Query psy2083
Match_columns 248
No_of_seqs 217 out of 1171
Neff 6.6
Searched_HMMs 46136
Date Fri Aug 16 23:51:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2083.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2083hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2321|consensus 100.0 5.3E-76 1.2E-80 555.2 15.3 211 25-245 231-445 (703)
2 KOG0282|consensus 99.8 1.4E-20 2.9E-25 176.4 7.3 194 13-228 206-424 (503)
3 KOG0315|consensus 99.8 7.7E-18 1.7E-22 147.9 13.3 137 8-164 27-168 (311)
4 KOG0286|consensus 99.7 2.4E-17 5.1E-22 147.3 13.7 125 6-140 214-342 (343)
5 KOG0263|consensus 99.7 6.4E-17 1.4E-21 158.5 14.0 184 6-214 436-667 (707)
6 KOG0272|consensus 99.7 9.5E-18 2.1E-22 155.4 7.3 126 7-144 246-376 (459)
7 KOG0272|consensus 99.7 4.5E-17 9.7E-22 150.9 11.1 124 6-141 330-458 (459)
8 KOG0263|consensus 99.7 5.1E-17 1.1E-21 159.1 11.5 123 11-144 525-650 (707)
9 KOG0266|consensus 99.7 1.8E-16 3.8E-21 151.8 14.9 121 13-144 195-319 (456)
10 KOG0279|consensus 99.7 2E-16 4.3E-21 140.6 13.8 128 7-144 91-223 (315)
11 KOG0286|consensus 99.7 2.6E-16 5.7E-21 140.7 14.1 116 17-144 141-260 (343)
12 KOG0266|consensus 99.7 4.6E-16 1E-20 148.9 16.5 125 9-145 234-366 (456)
13 PTZ00421 coronin; Provisional 99.7 8.9E-16 1.9E-20 148.6 17.0 117 17-144 71-199 (493)
14 KOG0271|consensus 99.7 2E-16 4.3E-21 145.6 11.4 121 12-144 106-236 (480)
15 KOG0315|consensus 99.7 8.1E-16 1.8E-20 135.2 13.9 127 7-144 67-198 (311)
16 KOG0279|consensus 99.7 1.5E-15 3.3E-20 135.0 14.5 127 7-144 49-181 (315)
17 KOG0284|consensus 99.7 1.5E-16 3.2E-21 147.2 6.6 116 17-143 175-294 (464)
18 KOG0291|consensus 99.6 2.4E-15 5.3E-20 147.3 13.7 116 19-143 347-508 (893)
19 PTZ00420 coronin; Provisional 99.6 1.2E-14 2.6E-19 142.6 18.4 120 13-144 66-198 (568)
20 KOG0276|consensus 99.6 1E-15 2.3E-20 147.5 10.0 131 12-152 131-274 (794)
21 KOG0302|consensus 99.6 9.1E-15 2E-19 134.4 13.6 161 21-203 256-432 (440)
22 KOG0310|consensus 99.6 8.8E-15 1.9E-19 137.6 12.8 129 7-145 139-270 (487)
23 cd00200 WD40 WD40 domain, foun 99.6 2.8E-14 6E-19 119.8 14.5 124 6-141 162-289 (289)
24 KOG0265|consensus 99.6 7.9E-15 1.7E-19 131.5 11.2 134 6-150 117-253 (338)
25 KOG0271|consensus 99.6 5.1E-14 1.1E-18 129.8 14.6 127 7-144 143-277 (480)
26 KOG0273|consensus 99.6 4.6E-14 1E-18 132.5 12.8 121 13-144 351-483 (524)
27 PTZ00420 coronin; Provisional 99.6 2.3E-13 4.9E-18 133.7 18.3 121 14-146 118-251 (568)
28 PTZ00421 coronin; Provisional 99.6 2.4E-13 5.3E-18 131.7 18.3 124 12-146 116-248 (493)
29 KOG0278|consensus 99.5 7.7E-14 1.7E-18 123.0 13.2 114 21-144 142-298 (334)
30 cd00200 WD40 WD40 domain, foun 99.5 4.6E-13 9.9E-18 112.4 16.4 128 6-144 78-208 (289)
31 KOG0264|consensus 99.5 5.7E-14 1.2E-18 131.0 11.8 123 17-149 223-353 (422)
32 KOG0292|consensus 99.5 3.2E-14 7E-19 141.5 10.5 125 9-145 39-167 (1202)
33 KOG0289|consensus 99.5 4.4E-13 9.5E-18 125.1 14.4 126 7-141 331-460 (506)
34 PLN00181 protein SPA1-RELATED; 99.5 1.3E-12 2.8E-17 132.7 18.9 125 7-144 561-691 (793)
35 KOG0285|consensus 99.5 9.9E-14 2.1E-18 127.1 9.6 121 19-157 232-355 (460)
36 KOG0289|consensus 99.5 3.6E-13 7.7E-18 125.7 13.3 120 21-149 302-425 (506)
37 KOG0282|consensus 99.5 3.2E-14 6.9E-19 133.8 6.4 121 10-142 247-371 (503)
38 KOG0278|consensus 99.5 6.3E-14 1.4E-18 123.6 7.2 129 6-148 86-218 (334)
39 KOG1446|consensus 99.5 9.6E-13 2.1E-17 118.5 14.9 134 6-149 85-268 (311)
40 PLN00181 protein SPA1-RELATED; 99.5 1.7E-12 3.8E-17 131.7 17.9 126 7-143 604-738 (793)
41 KOG0295|consensus 99.5 6.2E-13 1.4E-17 121.8 13.0 127 7-145 221-366 (406)
42 KOG0283|consensus 99.5 2.1E-13 4.5E-18 134.6 10.6 117 17-144 262-441 (712)
43 KOG0285|consensus 99.5 4.1E-13 8.9E-18 123.1 11.7 128 6-144 178-308 (460)
44 KOG0316|consensus 99.5 4.6E-13 9.9E-18 117.3 11.4 126 3-141 83-211 (307)
45 KOG0319|consensus 99.5 4.5E-13 9.8E-18 131.2 12.5 116 19-144 460-578 (775)
46 KOG0316|consensus 99.5 9.4E-13 2E-17 115.4 13.2 123 16-149 12-137 (307)
47 KOG0319|consensus 99.4 9.5E-13 2.1E-17 128.9 12.5 123 8-141 492-617 (775)
48 KOG0276|consensus 99.4 1.7E-12 3.7E-17 125.6 13.9 162 6-189 82-255 (794)
49 KOG0275|consensus 99.4 1.4E-13 3E-18 125.1 5.4 112 22-142 263-377 (508)
50 KOG0296|consensus 99.4 1.3E-12 2.9E-17 119.7 11.7 129 6-144 260-399 (399)
51 KOG0645|consensus 99.4 7.8E-12 1.7E-16 111.2 16.0 121 13-143 6-135 (312)
52 KOG0291|consensus 99.4 1.8E-12 3.9E-17 127.4 13.1 148 7-165 464-638 (893)
53 KOG0318|consensus 99.4 4.7E-12 1E-16 120.5 15.3 117 20-144 188-351 (603)
54 KOG0265|consensus 99.4 2.1E-12 4.6E-17 116.0 11.9 120 19-148 44-168 (338)
55 KOG0643|consensus 99.4 2.9E-12 6.2E-17 113.9 12.5 127 8-146 39-223 (327)
56 KOG0647|consensus 99.4 2.5E-12 5.5E-17 115.7 11.6 114 22-144 27-146 (347)
57 KOG0277|consensus 99.4 4.3E-12 9.2E-17 112.2 12.5 171 13-206 53-238 (311)
58 KOG0300|consensus 99.4 2.3E-12 5E-17 117.0 11.0 127 6-143 299-428 (481)
59 KOG0273|consensus 99.4 4.7E-12 1E-16 119.2 13.0 119 11-142 391-522 (524)
60 KOG0294|consensus 99.4 4.1E-12 8.8E-17 114.9 11.9 115 14-142 36-156 (362)
61 KOG0295|consensus 99.4 4.2E-12 9.2E-17 116.4 11.7 117 22-141 277-404 (406)
62 KOG0640|consensus 99.4 2.5E-12 5.5E-17 116.3 9.8 118 13-141 164-289 (430)
63 KOG0274|consensus 99.4 1E-11 2.2E-16 121.5 14.5 125 7-145 277-402 (537)
64 KOG0645|consensus 99.4 2.3E-11 5E-16 108.2 15.1 119 12-141 96-223 (312)
65 KOG0281|consensus 99.4 9.5E-13 2.1E-17 120.5 6.4 165 7-193 263-430 (499)
66 KOG0274|consensus 99.4 1.8E-11 4E-16 119.7 15.8 125 6-143 233-359 (537)
67 KOG0772|consensus 99.4 2.5E-12 5.3E-17 122.3 9.1 162 14-191 206-394 (641)
68 KOG0641|consensus 99.3 2.5E-11 5.4E-16 106.2 14.4 159 10-191 172-349 (350)
69 KOG0313|consensus 99.3 1.2E-11 2.7E-16 113.9 12.5 122 10-144 249-377 (423)
70 KOG0283|consensus 99.3 5.3E-12 1.1E-16 124.8 10.6 119 13-145 361-483 (712)
71 KOG0264|consensus 99.3 1.5E-11 3.3E-16 114.9 12.6 123 13-144 264-405 (422)
72 KOG0277|consensus 99.3 1E-11 2.3E-16 109.7 10.5 139 7-166 133-278 (311)
73 KOG0646|consensus 99.3 1.8E-11 3.9E-16 115.0 12.1 125 9-145 111-249 (476)
74 KOG0643|consensus 99.3 1.8E-11 3.8E-16 108.9 11.3 124 10-142 136-316 (327)
75 KOG0269|consensus 99.3 4.2E-12 9.1E-17 125.0 8.0 123 12-144 124-251 (839)
76 KOG0310|consensus 99.3 1.4E-11 3.1E-16 116.1 11.0 127 6-144 95-226 (487)
77 KOG0292|consensus 99.3 4.2E-12 9E-17 126.7 7.8 118 14-142 2-122 (1202)
78 KOG0313|consensus 99.3 2.4E-11 5.2E-16 112.0 11.4 125 6-142 286-417 (423)
79 KOG1539|consensus 99.3 1.4E-11 3.1E-16 122.2 10.6 129 6-145 475-608 (910)
80 KOG0281|consensus 99.3 3.7E-12 8E-17 116.7 6.0 153 22-191 320-477 (499)
81 KOG0284|consensus 99.3 8.6E-12 1.9E-16 115.8 6.5 126 6-142 249-379 (464)
82 KOG0303|consensus 99.2 6E-11 1.3E-15 110.0 11.6 114 19-142 78-202 (472)
83 KOG0296|consensus 99.2 2E-10 4.4E-15 105.5 14.9 120 14-144 57-179 (399)
84 TIGR03866 PQQ_ABC_repeats PQQ- 99.2 5E-10 1.1E-14 97.5 15.8 125 6-143 16-145 (300)
85 KOG0772|consensus 99.2 5.7E-11 1.2E-15 113.1 10.0 119 20-145 266-396 (641)
86 KOG0305|consensus 99.2 9E-11 1.9E-15 112.8 11.4 152 20-193 299-463 (484)
87 KOG0640|consensus 99.2 5.4E-11 1.2E-15 107.8 9.1 114 23-144 217-336 (430)
88 KOG0275|consensus 99.2 2.7E-11 5.9E-16 110.3 6.6 126 7-142 291-422 (508)
89 KOG1188|consensus 99.2 1.3E-10 2.7E-15 106.2 10.9 130 6-144 55-197 (376)
90 TIGR03866 PQQ_ABC_repeats PQQ- 99.2 1.1E-09 2.3E-14 95.4 16.3 126 6-144 58-188 (300)
91 KOG0267|consensus 99.2 2.6E-11 5.6E-16 118.9 6.5 118 16-144 65-185 (825)
92 KOG0300|consensus 99.2 2.6E-11 5.5E-16 110.2 5.9 169 7-193 176-388 (481)
93 PF08662 eIF2A: Eukaryotic tra 99.2 9E-10 2E-14 94.4 15.1 116 14-142 51-178 (194)
94 KOG0293|consensus 99.2 1.4E-10 3E-15 108.2 10.4 116 17-142 220-341 (519)
95 KOG1446|consensus 99.2 6.1E-10 1.3E-14 100.5 13.7 111 22-143 14-130 (311)
96 KOG0301|consensus 99.2 6.2E-10 1.3E-14 108.9 14.2 119 10-144 168-289 (745)
97 KOG0269|consensus 99.2 1.3E-10 2.9E-15 114.6 9.7 124 7-142 162-295 (839)
98 KOG1036|consensus 99.1 3.9E-10 8.3E-15 101.7 11.7 110 22-143 13-124 (323)
99 KOG0293|consensus 99.1 1.7E-10 3.6E-15 107.6 9.5 173 12-205 260-442 (519)
100 KOG0647|consensus 99.1 5.8E-10 1.3E-14 100.6 12.5 109 20-142 70-183 (347)
101 KOG0308|consensus 99.1 2.4E-10 5.1E-15 111.2 10.7 122 13-144 109-244 (735)
102 KOG0268|consensus 99.1 7E-11 1.5E-15 108.6 6.6 126 6-143 215-345 (433)
103 KOG0270|consensus 99.1 8.8E-10 1.9E-14 103.3 13.8 127 6-146 271-407 (463)
104 KOG0301|consensus 99.1 3.3E-10 7.2E-15 110.8 10.9 118 11-143 130-249 (745)
105 KOG0305|consensus 99.1 1.5E-09 3.4E-14 104.4 15.1 127 12-148 334-466 (484)
106 KOG1036|consensus 99.1 1E-09 2.2E-14 99.1 12.8 111 22-147 54-167 (323)
107 KOG0318|consensus 99.1 1.1E-09 2.4E-14 104.5 13.7 124 9-145 135-267 (603)
108 KOG0267|consensus 99.1 5.5E-11 1.2E-15 116.7 4.9 126 7-143 98-226 (825)
109 KOG4378|consensus 99.1 8.9E-10 1.9E-14 104.8 12.1 130 6-145 148-282 (673)
110 KOG0306|consensus 99.1 4.9E-10 1.1E-14 110.5 10.6 208 6-235 439-683 (888)
111 KOG0973|consensus 99.1 9.8E-10 2.1E-14 111.5 13.0 146 5-168 53-219 (942)
112 KOG0973|consensus 99.1 1.3E-09 2.8E-14 110.6 13.4 122 10-142 118-311 (942)
113 KOG0288|consensus 99.1 1.3E-09 2.8E-14 101.6 12.1 124 6-143 288-417 (459)
114 KOG2445|consensus 99.1 3.1E-09 6.8E-14 96.2 14.2 133 15-163 6-159 (361)
115 KOG0299|consensus 99.1 3.2E-10 7E-15 106.5 8.1 150 20-192 200-357 (479)
116 KOG2096|consensus 99.1 1.5E-09 3.3E-14 98.7 12.0 111 17-142 82-307 (420)
117 KOG2055|consensus 99.1 1.9E-09 4.2E-14 101.6 13.0 128 6-144 330-513 (514)
118 KOG0306|consensus 99.1 7.8E-10 1.7E-14 109.1 10.4 120 12-142 541-663 (888)
119 KOG0288|consensus 99.1 1.8E-09 3.9E-14 100.6 12.2 125 6-140 327-458 (459)
120 KOG1007|consensus 99.0 7.2E-10 1.6E-14 99.7 8.9 118 23-149 171-295 (370)
121 KOG1407|consensus 99.0 3.5E-09 7.6E-14 94.1 12.3 163 6-187 92-257 (313)
122 KOG1034|consensus 99.0 1.2E-09 2.7E-14 99.4 9.4 90 52-143 115-211 (385)
123 KOG1407|consensus 99.0 3.7E-09 7.9E-14 94.0 11.9 120 12-143 180-311 (313)
124 KOG1274|consensus 99.0 4.1E-09 8.8E-14 105.8 13.2 129 6-143 123-262 (933)
125 COG2319 FOG: WD40 repeat [Gene 99.0 3.6E-08 7.7E-13 85.7 16.6 125 11-147 145-275 (466)
126 KOG2110|consensus 99.0 1.3E-08 2.9E-13 93.8 14.3 130 6-143 111-248 (391)
127 KOG0639|consensus 99.0 1.6E-09 3.4E-14 103.3 8.3 180 23-220 466-664 (705)
128 KOG1445|consensus 99.0 1.8E-09 3.9E-14 105.2 8.7 108 23-141 628-748 (1012)
129 KOG1310|consensus 99.0 2.3E-09 5.1E-14 103.0 9.1 135 15-163 44-194 (758)
130 KOG1445|consensus 99.0 2.4E-09 5.2E-14 104.4 8.9 118 16-144 74-201 (1012)
131 KOG0270|consensus 98.9 4.2E-09 9.1E-14 98.8 10.1 162 19-195 240-408 (463)
132 KOG1272|consensus 98.9 1.2E-09 2.5E-14 103.2 6.0 206 6-243 236-447 (545)
133 KOG0302|consensus 98.9 7E-09 1.5E-13 95.9 10.5 128 10-148 200-337 (440)
134 KOG4328|consensus 98.9 5.1E-09 1.1E-13 98.6 9.4 108 24-143 281-399 (498)
135 KOG1539|consensus 98.9 6.3E-09 1.4E-13 103.7 10.5 115 13-141 527-646 (910)
136 KOG0290|consensus 98.9 1.9E-08 4E-13 90.8 12.0 123 15-147 190-322 (364)
137 KOG1273|consensus 98.9 1.6E-08 3.5E-13 92.0 11.7 119 16-145 60-228 (405)
138 KOG0646|consensus 98.9 9.3E-09 2E-13 97.0 10.0 112 23-144 82-207 (476)
139 KOG4283|consensus 98.9 2E-08 4.4E-13 90.8 11.6 115 20-145 99-221 (397)
140 KOG0268|consensus 98.9 4.5E-09 9.7E-14 96.9 7.5 121 12-144 178-303 (433)
141 KOG0307|consensus 98.9 2.6E-09 5.6E-14 109.1 5.8 120 23-150 162-294 (1049)
142 KOG4283|consensus 98.8 2E-08 4.3E-13 90.8 10.4 91 6-104 173-280 (397)
143 KOG0299|consensus 98.8 2.5E-08 5.4E-13 94.0 11.5 122 14-145 135-276 (479)
144 KOG2111|consensus 98.8 1.1E-07 2.3E-12 86.6 15.0 91 52-144 159-257 (346)
145 KOG0649|consensus 98.8 9.4E-08 2E-12 84.6 13.8 124 6-142 141-273 (325)
146 KOG0308|consensus 98.8 3.6E-08 7.8E-13 96.3 12.2 115 20-144 169-286 (735)
147 KOG1273|consensus 98.8 2E-08 4.3E-13 91.4 9.6 96 15-125 19-118 (405)
148 KOG1332|consensus 98.8 1.8E-08 3.9E-13 89.0 8.9 120 15-144 4-135 (299)
149 KOG0641|consensus 98.8 5.9E-08 1.3E-12 85.2 11.8 112 22-143 231-349 (350)
150 KOG2048|consensus 98.8 3.9E-08 8.4E-13 96.2 11.6 113 22-143 154-275 (691)
151 KOG2110|consensus 98.8 2E-07 4.3E-12 86.2 15.0 132 10-144 66-205 (391)
152 KOG4378|consensus 98.8 3.9E-08 8.4E-13 93.8 10.2 124 12-144 112-240 (673)
153 KOG2048|consensus 98.8 2.5E-07 5.4E-12 90.7 15.7 122 13-144 60-185 (691)
154 KOG4328|consensus 98.8 6.2E-08 1.4E-12 91.4 10.9 167 7-188 172-396 (498)
155 KOG0321|consensus 98.8 5.9E-08 1.3E-12 94.6 10.9 125 21-152 143-310 (720)
156 KOG0322|consensus 98.7 2.3E-08 4.9E-13 89.2 7.3 53 89-142 270-322 (323)
157 KOG0294|consensus 98.7 1.9E-07 4.2E-12 84.9 12.7 121 6-140 68-194 (362)
158 KOG2106|consensus 98.7 3.6E-07 7.9E-12 87.4 14.6 120 11-146 359-480 (626)
159 COG2319 FOG: WD40 repeat [Gene 98.7 9.6E-07 2.1E-11 76.7 16.4 122 13-143 100-229 (466)
160 KOG0303|consensus 98.7 1.3E-07 2.8E-12 88.1 11.3 121 12-144 122-250 (472)
161 KOG1408|consensus 98.7 1.4E-07 2.9E-12 93.4 11.5 113 23-144 597-714 (1080)
162 KOG1274|consensus 98.7 2.3E-07 4.9E-12 93.5 12.9 109 24-142 98-217 (933)
163 KOG0307|consensus 98.7 7.5E-08 1.6E-12 98.6 9.7 129 11-146 194-330 (1049)
164 KOG4227|consensus 98.7 3.3E-07 7.2E-12 85.6 12.4 117 21-145 55-181 (609)
165 PF08662 eIF2A: Eukaryotic tra 98.6 6.9E-07 1.5E-11 76.5 13.0 115 26-144 9-134 (194)
166 PRK01742 tolB translocation pr 98.6 7.4E-07 1.6E-11 84.7 14.4 127 11-147 193-326 (429)
167 KOG2394|consensus 98.6 1.1E-07 2.5E-12 91.3 8.5 91 22-122 290-383 (636)
168 KOG1009|consensus 98.6 3.2E-07 6.9E-12 85.6 11.2 114 22-144 13-154 (434)
169 KOG2096|consensus 98.6 2.3E-07 4.9E-12 84.8 9.6 126 20-164 276-414 (420)
170 KOG1063|consensus 98.6 4.2E-07 9.1E-12 89.4 11.7 156 6-183 39-254 (764)
171 KOG0321|consensus 98.6 1.6E-07 3.5E-12 91.6 8.7 115 20-145 98-250 (720)
172 KOG1009|consensus 98.6 1.9E-07 4.2E-12 87.1 8.8 118 16-143 60-195 (434)
173 KOG0639|consensus 98.6 6E-08 1.3E-12 92.7 5.4 106 26-142 513-621 (705)
174 KOG0649|consensus 98.6 1.2E-06 2.5E-11 77.8 12.7 111 23-145 115-237 (325)
175 KOG1034|consensus 98.6 1E-07 2.2E-12 87.2 6.1 132 6-148 120-284 (385)
176 PRK11028 6-phosphogluconolacto 98.6 2.5E-06 5.4E-11 77.5 15.3 110 23-143 80-205 (330)
177 KOG1063|consensus 98.5 3.9E-07 8.5E-12 89.6 9.9 118 22-145 525-650 (764)
178 PF00400 WD40: WD domain, G-be 98.5 3.3E-07 7.1E-12 57.5 6.3 39 102-141 1-39 (39)
179 KOG2055|consensus 98.5 9.5E-07 2.1E-11 83.7 12.0 129 23-161 304-437 (514)
180 KOG3881|consensus 98.5 7.3E-07 1.6E-11 82.9 10.8 111 24-144 204-321 (412)
181 PRK11028 6-phosphogluconolacto 98.5 5E-06 1.1E-10 75.6 16.2 121 13-144 27-157 (330)
182 KOG2919|consensus 98.5 4.8E-07 1E-11 82.7 8.9 129 10-161 239-375 (406)
183 KOG1332|consensus 98.5 9.3E-07 2E-11 78.3 10.1 124 12-144 47-194 (299)
184 KOG0974|consensus 98.5 6.7E-07 1.4E-11 91.1 9.7 115 21-144 174-289 (967)
185 KOG0771|consensus 98.4 9E-07 2E-11 82.7 9.3 108 26-144 148-312 (398)
186 KOG0642|consensus 98.4 8.8E-07 1.9E-11 85.5 9.1 121 16-147 289-430 (577)
187 KOG1408|consensus 98.4 1.2E-06 2.5E-11 86.9 9.9 125 6-142 63-193 (1080)
188 KOG1007|consensus 98.4 1.7E-06 3.7E-11 78.2 10.1 132 4-144 196-362 (370)
189 KOG2919|consensus 98.4 2.1E-06 4.6E-11 78.6 10.7 136 6-152 138-289 (406)
190 KOG2106|consensus 98.4 5E-06 1.1E-10 79.8 13.6 109 23-141 201-314 (626)
191 KOG4547|consensus 98.4 5.6E-06 1.2E-10 80.2 13.8 146 9-164 88-250 (541)
192 KOG1272|consensus 98.4 3.6E-07 7.8E-12 86.7 5.0 124 10-145 199-325 (545)
193 PRK05137 tolB translocation pr 98.3 1.9E-05 4.1E-10 75.1 14.8 122 11-142 191-321 (435)
194 KOG4227|consensus 98.3 9.9E-06 2.2E-10 75.9 12.0 127 9-143 92-225 (609)
195 KOG2139|consensus 98.3 1.2E-05 2.7E-10 74.6 12.5 120 12-142 130-267 (445)
196 KOG1240|consensus 98.3 1.6E-05 3.4E-10 82.8 14.3 137 10-156 1037-1238(1431)
197 KOG0290|consensus 98.3 1E-05 2.2E-10 73.4 11.3 130 6-145 80-229 (364)
198 PRK03629 tolB translocation pr 98.3 2.6E-05 5.7E-10 74.3 14.9 114 22-144 198-318 (429)
199 PRK02889 tolB translocation pr 98.3 1.6E-05 3.5E-10 75.6 13.4 124 11-144 185-315 (427)
200 KOG2394|consensus 98.2 4.7E-06 1E-10 80.4 9.2 113 23-144 220-363 (636)
201 KOG1188|consensus 98.2 2.4E-06 5.1E-11 78.5 6.7 122 14-144 157-347 (376)
202 PRK01742 tolB translocation pr 98.2 2E-05 4.3E-10 74.9 13.0 106 22-142 291-400 (429)
203 KOG2321|consensus 98.2 6.2E-06 1.3E-10 80.1 9.2 128 5-141 159-300 (703)
204 KOG1587|consensus 98.2 2.5E-05 5.4E-10 77.0 13.6 117 14-139 236-374 (555)
205 PF02239 Cytochrom_D1: Cytochr 98.2 0.00011 2.3E-09 69.1 17.1 128 6-144 21-159 (369)
206 KOG1517|consensus 98.2 2.2E-05 4.8E-10 80.8 12.9 113 23-143 1209-1333(1387)
207 KOG1587|consensus 98.2 6.2E-06 1.3E-10 81.2 8.8 113 22-144 398-517 (555)
208 KOG2695|consensus 98.1 6.5E-06 1.4E-10 76.0 7.4 123 10-143 234-376 (425)
209 KOG0644|consensus 98.1 1.9E-06 4.1E-11 86.6 4.1 106 22-143 190-300 (1113)
210 KOG1538|consensus 98.1 4.8E-06 1E-10 82.2 6.3 121 6-141 38-160 (1081)
211 KOG1524|consensus 98.1 6.9E-06 1.5E-10 79.4 7.2 121 10-142 93-215 (737)
212 PRK04922 tolB translocation pr 98.1 6.1E-05 1.3E-09 71.6 13.8 123 11-143 193-322 (433)
213 KOG0642|consensus 98.1 1.4E-05 3E-10 77.3 9.1 118 15-142 390-560 (577)
214 KOG2139|consensus 98.1 3.6E-05 7.8E-10 71.5 11.3 104 23-138 196-306 (445)
215 KOG2445|consensus 98.1 5.1E-05 1.1E-09 69.2 12.1 121 13-144 104-257 (361)
216 KOG0644|consensus 98.1 1.1E-06 2.3E-11 88.3 1.4 126 7-144 218-347 (1113)
217 PF00400 WD40: WD domain, G-be 98.1 1.1E-05 2.4E-10 50.4 5.6 39 11-58 1-39 (39)
218 PF11768 DUF3312: Protein of u 98.1 9.9E-05 2.2E-09 72.0 14.4 164 12-188 197-366 (545)
219 KOG0771|consensus 98.0 3.5E-05 7.5E-10 72.2 10.1 114 22-144 186-355 (398)
220 KOG0650|consensus 98.0 0.00012 2.5E-09 71.8 13.6 114 16-142 395-553 (733)
221 PF02239 Cytochrom_D1: Cytochr 98.0 0.00011 2.5E-09 69.0 13.4 91 52-145 16-110 (369)
222 KOG1517|consensus 98.0 3.4E-05 7.3E-10 79.5 10.0 111 25-144 1259-1382(1387)
223 TIGR02800 propeller_TolB tol-p 98.0 0.00027 5.9E-09 65.8 15.5 112 23-143 234-354 (417)
224 KOG1538|consensus 98.0 1.4E-05 3.1E-10 79.0 6.9 96 23-132 13-112 (1081)
225 KOG0974|consensus 98.0 3.4E-05 7.4E-10 78.9 9.7 89 48-141 151-244 (967)
226 PRK03629 tolB translocation pr 98.0 0.00028 6.1E-09 67.3 15.4 111 24-143 244-363 (429)
227 KOG3914|consensus 97.9 1.6E-05 3.4E-10 74.2 5.6 88 11-110 142-233 (390)
228 KOG2315|consensus 97.9 0.00013 2.8E-09 70.8 11.9 108 22-142 270-389 (566)
229 KOG1310|consensus 97.9 3.8E-05 8.3E-10 74.5 7.9 75 70-144 47-126 (758)
230 TIGR02800 propeller_TolB tol-p 97.9 0.00038 8.1E-09 64.9 14.5 111 23-142 190-307 (417)
231 KOG1963|consensus 97.9 0.00015 3.2E-09 73.2 11.8 115 21-145 204-324 (792)
232 KOG0309|consensus 97.9 3.1E-05 6.8E-10 77.3 6.8 124 18-164 110-240 (1081)
233 PRK05137 tolB translocation pr 97.8 0.00056 1.2E-08 65.1 15.1 111 23-142 246-365 (435)
234 KOG1523|consensus 97.8 0.00013 2.8E-09 66.9 10.1 139 13-163 47-203 (361)
235 PRK00178 tolB translocation pr 97.8 0.00052 1.1E-08 64.8 14.7 121 11-141 188-315 (430)
236 KOG4714|consensus 97.8 5.3E-05 1.2E-09 67.8 6.6 106 24-141 181-316 (319)
237 PRK04922 tolB translocation pr 97.8 0.00074 1.6E-08 64.3 15.0 110 24-143 249-368 (433)
238 KOG1240|consensus 97.8 0.00021 4.6E-09 74.6 11.7 114 23-144 1196-1335(1431)
239 KOG1334|consensus 97.8 7.9E-05 1.7E-09 71.4 8.0 127 13-149 134-269 (559)
240 KOG0650|consensus 97.8 0.00013 2.8E-09 71.5 9.5 118 13-142 514-636 (733)
241 KOG1524|consensus 97.8 9.1E-05 2E-09 71.8 8.3 95 23-131 146-244 (737)
242 PRK04792 tolB translocation pr 97.8 0.00059 1.3E-08 65.5 13.9 112 23-143 218-336 (448)
243 KOG3914|consensus 97.7 0.00019 4.2E-09 67.1 9.4 153 26-196 66-228 (390)
244 KOG4547|consensus 97.7 0.00039 8.5E-09 67.6 11.5 101 41-144 69-173 (541)
245 KOG1334|consensus 97.7 4.5E-05 9.8E-10 73.0 5.0 111 22-141 336-464 (559)
246 KOG2111|consensus 97.6 0.00044 9.6E-09 63.3 10.1 77 17-101 177-257 (346)
247 PLN02919 haloacid dehalogenase 97.6 0.0018 3.8E-08 68.7 15.6 112 25-144 742-889 (1057)
248 PRK02889 tolB translocation pr 97.6 0.0027 5.8E-08 60.4 15.5 111 23-144 240-361 (427)
249 KOG0322|consensus 97.6 0.00016 3.6E-09 64.9 6.6 66 24-99 253-322 (323)
250 KOG3617|consensus 97.6 0.0003 6.6E-09 71.4 8.9 125 17-148 9-136 (1416)
251 KOG1354|consensus 97.5 0.00028 6.1E-09 65.4 7.3 111 24-141 215-357 (433)
252 smart00320 WD40 WD40 repeats. 97.5 0.00044 9.4E-09 39.8 5.6 39 102-141 2-40 (40)
253 KOG3881|consensus 97.5 0.00044 9.4E-09 64.8 8.1 109 7-126 232-344 (412)
254 KOG1064|consensus 97.5 0.00019 4.2E-09 77.4 6.4 163 11-199 2240-2406(2439)
255 KOG4714|consensus 97.5 9.8E-05 2.1E-09 66.2 3.4 89 53-143 160-254 (319)
256 PRK00178 tolB translocation pr 97.5 0.005 1.1E-07 58.1 15.3 111 24-143 244-363 (430)
257 PRK04792 tolB translocation pr 97.4 0.0042 9.1E-08 59.7 14.6 109 25-142 264-379 (448)
258 PRK01029 tolB translocation pr 97.4 0.0041 9E-08 59.4 13.8 108 24-142 282-402 (428)
259 TIGR02658 TTQ_MADH_Hv methylam 97.4 0.0051 1.1E-07 57.7 14.1 124 6-134 32-176 (352)
260 KOG1963|consensus 97.4 0.0018 4E-08 65.5 11.4 114 19-142 248-374 (792)
261 KOG4190|consensus 97.3 0.00031 6.8E-09 68.6 5.5 120 15-144 729-860 (1034)
262 PLN02919 haloacid dehalogenase 97.3 0.0092 2E-07 63.4 16.7 111 26-143 686-833 (1057)
263 KOG2695|consensus 97.3 0.0006 1.3E-08 63.3 6.7 98 11-122 289-401 (425)
264 PF15492 Nbas_N: Neuroblastoma 97.3 0.0044 9.6E-08 56.0 12.0 123 17-152 142-268 (282)
265 KOG1523|consensus 97.3 0.0031 6.6E-08 58.0 10.9 110 23-142 11-129 (361)
266 PF11768 DUF3312: Protein of u 97.3 0.0029 6.2E-08 62.0 11.4 69 22-101 259-330 (545)
267 PF10282 Lactonase: Lactonase, 97.2 0.029 6.3E-07 51.8 17.4 113 24-143 88-222 (345)
268 COG5170 CDC55 Serine/threonine 97.2 0.0014 3.1E-08 60.3 7.7 153 24-189 87-307 (460)
269 PF13360 PQQ_2: PQQ-like domai 97.2 0.012 2.7E-07 50.1 13.2 128 5-143 7-140 (238)
270 TIGR03300 assembly_YfgL outer 97.1 0.0079 1.7E-07 55.7 12.3 88 51-140 288-376 (377)
271 PF10282 Lactonase: Lactonase, 97.1 0.032 7E-07 51.5 16.0 112 23-142 192-321 (345)
272 KOG1645|consensus 97.1 0.0025 5.4E-08 60.2 8.4 88 54-144 175-267 (463)
273 COG2706 3-carboxymuconate cycl 97.1 0.02 4.3E-07 53.3 14.1 130 2-144 67-222 (346)
274 TIGR02658 TTQ_MADH_Hv methylam 97.0 0.011 2.4E-07 55.5 12.3 90 52-144 27-137 (352)
275 KOG1409|consensus 97.0 0.0043 9.3E-08 57.6 9.0 81 12-101 188-271 (404)
276 KOG1354|consensus 97.0 0.0029 6.4E-08 58.8 7.9 171 24-206 86-318 (433)
277 KOG4532|consensus 97.0 0.019 4E-07 52.1 12.7 109 24-145 160-284 (344)
278 PRK01029 tolB translocation pr 97.0 0.02 4.3E-07 54.8 13.8 114 25-143 233-359 (428)
279 PF08450 SGL: SMP-30/Gluconola 97.0 0.058 1.3E-06 46.9 15.7 101 23-132 134-244 (246)
280 KOG1912|consensus 96.9 0.01 2.3E-07 60.1 11.8 108 7-123 41-165 (1062)
281 COG5170 CDC55 Serine/threonine 96.9 0.0017 3.8E-08 59.7 5.8 143 20-175 170-342 (460)
282 KOG4497|consensus 96.9 0.0027 5.8E-08 58.8 6.7 104 27-142 13-121 (447)
283 KOG2079|consensus 96.9 0.0042 9.2E-08 64.6 8.7 86 51-138 108-200 (1206)
284 KOG4497|consensus 96.9 0.01 2.2E-07 55.1 10.3 99 25-133 51-153 (447)
285 KOG4532|consensus 96.8 0.018 3.9E-07 52.2 11.4 93 34-134 214-323 (344)
286 KOG0280|consensus 96.8 0.0064 1.4E-07 55.5 8.5 92 22-123 165-263 (339)
