Your job contains 1 sequence.
>psy2081
MTGYLGVYAQRTKHLFDYDVVNPKIEIIDGRRYRVNPSWPSTYEDKSEADPYQRSEYDAG
CPGGNQPYEEDDGGLSEDEDLDIYLGKDGQYKYQCHIPKSFYPFIIGVKGSTKRRIESET
NTQLSIPRQGQTGDIIISSYSERGIASAKRRLDLLLVFARKKIPYTHLLSIPMNVPNIQE
NFAKFKATVLSDFSRCRGIEESLFQEPGRLHITMGMLMLADSVERDQAVEVLQKCGNNII
LPILRSQRIKINLKGLEIMNDDPAEVDILYAKVVDDSGLVQKLCDDVVQYFISQHLISKA
YQKYDTVKMHVTLMNSKYRMRQNPSSDTNSEKRSTFNAKDILESLGDFEFGETFVYCVHL
SQRHTHDMDGYFKPSAVISL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2081
(380 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1NT55 - symbol:ASCC1 "Uncharacterized protein"... 550 3.8e-53 1
ZFIN|ZDB-GENE-050417-80 - symbol:ascc1 "activating signal... 548 6.3e-53 1
UNIPROTKB|F5H874 - symbol:ASCC1 "Activating signal cointe... 532 3.1e-51 1
UNIPROTKB|Q0IIJ9 - symbol:ASCC1 "Uncharacterized protein"... 528 8.3e-51 1
UNIPROTKB|I3L6H8 - symbol:ASCC1 "Uncharacterized protein"... 518 9.5e-50 1
UNIPROTKB|E2RKL0 - symbol:ASCC1 "Uncharacterized protein"... 515 2.0e-49 1
RGD|1359255 - symbol:Ascc1 "activating signal cointegrato... 513 3.2e-49 1
UNIPROTKB|Q8N9N2 - symbol:ASCC1 "Activating signal cointe... 451 4.2e-49 2
MGI|MGI:1916340 - symbol:Ascc1 "activating signal cointeg... 502 4.7e-48 1
UNIPROTKB|I3LBQ6 - symbol:ASCC1 "Uncharacterized protein"... 479 1.3e-45 1
FB|FBgn0033475 - symbol:CG12129 species:7227 "Drosophila ... 461 1.0e-43 1
UNIPROTKB|H0YCB3 - symbol:ASCC1 "Activating signal cointe... 456 3.5e-43 1
WB|WBGene00016019 - symbol:C23H3.3 species:6239 "Caenorha... 309 1.3e-27 1
UNIPROTKB|J9NUQ6 - symbol:ASCC1 "Uncharacterized protein"... 287 2.9e-25 1
UNIPROTKB|E9PSA3 - symbol:ASCC1 "Activating signal cointe... 267 3.8e-23 1
UNIPROTKB|E9PR40 - symbol:ASCC1 "Activating signal cointe... 209 9.6e-23 2
UNIPROTKB|F1SU93 - symbol:F1SU93 "Uncharacterized protein... 243 1.4e-20 1
UNIPROTKB|E9PQZ6 - symbol:ASCC1 "Activating signal cointe... 229 6.6e-19 1
TAIR|locus:2094907 - symbol:AT3G16220 "AT3G16220" species... 225 1.9e-18 1
UNIPROTKB|E9PM82 - symbol:ASCC1 "Activating signal cointe... 213 4.6e-17 1
UNIPROTKB|H0YE76 - symbol:ASCC1 "Activating signal cointe... 208 1.7e-16 1
UNIPROTKB|E9PKM6 - symbol:ASCC1 "Activating signal cointe... 175 8.1e-13 1
UNIPROTKB|H0YER2 - symbol:ASCC1 "Activating signal cointe... 148 7.6e-10 1
UNIPROTKB|E9PL92 - symbol:ASCC1 "Activating signal cointe... 134 2.6e-08 1
UNIPROTKB|H0YE79 - symbol:ASCC1 "Activating signal cointe... 93 0.00074 1
>UNIPROTKB|F1NT55 [details] [associations]
symbol:ASCC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR009210 Pfam:PF00013 PIRSF:PIRSF027019 PROSITE:PS50084
SMART:SM00322 GO:GO:0005737 GO:GO:0006355 GO:GO:0003723
InterPro:IPR019510 Pfam:PF10469 GeneTree:ENSGT00390000000046
EMBL:AADN02027972 EMBL:AADN02027973 EMBL:AADN02027983
EMBL:AADN02027974 EMBL:AADN02027975 EMBL:AADN02027976
EMBL:AADN02027977 EMBL:AADN02027978 EMBL:AADN02027979
EMBL:AADN02027980 EMBL:AADN02027981 EMBL:AADN02027982
IPI:IPI00596838 Ensembl:ENSGALT00000007036 ArrayExpress:F1NT55
Uniprot:F1NT55
Length = 354
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 114/293 (38%), Positives = 181/293 (61%)
Query: 93 YQCHI--PKSFYPFIIGVKGSTKRRIESETNTQLSIPRQGQTGDIIISSYSERGIASAKR 150
+QC + P Y +IIG KG TK+RIE+ET T +SIP+ G G+I+I+ G+ SA+
Sbjct: 56 FQCRVEVPSPLYKYIIGKKGETKKRIETETRTSISIPKPGLEGEIVITGQQRGGVISART 115
Query: 151 RLDLLLVFARKKIPYTHLLSIPMNVPNIQENFAKFKATVLSDFSRCRGIEESLFQEPGRL 210
R+D+LL RKK P+TH LS +N P +QE F +FK VL S+ G+ SLFQ P +L
Sbjct: 116 RIDVLLDSFRKKQPFTHFLSFALNQPVVQEKFLQFKEEVLEKCSQDHGVSSSLFQNPAKL 175
Query: 211 HITMGMLMLADSVERDQAVEVLQKCGNNIILPILRSQRIKINLKGLEIMNDDPAEVDILY 270
H+T+G L+L + E +A ++LQ+C + + I + + + + G+E MNDDPA +D+LY
Sbjct: 176 HLTLGTLVLLNEQEIQRACDLLQQCKEDFVDQITGGKPLSVEVAGVEYMNDDPAMMDVLY 235
Query: 271 AKV--VDDSGLVQKLCDDVVQYFISQHLISKAYQKYDTVKMHVTLMNSKYRMRQNPSSDT 328
AKV D S +Q + D +V+ F++ L+ + ++D VK+H T+MN+ +R + +++
Sbjct: 236 AKVHMKDGSDKLQVIADQLVEKFVASGLMLR---EWDRVKLHATVMNTLFRKDPSGAAEE 292
Query: 329 NS---------EKRSTFNAKDILESLGDFEFGETFVYCVHLSQRHTHDMDGYF 372
S ++R +FN ++IL+ +F FGE + V LSQR++ D GY+
Sbjct: 293 RSSTVSGKSSFKERESFNGRNILKLFENFSFGEVQLDAVLLSQRYSSDASGYY 345
>ZFIN|ZDB-GENE-050417-80 [details] [associations]
symbol:ascc1 "activating signal cointegrator 1
complex subunit 1" species:7955 "Danio rerio" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR009210 Pfam:PF00013 PIRSF:PIRSF027019 PROSITE:PS50084
SMART:SM00322 ZFIN:ZDB-GENE-050417-80 GO:GO:0005737 GO:GO:0006355
GO:GO:0003723 InterPro:IPR019510 Pfam:PF10469 CTD:51008
HOGENOM:HOG000261687 HOVERGEN:HBG050588 EMBL:BC093287
IPI:IPI00570081 RefSeq:NP_001017610.1 UniGene:Dr.85122
ProteinModelPortal:Q566X5 DNASU:550273 GeneID:550273
KEGG:dre:550273 NextBio:20879535 Uniprot:Q566X5
Length = 353
