 285
Score = 27.5 bits (61), Expect = 2.9
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 305 RICIVGDNGAGKTTLLKIIM 324
R I+GD GKT++ +
Sbjct: 70 RELIIGDRQTGKTSIAIDTI 89
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 27.2 bits (59), Expect = 2.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 306 ICIVGDNGAGKTTLLKIIM 324
I I G +G GK+TLLK +
Sbjct: 4 IVISGPSGTGKSTLLKKLF 22
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 27.4 bits (60), Expect = 2.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 306 ICIVGDNGAGKTTLL 320
+ +VG NG GKTT +
Sbjct: 9 VLVVGVNGVGKTTTI 23
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI
{Rhodobacter capsulatus [TaxId: 1061]}
Length = 333
Score = 27.6 bits (60), Expect = 2.9
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 306 ICIVGDNGAGKTTLLKIIMGIISP 329
+ + GD G GK+T ++ + ++
Sbjct: 31 VLVFGDRGTGKSTAVRALAALLPE 54
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain
{Dictyostelium discoideum [TaxId: 44689]}
Length = 712
Score = 28.1 bits (62), Expect = 2.9
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 306 ICIVGDNGAGKTTLLKIIM 324
+ I G++GAGKT K ++
Sbjct: 128 LLITGESGAGKTENTKKVI 146
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 27.2 bits (59), Expect = 3.0
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 305 RICIVGDNGAGKTTLLKII 323
+ ++G GAGK T + I
Sbjct: 2 NLVLMGLPGAGKGTQAEKI 20
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 27.1 bits (59), Expect = 3.0
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 306 ICIVGDNGAGKTTLL 320
+VG +GKTTL+
Sbjct: 4 WQVVGYKHSGKTTLM 18
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal
(G) domain {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 227
Score = 27.3 bits (59), Expect = 3.3
Identities = 15/53 (28%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 306 ICIVGDNGAGKTTLLKIIMG--IISPTAGTRTVHRNLKFGYFSQHHVDQLDMN 356
+ ++G GKTTLL I G + S AG T H D
Sbjct: 8 VSVLGHVDHGKTTLLDHIRGSAVASREAGGITQHIGATEIPMDVIEGICGDFL 60
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 27.0 bits (58), Expect = 3.4
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 305 RICIVGDNGAGKTTLLKII 323
I +VG GAGK+T+ + +
Sbjct: 4 NIFLVGPMGAGKSTIGRQL 22
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 27.2 bits (59), Expect = 3.6
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 305 RICIVGDNGAGKTTLLKIIM 324
R+ ++G GAGK T +
Sbjct: 2 RVLLLGPPGAGKGTQAVKLA 21
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 27.1 bits (59), Expect = 3.6
Identities = 5/19 (26%), Positives = 13/19 (68%)
Query: 306 ICIVGDNGAGKTTLLKIIM 324
+ +GAGK++L++ ++
Sbjct: 5 YIVSAPSGAGKSSLIQALL 23
>d1knza_ e.34.1.1 (A:) NSP3 homodimer {Simian 11 rotavirus [TaxId:
10923]}
Length = 157
Score = 26.8 bits (59), Expect = 3.7
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 64 DSVLECDTKRQNLLNREKTITQAINNGTADANMSTELTQVFAELEAIEADKAPARASVIL 123
D V++ + N + + TI QA+NN A + + ++ D R ++L
Sbjct: 45 DFVMDDSGVKNNPIGKAITIDQALNNKFGSAIRNRNWLADTSRPAKLDEDVNKLR--MML 102
Query: 124 AGLGFTPEMQ 133
+ G +M+
Sbjct: 103 SSKGIDQKMR 112
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 27.3 bits (59), Expect = 3.7
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 305 RICIVGDNGAGKTTLLKII 323
R+ I G+ GK+T +K++
Sbjct: 4 RLSIEGNIAVGKSTFVKLL 22
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence
recognition protein Ffh {Archaeon Acidianus ambivalens
[TaxId: 2283]}
Length = 211
Score = 27.0 bits (59), Expect = 3.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 306 ICIVGDNGAGKTT 318
I +VG G GK T
Sbjct: 15 IMLVGVQGTGKAT 27
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 26.8 bits (58), Expect = 3.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 305 RICIVGDNGAGKTTLLKII 323
I + G G GKTTL K +
Sbjct: 6 NILLTGTPGVGKTTLGKEL 24
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 27.0 bits (59), Expect = 3.9
Identities = 9/13 (69%), Positives = 10/13 (76%)
Query: 306 ICIVGDNGAGKTT 318
I +VG NG GKTT
Sbjct: 14 IMVVGVNGTGKTT 26