287 KOG0882|consensus 96.7 0.013 2.8E-07 56.2 10.3 104 51-165 121-242 (558)
288 smart00320 WD40 WD40 repeats. 96.7 0.0046 9.9E-08 35.3 4.8 39 11-58 2-40 (40)
289 PF08450 SGL: SMP-30/Gluconola 96.7 0.12 2.7E-06 44.8 15.9 108 25-144 42-165 (246)
290 PRK04043 tolB translocation pr 96.6 0.11 2.4E-06 49.7 16.0 114 24-146 189-310 (419)
291 PF14783 BBS2_Mid: Ciliary BBS 96.5 0.24 5.2E-06 39.1 14.7 100 24-139 1-110 (111)
292 KOG2315|consensus 96.5 0.025 5.5E-07 55.2 11.0 89 51-145 250-346 (566)
293 PF08553 VID27: VID27 cytoplas 96.5 0.041 8.9E-07 56.6 12.9 126 5-135 508-640 (794)
294 KOG0309|consensus 96.4 0.0054 1.2E-07 61.9 5.8 133 53-189 181-337 (1081)
295 TIGR03300 assembly_YfgL outer 96.4 0.08 1.7E-06 48.9 13.3 122 5-143 79-208 (377)
296 PF13360 PQQ_2: PQQ-like domai 96.4 0.048 1E-06 46.4 10.7 100 51-156 2-105 (238)
297 KOG1645|consensus 96.3 0.0081 1.8E-07 56.8 6.2 102 22-135 193-309 (463)
298 PRK11138 outer membrane biogen 96.3 0.15 3.3E-06 47.6 14.9 94 48-143 300-394 (394)
299 PF14783 BBS2_Mid: Ciliary BBS 96.2 0.059 1.3E-06 42.6 9.5 61 76-141 2-69 (111)
300 COG2706 3-carboxymuconate cycl 96.2 0.2 4.4E-06 46.7 14.2 114 24-146 146-277 (346)
301 KOG2066|consensus 96.1 0.065 1.4E-06 54.5 11.7 86 52-144 93-188 (846)
302 COG4946 Uncharacterized protei 96.1 0.089 1.9E-06 51.1 12.0 103 17-131 397-506 (668)
303 PF03178 CPSF_A: CPSF A subuni 96.1 0.49 1.1E-05 43.0 16.7 111 22-144 88-203 (321)
304 PRK04043 tolB translocation pr 96.1 0.26 5.7E-06 47.1 15.2 101 23-134 233-339 (419)
305 KOG1275|consensus 96.0 0.029 6.3E-07 57.8 8.7 129 7-141 203-340 (1118)
306 KOG1912|consensus 95.9 0.034 7.5E-07 56.5 8.3 106 24-141 17-141 (1062)
307 KOG1008|consensus 95.9 0.004 8.7E-08 61.8 1.8 145 52-232 80-238 (783)
308 KOG1409|consensus 95.8 0.12 2.6E-06 48.3 10.8 89 72-163 196-289 (404)
309 KOG0280|consensus 95.7 0.14 3.1E-06 46.9 11.0 76 68-146 162-244 (339)
310 KOG1832|consensus 95.7 0.0044 9.6E-08 63.6 1.2 136 6-158 1128-1270(1516)
311 KOG2395|consensus 95.6 0.14 3.1E-06 50.3 11.0 126 5-135 360-493 (644)
312 COG4946 Uncharacterized protei 95.5 0.69 1.5E-05 45.1 15.4 94 46-143 375-477 (668)
313 PF15492 Nbas_N: Neuroblastoma 95.5 0.26 5.5E-06 44.8 11.9 102 24-133 45-167 (282)
314 KOG1064|consensus 95.5 0.019 4.1E-07 62.8 5.1 117 10-147 2281-2402(2439)
315 COG5354 Uncharacterized protei 95.0 0.32 7E-06 47.4 11.4 109 22-144 274-396 (561)
316 KOG2314|consensus 95.0 0.15 3.2E-06 50.3 9.2 110 26-148 214-339 (698)
317 PF12894 Apc4_WD40: Anaphase-p 94.9 0.075 1.6E-06 35.5 5.0 30 113-142 11-40 (47)
318 KOG2041|consensus 94.9 0.23 4.9E-06 50.5 10.4 148 23-179 15-192 (1189)
319 PF03178 CPSF_A: CPSF A subuni 94.7 0.43 9.4E-06 43.3 11.3 154 6-161 7-184 (321)
320 PF00930 DPPIV_N: Dipeptidyl p 94.6 0.13 2.9E-06 47.5 7.7 116 31-149 1-137 (353)
321 PRK02888 nitrous-oxide reducta 94.3 1.2 2.5E-05 45.0 13.9 89 52-144 296-405 (635)
322 PF05096 Glu_cyclase_2: Glutam 94.2 3.6 7.7E-05 37.3 15.6 120 12-141 34-155 (264)
323 PF04053 Coatomer_WDAD: Coatom 94.2 0.39 8.5E-06 46.5 10.1 138 86-236 120-279 (443)
324 KOG3621|consensus 94.0 0.52 1.1E-05 47.6 10.6 98 47-144 50-155 (726)
325 PF07433 DUF1513: Protein of u 94.0 2.4 5.2E-05 39.1 14.3 127 4-135 31-184 (305)
326 KOG2395|consensus 93.9 0.48 1E-05 46.7 10.0 93 53-148 357-473 (644)
327 KOG2066|consensus 93.8 0.26 5.7E-06 50.3 8.1 92 48-158 55-154 (846)
328 PF08553 VID27: VID27 cytoplas 93.3 1 2.3E-05 46.6 11.7 87 53-141 505-604 (794)
329 PF04762 IKI3: IKI3 family; I 93.0 2 4.4E-05 45.3 13.6 114 22-144 304-457 (928)
330 PF02897 Peptidase_S9_N: Proly 92.9 1.4 3.1E-05 41.2 11.4 125 27-156 128-274 (414)
331 PF06977 SdiA-regulated: SdiA- 92.7 4.9 0.00011 35.9 14.0 108 22-140 117-247 (248)
332 KOG2314|consensus 92.7 0.98 2.1E-05 44.8 10.0 106 23-129 250-362 (698)
333 PRK02888 nitrous-oxide reducta 92.6 1.2 2.7E-05 44.8 10.9 81 12-101 312-405 (635)
334 KOG1832|consensus 92.0 0.16 3.5E-06 52.7 3.8 122 14-157 1094-1221(1516)
335 KOG4640|consensus 91.9 0.84 1.8E-05 45.7 8.6 87 23-122 21-114 (665)
336 PF06977 SdiA-regulated: SdiA- 91.9 6.9 0.00015 35.0 13.9 116 23-146 22-150 (248)
337 PF07433 DUF1513: Protein of u 91.9 8.1 0.00018 35.7 14.5 123 6-136 143-278 (305)
338 KOG1008|consensus 91.8 0.06 1.3E-06 53.8 0.6 108 23-145 155-277 (783)
339 PRK11138 outer membrane biogen 91.7 2.2 4.8E-05 39.8 11.1 88 52-142 79-177 (394)
340 KOG4190|consensus 91.6 0.62 1.3E-05 46.2 7.2 121 12-144 776-907 (1034)
341 COG3386 Gluconolactonase [Carb 91.5 5.7 0.00012 36.6 13.2 110 23-143 66-193 (307)
342 KOG2114|consensus 91.2 4.2 9.1E-05 42.2 12.8 97 48-147 143-247 (933)
343 KOG4640|consensus 91.1 1.2 2.6E-05 44.6 8.7 69 74-145 21-94 (665)
344 COG3386 Gluconolactonase [Carb 90.9 6.2 0.00014 36.3 12.9 104 23-137 163-279 (307)
345 PF08596 Lgl_C: Lethal giant l 90.9 6.4 0.00014 37.6 13.4 52 22-82 86-144 (395)
346 PF10313 DUF2415: Uncharacteri 90.8 0.7 1.5E-05 30.3 4.7 32 24-62 2-35 (43)
347 COG5354 Uncharacterized protei 90.5 1.2 2.5E-05 43.7 7.8 105 23-141 33-158 (561)
348 PF12234 Rav1p_C: RAVE protein 90.4 5.7 0.00012 40.2 13.0 108 24-141 31-154 (631)
349 PF04762 IKI3: IKI3 family; I 90.1 8.6 0.00019 40.7 14.6 110 23-140 22-147 (928)
350 PF12234 Rav1p_C: RAVE protein 89.9 2.4 5.2E-05 42.9 9.9 68 86-153 45-117 (631)
351 PF06433 Me-amine-dh_H: Methyl 89.3 14 0.00029 34.8 13.7 135 6-148 22-170 (342)
352 COG3391 Uncharacterized conser 89.3 11 0.00025 35.3 13.6 105 26-141 77-188 (381)
353 KOG2079|consensus 89.3 0.94 2E-05 47.9 6.6 68 22-99 130-202 (1206)
354 KOG4649|consensus 89.1 8.5 0.00018 35.3 11.7 106 28-144 16-124 (354)
355 PF10313 DUF2415: Uncharacteri 88.8 1.2 2.7E-05 29.2 4.7 30 115-144 2-34 (43)
356 PF00780 CNH: CNH domain; Int 88.7 5 0.00011 35.1 10.2 85 54-143 18-122 (275)
357 KOG2114|consensus 88.2 10 0.00022 39.5 13.0 79 22-109 171-252 (933)
358 KOG1275|consensus 88.0 2.5 5.5E-05 44.2 8.6 93 5-109 161-263 (1118)
359 PF15390 DUF4613: Domain of un 87.8 9.6 0.00021 38.3 12.1 107 24-141 58-184 (671)
360 COG3391 Uncharacterized conser 87.8 24 0.00053 33.1 15.1 127 6-143 101-239 (381)
361 COG5167 VID27 Protein involved 87.7 3.3 7.3E-05 41.0 8.8 105 33-149 478-606 (776)
362 PF04053 Coatomer_WDAD: Coatom 86.5 14 0.00031 35.7 12.6 118 6-143 131-262 (443)
363 PF06433 Me-amine-dh_H: Methyl 86.4 3.1 6.7E-05 39.0 7.6 56 53-110 270-330 (342)
364 KOG2041|consensus 85.7 1.1 2.4E-05 45.8 4.5 109 13-141 63-184 (1189)
365 PRK13616 lipoprotein LpqB; Pro 85.4 13 0.00029 37.3 12.1 118 25-148 399-530 (591)
366 PF05694 SBP56: 56kDa selenium 85.0 10 0.00022 36.9 10.5 95 50-144 220-343 (461)
367 PF08596 Lgl_C: Lethal giant l 84.2 28 0.00061 33.2 13.2 105 53-159 58-188 (395)
368 KOG1920|consensus 84.0 7.5 0.00016 41.8 9.8 86 53-142 223-321 (1265)
369 PRK13684 Ycf48-like protein; P 83.9 31 0.00066 31.9 13.1 103 24-137 174-282 (334)
370 PF07569 Hira: TUP1-like enhan 83.9 7.2 0.00016 34.0 8.5 68 74-142 13-94 (219)
371 PF04841 Vps16_N: Vps16, N-ter 83.8 12 0.00027 35.6 10.7 75 27-104 33-112 (410)
372 cd00216 PQQ_DH Dehydrogenases 83.4 8.6 0.00019 37.4 9.6 123 47-178 306-454 (488)
373 PF10647 Gmad1: Lipoprotein Lp 82.7 29 0.00063 30.7 12.0 111 24-143 25-144 (253)
374 cd00216 PQQ_DH Dehydrogenases 82.6 25 0.00053 34.2 12.4 81 51-134 365-457 (488)
375 KOG2444|consensus 82.6 4.7 0.0001 35.8 6.7 110 34-145 62-179 (238)
376 TIGR03075 PQQ_enz_alc_DH PQQ-d 80.7 24 0.00052 34.8 11.7 68 34-109 69-147 (527)
377 PF10214 Rrn6: RNA polymerase 79.9 41 0.00089 34.8 13.5 127 23-157 146-294 (765)
378 PF12768 Rax2: Cortical protei 78.8 52 0.0011 30.0 12.4 99 22-123 36-146 (281)
379 COG0823 TolB Periplasmic compo 78.5 19 0.00042 34.7 10.0 148 11-175 182-338 (425)
380 KOG3630|consensus 78.1 5.7 0.00012 42.6 6.6 110 23-141 101-226 (1405)
381 KOG4499|consensus 77.5 12 0.00026 33.8 7.6 37 86-123 227-263 (310)
382 PF07569 Hira: TUP1-like enhan 77.2 13 0.00028 32.4 7.8 26 33-66 21-46 (219)
383 PF12894 Apc4_WD40: Anaphase-p 77.0 6.1 0.00013 26.2 4.4 33 22-63 11-43 (47)
384 PF14761 HPS3_N: Hermansky-Pud 77.0 36 0.00078 29.9 10.3 85 53-141 39-161 (215)
385 TIGR02276 beta_rpt_yvtn 40-res 76.8 11 0.00023 23.1 5.3 30 90-121 12-41 (42)
386 COG3490 Uncharacterized protei 74.9 45 0.00098 31.0 10.7 122 6-131 96-243 (366)
387 TIGR02276 beta_rpt_yvtn 40-res 74.2 16 0.00034 22.3 5.6 30 32-68 1-30 (42)
388 PF08954 DUF1900: Domain of un 74.0 8.8 0.00019 31.2 5.5 69 28-103 16-87 (136)
389 PRK10115 protease 2; Provision 73.6 1E+02 0.0023 31.5 14.2 113 25-144 129-256 (686)
390 PF05096 Glu_cyclase_2: Glutam 72.5 76 0.0016 28.8 14.6 114 5-133 114-250 (264)
391 PF00930 DPPIV_N: Dipeptidyl p 72.0 69 0.0015 29.4 11.7 98 27-134 239-348 (353)
392 PF08728 CRT10: CRT10; InterP 71.8 52 0.0011 34.0 11.4 73 74-148 164-252 (717)
393 PLN00033 photosystem II stabil 70.2 99 0.0022 29.6 12.5 64 74-139 281-352 (398)
394 TIGR02604 Piru_Ver_Nterm putat 69.9 94 0.002 28.8 12.9 60 74-135 124-205 (367)
395 TIGR03074 PQQ_membr_DH membran 69.5 75 0.0016 33.1 12.2 68 34-109 194-287 (764)
396 PLN00033 photosystem II stabil 69.3 1.1E+02 0.0023 29.3 14.8 65 74-140 328-396 (398)
397 PF00780 CNH: CNH domain; Int 69.3 21 0.00046 31.1 7.3 60 86-149 11-70 (275)
398 PF11715 Nup160: Nucleoporin N 68.4 39 0.00085 33.0 9.7 34 75-108 216-256 (547)
399 KOG3621|consensus 68.3 7.3 0.00016 39.6 4.5 71 24-101 77-155 (726)
400 COG0823 TolB Periplasmic compo 67.9 28 0.0006 33.6 8.3 96 29-133 288-389 (425)
401 TIGR03075 PQQ_enz_alc_DH PQQ-d 67.8 37 0.0008 33.5 9.3 58 51-110 440-500 (527)
402 KOG3617|consensus 66.9 23 0.00049 37.4 7.6 63 12-82 91-156 (1416)
403 PF14655 RAB3GAP2_N: Rab3 GTPa 66.0 75 0.0016 30.7 10.7 79 23-110 308-408 (415)
404 PF14781 BBS2_N: Ciliary BBSom 65.3 75 0.0016 26.0 11.3 85 52-141 20-123 (136)
405 TIGR03074 PQQ_membr_DH membran 64.7 1E+02 0.0022 32.1 12.1 63 46-110 264-354 (764)
406 KOG0882|consensus 64.6 24 0.00053 34.5 7.0 126 23-164 54-190 (558)
407 PF11715 Nup160: Nucleoporin N 64.5 14 0.0003 36.2 5.6 28 33-68 229-256 (547)
408 PF02897 Peptidase_S9_N: Proly 64.4 24 0.00053 32.9 7.1 56 75-132 125-188 (414)
409 COG3823 Glutamine cyclotransfe 63.9 61 0.0013 28.9 8.8 115 3-132 113-247 (262)
410 KOG2377|consensus 62.4 41 0.0009 33.2 8.1 105 20-133 64-173 (657)
411 PRK13616 lipoprotein LpqB; Pro 61.4 83 0.0018 31.7 10.5 111 24-140 351-473 (591)
412 smart00564 PQQ beta-propeller 60.6 18 0.00039 21.0 3.6 27 34-68 6-32 (33)
413 PF10168 Nup88: Nuclear pore c 60.3 1E+02 0.0022 31.9 11.1 69 24-101 86-180 (717)
414 KOG1897|consensus 59.9 1.7E+02 0.0036 31.5 12.4 115 24-139 776-894 (1096)
415 PF08728 CRT10: CRT10; InterP 59.8 35 0.00075 35.3 7.5 71 23-99 164-245 (717)
416 PF10214 Rrn6: RNA polymerase 59.7 1.6E+02 0.0035 30.5 12.6 70 72-142 78-175 (765)
417 PF01436 NHL: NHL repeat; Int 59.3 28 0.00061 20.1 4.2 25 116-140 4-28 (28)
418 PF03088 Str_synth: Strictosid 59.0 30 0.00065 26.1 5.4 51 90-142 35-86 (89)
419 KOG2377|consensus 57.9 1.1E+02 0.0024 30.4 10.1 47 54-100 45-96 (657)
420 PF13449 Phytase-like: Esteras 57.5 1.5E+02 0.0033 27.0 13.3 111 22-135 19-168 (326)
421 PF03088 Str_synth: Strictosid 56.6 83 0.0018 23.6 7.5 46 50-97 35-85 (89)
422 TIGR03118 PEPCTERM_chp_1 conse 55.9 84 0.0018 29.4 8.6 71 77-148 26-122 (336)
423 PF02333 Phytase: Phytase; In 55.3 2E+02 0.0043 27.6 15.5 193 10-212 86-340 (381)
424 KOG4305|consensus 54.4 96 0.0021 33.4 9.8 38 72-110 952-989 (1029)
425 KOG1920|consensus 54.1 72 0.0016 34.8 8.9 61 74-138 69-134 (1265)
426 KOG4460|consensus 54.1 1.2E+02 0.0027 30.5 9.9 71 24-103 105-201 (741)
427 PF14870 PSII_BNR: Photosynthe 52.8 1.9E+02 0.0041 26.6 13.6 100 23-134 145-253 (302)
428 TIGR02604 Piru_Ver_Nterm putat 50.4 1.9E+02 0.004 26.8 10.4 109 23-133 14-143 (367)
429 PF10395 Utp8: Utp8 family; I 49.6 3.1E+02 0.0067 28.3 12.2 113 23-145 130-261 (670)
430 COG5167 VID27 Protein involved 48.9 2.2E+02 0.0048 28.7 10.7 130 5-143 494-632 (776)
431 KOG1896|consensus 48.7 2.5E+02 0.0054 31.0 11.7 106 22-142 1097-1212(1366)
432 PF11635 Med16: Mediator compl 48.3 68 0.0015 33.2 7.7 64 86-149 275-358 (753)
433 COG3490 Uncharacterized protei 48.1 2.4E+02 0.0052 26.4 11.0 77 54-135 93-183 (366)
434 PF07995 GSDH: Glucose / Sorbo 47.6 2.3E+02 0.0049 26.0 13.0 122 25-155 4-166 (331)
435 PF01011 PQQ: PQQ enzyme repea 44.1 44 0.00094 20.5 3.6 22 49-70 7-28 (38)
436 TIGR03032 conserved hypothetic 43.6 1.3E+02 0.0028 28.3 7.9 71 56-135 189-262 (335)
437 PF07676 PD40: WD40-like Beta 43.1 74 0.0016 19.1 5.2 28 113-140 8-38 (39)
438 PRK13684 Ycf48-like protein; P 43.0 2.7E+02 0.0058 25.6 14.2 66 74-141 260-329 (334)
439 PF10168 Nup88: Nuclear pore c 42.7 4.1E+02 0.0089 27.6 12.3 72 73-144 84-180 (717)
440 PF11333 DUF3135: Protein of u 41.5 31 0.00067 25.7 3.0 22 217-238 15-36 (83)
441 KOG4441|consensus 41.3 1.7E+02 0.0038 29.2 9.1 82 52-136 301-392 (571)
442 PF05935 Arylsulfotrans: Aryls 40.5 3.3E+02 0.0071 26.5 10.7 77 52-133 128-209 (477)
443 KOG1898|consensus 40.5 4.2E+02 0.0092 28.9 11.8 115 6-121 858-984 (1205)
444 KOG3611|consensus 39.6 2.6E+02 0.0056 29.2 10.2 73 63-138 399-488 (737)
445 PF10395 Utp8: Utp8 family; I 38.2 4.5E+02 0.0098 27.1 11.4 60 113-183 129-189 (670)
446 PF05787 DUF839: Bacterial pro 37.5 3E+02 0.0065 27.3 10.0 21 113-133 501-521 (524)
447 COG1520 FOG: WD40-like repeat 37.5 3.3E+02 0.0071 25.0 11.0 64 47-110 73-139 (370)
448 KOG2444|consensus 36.6 60 0.0013 29.0 4.5 46 51-102 123-168 (238)
449 PF01731 Arylesterase: Arylest 35.4 1.9E+02 0.0041 21.6 6.8 47 92-142 36-83 (86)
450 TIGR03118 PEPCTERM_chp_1 conse 33.4 4.1E+02 0.0089 24.9 12.2 110 24-141 24-168 (336)
451 PF13570 PQQ_3: PQQ-like domai 32.0 1.2E+02 0.0026 18.4 4.3 19 124-142 20-38 (40)
452 PF15084 DUF4550: Domain of un 31.9 70 0.0015 24.8 3.6 65 22-101 17-84 (99)
453 COG4247 Phy 3-phytase (myo-ino 31.8 1.1E+02 0.0024 28.1 5.4 86 86-181 70-177 (364)
454 PF04841 Vps16_N: Vps16, N-ter 30.3 4.8E+02 0.01 24.8 15.4 68 23-98 217-285 (410)
455 KOG4460|consensus 30.1 5.6E+02 0.012 26.1 10.2 31 115-145 167-200 (741)
456 KOG4649|consensus 29.4 4.6E+02 0.01 24.3 10.0 94 41-137 62-159 (354)
457 PRK09744 DNA-binding transcrip 28.1 14 0.0003 27.1 -0.8 20 214-233 49-68 (75)
458 smart00036 CNH Domain found in 28.1 4.5E+02 0.0098 23.7 11.3 37 74-110 244-280 (302)
459 TIGR03606 non_repeat_PQQ dehyd 28.0 5.8E+02 0.013 25.0 14.6 61 14-84 22-89 (454)
460 KOG2280|consensus 27.4 4E+02 0.0086 28.0 9.0 95 27-125 37-139 (829)
461 KOG4017|consensus 27.1 44 0.00095 30.1 2.0 52 170-223 133-192 (274)
462 COG3211 PhoX Predicted phospha 27.1 1.3E+02 0.0028 30.4 5.4 58 78-135 504-575 (616)
463 PF14761 HPS3_N: Hermansky-Pud 26.8 1.9E+02 0.0041 25.5 5.9 54 86-141 32-93 (215)
464 PF01731 Arylesterase: Arylest 26.2 2.1E+02 0.0046 21.3 5.3 32 23-61 54-85 (86)
465 PF14870 PSII_BNR: Photosynthe 25.2 5.4E+02 0.012 23.6 13.1 66 74-141 145-213 (302)
466 KOG4499|consensus 24.9 73 0.0016 28.9 3.0 30 3-33 235-264 (310)
467 PF08801 Nucleoporin_N: Nup133 24.6 2.1E+02 0.0046 26.9 6.3 49 115-163 191-240 (422)
468 KOG4387|consensus 24.5 52 0.0011 28.2 1.9 17 137-153 17-33 (191)
469 PHA02713 hypothetical protein; 23.7 3.7E+02 0.0081 26.6 8.1 89 52-141 432-531 (557)
470 PF10647 Gmad1: Lipoprotein Lp 23.6 5E+02 0.011 22.7 12.2 115 24-148 67-200 (253)
471 PF14583 Pectate_lyase22: Olig 23.1 6.8E+02 0.015 24.1 11.5 98 6-110 15-120 (386)
472 COG3204 Uncharacterized protei 22.9 6.3E+02 0.014 23.6 12.3 114 22-143 85-210 (316)
473 PF13110 DUF3966: Protein of u 22.4 43 0.00094 22.0 0.8 18 219-236 26-43 (50)
474 PF11848 DUF3368: Domain of un 22.3 55 0.0012 21.5 1.3 17 201-217 31-47 (48)
475 PF08608 Wyosine_form: Wyosine 22.2 28 0.00061 24.5 -0.1 10 196-205 9-19 (62)
476 KOG2103|consensus 22.2 4.7E+02 0.01 27.7 8.4 78 23-110 36-113 (910)
477 PF14781 BBS2_N: Ciliary BBSom 21.8 4.5E+02 0.0097 21.5 9.5 55 53-109 74-134 (136)
478 KOG1916|consensus 21.7 1.7E+02 0.0036 31.5 5.2 65 52-120 257-340 (1283)
479 KOG2063|consensus 21.4 5.9E+02 0.013 27.2 9.2 49 86-137 254-302 (877)
480 KOG4752|consensus 21.2 1.1E+02 0.0024 17.4 2.2 21 223-243 3-23 (26)
481 PF07995 GSDH: Glucose / Sorbo 21.0 6.1E+02 0.013 23.1 8.5 25 114-138 306-330 (331)
482 KOG1027|consensus 20.9 3.9E+02 0.0085 28.4 7.6 98 32-140 105-207 (903)
483 PHA03098 kelch-like protein; P 20.8 7.6E+02 0.017 23.8 9.9 89 52-142 406-510 (534)
484 PF11014 DUF2852: Protein of u 20.5 1.1E+02 0.0023 24.4 2.8 19 220-239 70-88 (115)
No 1
>KOG2321|consensus
Probab=100.00 E-value=5.3e-76 Score=555.20 Aligned_cols=211 Identities=52% Similarity=0.957 Sum_probs=201.0
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eeeeCCCeEEEEECC
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLSMDSSVVKIWSKD 100 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~Ssdd~~IKIWD~~ 100 (248)
|+++.|.+ +|+-+++|... |.|.|||||+++|+.+++|+|+.||+.+.|.+.. |+|+|.+++||||..
T Consensus 231 vTal~F~d-~gL~~aVGts~-------G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiWd~~ 302 (703)
T KOG2321|consen 231 VTALKFRD-DGLHVAVGTST-------GSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSMDKRILKIWDEC 302 (703)
T ss_pred ceEEEecC-CceeEEeeccC-------CcEEEEEcccCCceeecccCCccceeeecccccCCCceEEecchHHhhhcccc
Confidence 66666655 58877776664 6999999999999999999999999999998763 999999999999999
Q ss_pred CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhccccccccCCceeecHh
Q psy2083 101 NGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQ 180 (248)
Q Consensus 101 tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~~~~yd~y~fvt~~ 180 (248)
+|++.+++++ ..+||++|+.|++||+|+|++++.|+.||||+|||||+||||||||||||||.+.++|||||||||++
T Consensus 303 ~Gk~~asiEp--t~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~LGPaPrWCSfLdnlTEElEE~~~~TVYDnYkFvTkk 380 (703)
T KOG2321|consen 303 TGKPMASIEP--TSDLNDFCFVPGSGMFFTANESSKMHTYYIPSLGPAPRWCSFLDNLTEELEENPETTVYDNYKFVTKK 380 (703)
T ss_pred cCCceeeccc--cCCcCceeeecCCceEEEecCCCcceeEEccccCCCchhhhHHHhHHHHHhcCCccccccceeeeeHH
Confidence 9999999999 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCccccCCCcccccceeeeechhhHHHHhhhcCChhhHHHHHHHHHHHHHHHhhcCcccc
Q psy2083 181 ELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLN 245 (248)
Q Consensus 181 ~l~~l~~~~ligt~~l~~ymhgyf~~~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 245 (248)
||++|||+|||||++|||||||||||.+||+||++++|||||++||+++||++||++|++||+.+
T Consensus 381 dL~~LgLthLiGt~vLrAyMHGyFid~~LY~Ka~~v~~PFAye~yr~~kir~~iE~eR~sri~~k 445 (703)
T KOG2321|consen 381 DLEKLGLTHLIGTNVLRAYMHGYFIDARLYNKAKLVVNPFAYEDYRERKIREKIEEERESRIQKK 445 (703)
T ss_pred HHHhcCCcceeCchHHHHHhhhhhhhHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999987
No 2
>KOG0282|consensus
Probab=99.82 E-value=1.4e-20 Score=176.35 Aligned_cols=194 Identities=16% Similarity=0.268 Sum_probs=159.3
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-CceeEEecCCCCCCeeEEEEcCCc---eee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-DKPLRVKDHMYGLPIRDIKFHDNY---VLS 88 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~pl~~~~h~~~~pI~sI~F~~d~---l~S 88 (248)
.+.++.+| ...|+.+.|||-.+.|+.+++-+ |.|+||+++. ++.+.++. +|..||++++|++++ +.+
T Consensus 206 ~~~~~~gH-~kgvsai~~fp~~~hLlLS~gmD-------~~vklW~vy~~~~~lrtf~-gH~k~Vrd~~~s~~g~~fLS~ 276 (503)
T KOG0282|consen 206 LSHNLSGH-TKGVSAIQWFPKKGHLLLSGGMD-------GLVKLWNVYDDRRCLRTFK-GHRKPVRDASFNNCGTSFLSA 276 (503)
T ss_pred heeeccCC-ccccchhhhccceeeEEEecCCC-------ceEEEEEEecCcceehhhh-cchhhhhhhhccccCCeeeee
Confidence 45555565 89999999999888877665554 4999999999 56677663 455999999999998 555
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhcc--
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEEN-- 165 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~-- 165 (248)
|-|+.||+||.+||+++..++. ...++++.|.||+ +++++|+.|++|..|||.. -.|++|+.++
T Consensus 277 sfD~~lKlwDtETG~~~~~f~~--~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs-----------~kvvqeYd~hLg 343 (503)
T KOG0282|consen 277 SFDRFLKLWDTETGQVLSRFHL--DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRS-----------GKVVQEYDRHLG 343 (503)
T ss_pred ecceeeeeeccccceEEEEEec--CCCceeeecCCCCCcEEEEecCCCcEEEEeccc-----------hHHHHHHHhhhh
Confidence 6899999999999999999998 6889999999999 9999999999999999975 2399999998
Q ss_pred ---ccccccCCceeecHhHHhhcCCcc-ccCC---Ccccccce-----------eeeechhhHHHHhhhcCChhhHHHHH
Q psy2083 166 ---IIENVYDDYKFVTRQELEDLGLGH-LIGT---SLLRAYMH-----------GFFMDIRLYRKAKSVSAPFEFEEFKK 227 (248)
Q Consensus 166 ---~~~~~yd~y~fvt~~~l~~l~~~~-ligt---~~l~~ymh-----------gyf~~~~ly~~~~~~~~~~~~~~~~~ 227 (248)
..+++-++-+|||..|...+.+|+ -|++ .-+.+-|| +||+.+.|.|.+..++.-..|...||
T Consensus 344 ~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkk 423 (503)
T KOG0282|consen 344 AILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKK 423 (503)
T ss_pred heeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHh
Confidence 467888999999999999999987 6775 34566677 89999999999887764434444444
Q ss_pred H
Q psy2083 228 K 228 (248)
Q Consensus 228 ~ 228 (248)
|
T Consensus 424 K 424 (503)
T KOG0282|consen 424 K 424 (503)
T ss_pred h
Confidence 4
No 3
>KOG0315|consensus
Probab=99.76 E-value=7.7e-18 Score=147.88 Aligned_cols=137 Identities=16% Similarity=0.210 Sum_probs=114.0
Q ss_pred hhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc--eeEEecCCCCCCeeEEEEcCCc
Q psy2083 8 QDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK--PLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 8 ~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~--pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+.+|+|..+|.+. .+.||.+...|+.+.|+++|.. +|||||+++++ |+.+++ +|...|.+|.|+.++
T Consensus 27 a~tG~C~rTiqh~-dsqVNrLeiTpdk~~LAaa~~q---------hvRlyD~~S~np~Pv~t~e-~h~kNVtaVgF~~dg 95 (311)
T KOG0315|consen 27 ALTGICSRTIQHP-DSQVNRLEITPDKKDLAAAGNQ---------HVRLYDLNSNNPNPVATFE-GHTKNVTAVGFQCDG 95 (311)
T ss_pred hhcCeEEEEEecC-ccceeeEEEcCCcchhhhccCC---------eeEEEEccCCCCCceeEEe-ccCCceEEEEEeecC
Confidence 5689999999987 5899999999999999888877 69999999985 577764 344789999999998
Q ss_pred ---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhh
Q psy2083 86 ---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEEL 162 (248)
Q Consensus 86 ---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~ 162 (248)
..+++|+++||||.++-.+-..++. .++||+++.+|+.+.|+++.+++.|++||+-. -++...++.|-
T Consensus 96 rWMyTgseDgt~kIWdlR~~~~qR~~~~--~spVn~vvlhpnQteLis~dqsg~irvWDl~~-------~~c~~~liPe~ 166 (311)
T KOG0315|consen 96 RWMYTGSEDGTVKIWDLRSLSCQRNYQH--NSPVNTVVLHPNQTELISGDQSGNIRVWDLGE-------NSCTHELIPED 166 (311)
T ss_pred eEEEecCCCceEEEEeccCcccchhccC--CCCcceEEecCCcceEEeecCCCcEEEEEccC-------CccccccCCCC
Confidence 5667999999999998666556665 89999999999999999999999999999754 23455555544
Q ss_pred hc
Q psy2083 163 EE 164 (248)
Q Consensus 163 e~ 164 (248)
++
T Consensus 167 ~~ 168 (311)
T KOG0315|consen 167 DT 168 (311)
T ss_pred Cc
Confidence 43
No 4
>KOG0286|consensus
Probab=99.74 E-value=2.4e-17 Score=147.33 Aligned_cols=125 Identities=18% Similarity=0.319 Sum_probs=110.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCC-CCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYG-LPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~-~pI~sI~F~~d 84 (248)
-|.++|.+.++|++| ++.||+++||| +|.-|++|+|+ +++||||||+.+.+.++.|... .||++|+|+..