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 127/370 (34%), Positives = 208/370 (56%)
Query: 19 DVVNPKIEIIDGRRYRVNPSWPSTYEDKSEADPYQRSEYDAGCPGGNQPYXXXXXXXXXX 78
+V+ P + I+GR YR NP TYE++ E Y + D C ++P
Sbjct: 2 EVLRPPLININGRIYRKNPVQEETYEEEEEDCSYSEAAVDQ-CL--DEPCDAHNIEQT-- 56
Query: 79 XXXXIYLGKDGQYKYQCHIPKSFYPFIIGVKGSTKRRIESETNTQLSIPRQGQTGDIIIS 138
D ++ +P Y +IIG KG T+RR+ESET T ++IP+QG G I+++
Sbjct: 57 ---------DRGFRCALDVPSVLYKYIIGKKGETRRRLESETKTSINIPKQGVEGQIVVT 107
Query: 139 SYSERGIASAKRRLDLLLVFARKKIPYTHLLSIPMNVPNIQENFAKFKATVLSDFSRCRG 198
++SA R+++L+ R+K P+TH LS +N ++E F +F+ VL S+ G
Sbjct: 108 GAHRPSVSSAVTRIEVLIDSFRRKQPFTHFLSFALNHAQVREGFLRFREEVLEHCSQDSG 167
Query: 199 IEESLFQEPGRLHITMGMLMLADSVERDQAVEVLQKCGNNIILPILRSQRIKINLKGLEI 258
++ S+FQ P +LH+T+G L+L + E +A E+L +C + I I ++ + + ++G+E
Sbjct: 168 VDVSIFQNPDKLHLTIGTLVLLNQQEVTRANELLHQC-QDTIREITGAEALPVEVRGVEY 226
Query: 259 MNDDPAEVDILYAKVV--DDSGLVQKLCDDVVQYFISQHLISKAYQKYDTVKMHVTLMNS 316
MNDDP+ VD+LYAKV D S +Q++ D +V+ F+S L+ + + D VK+H T+MN+
Sbjct: 227 MNDDPSMVDVLYAKVSVQDGSDRLQQISDRLVECFVSAGLMER---ERDRVKIHATVMNT 283
Query: 317 KYRMRQNPSSD-------TNSEKRSTFNAKDILESLGDFEFGETFVYCVHLSQRHTHDMD 369
+R ++PS++ N R FN K+IL+ GDF FG + V +SQR + D
Sbjct: 284 LFR--RDPSAEDRGAPARANPRDREAFNGKNILQMFGDFYFGAFELNSVQISQRFSTDSS 341
Query: 370 GYFKPSAVIS 379
GY+ + I+
Sbjct: 342 GYYSSAGHIT 351
>UNIPROTKB|F5H874 [details] [associations]
symbol:ASCC1 "Activating signal cointegrator 1 complex
subunit 1" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR009210
Pfam:PF00013 PIRSF:PIRSF027019 PROSITE:PS50084 SMART:SM00322
GO:GO:0005737 GO:GO:0006355 GO:GO:0003723 InterPro:IPR019510
Pfam:PF10469 EMBL:AL607035 EMBL:AC022392 HGNC:HGNC:24268
IPI:IPI00434390 ProteinModelPortal:F5H874 SMR:F5H874
Ensembl:ENST00000545550 UCSC:uc010qju.2 OMA:IATIIDE
ArrayExpress:F5H874 Bgee:F5H874 Uniprot:F5H874
Length = 379
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 127/366 (34%), Positives = 201/366 (54%)
Query: 19 DVVNPKIEIIDGRRYRVNPSWPSTYE-DKSEADPYQRSEYDAGCPGGNQPYXXXXXXXXX 77
+V+ P++ IDGR YR NP TY+ ++ E D YQ S C ++P
Sbjct: 24 EVLRPQLIRIDGRNYRKNPVQEQTYQHEEDEEDFYQGS---MEC--ADEPCDAYEVEQT- 77
Query: 78 XXXXXIYLGKDGQYKYQCHIPKSFYPFIIGVKGSTKRRIESETNTQLSIPRQGQTGDIII 137
G ++ P Y I+G +G T+++IE ET T +SIP+ GQ G+I+I
Sbjct: 78 ---------PQG-FRSTLRAPSLLYKHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVI 127
Query: 138 SSYSERGIASAKRRLDLLLVFARKKIPYTHLLSIPMNVPNIQENFAKFKATVLSDFSRCR 197
+ G+ SA+ R+D+LL R+K P+TH L+ +N +QE F +F+ VL+ S
Sbjct: 128 TGQHRNGVISARTRIDVLLDTFRRKQPFTHFLAFFLNEVEVQEGFLRFQEEVLAKCSMDH 187
Query: 198 GIEESLFQEPGRLHITMGMLMLADSVERDQAVEVLQKCGNNIILPILRSQRIKINLKGLE 257
G++ S+FQ P +LH+T+GML+L E Q E+LQ+C I I + +++ + G+E
Sbjct: 188 GVDSSIFQNPKKLHLTIGMLVLLSEEEIQQTCEMLQQCKEEFINDISGGKPLEVEMAGIE 247
Query: 258 IMNDDPAEVDILYAKV--VDDSGLVQKLCDDVVQYFISQHLISKAYQKYDTVKMHVTLMN 315
MNDDP VD+LYAKV D S +Q+L D V++ F + LI K ++++VK+H T+MN
Sbjct: 248 YMNDDPGMVDVLYAKVHMKDGSNRLQELVDRVLERFQASGLIVK---EWNSVKLHATVMN 304
Query: 316 SKYRMRQNPSSDTNS---------EKRSTFNAKDILESLGDFEFGETFVYCVHLSQRHTH 366
+ +R N N ++R +F+ ++IL+ +F FG + +H+SQR T
Sbjct: 305 TLFRKDPNAEGRYNLYTAEGKYIFKERESFDGRNILKLFENFYFGSLKLNSIHISQRFTV 364
Query: 367 DMDGYF 372
D G +
Sbjct: 365 DSFGNY 370
>UNIPROTKB|Q0IIJ9 [details] [associations]
symbol:ASCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR009210 Pfam:PF00013 PIRSF:PIRSF027019 PROSITE:PS50084
SMART:SM00322 GO:GO:0005737 GO:GO:0006355 GO:GO:0003723
GO:GO:0005667 InterPro:IPR019510 Pfam:PF10469 CTD:51008
eggNOG:NOG237734 HOGENOM:HOG000261687 HOVERGEN:HBG050588
GeneTree:ENSGT00390000018119 OMA:RCKEEFI OrthoDB:EOG4KH2VG
EMBL:DAAA02061868 EMBL:BC122605 IPI:IPI00698794
RefSeq:NP_001069509.1 UniGene:Bt.62878 Ensembl:ENSBTAT00000000504
GeneID:534915 KEGG:bta:534915 InParanoid:Q0IIJ9 NextBio:20876569
Uniprot:Q0IIJ9
Length = 357
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 124/365 (33%), Positives = 199/365 (54%)
Query: 19 DVVNPKIEIIDGRRYRVNPSWPSTYEDKSEADPYQRSEYDAGCPGGNQPYXXXXXXXXXX 78
+V+ P++ I GR YR NP TY+ + E D Y + + C +P
Sbjct: 2 EVLRPQLIKIGGRVYRKNPIQEQTYQHEEEDDDYYQGLVE--C--AEEPCETYE------ 51
Query: 79 XXXXIYLGKDGQYKYQCHIPKSFYPFIIGVKGSTKRRIESETNTQLSIPRQGQTGDIIIS 138
+ G ++ P Y I+G +G T++++E ET T +SIP+ GQ G+I+I+
Sbjct: 52 ----VVQTPQG-FRCTVKAPSLLYKHIVGKRGDTRKKLEVETKTSISIPKPGQEGEIVIT 106
Query: 139 SYSERGIASAKRRLDLLLVFARKKIPYTHLLSIPMNVPNIQENFAKFKATVLSDFSRCRG 198
G+ SA+ R+D+LL+ R+K P+TH L+ +N +QE F KF+ VL S G
Sbjct: 107 GQHRSGVVSARTRIDVLLLTFRRKQPFTHFLAFFLNEAEVQERFLKFQEEVLEKCSMDHG 166
Query: 199 IEESLFQEPGRLHITMGMLMLADSVERDQAVEVLQKCGNNIILPILRSQRIKINLKGLEI 258
++ S+FQ P +LH+T+GML+L E Q E+LQ+C I I + +++ + G+E
Sbjct: 167 VDSSIFQNPKKLHLTIGMLVLLSEQEIQQTCEMLQQCKEEFIDDISGGKPLEVEMSGIEY 226
Query: 259 MNDDPAEVDILYAKV--VDDSGLVQKLCDDVVQYFISQHLISKAYQKYDTVKMHVTLMNS 316
