BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2083
(248 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NVM6|NOL10_XENTR Nucleolar protein 10 OS=Xenopus tropicalis GN=nol10 PE=2 SV=1
Length = 686
Score = 254 bits (650), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 151/193 (78%), Gaps = 4/193 (2%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHD--NYVLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R+++PL KDH YGLPI+ I+FH + V+S DS ++K+W+KDNG +FT IE +
Sbjct: 255 LYDLRSNRPLIAKDHQYGLPIKSIQFHSALDLVISADSRIIKMWNKDNGKIFTSIEP--E 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDD 173
N++C P SGM+F ANE K+ YYIP+LGPAP+WC FLDNLTEELEEN VYDD
Sbjct: 313 ADVNDVCLYPNSGMLFTANEAPKMNVYYIPALGPAPRWCSFLDNLTEELEENPESTVYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRER 233
YKFVTR+EL++LGL HLIG+ LLRAYMHGFFMDIRLY K K++ PF +EE+KK+KIR++
Sbjct: 373 YKFVTRKELDELGLSHLIGSPLLRAYMHGFFMDIRLYHKVKAMVNPFAYEEYKKEKIRQK 432
Query: 234 IEQERTRGVQLNE 246
IE+ R + VQ+ +
Sbjct: 433 IEEARAQRVQIKK 445
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 8 QDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAF 54
+D G +FT IE + N++C P SGM+F ANE K+ YYIPA
Sbjct: 300 KDNGKIFTSIEP--EADVNDVCLYPNSGMLFTANEAPKMNVYYIPAL 344
>sp|Q802W4|NOL10_DANRE Nucleolar protein 10 OS=Danio rerio GN=nol10 PE=2 SV=1
Length = 722
Score = 254 bits (650), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 151/193 (78%), Gaps = 4/193 (2%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHD--NYVLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
+YD+R+ +PL VKDH YGLPI+ + FH+ + VLS DS ++K+W+KDNG +F+ IE Q
Sbjct: 255 VYDLRSSRPLLVKDHYYGLPIKSLHFHNSLDLVLSADSKIIKMWNKDNGKVFSSIEP--Q 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDD 173
N++C P SGM+F ANE+ K+ T+YIP+LGPAP+WC FLDNLTEELEEN +YDD
Sbjct: 313 ANINDVCLYPASGMLFTANEDPKMNTFYIPALGPAPRWCSFLDNLTEELEENPESTIYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRER 233
YKFVTR++LE LGL HLIG+ LLRAYMHGFFMDIRLY K K++ PF +EE++K KIR++
Sbjct: 373 YKFVTRKDLESLGLAHLIGSPLLRAYMHGFFMDIRLYHKVKTMVNPFAYEEYRKDKIRQK 432
Query: 234 IEQERTRGVQLNE 246
IE+ R + VQL +
Sbjct: 433 IEESRAQRVQLKK 445
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 8 QDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAF 54
+D G +F+ IE Q N++C P SGM+F ANE+ K+ T+YIPA
Sbjct: 300 KDNGKVFSSIEP--QANINDVCLYPASGMLFTANEDPKMNTFYIPAL 344
>sp|Q7T0Q5|NOL10_XENLA Nucleolar protein 10 OS=Xenopus laevis GN=nol10 PE=2 SV=1
Length = 689
Score = 254 bits (649), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 152/193 (78%), Gaps = 4/193 (2%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHD--NYVLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R+++P+ VKDH YGLPI+ I+FH + V+S DS ++K+W+KDNG +FT IE +
Sbjct: 255 LYDLRSNRPVIVKDHQYGLPIKSIQFHSALDLVISADSRIIKMWNKDNGKIFTSIEP--E 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDD 173
N++C P SGM+F ANE K+ YYIP+LGPAP+WC FLDNLTEELEEN VYDD
Sbjct: 313 ADVNDVCLYPNSGMLFTANEAPKMNVYYIPALGPAPRWCSFLDNLTEELEENPENTVYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRER 233
YKFVTR+EL++LGL HLIG+ +LRAYMHGFFMDIRLY K K++ PF +EE+KK+KIR++
Sbjct: 373 YKFVTRKELDELGLSHLIGSPMLRAYMHGFFMDIRLYHKVKAMVNPFAYEEYKKEKIRQK 432
Query: 234 IEQERTRGVQLNE 246