T Consensus 214 WD~R~~~c~qtF~gh-esDINsv~ffP-~G~afatGSDD-------~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~S 284 (343)
T KOG0286|consen 214 WDVRSGQCVQTFEGH-ESDINSVRFFP-SGDAFATGSDD-------ATCRLYDLRADQELAVYSHDSIICGITSVAFSKS 284 (343)
T ss_pred eeccCcceeEeeccc-ccccceEEEcc-CCCeeeecCCC-------ceeEEEeecCCcEEeeeccCcccCCceeEEEccc
Confidence 578899999999998 79999999999 55666666665 5999999999999988865432 58999999999
Q ss_pred c--eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 85 Y--VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 85 ~--l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
+ +.+ .+|.++.+||.-.|+.+..+.+ |...|.++.++|||-.+.+|+-|.+|++|
T Consensus 285 GRlLfagy~d~~c~vWDtlk~e~vg~L~G-HeNRvScl~~s~DG~av~TgSWDs~lriW 342 (343)
T KOG0286|consen 285 GRLLFAGYDDFTCNVWDTLKGERVGVLAG-HENRVSCLGVSPDGMAVATGSWDSTLRIW 342 (343)
T ss_pred ccEEEeeecCCceeEeeccccceEEEeec-cCCeeEEEEECCCCcEEEecchhHheeec
Confidence 8 444 6899999999999999999998 79999999999999999999999999999
No 5
>KOG0263|consensus
Probab=99.72 E-value=6.4e-17 Score=158.46 Aligned_cols=184 Identities=13% Similarity=0.146 Sum_probs=135.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCC-------------
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHM------------- 71 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~------------- 71 (248)
+|..++-...++=+| +++|..+.|+|+...|+++++|. +||||.+++-..+..+ +|.
T Consensus 436 ~D~~~~~~~~~L~GH-~GPVyg~sFsPd~rfLlScSED~--------svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~Gy 506 (707)
T KOG0263|consen 436 LDDDSSGTSRTLYGH-SGPVYGCSFSPDRRFLLSCSEDS--------SVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGY 506 (707)
T ss_pred ccccCCceeEEeecC-CCceeeeeecccccceeeccCCc--------ceeeeecccceeEEEecCCCcceeeEEecCCce
Confidence 344444444444454 89999999999999999998886 9999999998665553 442
Q ss_pred ---------------------------CCCCeeEEEEcCCc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEE
Q psy2083 72 ---------------------------YGLPIRDIKFHDNY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCH 121 (248)
Q Consensus 72 ---------------------------~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~ 121 (248)
|-..|.+|.|||+. ++ +|.|++||+||..+|..+.-|.+ |..+|.+++|
T Consensus 507 YFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~G-H~~~V~al~~ 585 (707)
T KOG0263|consen 507 YFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTG-HKGPVTALAF 585 (707)
T ss_pred EEEecCCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecC-CCCceEEEEE
Confidence 11234445555555 44 46899999999999999999998 7999999999
Q ss_pred eCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhcc----ccccccCCceeecHhHHhhcCCccccCCCccc
Q psy2083 122 IPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEEN----IIENVYDDYKFVTRQELEDLGLGHLIGTSLLR 197 (248)
Q Consensus 122 ~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~----~~~~~yd~y~fvt~~~l~~l~~~~ligt~~l~ 197 (248)
+|+|.+|++|++|+.|++||++.= +- +.+..++. ..+.-+|+-.+|.-...-++.+|.+. +
T Consensus 586 Sp~Gr~LaSg~ed~~I~iWDl~~~-------~~---v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~-----~ 650 (707)
T KOG0263|consen 586 SPCGRYLASGDEDGLIKIWDLANG-------SL---VKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLT-----K 650 (707)
T ss_pred cCCCceEeecccCCcEEEEEcCCC-------cc---hhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEch-----h
Confidence 999999999999999999999861 11 22222321 12344789999998888888888644 3
Q ss_pred ccceeeeechhhHHHHh
Q psy2083 198 AYMHGFFMDIRLYRKAK 214 (248)
Q Consensus 198 ~ymhgyf~~~~ly~~~~ 214 (248)
++|-|+..+..+++.++
T Consensus 651 ~~~~~~~~~~~~~~~~~ 667 (707)
T KOG0263|consen 651 VIELLNLGHISTSNSAI 667 (707)
T ss_pred hcccccccccccccccc
Confidence 44447777777775544
No 6
>KOG0272|consensus
Probab=99.72 E-value=9.5e-18 Score=155.39 Aligned_cols=126 Identities=10% Similarity=0.189 Sum_probs=108.9
Q ss_pred chhcC-ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCC
Q psy2083 7 RQDKG-SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 7 ~~~~G-~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d 84 (248)
...++ ..++.+++| ...|..++|.|+|.+|.+++-|. +.+|||++++..+.. .+| ..+|.+|+|++|
T Consensus 246 w~~~~e~~l~~l~gH-~~RVs~VafHPsG~~L~TasfD~--------tWRlWD~~tk~ElL~QEGH--s~~v~~iaf~~D 314 (459)
T KOG0272|consen 246 WKLSQETPLQDLEGH-LARVSRVAFHPSGKFLGTASFDS--------TWRLWDLETKSELLLQEGH--SKGVFSIAFQPD 314 (459)
T ss_pred eccCCCcchhhhhcc-hhhheeeeecCCCceeeeccccc--------chhhcccccchhhHhhccc--ccccceeEecCC
Confidence 33344 577777877 68999999999988898988887 999999999876554 455 489999999999
Q ss_pred c--eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 85 Y--VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 85 ~--l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ ++| +.|..-||||+++|+++-.+++ |..+|-+|.|+|||-.|++|+.|+++++|++..
T Consensus 315 GSL~~tGGlD~~~RvWDlRtgr~im~L~g-H~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~ 376 (459)
T KOG0272|consen 315 GSLAATGGLDSLGRVWDLRTGRCIMFLAG-HIKEILSVAFSPNGYHLATGSSDNTCKVWDLRM 376 (459)
T ss_pred CceeeccCccchhheeecccCcEEEEecc-cccceeeEeECCCceEEeecCCCCcEEEeeecc
Confidence 9 333 4799999999999999999999 799999999999999999999999999999865
No 7
>KOG0272|consensus
Probab=99.71 E-value=4.5e-17 Score=150.94 Aligned_cols=124 Identities=14% Similarity=0.224 Sum_probs=110.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d 84 (248)
-|.++|+++-++++| ...|.++.|+|.|-.++++|+|+ ++++||||..+++.+ ..|. .-|..|.|.|.
T Consensus 330 WDlRtgr~im~L~gH-~k~I~~V~fsPNGy~lATgs~Dn--------t~kVWDLR~r~~ly~ipAH~--nlVS~Vk~~p~ 398 (459)
T KOG0272|consen 330 WDLRTGRCIMFLAGH-IKEILSVAFSPNGYHLATGSSDN--------TCKVWDLRMRSELYTIPAHS--NLVSQVKYSPQ 398 (459)
T ss_pred eecccCcEEEEeccc-ccceeeEeECCCceEEeecCCCC--------cEEEeeecccccceeccccc--chhhheEeccc
Confidence 478999999999996 89999999999665577777776 999999999988765 4665 78999999995
Q ss_pred c---ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 85 Y---VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 85 ~---l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
. ++ ++-|+++|||..+++.++.++.+ |...|-++..+|||..|++++-|+++++|.
T Consensus 399 ~g~fL~TasyD~t~kiWs~~~~~~~ksLaG-He~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 399 EGYFLVTASYDNTVKIWSTRTWSPLKSLAG-HEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred CCeEEEEcccCcceeeecCCCcccchhhcC-CccceEEEEeccCCceEEEeccCceeeecc
Confidence 3 44 46799999999999999999999 799999999999999999999999999995
No 8
>KOG0263|consensus
Probab=99.71 E-value=5.1e-17 Score=159.12 Aligned_cols=123 Identities=13% Similarity=0.271 Sum_probs=107.3
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS 88 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S 88 (248)
-+.++.|.+| .+.|.++.|.|++.+++++|+|. +||+||+.+|..+.++. +|..||.+|+|+|++ ++|
T Consensus 525 ~~PlRifagh-lsDV~cv~FHPNs~Y~aTGSsD~--------tVRlWDv~~G~~VRiF~-GH~~~V~al~~Sp~Gr~LaS 594 (707)
T KOG0263|consen 525 NKPLRIFAGH-LSDVDCVSFHPNSNYVATGSSDR--------TVRLWDVSTGNSVRIFT-GHKGPVTALAFSPCGRYLAS 594 (707)
T ss_pred CCchhhhccc-ccccceEEECCcccccccCCCCc--------eEEEEEcCCCcEEEEec-CCCCceEEEEEcCCCceEee
Confidence 3455665665 78999999999888888887775 99999999998888773 456999999999998 666
Q ss_pred e-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 89 M-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 89 s-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ +|+.|+|||+.+|+.+..+.+ |...|+++.|+.||+.|++|+.|.+|.+||+-.
T Consensus 595 g~ed~~I~iWDl~~~~~v~~l~~-Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 595 GDEDGLIKIWDLANGSLVKQLKG-HTGTIYSLSFSRDGNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred cccCCcEEEEEcCCCcchhhhhc-ccCceeEEEEecCCCEEEecCCCCeEEEEEchh
Confidence 4 799999999999999999998 699999999999999999999999999998643
No 9
>KOG0266|consensus
Probab=99.71 E-value=1.8e-16 Score=151.83 Aligned_cols=121 Identities=14% Similarity=0.356 Sum_probs=101.7
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--eee-
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY--VLS- 88 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~--l~S- 88 (248)
.+.++.+| ...|++++|+|++..+++++.|. +|++||+..+ +.+.+. .+|..+|++++|+|++ ++|
T Consensus 195 ~~~~l~~h-~~~v~~~~fs~d~~~l~s~s~D~--------tiriwd~~~~~~~~~~l-~gH~~~v~~~~f~p~g~~i~Sg 264 (456)
T KOG0266|consen 195 LLRELSGH-TRGVSDVAFSPDGSYLLSGSDDK--------TLRIWDLKDDGRNLKTL-KGHSTYVTSVAFSPDGNLLVSG 264 (456)
T ss_pred hhcccccc-ccceeeeEECCCCcEEEEecCCc--------eEEEeeccCCCeEEEEe-cCCCCceEEEEecCCCCEEEEe
Confidence 44445444 78999999999887777777775 9999999655 555553 2455999999999998 444
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++|++|||||.++|+++..+.+ |...|++++|++|+.+|++++.|+.|++|++-.
T Consensus 265 s~D~tvriWd~~~~~~~~~l~~-hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~ 319 (456)
T KOG0266|consen 265 SDDGTVRIWDVRTGECVRKLKG-HSDGISGLAFSPDGNLLVSASYDGTIRVWDLET 319 (456)
T ss_pred cCCCcEEEEeccCCeEEEeeec-cCCceEEEEECCCCCEEEEcCCCccEEEEECCC
Confidence 6899999999999999999999 699999999999999999999999999999754
No 10
>KOG0279|consensus
Probab=99.70 E-value=2e-16 Score=140.60 Aligned_cols=128 Identities=11% Similarity=0.152 Sum_probs=111.1
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~- 85 (248)
|..+|+..+-|.+| ...|.+++|++|+..+++++.|. +|+||++-....+..-++++...|++|.|+|+.
T Consensus 91 Dl~~g~~t~~f~GH-~~dVlsva~s~dn~qivSGSrDk--------Tiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~ 161 (315)
T KOG0279|consen 91 DLATGESTRRFVGH-TKDVLSVAFSTDNRQIVSGSRDK--------TIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNES 161 (315)
T ss_pred EecCCcEEEEEEec-CCceEEEEecCCCceeecCCCcc--------eeeeeeecccEEEEEecCCCcCcEEEEEEcCCCC
Confidence 45567777777776 78999999999999999988887 999999988766665565556899999999984
Q ss_pred ---eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 ---VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 ---l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|++ +.|++||+||.++-+..+++-+ |...+|-++++|||.++++|+.|+++.+|++.+
T Consensus 162 ~p~Ivs~s~DktvKvWnl~~~~l~~~~~g-h~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~ 223 (315)
T KOG0279|consen 162 NPIIVSASWDKTVKVWNLRNCQLRTTFIG-HSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNE 223 (315)
T ss_pred CcEEEEccCCceEEEEccCCcchhhcccc-ccccEEEEEECCCCCEEecCCCCceEEEEEccC
Confidence 554 6899999999999999999988 699999999999999999999999999999754
No 11
>KOG0286|consensus
Probab=99.70 E-value=2.6e-16 Score=140.68 Aligned_cols=116 Identities=12% Similarity=0.245 Sum_probs=100.5
Q ss_pred EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcC-Cc---eeeeCCC
Q psy2083 17 IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHD-NY---VLSMDSS 92 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~-d~---l~Ssdd~ 92 (248)
+.+| .+.+ ++|-|.+++.++++++|. ++.||||.+++.+..+ |+|...|.++.+.| +. |.++-|+
T Consensus 141 l~gH-tgyl-ScC~f~dD~~ilT~SGD~--------TCalWDie~g~~~~~f-~GH~gDV~slsl~p~~~ntFvSg~cD~ 209 (343)
T KOG0286|consen 141 LAGH-TGYL-SCCRFLDDNHILTGSGDM--------TCALWDIETGQQTQVF-HGHTGDVMSLSLSPSDGNTFVSGGCDK 209 (343)
T ss_pred ecCc-ccee-EEEEEcCCCceEecCCCc--------eEEEEEcccceEEEEe-cCCcccEEEEecCCCCCCeEEeccccc
Confidence 4454 5555 555565578899999997 9999999999887776 56679999999999 44 6667899
Q ss_pred eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 93 VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 93 ~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
..||||.+.|.++++|++ |.++||+|+|+|+|--+++|++|++.++||+.+
T Consensus 210 ~aklWD~R~~~c~qtF~g-hesDINsv~ffP~G~afatGSDD~tcRlyDlRa 260 (343)
T KOG0286|consen 210 SAKLWDVRSGQCVQTFEG-HESDINSVRFFPSGDAFATGSDDATCRLYDLRA 260 (343)
T ss_pred ceeeeeccCcceeEeecc-cccccceEEEccCCCeeeecCCCceeEEEeecC
Confidence 999999999999999999 699999999999999999999999999999876
No 12
>KOG0266|consensus
Probab=99.70 E-value=4.6e-16 Score=148.95 Aligned_cols=125 Identities=14% Similarity=0.328 Sum_probs=105.5
Q ss_pred hcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc--
Q psy2083 9 DKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY-- 85 (248)
Q Consensus 9 ~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~-- 85 (248)
..|+++.++.+| ...|++++|+|++.++++|+.|. +|+|||+++++++... .|. .+|++++|++++
T Consensus 234 ~~~~~~~~l~gH-~~~v~~~~f~p~g~~i~Sgs~D~--------tvriWd~~~~~~~~~l~~hs--~~is~~~f~~d~~~ 302 (456)
T KOG0266|consen 234 DDGRNLKTLKGH-STYVTSVAFSPDGNLLVSGSDDG--------TVRIWDVRTGECVRKLKGHS--DGISGLAFSPDGNL 302 (456)
T ss_pred CCCeEEEEecCC-CCceEEEEecCCCCEEEEecCCC--------cEEEEeccCCeEEEeeeccC--CceEEEEECCCCCE
Confidence 457899999876 79999999999986566666664 9999999999988775 554 899999999998
Q ss_pred eee-eCCCeEEEEECCCCC--EEEEeecCCCC--CeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 86 VLS-MDSSVVKIWSKDNGS--LFTCIESGDQT--QFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 86 l~S-sdd~~IKIWD~~tGk--~~~tie~~h~~--~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
+++ +.|+.|+|||..+|. ++..+..+ .. ++++++|+|++.++++++.|+++++|++...
T Consensus 303 l~s~s~d~~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~ 366 (456)
T KOG0266|consen 303 LVSASYDGTIRVWDLETGSKLCLKLLSGA-ENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSG 366 (456)
T ss_pred EEEcCCCccEEEEECCCCceeeeecccCC-CCCCceeEEEECCCCcEEEEecCCCeEEEEEccCC
Confidence 444 569999999999999 56777662 33 5999999999999999999999999998764
No 13
>PTZ00421 coronin; Provisional
Probab=99.69 E-value=8.9e-16 Score=148.63 Aligned_cols=117 Identities=15% Similarity=0.261 Sum_probs=96.8
Q ss_pred EecCCCCCeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCC-------ceeEEecCCCCCCeeEEEEcCCc---
Q psy2083 17 IESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRAD-------KPLRVKDHMYGLPIRDIKFHDNY--- 85 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-------~pl~~~~h~~~~pI~sI~F~~d~--- 85 (248)
+.+ |.+.|.+++|+| ++..+++++.|+ +|++||+..+ .|+... .+|..+|.+|+|+|+.
T Consensus 71 l~G-H~~~V~~v~fsP~d~~~LaSgS~Dg--------tIkIWdi~~~~~~~~~~~~l~~L-~gH~~~V~~l~f~P~~~~i 140 (493)
T PTZ00421 71 LLG-QEGPIIDVAFNPFDPQKLFTASEDG--------TIMGWGIPEEGLTQNISDPIVHL-QGHTKKVGIVSFHPSAMNV 140 (493)
T ss_pred EeC-CCCCEEEEEEcCCCCCEEEEEeCCC--------EEEEEecCCCccccccCcceEEe-cCCCCcEEEEEeCcCCCCE
Confidence 444 478999999999 555576776664 9999999865 345443 2445899999999973
Q ss_pred eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+++ +.|++|+|||.++++.+..+.. |...|++++|+|+|.+|++++.|++|++|++..
T Consensus 141 LaSgs~DgtVrIWDl~tg~~~~~l~~-h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rs 199 (493)
T PTZ00421 141 LASAGADMVVNVWDVERGKAVEVIKC-HSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRD 199 (493)
T ss_pred EEEEeCCCEEEEEECCCCeEEEEEcC-CCCceEEEEEECCCCEEEEecCCCEEEEEECCC
Confidence 444 6899999999999999999988 689999999999999999999999999999764
No 14
>KOG0271|consensus
Probab=99.68 E-value=2e-16 Score=145.59 Aligned_cols=121 Identities=11% Similarity=0.213 Sum_probs=105.0
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc--eee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY--VLS 88 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~--l~S 88 (248)
+|-.+|.+| ...|.++.|+|++..|+++++|. ||||||+.+..|+.+ +.|. ..|.+|+|+||+ |+|
T Consensus 106 rCssS~~GH-~e~Vl~~~fsp~g~~l~tGsGD~--------TvR~WD~~TeTp~~t~KgH~--~WVlcvawsPDgk~iAS 174 (480)
T KOG0271|consen 106 RCSSSIAGH-GEAVLSVQFSPTGSRLVTGSGDT--------TVRLWDLDTETPLFTCKGHK--NWVLCVAWSPDGKKIAS 174 (480)
T ss_pred eeccccCCC-CCcEEEEEecCCCceEEecCCCc--------eEEeeccCCCCcceeecCCc--cEEEEEEECCCcchhhc
Confidence 466667776 69999999999888899999987 999999999999876 6666 899999999998 665
Q ss_pred -eCCCeEEEEECCCCCEEE-EeecCCCCCeeEEEEe-----CCCCEEEEEeCCCeEEEEEcCC
Q psy2083 89 -MDSSVVKIWSKDNGSLFT-CIESGDQTQFNNLCHI-----PESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 89 -sdd~~IKIWD~~tGk~~~-tie~~h~~~In~l~~~-----pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+-|++|++||+++|+++. ++.+ |...|++++|. |.+++|++++.|+.|.+|++-.
T Consensus 175 G~~dg~I~lwdpktg~~~g~~l~g-H~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~ 236 (480)
T KOG0271|consen 175 GSKDGSIRLWDPKTGQQIGRALRG-HKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKL 236 (480)
T ss_pred cccCCeEEEecCCCCCcccccccC-cccceeEEeecccccCCCccceecccCCCCEEEEEccC
Confidence 579999999999998775 4555 79999999995 5889999999999999999754
No 15
>KOG0315|consensus
Probab=99.68 E-value=8.1e-16 Score=135.23 Aligned_cols=127 Identities=17% Similarity=0.307 Sum_probs=106.5
Q ss_pred chhcCc--eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC
Q psy2083 7 RQDKGS--LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 7 ~~~~G~--~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
|.+++. .+++|++| ..+|..+.|.-++.+++++|+|+ +|||||+|+...-..+.|. .||++|..||+
T Consensus 67 D~~S~np~Pv~t~e~h-~kNVtaVgF~~dgrWMyTgseDg--------t~kIWdlR~~~~qR~~~~~--spVn~vvlhpn 135 (311)
T KOG0315|consen 67 DLNSNNPNPVATFEGH-TKNVTAVGFQCDGRWMYTGSEDG--------TVKIWDLRSLSCQRNYQHN--SPVNTVVLHPN 135 (311)
T ss_pred EccCCCCCceeEEecc-CCceEEEEEeecCeEEEecCCCc--------eEEEEeccCcccchhccCC--CCcceEEecCC
Confidence 344444 68999997 79999999999999999988885 9999999995444445554 99999999999
Q ss_pred c--eeeeC-CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 85 Y--VLSMD-SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 85 ~--l~Ssd-d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
. ++++| ++-|+|||+.+..+...+-|....+|+++++.|||.+++.++..|+..+|.++.
T Consensus 136 QteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~ 198 (311)
T KOG0315|consen 136 QTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLN 198 (311)
T ss_pred cceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccC
Confidence 7 77775 889999999987777777664457999999999999999999999999999765
No 16
>KOG0279|consensus
Probab=99.66 E-value=1.5e-15 Score=134.99 Aligned_cols=127 Identities=11% Similarity=0.174 Sum_probs=106.5
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~- 85 (248)
|...|.....+.+| +..|+.++.++|+.+.++++.|+ +++|||+.++++.+.+- +|...|.+|+|++|.
T Consensus 49 d~~~G~~~r~~~GH-sH~v~dv~~s~dg~~alS~swD~--------~lrlWDl~~g~~t~~f~-GH~~dVlsva~s~dn~ 118 (315)
T KOG0279|consen 49 DIKYGVPVRRLTGH-SHFVSDVVLSSDGNFALSASWDG--------TLRLWDLATGESTRRFV-GHTKDVLSVAFSTDNR 118 (315)
T ss_pred ccccCceeeeeecc-ceEecceEEccCCceEEeccccc--------eEEEEEecCCcEEEEEE-ecCCceEEEEecCCCc
Confidence 45568888888885 79999999999988888888885 99999999998877762 344889999999987
Q ss_pred -eee-eCCCeEEEEECCCCCEEEEeecC-CCCCeeEEEEeCC--CCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VLS-MDSSVVKIWSKDNGSLFTCIESG-DQTQFNNLCHIPE--SGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~S-sdd~~IKIWD~~tGk~~~tie~~-h~~~In~l~~~pd--sgll~sa~ed~~I~~w~Ip~ 144 (248)
|+| +-|++||+||.. |.+..++..+ +...|++|+|+|+ ...|++++.|+++++|++..
T Consensus 119 qivSGSrDkTiklwnt~-g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~ 181 (315)
T KOG0279|consen 119 QIVSGSRDKTIKLWNTL-GVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRN 181 (315)
T ss_pred eeecCCCcceeeeeeec-ccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCC
Confidence 555 679999999998 6666666642 2579999999998 68999999999999999876
No 17
>KOG0284|consensus
Probab=99.65 E-value=1.5e-16 Score=147.17 Aligned_cols=116 Identities=16% Similarity=0.381 Sum_probs=99.1
Q ss_pred EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc--eee-eCCC
Q psy2083 17 IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY--VLS-MDSS 92 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~--l~S-sdd~ 92 (248)
+..||...|.+++|+|.+...+++++|+ +|+|||.+.+++-.+ .+|+ --|++|.|||.. |+| +.|+
T Consensus 175 ~~ahh~eaIRdlafSpnDskF~t~SdDg--------~ikiWdf~~~kee~vL~GHg--wdVksvdWHP~kgLiasgskDn 244 (464)
T KOG0284|consen 175 IQAHHAEAIRDLAFSPNDSKFLTCSDDG--------TIKIWDFRMPKEERVLRGHG--WDVKSVDWHPTKGLIASGSKDN 244 (464)
T ss_pred hhHhhhhhhheeccCCCCceeEEecCCC--------eEEEEeccCCchhheeccCC--CCcceeccCCccceeEEccCCc
Confidence 3456567899999999776565665554 999999999877544 4555 789999999997 555 5788
Q ss_pred eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 93 VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 93 ~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
.||+||+++|.++.++.. |...|..+.|.|++.+|++++.|..+++|||.
T Consensus 245 lVKlWDprSg~cl~tlh~-HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR 294 (464)
T KOG0284|consen 245 LVKLWDPRSGSCLATLHG-HKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIR 294 (464)
T ss_pred eeEeecCCCcchhhhhhh-ccceEEEEEEcCCCCeeEEccCCceEEEEehh
Confidence 999999999999999998 79999999999999999999999999999986
No 18
>KOG0291|consensus
Probab=99.64 E-value=2.4e-15 Score=147.31 Aligned_cols=116 Identities=13% Similarity=0.215 Sum_probs=99.3
Q ss_pred cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEE
Q psy2083 19 SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVK 95 (248)
Q Consensus 19 ~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IK 95 (248)
.+|...++++.++||++.+++|++|+ +||+||.+++-++.++. .|...|+.++|+..+ +.+|-||+||
T Consensus 347 QgH~~~i~~l~YSpDgq~iaTG~eDg--------KVKvWn~~SgfC~vTFt-eHts~Vt~v~f~~~g~~llssSLDGtVR 417 (893)
T KOG0291|consen 347 QGHSDRITSLAYSPDGQLIATGAEDG--------KVKVWNTQSGFCFVTFT-EHTSGVTAVQFTARGNVLLSSSLDGTVR 417 (893)
T ss_pred cccccceeeEEECCCCcEEEeccCCC--------cEEEEeccCceEEEEec-cCCCceEEEEEEecCCEEEEeecCCeEE
Confidence 45588999999999998888888875 89999999999998874 334889999999987 4456799999
Q ss_pred EEECCCCCEEEEeec-------------------------------------------CCCCCeeEEEEeCCCCEEEEEe
Q psy2083 96 IWSKDNGSLFTCIES-------------------------------------------GDQTQFNNLCHIPESGMMFIAN 132 (248)
Q Consensus 96 IWD~~tGk~~~tie~-------------------------------------------~h~~~In~l~~~pdsgll~sa~ 132 (248)
.||...++++.++.. +|+.||.+++|+|++..|++|+
T Consensus 418 AwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~S 497 (893)
T KOG0291|consen 418 AWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGS 497 (893)
T ss_pred eeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEecc
Confidence 999987777666432 3899999999999999999999
Q ss_pred CCCeEEEEEcC
Q psy2083 133 ENKKILTYYIP 143 (248)
Q Consensus 133 ed~~I~~w~Ip 143 (248)
.|.+|++|+|-
T Consensus 498 WDkTVRiW~if 508 (893)
T KOG0291|consen 498 WDKTVRIWDIF 508 (893)
T ss_pred ccceEEEEEee
Confidence 99999999873
No 19
>PTZ00420 coronin; Provisional
Probab=99.63 E-value=1.2e-14 Score=142.63 Aligned_cols=120 Identities=13% Similarity=0.096 Sum_probs=95.9
Q ss_pred eeEEEecCCCCCeeEEEEeCCCC-cEEEeecCceeeeecCCeeEEEEcCCCc--------eeEEecCCCCCCeeEEEEcC
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPAFYLYDIRADK--------PLRVKDHMYGLPIRDIKFHD 83 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g-~l~~ag~d~~~~~~~~G~V~LwDlRs~~--------pl~~~~h~~~~pI~sI~F~~ 83 (248)
.+..+.+| .+.|.+++|+|+.+ +++++|.|+ +|+|||++++. |+... .+|..+|.+|+|+|
T Consensus 66 ~v~~L~gH-~~~V~~lafsP~~~~lLASgS~Dg--------tIrIWDi~t~~~~~~~i~~p~~~L-~gH~~~V~sVaf~P 135 (568)
T PTZ00420 66 PVIKLKGH-TSSILDLQFNPCFSEILASGSEDL--------TIRVWEIPHNDESVKEIKDPQCIL-KGHKKKISIIDWNP 135 (568)
T ss_pred eEEEEcCC-CCCEEEEEEcCCCCCEEEEEeCCC--------eEEEEECCCCCccccccccceEEe-ecCCCcEEEEEECC
Confidence 45556665 78999999999744 566666664 99999998752 33332 23458999999999
Q ss_pred Cc---eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 84 NY---VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 84 d~---l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ +++ +.|++|+|||+++++....+.. ...|.+++|+|+|.+|++++.|++|++|++..
T Consensus 136 ~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~--~~~V~SlswspdG~lLat~s~D~~IrIwD~Rs 198 (568)
T PTZ00420 136 MNYYIMCSSGFDSFVNIWDIENEKRAFQINM--PKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRK 198 (568)
T ss_pred CCCeEEEEEeCCCeEEEEECCCCcEEEEEec--CCcEEEEEECCCCCEEEEEecCCEEEEEECCC
Confidence 86 334 6799999999999998888864 67899999999999999999999999999865
No 20
>KOG0276|consensus
Probab=99.63 E-value=1e-15 Score=147.54 Aligned_cols=131 Identities=11% Similarity=0.221 Sum_probs=111.7
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-----e
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-----V 86 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-----l 86 (248)
.|.++|++| +..|-.++|.|.+...|++++-+ +|||+|.+-++.|..+.. +|...||+|.|-+.+ |
T Consensus 131 a~~qtfeGH-~HyVMqv~fnPkD~ntFaS~sLD-------rTVKVWslgs~~~nfTl~-gHekGVN~Vdyy~~gdkpylI 201 (794)
T KOG0276|consen 131 ACEQTFEGH-EHYVMQVAFNPKDPNTFASASLD-------RTVKVWSLGSPHPNFTLE-GHEKGVNCVDYYTGGDKPYLI 201 (794)
T ss_pred eeeeEEcCc-ceEEEEEEecCCCccceeeeecc-------ccEEEEEcCCCCCceeee-ccccCcceEEeccCCCcceEE
Confidence 377888887 79999999999887777665554 399999999999988764 555889999998765 5
Q ss_pred eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC--------CCCCCCCcc
Q psy2083 87 LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP--------SLGPAPKWC 152 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip--------~lG~aP~wc 152 (248)
.++||.+|||||..|..|++++++ |...|+.++|+|.=.+|++|+||++|++|--. .+|-.-.||
T Consensus 202 sgaDD~tiKvWDyQtk~CV~TLeG-Ht~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~ 274 (794)
T KOG0276|consen 202 SGADDLTIKVWDYQTKSCVQTLEG-HTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWC 274 (794)
T ss_pred ecCCCceEEEeecchHHHHHHhhc-ccccceEEEecCCCcEEEEecCCccEEEecCcceehhhhhhcCCceEEE
Confidence 557999999999999999999999 79999999999999999999999999999632 346666788
No 21
>KOG0302|consensus
Probab=99.61 E-value=9.1e-15 Score=134.39 Aligned_cols=161 Identities=17% Similarity=0.336 Sum_probs=118.6
Q ss_pred CCCCeeEEEEeCC-CCcEEEeecCceeeeecCCeeEEEEcCCC---ceeEEecCCCCCCeeEEEEcCCc--eee-eCCCe
Q psy2083 21 DQTQFNNLCHIPE-SGMMFIANENKKILTYYIPAFYLYDIRAD---KPLRVKDHMYGLPIRDIKFHDNY--VLS-MDSSV 93 (248)
Q Consensus 21 ~~~~V~~~~~~~~-~g~l~~ag~d~~~~~~~~G~V~LwDlRs~---~pl~~~~h~~~~pI~sI~F~~d~--l~S-sdd~~ 93 (248)
|...|-+++++|. +++++++|-| |+|+|||+|++ ..+.++.|+ .-||-|.|+.+. |+| +|+++
T Consensus 256 H~~SVEDLqWSptE~~vfaScS~D--------gsIrIWDiRs~~~~~~~~~kAh~--sDVNVISWnr~~~lLasG~DdGt 325 (440)
T KOG0302|consen 256 HTKSVEDLQWSPTEDGVFASCSCD--------GSIRIWDIRSGPKKAAVSTKAHN--SDVNVISWNRREPLLASGGDDGT 325 (440)
T ss_pred cccchhhhccCCccCceEEeeecC--------ceEEEEEecCCCccceeEeeccC--CceeeEEccCCcceeeecCCCce
Confidence 5788999999985 4445565556 49999999998 346677776 789999999876 555 48999
Q ss_pred EEEEECCC---CCEEEEeecCCCCCeeEEEEeCC-CCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhccccc-
Q psy2083 94 VKIWSKDN---GSLFTCIESGDQTQFNNLCHIPE-SGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIE- 168 (248)
Q Consensus 94 IKIWD~~t---Gk~~~tie~~h~~~In~l~~~pd-sgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~~- 168 (248)
++|||+++ |++++++.- |.++|+++.|+|. .+.|+++++|.+|.+|++. +|.=-||-.+.+..