MNDDP VD+LYAKV D S +Q+L D V++ F + LI K ++++VK+H T+MN+
Sbjct: 227 MNDDPGMVDVLYAKVHMKDGSNRLQELVDRVLERFQASGLIVK---EWNSVKLHATVMNT 283
Query: 317 KYRMRQNPSSDTNS---------EKRSTFNAKDILESLGDFEFGETFVYCVHLSQRHTHD 367
+R N N ++R +F+ ++IL+ +F FG + +H+SQR T D
Sbjct: 284 LFRKDPNAEGRYNLYTADGKYIFKERESFDGRNILKLFENFYFGTLKLNSIHISQRFTVD 343
Query: 368 MDGYF 372
G +
Sbjct: 344 SFGNY 348
>UNIPROTKB|I3L6H8 [details] [associations]
symbol:ASCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR009210 Pfam:PF00013 PIRSF:PIRSF027019 PROSITE:PS50084
SMART:SM00322 GO:GO:0005737 GO:GO:0006355 GO:GO:0003723
InterPro:IPR019510 Pfam:PF10469 CTD:51008
GeneTree:ENSGT00390000018119 OMA:RCKEEFI EMBL:FP565279
RefSeq:NP_001231012.1 UniGene:Ssc.55553 UniGene:Ssc.71596
Ensembl:ENSSSCT00000022544 GeneID:100512075 KEGG:ssc:100512075
Uniprot:I3L6H8
Length = 357
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 122/365 (33%), Positives = 198/365 (54%)
Query: 19 DVVNPKIEIIDGRRYRVNPSWPSTYEDKSEADPYQRSEYDAGCPGGNQPYXXXXXXXXXX 78
+V+ P++ I GR YR NP TY+ + E D Y + C +P
Sbjct: 2 EVLRPQLLRIGGRVYRKNPIQEQTYQHEEEDDDYYHGLME--C--AEEPCEAYE------ 51
Query: 79 XXXXIYLGKDGQYKYQCHIPKSFYPFIIGVKGSTKRRIESETNTQLSIPRQGQTGDIIIS 138
+ G ++ P Y I+G +G T++++E ET T ++IP+ GQ G+I+I+
Sbjct: 52 ----VVQTPQG-FRCTVKAPSLLYKHIVGKRGDTRKKLEVETKTSITIPKPGQEGEIVIT 106
Query: 139 SYSERGIASAKRRLDLLLVFARKKIPYTHLLSIPMNVPNIQENFAKFKATVLSDFSRCRG 198
G+ SA+ R+D+LL+ R+K P+TH L+ +N +QE F KF+ VL S G
Sbjct: 107 GQHRSGVISARTRIDVLLLTFRRKQPFTHFLAFFLNEVEVQERFLKFQEEVLEKCSMDHG 166
Query: 199 IEESLFQEPGRLHITMGMLMLADSVERDQAVEVLQKCGNNIILPILRSQRIKINLKGLEI 258
++ ++FQ P +LH+T+GML+L E Q E+LQ+C I I + +++ + G+E
Sbjct: 167 VDSTIFQNPKKLHLTIGMLVLLSEQEIQQTCEMLQQCKEEFIDDISGGKPLEVEMAGIEY 226
Query: 259 MNDDPAEVDILYAKV--VDDSGLVQKLCDDVVQYFISQHLISKAYQKYDTVKMHVTLMNS 316
MNDDP VD+LYAKV D S +Q+L D V++ F + LI K ++++VK+H T+MN+
Sbjct: 227 MNDDPGMVDVLYAKVHMKDGSNRLQELVDRVLERFQASGLIVK---EWNSVKLHATVMNT 283
Query: 317 KYRMRQNPSSDTNS---------EKRSTFNAKDILESLGDFEFGETFVYCVHLSQRHTHD 367
+R N N ++R +F+ ++IL+ +F FG + +H+SQR T D
Sbjct: 284 LFRKDPNAEGRYNLYTADGKYIFKERESFDGRNILKLFENFYFGTLKLNSIHISQRFTVD 343
Query: 368 MDGYF 372
G +
Sbjct: 344 SFGNY 348
>UNIPROTKB|E2RKL0 [details] [associations]
symbol:ASCC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR009210 Pfam:PF00013
PIRSF:PIRSF027019 PROSITE:PS50084 SMART:SM00322 GO:GO:0005737
GO:GO:0006355 GO:GO:0003723 GO:GO:0005667 InterPro:IPR019510
Pfam:PF10469 GeneTree:ENSGT00390000018119 OMA:RCKEEFI
EMBL:AAEX03002823 EMBL:AAEX03002822 Ensembl:ENSCAFT00000022904
Uniprot:E2RKL0
Length = 357
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 121/365 (33%), Positives = 199/365 (54%)
Query: 19 DVVNPKIEIIDGRRYRVNPSWPSTYEDKSEADPYQRSEYDAGCPGGNQPYXXXXXXXXXX 78
+V+ P++ I GR YR NP TY+ + E + + + + C P
Sbjct: 2 EVLRPQLVRIGGRIYRKNPIQEQTYQHEEEDEDFYQGFVE--C--AEDPCDAYE------ 51
Query: 79 XXXXIYLGKDGQYKYQCHIPKSFYPFIIGVKGSTKRRIESETNTQLSIPRQGQTGDIIIS 138
+ + G ++ P Y I+G +G T++++E ET T +SIP+ GQ G+I+I+
Sbjct: 52 ----VVQTQQG-FRCTVKAPSLLYRHIVGKRGDTRKKLEVETKTSISIPKPGQEGEIVIT 106
Query: 139 SYSERGIASAKRRLDLLLVFARKKIPYTHLLSIPMNVPNIQENFAKFKATVLSDFSRCRG 198
G+ SA+ R+D+LL+ R+K P+TH L+ +N +QE F KF+ VL S G
Sbjct: 107 GQHRSGVISARTRIDVLLLTFRRKQPFTHFLAFFLNEAEVQERFLKFQEEVLEKCSMDHG 166
Query: 199 IEESLFQEPGRLHITMGMLMLADSVERDQAVEVLQKCGNNIILPILRSQRIKINLKGLEI 258
++ ++FQ P +LH+T+GML+L E Q E+LQ+C I I + +++ + G+E
Sbjct: 167 VDSTIFQNPKKLHLTIGMLVLLSEQEIQQTCEMLQQCKEEFIDDISGGKPLEVEMAGIEY 226
Query: 259 MNDDPAEVDILYAKV--VDDSGLVQKLCDDVVQYFISQHLISKAYQKYDTVKMHVTLMNS 316
MNDDP VD+LYAKV D S +Q+L D V++ F + LI K ++++VK+H T+MN+
Sbjct: 227 MNDDPGMVDVLYAKVHMKDGSNRLQELVDRVLERFQASGLIVK---EWNSVKLHATVMNT 283
Query: 317 KYRMRQNPSSDTNS---------EKRSTFNAKDILESLGDFEFGETFVYCVHLSQRHTHD 367
+R N N ++R +F+ ++IL+ +F FG + +H+SQR T D
Sbjct: 284 LFRKDPNAEGRYNLYTADGKYIFKERESFDGRNILKLFENFYFGTLKLNSIHISQRFTVD 343
Query: 368 MDGYF 372
G +
Sbjct: 344 SFGNY 348
>RGD|1359255 [details] [associations]
symbol:Ascc1 "activating signal cointegrator 1 complex subunit
1" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005667 "transcription factor complex" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR009210 Pfam:PF00013
PIRSF:PIRSF027019 PROSITE:PS50084 SMART:SM00322 RGD:1359255
GO:GO:0005737 GO:GO:0006355 GO:GO:0003723 InterPro:IPR019510
Pfam:PF10469 CTD:51008 GeneTree:ENSGT00390000018119 OMA:RCKEEFI
EMBL:CH474016 RefSeq:NP_001007633.1 UniGene:Rn.16141
Ensembl:ENSRNOT00000000701 GeneID:294512 KEGG:rno:294512
NextBio:638237 Uniprot:G3V619
Length = 356
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 108/286 (37%), Positives = 172/286 (60%)
Query: 98 PKSFYPFIIGVKGSTKRRIESETNTQLSIPRQGQTGDIIISSYSERGIASAKRRLDLLLV 157
P Y I+G +G TK++IE ET T ++IP+ G G+I+I+ + G+ SA+ R+D+LL