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 26.9 bits (59), Expect = 4.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 306 ICIVGDNGAGKTTLL 320
I +VG NG GKTT +
Sbjct: 12 ILMVGVNGVGKTTTI 26
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 26.8 bits (58), Expect = 4.2
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 305 RICIVGDNGAGKTTLLKIIM 324
I ++G GAGK T I+
Sbjct: 2 NIVLMGLPGAGKGTQADRIV 21
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 26.9 bits (58), Expect = 4.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 305 RICIVGDNGAGKTTLLKII 323
+I I G+ AGK+T + I+
Sbjct: 4 KISIEGNIAAGKSTFVNIL 22
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 26.9 bits (58), Expect = 4.3
Identities = 11/58 (18%), Positives = 17/58 (29%), Gaps = 6/58 (10%)
Query: 306 ICIVGDNGAGKTTLLKIIM------GIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNL 357
I G G GK+T K + I V + + S + N+
Sbjct: 5 YIITGPAGVGKSTTCKRLAAQLDNSAYIEGDIINHMVVGGYRPPWESDELLALTWKNI 62
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 27.1 bits (58), Expect = 4.9
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 306 ICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRN 339
++G G GKT L+ + + R V+ N
Sbjct: 46 ATLLGRPGTGKTVTLRKLWELYKDKTTARFVYIN 79
>d1muka_ e.8.1.4 (A:) Reovirus polymerase lambda3 {Reovirus [TaxId:
10891]}
Length = 1264
Score = 27.2 bits (60), Expect = 5.0
Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 5/71 (7%)
Query: 344 YFSQ-----HHVDQLDMNLRCVQLLEAAFPGKPQEEYRRQLGGFGVSGDLALQFVGSLSG 398
YF+Q V LD+N LL G ++ QL G+ A G +
Sbjct: 1104 YFAQTLFMAKTVSGLDVNAIDSALLRLRTLGADKKALTAQLLMVGLQESEADALAGKIML 1163
Query: 399 GQKSRVAFARM 409
+ V AR+
Sbjct: 1164 QDVNTVQLARV 1174
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 26.5 bits (57), Expect = 5.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 305 RICIVGDNGAGKTTLLKII 323
I I G G GKT++ ++I
Sbjct: 7 NILITGTPGTGKTSMAEMI 25
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 26.5 bits (57), Expect = 5.0
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 306 ICIVGDNGAGKTTLLKII 323
I +VG G G TT+ + +
Sbjct: 5 IFMVGARGCGMTTVGREL 22
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 26.5 bits (57), Expect = 5.1
Identities = 9/58 (15%), Positives = 18/58 (31%), Gaps = 3/58 (5%)
Query: 305 RICIVGDNGAGKTTLLKIIM---GIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRC 359
+ ++G G+GK T I+ G + +AG + +
Sbjct: 8 VVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQSGSKDGEMIATMIKNGEIV 65
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 26.4 bits (57), Expect = 5.3
Identities = 3/19 (15%), Positives = 11/19 (57%)
Query: 306 ICIVGDNGAGKTTLLKIIM 324
+ ++G +G G+ + ++
Sbjct: 6 LVLLGAHGVGRRHIKNTLI 24
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB
{Bacillus caldotenax [TaxId: 1395]}
Length = 413
Score = 27.0 bits (59), Expect = 5.5
Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 7/106 (6%)
Query: 168 HDRHFLDSVPTDIFHLHSQRIDTYRGNYEAFDKIKTEKLKNQQREIEAQRMHREHVQKFI 227
+R + P F +++ N E + + +L+ Q + +EAQR+ + + +
Sbjct: 235 GEREHVAIFPASHFVTREEKMRLAIQNIEQELEERLAELRAQGKLLEAQRL-EQRTRYDL 293
Query: 228 DTFRYNANRASSVQSKIKQLERLPEL-KPIEKEVEVVLKFPDTELL 272
+ R S I+ R L P ++ FPD L+
Sbjct: 294 EMM-----REMGFCSGIENYSRHLALRPPGSTPYTLLDYFPDDFLI 334
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence
recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Length = 207
Score = 26.6 bits (58), Expect = 5.6
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 306 ICIVGDNGAGKTT 318
+VG G+GKTT
Sbjct: 13 WFLVGLQGSGKTT 25
>d2i5ha1 e.71.1.1 (A:16-195) Hypothetical protein AF1531
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 180
Score = 26.3 bits (58), Expect = 5.6
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 200 KIKTEKLKNQ-QREIEA--QRMHREHVQKFIDTFRYNANRASSVQSKIKQLERLPELKP 255
+++ E L + E+ + + ++ +K++D F N+A S+ +++ QLE LP +
Sbjct: 71 RLRYEDLTPAAKTELPYVIEHIIKQDEKKYVDFF----NKADSITTRMHQLELLPGVGK 125
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Archaeon Pyrococcus abyssi
[TaxId: 29292]}
Length = 195
Score = 26.5 bits (57), Expect = 5.7