T Consensus 326 ~~iwDLR~~~~~~pVA~fk~-Hk~pItsieW~p~e~s~iaasg~D~QitiWDls-----------vE~D~ee~~~~a~~~ 393 (440)
T KOG0302|consen 326 LSIWDLRQFKSGQPVATFKY-HKAPITSIEWHPHEDSVIAASGEDNQITIWDLS-----------VEADEEEIDQEAAEG 393 (440)
T ss_pred EEEEEhhhccCCCcceeEEe-ccCCeeEEEeccccCceEEeccCCCcEEEEEee-----------ccCChhhhccccccc
Confidence 99999986 789999998 7999999999994 5888999999999999974 22222333332222
Q ss_pred --cccCCceeec--HhHHhhcCCccccCCCcccccceee
Q psy2083 169 --NVYDDYKFVT--RQELEDLGLGHLIGTSLLRAYMHGF 203 (248)
Q Consensus 169 --~~yd~y~fvt--~~~l~~l~~~~ligt~~l~~ymhgy 203 (248)
.+-..--||- ..|+++|---..|..=++..-|-||
T Consensus 394 L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGf 432 (440)
T KOG0302|consen 394 LQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGF 432 (440)
T ss_pred hhcCCceeEEEecchhHhhhheeccCCCCeEEEecccce
Confidence 3555677886 6788888664444332444445554
No 22
>KOG0310|consensus
Probab=99.60 E-value=8.8e-15 Score=137.57 Aligned_cols=129 Identities=10% Similarity=0.122 Sum_probs=104.8
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+..++...+.+.+| .+.|.+..++|.++.++.+|+.+ |+|||||+|+. .++...+|+ .||-+|.|.|.+
T Consensus 139 d~s~a~v~~~l~~h-tDYVR~g~~~~~~~hivvtGsYD-------g~vrl~DtR~~~~~v~elnhg--~pVe~vl~lpsg 208 (487)
T KOG0310|consen 139 DLSTAYVQAELSGH-TDYVRCGDISPANDHIVVTGSYD-------GKVRLWDTRSLTSRVVELNHG--CPVESVLALPSG 208 (487)
T ss_pred EcCCcEEEEEecCC-cceeEeeccccCCCeEEEecCCC-------ceEEEEEeccCCceeEEecCC--CceeeEEEcCCC
Confidence 44445554466665 89999999999888766555543 69999999998 677778877 999999999996
Q ss_pred --eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 86 --VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 86 --l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
|+++....||+||..+|..+.+...+|...|+|+++..+|..|++|+-|+.|++|++..+
T Consensus 209 s~iasAgGn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~ 270 (487)
T KOG0310|consen 209 SLIASAGGNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNY 270 (487)
T ss_pred CEEEEcCCCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccce
Confidence 888889999999999765544444447899999999999999999999999999995443
No 23
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.60 E-value=2.8e-14 Score=119.80 Aligned_cols=124 Identities=12% Similarity=0.267 Sum_probs=105.3
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d 84 (248)
+|..+++.+..+..+ .+.|..+++.|++..+++++.++ .|++||+++++++... .|. .+|.++.|+++
T Consensus 162 ~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~~~--------~i~i~d~~~~~~~~~~~~~~--~~i~~~~~~~~ 230 (289)
T cd00200 162 WDLRTGKCVATLTGH-TGEVNSVAFSPDGEKLLSSSSDG--------TIKLWDLSTGKCLGTLRGHE--NGVNSVAFSPD 230 (289)
T ss_pred EEccccccceeEecC-ccccceEEECCCcCEEEEecCCC--------cEEEEECCCCceecchhhcC--CceEEEEEcCC
Confidence 455567777777765 57899999999877787777764 8999999998887766 554 69999999997
Q ss_pred c--eeeeC-CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 85 Y--VLSMD-SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 85 ~--l~Ssd-d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+ +++++ ++.|++||..++++...+.. |...|++++|+|++..|++++.|+.|++|+
T Consensus 231 ~~~~~~~~~~~~i~i~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 231 GYLLASGSEDGTIRVWDLRTGECVQTLSG-HTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred CcEEEEEcCCCcEEEEEcCCceeEEEccc-cCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 6 55555 99999999999999999987 588999999999999999999999999994
No 24
>KOG0265|consensus
Probab=99.59 E-value=7.9e-15 Score=131.53 Aligned_cols=134 Identities=11% Similarity=0.238 Sum_probs=113.7
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|+.+|+++..+.+| .+.||.++-..-+-.++.+++|+ |++||||+|+..++.++... .+++++.|..++
T Consensus 117 wD~~tG~~~rk~k~h-~~~vNs~~p~rrg~~lv~SgsdD-------~t~kl~D~R~k~~~~t~~~k--yqltAv~f~d~s 186 (338)
T KOG0265|consen 117 WDAETGKRIRKHKGH-TSFVNSLDPSRRGPQLVCSGSDD-------GTLKLWDIRKKEAIKTFENK--YQLTAVGFKDTS 186 (338)
T ss_pred Eecccceeeehhccc-cceeeecCccccCCeEEEecCCC-------ceEEEEeecccchhhccccc--eeEEEEEecccc
Confidence 688999999998887 67777777333344466666665 59999999999888877544 679999999886
Q ss_pred --eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCC
Q psy2083 86 --VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPK 150 (248)
Q Consensus 86 --l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~ 150 (248)
+.| +-|+.||+||++.++.+.++.+ |..+|+++..+|+|..+++-+.|.++++||+...-|+-|
T Consensus 187 ~qv~sggIdn~ikvWd~r~~d~~~~lsG-h~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R 253 (338)
T KOG0265|consen 187 DQVISGGIDNDIKVWDLRKNDGLYTLSG-HADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQR 253 (338)
T ss_pred cceeeccccCceeeeccccCcceEEeec-ccCceeeEEeccCCCccccccccceEEEEEecccCCCCc
Confidence 555 5799999999999999999999 699999999999999999999999999999998888876
No 25
>KOG0271|consensus
Probab=99.57 E-value=5.1e-14 Score=129.84 Aligned_cols=127 Identities=9% Similarity=0.154 Sum_probs=104.8
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~- 85 (248)
|..+...+.+..+| ...|-++.++||+..+++++-++ +|+|||-.++.++-..--+|..+|++++|.|-.
T Consensus 143 D~~TeTp~~t~KgH-~~WVlcvawsPDgk~iASG~~dg--------~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl 213 (480)
T KOG0271|consen 143 DLDTETPLFTCKGH-KNWVLCVAWSPDGKKIASGSKDG--------SIRLWDPKTGQQIGRALRGHKKWITALAWEPLHL 213 (480)
T ss_pred ccCCCCcceeecCC-ccEEEEEEECCCcchhhccccCC--------eEEEecCCCCCcccccccCcccceeEEeeccccc
Confidence 34445566666665 78999999999988888877774 999999999988766545666999999998742
Q ss_pred ------eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 ------VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 ------l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++| +-|+.|+|||..-|+++.++.+ |..+|+|+++- ..|+|.+|+.|++|++|..-.
T Consensus 214 ~p~~r~las~skDg~vrIWd~~~~~~~~~lsg-HT~~VTCvrwG-G~gliySgS~DrtIkvw~a~d 277 (480)
T KOG0271|consen 214 VPPCRRLASSSKDGSVRIWDTKLGTCVRTLSG-HTASVTCVRWG-GEGLIYSGSQDRTIKVWRALD 277 (480)
T ss_pred CCCccceecccCCCCEEEEEccCceEEEEecc-CccceEEEEEc-CCceEEecCCCceEEEEEccc
Confidence 555 4699999999999999999998 79999999994 346999999999999998644
No 26
>KOG0273|consensus
Probab=99.55 E-value=4.6e-14 Score=132.54 Aligned_cols=121 Identities=12% Similarity=0.181 Sum_probs=100.7
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-------
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY------- 85 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~------- 85 (248)
+..++.+| .+.|+.+.|.|.+.+|+++++|. |++||.+..+...... |.|...|..|.|+|++
T Consensus 351 P~~t~~GH-~g~V~alk~n~tg~LLaS~SdD~--------TlkiWs~~~~~~~~~l-~~Hskei~t~~wsp~g~v~~n~~ 420 (524)
T KOG0273|consen 351 PVKTFIGH-HGEVNALKWNPTGSLLASCSDDG--------TLKIWSMGQSNSVHDL-QAHSKEIYTIKWSPTGPVTSNPN 420 (524)
T ss_pred cceeeecc-cCceEEEEECCCCceEEEecCCC--------eeEeeecCCCcchhhh-hhhccceeeEeecCCCCccCCCc
Confidence 55666665 59999999999776666666664 9999998877665543 3445789999999863
Q ss_pred ----eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 ----VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 ----l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+++ +-|.+||+||+..|.++++|.. |..+|-+|+|+|||.++++|+-|+.|++|.++.
T Consensus 421 ~~~~l~sas~dstV~lwdv~~gv~i~~f~k-H~~pVysvafS~~g~ylAsGs~dg~V~iws~~~ 483 (524)
T KOG0273|consen 421 MNLMLASASFDSTVKLWDVESGVPIHTLMK-HQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKT 483 (524)
T ss_pred CCceEEEeecCCeEEEEEccCCceeEeecc-CCCceEEEEecCCCcEEEecCCCCeeEeccccc
Confidence 444 5799999999999999999988 699999999999999999999999999998764
No 27
>PTZ00420 coronin; Provisional
Probab=99.55 E-value=2.3e-13 Score=133.68 Aligned_cols=121 Identities=6% Similarity=0.036 Sum_probs=95.0
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-ee
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SM 89 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ss 89 (248)
+..+.+| ...|.+++|+|++..++ ++|.|+ +|+|||+++++.+....|. .+|.+++|++++ ++ ++
T Consensus 118 ~~~L~gH-~~~V~sVaf~P~g~~iLaSgS~Dg--------tIrIWDl~tg~~~~~i~~~--~~V~SlswspdG~lLat~s 186 (568)
T PTZ00420 118 QCILKGH-KKKISIIDWNPMNYYIMCSSGFDS--------FVNIWDIENEKRAFQINMP--KKLSSLKWNIKGNLLSGTC 186 (568)
T ss_pred eEEeecC-CCcEEEEEECCCCCeEEEEEeCCC--------eEEEEECCCCcEEEEEecC--CcEEEEEECCCCCEEEEEe
Confidence 3445554 78999999999877654 555554 9999999999876666554 689999999998 44 45
Q ss_pred CCCeEEEEECCCCCEEEEeecCCCCCeeEEE-----EeCCCCEEEEEeCC----CeEEEEEcCCCC
Q psy2083 90 DSSVVKIWSKDNGSLFTCIESGDQTQFNNLC-----HIPESGMMFIANEN----KKILTYYIPSLG 146 (248)
Q Consensus 90 dd~~IKIWD~~tGk~~~tie~~h~~~In~l~-----~~pdsgll~sa~ed----~~I~~w~Ip~lG 146 (248)
.|+.|+|||+++|+.+.++.+ |...+++.+ |+|++++|++++.| ++|++|++..++
T Consensus 187 ~D~~IrIwD~Rsg~~i~tl~g-H~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~ 251 (568)
T PTZ00420 187 VGKHMHIIDPRKQEIASSFHI-HDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTT 251 (568)
T ss_pred cCCEEEEEECCCCcEEEEEec-ccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCC
Confidence 799999999999999999998 576655433 45899999998866 479999998754
No 28
>PTZ00421 coronin; Provisional
Probab=99.55 E-value=2.4e-13 Score=131.69 Aligned_cols=124 Identities=8% Similarity=0.195 Sum_probs=97.9
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCC-cEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL- 87 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g-~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~- 87 (248)
..+..+.+| ...|..++|+|+++ .+++++.|+ +|+|||+++++++.... .|..+|.+|+|+|++ ++
T Consensus 116 ~~l~~L~gH-~~~V~~l~f~P~~~~iLaSgs~Dg--------tVrIWDl~tg~~~~~l~-~h~~~V~sla~spdG~lLat 185 (493)
T PTZ00421 116 DPIVHLQGH-TKKVGIVSFHPSAMNVLASAGADM--------VVNVWDVERGKAVEVIK-CHSDQITSLEWNLDGSLLCT 185 (493)
T ss_pred cceEEecCC-CCcEEEEEeCcCCCCEEEEEeCCC--------EEEEEECCCCeEEEEEc-CCCCceEEEEEECCCCEEEE
Confidence 356666665 78999999999765 466666664 99999999998776652 334789999999997 44
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCCCC-eeEEEEeCCCCEEEEEe----CCCeEEEEEcCCCC
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQTQ-FNNLCHIPESGMMFIAN----ENKKILTYYIPSLG 146 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~~~-In~l~~~pdsgll~sa~----ed~~I~~w~Ip~lG 146 (248)
++.|++|+|||+++|+.+.++.+ |... +..+.|.|+++.|++++ .|++|++|++..+.
T Consensus 186 gs~Dg~IrIwD~rsg~~v~tl~~-H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~ 248 (493)
T PTZ00421 186 TSKDKKLNIIDPRDGTIVSSVEA-HASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMA 248 (493)
T ss_pred ecCCCEEEEEECCCCcEEEEEec-CCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCC
Confidence 46899999999999999999988 4544 45678899988888764 47899999998754
No 29
>KOG0278|consensus
Probab=99.55 E-value=7.7e-14 Score=123.04 Aligned_cols=114 Identities=12% Similarity=0.218 Sum_probs=92.9
Q ss_pred CCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEE
Q psy2083 21 DQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWS 98 (248)
Q Consensus 21 ~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD 98 (248)
|.+.|.++.|-..+..++++..| ++|||||.|+++-++..... .||+++..++++ |..++.+.|++||
T Consensus 142 htg~Ir~v~wc~eD~~iLSSadd--------~tVRLWD~rTgt~v~sL~~~--s~VtSlEvs~dG~ilTia~gssV~Fwd 211 (334)
T KOG0278|consen 142 HTGGIRTVLWCHEDKCILSSADD--------KTVRLWDHRTGTEVQSLEFN--SPVTSLEVSQDGRILTIAYGSSVKFWD 211 (334)
T ss_pred CCCcceeEEEeccCceEEeeccC--------CceEEEEeccCcEEEEEecC--CCCcceeeccCCCEEEEecCceeEEec
Confidence 47899999998766666666444 49999999999888876554 789999999998 5568889999999
Q ss_pred CCCCCEEEEee-----------------------------------------cCCCCCeeEEEEeCCCCEEEEEeCCCeE
Q psy2083 99 KDNGSLFTCIE-----------------------------------------SGDQTQFNNLCHIPESGMMFIANENKKI 137 (248)
Q Consensus 99 ~~tGk~~~tie-----------------------------------------~~h~~~In~l~~~pdsgll~sa~ed~~I 137 (248)
+.+-+++..++ .+|..+|.||.|+|||.+.++|++|++|
T Consensus 212 aksf~~lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTi 291 (334)
T KOG0278|consen 212 AKSFGLLKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTI 291 (334)
T ss_pred cccccceeeccCccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceE
Confidence 98765554421 1368899999999999999999999999
Q ss_pred EEEEcCC
Q psy2083 138 LTYYIPS 144 (248)
Q Consensus 138 ~~w~Ip~ 144 (248)
++|-.-.
T Consensus 292 rlWQt~~ 298 (334)
T KOG0278|consen 292 RLWQTTP 298 (334)
T ss_pred EEEEecC
Confidence 9997644
No 30
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.53 E-value=4.6e-13 Score=112.37 Aligned_cols=128 Identities=11% Similarity=0.253 Sum_probs=102.6
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
++..+++.+..+..+ ...|..+++.|++.++++++.+ |.|++||+++++++.... .+..+|.++.|+|++
T Consensus 78 ~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~--------~~i~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~ 147 (289)
T cd00200 78 WDLETGECVRTLTGH-TSYVSSVAFSPDGRILSSSSRD--------KTIKVWDVETGKCLTTLR-GHTDWVNSVAFSPDG 147 (289)
T ss_pred EEcCcccceEEEecc-CCcEEEEEEcCCCCEEEEecCC--------CeEEEEECCCcEEEEEec-cCCCcEEEEEEcCcC
Confidence 344555666666665 5689999999875544444435 389999999888776653 334789999999976
Q ss_pred --eeeeC-CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 --VLSMD-SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l~Ssd-d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++. ++.|++||.++++.+..+.. |...|++++++|++..+++++.++.|.+|++..
T Consensus 148 ~~l~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~ 208 (289)
T cd00200 148 TFVASSSQDGTIKLWDLRTGKCVATLTG-HTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLST 208 (289)
T ss_pred CEEEEEcCCCcEEEEEccccccceeEec-CccccceEEECCCcCEEEEecCCCcEEEEECCC
Confidence 55555 99999999999999999987 578999999999999999999999999999875
No 31
>KOG0264|consensus
Probab=99.53 E-value=5.7e-14 Score=130.97 Aligned_cols=123 Identities=11% Similarity=0.243 Sum_probs=100.2
Q ss_pred EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC--CceeEEecCCCCCCeeEEEEcCCc---eeee-C
Q psy2083 17 IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA--DKPLRVKDHMYGLPIRDIKFHDNY---VLSM-D 90 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs--~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss-d 90 (248)
+.+ |++.|+.+.|.+-...+|++.+|+ +.+.|||+|+ .+|-.. ...|+.+|++|+|+|-. |+++ .
T Consensus 223 ~~~-h~~~VeDV~~h~~h~~lF~sv~dd-------~~L~iwD~R~~~~~~~~~-~~ah~~~vn~~~fnp~~~~ilAT~S~ 293 (422)
T KOG0264|consen 223 FSG-HEDVVEDVAWHPLHEDLFGSVGDD-------GKLMIWDTRSNTSKPSHS-VKAHSAEVNCVAFNPFNEFILATGSA 293 (422)
T ss_pred eec-CCcceehhhccccchhhheeecCC-------CeEEEEEcCCCCCCCccc-ccccCCceeEEEeCCCCCceEEeccC
Confidence 444 589999999999877788666665 4899999995 444333 23445999999999976 5554 5
Q ss_pred CCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCCCC
Q psy2083 91 SSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGPAP 149 (248)
Q Consensus 91 d~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~aP 149 (248)
|++|++||+++ .+++.++++ |...|..|.|+|+- ++|++++.|+++.+||+..+|..-
T Consensus 294 D~tV~LwDlRnL~~~lh~~e~-H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq 353 (422)
T KOG0264|consen 294 DKTVALWDLRNLNKPLHTFEG-HEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQ 353 (422)
T ss_pred CCcEEEeechhcccCceeccC-CCcceEEEEeCCCCCceeEecccCCcEEEEecccccccc
Confidence 99999999997 568999998 79999999999954 889999999999999998877664
No 32
>KOG0292|consensus
Probab=99.53 E-value=3.2e-14 Score=141.50 Aligned_cols=125 Identities=14% Similarity=0.304 Sum_probs=107.2
Q ss_pred hcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc--
Q psy2083 9 DKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY-- 85 (248)
Q Consensus 9 ~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~-- 85 (248)
+=|.++.-|+.| .+.|..++|+|..-..++||+|. +|++|...+.+++.+. +|. ..|+.+.||+..
T Consensus 39 RM~tli~rFdeH-dGpVRgv~FH~~qplFVSGGDDy--------kIkVWnYk~rrclftL~GHl--DYVRt~~FHheyPW 107 (1202)
T KOG0292|consen 39 RMGTLIDRFDEH-DGPVRGVDFHPTQPLFVSGGDDY--------KIKVWNYKTRRCLFTLLGHL--DYVRTVFFHHEYPW 107 (1202)
T ss_pred hhhhHHhhhhcc-CCccceeeecCCCCeEEecCCcc--------EEEEEecccceehhhhcccc--ceeEEeeccCCCce
Confidence 336667777777 69999999999655444555554 8999999999988774 665 899999999987
Q ss_pred ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 86 VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 86 l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
|+ +|||.+|+||+..++++++.+.+ |..-|-|..|+|...++++||-|.+|++|||..|
T Consensus 108 IlSASDDQTIrIWNwqsr~~iavltG-HnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGL 167 (1202)
T KOG0292|consen 108 ILSASDDQTIRIWNWQSRKCIAVLTG-HNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGL 167 (1202)
T ss_pred EEEccCCCeEEEEeccCCceEEEEec-CceEEEeeccCCccceEEEecccceEEEEeecch
Confidence 55 57999999999999999999999 7999999999999999999999999999999887
No 33
>KOG0289|consensus
Probab=99.49 E-value=4.4e-13 Score=125.14 Aligned_cols=126 Identities=17% Similarity=0.303 Sum_probs=99.9
Q ss_pred chhcCceeEEEecC-CCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGSLFTCIESG-DQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~-~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+..+|.+++..... ..-.+++++|+| +|++|..|..+ |.|++||+.++..+..+. +|..||+.|+|+.++
T Consensus 331 d~~~g~~lt~vs~~~s~v~~ts~~fHp-DgLifgtgt~d-------~~vkiwdlks~~~~a~Fp-ght~~vk~i~FsENG 401 (506)
T KOG0289|consen 331 DISSGSQLTVVSDETSDVEYTSAAFHP-DGLIFGTGTPD-------GVVKIWDLKSQTNVAKFP-GHTGPVKAISFSENG 401 (506)
T ss_pred EccCCcEEEEEeeccccceeEEeeEcC-CceEEeccCCC-------ceEEEEEcCCccccccCC-CCCCceeEEEeccCc
Confidence 45678888876542 123467777777 56777776664 589999999988665553 466999999999998
Q ss_pred ---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 86 ---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 86 ---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+.++||+.||+||++.-+++.+|......++++++|.+.|.+|.++++|-+|+++.
T Consensus 402 Y~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~ 460 (506)
T KOG0289|consen 402 YWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICK 460 (506)
T ss_pred eEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEe
Confidence 55679999999999999999999862245799999999999999998888887775
No 34
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.49 E-value=1.3e-12 Score=132.66 Aligned_cols=125 Identities=7% Similarity=0.107 Sum_probs=101.2
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC-
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN- 84 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d- 84 (248)
|..+++.+..+.+| .+.|++++|+|.++. +++++.|+ +|++||++++.++....+. ..|.++.|+++
T Consensus 561 d~~~~~~~~~~~~H-~~~V~~l~~~p~~~~~L~Sgs~Dg--------~v~iWd~~~~~~~~~~~~~--~~v~~v~~~~~~ 629 (793)
T PLN00181 561 DVARSQLVTEMKEH-EKRVWSIDYSSADPTLLASGSDDG--------SVKLWSINQGVSIGTIKTK--ANICCVQFPSES 629 (793)
T ss_pred ECCCCeEEEEecCC-CCCEEEEEEcCCCCCEEEEEcCCC--------EEEEEECCCCcEEEEEecC--CCeEEEEEeCCC
Confidence 55678888888776 789999999975554 55666554 9999999999887776543 58999999654
Q ss_pred c---eeeeCCCeEEEEECCCCC-EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 85 Y---VLSMDSSVVKIWSKDNGS-LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 85 ~---l~Ssdd~~IKIWD~~tGk-~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ ++++.|+.|++||.++++ ++.++.+ |...|++++|. +++.|++++.|++|++|+++.
T Consensus 630 g~~latgs~dg~I~iwD~~~~~~~~~~~~~-h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~ 691 (793)
T PLN00181 630 GRSLAFGSADHKVYYYDLRNPKLPLCTMIG-HSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSM 691 (793)
T ss_pred CCEEEEEeCCCeEEEEECCCCCccceEecC-CCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCC
Confidence 4 445689999999999876 5677777 68999999996 788999999999999999864
No 35
>KOG0285|consensus
Probab=99.49 E-value=9.9e-14 Score=127.11 Aligned_cols=121 Identities=17% Similarity=0.347 Sum_probs=104.5
Q ss_pred cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEE
Q psy2083 19 SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVK 95 (248)
Q Consensus 19 ~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IK 95 (248)
++|-+.|.++.-.|.-..++++|.|. ++|+||+|+..++.+.. +|..||.+|.+.|.. +.+|.|.+|+
T Consensus 232 hGHlS~V~~L~lhPTldvl~t~grDs--------t~RvWDiRtr~~V~~l~-GH~~~V~~V~~~~~dpqvit~S~D~tvr 302 (460)
T KOG0285|consen 232 HGHLSGVYCLDLHPTLDVLVTGGRDS--------TIRVWDIRTRASVHVLS-GHTNPVASVMCQPTDPQVITGSHDSTVR 302 (460)
T ss_pred ccccceeEEEeccccceeEEecCCcc--------eEEEeeecccceEEEec-CCCCcceeEEeecCCCceEEecCCceEE
Confidence 33478999999999877899999987 99999999999988763 344999999999754 5557899999
Q ss_pred EEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccc
Q psy2083 96 IWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDN 157 (248)
Q Consensus 96 IWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~ 157 (248)
+||...|+...++.. |...+.++|.+|.-.++++|+.| .|+.|.+|. -.||.|
T Consensus 303 lWDl~agkt~~tlt~-hkksvral~lhP~e~~fASas~d-nik~w~~p~-------g~f~~n 355 (460)
T KOG0285|consen 303 LWDLRAGKTMITLTH-HKKSVRALCLHPKENLFASASPD-NIKQWKLPE-------GEFLQN 355 (460)
T ss_pred EeeeccCceeEeeec-ccceeeEEecCCchhhhhccCCc-cceeccCCc-------cchhhc
Confidence 999999999999997 69999999999999999988865 589999997 578888
No 36
>KOG0289|consensus
Probab=99.49 E-value=3.6e-13 Score=125.73 Aligned_cols=120 Identities=13% Similarity=0.218 Sum_probs=104.4
Q ss_pred CCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC-CCCCCeeEEEEcCCc-ee--eeCCCeEEE
Q psy2083 21 DQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH-MYGLPIRDIKFHDNY-VL--SMDSSVVKI 96 (248)
Q Consensus 21 ~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h-~~~~pI~sI~F~~d~-l~--Ssdd~~IKI 96 (248)
|+..|+.+.-.|.+.++++++.|+ ++...|+++++.+.+..+ ..+-.+++.+||||+ |. ++.|++|||
T Consensus 302 h~~~V~~ls~h~tgeYllsAs~d~--------~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vki 373 (506)
T KOG0289|consen 302 HEEPVTGLSLHPTGEYLLSASNDG--------TWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKI 373 (506)
T ss_pred ccccceeeeeccCCcEEEEecCCc--------eEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEE
Confidence 367899999999888888887775 999999999998877654 345679999999999 44 357999999
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAP 149 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP 149 (248)
||..++..++.|.+ |.++|..+.|+.||-+|+++++|+.|++||+..+-.-|
T Consensus 374 wdlks~~~~a~Fpg-ht~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~k 425 (506)
T KOG0289|consen 374 WDLKSQTNVAKFPG-HTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFK 425 (506)
T ss_pred EEcCCccccccCCC-CCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccc
Confidence 99999999999998 79999999999999999999999999999998776544
No 37
>KOG0282|consensus
Probab=99.49 E-value=3.2e-14 Score=133.83 Aligned_cols=121 Identities=9% Similarity=0.146 Sum_probs=107.9
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---- 85 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---- 85 (248)
.|++++++.+| ...|-+++|++++..++++|-|. .|+|||+.+|+.+..+.-+ .++++|.|+|+.
T Consensus 247 ~~~~lrtf~gH-~k~Vrd~~~s~~g~~fLS~sfD~--------~lKlwDtETG~~~~~f~~~--~~~~cvkf~pd~~n~f 315 (503)
T KOG0282|consen 247 DRRCLRTFKGH-RKPVRDASFNNCGTSFLSASFDR--------FLKLWDTETGQVLSRFHLD--KVPTCVKFHPDNQNIF 315 (503)
T ss_pred Ccceehhhhcc-hhhhhhhhccccCCeeeeeecce--------eeeeeccccceEEEEEecC--CCceeeecCCCCCcEE
Confidence 58899998887 78999999999877777887775 9999999999988877544 789999999986
Q ss_pred eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
++++.|+.|+-||.++|+.++.+.- |-..|+++.|.|+|..++++++|+.|.+|..
T Consensus 316 l~G~sd~ki~~wDiRs~kvvqeYd~-hLg~i~~i~F~~~g~rFissSDdks~riWe~ 371 (503)
T KOG0282|consen 316 LVGGSDKKIRQWDIRSGKVVQEYDR-HLGAILDITFVDEGRRFISSSDDKSVRIWEN 371 (503)
T ss_pred EEecCCCcEEEEeccchHHHHHHHh-hhhheeeeEEccCCceEeeeccCccEEEEEc
Confidence 6677899999999999999998886 6899999999999999999999999999984
No 38
>KOG0278|consensus
Probab=99.48 E-value=6.3e-14 Score=123.57 Aligned_cols=129 Identities=16% Similarity=0.263 Sum_probs=105.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc-eeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK-PLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~-pl~~~~h~~~~pI~sI~F~~d 84 (248)
.|+.+|..+.+|++- .-|-.++|+.|+..|+++|.+. .+|+||+..++ |..... +|...|+.+.|...
T Consensus 86 w~a~tgdelhsf~hk--hivk~~af~~ds~~lltgg~ek--------llrvfdln~p~App~E~~-ghtg~Ir~v~wc~e 154 (334)
T KOG0278|consen 86 WDAVTGDELHSFEHK--HIVKAVAFSQDSNYLLTGGQEK--------LLRVFDLNRPKAPPKEIS-GHTGGIRTVLWCHE 154 (334)
T ss_pred hhhhhhhhhhhhhhh--heeeeEEecccchhhhccchHH--------HhhhhhccCCCCCchhhc-CCCCcceeEEEecc
Confidence 578899999999975 3666777777777788988887 79999999873 444332 33488999999765
Q ss_pred c--eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 85 Y--VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 85 ~--l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
. ++| +||++||+||.++|+.+++++. +++|+++.+++||.+|.++ ..+.|..|++-.+|+.
T Consensus 155 D~~iLSSadd~tVRLWD~rTgt~v~sL~~--~s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~l 218 (334)
T KOG0278|consen 155 DKCILSSADDKTVRLWDHRTGTEVQSLEF--NSPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLL 218 (334)
T ss_pred CceEEeeccCCceEEEEeccCcEEEEEec--CCCCcceeeccCCCEEEEe-cCceeEEeccccccce
Confidence 4 554 7999999999999999999998 8999999999999876554 5888999999888775
No 39
>KOG1446|consensus
Probab=99.48 E-value=9.6e-13 Score=118.51 Aligned_cols=134 Identities=14% Similarity=0.209 Sum_probs=101.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCcee----------EEecC-----
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPL----------RVKDH----- 70 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl----------~~~~h----- 70 (248)
|+..+.+.+++|.+| ...|++++.+|-+...++++-|+ +|+|||+|+.++. ..+|.
T Consensus 85 Lsl~dNkylRYF~GH-~~~V~sL~~sP~~d~FlS~S~D~--------tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLif 155 (311)
T KOG1446|consen 85 LSLHDNKYLRYFPGH-KKRVNSLSVSPKDDTFLSSSLDK--------TVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIF 155 (311)
T ss_pred EEeecCceEEEcCCC-CceEEEEEecCCCCeEEecccCC--------eEEeeEecCCCCceEEecCCCcceeECCCCcEE
Confidence 556678899999987 69999999999776566666665 9999999965432 21111
Q ss_pred -----------------------------CCCCCeeEEEEcCCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCe--
Q psy2083 71 -----------------------------MYGLPIRDIKFHDNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQF-- 116 (248)
Q Consensus 71 -----------------------------~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~I-- 116 (248)
.-...++.|+|+||+ ++|.+.+.+.+-|.-+|....+++. ++..-
T Consensus 156 A~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~-~~~~~~~ 234 (311)
T KOG1446|consen 156 ALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSG-YPNAGNL 234 (311)
T ss_pred EEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEee-ccCCCCc
Confidence 001357788899998 7788888899999999999998886 23322
Q ss_pred -eEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCC
Q psy2083 117 -NNLCHIPESGMMFIANENKKILTYYIPSLGPAP 149 (248)
Q Consensus 117 -n~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP 149 (248)
-+.+|.|||..+++|++|++|++|.+..--+.-
T Consensus 235 ~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~ 268 (311)
T KOG1446|consen 235 PLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVA 268 (311)
T ss_pred ceeEEECCCCcEEEEecCCCcEEEEEcCCCcEee
Confidence 489999999999999999999999985543333
No 40
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.47 E-value=1.7e-12 Score=131.68 Aligned_cols=126 Identities=17% Similarity=0.247 Sum_probs=98.6
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc-eeEEecCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK-PLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~-pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
|..+|..+.++..+ ..|.++.|.+++|..+++|+.+ |+|++||+|+++ |+... .+|..+|.+|.|.+..
T Consensus 604 d~~~~~~~~~~~~~--~~v~~v~~~~~~g~~latgs~d-------g~I~iwD~~~~~~~~~~~-~~h~~~V~~v~f~~~~ 673 (793)
T PLN00181 604 SINQGVSIGTIKTK--ANICCVQFPSESGRSLAFGSAD-------HKVYYYDLRNPKLPLCTM-IGHSKTVSYVRFVDSS 673 (793)
T ss_pred ECCCCcEEEEEecC--CCeEEEEEeCCCCCEEEEEeCC-------CeEEEEECCCCCccceEe-cCCCCCEEEEEEeCCC
Confidence 45567777777754 5788888877666655444443 499999999875 55443 2445899999998655
Q ss_pred --eeeeCCCeEEEEECCC------CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 86 --VLSMDSSVVKIWSKDN------GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 --l~Ssdd~~IKIWD~~t------Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++++.|++|+|||..+ ++++.++.+ |...+++++|+|++++|++|++|++|.+|+..
T Consensus 674 ~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~g-h~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~ 738 (793)
T PLN00181 674 TLVSSSTDNTLKLWDLSMSISGINETPLHSFMG-HTNVKNFVGLSVSDGYIATGSETNEVFVYHKA 738 (793)
T ss_pred EEEEEECCCEEEEEeCCCCccccCCcceEEEcC-CCCCeeEEEEcCCCCEEEEEeCCCEEEEEECC
Confidence 5556899999999974 367888888 68999999999999999999999999999854
No 41
>KOG0295|consensus
Probab=99.47 E-value=6.2e-13 Score=121.84 Aligned_cols=127 Identities=10% Similarity=0.203 Sum_probs=102.2
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCC-
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDN- 84 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d- 84 (248)
+-.+|-++.++.+| +..|..+....|+ .++++++.+. +|++|=+.++.+... .+|. .||.+|+|-|.
T Consensus 221 e~~tg~cv~t~~~h-~ewvr~v~v~~DG-ti~As~s~dq-------tl~vW~~~t~~~k~~lR~hE--h~vEci~wap~~ 289 (406)
T KOG0295|consen 221 ECDTGYCVKTFPGH-SEWVRMVRVNQDG-TIIASCSNDQ-------TLRVWVVATKQCKAELREHE--HPVECIAWAPES 289 (406)
T ss_pred ecccceeEEeccCc-hHhEEEEEecCCe-eEEEecCCCc-------eEEEEEeccchhhhhhhccc--cceEEEEecccc
Confidence 34578999999887 5677777666654 5555544443 999999999865544 4666 89999998763
Q ss_pred -------------c---ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 85 -------------Y---VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 85 -------------~---l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
+ +. .+-|++||+||..+|.++-++-+ |...|.+++|+|.|.+|+++.+|+++++|++..+
T Consensus 290 ~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~g-hdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~ 366 (406)
T KOG0295|consen 290 SYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVG-HDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNL 366 (406)
T ss_pred cCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEec-ccceeeeeEEcCCCeEEEEEecCCcEEEEEeccc
Confidence 1 23 35699999999999999999999 7999999999999999999999999999998764
No 42
>KOG0283|consensus
Probab=99.47 E-value=2.1e-13 Score=134.65 Aligned_cols=117 Identities=13% Similarity=0.197 Sum_probs=98.5
Q ss_pred EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-----------------------C-----------
Q psy2083 17 IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-----------------------D----------- 62 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-----------------------~----------- 62 (248)
+...|.+.|+++.|++||.+|++||.|+ .|+||-+.. .
T Consensus 262 ~~~ah~gaIw~mKFS~DGKyLAsaGeD~--------virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~ 333 (712)
T KOG0283|consen 262 ISNAHKGAIWAMKFSHDGKYLASAGEDG--------VIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKIS 333 (712)
T ss_pred cccccCCcEEEEEeCCCCceeeecCCCc--------eEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccc
Confidence 4435589999999999999999999986 899999877 0
Q ss_pred --------------------------ceeEEecCCCCCCeeEEEEcCCc-ee-eeCCCeEEEEECCCCCEEEEeecCCCC
Q psy2083 63 --------------------------KPLRVKDHMYGLPIRDIKFHDNY-VL-SMDSSVVKIWSKDNGSLFTCIESGDQT 114 (248)
Q Consensus 63 --------------------------~pl~~~~h~~~~pI~sI~F~~d~-l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~ 114 (248)
+|++.+ -+|...|.+|.|+.++ |+ ++.|++||+|++...+++.+|. |..