Sbjct: 65 PSLLYKHIVGKRGDTKKKIEVETKTSINIPKLGHEGEIVITGHHRNGVVSARTRIDVLLD 124
Query: 158 FARKKIPYTHLLSIPMNVPNIQENFAKFKATVLSDFSRCRGIEESLFQEPGRLHITMGML 217
R++ P+TH LS +N +QE F +F+A VL S+ RG++ ++FQ P +LH+T+GML
Sbjct: 125 TFRRRQPFTHFLSFFLNEVEVQERFLEFQAEVLKKCSKDRGVDSTIFQNPKKLHLTIGML 184
Query: 218 MLADSVERDQAVEVLQKCGNNIILPILRSQRIKINLKGLEIMNDDPAEVDILYAKV--VD 275
+L E Q E+LQ+C I I + +++ + G+E MNDDPA VD+LYAKV D
Sbjct: 185 VLLSEQEIQQTCEILQRCKEEFINDISGGKPLEVEMAGIEYMNDDPAMVDVLYAKVHMKD 244
Query: 276 DSGLVQKLCDDVVQYFISQHLISKAYQKYDTVKMHVTLMNSKYRMRQNPSSDTNS----- 330
S +Q+L D V++ F S L+ K ++ +VK+H T+MN+ R N N
Sbjct: 245 GSNRLQELVDRVLERFQSMGLVMK---EWTSVKLHATVMNTLLRKDPNAEGRYNLYTADG 301
Query: 331 ----EKRSTFNAKDILESLGDFEFGETFVYCVHLSQRHTHDMDGYF 372
++R +F+ ++IL++ +F FG + +H+SQR T D G +
Sbjct: 302 KYIFKERESFDGRNILKTFENFYFGSLKLNSIHISQRFTVDSFGNY 347
>UNIPROTKB|Q8N9N2 [details] [associations]
symbol:ASCC1 "Activating signal cointegrator 1 complex
subunit 1" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR009210
Pfam:PF00013 PIRSF:PIRSF027019 PROSITE:PS50084 SMART:SM00322
GO:GO:0005737 GO:GO:0006355 EMBL:CH471083 GO:GO:0006351
GO:GO:0003723 GO:GO:0005667 InterPro:IPR019510 Pfam:PF10469
EMBL:AL607035 EMBL:AY013290 EMBL:AF132952 EMBL:AK094170
EMBL:AK023436 EMBL:AC022392 EMBL:BC012291 IPI:IPI00434389
IPI:IPI01013403 RefSeq:NP_001185727.1 RefSeq:NP_001185728.1
RefSeq:NP_001185729.1 UniGene:Hs.500007 ProteinModelPortal:Q8N9N2
SMR:Q8N9N2 STRING:Q8N9N2 PhosphoSite:Q8N9N2 DMDM:50400556
PaxDb:Q8N9N2 PRIDE:Q8N9N2 DNASU:51008 Ensembl:ENST00000317126
Ensembl:ENST00000317168 Ensembl:ENST00000342444
Ensembl:ENST00000373101 Ensembl:ENST00000394915
Ensembl:ENST00000394919 GeneID:51008 KEGG:hsa:51008 UCSC:uc001jss.2
UCSC:uc001jst.2 CTD:51008 GeneCards:GC10M073856 HGNC:HGNC:24268
HPA:HPA038038 MIM:614215 MIM:614266 neXtProt:NX_Q8N9N2
Orphanet:1232 PharmGKB:PA134974899 eggNOG:NOG237734
HOGENOM:HOG000261687 HOVERGEN:HBG050588 InParanoid:Q8N9N2
GenomeRNAi:51008 NextBio:53486 ArrayExpress:Q8N9N2 Bgee:Q8N9N2
CleanEx:HS_ASCC1 Genevestigator:Q8N9N2 GermOnline:ENSG00000138303
Uniprot:Q8N9N2
Length = 400
Score = 451 (163.8 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 96/251 (38%), Positives = 154/251 (61%)
Query: 105 IIGVKGSTKRRIESETNTQLSIPRQGQTGDIIISSYSERGIASAKRRLDLLLVFARKKIP 164
I+G +G T+++IE ET T +SIP+ GQ G+I+I+ G+ SA+ R+D+LL R+K P
Sbjct: 101 IVGKRGDTRKKIEMETKTSISIPKPGQDGEIVITGQHRNGVISARTRIDVLLDTFRRKQP 160
Query: 165 YTHLLSIPMNVPNIQENFAKFKATVLSDFSRCRGIEESLFQEPGRLHITMGMLMLADSVE 224
+TH L+ +N +QE F +F+ VL+ S G++ S+FQ P +LH+T+GML+L E
Sbjct: 161 FTHFLAFFLNEVEVQEGFLRFQEEVLAKCSMDHGVDSSIFQNPKKLHLTIGMLVLLSEEE 220
Query: 225 RDQAVEVLQKCGNNIILPILRSQRIKINLKGLEIMNDDPAEVDILYAKV--VDDSGLVQK 282
Q E+LQ+C I I + +++ + G+E MNDDP VD+LYAKV D S +Q+
Sbjct: 221 IQQTCEMLQQCKEEFINDISGGKPLEVEMAGIEYMNDDPGMVDVLYAKVHMKDGSNRLQE 280
Query: 283 LCDDVVQYFISQHLISKAYQKYDTVKMHVTLMNSKYRMRQNPSSDTNS---------EKR 333
L D V++ F + LI K ++++VK+H T+MN+ +R N N ++R
Sbjct: 281 LVDRVLERFQASGLIVK---EWNSVKLHATVMNTLFRKDPNAEGRYNLYTAEGKYIFKER 337
Query: 334 STFNAKDILES 344
+F+ ++IL+S
Sbjct: 338 ESFDGRNILKS 348
Score = 78 (32.5 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 19 DVVNPKIEIIDGRRYRVNPSWPSTYE-DKSEADPYQRS 55
+V+ P++ IDGR YR NP TY+ ++ E D YQ S
Sbjct: 2 EVLRPQLIRIDGRNYRKNPVQEQTYQHEEDEEDFYQGS 39
>MGI|MGI:1916340 [details] [associations]
symbol:Ascc1 "activating signal cointegrator 1 complex
subunit 1" species:10090 "Mus musculus" [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR009210
Pfam:PF00013 PIRSF:PIRSF027019 PROSITE:PS50084 SMART:SM00322
MGI:MGI:1916340 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0003723 GO:GO:0005667 InterPro:IPR019510 Pfam:PF10469
CTD:51008 eggNOG:NOG237734 HOGENOM:HOG000261687 HOVERGEN:HBG050588
EMBL:AK007519 EMBL:AK139944 EMBL:AK171958 EMBL:BC030905
IPI:IPI00112275 RefSeq:NP_001186116.1 RefSeq:NP_081213.1
UniGene:Mm.155839 ProteinModelPortal:Q9D8Z1 SMR:Q9D8Z1
PhosphoSite:Q9D8Z1 PaxDb:Q9D8Z1 PRIDE:Q9D8Z1
Ensembl:ENSMUST00000050516 Ensembl:ENSMUST00000164083 GeneID:69090
KEGG:mmu:69090 UCSC:uc007feh.2 GeneTree:ENSGT00390000018119
InParanoid:Q9D8Z1 OMA:RCKEEFI OrthoDB:EOG4KH2VG ChiTaRS:ASCC1
NextBio:328580 Bgee:Q9D8Z1 Genevestigator:Q9D8Z1
GermOnline:ENSMUSG00000044475 Uniprot:Q9D8Z1
Length = 356
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 108/286 (37%), Positives = 169/286 (59%)
Query: 98 PKSFYPFIIGVKGSTKRRIESETNTQLSIPRQGQTGDIIISSYSERGIASAKRRLDLLLV 157
P Y I+G +G TK++IE ET T ++IP+ G G+I+I+ G+ SA+ R+D+LL
Sbjct: 65 PSLLYKHIVGKRGDTKKKIEVETKTSINIPKHGHEGEIVITGQHRNGVVSARTRIDVLLD 124
Query: 158 FARKKIPYTHLLSIPMNVPNIQENFAKFKATVLSDFSRCRGIEESLFQEPGRLHITMGML 217
R++ P+TH LS +N +QE F F+ VL S+ RG++ ++FQ P +LH+T+GML
Sbjct: 125 TFRRRQPFTHFLSFFLNEVEVQERFLMFQEEVLRKCSKDRGVDSTIFQNPKKLHLTIGML 184