IE+ R + VQ+ +
Sbjct: 433 IEETRAQRVQIKK 445
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 8 QDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAF 54
+D G +FT IE + N++C P SGM+F ANE K+ YYIPA
Sbjct: 300 KDNGKIFTSIEP--EADVNDVCLYPNSGMLFTANEAPKMNVYYIPAL 344
>sp|Q5RJG1|NOL10_MOUSE Nucleolar protein 10 OS=Mus musculus GN=Nol10 PE=2 SV=1
Length = 687
Score = 247 bits (630), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 147/193 (76%), Gaps = 4/193 (2%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHD--NYVLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R+DKPL VKDH YGLPI+ + F D + VLS DS +VK+W+KD+G +FT +E +
Sbjct: 255 LYDLRSDKPLLVKDHQYGLPIKSVHFQDSLDLVLSADSRIVKMWNKDSGKIFTSLEP--E 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDD 173
N++C P SGM+ ANE+ K+ YYIP LGPAP+WC FLDNLTEELEEN VYDD
Sbjct: 313 HDLNDVCLYPSSGMLLTANESPKMGIYYIPVLGPAPRWCSFLDNLTEELEENPESTVYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRER 233
YKFVT+++LE+LGL HLIG+ LRAYMHGFFMDIRLY K K + PF +EE++K KIR++
Sbjct: 373 YKFVTKKDLENLGLTHLIGSPFLRAYMHGFFMDIRLYHKVKLMVNPFAYEEYRKDKIRQK 432
Query: 234 IEQERTRGVQLNE 246
IE+ R + VQL +
Sbjct: 433 IEETRAQRVQLKK 445
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 8 QDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAF 54
+D G +FT +E + N++C P SGM+ ANE+ K+ YYIP
Sbjct: 300 KDSGKIFTSLEP--EHDLNDVCLYPSSGMLLTANESPKMGIYYIPVL 344
>sp|Q66H99|NOL10_RAT Nucleolar protein 10 OS=Rattus norvegicus GN=Nol10 PE=2 SV=1
Length = 688
Score = 246 bits (629), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 147/193 (76%), Gaps = 4/193 (2%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHD--NYVLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R+DKPL VKDH YGLPI+ + F D + VLS DS +VK+W+KD+G +FT +E +
Sbjct: 255 LYDLRSDKPLLVKDHQYGLPIKSVHFQDSLDLVLSADSRIVKMWNKDSGKIFTSLEP--E 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDD 173
N++C P SGM+ ANE+ K+ YYIP LGPAP+WC FLDNLTEELEEN VYDD
Sbjct: 313 HDLNDVCLYPSSGMILTANESPKMGIYYIPVLGPAPRWCSFLDNLTEELEENPESTVYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRER 233
YKFVT+++LE+LGL HLIG+ LRAYMHGFFMDIRLY K K + PF +EE++K KIR++
Sbjct: 373 YKFVTKKDLENLGLTHLIGSPFLRAYMHGFFMDIRLYHKVKLMVNPFAYEEYRKDKIRQK 432
Query: 234 IEQERTRGVQLNE 246
IE+ R + VQL +
Sbjct: 433 IEETRAQRVQLKK 445
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 8 QDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAF 54
+D G +FT +E + N++C P SGM+ ANE+ K+ YYIP
Sbjct: 300 KDSGKIFTSLEP--EHDLNDVCLYPSSGMILTANESPKMGIYYIPVL 344
>sp|Q9BSC4|NOL10_HUMAN Nucleolar protein 10 OS=Homo sapiens GN=NOL10 PE=1 SV=1
Length = 688
Score = 244 bits (622), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 146/193 (75%), Gaps = 4/193 (2%)
Query: 56 LYDIRADKPLRVKDHMYGLPIRDIKFHD--NYVLSMDSSVVKIWSKDNGSLFTCIESGDQ 113
LYD+R+DKPL VKDH YGLPI+ + F D + +LS DS +VK+W+K++G +FT +E +
Sbjct: 255 LYDLRSDKPLLVKDHQYGLPIKSVHFQDSLDLILSADSRIVKMWNKNSGKIFTSLEP--E 312
Query: 114 TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDD 173
N++C P SGM+ ANE K+ YYIP LGPAP+WC FLDNLTEELEEN VYDD
Sbjct: 313 HDLNDVCLYPNSGMLLTANETPKMGIYYIPVLGPAPRWCSFLDNLTEELEENPESTVYDD 372
Query: 174 YKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRER 233