T Consensus 334 ~~~s~~~~~~~s~~~~~p~~~f~f~ekP~~ef-~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~--Hnd 410 (712)
T KOG0283|consen 334 SRTSSSRKGSQSPCVLLPLKAFVFSEKPFCEF-KGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFS--HND 410 (712)
T ss_pred ccccccccccCCccccCCCccccccccchhhh-hccchhheecccccCCeeEeccccccEEeecCCCcceeeEEe--cCC
Confidence 111111 1455889999999998 44 5689999999999999999998 489
Q ss_pred CeeEEEEeC-CCCEEEEEeCCCeEEEEEcCC
Q psy2083 115 QFNNLCHIP-ESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 115 ~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~ 144 (248)
=|+|++|+| |..++++|+-|+++++|.||.
T Consensus 411 fVTcVaFnPvDDryFiSGSLD~KvRiWsI~d 441 (712)
T KOG0283|consen 411 FVTCVAFNPVDDRYFISGSLDGKVRLWSISD 441 (712)
T ss_pred eeEEEEecccCCCcEeecccccceEEeecCc
Confidence 999999999 779999999999999999987
No 43
>KOG0285|consensus
Probab=99.47 E-value=4.1e-13 Score=123.10 Aligned_cols=128 Identities=11% Similarity=0.198 Sum_probs=112.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+|++..++.+| ...|..+++++..-++|++|.|+ +|+-|||...+-+..+ |+|=..|.++..||..
T Consensus 178 wDlatg~LkltltGh-i~~vr~vavS~rHpYlFs~gedk--------~VKCwDLe~nkvIR~Y-hGHlS~V~~L~lhPTl 247 (460)
T KOG0285|consen 178 WDLATGQLKLTLTGH-IETVRGVAVSKRHPYLFSAGEDK--------QVKCWDLEYNKVIRHY-HGHLSGVYCLDLHPTL 247 (460)
T ss_pred EEcccCeEEEeecch-hheeeeeeecccCceEEEecCCC--------eeEEEechhhhhHHHh-ccccceeEEEeccccc
Confidence 466789999999887 79999999999999999999996 8999999988765544 5555889999999986
Q ss_pred --eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 --VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|++ +.|.++||||.++...+.++.+ |..+|++|.+.|-.+.+++|+-|++|++||+..
T Consensus 248 dvl~t~grDst~RvWDiRtr~~V~~l~G-H~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~a 308 (460)
T KOG0285|consen 248 DVLVTGGRDSTIRVWDIRTRASVHVLSG-HTNPVASVMCQPTDPQVITGSHDSTVRLWDLRA 308 (460)
T ss_pred eeEEecCCcceEEEeeecccceEEEecC-CCCcceeEEeecCCCceEEecCCceEEEeeecc
Confidence 444 5799999999999999999998 799999999999888999999999999999754
No 44
>KOG0316|consensus
Probab=99.47 E-value=4.6e-13 Score=117.33 Aligned_cols=126 Identities=13% Similarity=0.160 Sum_probs=108.6
Q ss_pred ccccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC--ceeEEecCCCCCCeeEEE
Q psy2083 3 AQELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD--KPLRVKDHMYGLPIRDIK 80 (248)
Q Consensus 3 ~~~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~--~pl~~~~h~~~~pI~sI~ 80 (248)
.|-.|-.+|+.++-+.+| -+.||++.|..++..+++++-|. ++++||-|+. +|+++.+.. ...|.+|.
T Consensus 83 v~vwDV~TGkv~Rr~rgH-~aqVNtV~fNeesSVv~SgsfD~--------s~r~wDCRS~s~ePiQildea-~D~V~Si~ 152 (307)
T KOG0316|consen 83 VQVWDVNTGKVDRRFRGH-LAQVNTVRFNEESSVVASGSFDS--------SVRLWDCRSRSFEPIQILDEA-KDGVSSID 152 (307)
T ss_pred EEEEEcccCeeeeecccc-cceeeEEEecCcceEEEeccccc--------eeEEEEcccCCCCccchhhhh-cCceeEEE
Confidence 455678899999998887 69999999999888888888776 8999999986 789887643 36799999
Q ss_pred EcCCc-eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 81 FHDNY-VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 81 F~~d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
..... |.+|-|+++|.+|++.|+....+-+ .|||+++|+|||+..++++-|+++++-+
T Consensus 153 v~~heIvaGS~DGtvRtydiR~G~l~sDy~g---~pit~vs~s~d~nc~La~~l~stlrLlD 211 (307)
T KOG0316|consen 153 VAEHEIVAGSVDGTVRTYDIRKGTLSSDYFG---HPITSVSFSKDGNCSLASSLDSTLRLLD 211 (307)
T ss_pred ecccEEEeeccCCcEEEEEeecceeehhhcC---CcceeEEecCCCCEEEEeeccceeeecc
Confidence 99888 6667899999999999988776665 6999999999999999999999998855
No 45
>KOG0319|consensus
Probab=99.46 E-value=4.5e-13 Score=131.16 Aligned_cols=116 Identities=16% Similarity=0.216 Sum_probs=100.2
Q ss_pred cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-eeCCCeEE
Q psy2083 19 SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSSVVK 95 (248)
Q Consensus 19 ~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~IK 95 (248)
..|...||++...|++.+++++|-|. +++||++....-+.+. -+|...|.+|.|+|.. ++ +|.|++||
T Consensus 460 ~aHdKdIN~Vaia~ndkLiAT~SqDk--------taKiW~le~~~l~~vL-sGH~RGvw~V~Fs~~dq~laT~SgD~TvK 530 (775)
T KOG0319|consen 460 RAHDKDINCVAIAPNDKLIATGSQDK--------TAKIWDLEQLRLLGVL-SGHTRGVWCVSFSKNDQLLATCSGDKTVK 530 (775)
T ss_pred HhhcccccceEecCCCceEEeccccc--------ceeeecccCceEEEEe-eCCccceEEEEeccccceeEeccCCceEE
Confidence 34468999999999888777777776 9999999966666664 2445889999999985 44 46799999
Q ss_pred EEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 96 IWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 96 IWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
||.+.++.++.+|++ |...|.-+.|..+|..|++|+.||-|++|.|..
T Consensus 531 IW~is~fSClkT~eG-H~~aVlra~F~~~~~qliS~~adGliKlWnikt 578 (775)
T KOG0319|consen 531 IWSISTFSCLKTFEG-HTSAVLRASFIRNGKQLISAGADGLIKLWNIKT 578 (775)
T ss_pred EEEeccceeeeeecC-ccceeEeeeeeeCCcEEEeccCCCcEEEEeccc
Confidence 999999999999999 799999999999999999999999999999854
No 46
>KOG0316|consensus
Probab=99.46 E-value=9.4e-13 Score=115.38 Aligned_cols=123 Identities=11% Similarity=0.156 Sum_probs=106.3
Q ss_pred EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee-eCCC
Q psy2083 16 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS-MDSS 92 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S-sdd~ 92 (248)
.+..+ ++.|..+.|.-++.+.+++|+|. +||||+.-.+..+.++. +||..|..++.+.|. ++| +.|+
T Consensus 12 ~l~~~-qgaV~avryN~dGnY~ltcGsdr--------tvrLWNp~rg~liktYs-ghG~EVlD~~~s~Dnskf~s~GgDk 81 (307)
T KOG0316|consen 12 ILDCA-QGAVRAVRYNVDGNYCLTCGSDR--------TVRLWNPLRGALIKTYS-GHGHEVLDAALSSDNSKFASCGGDK 81 (307)
T ss_pred eeccc-ccceEEEEEccCCCEEEEcCCCc--------eEEeecccccceeeeec-CCCceeeeccccccccccccCCCCc
Confidence 34444 78999999998888888888887 99999999998888862 344789998887775 665 4799
Q ss_pred eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCC
Q psy2083 93 VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAP 149 (248)
Q Consensus 93 ~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP 149 (248)
.|.+||.+||+....+.+ |.+.||.+.|+.++..+++|+-|.+|++|+..+-.+.|
T Consensus 82 ~v~vwDV~TGkv~Rr~rg-H~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~eP 137 (307)
T KOG0316|consen 82 AVQVWDVNTGKVDRRFRG-HLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEP 137 (307)
T ss_pred eEEEEEcccCeeeeeccc-ccceeeEEEecCcceEEEeccccceeEEEEcccCCCCc
Confidence 999999999999999999 79999999999999999999999999999998876666
No 47
>KOG0319|consensus
Probab=99.44 E-value=9.5e-13 Score=128.95 Aligned_cols=123 Identities=11% Similarity=0.161 Sum_probs=110.3
Q ss_pred hhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--
Q psy2083 8 QDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-- 85 (248)
Q Consensus 8 ~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-- 85 (248)
...+....++.+| .-.|.++.|+|.++.++++++|. |||||-|.+..++.+++ +|...|..++|-.++
T Consensus 492 le~~~l~~vLsGH-~RGvw~V~Fs~~dq~laT~SgD~--------TvKIW~is~fSClkT~e-GH~~aVlra~F~~~~~q 561 (775)
T KOG0319|consen 492 LEQLRLLGVLSGH-TRGVWCVSFSKNDQLLATCSGDK--------TVKIWSISTFSCLKTFE-GHTSAVLRASFIRNGKQ 561 (775)
T ss_pred ccCceEEEEeeCC-ccceEEEEeccccceeEeccCCc--------eEEEEEeccceeeeeec-CccceeEeeeeeeCCcE
Confidence 3367788888887 89999999999999999999886 99999999999999985 445899999998876
Q ss_pred eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 86 VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 86 l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
++| +.||.||||++++++++.++.. |...|..+..+|++.++++|+.|+.|..|-
T Consensus 562 liS~~adGliKlWnikt~eC~~tlD~-H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 562 LISAGADGLIKLWNIKTNECEMTLDA-HNDRVWALSVSPLLDMFVTGGGDGRIIFWK 617 (775)
T ss_pred EEeccCCCcEEEEeccchhhhhhhhh-ccceeEEEeecCccceeEecCCCeEEEEee
Confidence 555 5799999999999999999999 799999999999999999999999999993
No 48
>KOG0276|consensus
Probab=99.43 E-value=1.7e-12 Score=125.60 Aligned_cols=162 Identities=12% Similarity=0.145 Sum_probs=126.6
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d 84 (248)
+|-.+++.+..|+.| ++.|.+++.+|..-.++++++|. +||+||-... ...+++ .+|...|.+|+|+|.
T Consensus 82 fnynt~ekV~~FeAH-~DyIR~iavHPt~P~vLtsSDDm--------~iKlW~we~~wa~~qtf-eGH~HyVMqv~fnPk 151 (794)
T KOG0276|consen 82 FNYNTGEKVKTFEAH-SDYIRSIAVHPTLPYVLTSSDDM--------TIKLWDWENEWACEQTF-EGHEHYVMQVAFNPK 151 (794)
T ss_pred EecccceeeEEeecc-ccceeeeeecCCCCeEEecCCcc--------EEEEeeccCceeeeeEE-cCcceEEEEEEecCC
Confidence 567789999999998 79999999999877777877776 9999999887 444555 355689999999997
Q ss_pred c----eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC--CEEEEEeCCCeEEEEEcCCCCCCCCccccccch
Q psy2083 85 Y----VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES--GMMFIANENKKILTYYIPSLGPAPKWCGFLDNL 158 (248)
Q Consensus 85 ~----l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds--gll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~ 158 (248)
. +.+|-|++||+|...+..+.-|+++ |...||++++.|.| .+|++|++|.+|++||... +=|
T Consensus 152 D~ntFaS~sLDrTVKVWslgs~~~nfTl~g-HekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQt-----k~C------ 219 (794)
T KOG0276|consen 152 DPNTFASASLDRTVKVWSLGSPHPNFTLEG-HEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQT-----KSC------ 219 (794)
T ss_pred CccceeeeeccccEEEEEcCCCCCceeeec-cccCcceEEeccCCCcceEEecCCCceEEEeecch-----HHH------
Confidence 4 5556899999999999899999998 79999999999865 6999999999999999753 123
Q ss_pred hhhhhccc--cccccC---CceeecHhHHhhcCCcc
Q psy2083 159 TEELEENI--IENVYD---DYKFVTRQELEDLGLGH 189 (248)
Q Consensus 159 tee~e~~~--~~~~yd---~y~fvt~~~l~~l~~~~ 189 (248)
++-||-|+ ...+|- =--++|-.|.-.+.|||
T Consensus 220 V~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWh 255 (794)
T KOG0276|consen 220 VQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWN 255 (794)
T ss_pred HHHhhcccccceEEEecCCCcEEEEecCCccEEEec
Confidence 45566542 122221 22356777777777766
No 49
>KOG0275|consensus
Probab=99.42 E-value=1.4e-13 Score=125.11 Aligned_cols=112 Identities=12% Similarity=0.155 Sum_probs=101.5
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-eeCCCeEEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSSVVKIWS 98 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD 98 (248)
.+.|-+++|+.|+.++++++-|+ .|++|-+++|.++..++..|...|+++.|+.|+ ++ ++.|.+|||--
T Consensus 263 d~aVlci~FSRDsEMlAsGsqDG--------kIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHG 334 (508)
T KOG0275|consen 263 DDAVLCISFSRDSEMLASGSQDG--------KIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHG 334 (508)
T ss_pred ccceEEEeecccHHHhhccCcCC--------cEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEec
Confidence 36899999999999888877774 899999999999998876667899999999997 55 46899999999
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
.++|+++..+.+ |++-||.+.|.+||..+++|+.|++|++|..
T Consensus 335 lKSGK~LKEfrG-HsSyvn~a~ft~dG~~iisaSsDgtvkvW~~ 377 (508)
T KOG0275|consen 335 LKSGKCLKEFRG-HSSYVNEATFTDDGHHIISASSDGTVKVWHG 377 (508)
T ss_pred cccchhHHHhcC-ccccccceEEcCCCCeEEEecCCccEEEecC
Confidence 999999999999 7999999999999999999999999999974
No 50
>KOG0296|consensus
Probab=99.42 E-value=1.3e-12 Score=119.67 Aligned_cols=129 Identities=14% Similarity=0.296 Sum_probs=103.7
Q ss_pred cchhcCceeEEEec-------CCCCCeeEEEEeCCCCc--EEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCe
Q psy2083 6 LRQDKGSLFTCIES-------GDQTQFNNLCHIPESGM--MFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPI 76 (248)
Q Consensus 6 ~~~~~G~~~~~~~~-------~~~~~V~~~~~~~~~g~--l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI 76 (248)
.+..+||.+-+..+ .+...+.++.|.|-+.. |+++|+- ||+|.|||+.+.++-.+..|. .+|
T Consensus 260 ~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~v-------dG~i~iyD~a~~~~R~~c~he--~~V 330 (399)
T KOG0296|consen 260 VNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSV-------DGTIAIYDLAASTLRHICEHE--DGV 330 (399)
T ss_pred EccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccc-------cceEEEEecccchhheeccCC--Cce
Confidence 35567776666542 23456677777765443 4555544 479999999998887777776 789
Q ss_pred eEEEEcCCc--eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 77 RDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 77 ~sI~F~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.++.|.++. ++++.+++|++||.++|+++.++.+ |..+|.+++++||..+++++++|++.++|.+|.
T Consensus 331 ~~l~w~~t~~l~t~c~~g~v~~wDaRtG~l~~~y~G-H~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~~ 399 (399)
T KOG0296|consen 331 TKLKWLNTDYLLTACANGKVRQWDARTGQLKFTYTG-HQMGILDFALSPQKRLVVTVSDDNTALVFEVPN 399 (399)
T ss_pred EEEEEcCcchheeeccCceEEeeeccccceEEEEec-CchheeEEEEcCCCcEEEEecCCCeEEEEecCC
Confidence 999999954 5567899999999999999999999 799999999999999999999999999999873
No 51
>KOG0645|consensus
Probab=99.42 E-value=7.8e-12 Score=111.20 Aligned_cols=121 Identities=14% Similarity=0.269 Sum_probs=99.1
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCceeE---EecCCCCCCeeEEEEcCCc--e
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADKPLR---VKDHMYGLPIRDIKFHDNY--V 86 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~pl~---~~~h~~~~pI~sI~F~~d~--l 86 (248)
.++++++| .+.|..++++|-.|.++ ++|.|. +||+|+..++..+. +.+.+|...|++|+|+|.+ |
T Consensus 6 ~~~~~~gh-~~r~W~~awhp~~g~ilAscg~Dk--------~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~L 76 (312)
T KOG0645|consen 6 LEQKLSGH-KDRVWSVAWHPGKGVILASCGTDK--------AVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYL 76 (312)
T ss_pred eEEeecCC-CCcEEEEEeccCCceEEEeecCCc--------eEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEE
Confidence 45566666 78899999999646644 555554 89999999754433 3455677999999999998 5
Q ss_pred ee-eCCCeEEEEECCCC--CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 87 LS-MDSSVVKIWSKDNG--SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 87 ~S-sdd~~IKIWD~~tG--k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++ |-|.++-||-...| +++.+||+ |..+|.+++|+++|++|++++.|+.|.+|-+-
T Consensus 77 a~aSFD~t~~Iw~k~~~efecv~~lEG-HEnEVK~Vaws~sG~~LATCSRDKSVWiWe~d 135 (312)
T KOG0645|consen 77 ASASFDATVVIWKKEDGEFECVATLEG-HENEVKCVAWSASGNYLATCSRDKSVWIWEID 135 (312)
T ss_pred EEeeccceEEEeecCCCceeEEeeeec-cccceeEEEEcCCCCEEEEeeCCCeEEEEEec
Confidence 55 46999999998865 68899999 79999999999999999999999999999876
No 52
>KOG0291|consensus
Probab=99.42 E-value=1.8e-12 Score=127.41 Aligned_cols=148 Identities=14% Similarity=0.243 Sum_probs=117.4
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce-eEEecCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP-LRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p-l~~~~h~~~~pI~sI~F~~d~ 85 (248)
..++|+++-.+.+| .++|.+++|+|.+..|++++-|. |||+||+-++.- +-+..+. ..+..++|+|++
T Consensus 464 S~qTGqllDiLsGH-EgPVs~l~f~~~~~~LaS~SWDk--------TVRiW~if~s~~~vEtl~i~--sdvl~vsfrPdG 532 (893)
T KOG0291|consen 464 SVQTGQLLDILSGH-EGPVSGLSFSPDGSLLASGSWDK--------TVRIWDIFSSSGTVETLEIR--SDVLAVSFRPDG 532 (893)
T ss_pred EeecCeeeehhcCC-CCcceeeEEccccCeEEeccccc--------eEEEEEeeccCceeeeEeec--cceeEEEEcCCC
Confidence 35689999999887 79999999999988888888786 999999987632 3334444 568999999998
Q ss_pred --ee-eeCCCeEEEEECCCCCEEEEeecC-------------------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 86 --VL-SMDSSVVKIWSKDNGSLFTCIESG-------------------DQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 --l~-Ssdd~~IKIWD~~tGk~~~tie~~-------------------h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
|+ +.-|+.|-|||.+.+..+.+|++. ....++.+|+++||++|++|++...|.+|++|
T Consensus 533 ~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~ 612 (893)
T KOG0291|consen 533 KELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVP 612 (893)
T ss_pred CeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECc
Confidence 54 457999999999999888887761 12468999999999999999999999999998
Q ss_pred CCCCCCCc----cccccchhhhhhcc
Q psy2083 144 SLGPAPKW----CGFLDNLTEELEEN 165 (248)
Q Consensus 144 ~lG~aP~w----cs~ld~~tee~e~~ 165 (248)
.=-..-|| ..-||++-|-|...
T Consensus 613 ~~vllkkfqiS~N~sLdg~~efln~r 638 (893)
T KOG0291|consen 613 EGVLLKKFQISDNRSLDGVLEFLNRR 638 (893)
T ss_pred hhheeeeEEeccccchhHHHHHhccc
Confidence 75444444 24577777666543
No 53
>KOG0318|consensus
Probab=99.41 E-value=4.7e-12 Score=120.53 Aligned_cols=117 Identities=15% Similarity=0.246 Sum_probs=99.2
Q ss_pred CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec--CCCCCCeeEEEEcCCc--ee-eeCCCeE
Q psy2083 20 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD--HMYGLPIRDIKFHDNY--VL-SMDSSVV 94 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~--h~~~~pI~sI~F~~d~--l~-Ssdd~~I 94 (248)
.|+..|+++.|+||+...+++|+|+ +|.|||=.++..+...+ -.|...|.+|+|+||+ ++ ++.|+++
T Consensus 188 ~HskFV~~VRysPDG~~Fat~gsDg--------ki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~ 259 (603)
T KOG0318|consen 188 EHSKFVNCVRYSPDGSRFATAGSDG--------KIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTI 259 (603)
T ss_pred ccccceeeEEECCCCCeEEEecCCc--------cEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceE
Confidence 3468999999999987788888885 89999999998777653 3455899999999997 44 5689999
Q ss_pred EEEECCCCCEEEEeec------------------------------------------CCCCCeeEEEEeCCCCEEEEEe
Q psy2083 95 KIWSKDNGSLFTCIES------------------------------------------GDQTQFNNLCHIPESGMMFIAN 132 (248)
Q Consensus 95 KIWD~~tGk~~~tie~------------------------------------------~h~~~In~l~~~pdsgll~sa~ 132 (248)
||||..+++++.++.. +|...|+++..+||+..|++|+
T Consensus 260 KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~Sgs 339 (603)
T KOG0318|consen 260 KIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGS 339 (603)
T ss_pred EEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeec
Confidence 9999999887666421 3788999999999999999999
Q ss_pred CCCeEEEEEcCC
Q psy2083 133 ENKKILTYYIPS 144 (248)
Q Consensus 133 ed~~I~~w~Ip~ 144 (248)
-|+.|.-|++..
T Consensus 340 yDG~I~~W~~~~ 351 (603)
T KOG0318|consen 340 YDGHINSWDSGS 351 (603)
T ss_pred cCceEEEEecCC
Confidence 999999999865
No 54
>KOG0265|consensus
Probab=99.41 E-value=2.1e-12 Score=116.04 Aligned_cols=120 Identities=11% Similarity=0.182 Sum_probs=98.3
Q ss_pred cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--ee-eeCCCeE
Q psy2083 19 SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSSVV 94 (248)
Q Consensus 19 ~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~I 94 (248)
.||.+.|+++.|.|++..++++|.|. .|.||.+-.. +..++. -+|...|..+.|.+|+ |+ ++.|++|
T Consensus 44 ~gh~geI~~~~F~P~gs~~aSgG~Dr--------~I~LWnv~gdceN~~~l-kgHsgAVM~l~~~~d~s~i~S~gtDk~v 114 (338)
T KOG0265|consen 44 PGHKGEIYTIKFHPDGSCFASGGSDR--------AIVLWNVYGDCENFWVL-KGHSGAVMELHGMRDGSHILSCGTDKTV 114 (338)
T ss_pred CCCcceEEEEEECCCCCeEeecCCcc--------eEEEEeccccccceeee-ccccceeEeeeeccCCCEEEEecCCceE
Confidence 34589999999999877787888886 8999997754 344442 1445999999999998 55 4689999
Q ss_pred EEEECCCCCEEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 95 KIWSKDNGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 95 KIWD~~tGk~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
+.||.++|+....+.+ |..-+|+++... +..|+.+|++|+++++||+..-+++
T Consensus 115 ~~wD~~tG~~~rk~k~-h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~ 168 (338)
T KOG0265|consen 115 RGWDAETGKRIRKHKG-HTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAI 168 (338)
T ss_pred EEEecccceeeehhcc-ccceeeecCccccCCeEEEecCCCceEEEEeecccchh
Confidence 9999999999999998 689999988544 4478889999999999999876665
No 55
>KOG0643|consensus
Probab=99.41 E-value=2.9e-12 Score=113.90 Aligned_cols=127 Identities=11% Similarity=0.152 Sum_probs=104.9
Q ss_pred hhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC---
Q psy2083 8 QDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN--- 84 (248)
Q Consensus 8 ~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d--- 84 (248)
...|.-+-+..+| ++.|+++...-++..+++++.|. +++|||+.+|+.+.....+ .||+.+.|+.+
T Consensus 39 s~nGerlGty~GH-tGavW~~Did~~s~~liTGSAD~--------t~kLWDv~tGk~la~~k~~--~~Vk~~~F~~~gn~ 107 (327)
T KOG0643|consen 39 SLNGERLGTYDGH-TGAVWCCDIDWDSKHLITGSADQ--------TAKLWDVETGKQLATWKTN--SPVKRVDFSFGGNL 107 (327)
T ss_pred ecCCceeeeecCC-CceEEEEEecCCcceeeeccccc--------eeEEEEcCCCcEEEEeecC--CeeEEEeeccCCcE
Confidence 3478888888887 89999999998899999999887 9999999999988776544 67777777651
Q ss_pred ---------------------------------------------------c--eeee-CCCeEEEEECCCCCE-EEEee
Q psy2083 85 ---------------------------------------------------Y--VLSM-DSSVVKIWSKDNGSL-FTCIE 109 (248)
Q Consensus 85 ---------------------------------------------------~--l~Ss-dd~~IKIWD~~tGk~-~~tie 109 (248)
+ |+++ +|+.|.+||+++|+. +.+.+
T Consensus 108 ~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~ 187 (327)
T KOG0643|consen 108 ILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDE 187 (327)
T ss_pred EEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechh
Confidence 1 4444 688999999999854 44555
Q ss_pred cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Q psy2083 110 SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLG 146 (248)
Q Consensus 110 ~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG 146 (248)
- |...||+++++||..++++|+.|.+-++||+..|-
T Consensus 188 ~-h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~ 223 (327)
T KOG0643|consen 188 E-HSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLE 223 (327)
T ss_pred h-hccccccccccCCcceEEecccCccceeeecccee
Confidence 5 68999999999999999999999999999987763
No 56
>KOG0647|consensus
Probab=99.40 E-value=2.5e-12 Score=115.67 Aligned_cols=114 Identities=12% Similarity=0.249 Sum_probs=92.7
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--eee-eCCCeEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIW 97 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIW 97 (248)
.+.|..+.|+|....++++|+-+ |+||+||+... .+.-.-.+.++.||.+++|+.|+ |.+ +-|+.+|+|
T Consensus 27 ~DsIS~l~FSP~~~~~~~A~SWD-------~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~w 99 (347)
T KOG0647|consen 27 EDSISALAFSPQADNLLAAGSWD-------GTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLW 99 (347)
T ss_pred ccchheeEeccccCceEEecccC-------CceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEE
Confidence 57899999999666677666654 59999999874 43333345566999999999998 555 569999999
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCC--EEEEEeCCCeEEEEEcCC
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESG--MMFIANENKKILTYYIPS 144 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsg--ll~sa~ed~~I~~w~Ip~ 144 (248)
|+.+|+ +..+.. |..+|..+.|.+... +|++|+-|++++.||..+
T Consensus 100 DL~S~Q-~~~v~~-Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~ 146 (347)
T KOG0647|consen 100 DLASGQ-VSQVAA-HDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRS 146 (347)
T ss_pred EccCCC-eeeeee-cccceeEEEEecCCCcceeEecccccceeecccCC
Confidence 999995 556677 699999999988766 999999999999999765
No 57
>KOG0277|consensus
Probab=99.39 E-value=4.3e-12 Score=112.17 Aligned_cols=171 Identities=13% Similarity=0.195 Sum_probs=129.9
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCC-ceeEE-ecCCCCCCeeEEEEcCCc----
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRAD-KPLRV-KDHMYGLPIRDIKFHDNY---- 85 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~-~~h~~~~pI~sI~F~~d~---- 85 (248)
.+..++.. +.+-++++++.... ++++++|+ +++|||+--+ +|+.. ++|. ..|.+|.+++..
T Consensus 53 e~~s~d~~--D~LfdV~Wse~~e~~~~~a~GDG--------SLrl~d~~~~s~Pi~~~kEH~--~EV~Svdwn~~~r~~~ 120 (311)
T KOG0277|consen 53 ECQSYDTE--DGLFDVAWSENHENQVIAASGDG--------SLRLFDLTMPSKPIHKFKEHK--REVYSVDWNTVRRRIF 120 (311)
T ss_pred EEEeeecc--cceeEeeecCCCcceEEEEecCc--------eEEEeccCCCCcchhHHHhhh--hheEEeccccccceeE
Confidence 44455553 68899999986655 55666664 9999997654 78876 4665 889999999763
Q ss_pred eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCCCC-----CCCCccccccchh
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPSLG-----PAPKWCGFLDNLT 159 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~lG-----~aP~wcs~ld~~t 159 (248)
++||-|++||+||..-++-++|+.+ |..-|-.+.|+| ..+++++++.|++.++|++..-| |||. +|-|+
T Consensus 121 ltsSWD~TiKLW~~~r~~Sv~Tf~g-h~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~----~Eil~ 195 (311)
T KOG0277|consen 121 LTSSWDGTIKLWDPNRPNSVQTFNG-HNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHN----SEILC 195 (311)
T ss_pred EeeccCCceEeecCCCCcceEeecC-CccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEecc----ceeEe
Confidence 7778899999999999999999998 699999999999 55899999999999999987643 2221 12222
Q ss_pred hhhhccccccccCCceeecHhHHhhcCCccc--cCCCcccccceeeeec
Q psy2083 160 EELEENIIENVYDDYKFVTRQELEDLGLGHL--IGTSLLRAYMHGFFMD 206 (248)
Q Consensus 160 ee~e~~~~~~~yd~y~fvt~~~l~~l~~~~l--igt~~l~~ymhgyf~~ 206 (248)
=.+ .-|+++..+|-.-...+..+.+ +-||+---|-|||-|.
T Consensus 196 cdw------~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVR 238 (311)
T KOG0277|consen 196 CDW------SKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVR 238 (311)
T ss_pred ecc------cccCCcEEEecCCCceEEEEehhhccccceeecCCceEEE
Confidence 211 2488888999877776766663 3377777799999874
No 58
>KOG0300|consensus
Probab=99.39 E-value=2.3e-12 Score=116.98 Aligned_cols=127 Identities=14% Similarity=0.274 Sum_probs=105.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|-.+|..+..+.+| ....+.++-.|...++++++.|. +.+|||+|..-+-....++|...|+++.|..+.
T Consensus 299 wDVEtge~v~~LtGH-d~ELtHcstHptQrLVvTsSrDt--------TFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd 369 (481)
T KOG0300|consen 299 WDVETGEVVNILTGH-DSELTHCSTHPTQRLVVTSSRDT--------TFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDD 369 (481)
T ss_pred eeeccCceeccccCc-chhccccccCCcceEEEEeccCc--------eeEeccchhhcceeeeecccccceeEEEEecCC
Confidence 456778888888887 57888888888666666777775 999999997655443345667999999999887
Q ss_pred --eeeeCCCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 86 --VLSMDSSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 --l~Ssdd~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+.++||++|||||+++ ..++.+|.. .+++|-++++..+.+|+..-+.++|++|++.
T Consensus 370 ~vVSgSDDrTvKvWdLrNMRsplATIRt--dS~~NRvavs~g~~iIAiPhDNRqvRlfDln 428 (481)
T KOG0300|consen 370 RVVSGSDDRTVKVWDLRNMRSPLATIRT--DSPANRVAVSKGHPIIAIPHDNRQVRLFDLN 428 (481)
T ss_pred ceeecCCCceEEEeeeccccCcceeeec--CCccceeEeecCCceEEeccCCceEEEEecC
Confidence 5557999999999987 679999998 8999999999999999999999999999964
No 59
>KOG0273|consensus
Probab=99.38 E-value=4.7e-12 Score=119.17 Aligned_cols=119 Identities=16% Similarity=0.273 Sum_probs=97.3
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCC---------cEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEE
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESG---------MMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIK 80 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g---------~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~ 80 (248)
+.+...+..| +..|.++.++|.+. ++++++.| ++|++||+.++.|+.++ .|+ .||.+|+
T Consensus 391 ~~~~~~l~~H-skei~t~~wsp~g~v~~n~~~~~~l~sas~d--------stV~lwdv~~gv~i~~f~kH~--~pVysva 459 (524)
T KOG0273|consen 391 SNSVHDLQAH-SKEIYTIKWSPTGPVTSNPNMNLMLASASFD--------STVKLWDVESGVPIHTLMKHQ--EPVYSVA 459 (524)
T ss_pred Ccchhhhhhh-ccceeeEeecCCCCccCCCcCCceEEEeecC--------CeEEEEEccCCceeEeeccCC--CceEEEE
Confidence 3344445555 67888888888543 24444444 59999999999999997 565 9999999
Q ss_pred EcCCc--eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 81 FHDNY--VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 81 F~~d~--l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
|+|++ ++++ -|+.|.||+..+|+.++++.+ ...|+.|||+.+|..|.++-.|+.+.+-++
T Consensus 460 fS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~--~~~Ifel~Wn~~G~kl~~~~sd~~vcvldl 522 (524)
T KOG0273|consen 460 FSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQG--TGGIFELCWNAAGDKLGACASDGSVCVLDL 522 (524)
T ss_pred ecCCCcEEEecCCCCeeEeccccchheeEeecC--CCeEEEEEEcCCCCEEEEEecCCCceEEEe
Confidence 99998 6665 599999999999999999998 788999999999999998888998887665
No 60
>KOG0294|consensus
Probab=99.38 E-value=4.1e-12 Score=114.91 Aligned_cols=115 Identities=16% Similarity=0.290 Sum_probs=98.5
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc-----ee
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY-----VL 87 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~-----l~ 87 (248)
+-.++.| .+.+++++.+ +-+++++|+|. +|+|||+++.+.+... .|. +.|+++.|.+.. |+
T Consensus 36 lF~~~aH-~~sitavAVs--~~~~aSGssDe--------tI~IYDm~k~~qlg~ll~Ha--gsitaL~F~~~~S~shLlS 102 (362)
T KOG0294|consen 36 LFAFSAH-AGSITALAVS--GPYVASGSSDE--------TIHIYDMRKRKQLGILLSHA--GSITALKFYPPLSKSHLLS 102 (362)
T ss_pred ccccccc-ccceeEEEec--ceeEeccCCCC--------cEEEEeccchhhhcceeccc--cceEEEEecCCcchhheee
Confidence 3344555 7889998887 45788888887 9999999999887764 554 899999999874 55
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+++|+.|-|||....+++.++.+ |...||+++++|.|.+-++.+.|..+.+|.+
T Consensus 103 ~sdDG~i~iw~~~~W~~~~slK~-H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNL 156 (362)
T KOG0294|consen 103 GSDDGHIIIWRVGSWELLKSLKA-HKGQVTDLSIHPSGKLALSVGGDQVLRTWNL 156 (362)
T ss_pred ecCCCcEEEEEcCCeEEeeeecc-cccccceeEecCCCceEEEEcCCceeeeehh
Confidence 57999999999999999999999 6889999999999999999999999999975
No 61
>KOG0295|consensus
Probab=99.37 E-value=4.2e-12 Score=116.43 Aligned_cols=117 Identities=13% Similarity=0.172 Sum_probs=93.1
Q ss_pred CCCeeEEEEeCCCCc--EE-EeecC----ceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc--eee-eC
Q psy2083 22 QTQFNNLCHIPESGM--MF-IANEN----KKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY--VLS-MD 90 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~--l~-~ag~d----~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~--l~S-sd 90 (248)
+-.|-.+.+.|...+ +. +++++ --.+++-|++||+||+.+++.+.+. +|. ..|..++|+|.+ |+| +|
T Consensus 277 Eh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghd--nwVr~~af~p~Gkyi~ScaD 354 (406)
T KOG0295|consen 277 EHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHD--NWVRGVAFSPGGKYILSCAD 354 (406)
T ss_pred ccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEeccc--ceeeeeEEcCCCeEEEEEec
Confidence 456666666664332 11 12211 1125556679999999999998875 555 899999999998 555 69
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
|+++++||.+++++..++++ |+.=++++.|..+..++++|+-|.++++|.