Query: 218 MLADSVERDQAVEVLQKCGNNIILPILRSQRIKINLKGLEIMNDDPAEVDILYAKV--VD 275
+L E Q E+LQ+C I I + +++ + G+E MNDDPA VD+LYAKV D
Sbjct: 185 VLLSEQEIQQTCEILQRCKEEFINDISGGRPLEVEMAGIEYMNDDPAMVDVLYAKVHMKD 244
Query: 276 DSGLVQKLCDDVVQYFISQHLISKAYQKYDTVKMHVTLMNSKYRMRQNPSSDTNS----- 330
S +Q+L D V++ F S LI K ++ +VK+H T+MN+ R N N
Sbjct: 245 GSNRLQELVDRVLERFQSLGLIVK---EWTSVKLHATVMNTLLRKDPNAEGRYNLYTADG 301
Query: 331 ----EKRSTFNAKDILESLGDFEFGETFVYCVHLSQRHTHDMDGYF 372
++R +F+ ++IL++ +F FG + +H+SQR T D G +
Sbjct: 302 KYIFKERESFDGRNILKTFENFYFGSLRLNSIHISQRFTVDSFGNY 347
>UNIPROTKB|I3LBQ6 [details] [associations]
symbol:ASCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR009210 Pfam:PF00013 PIRSF:PIRSF027019 PROSITE:PS50084
SMART:SM00322 GO:GO:0005737 GO:GO:0006355 GO:GO:0003723
InterPro:IPR019510 Pfam:PF10469 CTD:51008
GeneTree:ENSGT00390000018119 EMBL:FP565279 UniGene:Ssc.55553
UniGene:Ssc.71596 GeneID:100512075 KEGG:ssc:100512075
RefSeq:NP_001231013.1 Ensembl:ENSSSCT00000030401 Uniprot:I3LBQ6
Length = 407
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 113/339 (33%), Positives = 184/339 (54%)
Query: 19 DVVNPKIEIIDGRRYRVNPSWPSTYEDKSEADPYQRSEYDAGCPGGNQPYXXXXXXXXXX 78
+V+ P++ I GR YR NP TY+ + E D Y + C +P
Sbjct: 2 EVLRPQLLRIGGRVYRKNPIQEQTYQHEEEDDDYYHGLME--C--AEEPCEAYE------ 51
Query: 79 XXXXIYLGKDGQYKYQCHIPKSFYPFIIGVKGSTKRRIESETNTQLSIPRQGQTGDIIIS 138
+ G ++ P Y I+G +G T++++E ET T ++IP+ GQ G+I+I+
Sbjct: 52 ----VVQTPQG-FRCTVKAPSLLYKHIVGKRGDTRKKLEVETKTSITIPKPGQEGEIVIT 106
Query: 139 SYSERGIASAKRRLDLLLVFARKKIPYTHLLSIPMNVPNIQENFAKFKATVLSDFSRCRG 198
G+ SA+ R+D+LL+ R+K P+TH L+ +N +QE F KF+ VL S G
Sbjct: 107 GQHRSGVISARTRIDVLLLTFRRKQPFTHFLAFFLNEVEVQERFLKFQEEVLEKCSMDHG 166
Query: 199 IEESLFQEPGRLHITMGMLMLADSVERDQAVEVLQKCGNNIILPILRSQRIKINLKGLEI 258
++ ++FQ P +LH+T+GML+L E Q E+LQ+C I I + +++ + G+E
Sbjct: 167 VDSTIFQNPKKLHLTIGMLVLLSEQEIQQTCEMLQQCKEEFIDDISGGKPLEVEMAGIEY 226
Query: 259 MNDDPAEVDILYAKV--VDDSGLVQKLCDDVVQYFISQHLISKAYQKYDTVKMHVTLMNS 316
MNDDP VD+LYAKV D S +Q+L D V++ F + LI K ++++VK+H T+MN+
Sbjct: 227 MNDDPGMVDVLYAKVHMKDGSNRLQELVDRVLERFQASGLIVK---EWNSVKLHATVMNT 283
Query: 317 KYRMRQNPSSDTNS---------EKRSTFNAKDILESLG 346
+R N N ++R +F+ ++IL+ G
Sbjct: 284 LFRKDPNAEGRYNLYTADGKYIFKERESFDGRNILKGSG 322
>FB|FBgn0033475 [details] [associations]
symbol:CG12129 species:7227 "Drosophila melanogaster"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR009097
InterPro:IPR009210 Pfam:PF00013 PIRSF:PIRSF027019 PROSITE:PS50084
SMART:SM00322 EMBL:AE013599 GO:GO:0005737 GO:GO:0003824
GO:GO:0006355 GO:GO:0003723 GO:GO:0016070 InterPro:IPR019510
Pfam:PF10469 SUPFAM:SSF55144 eggNOG:NOG237734
GeneTree:ENSGT00390000018119 OMA:PTHFLAV EMBL:AY118329
RefSeq:NP_610545.1 UniGene:Dm.11398 SMR:Q7JW66 IntAct:Q7JW66
STRING:Q7JW66 EnsemblMetazoa:FBtr0088395 GeneID:36044
KEGG:dme:Dmel_CG12129 UCSC:CG12129-RA FlyBase:FBgn0033475
InParanoid:Q7JW66 OrthoDB:EOG49W0X4 GenomeRNAi:36044 NextBio:796537
Uniprot:Q7JW66
Length = 352
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 114/359 (31%), Positives = 194/359 (54%)
Query: 19 DVVNPKIE-IIDGRRYRVNPSWPSTYEDKSEADPYQRSEYDAGCPGGNQPYXXXXXXXXX 77
+V++P ++ + RRYRVN DK QR++ + Y
Sbjct: 4 EVLSPPVQKMSQNRRYRVNVVHDDFGGDKWNGQN-QRNKLEYKAYEEPDLYGDDDDDEDD 62
Query: 78 XXXXXIYLGKDGQYKYQCHIPKSFYPFIIGVKGSTKRRIESETNTQLSIPRQG-QTGDII 136
I +G + H+ KSFY +IG+KGSTKRRIE ET T++ +PR ++ ++
Sbjct: 63 AVVKCIKESANGDFSLSIHVSKSFYGGLIGMKGSTKRRIEEETRTEIFVPRPNDRSNEVT 122
Query: 137 ISSYSERGIASAKRRLDLLLVFARKKIPYTHLLSIPMNVPNIQENFAKFKATVLSDFSRC 196
I + + +A R++ L+ RKK+ TH L++ +N ++E F + K +L +
Sbjct: 123 IKAKQRSQVCAALRQIHHLVASLRKKMKPTHFLAVALNSGEVKERFMELKKCILE--AEL 180
Query: 197 RGIEESLFQEPGRLHITMGMLMLADSVERDQAVEVLQKCGNNIILPILRSQRIKINLKGL 256
GI++ LF +H+T+G+ +L D +ER +A++ L+ C +L L+ +I +KGL
Sbjct: 181 PGIDKELFTPECCIHLTLGVYVLLDDIERQEALKNLESCRR--LLDGLKIP-FQIKVKGL 237
Query: 257 EIMNDDPAEVDILYAKVVDDSGLVQKLCDDVVQYFISQHLISKAYQKYDTVKMHVTLMNS 316
EIMNDDP+ ILYA++ +S +QK D + +F + L + + +++K+H+T+MN+
Sbjct: 238 EIMNDDPSSTRILYARI--ESPDLQKFADQCLAHFQTTALCATDNIERESIKLHMTVMNN 295
Query: 317 KYRMRQNPSSDTNSEKRSTFNAKDILESLGDFEFGETFVYCVHLSQRHTHDMDGYFKPS 375
+YR + N S NS F+A++IL+ GDF+FG VHL ++ D ++K S
Sbjct: 296 RYRNKANKSG--NS-----FDAREILKRFGDFDFGVAQCQAVHLCVLNSRSEDEFYKIS 347
>UNIPROTKB|H0YCB3 [details] [associations]
symbol:ASCC1 "Activating signal cointegrator 1 complex
subunit 1" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR004088 InterPro:IPR009210 Pfam:PF13014
PIRSF:PIRSF027019 PROSITE:PS50084 GO:GO:0005737 GO:GO:0006355
GO:GO:0003723 InterPro:IPR019510 Pfam:PF10469 EMBL:AL607035
EMBL:AC022392 HGNC:HGNC:24268 Ensembl:ENST00000486689
Uniprot:H0YCB3
Length = 292
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 97/254 (38%), Positives = 155/254 (61%)
