BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2080
(93 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8K215|LYRM4_MOUSE LYR motif-containing protein 4 OS=Mus musculus GN=Lyrm4 PE=2 SV=1
Length = 91
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 59/82 (71%)
Query: 4 SKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELE 63
S+ +L LY+A++RES F AYNYRMY +RR R+ F+ NKNV + +I L N+ ++LE
Sbjct: 5 SRAQVLDLYRAMMRESKHFSAYNYRMYAVRRIRDAFRENKNVKDPVEIQALVNKAKRDLE 64
Query: 64 VLKRQVLISQLFKPDKLVIETQ 85
+++RQV I QL+ DKL+IE Q
Sbjct: 65 IIRRQVHIGQLYSTDKLIIENQ 86
>sp|Q0VCG0|LYRM4_BOVIN LYR motif-containing protein 4 OS=Bos taurus GN=LYRM4 PE=3 SV=1
Length = 91
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 58/82 (70%)
Query: 4 SKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELE 63
S+ +L LY+A+LRES +F AYNYR Y +RR R+ F+ NKNV + +I L N+ ++L
Sbjct: 5 SRAQVLDLYRAMLRESKRFGAYNYRTYAIRRIRDAFRENKNVKDPVEIQALVNKAKRDLG 64
Query: 64 VLKRQVLISQLFKPDKLVIETQ 85
+++RQV I Q++ DKLVIE Q
Sbjct: 65 IIRRQVHIGQMYSTDKLVIENQ 86
>sp|Q9HD34|LYRM4_HUMAN LYR motif-containing protein 4 OS=Homo sapiens GN=LYRM4 PE=1 SV=1
Length = 91
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 58/82 (70%)
Query: 4 SKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELE 63
S+ +L LY+A+LRES +F AYNYR Y +RR R+ F+ NKNV + +I L N+ ++L
Sbjct: 5 SRAQVLSLYRAMLRESKRFSAYNYRTYAVRRIRDAFRENKNVKDPVEIQTLVNKAKRDLG 64
Query: 64 VLKRQVLISQLFKPDKLVIETQ 85
V++RQV I QL+ DKL+IE +
Sbjct: 65 VIRRQVHIGQLYSTDKLIIENR 86
>sp|B5FZA8|LYRM4_TAEGU LYR motif-containing protein 4 OS=Taeniopygia guttata GN=LYRM4
PE=3 SV=1
Length = 89
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 58/82 (70%)
Query: 2 SVSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKE 61
+ S+ +L+LY+ALLRES +F +YNYR Y +RR R+ F+ NKN+ ++E+I L N+
Sbjct: 3 ASSRAQVLRLYRALLRESQRFSSYNYRTYAIRRIRDAFRENKNIADSEKIEELLNKAKAN 62
Query: 62 LEVLKRQVLISQLFKPDKLVIE 83
LEV++RQ I ++ +KL+IE
Sbjct: 63 LEVIQRQGTIDHMYATEKLIIE 84
>sp|B8JLQ0|LYRM4_DANRE LYR motif-containing protein 4 OS=Danio rerio GN=lyrm4 PE=3 SV=1
Length = 89
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%)
Query: 2 SVSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKE 61
S S+ ++ LY+ L++ES KFP+YNYR Y LRR ++ F+ N +VDN + LL N+ +
Sbjct: 3 SCSRAQVISLYRMLMKESKKFPSYNYRTYALRRVKDGFRENLHVDNPRTLDLLINQAREN 62
Query: 62 LEVLKRQVLISQLFKPDKLVIETQ 85
L V+KRQV I L+ + V+E +
Sbjct: 63 LAVIKRQVSIGHLYSAQRTVVEKE 86
>sp|B5X5U9|LYM4A_SALSA LYR motif-containing protein 4A OS=Salmo salar GN=lyrm4a PE=3
SV=1
Length = 92
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 56/82 (68%)
Query: 2 SVSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKE 61
+ S+ ++ LY+ L++ES KFP+YNYR Y LRR ++ F+ N +VDN + + +L N+ +
Sbjct: 3 ACSRTQVISLYRMLIKESKKFPSYNYRTYALRRVKDSFRENLHVDNPKTLDMLLNQAREN 62
Query: 62 LEVLKRQVLISQLFKPDKLVIE 83
L V++RQV I Q++ + ++E
Sbjct: 63 LAVIRRQVSIGQMYTAQRTIVE 84
>sp|Q6DCS1|LYRM4_XENLA LYR motif-containing protein 4 OS=Xenopus laevis GN=lyrm4 PE=3
SV=1
Length = 89
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 54/81 (66%)