T Consensus 355 Dktlrvwdl~~~~cmk~~~a-h~hfvt~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 355 DKTLRVWDLKNLQCMKTLEA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred CCcEEEEEeccceeeeccCC-CcceeEEEecCCCCceEEeccccceeeeee
Confidence 99999999999999999999 699999999999999999999999999996
No 62
>KOG0640|consensus
Probab=99.37 E-value=2.5e-12 Score=116.34 Aligned_cols=118 Identities=13% Similarity=0.282 Sum_probs=98.8
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC---ceeEEecCCCCCCeeEEEEcCCc---e
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD---KPLRVKDHMYGLPIRDIKFHDNY---V 86 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~---~pl~~~~h~~~~pI~sI~F~~d~---l 86 (248)
.|+++-.| .+.|+.+.|.|....|++++.|+ +|+|||+... +...++.. ..||.+|+|||.+ +
T Consensus 164 vIRTlYDH-~devn~l~FHPre~ILiS~srD~--------tvKlFDfsK~saKrA~K~~qd--~~~vrsiSfHPsGefll 232 (430)
T KOG0640|consen 164 VIRTLYDH-VDEVNDLDFHPRETILISGSRDN--------TVKLFDFSKTSAKRAFKVFQD--TEPVRSISFHPSGEFLL 232 (430)
T ss_pred eEeehhhc-cCcccceeecchhheEEeccCCC--------eEEEEecccHHHHHHHHHhhc--cceeeeEeecCCCceEE
Confidence 67776665 78999999999888788877775 9999999764 22333322 3799999999998 5
Q ss_pred eeeCCCeEEEEECCCCCEEEEeec--CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 87 LSMDSSVVKIWSKDNGSLFTCIES--GDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~tGk~~~tie~--~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
++.+..++++||++|-+++.+-.| +|...|++|..++.|.+-++|+.||.|++|+
T Consensus 233 vgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwD 289 (430)
T KOG0640|consen 233 VGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWD 289 (430)
T ss_pred EecCCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeec
Confidence 567888999999999999887765 3678999999999999999999999999998
No 63
>KOG0274|consensus
Probab=99.36 E-value=1e-11 Score=121.53 Aligned_cols=125 Identities=10% Similarity=0.188 Sum_probs=99.4
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~- 85 (248)
|..+|+|..++.+| ++.| .+...- .-.+.+++.|. +|++||+.+++.+.+.. +|..+|++|..+.+.
T Consensus 277 d~~sg~C~~~l~gh-~stv-~~~~~~-~~~~~sgs~D~--------tVkVW~v~n~~~l~l~~-~h~~~V~~v~~~~~~l 344 (537)
T KOG0274|consen 277 DCSTGECTHSLQGH-TSSV-RCLTID-PFLLVSGSRDN--------TVKVWDVTNGACLNLLR-GHTGPVNCVQLDEPLL 344 (537)
T ss_pred ecCCCcEEEEecCC-CceE-EEEEcc-CceEeeccCCc--------eEEEEeccCcceEEEec-cccccEEEEEecCCEE
Confidence 46789999999987 4443 333222 22344445554 99999999998888875 245999999999666
Q ss_pred eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
++++.|++|++||+.++++++++.+ |...|.++.+.+. ..+++|+.|+.|++|++..+
T Consensus 345 vsgs~d~~v~VW~~~~~~cl~sl~g-H~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~ 402 (537)
T KOG0274|consen 345 VSGSYDGTVKVWDPRTGKCLKSLSG-HTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTK 402 (537)
T ss_pred EEEecCceEEEEEhhhceeeeeecC-CcceEEEEEecCc-ceEEeeeeccceEeecCCch
Confidence 6667899999999999999999999 7999999876554 89999999999999998765
No 64
>KOG0645|consensus
Probab=99.36 E-value=2.3e-11 Score=108.21 Aligned_cols=119 Identities=8% Similarity=0.215 Sum_probs=100.4
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCcee---EEecCCCCCCeeEEEEcCCc--e
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPL---RVKDHMYGLPIRDIKFHDNY--V 86 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl---~~~~h~~~~pI~sI~F~~d~--l 86 (248)
++++++++| ...|-+++|++++.+|++++.|. .|=+|.+.....+ .+. +.|...|+-|.|||.. |
T Consensus 96 ecv~~lEGH-EnEVK~Vaws~sG~~LATCSRDK--------SVWiWe~deddEfec~aVL-~~HtqDVK~V~WHPt~dlL 165 (312)
T KOG0645|consen 96 ECVATLEGH-ENEVKCVAWSASGNYLATCSRDK--------SVWIWEIDEDDEFECIAVL-QEHTQDVKHVIWHPTEDLL 165 (312)
T ss_pred eEEeeeecc-ccceeEEEEcCCCCEEEEeeCCC--------eEEEEEecCCCcEEEEeee-ccccccccEEEEcCCccee
Confidence 588889998 68999999999888899999987 8999999976433 332 3444789999999975 5
Q ss_pred ee-eCCCeEEEEECCC---CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 87 LS-MDSSVVKIWSKDN---GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 87 ~S-sdd~~IKIWD~~t---Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+| |-|++||+|+... -.++++|++ |...|.++.|.|+|..|+++++|+++++|-
T Consensus 166 ~S~SYDnTIk~~~~~~dddW~c~~tl~g-~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~ 223 (312)
T KOG0645|consen 166 FSCSYDNTIKVYRDEDDDDWECVQTLDG-HENTVWSLAFDNIGSRLVSCSDDGTVSIWR 223 (312)
T ss_pred EEeccCCeEEEEeecCCCCeeEEEEecC-ccceEEEEEecCCCceEEEecCCcceEeee
Confidence 55 5799999999873 358899998 688999999999999999999999999996
No 65
>KOG0281|consensus
Probab=99.36 E-value=9.5e-13 Score=120.52 Aligned_cols=165 Identities=13% Similarity=0.249 Sum_probs=125.5
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE--ecCCCCCCeeEEEEcCC
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV--KDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~--~~h~~~~pI~sI~F~~d 84 (248)
|-.+|+++.++-+| -.+|-.+.|+ +|++++++-|. ++++||+-++..+.. .--+|...||.|.|+..
T Consensus 263 Dv~tge~l~tlihH-ceaVLhlrf~--ng~mvtcSkDr--------siaVWdm~sps~it~rrVLvGHrAaVNvVdfd~k 331 (499)
T KOG0281|consen 263 DVNTGEPLNTLIHH-CEAVLHLRFS--NGYMVTCSKDR--------SIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK 331 (499)
T ss_pred eccCCchhhHHhhh-cceeEEEEEe--CCEEEEecCCc--------eeEEEeccCchHHHHHHHHhhhhhheeeeccccc
Confidence 44578888886665 6788888887 47888887776 899999998754321 12344599999999988
Q ss_pred cee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhh
Q psy2083 85 YVL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELE 163 (248)
Q Consensus 85 ~l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e 163 (248)
.|+ +|.|++||+|+..|++++.++.+ |.-.|- |.-.+|.++++|+.|.+|++|+|. |.-+=.+.|.-|
T Consensus 332 yIVsASgDRTikvW~~st~efvRtl~g-HkRGIA--ClQYr~rlvVSGSSDntIRlwdi~--------~G~cLRvLeGHE 400 (499)
T KOG0281|consen 332 YIVSASGDRTIKVWSTSTCEFVRTLNG-HKRGIA--CLQYRDRLVVSGSSDNTIRLWDIE--------CGACLRVLEGHE 400 (499)
T ss_pred eEEEecCCceEEEEeccceeeehhhhc-ccccce--ehhccCeEEEecCCCceEEEEecc--------ccHHHHHHhchH
Confidence 744 56899999999999999999999 688897 455689999999999999999986 455666666666
Q ss_pred ccccccccCCceeecHhHHhhcCCccccCC
Q psy2083 164 ENIIENVYDDYKFVTRQELEDLGLGHLIGT 193 (248)
Q Consensus 164 ~~~~~~~yd~y~fvt~~~l~~l~~~~ligt 193 (248)
|--..--||+=|-|+-.=.-++.+|+|.-.
T Consensus 401 eLvRciRFd~krIVSGaYDGkikvWdl~aa 430 (499)
T KOG0281|consen 401 ELVRCIRFDNKRIVSGAYDGKIKVWDLQAA 430 (499)
T ss_pred HhhhheeecCceeeeccccceEEEEecccc
Confidence 543344477777777666666666666554
No 66
>KOG0274|consensus
Probab=99.36 E-value=1.8e-11 Score=119.70 Aligned_cols=125 Identities=10% Similarity=0.116 Sum_probs=104.2
Q ss_pred cchhcCceeEE-EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTC-IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~-~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
.+...|..+.+ +.+| .+.|.++++..-+..+++++.|. ++++||+.++....+.. +|...|.++...+.
T Consensus 233 ~~~~~~~~i~~~l~GH-~g~V~~l~~~~~~~~lvsgS~D~--------t~rvWd~~sg~C~~~l~-gh~stv~~~~~~~~ 302 (537)
T KOG0274|consen 233 WDLNNGYLILTRLVGH-FGGVWGLAFPSGGDKLVSGSTDK--------TERVWDCSTGECTHSLQ-GHTSSVRCLTIDPF 302 (537)
T ss_pred eecccceEEEeeccCC-CCCceeEEEecCCCEEEEEecCC--------cEEeEecCCCcEEEEec-CCCceEEEEEccCc
Confidence 45566777777 7776 89999998877555677777775 99999999999988863 44478888888776
Q ss_pred cee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 85 YVL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 85 ~l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
.++ ++-|.+||+||..+|..+.++.+ |..+|+++... ++++++|+.|++|++|++.
T Consensus 303 ~~~sgs~D~tVkVW~v~n~~~l~l~~~-h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~ 359 (537)
T KOG0274|consen 303 LLVSGSRDNTVKVWDVTNGACLNLLRG-HTGPVNCVQLD--EPLLVSGSYDGTVKVWDPR 359 (537)
T ss_pred eEeeccCCceEEEEeccCcceEEEecc-ccccEEEEEec--CCEEEEEecCceEEEEEhh
Confidence 644 46899999999999999999998 79999988876 8999999999999999976
No 67
>KOG0772|consensus
Probab=99.35 E-value=2.5e-12 Score=122.31 Aligned_cols=162 Identities=15% Similarity=0.172 Sum_probs=121.9
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCcee-------------EEecCCCCCCeeEEE
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPL-------------RVKDHMYGLPIRDIK 80 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl-------------~~~~h~~~~pI~sI~ 80 (248)
++.++..+...|+++.|++.+++++++++.. ..+|+|=.....+ .+++| -..+++.+
T Consensus 206 fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~a--------qakl~DRdG~~~~e~~KGDQYI~Dm~nTKGH--ia~lt~g~ 275 (641)
T KOG0772|consen 206 FRQLQPCETHQINSLQYSVTGDQILVVSGSA--------QAKLLDRDGFEIVEFSKGDQYIRDMYNTKGH--IAELTCGC 275 (641)
T ss_pred hhccCcccccccceeeecCCCCeEEEEecCc--------ceeEEccCCceeeeeeccchhhhhhhccCCc--eeeeeccc
Confidence 4445544455899999999888877777765 7899994432211 13334 37899999
Q ss_pred EcCCc----eeeeCCCeEEEEECCCCC-EEEEeec----CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCc
Q psy2083 81 FHDNY----VLSMDSSVVKIWSKDNGS-LFTCIES----GDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKW 151 (248)
Q Consensus 81 F~~d~----l~Ssdd~~IKIWD~~tGk-~~~tie~----~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~w 151 (248)
|||.. +.+++|+++||||.++-+ .+..|.+ +-..++++++|+|||.+|++|+.||.|++|+.+..+.-|..
T Consensus 276 whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~ 355 (641)
T KOG0772|consen 276 WHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVM 355 (641)
T ss_pred cccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccce
Confidence 99986 777899999999998754 3333432 12468899999999999999999999999999999988877
Q ss_pred cc---ccc--chhhhhhccccccccCCceeecHhHHhhcCCcccc
Q psy2083 152 CG---FLD--NLTEELEENIIENVYDDYKFVTRQELEDLGLGHLI 191 (248)
Q Consensus 152 cs---~ld--~~tee~e~~~~~~~yd~y~fvt~~~l~~l~~~~li 191 (248)
|= ++. .||- ..+-||+-..+|+.....|.+|.|-
T Consensus 356 ~vk~AH~~g~~Its------i~FS~dg~~LlSRg~D~tLKvWDLr 394 (641)
T KOG0772|consen 356 KVKDAHLPGQDITS------ISFSYDGNYLLSRGFDDTLKVWDLR 394 (641)
T ss_pred EeeeccCCCCceeE------EEeccccchhhhccCCCceeeeecc
Confidence 71 222 2222 4566999999999999999998764
No 68
>KOG0641|consensus
Probab=99.35 E-value=2.5e-11 Score=106.18 Aligned_cols=159 Identities=16% Similarity=0.241 Sum_probs=119.1
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec---CCCC---CCeeEEEEcC
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD---HMYG---LPIRDIKFHD 83 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~---h~~~---~pI~sI~F~~ 83 (248)
+|.-+.-+.+| .+.|-.+-.+ +|.+|++|+.++ +|+.||+|-+..+.+.+ |+-+ ..|.+|+..|
T Consensus 172 ~g~~~~a~sgh-tghilalysw--n~~m~~sgsqdk-------tirfwdlrv~~~v~~l~~~~~~~glessavaav~vdp 241 (350)
T KOG0641|consen 172 RGQGFHALSGH-TGHILALYSW--NGAMFASGSQDK-------TIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDP 241 (350)
T ss_pred CCCcceeecCC-cccEEEEEEe--cCcEEEccCCCc-------eEEEEeeeccceeeeccCcccCCCcccceeEEEEECC
Confidence 34444555554 6777776555 456666666654 99999999987777653 3333 5799999999
Q ss_pred Cc--eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhh
Q psy2083 84 NY--VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTE 160 (248)
Q Consensus 84 d~--l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~te 160 (248)
.+ ++++ .|....++|++-|+.++.+.| |.++|++|.|+|.-.++++++-|.+|++-++.- .|+.
T Consensus 242 sgrll~sg~~dssc~lydirg~r~iq~f~p-hsadir~vrfsp~a~yllt~syd~~ikltdlqg------------dla~ 308 (350)
T KOG0641|consen 242 SGRLLASGHADSSCMLYDIRGGRMIQRFHP-HSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQG------------DLAH 308 (350)
T ss_pred CcceeeeccCCCceEEEEeeCCceeeeeCC-CccceeEEEeCCCceEEEEecccceEEEeeccc------------chhh
Confidence 98 5555 588888999999999999999 699999999999999999999999999987642 3444
Q ss_pred hhh-----cccc--cc---ccCCceeecHhHHhhcCCcccc
Q psy2083 161 ELE-----ENII--EN---VYDDYKFVTRQELEDLGLGHLI 191 (248)
Q Consensus 161 e~e-----~~~~--~~---~yd~y~fvt~~~l~~l~~~~li 191 (248)
||. |++. .+ --.|+-|++.+..+..-||.|-
T Consensus 309 el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 309 ELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred cCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 443 2211 11 1468999999888888777654
No 69
>KOG0313|consensus
Probab=99.34 E-value=1.2e-11 Score=113.91 Aligned_cols=122 Identities=6% Similarity=0.150 Sum_probs=100.8
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL 87 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~ 87 (248)
++..+.++++| ...|..+.|.+ .+.+++++-|. +|+.||+.+++........ .++++|..+|.. |+
T Consensus 249 ~r~P~vtl~GH-t~~Vs~V~w~d-~~v~yS~SwDH--------TIk~WDletg~~~~~~~~~--ksl~~i~~~~~~~Ll~ 316 (423)
T KOG0313|consen 249 TRTPLVTLEGH-TEPVSSVVWSD-ATVIYSVSWDH--------TIKVWDLETGGLKSTLTTN--KSLNCISYSPLSKLLA 316 (423)
T ss_pred ccCceEEeccc-ccceeeEEEcC-CCceEeecccc--------eEEEEEeecccceeeeecC--cceeEeecccccceee
Confidence 35588888887 78887777776 77788988886 9999999999877766544 789999999976 44
Q ss_pred -eeCCCeEEEEECCCCC---EEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCC
Q psy2083 88 -SMDSSVVKIWSKDNGS---LFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 88 -Ssdd~~IKIWD~~tGk---~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~ 144 (248)
++.|+.|++||+++|. ...++-+ |...|.++.++|.. -+|++|+-|+++++||+.+
T Consensus 317 ~gssdr~irl~DPR~~~gs~v~~s~~g-H~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS 377 (423)
T KOG0313|consen 317 SGSSDRHIRLWDPRTGDGSVVSQSLIG-HKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRS 377 (423)
T ss_pred ecCCCCceeecCCCCCCCceeEEeeec-chhhhhheecCCCCceEEEEEecCCeEEEEEecc
Confidence 4589999999999864 3456777 79999999999955 7788999999999999976
No 70
>KOG0283|consensus
Probab=99.33 E-value=5.3e-12 Score=124.83 Aligned_cols=119 Identities=14% Similarity=0.185 Sum_probs=103.1
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLS 88 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~S 88 (248)
.+..+-+| .+.|-++.++. ++.|++++-|. |||||++-+..+|.++.|. ..|+||+|+|-. |.+
T Consensus 361 P~~ef~GH-t~DILDlSWSK-n~fLLSSSMDK--------TVRLWh~~~~~CL~~F~Hn--dfVTcVaFnPvDDryFiSG 428 (712)
T KOG0283|consen 361 PFCEFKGH-TADILDLSWSK-NNFLLSSSMDK--------TVRLWHPGRKECLKVFSHN--DFVTCVAFNPVDDRYFISG 428 (712)
T ss_pred chhhhhcc-chhheeccccc-CCeeEeccccc--------cEEeecCCCcceeeEEecC--CeeEEEEecccCCCcEeec
Confidence 44455565 89999999887 77899999997 9999999999999999887 899999999964 666
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
|-|+.||||++-..+.+.-.+- ..-|+.+||.|||+..++|+-+|...+|.+..|
T Consensus 429 SLD~KvRiWsI~d~~Vv~W~Dl--~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~l 483 (712)
T KOG0283|consen 429 SLDGKVRLWSISDKKVVDWNDL--RDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGL 483 (712)
T ss_pred ccccceEEeecCcCeeEeehhh--hhhheeEEeccCCceEEEEEeccEEEEEEccCC
Confidence 7899999999998777766666 578999999999999999999999999987654
No 71
>KOG0264|consensus
Probab=99.33 E-value=1.5e-11 Score=114.88 Aligned_cols=123 Identities=12% Similarity=0.234 Sum_probs=93.6
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc---eee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY---VLS 88 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~---l~S 88 (248)
+-.+..+| .+.|+++.|.|-++.++++|+.+ ++|+|||+|.- +|+.+.. +|...|.+|.|+|+. ++|
T Consensus 264 ~~~~~~ah-~~~vn~~~fnp~~~~ilAT~S~D-------~tV~LwDlRnL~~~lh~~e-~H~dev~~V~WSPh~etvLAS 334 (422)
T KOG0264|consen 264 PSHSVKAH-SAEVNCVAFNPFNEFILATGSAD-------KTVALWDLRNLNKPLHTFE-GHEDEVFQVEWSPHNETVLAS 334 (422)
T ss_pred Cccccccc-CCceeEEEeCCCCCceEEeccCC-------CcEEEeechhcccCceecc-CCCcceEEEEeCCCCCceeEe
Confidence 34444554 79999999999999877665543 39999999984 6676653 344899999999986 444
Q ss_pred -eCCCeEEEEECCC-CCEEE------------EeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCC
Q psy2083 89 -MDSSVVKIWSKDN-GSLFT------------CIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 89 -sdd~~IKIWD~~t-Gk~~~------------tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~ 144 (248)
+.|+.+.+||+.. |+... -+.++|.+.|+++.|+|+- -+|+++++|+.+++|..+.
T Consensus 335 Sg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 335 SGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred cccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence 4799999999875 22211 2334689999999999977 5688899999999998653
No 72
>KOG0277|consensus
Probab=99.32 E-value=1e-11 Score=109.72 Aligned_cols=139 Identities=11% Similarity=0.167 Sum_probs=109.9
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
++..+.-++||.+| .+-|..++|+|-.+.+|++.+.+ |+++|||+|.+ +++.+..|. ..|.++.|+.-.
T Consensus 133 ~~~r~~Sv~Tf~gh-~~~Iy~a~~sp~~~nlfas~Sgd-------~~l~lwdvr~~gk~~~i~ah~--~Eil~cdw~ky~ 202 (311)
T KOG0277|consen 133 DPNRPNSVQTFNGH-NSCIYQAAFSPHIPNLFASASGD-------GTLRLWDVRSPGKFMSIEAHN--SEILCCDWSKYN 202 (311)
T ss_pred cCCCCcceEeecCC-ccEEEEEecCCCCCCeEEEccCC-------ceEEEEEecCCCceeEEEecc--ceeEeecccccC
Confidence 45566778888776 79999999999888877554443 49999999985 777777777 889999998653
Q ss_pred ---eee-eCCCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCCCCCccccccchh
Q psy2083 86 ---VLS-MDSSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGPAPKWCGFLDNLT 159 (248)
Q Consensus 86 ---l~S-sdd~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~t 159 (248)
+++ +.|+.||+||+++ ..++..+.+ |.-.|+.+.|+|.. .+|++|+-|-++++|+.. -=|++.
T Consensus 203 ~~vl~Tg~vd~~vr~wDir~~r~pl~eL~g-h~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~----------~~ds~~ 271 (311)
T KOG0277|consen 203 HNVLATGGVDNLVRGWDIRNLRTPLFELNG-HGLAVRKVKFSPHHASLLASASYDMTVRIWDPE----------RQDSAI 271 (311)
T ss_pred CcEEEecCCCceEEEEehhhccccceeecC-CceEEEEEecCcchhhHhhhccccceEEecccc----------cchhhh
Confidence 554 5799999999997 557778877 69999999999965 899999999999999742 235666
Q ss_pred hhhhccc
Q psy2083 160 EELEENI 166 (248)
Q Consensus 160 ee~e~~~ 166 (248)
|-.+.+.
T Consensus 272 e~~~~Ht 278 (311)
T KOG0277|consen 272 ETVDHHT 278 (311)
T ss_pred hhhhccc
Confidence 6666553
No 73
>KOG0646|consensus
Probab=99.31 E-value=1.8e-11 Score=115.00 Aligned_cols=125 Identities=17% Similarity=0.312 Sum_probs=105.4
Q ss_pred hcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC---------CCceeEEecCCCCCCeeEE
Q psy2083 9 DKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR---------ADKPLRVKDHMYGLPIRDI 79 (248)
Q Consensus 9 ~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR---------s~~pl~~~~h~~~~pI~sI 79 (248)
.+|+++..+..| ...|+.+.|+.|+.++|++|-|+ .|.+|++- +.+|+..+ +.|+.+|+++
T Consensus 111 ssG~LL~v~~aH-YQ~ITcL~fs~dgs~iiTgskDg--------~V~vW~l~~lv~a~~~~~~~p~~~f-~~HtlsITDl 180 (476)
T KOG0646|consen 111 SSGILLNVLSAH-YQSITCLKFSDDGSHIITGSKDG--------AVLVWLLTDLVSADNDHSVKPLHIF-SDHTLSITDL 180 (476)
T ss_pred ccccHHHHHHhh-ccceeEEEEeCCCcEEEecCCCc--------cEEEEEEEeecccccCCCccceeee-ccCcceeEEE
Confidence 578888888665 89999999999998898988885 89999863 34677776 3456999999
Q ss_pred EEcCCc----ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 80 KFHDNY----VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 80 ~F~~d~----l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
.-.+.+ |. +|.|++||+||+..|.++.++.. +.+|+++++.|-...+++|+++|+|.+-.+-.+
T Consensus 181 ~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~f--p~si~av~lDpae~~~yiGt~~G~I~~~~~~~~ 249 (476)
T KOG0646|consen 181 QIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITF--PSSIKAVALDPAERVVYIGTEEGKIFQNLLFKL 249 (476)
T ss_pred EecCCCccceEEEecCCceEEEEEeccceeeEEEec--CCcceeEEEcccccEEEecCCcceEEeeehhcC
Confidence 877664 55 46899999999999999999998 899999999999999999999999987765554
No 74
>KOG0643|consensus
Probab=99.31 E-value=1.8e-11 Score=108.93 Aligned_cols=124 Identities=14% Similarity=0.193 Sum_probs=99.9
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---e
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---V 86 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l 86 (248)
+..++..+..+ .+.++.+.+.|-+..++++.+++ .|..||+|+++.+...+..|+..|++++|+++. |
T Consensus 136 s~ep~~kI~t~-~skit~a~Wg~l~~~ii~Ghe~G--------~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~Fi 206 (327)
T KOG0643|consen 136 SEEPYLKIPTP-DSKITSALWGPLGETIIAGHEDG--------SISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFI 206 (327)
T ss_pred ccCceEEecCC-ccceeeeeecccCCEEEEecCCC--------cEEEEEcccCceeeechhhhccccccccccCCcceEE
Confidence 44456667766 47889999999877777777664 899999999987776555555899999999997 7
Q ss_pred eeeCCCeEEEEECCCCCEEEEeec------------------------------------------------------CC
Q psy2083 87 LSMDSSVVKIWSKDNGSLFTCIES------------------------------------------------------GD 112 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~tGk~~~tie~------------------------------------------------------~h 112 (248)
.+|-|.+-|+||.++-.++.++.. +|
T Consensus 207 T~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGH 286 (327)
T KOG0643|consen 207 TGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGH 286 (327)
T ss_pred ecccCccceeeeccceeeEEEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhcccccc
Confidence 778899999999987555444321 26
Q ss_pred CCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 113 QTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 113 ~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
-.|||+|+|+|+|....+|+||+.|++...
T Consensus 287 FGPINsvAfhPdGksYsSGGEDG~VR~h~F 316 (327)
T KOG0643|consen 287 FGPINSVAFHPDGKSYSSGGEDGYVRLHHF 316 (327)
T ss_pred ccCcceeEECCCCcccccCCCCceEEEEEe
Confidence 789999999999999999999999998754
No 75
>KOG0269|consensus
Probab=99.31 E-value=4.2e-12 Score=125.03 Aligned_cols=123 Identities=17% Similarity=0.250 Sum_probs=98.7
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLS 88 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~S 88 (248)
++++.|..| +-.|++++|++-.-.++.+|+.+ |+||+||+|+.+...++- ++...|++|.|+|.. .++
T Consensus 124 k~l~~f~EH-~Rs~~~ldfh~tep~iliSGSQD-------g~vK~~DlR~~~S~~t~~-~nSESiRDV~fsp~~~~~F~s 194 (839)
T KOG0269|consen 124 KLLTVFNEH-ERSANKLDFHSTEPNILISGSQD-------GTVKCWDLRSKKSKSTFR-SNSESIRDVKFSPGYGNKFAS 194 (839)
T ss_pred hhhhHhhhh-ccceeeeeeccCCccEEEecCCC-------ceEEEEeeeccccccccc-ccchhhhceeeccCCCceEEE
Confidence 455566555 68999999998766666666654 599999999988766653 345789999999975 444
Q ss_pred -eCCCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 89 -MDSSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 89 -sdd~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.|.|++.+||++. .++...+.. |..+|-++-++||+++|++|+.|++|++|+.-.
T Consensus 195 ~~dsG~lqlWDlRqp~r~~~k~~A-H~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~ 251 (839)
T KOG0269|consen 195 IHDSGYLQLWDLRQPDRCEKKLTA-HNGPVLCLNWHPNREWLATGGRDKMVKIWDMTD 251 (839)
T ss_pred ecCCceEEEeeccCchhHHHHhhc-ccCceEEEeecCCCceeeecCCCccEEEEeccC
Confidence 4889999999985 345666777 699999999999999999999999999999753
No 76
>KOG0310|consensus
Probab=99.30 E-value=1.4e-11 Score=116.14 Aligned_cols=127 Identities=9% Similarity=0.156 Sum_probs=100.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
||+++--+++.+.+| +..|..+.|.|+++.+++.|+|++ .+++||+.+..- +..-.+|...|.+.+|+|..
T Consensus 95 fD~k~r~iLR~~~ah-~apv~~~~f~~~d~t~l~s~sDd~-------v~k~~d~s~a~v-~~~l~~htDYVR~g~~~~~~ 165 (487)
T KOG0310|consen 95 FDMKSRVILRQLYAH-QAPVHVTKFSPQDNTMLVSGSDDK-------VVKYWDLSTAYV-QAELSGHTDYVRCGDISPAN 165 (487)
T ss_pred eccccHHHHHHHhhc-cCceeEEEecccCCeEEEecCCCc-------eEEEEEcCCcEE-EEEecCCcceeEeeccccCC
Confidence 444444456666666 899999999999988888888874 899999998764 43334556999999999974
Q ss_pred ---ee-eeCCCeEEEEECCCC-CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 ---VL-SMDSSVVKIWSKDNG-SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 ---l~-Ssdd~~IKIWD~~tG-k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++-|+.||+||+++- ..+.++. |..||-++++-|.|++|++|+ .+.|++||+-.
T Consensus 166 ~hivvtGsYDg~vrl~DtR~~~~~v~eln--hg~pVe~vl~lpsgs~iasAg-Gn~vkVWDl~~ 226 (487)
T KOG0310|consen 166 DHIVVTGSYDGKVRLWDTRSLTSRVVELN--HGCPVESVLALPSGSLIASAG-GNSVKVWDLTT 226 (487)
T ss_pred CeEEEecCCCceEEEEEeccCCceeEEec--CCCceeeEEEcCCCCEEEEcC-CCeEEEEEecC
Confidence 44 467999999999975 5555554 589999999999999999988 78899999864
No 77
>KOG0292|consensus
Probab=99.30 E-value=4.2e-12 Score=126.71 Aligned_cols=118 Identities=17% Similarity=0.250 Sum_probs=102.5
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeC
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMD 90 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssd 90 (248)
++.|+.. ++.|-++.|+|..-+++++=-+ |.|+|||-|-+..+..++ .|++||+.|.|||++ |+++|
T Consensus 2 ltkfEsk-SsRvKglsFHP~rPwILtslHs--------G~IQlWDYRM~tli~rFd-eHdGpVRgv~FH~~qplFVSGGD 71 (1202)
T KOG0292|consen 2 LTKFESK-SSRVKGLSFHPKRPWILTSLHS--------GVIQLWDYRMGTLIDRFD-EHDGPVRGVDFHPTQPLFVSGGD 71 (1202)
T ss_pred cchhhcc-cccccceecCCCCCEEEEeecC--------ceeeeehhhhhhHHhhhh-ccCCccceeeecCCCCeEEecCC
Confidence 4456665 6789999999988877776555 489999999998877764 445999999999998 66679
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
|..||+|+.++.+++-++.+ |-.-|+.+.|++.=..|++||+|.+|++|.-
T Consensus 72 DykIkVWnYk~rrclftL~G-HlDYVRt~~FHheyPWIlSASDDQTIrIWNw 122 (1202)
T KOG0292|consen 72 DYKIKVWNYKTRRCLFTLLG-HLDYVRTVFFHHEYPWILSASDDQTIRIWNW 122 (1202)
T ss_pred ccEEEEEecccceehhhhcc-ccceeEEeeccCCCceEEEccCCCeEEEEec
Confidence 99999999999999999999 6999999999999999999999999999973
No 78
>KOG0313|consensus
Probab=99.29 E-value=2.4e-11 Score=112.02 Aligned_cols=125 Identities=13% Similarity=0.193 Sum_probs=101.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc--eeEEecCCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK--PLRVKDHMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~--pl~~~~h~~~~pI~sI~F~~ 83 (248)
-|..+|.++.++.+. ...+++.+.|.+.+++++|+|. .++|||-|++. .+...--+|...|.+|.++|
T Consensus 286 WDletg~~~~~~~~~--ksl~~i~~~~~~~Ll~~gssdr--------~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp 355 (423)
T KOG0313|consen 286 WDLETGGLKSTLTTN--KSLNCISYSPLSKLLASGSSDR--------HIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSP 355 (423)
T ss_pred EEeecccceeeeecC--cceeEeecccccceeeecCCCC--------ceeecCCCCCCCceeEEeeecchhhhhheecCC
Confidence 456678888888875 6889999999887777877776 89999999873 22222234447999999999
Q ss_pred Cc---ee-eeCCCeEEEEECCCCC-EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 84 NY---VL-SMDSSVVKIWSKDNGS-LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 84 d~---l~-Ssdd~~IKIWD~~tGk-~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
.. ++ .+.|+++|+||.++-+ ++..|.+ |...|-++.|+ ++++|++|+.|.+|+++--
T Consensus 356 ~~~~~~~S~S~D~t~klWDvRS~k~plydI~~-h~DKvl~vdW~-~~~~IvSGGaD~~l~i~~~ 417 (423)
T KOG0313|consen 356 TNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAG-HNDKVLSVDWN-EGGLIVSGGADNKLRIFKG 417 (423)
T ss_pred CCceEEEEEecCCeEEEEEeccCCCcceeecc-CCceEEEEecc-CCceEEeccCcceEEEecc
Confidence 86 44 4689999999999988 9999998 68999998885 6778999999999999853
No 79
>KOG1539|consensus
Probab=99.29 E-value=1.4e-11 Score=122.15 Aligned_cols=129 Identities=10% Similarity=0.165 Sum_probs=111.4
Q ss_pred cchhcCceeEEEe--cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIE--SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~--~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~ 83 (248)
+|+++|.--.++. ..|.+.|++++...-+..++++|.++ .++.||.....++....-+ .+++.+..|.