Query: 102 YPFIIGVKGSTKRRIESETNTQLSIPRQGQTGDIIISSYSERGIASAKRRLDLLLVFARK 161
Y I+G +G T+++IE ET T +SIP+ GQ G+I+I+ G+ SA+ R+D+LL R+
Sbjct: 2 YKHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVITGQHRNGVISARTRIDVLLDTFRR 61
Query: 162 KIPYTHLLSIPMNVPNIQENFAKFKATVLSDFSRCRGIEESLFQEPGRLHITMGMLMLAD 221
K P+TH L+ +N +QE F +F+ VL+ S G++ S+FQ P +LH+T+GML+L
Sbjct: 62 KQPFTHFLAFFLNEVEVQEGFLRFQEEVLAKCSMDHGVDSSIFQNPKKLHLTIGMLVLLS 121
Query: 222 SVERDQAVEVLQKCGNNIILPILRSQRIKINLKGLEIMNDDPAEVDILYAKV--VDDSGL 279
E Q E+LQ+C I I + +++ + G+E MNDDP VD+LYAKV D S
Sbjct: 122 EEEIQQTCEMLQQCKEEFINDISGGKPLEVEMAGIEYMNDDPGMVDVLYAKVHMKDGSNR 181
Query: 280 VQKLCDDVVQYFISQHLISKAYQKYDTVKMHVTLMNSKYRMRQNPSSDTNS--------- 330
+Q+L D V++ F + LI K ++++VK+H T+MN+ +R N N
Sbjct: 182 LQELVDRVLERFQASGLIVK---EWNSVKLHATVMNTLFRKDPNAEGRYNLYTAEGKYIF 238
Query: 331 EKRSTFNAKDILES 344
++R +F+ ++IL+S
Sbjct: 239 KERESFDGRNILKS 252
>WB|WBGene00016019 [details] [associations]
symbol:C23H3.3 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR009210 Pfam:PF00013 PIRSF:PIRSF027019 SMART:SM00322
GO:GO:0005737 GO:GO:0040010 GO:GO:0006355 GO:GO:0003723
InterPro:IPR019510 Pfam:PF10469 eggNOG:NOG237734
GeneTree:ENSGT00390000018119 EMBL:FO080632 RefSeq:NP_001122591.1
ProteinModelPortal:A9Z1L6 SMR:A9Z1L6 STRING:A9Z1L6 PaxDb:A9Z1L6
EnsemblMetazoa:C23H3.3b GeneID:182817 KEGG:cel:CELE_C23H3.3
UCSC:C23H3.3a CTD:182817 WormBase:C23H3.3b HOGENOM:HOG000018220
InParanoid:A9Z1L6 OMA:PTHFLAV NextBio:918946 ArrayExpress:A9Z1L6
Uniprot:A9Z1L6
Length = 393
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 96/299 (32%), Positives = 159/299 (53%)
Query: 96 HIPKSFYPFIIGVKGSTKRRIESETNTQLSIPRQGQTGDIIISSYSERGIASAKRRLDLL 155
++ F +IG T +E+ET ++ PR+ + ISS + +R LD L
Sbjct: 106 NVAPCFIGKLIGTNRRTLNSLENETQCRVKTPRRNENIACEISSIVS--LECVQRCLDRL 163
Query: 156 LVF---ARKKIPYTHLLSIPMNVPNIQENFAKFKATVL-SDF--SRCRGIEESLFQEPGR 209
+F +RK H +++P + +QENF FK V+ SD S C+ + LF +P R
Sbjct: 164 EIFIDDSRKTARVNHFVALPCDQHEVQENFNIFKQMVMESDHFDSSCKNSQ--LFTKPTR 221
Query: 210 LHITMGMLMLADSVERDQAV---EVLQKCGNNIILPILRSQRIKINLKGLEIMNDDPAEV 266
LH+T+ + + D ++ +AV E+L+K I I S+ + +++G+++MNDDP++V
Sbjct: 222 LHLTLSVARIFDDMDLQKAVGAFEILEK----EIRQIKDSKPLIADIQGIDMMNDDPSQV 277
Query: 267 DILYAKVVDDSGLVQKLCDDVVQYFISQHLISKAYQKY--DTVKMHVTLMNSKYRMRQNP 324
+LYAKV D VQ++ + V + I + SK D VK+H+TLMNS+Y + Q+
Sbjct: 278 FVLYAKVKGDK--VQEVANYVNRRLIELGVSSKNEHDNGSDAVKLHMTLMNSRY-VTQSE 334
Query: 325 SSDTNSEKRSTFNAKDILESLGDFEFG--ETFVYCVHLSQRHTHDMDG-YFKPSAVISL 380
S S++ + F+AK +LE L D FG E C+ ++ DG ++ A+I L
Sbjct: 335 KSG-KSKEAALFDAKQVLEDLKDSYFGTFELKEICLCPMSSNSQTSDGKFYDKLAIIKL 392
>UNIPROTKB|J9NUQ6 [details] [associations]
symbol:ASCC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR009210 PIRSF:PIRSF027019 GO:GO:0005737 GO:GO:0006355
InterPro:IPR019510 Pfam:PF10469 GeneTree:ENSGT00390000018119
EMBL:AAEX03002823 EMBL:AAEX03002822 Ensembl:ENSCAFT00000044146
Uniprot:J9NUQ6
Length = 195
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 66/186 (35%), Positives = 108/186 (58%)
Query: 198 GIEESLFQEPGRLHITMGMLMLADSVERDQAVEVLQKCGNNIILPILRSQRIKINLKGLE 257
G++ ++FQ P +LH+T+GML+L E Q E+LQ+C I I + +++ + G+E
Sbjct: 4 GVDSTIFQNPKKLHLTIGMLVLLSEQEIQQTCEMLQQCKEEFIDDISGGKPLEVEMAGIE 63
Query: 258 IMNDDPAEVDILYAKV--VDDSGLVQKLCDDVVQYFISQHLISKAYQKYDTVKMHVTLMN 315
MNDDP VD+LYAKV D S +Q+L D V++ F + LI K ++++VK+H T+MN
Sbjct: 64 YMNDDPGMVDVLYAKVHMKDGSNRLQELVDRVLERFQASGLIVK---EWNSVKLHATVMN 120
Query: 316 SKYRMRQNPSSDTNS---------EKRSTFNAKDILESLGDFEFGETFVYCVHLSQRHTH 366
+ +R N N ++R +F+ ++IL+ +F FG + +H+SQR T
Sbjct: 121 TLFRKDPNAEGRYNLYTADGKYIFKERESFDGRNILKLFENFYFGTLKLNSIHISQRFTV 180
Query: 367 DMDGYF 372
D G +
Sbjct: 181 DSFGNY 186
>UNIPROTKB|E9PSA3 [details] [associations]
symbol:ASCC1 "Activating signal cointegrator 1 complex
subunit 1" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR009210 PIRSF:PIRSF027019
GO:GO:0005737 GO:GO:0006355 InterPro:IPR019510 Pfam:PF10469
EMBL:AL607035 EMBL:AC022392 HGNC:HGNC:24268 IPI:IPI00980206
ProteinModelPortal:E9PSA3 SMR:E9PSA3 Ensembl:ENST00000530431
ArrayExpress:E9PSA3 Bgee:E9PSA3 Uniprot:E9PSA3
Length = 134
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 52/133 (39%), Positives = 82/133 (61%)
Query: 119 ETNTQLSIPRQGQTGDIIISSYSERGIASAKRRLDLLLVFARKKIPYTHLLSIPMNVPNI 178
ET T +SIP+ GQ G+I+I+ G+ SA+ R+D+LL R+K P+TH L+ +N +
Sbjct: 2 ETKTSISIPKPGQDGEIVITGQHRNGVISARTRIDVLLDTFRRKQPFTHFLAFFLNEVEV 61
Query: 179 QENFAKFKATVLSDFSRCRGIEESLFQEPGRLHITMGMLMLADSVERDQAVEVLQKCGNN 238
QE F +F+ VL+ S G++ S+FQ P +LH+T+GML+L E Q E+LQ+C
Sbjct: 62 QEGFLRFQEEVLAKCSMDHGVDSSIFQNPKKLHLTIGMLVLLSEEEIQQTCEMLQQCKEE 121
Query: 239 IILPILRSQRIKI 251
I I + +++
Sbjct: 122 FINDISGGKPLEV 134
>UNIPROTKB|E9PR40 [details] [associations]
symbol:ASCC1 "Activating signal cointegrator 1 complex