Identities = 17/73 (23%), Positives = 25/73 (34%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCVQLLE 364
I +VG GKTTL K + G+ + T F+ + + R
Sbjct: 7 NIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPV 66
Query: 365 AAFPGKPQEEYRR 377
+ G E RR
Sbjct: 67 CPYCGHETEFVRR 79
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 26.6 bits (57), Expect = 5.9
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 306 ICIVGDNGAGKTTLLKII 323
I I G +GAGK TL++ +
Sbjct: 3 IAIEGVDGAGKRTLVEKL 20
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 26.3 bits (56), Expect = 6.0
Identities = 8/37 (21%), Positives = 14/37 (37%)
Query: 306 ICIVGDNGAGKTTLLKIIMGIISPTAGTRTVHRNLKF 342
+ I G + +GKTTL + + + V
Sbjct: 25 LGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDH 61
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit
cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae
pv. tomato [TaxId: 323]}
Length = 222
Score = 26.3 bits (57), Expect = 6.2
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 305 RICIVGDNGAGKTTLL 320
R G+ GK+TL+
Sbjct: 11 RFLTCGNVDDGKSTLI 26
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 26.4 bits (57), Expect = 6.3
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 306 ICIVGDNGAGKTTLLKII 323
I I G+ G+GK+T+ ++
Sbjct: 6 IGITGNIGSGKSTVAALL 23
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB
{Escherichia coli [TaxId: 562]}
Length = 433
Score = 26.8 bits (58), Expect = 6.4
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 292 ILTNVCLGATLESR-ICIVGDNGAGKTTLLKIIM 324
+ V + E R + + G G GK+ LL+ +
Sbjct: 38 TVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELA 71
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 26.7 bits (58), Expect = 6.5
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 305 RICIVGDNGAGKTTLL 320
R+ + G GAGK+T L
Sbjct: 56 RLGVTGTPGAGKSTFL 71
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium
extorquens [TaxId: 408]}
Length = 323
Score = 26.4 bits (57), Expect = 6.7
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 305 RICIVGDNGAGKTTLL 320
R+ I G G GK+T +
Sbjct: 53 RVGITGVPGVGKSTTI 68
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus
thermophilus [TaxId: 274]}
Length = 387
Score = 26.6 bits (58), Expect = 7.0
Identities = 10/72 (13%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Query: 306 ICIVGDNGAGKTTL-----LKIIMGIISPTAGTRTVHRNLKFGYFSQHHVDQLDMNLRCV 360
++G+ G GKT + +I+ G + + + +L+ G + + R
Sbjct: 46 PVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIV-SLQMGSLLAGAKYRGEFEERLK 104
Query: 361 QLLEAAFPGKPQ 372
+++ + +
Sbjct: 105 AVIQEVVQSQGE 116
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 194
Score = 26.1 bits (56), Expect = 7.7
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 305 RICIVGDNGAGKTTLLKIIM 324
+ ++G GAGK T I+
Sbjct: 3 VVFVLGGPGAGKGTQCARIV 22
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 341
Score = 26.2 bits (57), Expect = 7.8
Identities = 4/19 (21%), Positives = 10/19 (52%)
Query: 306 ICIVGDNGAGKTTLLKIIM 324
+ ++ GK+TL ++
Sbjct: 20 MSVIAHVDHGKSTLTDSLV 38
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 26.1 bits (56), Expect = 8.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 306 ICIVGDNGAGKTTLLKII 323
+ G G+GKT+L I
Sbjct: 35 FLLGGQPGSGKTSLRSAI 52
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 25.7 bits (55), Expect = 9.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 305 RICIVGDNGAGKTTLLKIIMGIIS 328
I +VG GKTTL++ I GI +
Sbjct: 10 NIGVVGHVDHGKTTLVQAITGIWT 33
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.135 0.393
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,596,968
Number of extensions: 74939
Number of successful extensions: 409
Number of sequences better than 10.0: 1
Number of HSP's gapped: 391
Number of HSP's successfully gapped: 198
Length of query: 443
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 355
Effective length of database: 1,199,356
Effective search space: 425771380
Effective search space used: 425771380
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.3 bits)