T Consensus 475 fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~G--------ilkfw~f~~k~l~~~l~l~--~~~~~iv~hr 544 (910)
T KOG1539|consen 475 FNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADG--------ILKFWDFKKKVLKKSLRLG--SSITGIVYHR 544 (910)
T ss_pred EEcccCeeecccccCccccCceeEEEecCCCceEEEccCcc--------eEEEEecCCcceeeeeccC--CCcceeeeee
Confidence 7888998888884 33478999999887777788888875 8999999988776665544 7899999987
Q ss_pred Cc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 84 NY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 84 d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
.. ++.+||-.|++.|..|.+.+..+.+ |...||+++|+|||..|++|+.|++|++||+|.-
T Consensus 545 ~s~l~a~~~ddf~I~vvD~~t~kvvR~f~g-h~nritd~~FS~DgrWlisasmD~tIr~wDlpt~ 608 (910)
T KOG1539|consen 545 VSDLLAIALDDFSIRVVDVVTRKVVREFWG-HGNRITDMTFSPDGRWLISASMDSTIRTWDLPTG 608 (910)
T ss_pred hhhhhhhhcCceeEEEEEchhhhhhHHhhc-cccceeeeEeCCCCcEEEEeecCCcEEEEeccCc
Confidence 75 5567999999999999999999998 7999999999999999999999999999999974
No 80
>KOG0281|consensus
Probab=99.29 E-value=3.7e-12 Score=116.69 Aligned_cols=153 Identities=12% Similarity=0.282 Sum_probs=116.6
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCcee-eeCCCeEEEEECC
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNYVL-SMDSSVVKIWSKD 100 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~l~-Ssdd~~IKIWD~~ 100 (248)
-+.||.+.|.+ .++++|++|. ||++||+.++..+.+. |+|...|-++.+....|+ +|.|.+|+|||++
T Consensus 320 rAaVNvVdfd~--kyIVsASgDR--------TikvW~~st~efvRtl-~gHkRGIAClQYr~rlvVSGSSDntIRlwdi~ 388 (499)
T KOG0281|consen 320 RAAVNVVDFDD--KYIVSASGDR--------TIKVWSTSTCEFVRTL-NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE 388 (499)
T ss_pred hhheeeecccc--ceEEEecCCc--------eEEEEeccceeeehhh-hcccccceehhccCeEEEecCCCceEEEEecc
Confidence 56777776654 4888888886 9999999998877665 566688999998877644 5689999999999
Q ss_pred CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC-CCC---CCCccccccchhhhhhccccccccCCcee
Q psy2083 101 NGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS-LGP---APKWCGFLDNLTEELEENIIENVYDDYKF 176 (248)
Q Consensus 101 tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~-lG~---aP~wcs~ld~~tee~e~~~~~~~yd~y~f 176 (248)
.|+++..+++ |+.-|+++.| |...|++|.-||+|++|++.+ |-| +..-| |-.+.|.-.- --.--||++.-
T Consensus 389 ~G~cLRvLeG-HEeLvRciRF--d~krIVSGaYDGkikvWdl~aaldpra~~~~~C--l~~lv~hsgR-VFrLQFD~fqI 462 (499)
T KOG0281|consen 389 CGACLRVLEG-HEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC--LRTLVEHSGR-VFRLQFDEFQI 462 (499)
T ss_pred ccHHHHHHhc-hHHhhhheee--cCceeeeccccceEEEEecccccCCcccccchH--HHhhhhccce-eEEEeecceEE
Confidence 9999999999 6999998888 677899999999999999754 222 22224 4444441110 11234999999
Q ss_pred ecHhHHhhcCCcccc
Q psy2083 177 VTRQELEDLGLGHLI 191 (248)
Q Consensus 177 vt~~~l~~l~~~~li 191 (248)
|+..-..++-+|+..
T Consensus 463 vsssHddtILiWdFl 477 (499)
T KOG0281|consen 463 ISSSHDDTILIWDFL 477 (499)
T ss_pred EeccCCCeEEEEEcC
Confidence 999988888888743
No 81
>KOG0284|consensus
Probab=99.25 E-value=8.6e-12 Score=115.81 Aligned_cols=126 Identities=12% Similarity=0.187 Sum_probs=109.7
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d 84 (248)
-|+++|.|++++.+| +..|..+.|.+++.+|+++|.|. .+++||+|+-+.+.++ .|. ..|+++.|||-
T Consensus 249 WDprSg~cl~tlh~H-KntVl~~~f~~n~N~Llt~skD~--------~~kv~DiR~mkEl~~~r~Hk--kdv~~~~WhP~ 317 (464)
T KOG0284|consen 249 WDPRSGSCLATLHGH-KNTVLAVKFNPNGNWLLTGSKDQ--------SCKVFDIRTMKELFTYRGHK--KDVTSLTWHPL 317 (464)
T ss_pred ecCCCcchhhhhhhc-cceEEEEEEcCCCCeeEEccCCc--------eEEEEehhHhHHHHHhhcch--hhheeeccccc
Confidence 478999999998887 89999999999888898988886 8999999977766654 455 88999999986
Q ss_pred c---ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 85 Y---VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 85 ~---l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
. ++ ++.|+.|..|....-+++..++..|...|.+++++|=|.+|++|+.|.+++.|-=
T Consensus 318 ~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r 379 (464)
T KOG0284|consen 318 NESLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTR 379 (464)
T ss_pred cccceeeccCCCceEEEeccccccccCCCcccccceeeeeccccceeEeecCCCcceeeecc
Confidence 4 33 3579999999998778888888767899999999999999999999999999963
No 82
>KOG0303|consensus
Probab=99.24 E-value=6e-11 Score=110.04 Aligned_cols=114 Identities=11% Similarity=0.222 Sum_probs=93.2
Q ss_pred cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-------ceeEEecCCCCCCeeEEEEcCCc---ee-
Q psy2083 19 SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-------KPLRVKDHMYGLPIRDIKFHDNY---VL- 87 (248)
Q Consensus 19 ~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-------~pl~~~~h~~~~pI~sI~F~~d~---l~- 87 (248)
.+|.+.|-++.|.|-+...+++|+++. +|++|+|=.+ .|+... .+|...|.-|+|||.. ++
T Consensus 78 ~GHt~~vLDi~w~PfnD~vIASgSeD~-------~v~vW~IPe~~l~~~ltepvv~L-~gH~rrVg~V~wHPtA~NVLls 149 (472)
T KOG0303|consen 78 CGHTAPVLDIDWCPFNDCVIASGSEDT-------KVMVWQIPENGLTRDLTEPVVEL-YGHQRRVGLVQWHPTAPNVLLS 149 (472)
T ss_pred cCccccccccccCccCCceeecCCCCc-------eEEEEECCCcccccCcccceEEE-eecceeEEEEeecccchhhHhh
Confidence 345899999999997777666656553 9999998654 344443 2334889999999985 44
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
++.|.+|+|||..||+.+-++. |+.-|.+++|+-||++|++++.|++|++|+.
T Consensus 150 ag~Dn~v~iWnv~tgeali~l~--hpd~i~S~sfn~dGs~l~TtckDKkvRv~dp 202 (472)
T KOG0303|consen 150 AGSDNTVSIWNVGTGEALITLD--HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDP 202 (472)
T ss_pred ccCCceEEEEeccCCceeeecC--CCCeEEEEEeccCCceeeeecccceeEEEcC
Confidence 4579999999999999998887 5999999999999999999999999999984
No 83
>KOG0296|consensus
Probab=99.24 E-value=2e-10 Score=105.47 Aligned_cols=120 Identities=12% Similarity=0.174 Sum_probs=102.8
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC-
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD- 90 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd- 90 (248)
+.+|..| .+.|.++...|+..+.+++|+|+ .--|||+.++..+... .+|+..|+++.|+.++ |+++|
T Consensus 57 ~~tF~~H-~~svFavsl~P~~~l~aTGGgDD--------~AflW~~~~ge~~~el-tgHKDSVt~~~FshdgtlLATGdm 126 (399)
T KOG0296|consen 57 LVTFDKH-TDSVFAVSLHPNNNLVATGGGDD--------LAFLWDISTGEFAGEL-TGHKDSVTCCSFSHDGTLLATGDM 126 (399)
T ss_pred eeehhhc-CCceEEEEeCCCCceEEecCCCc--------eEEEEEccCCcceeEe-cCCCCceEEEEEccCceEEEecCC
Confidence 4566665 79999999999887788999998 6899999998744443 2455899999999998 67775
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++.|+||+..+|.....+.. .-..|-.++++|-+..|++|++|+.+..|-||.
T Consensus 127 sG~v~v~~~stg~~~~~~~~-e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~ 179 (399)
T KOG0296|consen 127 SGKVLVFKVSTGGEQWKLDQ-EVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPS 179 (399)
T ss_pred CccEEEEEcccCceEEEeec-ccCceEEEEecccccEEEeecCCCcEEEEECCC
Confidence 99999999999999999863 157999999999999999999999999999998
No 84
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.22 E-value=5e-10 Score=97.51 Aligned_cols=125 Identities=7% Similarity=0.118 Sum_probs=94.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|..+|+++..++.+ ..+..++++|++..+++++.++ +.|++||+++++.+...... ..+..+.|+|++
T Consensus 16 ~d~~t~~~~~~~~~~--~~~~~l~~~~dg~~l~~~~~~~-------~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~~g 84 (300)
T TIGR03866 16 IDTATLEVTRTFPVG--QRPRGITLSKDGKLLYVCASDS-------DTIQVIDLATGEVIGTLPSG--PDPELFALHPNG 84 (300)
T ss_pred EECCCCceEEEEECC--CCCCceEECCCCCEEEEEECCC-------CeEEEEECCCCcEEEeccCC--CCccEEEECCCC
Confidence 466788888888865 4577899999887776555443 48999999998776654332 235688999987
Q ss_pred --e-ee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC-eEEEEEcC
Q psy2083 86 --V-LS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK-KILTYYIP 143 (248)
Q Consensus 86 --l-~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~-~I~~w~Ip 143 (248)
+ ++ ++++.|++||.++++.+..++. ...+++++|+|||.++++++.++ .+..|+..
T Consensus 85 ~~l~~~~~~~~~l~~~d~~~~~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~ 145 (300)
T TIGR03866 85 KILYIANEDDNLVTVIDIETRKVLAEIPV--GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTK 145 (300)
T ss_pred CEEEEEcCCCCeEEEEECCCCeEEeEeeC--CCCcceEEECCCCCEEEEEecCCCeEEEEeCC
Confidence 3 33 4688999999999998888875 45678999999999999998875 45566653
No 85
>KOG0772|consensus
Probab=99.21 E-value=5.7e-11 Score=113.15 Aligned_cols=119 Identities=11% Similarity=0.275 Sum_probs=89.1
Q ss_pred CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce-eEE---e-cCCCCCCeeEEEEcCCc--ee-eeCC
Q psy2083 20 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP-LRV---K-DHMYGLPIRDIKFHDNY--VL-SMDS 91 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p-l~~---~-~h~~~~pI~sI~F~~d~--l~-Ssdd 91 (248)
+|...+++.||.|++...|..++++ |++||||+...+. +.+ + ..+-.-|+++++|++++ |+ ++.|
T Consensus 266 GHia~lt~g~whP~~k~~FlT~s~D-------gtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~D 338 (641)
T KOG0772|consen 266 GHIAELTCGCWHPDNKEEFLTCSYD-------GTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLD 338 (641)
T ss_pred CceeeeeccccccCcccceEEecCC-------CcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccC
Confidence 3478899999999988866555554 5999999987632 322 2 22333589999999998 44 4689
Q ss_pred CeEEEEECCCCC--EEEEeecCCCC--CeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 92 SVVKIWSKDNGS--LFTCIESGDQT--QFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 92 ~~IKIWD~~tGk--~~~tie~~h~~--~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
+.|.|||..+.. +...+...|.. .|+|+.|++||+.|++=+.|.++++|++.+.
T Consensus 339 GSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~ 396 (641)
T KOG0772|consen 339 GSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQF 396 (641)
T ss_pred CceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecccc
Confidence 999999975422 22223221444 9999999999999999999999999998765
No 86
>KOG0305|consensus
Probab=99.21 E-value=9e-11 Score=112.82 Aligned_cols=152 Identities=14% Similarity=0.214 Sum_probs=120.9
Q ss_pred CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee---CCCe
Q psy2083 20 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM---DSSV 93 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss---dd~~ 93 (248)
+|...|-.+.+.+|+..++++|.|+ .|.|||.++..|+..+. .|...|+.++|+|-. |+++ .|++
T Consensus 299 ~H~qeVCgLkws~d~~~lASGgnDN--------~~~Iwd~~~~~p~~~~~-~H~aAVKA~awcP~q~~lLAsGGGs~D~~ 369 (484)
T KOG0305|consen 299 GHRQEVCGLKWSPDGNQLASGGNDN--------VVFIWDGLSPEPKFTFT-EHTAAVKALAWCPWQSGLLATGGGSADRC 369 (484)
T ss_pred cccceeeeeEECCCCCeeccCCCcc--------ceEeccCCCccccEEEe-ccceeeeEeeeCCCccCceEEcCCCcccE
Confidence 3478999999999888888888887 89999999888877652 334899999999975 5543 5999
Q ss_pred EEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe--CCCeEEEEEcCCCCCCCCccccccchhhhhhccccc---
Q psy2083 94 VKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN--ENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIE--- 168 (248)
Q Consensus 94 IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~--ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~~--- 168 (248)
||+||..+|+.+.++.. .+.|.+|.|+|..+.|+++- .+..|.+|..|++-+. .+|--|...
T Consensus 370 i~fwn~~~g~~i~~vdt--gsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~-----------~~l~gH~~RVl~ 436 (484)
T KOG0305|consen 370 IKFWNTNTGARIDSVDT--GSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLV-----------AELLGHTSRVLY 436 (484)
T ss_pred EEEEEcCCCcEeccccc--CCceeeEEEcCCCCEEEEecCCCCCcEEEEecccccee-----------eeecCCcceeEE
Confidence 99999999999999998 79999999999998888775 3568999999884333 333333322
Q ss_pred --cccCCceeecHhHHhhcCCccccCC
Q psy2083 169 --NVYDDYKFVTRQELEDLGLGHLIGT 193 (248)
Q Consensus 169 --~~yd~y~fvt~~~l~~l~~~~ligt 193 (248)
.--|+-..+|-.-.|.|.+|++-+.
T Consensus 437 la~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 437 LALSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred EEECCCCCEEEEecccCcEEeccccCC
Confidence 2246788889999999999988774
No 87
>KOG0640|consensus
Probab=99.21 E-value=5.4e-11 Score=107.82 Aligned_cols=114 Identities=11% Similarity=0.259 Sum_probs=95.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE--ecCCCCCCeeEEEEcCCc---eeeeCCCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV--KDHMYGLPIRDIKFHDNY---VLSMDSSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~--~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIW 97 (248)
..|.++.|.|.| -.+.+|.+. .+++|||+.+-+++.. .+.+|...|++|.+++.+ +.+|-|+.||||
T Consensus 217 ~~vrsiSfHPsG-efllvgTdH-------p~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~Iklw 288 (430)
T KOG0640|consen 217 EPVRSISFHPSG-EFLLVGTDH-------PTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLW 288 (430)
T ss_pred ceeeeEeecCCC-ceEEEecCC-------CceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEee
Confidence 378888888854 445555555 3999999999877654 467788999999999997 666789999999
Q ss_pred ECCCCCEEEEeec-CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 98 SKDNGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 98 D~~tGk~~~tie~-~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|--+++++.+|.. |..+.|.+..|..||.+|++.+.|..+++|.|..
T Consensus 289 DGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t 336 (430)
T KOG0640|consen 289 DGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEIST 336 (430)
T ss_pred ccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecC
Confidence 9999999999974 3357999999999999999999999999999854
No 88
>KOG0275|consensus
Probab=99.19 E-value=2.7e-11 Score=110.30 Aligned_cols=126 Identities=12% Similarity=0.279 Sum_probs=105.6
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~ 85 (248)
+..+|.|++-|+..|+..|+++.|+.|+..+++++.|. +||+.-+.+|+.+..+ +| ...|+.+.|.+++
T Consensus 291 ri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~--------tvRiHGlKSGK~LKEfrGH--sSyvn~a~ft~dG 360 (508)
T KOG0275|consen 291 RIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQ--------TVRIHGLKSGKCLKEFRGH--SSYVNEATFTDDG 360 (508)
T ss_pred EEecchHHHHhhhhhccCeeEEEEccCcchhhcccccc--------eEEEeccccchhHHHhcCc--cccccceEEcCCC
Confidence 45678899999977789999999999999898988886 9999999999988764 45 4899999999998
Q ss_pred --ee-eeCCCeEEEEECCCCCEEEEeecC-CCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEc
Q psy2083 86 --VL-SMDSSVVKIWSKDNGSLFTCIESG-DQTQFNNLCHIPES-GMMFIANENKKILTYYI 142 (248)
Q Consensus 86 --l~-Ssdd~~IKIWD~~tGk~~~tie~~-h~~~In~l~~~pds-gll~sa~ed~~I~~w~I 142 (248)
|+ ++.|++||+|+.++++++.++.+. ...+||++-..|.+ .-+++++..++|.+-.+
T Consensus 361 ~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~ 422 (508)
T KOG0275|consen 361 HHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNM 422 (508)
T ss_pred CeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEec
Confidence 55 468999999999999999999862 24689999998855 56777777788776654
No 89
>KOG1188|consensus
Probab=99.19 E-value=1.3e-10 Score=106.17 Aligned_cols=130 Identities=12% Similarity=0.201 Sum_probs=94.5
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCC-CCc-EEEeecCceeeeecCCeeEEEEcCCCce--eEEecCCCCCCeeEEEE
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPE-SGM-MFIANENKKILTYYIPAFYLYDIRADKP--LRVKDHMYGLPIRDIKF 81 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~-~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~p--l~~~~h~~~~pI~sI~F 81 (248)
+|..+|+.+..|.++ ++.+|.+.|.++ +.. +.++++| |+||+||+|+... ........+.|-.++.-
T Consensus 55 yd~~tg~~l~~fk~~-~~~~N~vrf~~~ds~h~v~s~ssD--------G~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~ 125 (376)
T KOG1188|consen 55 YDKGTGQLLEEFKGP-PATTNGVRFISCDSPHGVISCSSD--------GTVRLWDIRSQAESARISWTQQSGTPFICLDL 125 (376)
T ss_pred EeccchhhhheecCC-CCcccceEEecCCCCCeeEEeccC--------CeEEEEEeecchhhhheeccCCCCCcceEeec
Confidence 567788888888887 789999999875 444 4455555 5999999999743 33333332456666666
Q ss_pred cCCc-ee-ee-----CCCeEEEEECCCCCE-EEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCC
Q psy2083 82 HDNY-VL-SM-----DSSVVKIWSKDNGSL-FTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 82 ~~d~-l~-Ss-----dd~~IKIWD~~tGk~-~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~ 144 (248)
.-.. ++ ++ ++-.|-+||.++.+. +..+...|..+|++++|+|+. .+|++|+-||-|.+|++..
T Consensus 126 nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~ 197 (376)
T KOG1188|consen 126 NCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKK 197 (376)
T ss_pred cCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCC
Confidence 5333 33 22 466888999998665 666654479999999999954 9999999999999999743
No 90
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.19 E-value=1.1e-09 Score=95.41 Aligned_cols=126 Identities=10% Similarity=0.160 Sum_probs=94.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|..+|+....+..+ ..+..++++|++..+++++.++ +.|++||+++++++....++ ..+.+++|+|++
T Consensus 58 ~d~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~-------~~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~dg 126 (300)
T TIGR03866 58 IDLATGEVIGTLPSG--PDPELFALHPNGKILYIANEDD-------NLVTVIDIETRKVLAEIPVG--VEPEGMAVSPDG 126 (300)
T ss_pred EECCCCcEEEeccCC--CCccEEEECCCCCEEEEEcCCC-------CeEEEEECCCCeEEeEeeCC--CCcceEEECCCC
Confidence 566677777776654 3456788888877777666543 48999999998877666543 457899999998
Q ss_pred --ee-eeC-CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCC
Q psy2083 86 --VL-SMD-SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPS 144 (248)
Q Consensus 86 --l~-Ssd-d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~ 144 (248)
++ ++. ...+.+||.++++.+..+.. ...+++++|+|||..|++++ .++.|.+|++..
T Consensus 127 ~~l~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~ 188 (300)
T TIGR03866 127 KIVVNTSETTNMAHFIDTKTYEIVDNVLV--DQRPRFAEFTADGKELWVSSEIGGTVSVIDVAT 188 (300)
T ss_pred CEEEEEecCCCeEEEEeCCCCeEEEEEEc--CCCccEEEECCCCCEEEEEcCCCCEEEEEEcCc
Confidence 33 343 35688899999988777655 45668899999999886665 589999999865
No 91
>KOG0267|consensus
Probab=99.19 E-value=2.6e-11 Score=118.94 Aligned_cols=118 Identities=13% Similarity=0.194 Sum_probs=98.2
Q ss_pred EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-eeCCC
Q psy2083 16 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSS 92 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~ 92 (248)
++.+| .+.|-++.|..+..++.+++.+ |+||+|||...+-+.+.. +|..++.+|.|||-+ .+ ++.|.
T Consensus 65 S~~~h-espIeSl~f~~~E~Llaagsas--------gtiK~wDleeAk~vrtLt-gh~~~~~sv~f~P~~~~~a~gStdt 134 (825)
T KOG0267|consen 65 SLTGH-ESPIESLTFDTSERLLAAGSAS--------GTIKVWDLEEAKIVRTLT-GHLLNITSVDFHPYGEFFASGSTDT 134 (825)
T ss_pred eeecc-CCcceeeecCcchhhhcccccC--------Cceeeeehhhhhhhhhhh-ccccCcceeeeccceEEeccccccc
Confidence 34444 7899999998876666555555 499999999988777652 445899999999987 33 46788
Q ss_pred eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 93 VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 93 ~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
-++|||.+.-.+..++.+ |...++.+.|+|+|.++++|++|..+++|+.++
T Consensus 135 d~~iwD~Rk~Gc~~~~~s-~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~a 185 (825)
T KOG0267|consen 135 DLKIWDIRKKGCSHTYKS-HTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTA 185 (825)
T ss_pred cceehhhhccCceeeecC-CcceeEEEeecCCCceeeccCCcceeeeecccc
Confidence 999999998888999998 699999999999999999999999999999854
No 92
>KOG0300|consensus
Probab=99.18 E-value=2.6e-11 Score=110.23 Aligned_cols=169 Identities=8% Similarity=0.167 Sum_probs=125.0
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC----CCc-------------------
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR----ADK------------------- 63 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR----s~~------------------- 63 (248)
...+|+|+.+..+| .+.||++.|++.+.+++++++|. +..||-.. .++
T Consensus 176 s~Esg~CL~~Y~GH-~GSVNsikfh~s~~L~lTaSGD~--------taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~ 246 (481)
T KOG0300|consen 176 SLESGACLATYTGH-TGSVNSIKFHNSGLLLLTASGDE--------TAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEH 246 (481)
T ss_pred eeccccceeeeccc-ccceeeEEeccccceEEEccCCc--------chHHHHHhhcCcCCCCCCCCCCCchhhhhccccc
Confidence 34689999998887 89999999999776677887775 77888611 111
Q ss_pred -----------------eeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC
Q psy2083 64 -----------------PLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP 123 (248)
Q Consensus 64 -----------------pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p 123 (248)
|+..+ .+|..+|.+..|...+ |.++-|++-.+||.++|+++..+.+ |..+++.+|-+|
T Consensus 247 ~~d~d~~~~sD~~tiRvPl~~l-tgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtG-Hd~ELtHcstHp 324 (481)
T KOG0300|consen 247 NRDTDSSEKSDGHTIRVPLMRL-TGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTG-HDSELTHCSTHP 324 (481)
T ss_pred ccccccccccCCceeeeeeeee-eccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccC-cchhccccccCC
Confidence 22222 1334667777776655 5567899999999999999999998 799999999999
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhccccccccC-CceeecHhHHhhcCCccccCC
Q psy2083 124 ESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYD-DYKFVTRQELEDLGLGHLIGT 193 (248)
Q Consensus 124 dsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~~~~yd-~y~fvt~~~l~~l~~~~ligt 193 (248)
...++++++.|.+.++|+...--++ -+-+..=|+ .-...+|. ||+.|+-++...+.+|+|-..
T Consensus 325 tQrLVvTsSrDtTFRLWDFReaI~s---V~VFQGHtd----tVTS~vF~~dd~vVSgSDDrTvKvWdLrNM 388 (481)
T KOG0300|consen 325 TQRLVVTSSRDTTFRLWDFREAIQS---VAVFQGHTD----TVTSVVFNTDDRVVSGSDDRTVKVWDLRNM 388 (481)
T ss_pred cceEEEEeccCceeEeccchhhcce---eeeeccccc----ceeEEEEecCCceeecCCCceEEEeeeccc
Confidence 9999999999999999986532222 122222222 11234444 999999999999999998764
No 93
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.18 E-value=9e-10 Score=94.37 Aligned_cols=116 Identities=11% Similarity=0.206 Sum_probs=85.6
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-ee-
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SM- 89 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ss- 89 (248)
...++-...+.|.+++++|++..+++..+.. .+.|.|||++ ++++..... .+++.|.|+|++ ++ ++
T Consensus 51 ~~~i~l~~~~~I~~~~WsP~g~~favi~g~~------~~~v~lyd~~-~~~i~~~~~---~~~n~i~wsP~G~~l~~~g~ 120 (194)
T PF08662_consen 51 VESIELKKEGPIHDVAWSPNGNEFAVIYGSM------PAKVTLYDVK-GKKIFSFGT---QPRNTISWSPDGRFLVLAGF 120 (194)
T ss_pred cceeeccCCCceEEEEECcCCCEEEEEEccC------CcccEEEcCc-ccEeEeecC---CCceEEEECCCCCEEEEEEc
Confidence 3444432235699999999877765443321 2489999997 666666542 578999999998 33 33
Q ss_pred --CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC------CCeEEEEEc
Q psy2083 90 --DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE------NKKILTYYI 142 (248)
Q Consensus 90 --dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e------d~~I~~w~I 142 (248)
..+.|.+||.++.+.+.+.+. ..+++++|+|||.+|+++.. |..+++|..
T Consensus 121 ~n~~G~l~~wd~~~~~~i~~~~~---~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~ 178 (194)
T PF08662_consen 121 GNLNGDLEFWDVRKKKKISTFEH---SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSF 178 (194)
T ss_pred cCCCcEEEEEECCCCEEeecccc---CcEEEEEEcCCCCEEEEEEeccceeccccEEEEEe
Confidence 146799999999999888764 45789999999999999975 566788865
No 94
>KOG0293|consensus
Probab=99.18 E-value=1.4e-10 Score=108.21 Aligned_cols=116 Identities=12% Similarity=0.165 Sum_probs=96.4
Q ss_pred EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCcee---EEecCCCCCCeeEEEEcCCc---eeeeC
Q psy2083 17 IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPL---RVKDHMYGLPIRDIKFHDNY---VLSMD 90 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl---~~~~h~~~~pI~sI~F~~d~---l~Ssd 90 (248)
+..| .+.|+-+.|+++|.+|++|+.|. +.-+|++-...-+ .+. -+|..||.-|.|+||. ++++.
T Consensus 220 l~~h-tdEVWfl~FS~nGkyLAsaSkD~--------Taiiw~v~~d~~~kl~~tl-vgh~~~V~yi~wSPDdryLlaCg~ 289 (519)
T KOG0293|consen 220 LQDH-TDEVWFLQFSHNGKYLASASKDS--------TAIIWIVVYDVHFKLKKTL-VGHSQPVSYIMWSPDDRYLLACGF 289 (519)
T ss_pred HhhC-CCcEEEEEEcCCCeeEeeccCCc--------eEEEEEEecCcceeeeeee-ecccCceEEEEECCCCCeEEecCc
Confidence 3444 78999999999988899998887 8999998765332 222 2444899999999997 55567
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+..+++||..+|..++.+..++...+.|+||.|||.-+++|+.|++|..|+.
T Consensus 290 ~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdl 341 (519)
T KOG0293|consen 290 DEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDL 341 (519)
T ss_pred hHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecC
Confidence 8889999999999999988645578999999999999999999999999975
No 95
>KOG1446|consensus
Probab=99.16 E-value=6.1e-10 Score=100.55 Aligned_cols=111 Identities=13% Similarity=0.235 Sum_probs=95.5
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc---eeeeC--CCeEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY---VLSMD--SSVVK 95 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~---l~Ssd--d~~IK 95 (248)
.+.|+++.|+++|..+++++.|+ +++|||..+++.+.+. .+. ..|..++|.... +.|+. |.+||
T Consensus 14 ~~~i~sl~fs~~G~~litss~dD--------sl~LYd~~~g~~~~ti~skk--yG~~~~~Fth~~~~~i~sStk~d~tIr 83 (311)
T KOG1446|consen 14 NGKINSLDFSDDGLLLITSSEDD--------SLRLYDSLSGKQVKTINSKK--YGVDLACFTHHSNTVIHSSTKEDDTIR 83 (311)
T ss_pred CCceeEEEecCCCCEEEEecCCC--------eEEEEEcCCCceeeEeeccc--ccccEEEEecCCceEEEccCCCCCceE
Confidence 46899999999888788888887 8999999999988775 333 457888886553 55554 88999
Q ss_pred EEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 96 IWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 96 IWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
.-++.+.+.+..+.+ |...||+++.+|-+..+++++.|++|+.||+.
T Consensus 84 yLsl~dNkylRYF~G-H~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR 130 (311)
T KOG1446|consen 84 YLSLHDNKYLRYFPG-HKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLR 130 (311)
T ss_pred EEEeecCceEEEcCC-CCceEEEEEecCCCCeEEecccCCeEEeeEec
Confidence 999999999999998 79999999999999999999999999999986
No 96
>KOG0301|consensus
Probab=99.15 E-value=6.2e-10 Score=108.91 Aligned_cols=119 Identities=13% Similarity=0.220 Sum_probs=96.5
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEE-EcCCc--e
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIK-FHDNY--V 86 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~-F~~d~--l 86 (248)
.|+.+.+|.+| .+.|..+++-|+++ +++++.|+ .|++||+ ++..+... |+|..-|.++. +++++ +
T Consensus 168 ~~~~l~tf~gH-tD~VRgL~vl~~~~-flScsNDg--------~Ir~w~~-~ge~l~~~-~ghtn~vYsis~~~~~~~Iv 235 (745)
T KOG0301|consen 168 GGTLLKTFSGH-TDCVRGLAVLDDSH-FLSCSNDG--------SIRLWDL-DGEVLLEM-HGHTNFVYSISMALSDGLIV 235 (745)
T ss_pred CCchhhhhccc-hhheeeeEEecCCC-eEeecCCc--------eEEEEec-cCceeeee-eccceEEEEEEecCCCCeEE
Confidence 37888998886 89999999999655 66777774 8999999 66666554 56668999999 66666 4
Q ss_pred eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 87 LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.++.|+++|||+.. .+.+.|+- -...|.++++-+||. |++|+.||.|++|-...
T Consensus 236 s~gEDrtlriW~~~--e~~q~I~l-PttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~k 289 (745)
T KOG0301|consen 236 STGEDRTLRIWKKD--ECVQVITL-PTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVDK 289 (745)
T ss_pred EecCCceEEEeecC--ceEEEEec-CccceEEEEEeeCCC-EEEeccCceEEEEEecc
Confidence 45689999999987 89999985 135999999999987 56788899999998764
No 97
>KOG0269|consensus
Probab=99.15 E-value=1.3e-10 Score=114.59 Aligned_cols=124 Identities=14% Similarity=0.202 Sum_probs=95.5
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEe-cCCCCCCeeEEEEcCC
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVK-DHMYGLPIRDIKFHDN 84 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~-~h~~~~pI~sI~F~~d 84 (248)
|.++.+-..++.+. +..|.+|.|+|..+..|+++.|+ |.+++||||.+ ++...+ .|. +||.++.|||+
T Consensus 162 DlR~~~S~~t~~~n-SESiRDV~fsp~~~~~F~s~~ds-------G~lqlWDlRqp~r~~~k~~AH~--GpV~c~nwhPn 231 (839)
T KOG0269|consen 162 DLRSKKSKSTFRSN-SESIRDVKFSPGYGNKFASIHDS-------GYLQLWDLRQPDRCEKKLTAHN--GPVLCLNWHPN 231 (839)
T ss_pred eeeccccccccccc-chhhhceeeccCCCceEEEecCC-------ceEEEeeccCchhHHHHhhccc--CceEEEeecCC
Confidence 44444434444342 57899999999889999988887 69999999997 444433 454 99999999998
Q ss_pred c--eee-eCCCeEEEEECCCCC--EEEEeecCCCCCeeEEEEeCCC-CEEEEEe--CCCeEEEEEc
Q psy2083 85 Y--VLS-MDSSVVKIWSKDNGS--LFTCIESGDQTQFNNLCHIPES-GMMFIAN--ENKKILTYYI 142 (248)
Q Consensus 85 ~--l~S-sdd~~IKIWD~~tGk--~~~tie~~h~~~In~l~~~pds-gll~sa~--ed~~I~~w~I 142 (248)
. |++ +-|++|||||..+++ ...+++. .++++.|.|-|+- ..|++++ .|..|++|+|
T Consensus 232 r~~lATGGRDK~vkiWd~t~~~~~~~~tInT--iapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDv 295 (839)
T KOG0269|consen 232 REWLATGGRDKMVKIWDMTDSRAKPKHTINT--IAPVGRVKWRPARSYHLATCSMVVDTSVHVWDV 295 (839)
T ss_pred CceeeecCCCccEEEEeccCCCccceeEEee--cceeeeeeeccCccchhhhhhccccceEEEEee
Confidence 7 665 479999999998754 6678887 7999999999966 4455554 5789999986
No 98
>KOG1036|consensus
Probab=99.15 E-value=3.9e-10 Score=101.73 Aligned_cols=110 Identities=17% Similarity=0.179 Sum_probs=93.8
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEEC
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSK 99 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~ 99 (248)
++.|.++.|+|.++.|++++-|+ +++|||+-+......+.|+ .||.+++|.++. ++++-|+.||..|.
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDg--------slrlYdv~~~~l~~~~~~~--~plL~c~F~d~~~~~~G~~dg~vr~~Dl 82 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDG--------SLRLYDVPANSLKLKFKHG--APLLDCAFADESTIVTGGLDGQVRRYDL 82 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccC--------cEEEEeccchhhhhheecC--CceeeeeccCCceEEEeccCceEEEEEe
Confidence 57899999999888888888774 9999999988655556665 999999999976 55567999999999
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++|+.. .+.. |..+|++++.++..+.+++|+-|++|++|+..
T Consensus 83 n~~~~~-~igt-h~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R 124 (323)
T KOG1036|consen 83 NTGNED-QIGT-HDEGIRCIEYSYEVGCVISGSWDKTIKFWDPR 124 (323)
T ss_pred cCCcce-eecc-CCCceEEEEeeccCCeEEEcccCccEEEEecc
Confidence 988754 3444 58999999999999999999999999999854
No 99
>KOG0293|consensus
Probab=99.14 E-value=1.7e-10 Score=107.63 Aligned_cols=173 Identities=16% Similarity=0.268 Sum_probs=131.5
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLS 88 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~S 88 (248)
++..++.+| ...|.-+.|+||+.+++++|.+. .+.|||+.++.....+.++++..+.+++|.||+ |++
T Consensus 260 kl~~tlvgh-~~~V~yi~wSPDdryLlaCg~~e--------~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~G 330 (519)
T KOG0293|consen 260 KLKKTLVGH-SQPVSYIMWSPDDRYLLACGFDE--------VLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTG 330 (519)
T ss_pred eeeeeeecc-cCceEEEEECCCCCeEEecCchH--------heeeccCCcchhhhhcccCcCCCcceeEEccCCceeEec
Confidence 456677777 68899999999999999999987 699999999988888877778899999999998 667
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccc-hhhhhhcccc
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDN-LTEELEENII 167 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~-~tee~e~~~~ 167 (248)
+.|++|-.||.+ |+.+.++++-....|.++++.+||..+++.+.|++|.+|...+ .+|. +.+| |++.