subunit 1" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR009210 PIRSF:PIRSF027019
GO:GO:0005737 GO:GO:0006355 InterPro:IPR019510 Pfam:PF10469
EMBL:AL607035 EMBL:AC022392 HGNC:HGNC:24268 IPI:IPI00982841
ProteinModelPortal:E9PR40 SMR:E9PR40 Ensembl:ENST00000531048
ArrayExpress:E9PR40 Bgee:E9PR40 Uniprot:E9PR40
Length = 139
Score = 209 (78.6 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 40/100 (40%), Positives = 63/100 (63%)
Query: 136 IISSYSERGIASAKRRLDLLLVFARKKIPYTHLLSIPMNVPNIQENFAKFKATVLSDFSR 195
+I+ G+ SA+ R+D+LL R+K P+TH L+ +N +QE F +F+ VL+ S
Sbjct: 38 VITGQHRNGVISARTRIDVLLDTFRRKQPFTHFLAFFLNEVEVQEGFLRFQEEVLAKCSM 97
Query: 196 CRGIEESLFQEPGRLHITMGMLMLADSVERDQAVEVLQKC 235
G++ S+FQ P +LH+T+GML+L E Q E+LQ+C
Sbjct: 98 DHGVDSSIFQNPKKLHLTIGMLVLLSEEEIQQTCEMLQQC 137
Score = 76 (31.8 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 19 DVVNPKIEIIDGRRYRVNPSWPSTYE-DKSEADPYQ 53
+V+ P++ IDGR YR NP TY+ ++ E D YQ
Sbjct: 2 EVLRPQLIRIDGRNYRKNPVQEQTYQHEEDEEDFYQ 37
>UNIPROTKB|F1SU93 [details] [associations]
symbol:F1SU93 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR009210 PIRSF:PIRSF027019 GO:GO:0005737 GO:GO:0006355
InterPro:IPR019510 Pfam:PF10469 GeneTree:ENSGT00390000018119
EMBL:CU607002 Ensembl:ENSSSCT00000011257 Uniprot:F1SU93
Length = 141
Score = 243 (90.6 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 47/126 (37%), Positives = 76/126 (60%)
Query: 136 IISSYSERGIASAKRRLDLLLVFARKKIPYTHLLSIPMNVPNIQENFAKFKATVLSDFSR 195
+I+ G+ SA+ R+D+LL+ R+K P+TH L+ +N +QE F KF+ VL S
Sbjct: 16 VITGQHRSGVISARTRIDVLLLTFRRKQPFTHFLAFFLNEVEVQERFLKFQEEVLEKCSM 75
Query: 196 CRGIEESLFQEPGRLHITMGMLMLADSVERDQAVEVLQKCGNNIILPILRSQRIKINLKG 255
G++ ++FQ P +LH+T+GML+L E Q E+LQ+C I I + +++ + G
Sbjct: 76 DHGVDSTIFQNPKKLHLTIGMLVLLSEQEIQQTCEMLQQCKEEFIDDISGGKPLEVEMAG 135
Query: 256 LEIMND 261
+E MND
Sbjct: 136 IEYMND 141
>UNIPROTKB|E9PQZ6 [details] [associations]
symbol:ASCC1 "Activating signal cointegrator 1 complex
subunit 1" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR009210
Pfam:PF00013 PIRSF:PIRSF027019 PROSITE:PS50084 SMART:SM00322
GO:GO:0005737 GO:GO:0006355 GO:GO:0003723 EMBL:AL607035
EMBL:AC022392 HGNC:HGNC:24268 IPI:IPI00977436
ProteinModelPortal:E9PQZ6 SMR:E9PQZ6 Ensembl:ENST00000527593
ArrayExpress:E9PQZ6 Bgee:E9PQZ6 Uniprot:E9PQZ6
Length = 152
Score = 229 (85.7 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 56/167 (33%), Positives = 87/167 (52%)
Query: 19 DVVNPKIEIIDGRRYRVNPSWPSTYE-DKSEADPYQRSEYDAGCPGGNQPYXXXXXXXXX 77
+V+ P++ IDGR YR NP TY+ ++ E D YQ S C ++P
Sbjct: 2 EVLRPQLIRIDGRNYRKNPVQEQTYQHEEDEEDFYQGS---MEC--ADEPCDAYEVEQT- 55
Query: 78 XXXXXIYLGKDGQYKYQCHIPKSFYPFIIGVKGSTKRRIESETNTQLSIPRQGQTGDIII 137
G ++ P Y I+G +G T+++IE ET T +SIP+ GQ G+I+I
Sbjct: 56 ---------PQG-FRSTLRAPSLLYKHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVI 105
Query: 138 SSYSERGIASAKRRLDLLLVFARKKIPYTHLLSIPMNVPNIQENFAK 184
+ G+ SA+ R+D+LL R+K P+TH L+ +N +QE F +
Sbjct: 106 TGQHRNGVISARTRIDVLLDTFRRKQPFTHFLAFFLNEVEVQEGFLR 152
>TAIR|locus:2094907 [details] [associations]
symbol:AT3G16220 "AT3G16220" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR009210
PIRSF:PIRSF027019 GO:GO:0005737 EMBL:CP002686 GO:GO:0006355
InterPro:IPR019510 Pfam:PF10469 EMBL:BT012638 IPI:IPI00536656
RefSeq:NP_188243.2 UniGene:At.38926 ProteinModelPortal:Q6NKQ6
PRIDE:Q6NKQ6 EnsemblPlants:AT3G16220.1 GeneID:820868
KEGG:ath:AT3G16220 TAIR:At3g16220 HOGENOM:HOG000030367
InParanoid:Q6NKQ6 OMA:REAHISQ PhylomeDB:Q6NKQ6 ProtClustDB:PLN00108
Genevestigator:Q6NKQ6 Uniprot:Q6NKQ6
Length = 257
Score = 225 (84.3 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 65/221 (29%), Positives = 115/221 (52%)
Query: 165 YTHLLSIPMNV-PNIQENFAKFKATVLSD-------FSRC---RGIEESLFQEPGRLHIT 213
+TH +S+P+ + P++ +N F+ +VL + F GIE+S+F P H+T
Sbjct: 36 FTHFVSLPLAIYPDLTKNIEAFQNSVLGNNDKDPLKFQSTLAEMGIEKSIFVTPKTFHLT 95
Query: 214 MGMLMLADSVERDQAVEVLQKCGNNIILPILRSQRIKINLKGLEIMNDDPAEVDILYAKV 273
+ ML L ++ +A +LQ +N+ L+++ + I L+GLE M+ + +LYA V
Sbjct: 96 VVMLKLENNESVVKAQNILQSIFSNV-RQALKNRPVFIRLRGLECMSGSLDKTRVLYAPV 154
Query: 274 --VDDSGLVQKLCDDVVQYFISQHLISKAYQKYDTVKMHVTLMNSKYRMRQNPSSDTNSE 331
V G + C ++ F + K + +K+H TLMN+ YR D S+
Sbjct: 155 EEVGREGRLLNACHVIIDAFENVGFAGKDAKS--RLKLHATLMNASYR------KD-KSK 205
Query: 332 KRSTFNAKDILESLGDFEFGETFVYCVHLSQRHTHDMDGYF 372
K TF+A++I + + ++G + H+SQR+ +D +GYF
Sbjct: 206 KMDTFDAREIHKEFENKDWGTYLIREAHISQRYKYDPNGYF 246
>UNIPROTKB|E9PM82 [details] [associations]
symbol:ASCC1 "Activating signal cointegrator 1 complex
subunit 1" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0003723 EMBL:AL607035
EMBL:AC022392 HGNC:HGNC:24268 IPI:IPI00983035
ProteinModelPortal:E9PM82 SMR:E9PM82 Ensembl:ENST00000530461
ArrayExpress:E9PM82 Bgee:E9PM82 Uniprot:E9PM82