YKFVT+++LE+LGL HLIG+ LRAYMHGFFMDIRLY K K + PF +EE++K KIR++
Sbjct: 373 YKFVTKKDLENLGLTHLIGSPFLRAYMHGFFMDIRLYHKVKLMVNPFAYEEYRKDKIRQK 432
Query: 234 IEQERTRGVQLNE 246
IE+ R + VQL +
Sbjct: 433 IEETRAQRVQLKK 445
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 8 QDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAF 54
++ G +FT +E + N++C P SGM+ ANE K+ YYIP
Sbjct: 300 KNSGKIFTSLEP--EHDLNDVCLYPNSGMLLTANETPKMGIYYIPVL 344
>sp|O74879|NOL10_SCHPO Ribosome biogenesis protein enp2 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=enp2 PE=1 SV=1
Length = 634
Score = 204 bits (520), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 134/197 (68%), Gaps = 8/197 (4%)
Query: 53 AFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY------VLSMDSSVVKIWSKDNGSLFT 106
A LYD+R+ P KD Y +PI+ + + D+ VLS DS ++KIW KD G F+
Sbjct: 260 ATLLYDLRSSSPYMSKDQGYSMPIKSLHWMDSALDGTARVLSADSKIIKIWEKDTGKPFS 319
Query: 107 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENI 166
IE + N++C I +G++ ANE + +YIPSL PAP+WC FLDN+TEE+EEN
Sbjct: 320 SIEP--TVELNDVCPIEGTGLILTANEGSPMHAFYIPSLNPAPRWCSFLDNITEEMEENP 377
Query: 167 IENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFK 226
+YDDYKFVT++EL +LGL HL+GT ++RAYMHGFF+D LY KA+ ++ PF +EE +
Sbjct: 378 APTIYDDYKFVTKKELLNLGLDHLVGTGVIRAYMHGFFIDNNLYEKARLIANPFSYEEHR 437
Query: 227 KKKIRERIEQERTRGVQ 243
+K ++ER+E++R ++
Sbjct: 438 QKIVKERLEKQRASKIR 454
Score = 35.4 bits (80), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 8 QDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAF 54
+D G F+ IE + N++C I +G++ ANE + +YIP+
Sbjct: 312 KDTGKPFSSIEP--TVELNDVCPIEGTGLILTANEGSPMHAFYIPSL 356
>sp|P48234|NOL10_YEAST Ribosome biogenesis protein ENP2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ENP2 PE=1 SV=2
Length = 707
Score = 164 bits (416), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 114/175 (65%), Gaps = 7/175 (4%)
Query: 55 YLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-----VLSMDSSVVKIWSKDNGSLFTCIE 109
Y+YD+R +P +KD YG I+ I + DN +++ D + KIW + +G + +E
Sbjct: 253 YIYDLRTSEPSIIKDQGYGFDIKKIIWLDNVGTENKIVTCDKRIAKIWDRLDGKAYASME 312
Query: 110 SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIEN 169
N++ H+P +GM F ANE+ + TYYIPSLGP+P+WC FLD++TEELEE +
Sbjct: 313 PS--VDINDIEHVPGTGMFFTANESIPMHTYYIPSLGPSPRWCSFLDSITEELEEKPSDT 370
Query: 170 VYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEE 224
VY +Y+F+TR +++ L L HL+G+ +LRAYMHGFF++ LY K ++ P +++
Sbjct: 371 VYSNYRFITRDDVKKLNLTHLVGSRVLRAYMHGFFINTELYDKVSLIANPDAYKD 425
Score = 37.7 bits (86), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAF 54
G + +E N++ H+P +GM F ANE+ + TYYIP+
Sbjct: 305 GKAYASMEPS--VDINDIEHVPGTGMFFTANESIPMHTYYIPSL 346
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,355,967
Number of Sequences: 539616
Number of extensions: 4063196
Number of successful extensions: 9539
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 9506
Number of HSP's gapped (non-prelim): 22
length of query: 248
length of database: 191,569,459
effective HSP length: 114
effective length of query: 134
effective length of database: 130,053,235
effective search space: 17427133490
effective search space used: 17427133490
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)