Query: 4 SKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELE 63
S+ +L LYK +LRES +F +YNYR Y +RR R+ F+ KNVD+ +I L + + L
Sbjct: 5 SRSQVLSLYKIMLRESQRFSSYNYRTYAIRRIRDAFREKKNVDDFLEIETLLHRAKENLN 64
Query: 64 VLKRQVLISQLFKPDKLVIET 84
V++RQV I Q++ KLVIE+
Sbjct: 65 VIQRQVTIGQMYATHKLVIES 85
>sp|B5XD90|LYM4B_SALSA LYR motif-containing protein 4B OS=Salmo salar GN=lyrm4b PE=3
SV=1
Length = 84
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 58/83 (69%)
Query: 1 MSVSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLK 60
M+ +L LY+ L++ES+KFP+YNYR Y LRR ++ F++N++V++ + + L N+G
Sbjct: 1 MAACTAQVLSLYRKLMKESNKFPSYNYRTYALRRVQDAFRANRSVEDPKMVEQLLNQGRD 60
Query: 61 ELEVLKRQVLISQLFKPDKLVIE 83
L++++RQV I +++ K ++E
Sbjct: 61 NLDMIRRQVAIGKMYPTQKTIVE 83
>sp|P82116|BCN92_DROSU Protein bcn92 OS=Drosophila subobscura GN=bcn92 PE=3 SV=1
Length = 92
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 1 MSVSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLK 60
MS + I LY+ LLRES K PAYN+RMY +R+ R+ F++NK + + +I G +
Sbjct: 1 MSTRRQAI-TLYRNLLRESEKLPAYNFRMYAVRKIRDAFRANKAIRDFAEIDRQMEAGKQ 59
Query: 61 ELEVLKRQVLISQLFKPDKLVIETQ 85
LE+++RQV+I L+ DKLVIE +
Sbjct: 60 NLELIRRQVIIGHLYTADKLVIENK 84
>sp|O46098|BCN92_DROME Protein bcn92 OS=Drosophila melanogaster GN=bcn92 PE=3 SV=1
Length = 92
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 1 MSVSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLK 60
MS + I LY+ LLRES K P+YN+RMY R+ R+ F++N++ + +I EG +
Sbjct: 1 MSTRRQAIT-LYRNLLRESEKLPSYNFRMYAARKIRDTFRANRSTRDFAEIDRQMAEGQQ 59
Query: 61 ELEVLKRQVLISQLFKPDKLVIE 83
LE+++RQV+I L+ DKLVIE
Sbjct: 60 NLELIRRQVIIGHLYSADKLVIE 82
>sp|Q54FN9|LYRM4_DICDI LYR motif-containing protein 4 OS=Dictyostelium discoideum
GN=lyrm4 PE=3 SV=1
Length = 81
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 5 KDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELEV 64
K ++L LY++L+RES KF +YN+R Y LRR F+ NKN D NE L+ + LK LE+
Sbjct: 4 KSVVLHLYRSLVRESKKFSSYNFREYSLRRVSVGFRENKNKDQNETKELI-QDALKNLEM 62
Query: 65 LKRQVLISQLFKPDKLVIE 83
+KRQ I+ ++ +KLV+E
Sbjct: 63 VKRQAFINSMYSTNKLVVE 81
>sp|Q6Q560|ISD11_YEAST Protein ISD11 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ISD11 PE=1 SV=1
Length = 94
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 53/82 (64%)
Query: 2 SVSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKE 61
+ ++ +L LYK ++ +++F YN+R YFL +TR F+ N N + + + L+ E +
Sbjct: 6 APTRRQVLSLYKEFIKNANQFNNYNFREYFLSKTRTTFRKNMNQQDPKVLMNLFKEAKND 65
Query: 62 LEVLKRQVLISQLFKPDKLVIE 83
L VLKRQ +ISQ++ D+LV+E
Sbjct: 66 LGVLKRQSVISQMYTFDRLVVE 87
>sp|O60068|ISD11_SCHPO Protein isd11 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=isd11 PE=3 SV=1
Length = 102
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 1 MSVSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLK 60
MSVSK +++LY+ +L+ S FP Y YR Y +RRTR+KF+ K + + + K
Sbjct: 1 MSVSKQHVVRLYRNILKTSKLFP-YTYREYTIRRTRDKFKELKVESDPAKFEQGIKDSEK 59
Query: 61 ELEVLKRQVLISQLFKPDKLVIE 83
LE+++RQ +I+ ++ LV+E
Sbjct: 60 LLEIIQRQSIINGMYNKRNLVVE 82
>sp|B2GV91|LYRM2_RAT LYR motif-containing protein 2 OS=Rattus norvegicus GN=Lyrm2 PE=3
SV=1
Length = 88