Length = 124
Score = 213 (80.0 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 40/97 (41%), Positives = 62/97 (63%)
Query: 98 PKSFYPFIIGVKGSTKRRIESETNTQLSIPRQGQTGDIIISSYSERGIASAKRRLDLLLV 157
P Y I+G +G T+++IE ET T +SIP+ GQ G+I+I+ G+ SA+ R+D+LL
Sbjct: 27 PSLLYKHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVITGQHRNGVISARTRIDVLLD 86
Query: 158 FARKKIPYTHLLSIPMNVPNIQENFAKFKATVLSDFS 194
R+K P+TH L+ +N +QE F +F+ VL+ S
Sbjct: 87 TFRRKQPFTHFLAFFLNEVEVQEGFLRFQEEVLAKCS 123
>UNIPROTKB|H0YE76 [details] [associations]
symbol:ASCC1 "Activating signal cointegrator 1 complex
subunit 1" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR009210 PIRSF:PIRSF027019
GO:GO:0005737 GO:GO:0006355 InterPro:IPR019510 Pfam:PF10469
EMBL:AL607035 EMBL:AC022392 HGNC:HGNC:24268 Ensembl:ENST00000525286
Uniprot:H0YE76
Length = 176
Score = 208 (78.3 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 41/104 (39%), Positives = 63/104 (60%)
Query: 137 ISSYSERGIASAKRRLDLLLVFARKKIPYTHLLSIPMNVPNIQENFAKFKATVLSDFSRC 196
I+ G+ SA+ R+D+LL R+K P+TH L+ +N +QE F +F+ VL+ S
Sbjct: 2 ITGQHRNGVISARTRIDVLLDTFRRKQPFTHFLAFFLNEVEVQEGFLRFQEEVLAKCSMD 61
Query: 197 RGIEESLFQEPGRLHITMGMLMLADSVERDQAVEVLQKCGNNII 240
G++ S+FQ P +LH+T+GML+L E Q E+LQ+C I
Sbjct: 62 HGVDSSIFQNPKKLHLTIGMLVLLSEEEIQQTCEMLQQCKEEFI 105
>UNIPROTKB|E9PKM6 [details] [associations]
symbol:ASCC1 "Activating signal cointegrator 1 complex
subunit 1" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0003723 EMBL:AL607035
EMBL:AC022392 HGNC:HGNC:24268 IPI:IPI00983730
ProteinModelPortal:E9PKM6 SMR:E9PKM6 Ensembl:ENST00000524829
ArrayExpress:E9PKM6 Bgee:E9PKM6 Uniprot:E9PKM6
Length = 123
Score = 175 (66.7 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 45/138 (32%), Positives = 70/138 (50%)
Query: 19 DVVNPKIEIIDGRRYRVNPSWPSTYE-DKSEADPYQRSEYDAGCPGGNQPYXXXXXXXXX 77
+V+ P++ IDGR YR NP TY+ ++ E D YQ S C ++P
Sbjct: 2 EVLRPQLIRIDGRNYRKNPVQEQTYQHEEDEEDFYQGS---MEC--ADEPCDAYEVEQT- 55
Query: 78 XXXXXIYLGKDGQYKYQCHIPKSFYPFIIGVKGSTKRRIESETNTQLSIPRQGQTGDIII 137
G ++ P Y I+G +G T+++IE ET T +SIP+ GQ G+I+I
Sbjct: 56 ---------PQG-FRSTLRAPSLLYKHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVI 105
Query: 138 SSYSERGIASAKRRLDLL 155
+ G+ SA+ R+D+L
Sbjct: 106 TGQHRNGVISARTRIDVL 123
>UNIPROTKB|H0YER2 [details] [associations]
symbol:ASCC1 "Activating signal cointegrator 1 complex
subunit 1" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR009210 PIRSF:PIRSF027019
GO:GO:0005737 GO:GO:0006355 InterPro:IPR019510 Pfam:PF10469
EMBL:AL607035 EMBL:AC022392 HGNC:HGNC:24268 Ensembl:ENST00000530394
Uniprot:H0YER2
Length = 145
Score = 148 (57.2 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 33/83 (39%), Positives = 52/83 (62%)
Query: 249 IKINLKGLEIMNDDPAEVDILYAKV--VDDSGLVQKLCDDVVQYFISQHLISKAYQKYDT 306
+++ + G+E MNDDP VD+LYAKV D S +Q+L D V++ F + LI K ++++
Sbjct: 15 LEVEMAGIEYMNDDPGMVDVLYAKVHMKDGSNRLQELVDRVLERFQASGLIVK---EWNS 71
Query: 307 VKMHVTLMNSKYRMRQNPSSDTN 329
VK+H T+MN+ +R N N
Sbjct: 72 VKLHATVMNTLFRKDPNAEGRYN 94
>UNIPROTKB|E9PL92 [details] [associations]
symbol:ASCC1 "Activating signal cointegrator 1 complex
subunit 1" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
GO:GO:0003723 EMBL:AL607035 EMBL:AC022392 HGNC:HGNC:24268
IPI:IPI00976790 ProteinModelPortal:E9PL92 SMR:E9PL92
Ensembl:ENST00000526751 ArrayExpress:E9PL92 Bgee:E9PL92
Uniprot:E9PL92
Length = 103
Score = 134 (52.2 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 38/118 (32%), Positives = 57/118 (48%)
Query: 19 DVVNPKIEIIDGRRYRVNPSWPSTYE-DKSEADPYQRSEYDAGCPGGNQPYXXXXXXXXX 77
+V+ P++ IDGR YR NP TY+ ++ E D YQ S C ++P
Sbjct: 2 EVLRPQLIRIDGRNYRKNPVQEQTYQHEEDEEDFYQGS---MEC--ADEPCDAYEVEQT- 55
Query: 78 XXXXXIYLGKDGQYKYQCHIPKSFYPFIIGVKGSTKRRIESETNTQLSIPRQGQTGDI 135
G ++ P Y I+G +G T+++IE ET T +SIP+ GQ G+I
Sbjct: 56 ---------PQG-FRSTLRAPSLLYKHIVGKRGDTRKKIEMETKTSISIPKPGQDGEI 103
>UNIPROTKB|H0YE79 [details] [associations]
symbol:ASCC1 "Activating signal cointegrator 1 complex
subunit 1" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004088 Pfam:PF00013 GO:GO:0003723
EMBL:AL607035 EMBL:AC022392 HGNC:HGNC:24268 Ensembl:ENST00000461369
Uniprot:H0YE79
Length = 70
Score = 93 (37.8 bits), Expect = 0.00074, P = 0.00074
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 105 IIGVKGSTKRRIESETNTQLSIPRQGQTGDI 135
I+G +G T+++IE ET T +SIP+ GQ G+I
Sbjct: 31 IVGKRGDTRKKIEMETKTSISIPKPGQDGEI 61
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 380 366 0.00084 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 601 (64 KB)
Total size of DFA: 231 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.58u 0.18s 29.76t Elapsed: 00:00:02
Total cpu time: 29.58u 0.18s 29.76t Elapsed: 00:00:02
Start: Thu Aug 15 15:07:35 2013 End: Thu Aug 15 15:07:37 2013