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 8 ILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEG---LKELE 63
+L LY+ +LR + P+ + R Y RE+F+ NK+ + I ++ +G LKELE
Sbjct: 22 VLLLYRKILRAIKQIPSDSDRKYLQDWAREEFKRNKSATEEDTIRMMITQGNMQLKELE 80
>sp|Q8R033|LYRM2_MOUSE LYR motif-containing protein 2 OS=Mus musculus GN=Lyrm2 PE=2 SV=1
Length = 88
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 8 ILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEG---LKELE 63
+L LY+ +LR + P+ + R Y RE+F+ NK+ + I ++ +G LKELE
Sbjct: 22 VLLLYRKILRAIRQVPSDSDRKYLQDWAREEFKRNKSATEEDTIRMMITQGNMQLKELE 80
>sp|Q5PQ90|LYRM2_XENLA LYR motif-containing protein 2 OS=Xenopus laevis GN=lyrm2 PE=3
SV=1
Length = 87
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 5 KDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELEV 64
+ +L LY+ ++R + P R Y R++F+ NK I ++ + G ++L+
Sbjct: 18 RQQVLGLYRRIVRAVRQIPGAADRQYLQDWARDEFRRNKGASEEIAIRMMISHGQRQLQE 77
Query: 65 LKR 67
L+R
Sbjct: 78 LER 80
>sp|B3DLF3|LYRM2_XENTR LYR motif-containing protein 2 OS=Xenopus tropicalis GN=lyrm2
PE=3 SV=1
Length = 87
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 34/68 (50%)
Query: 5 KDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELEV 64
+ +L LY+ +LR + P + Y RE+F+ NK I ++ G ++L+
Sbjct: 18 RQQVLGLYRKILRSVRQIPDAADQRYMQEWAREEFRRNKGATEEIAIRMMITHGQRQLQE 77
Query: 65 LKRQVLIS 72
L+R + ++
Sbjct: 78 LERALHLA 85
>sp|Q5RES3|LYRM2_PONAB LYR motif-containing protein 2 OS=Pongo abelii GN=LYRM2 PE=3 SV=1
Length = 88
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 3 VSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEG---L 59
V + +L LY+ +L+ + P + R Y RE+F+ NK+ + I ++ +G L
Sbjct: 17 VRRQQVLLLYRRILQTIRQVPNDSDRKYLKDWAREEFKRNKSATEEDTIRMMITQGNMQL 76
Query: 60 KELE 63
KELE
Sbjct: 77 KELE 80
>sp|Q9NU23|LYRM2_HUMAN LYR motif-containing protein 2 OS=Homo sapiens GN=LYRM2 PE=1 SV=1
Length = 88
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 3 VSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEG---L 59
V + +L LY+ +L+ + P + R Y RE+F+ NK+ + I ++ +G L
Sbjct: 17 VRRQQVLLLYRRILQTIRQVPNDSDRKYLKDWAREEFRRNKSATEEDTIRMMITQGNMQL 76
Query: 60 KELE 63
KELE
Sbjct: 77 KELE 80
>sp|Q503U1|LYM5A_DANRE LYR motif-containing protein 5A OS=Danio rerio GN=lyrm5a PE=3
SV=1
Length = 85
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 8 ILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEG---LKELEV 64
+++LYK LL ++P YF R + F NK+V + E+I L + G +KELE
Sbjct: 9 VIRLYKNLLYLGREYPKGT--AYFRERLKTAFMKNKDVTDPEKIQKLIDRGDFVIKELEA 66
Query: 65 L 65
L
Sbjct: 67 L 67
>sp|Q5RIM0|LYRM2_DANRE LYR motif-containing protein 2 OS=Danio rerio GN=lyrm2 PE=3 SV=1
Length = 88
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 8 ILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELEVLKR 67
+L LY+ L R + P + R Y R++F+ NK+ + + I ++ ++ LE L+R
Sbjct: 22 VLCLYRDLQRTIRRVPHESDRKYLRDWARDEFRRNKSNTDQDAIRMMISQAHNHLEELRR 81
Query: 68 QVLIS 72
+ ++
Sbjct: 82 SLALA 86
>sp|Q3UN90|LYRM9_MOUSE LYR motif-containing protein 9 OS=Mus musculus GN=Lyrm9 PE=3 SV=1
Length = 78
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 31/57 (54%)
Query: 9 LKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELEVL 65
L+LY+ LLR + P + ++ R+ FQ + + DN+E+I + +++ + +
Sbjct: 14 LQLYRYLLRCCRQLPTKGIQEHYKHAVRQSFQVHSDEDNSERIQQIIKRAIEDADWI 70
>sp|Q9CQB7|LYRM1_MOUSE LYR motif-containing protein 1 OS=Mus musculus GN=Lyrm1 PE=2 SV=1
Length = 122
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 2 SVSKDMILKLYKALLRESSKFPAYNYRM--------YFLRRTREKFQSNKNVDNNEQISL 53
+ ++ +L LY+++ R + K+ A + +M Y L+ R FQ NKN+ + E I
Sbjct: 3 AATRQEVLCLYRSIFRLARKWQAASGQMEDTIEEKQYILKEARTLFQKNKNLTDPELIKQ 62
Query: 54 LYNEGLKELEV 64
E +E+
Sbjct: 63 CIVECTARIEI 73
>sp|Q32LM5|LYRM2_BOVIN LYR motif-containing protein 2 OS=Bos taurus GN=LYRM2 PE=3 SV=1
Length = 88
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 8 ILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEG---LKELE 63
+L LY+ +L+ + P + R Y RE+F+ NK+ + I ++ +G LKELE
Sbjct: 22 VLLLYRRILQAIRQVPNDSDRKYLKDWAREEFKRNKSATEEDTIRMMITQGNMQLKELE 80
>sp|B2RZD7|LYRM9_RAT LYR motif-containing protein 9 OS=Rattus norvegicus GN=Lyrm9 PE=3
SV=1
Length = 78
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 9 LKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELEVL 65
L+LY+ LLR + P + ++ R+ FQ + + DN E+I + +++ + +
Sbjct: 14 LQLYRYLLRCCRQLPTKGIQEHYKHAVRQSFQVHSDEDNPERIQQIIRRAIEDADWI 70
>sp|B5XFA7|LYRM2_SALSA LYR motif-containing protein 2 OS=Salmo salar GN=lyrm2 PE=3 SV=1
Length = 90
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 28/56 (50%)
Query: 3 VSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEG 58
+ + +L LY+ ++R + P R Y R++F+ NKN N + I ++ +
Sbjct: 17 IQRQKVLSLYRNMMRTIRQVPDEGDRKYLRDWARDEFKRNKNSTNQDAIRMMITQA 72
>sp|B2RYU8|LYRM1_RAT LYR motif-containing protein 1 OS=Rattus norvegicus GN=Lyrm1 PE=2
SV=1
Length = 122
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 2 SVSKDMILKLYKALLRESSKFPAYNYRM--------YFLRRTREKFQSNKNVDNNEQISL 53
+ S+ +L LY++ R + K+ A + +M Y L R FQ NKN+ + + I
Sbjct: 3 AASRQEVLGLYRSFFRLARKWQAASGQMEDTIKEKQYILNEARTLFQKNKNLTDPDLIKQ 62
Query: 54 LYNEGLKELEV 64
+E +E+
Sbjct: 63 CIDECTARIEI 73
>sp|Q91V16|LYRM5_MOUSE LYR motif-containing protein 5 OS=Mus musculus GN=Lyrm5 PE=2 SV=1
Length = 86
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 8 ILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEG---LKELEV 64
+L LYK LL +P YF RR + F NK+V++ E+I L G +KELE
Sbjct: 9 VLTLYKNLLYLGRDYPKGA--DYFKRRLKNVFLKNKDVEDPEKIKELIARGEFVMKELEA 66
Query: 65 L 65
L
Sbjct: 67 L 67
>sp|Q38VP5|SYL_LACSS Leucine--tRNA ligase OS=Lactobacillus sakei subsp. sakei (strain
23K) GN=leuS PE=3 SV=1
Length = 807
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 16 LRESSKFPAYNYRMYFLRRTREKFQSNKNV--DNNEQISLLYNEGLK----ELEVLKRQV 69
L + KF +R+Y T E Q + + DNN+Q+ +YNE +K + E + V
Sbjct: 619 LAGARKFLDRVWRLYTEEDTDENDQLSSKIVADNNDQLKKVYNETVKKVTEDFESMHFNV 678
Query: 70 LISQL 74
ISQL
Sbjct: 679 AISQL 683
>sp|A8MSI8|LYRM9_HUMAN LYR motif-containing protein 9 OS=Homo sapiens GN=LYRM9 PE=2 SV=2
Length = 78
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/57 (22%), Positives = 30/57 (52%)
Query: 9 LKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELEVL 65
L+LY+ LLR + P + ++ R+ F+ + + DN E+I + +++ + +
Sbjct: 14 LQLYRYLLRCCQQLPTKGIQQHYKHAVRQSFRVHSDEDNPERIQQIIKRAIEDADWI 70
>sp|B5FXA0|LYRM5_TAEGU LYR motif-containing protein 5 OS=Taeniopygia guttata GN=LYRM5
PE=3 SV=1
Length = 86
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 8 ILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEG---LKELEV 64
++KLYK LL ++P YF RR + F NK+ + E+I L G +KELE
Sbjct: 9 VIKLYKNLLYLGREYPKGA--DYFRRRLKAAFLKNKDETDPEKIKQLIARGEFVIKELEA 66
Query: 65 L 65
L
Sbjct: 67 L 67
>sp|O43325|LYRM1_HUMAN LYR motif-containing protein 1 OS=Homo sapiens GN=LYRM1 PE=2 SV=1
Length = 122
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 2 SVSKDMILKLYKALLRESSKFPAYNYRM--------YFLRRTREKFQSNKNVDNNEQISL 53
+ ++ +L LY+++ R + K+ A + +M Y L R F+ NKN+ + + I
Sbjct: 3 TATRQEVLGLYRSIFRLARKWQATSGQMEDTIKEKQYILNEARTLFRKNKNLTDTDLIKQ 62
Query: 54 LYNEGLKELEV 64
+E +E+
Sbjct: 63 CIDECTARIEI 73
>sp|A5D7J1|LYRM9_BOVIN LYR motif-containing protein 9 OS=Bos taurus GN=LYRM9 PE=3 SV=1
Length = 78
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/57 (22%), Positives = 30/57 (52%)
Query: 9 LKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELEVL 65
L+LY+ LLR + P + ++ R+ F+ + + DN E+I + +++ + +
Sbjct: 14 LQLYRYLLRCCRQLPTKGIQEHYKHAVRQSFRVHSDEDNPERIQQIIKRAIEDADWI 70
>sp|Q6BIY6|ACN9_DEBHA Acetate non-utilizing protein 9, mitochondrial OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=ACN9 PE=3 SV=1
Length = 121
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 9 LKLYKALLR-ESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQI 51
LKLYKALLR ++K P R + + +F+++KN+DN I
Sbjct: 25 LKLYKALLRAHANKLPV-ELRPLGDQYVKAEFKAHKNIDNPLHI 67
>sp|A3KNJ8|LYM5B_DANRE LYR motif-containing protein 5B OS=Danio rerio GN=lyrm5b PE=3
SV=1
Length = 84
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 8 ILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEG---LKELEV 64
+ +LYKALL ++P YF R R F NK++ + ++I L + G +KELE
Sbjct: 9 VKQLYKALLFLGREYP--KGADYFRERLRAAFAKNKDMRDPDKIKQLISRGEFVVKELEA 66
Query: 65 L 65
L
Sbjct: 67 L 67
>sp|Q55BM0|SDHFB_DICDI Succinate dehydrogenase assembly factor 1 homolog B,
mitochondrial OS=Dictyostelium discoideum GN=sdhaf1B
PE=3 SV=1
Length = 111
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 4 SKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNN--EQISLLYNEGLKE 61
+K ++L LYK L + + P Y +M + KF+SNK + E I L +G +E
Sbjct: 9 NKRLVLDLYKRCLYSAKRCPKYQNQMMMESYIKLKFRSNKEIHQKDFETIENLLKQGEEE 68
Query: 62 LEVL 65
L+ +
Sbjct: 69 LKSM 72
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.349
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,191,252
Number of Sequences: 539616
Number of extensions: 992084
Number of successful extensions: 3167
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 3132
Number of HSP's gapped (non-prelim): 47
length of query: 93
length of database: 191,569,459
effective HSP length: 63
effective length of query: 30
effective length of database: 157,573,651
effective search space: 4727209530
effective search space used: 4727209530
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)