T Consensus 331 s~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~---------~~dr~lise--~~~i 398 (519)
T KOG0293|consen 331 SPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREA---------RVDRGLISE--EQPI 398 (519)
T ss_pred CCCCcEEEecCC-cchhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhh---------hhhhccccc--cCce
Confidence 789999999988 8888888872234689999999999999999999999997543 2232 3332 2222
Q ss_pred --ccccCCc-eeecHhHHhhcCCccccCCCcccccce---eeee
Q psy2083 168 --ENVYDDY-KFVTRQELEDLGLGHLIGTSLLRAYMH---GFFM 205 (248)
Q Consensus 168 --~~~yd~y-~fvt~~~l~~l~~~~ligt~~l~~ymh---gyf~ 205 (248)
-++=.|- -+++.=+-+++-||.|----++|-||= |.|+
T Consensus 399 ts~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fi 442 (519)
T KOG0293|consen 399 TSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFI 442 (519)
T ss_pred eEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceE
Confidence 2333333 345555666677777666566777774 6664
No 100
>KOG0647|consensus
Probab=99.14 E-value=5.8e-10 Score=100.61 Aligned_cols=109 Identities=13% Similarity=0.265 Sum_probs=90.7
Q ss_pred CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eee-eCCCeE
Q psy2083 20 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLS-MDSSVV 94 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~S-sdd~~I 94 (248)
.|.+.|-++||+.|+..+|+++.|+ .+++|||.++++..+-.|. .||+.+.|-+.. |++ |-|++|
T Consensus 70 ~~~~PvL~v~WsddgskVf~g~~Dk--------~~k~wDL~S~Q~~~v~~Hd--~pvkt~~wv~~~~~~cl~TGSWDKTl 139 (347)
T KOG0647|consen 70 SHDGPVLDVCWSDDGSKVFSGGCDK--------QAKLWDLASGQVSQVAAHD--APVKTCHWVPGMNYQCLVTGSWDKTL 139 (347)
T ss_pred ccCCCeEEEEEccCCceEEeeccCC--------ceEEEEccCCCeeeeeecc--cceeEEEEecCCCcceeEecccccce
Confidence 3468999999999988888888886 8999999999888877776 999999998764 444 679999
Q ss_pred EEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 95 KIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 95 KIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
|.||.+..+++.+++- +..+-++.+ --.++++|..++.|.+|.+
T Consensus 140 KfWD~R~~~pv~t~~L--PeRvYa~Dv--~~pm~vVata~r~i~vynL 183 (347)
T KOG0647|consen 140 KFWDTRSSNPVATLQL--PERVYAADV--LYPMAVVATAERHIAVYNL 183 (347)
T ss_pred eecccCCCCeeeeeec--cceeeehhc--cCceeEEEecCCcEEEEEc
Confidence 9999999999999996 555543332 3468999999999999974
No 101
>KOG0308|consensus
Probab=99.14 E-value=2.4e-10 Score=111.23 Aligned_cols=122 Identities=9% Similarity=0.147 Sum_probs=96.3
Q ss_pred eeEEEecCCCCCeeEEEE-eCCCCcEEEeecCceeeeecCCeeEEEEcCCCce--eE--------EecCCCCCCeeEEEE
Q psy2083 13 LFTCIESGDQTQFNNLCH-IPESGMMFIANENKKILTYYIPAFYLYDIRADKP--LR--------VKDHMYGLPIRDIKF 81 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~-~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p--l~--------~~~h~~~~pI~sI~F 81 (248)
|..++..| .+.|.++++ .+++-..++||-|. .|.|||+.++.. +. ....++..+|.+++-
T Consensus 109 c~stir~H-~DYVkcla~~ak~~~lvaSgGLD~--------~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~ 179 (735)
T KOG0308|consen 109 CMSTIRTH-KDYVKCLAYIAKNNELVASGGLDR--------KIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAM 179 (735)
T ss_pred hHhhhhcc-cchheeeeecccCceeEEecCCCc--------cEEEEEccCcchhhhhhccccccccCCCCCccceeeeec
Confidence 55566665 789999998 55554444555554 899999998722 21 122255678999999
Q ss_pred cCCc--eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 82 HDNY--VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 82 ~~d~--l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++.+ ++++ -.+.+++||.++++-+..+.+ |...|+.+-.++||..+++|+.|++|++|++-+
T Consensus 180 N~t~t~ivsGgtek~lr~wDprt~~kimkLrG-HTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgq 244 (735)
T KOG0308|consen 180 NQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRG-HTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQ 244 (735)
T ss_pred CCcceEEEecCcccceEEeccccccceeeeec-cccceEEEEEcCCCCeEeecCCCceEEeeeccc
Confidence 9987 5554 588999999999999999998 799999999999999999999999999999643
No 102
>KOG0268|consensus
Probab=99.14 E-value=7e-11 Score=108.63 Aligned_cols=126 Identities=17% Similarity=0.306 Sum_probs=97.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-CceeEE-ecCCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-DKPLRV-KDHMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~pl~~-~~h~~~~pI~sI~F~~ 83 (248)
+|++++.+++.+--. -.-|++||.| .+..|++++++ ..+.+||+|. .+|+.+ ++|. ..|.+|.|+|
T Consensus 215 yD~R~~~Pl~KVi~~--mRTN~IswnP-eafnF~~a~ED-------~nlY~~DmR~l~~p~~v~~dhv--sAV~dVdfsp 282 (433)
T KOG0268|consen 215 YDLRQASPLKKVILT--MRTNTICWNP-EAFNFVAANED-------HNLYTYDMRNLSRPLNVHKDHV--SAVMDVDFSP 282 (433)
T ss_pred EecccCCccceeeee--ccccceecCc-cccceeecccc-------ccceehhhhhhcccchhhcccc--eeEEEeccCC
Confidence 567777777765432 3458999999 66766665554 2899999998 478887 4666 8999999999
Q ss_pred Cc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 84 NY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 84 d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
.+ +++|-|++|||+..+.|.--..+.......|.+|.++-|+.+|++||+|+.|++|-..
T Consensus 283 tG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~ 345 (433)
T KOG0268|consen 283 TGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAK 345 (433)
T ss_pred CcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecc
Confidence 98 5567899999999997754333332123578899999999999999999999999743
No 103
>KOG0270|consensus
Probab=99.13 E-value=8.8e-10 Score=103.30 Aligned_cols=127 Identities=14% Similarity=0.149 Sum_probs=103.5
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCc--ee-EEecCCCCCCeeEEEE
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADK--PL-RVKDHMYGLPIRDIKF 81 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~--pl-~~~~h~~~~pI~sI~F 81 (248)
-|..+|++.+++.+| .+.|.++.|+|.....+ +++-| |+|.|+|.|.+. +. +..+ ..|-.|+|
T Consensus 271 WD~~~g~p~~s~~~~-~k~Vq~l~wh~~~p~~LLsGs~D--------~~V~l~D~R~~~~s~~~wk~~----g~VEkv~w 337 (463)
T KOG0270|consen 271 WDVDTGKPKSSITHH-GKKVQTLEWHPYEPSVLLSGSYD--------GTVALKDCRDPSNSGKEWKFD----GEVEKVAW 337 (463)
T ss_pred EEcCCCCcceehhhc-CCceeEEEecCCCceEEEecccc--------ceEEeeeccCccccCceEEec----cceEEEEe
Confidence 477889999999965 79999999999776644 44444 499999999532 22 2222 57999999
Q ss_pred cCCc----eeeeCCCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCC
Q psy2083 82 HDNY----VLSMDSSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLG 146 (248)
Q Consensus 82 ~~d~----l~Ssdd~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG 146 (248)
+|.. +++.|||+|+-+|+++ |+++-++.. |..+|.++|+++.- +++.+++.|+.|++|.++.-.
T Consensus 338 ~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~A-Hd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~ 407 (463)
T KOG0270|consen 338 DPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKA-HDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDS 407 (463)
T ss_pred cCCCceeEEEecCCceEEeeecCCCCCceeEEEe-ccCCcceEEecCCCCcceeeccccceEEEEeecCCC
Confidence 9875 7778999999999997 699999999 69999999998855 899999999999999987533
No 104
>KOG0301|consensus
Probab=99.12 E-value=3.3e-10 Score=110.75 Aligned_cols=118 Identities=11% Similarity=0.247 Sum_probs=97.8
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS 88 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S 88 (248)
|++.-+.++| +..|+.++++|++ .+++||.|. +||||.- ++.+.++. +|..-|+.+++.++. +.+
T Consensus 130 ~~l~~~l~gH-~asVWAv~~l~e~-~~vTgsaDK--------tIklWk~--~~~l~tf~-gHtD~VRgL~vl~~~~flSc 196 (745)
T KOG0301|consen 130 GELVYSLQGH-TASVWAVASLPEN-TYVTGSADK--------TIKLWKG--GTLLKTFS-GHTDCVRGLAVLDDSHFLSC 196 (745)
T ss_pred hhhhcccCCc-chheeeeeecCCC-cEEeccCcc--------eeeeccC--Cchhhhhc-cchhheeeeEEecCCCeEee
Confidence 3444445665 8999999999976 677888886 9999986 45565542 344899999999995 556
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++|+.||+||. +|+++-...+ |.+-|-++...++++.|++++||+++++|..-
T Consensus 197 sNDg~Ir~w~~-~ge~l~~~~g-htn~vYsis~~~~~~~Ivs~gEDrtlriW~~~ 249 (745)
T KOG0301|consen 197 SNDGSIRLWDL-DGEVLLEMHG-HTNFVYSISMALSDGLIVSTGEDRTLRIWKKD 249 (745)
T ss_pred cCCceEEEEec-cCceeeeeec-cceEEEEEEecCCCCeEEEecCCceEEEeecC
Confidence 78999999999 6999999998 69999999999999999999999999999854
No 105
>KOG0305|consensus
Probab=99.12 E-value=1.5e-09 Score=104.36 Aligned_cols=127 Identities=10% Similarity=0.195 Sum_probs=105.6
Q ss_pred ceeEEEecCCCCCeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS 88 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S 88 (248)
.+...+..| .+.|-.++|.| ..|+|++||+. .|++|++||..+++.+...+.+ .-|.+|.|++.. +++
T Consensus 334 ~p~~~~~~H-~aAVKA~awcP~q~~lLAsGGGs------~D~~i~fwn~~~g~~i~~vdtg--sQVcsL~Wsk~~kEi~s 404 (484)
T KOG0305|consen 334 EPKFTFTEH-TAAVKALAWCPWQSGLLATGGGS------ADRCIKFWNTNTGARIDSVDTG--SQVCSLIWSKKYKELLS 404 (484)
T ss_pred cccEEEecc-ceeeeEeeeCCCccCceEEcCCC------cccEEEEEEcCCCcEecccccC--CceeeEEEcCCCCEEEE
Confidence 455555665 78999999988 45667776665 3789999999999998887766 789999999987 665
Q ss_pred e---CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 89 M---DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 89 s---dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
+ .+..|.||+.-+-+.+..+.+ |...|-.++++|||..|++|+.|.+++.|.+-...+.
T Consensus 405 thG~s~n~i~lw~~ps~~~~~~l~g-H~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~~~~ 466 (484)
T KOG0305|consen 405 THGYSENQITLWKYPSMKLVAELLG-HTSRVLYLALSPDGETIVTGAADETLRFWNLFDERPK 466 (484)
T ss_pred ecCCCCCcEEEEeccccceeeeecC-CcceeEEEEECCCCCEEEEecccCcEEeccccCCCCc
Confidence 4 367899999999999999998 7999999999999999999999999999987654333
No 106
>KOG1036|consensus
Probab=99.12 E-value=1e-09 Score=99.07 Aligned_cols=111 Identities=14% Similarity=0.235 Sum_probs=88.3
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWS 98 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD 98 (248)
..++.+++|.++. .+++++.|+ .|++||+.++.-...-.|. .+|.+|.+.+-. |+++-|++||+||
T Consensus 54 ~~plL~c~F~d~~-~~~~G~~dg--------~vr~~Dln~~~~~~igth~--~~i~ci~~~~~~~~vIsgsWD~~ik~wD 122 (323)
T KOG1036|consen 54 GAPLLDCAFADES-TIVTGGLDG--------QVRRYDLNTGNEDQIGTHD--EGIRCIEYSYEVGCVISGSWDKTIKFWD 122 (323)
T ss_pred CCceeeeeccCCc-eEEEeccCc--------eEEEEEecCCcceeeccCC--CceEEEEeeccCCeEEEcccCccEEEEe
Confidence 4688999988854 466777664 9999999999877776666 999999999643 5556899999999
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCC
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~ 147 (248)
.++-.+.-+++. ...|.++. -.|..|++|+.|.+|.+|+++.+..
T Consensus 123 ~R~~~~~~~~d~--~kkVy~~~--v~g~~LvVg~~~r~v~iyDLRn~~~ 167 (323)
T KOG1036|consen 123 PRNKVVVGTFDQ--GKKVYCMD--VSGNRLVVGTSDRKVLIYDLRNLDE 167 (323)
T ss_pred cccccccccccc--CceEEEEe--ccCCEEEEeecCceEEEEEcccccc
Confidence 997656666665 45777544 5688999999999999999988654
No 107
>KOG0318|consensus
Probab=99.11 E-value=1.1e-09 Score=104.54 Aligned_cols=124 Identities=12% Similarity=0.226 Sum_probs=98.0
Q ss_pred hcCceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEe--cCCCCCCeeEEEEcCCc
Q psy2083 9 DKGSLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVK--DHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 9 ~~G~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~--~h~~~~pI~sI~F~~d~ 85 (248)
++|.-.-.+.+| +..||++.|=|..-+ ++++|+|. +|-+|+ |-|+..+ ...|...|++|.|+||+
T Consensus 135 DSG~SvGei~Gh-Sr~ins~~~KpsRPfRi~T~sdDn--------~v~ffe---GPPFKFk~s~r~HskFV~~VRysPDG 202 (603)
T KOG0318|consen 135 DSGNSVGEITGH-SRRINSVDFKPSRPFRIATGSDDN--------TVAFFE---GPPFKFKSSFREHSKFVNCVRYSPDG 202 (603)
T ss_pred cCCCccceeecc-ceeEeeeeccCCCceEEEeccCCC--------eEEEee---CCCeeeeecccccccceeeEEECCCC
Confidence 355555566665 677777777776656 55555554 899886 6676543 22334789999999998
Q ss_pred ---eeeeCCCeEEEEECCCCCEEEEee---cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 86 ---VLSMDSSVVKIWSKDNGSLFTCIE---SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 86 ---l~Ssdd~~IKIWD~~tGk~~~tie---~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
+..+.|+.|-|+|-.+|+.+..|+ + |...|-.+.|+|||..+++++.|.++++|++...
T Consensus 203 ~~Fat~gsDgki~iyDGktge~vg~l~~~~a-HkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~ 267 (603)
T KOG0318|consen 203 SRFATAGSDGKIYIYDGKTGEKVGELEDSDA-HKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTN 267 (603)
T ss_pred CeEEEecCCccEEEEcCCCccEEEEecCCCC-ccccEEEEEECCCCceEEEecCCceEEEEEeecc
Confidence 444689999999999999999999 5 6899999999999999999999999999998764
No 108
>KOG0267|consensus
Probab=99.11 E-value=5.5e-11 Score=116.66 Aligned_cols=126 Identities=13% Similarity=0.209 Sum_probs=104.1
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~- 85 (248)
|...+++++++-+| ..++.++.|.|-+ ..+++|+.+ +.+++||+|...|..++.- |...|+.+.|+|++
T Consensus 98 DleeAk~vrtLtgh-~~~~~sv~f~P~~-~~~a~gStd-------td~~iwD~Rk~Gc~~~~~s-~~~vv~~l~lsP~Gr 167 (825)
T KOG0267|consen 98 DLEEAKIVRTLTGH-LLNITSVDFHPYG-EFFASGSTD-------TDLKIWDIRKKGCSHTYKS-HTRVVDVLRLSPDGR 167 (825)
T ss_pred ehhhhhhhhhhhcc-ccCcceeeeccce-EEecccccc-------ccceehhhhccCceeeecC-CcceeEEEeecCCCc
Confidence 34467788887776 7899999988854 444444433 4899999998778777643 44789999999999
Q ss_pred -eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 86 -VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 -l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+.+ ++|.+|||||...|+....|+. |...++++.|+|..-++.+|+.|++++.|++.
T Consensus 168 ~v~~g~ed~tvki~d~~agk~~~ef~~-~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dle 226 (825)
T KOG0267|consen 168 WVASGGEDNTVKIWDLTAGKLSKEFKS-HEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLE 226 (825)
T ss_pred eeeccCCcceeeeeccccccccccccc-ccccccccccCchhhhhccCCCCceeeeeccc
Confidence 444 5789999999999999999998 69999999999999999999999999999965
No 109
>KOG4378|consensus
Probab=99.09 E-value=8.9e-10 Score=104.82 Aligned_cols=130 Identities=14% Similarity=0.152 Sum_probs=104.2
Q ss_pred cchhcCceeEEEecCCCCCee-EEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFN-NLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~-~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
|+..++.--++|... ++.++ -+.|+|....+++..+|+ |+|.|||+....|+...+..|..|...|+|+|.
T Consensus 148 h~~~t~~~tt~f~~~-sgqsvRll~ys~skr~lL~~asd~-------G~VtlwDv~g~sp~~~~~~~HsAP~~gicfsps 219 (673)
T KOG4378|consen 148 HGTKTKQKTTTFTID-SGQSVRLLRYSPSKRFLLSIASDK-------GAVTLWDVQGMSPIFHASEAHSAPCRGICFSPS 219 (673)
T ss_pred EecccCccccceecC-CCCeEEEeecccccceeeEeeccC-------CeEEEEeccCCCcccchhhhccCCcCcceecCC
Confidence 344455555566654 46666 566677666666555554 599999999999998877777799999999998
Q ss_pred c---eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 85 Y---VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 85 ~---l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
. +++ +.|+.|-|||....+...++.- ..|...|+|.|+|.+|++|+..|+|..||+..+
T Consensus 220 ne~l~vsVG~Dkki~~yD~~s~~s~~~l~y--~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~ 282 (673)
T KOG4378|consen 220 NEALLVSVGYDKKINIYDIRSQASTDRLTY--SHPLSTVAFSECGTYLCAGNSKGELIAYDMRST 282 (673)
T ss_pred ccceEEEecccceEEEeecccccccceeee--cCCcceeeecCCceEEEeecCCceEEEEecccC
Confidence 6 444 5788899999998888888887 789999999999999999999999999999874
No 110
>KOG0306|consensus
Probab=99.09 E-value=4.9e-10 Score=110.54 Aligned_cols=208 Identities=15% Similarity=0.205 Sum_probs=141.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc-------eeEEecCC----CCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK-------PLRVKDHM----YGL 74 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~-------pl~~~~h~----~~~ 74 (248)
++..++.++.++..| .+.++++.-.||+...+++|.|. +|++||...-. .+....|. -..
T Consensus 439 fdlaS~~l~Eti~AH-dgaIWsi~~~pD~~g~vT~saDk--------tVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~d 509 (888)
T KOG0306|consen 439 FDLASASLVETIRAH-DGAIWSISLSPDNKGFVTGSADK--------TVKFWDFKLVVSVPGTQKKVLSLKHTRTLELED 509 (888)
T ss_pred EEeehhhhhhhhhcc-ccceeeeeecCCCCceEEecCCc--------EEEEEeEEEEeccCcccceeeeeccceEEeccc
Confidence 455566677777766 69999999999998899999997 99999975321 11111121 125
Q ss_pred CeeEEEEcCCc--eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCc
Q psy2083 75 PIRDIKFHDNY--VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKW 151 (248)
Q Consensus 75 pI~sI~F~~d~--l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~w 151 (248)
.|.+|+++||+ ++-+ -|++|||+-.++-+.+-++-+ |.-||.|+.++|||.+|++|+.|++|++|-+- +|.-.|
T Consensus 510 dvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYG-HkLPV~smDIS~DSklivTgSADKnVKiWGLd-FGDCHK- 586 (888)
T KOG0306|consen 510 DVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYG-HKLPVLSMDISPDSKLIVTGSADKNVKIWGLD-FGDCHK- 586 (888)
T ss_pred cEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecc-cccceeEEeccCCcCeEEeccCCCceEEeccc-cchhhh-
Confidence 69999999998 3334 699999999999999999999 79999999999999999999999999999542 232110
Q ss_pred cccc---cchhhhhhccccccccCCceeecHhHHhhcCCc---------cccC-CCcccccce---e-eeech------h
Q psy2083 152 CGFL---DNLTEELEENIIENVYDDYKFVTRQELEDLGLG---------HLIG-TSLLRAYMH---G-FFMDI------R 208 (248)
Q Consensus 152 cs~l---d~~tee~e~~~~~~~yd~y~fvt~~~l~~l~~~---------~lig-t~~l~~ymh---g-yf~~~------~ 208 (248)
||. |+++. ...+.+++.|-|-.-.....-| +|=| .+-+++-|- | |.+.. |
T Consensus 587 -S~fAHdDSvm~------V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIR 659 (888)
T KOG0306|consen 587 -SFFAHDDSVMS------VQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIR 659 (888)
T ss_pred -hhhcccCceeE------EEEcccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeE
Confidence 222 44443 4566677778774433333222 2333 223333333 3 55543 4
Q ss_pred hHHHHhhhcCChhhHHHHHHHHHHHHH
Q psy2083 209 LYRKAKSVSAPFEFEEFKKKKIRERIE 235 (248)
Q Consensus 209 ly~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (248)
||.+-+ ++.-+||.|+..-.|..|
T Consensus 660 lwE~td---e~~~lEeekE~ErEe~yE 683 (888)
T KOG0306|consen 660 LWERTD---EILILEEEKEGEREEEYE 683 (888)
T ss_pred eeeccC---cceeeehhhhhhhHHHHH
Confidence 555443 355678877776665555
No 111
>KOG0973|consensus
Probab=99.09 E-value=9.8e-10 Score=111.45 Aligned_cols=146 Identities=10% Similarity=0.220 Sum_probs=111.9
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC--Cc----------------eeE
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA--DK----------------PLR 66 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs--~~----------------pl~ 66 (248)
|.|..--+.+.+...| .+.|+++.|+||+.++++||+|. .|.+|+-.. +. .+.
T Consensus 53 ~~~~~l~k~l~~m~~h-~~sv~CVR~S~dG~~lAsGSDD~--------~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~ 123 (942)
T KOG0973|consen 53 EKNENLPKHLCTMDDH-DGSVNCVRFSPDGSYLASGSDDR--------LVMIWERAEIGSGTVFGSTGGAKNVESWKVVS 123 (942)
T ss_pred hhhcccchhheeeccc-cCceeEEEECCCCCeEeeccCcc--------eEEEeeecccCCcccccccccccccceeeEEE
Confidence 3444445667777776 68898888999877777766664 899999772 11 112
Q ss_pred EecCCCCCCeeEEEEcCCc--eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 67 VKDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 67 ~~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+. -+|...|.+|+|+|+. ++| +-|++|-|||..+++.++.+++ |...|-.+.|.|-|.+|++=++|++|++|.+.
T Consensus 124 ~l-~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~-H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~ 201 (942)
T KOG0973|consen 124 IL-RGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRG-HQSLVKGVSWDPIGKYFASQSDDRTLKVWRTS 201 (942)
T ss_pred EE-ecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeec-ccccccceEECCccCeeeeecCCceEEEEEcc
Confidence 22 2445889999999997 444 5799999999999999999999 79999999999999999999999999999977
Q ss_pred CCCCCCCccccccchhhhhhccccc
Q psy2083 144 SLGPAPKWCGFLDNLTEELEENIIE 168 (248)
Q Consensus 144 ~lG~aP~wcs~ld~~tee~e~~~~~ 168 (248)
..|.. -.||+-.||...+
T Consensus 202 dw~i~-------k~It~pf~~~~~~ 219 (942)
T KOG0973|consen 202 DWGIE-------KSITKPFEESPLT 219 (942)
T ss_pred cceee-------EeeccchhhCCCc
Confidence 64443 3566666665433
No 112
>KOG0973|consensus
Probab=99.08 E-value=1.3e-09 Score=110.57 Aligned_cols=122 Identities=9% Similarity=0.266 Sum_probs=96.5
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc--e
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY--V 86 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~--l 86 (248)
+=+++..+.+| .+.|.+++++|++.+++++|-|. +|-|||.++.+.+.+ .+|. ..|+.|.|.|-+ +
T Consensus 118 ~wk~~~~l~~H-~~DV~Dv~Wsp~~~~lvS~s~Dn--------sViiwn~~tF~~~~vl~~H~--s~VKGvs~DP~Gky~ 186 (942)
T KOG0973|consen 118 SWKVVSILRGH-DSDVLDVNWSPDDSLLVSVSLDN--------SVIIWNAKTFELLKVLRGHQ--SLVKGVSWDPIGKYF 186 (942)
T ss_pred eeeEEEEEecC-CCccceeccCCCccEEEEecccc--------eEEEEccccceeeeeeeccc--ccccceEECCccCee
Confidence 33466666675 79999999999999898988887 999999999966655 4665 999999999998 6
Q ss_pred ee-eCCCeEEEEECCCCCEEEEeec---------------------------------------------------CCCC
Q psy2083 87 LS-MDSSVVKIWSKDNGSLFTCIES---------------------------------------------------GDQT 114 (248)
Q Consensus 87 ~S-sdd~~IKIWD~~tGk~~~tie~---------------------------------------------------~h~~ 114 (248)
+| +||++||||+..+....+++.. +|.+
T Consensus 187 ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~ 266 (942)
T KOG0973|consen 187 ASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSA 266 (942)
T ss_pred eeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCC
Confidence 65 6999999999765333333211 3788
Q ss_pred CeeEEEEeC-----CCC------------EEEEEeCCCeEEEEEc
Q psy2083 115 QFNNLCHIP-----ESG------------MMFIANENKKILTYYI 142 (248)
Q Consensus 115 ~In~l~~~p-----dsg------------ll~sa~ed~~I~~w~I 142 (248)
++.++.|+| +-+ .+++|+.|+.|.+|--
T Consensus 267 p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T 311 (942)
T KOG0973|consen 267 PVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNT 311 (942)
T ss_pred ceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEec
Confidence 999999986 112 7899999999999975
No 113
>KOG0288|consensus
Probab=99.08 E-value=1.3e-09 Score=101.61 Aligned_cols=124 Identities=10% Similarity=0.147 Sum_probs=94.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
-|+.++.|..++-.. +.+++++..+ ..+++|- +|++||+||+|++.++....-+ +.|+++..+.++
T Consensus 288 WDl~k~~C~kt~l~~--S~cnDI~~~~---~~~~SgH-------~DkkvRfwD~Rs~~~~~sv~~g--g~vtSl~ls~~g 353 (459)
T KOG0288|consen 288 WDLQKAYCSKTVLPG--SQCNDIVCSI---SDVISGH-------FDKKVRFWDIRSADKTRSVPLG--GRVTSLDLSMDG 353 (459)
T ss_pred hhhhhhheecccccc--ccccceEecc---eeeeecc-------cccceEEEeccCCceeeEeecC--cceeeEeeccCC
Confidence 355667777775554 5667777652 2333322 3459999999999988876544 689999999997
Q ss_pred --ee-eeCCCeEEEEECCCCCEEEEeecC---CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 86 --VL-SMDSSVVKIWSKDNGSLFTCIESG---DQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 --l~-Ssdd~~IKIWD~~tGk~~~tie~~---h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
|+ ++-|.++++.|.++.+..+++... ..++.+-++|+|++.++++|+.|+.|++|.+-
T Consensus 354 ~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~ 417 (459)
T KOG0288|consen 354 LELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVF 417 (459)
T ss_pred eEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEcc
Confidence 55 457899999999998888877641 13578899999999999999999999999864
No 114
>KOG2445|consensus
Probab=99.08 E-value=3.1e-09 Score=96.17 Aligned_cols=133 Identities=16% Similarity=0.232 Sum_probs=99.3
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeE-----EecCCCCCCeeEEEEcCCc----
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLR-----VKDHMYGLPIRDIKFHDNY---- 85 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~-----~~~h~~~~pI~sI~F~~d~---- 85 (248)
++|..+|.+-|+++.|.+-|..++++++|. +|++||.+++.-.+ .+.|. ..|..|.|-+..
T Consensus 6 ~pi~s~h~DlihdVs~D~~GRRmAtCSsDq--------~vkI~d~~~~s~~W~~Ts~Wrah~--~Si~rV~WAhPEfGqv 75 (361)
T KOG2445|consen 6 APIDSGHKDLIHDVSFDFYGRRMATCSSDQ--------TVKIWDSTSDSGTWSCTSSWRAHD--GSIWRVVWAHPEFGQV 75 (361)
T ss_pred cccccCCcceeeeeeecccCceeeeccCCC--------cEEEEeccCCCCceEEeeeEEecC--CcEEEEEecCccccce
Confidence 456777777788888877676677777775 99999998763322 24555 899999996542
Q ss_pred eee-eCCCeEEEEECCC------C---CEEEEeecCCCCCeeEEEEeC--CCCEEEEEeCCCeEEEEEcCCCCCCCCccc
Q psy2083 86 VLS-MDSSVVKIWSKDN------G---SLFTCIESGDQTQFNNLCHIP--ESGMMFIANENKKILTYYIPSLGPAPKWCG 153 (248)
Q Consensus 86 l~S-sdd~~IKIWD~~t------G---k~~~tie~~h~~~In~l~~~p--dsgll~sa~ed~~I~~w~Ip~lG~aP~wcs 153 (248)
|++ |-|++++||.... | ...+++.. ..+.|.+++|.| -|=+|++++.||.+++|..|..+..-.|-
T Consensus 76 vA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~D-srssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~- 153 (361)
T KOG2445|consen 76 VATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVD-SRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWT- 153 (361)
T ss_pred EEEEecCCceeeeeecccccccccceeEEEEEeec-CCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccch-
Confidence 444 5799999999731 2 23455554 268999999999 45567888999999999999999999996
Q ss_pred cccchhhhhh
Q psy2083 154 FLDNLTEELE 163 (248)
Q Consensus 154 ~ld~~tee~e 163 (248)
|+-|+.
T Consensus 154 ----Lq~Ei~ 159 (361)
T KOG2445|consen 154 ----LQHEIQ 159 (361)
T ss_pred ----hhhhhh
Confidence 555555
No 115
>KOG0299|consensus
Probab=99.07 E-value=3.2e-10 Score=106.55 Aligned_cols=150 Identities=15% Similarity=0.238 Sum_probs=119.6
Q ss_pred CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc---eeeeCCCeEE
Q psy2083 20 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY---VLSMDSSVVK 95 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~---l~Ssdd~~IK 95 (248)
.|...+.+++.+||+.++++++-|. .|.|||.++..++.+ ++|. .+|.+++|-... .++|-|++||
T Consensus 200 ~h~keil~~avS~Dgkylatgg~d~--------~v~Iw~~~t~ehv~~~~ghr--~~V~~L~fr~gt~~lys~s~Drsvk 269 (479)
T KOG0299|consen 200 GHVKEILTLAVSSDGKYLATGGRDR--------HVQIWDCDTLEHVKVFKGHR--GAVSSLAFRKGTSELYSASADRSVK 269 (479)
T ss_pred cccceeEEEEEcCCCcEEEecCCCc--------eEEEecCcccchhhcccccc--cceeeeeeecCccceeeeecCCceE
Confidence 4578999999999999999988886 899999999999988 5565 899999998654 5567899999
Q ss_pred EEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC----CCCCCccccccchhhhhhcccccccc
Q psy2083 96 IWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL----GPAPKWCGFLDNLTEELEENIIENVY 171 (248)
Q Consensus 96 IWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l----G~aP~wcs~ld~~tee~e~~~~~~~y 171 (248)
+|+.+.-..+.++-+ |+..|.++....-..++-+|+.|+++++|.||.= -.++ |+++|. -..-
T Consensus 270 vw~~~~~s~vetlyG-Hqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~eesqlifrg~--~~sidc----------v~~I 336 (479)
T KOG0299|consen 270 VWSIDQLSYVETLYG-HQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEESQLIFRGG--EGSIDC----------VAFI 336 (479)
T ss_pred EEehhHhHHHHHHhC-CccceeeechhcccceEEeccccceeEEEeccccceeeeeCC--CCCeee----------EEEe
Confidence 999998777888887 6999999888888888888889999999999752 0111 333332 2346
Q ss_pred CCceeecHhHHhhcCCccccC
Q psy2083 172 DDYKFVTRQELEDLGLGHLIG 192 (248)
Q Consensus 172 d~y~fvt~~~l~~l~~~~lig 192 (248)
++..|||=++.-.+.||.+.-
T Consensus 337 n~~HfvsGSdnG~IaLWs~~K 357 (479)
T KOG0299|consen 337 NDEHFVSGSDNGSIALWSLLK 357 (479)
T ss_pred cccceeeccCCceEEEeeecc
Confidence 778899888877777776443
No 116
>KOG2096|consensus
Probab=99.07 E-value=1.5e-09 Score=98.72 Aligned_cols=111 Identities=15% Similarity=0.289 Sum_probs=82.4
Q ss_pred EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-----ceeE---EecCCCCCCeeEEEEcC-----
Q psy2083 17 IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-----KPLR---VKDHMYGLPIRDIKFHD----- 83 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-----~pl~---~~~h~~~~pI~sI~F~~----- 83 (248)
+.+| .+.|+++||++|+..++++++|. +|+|||+|.- +.+. ..+|. +.|.|.|
T Consensus 82 LKgH-~~~vt~~~FsSdGK~lat~~~Dr--------~Ir~w~~~DF~~~eHr~~R~nve~dhp-----T~V~FapDc~s~ 147 (420)
T KOG2096|consen 82 LKGH-KKEVTDVAFSSDGKKLATISGDR--------SIRLWDVRDFENKEHRCIRQNVEYDHP-----TRVVFAPDCKSV 147 (420)
T ss_pred hhcc-CCceeeeEEcCCCceeEEEeCCc--------eEEEEecchhhhhhhhHhhccccCCCc-----eEEEECCCcceE
Confidence 4454 79999999999998899998885 9999999863 1111 11221 1222221
Q ss_pred --------------------------------------------------Cc--eee-eCCCeEEEEECCCCCEEEEeec
Q psy2083 84 --------------------------------------------------NY--VLS-MDSSVVKIWSKDNGSLFTCIES 110 (248)
Q Consensus 84 --------------------------------------------------d~--l~S-sdd~~IKIWD~~tGk~~~tie~ 110 (248)
+. |+| +.|..|-|||.+ |+++.++..
T Consensus 148 vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idt 226 (420)
T KOG2096|consen 148 VVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDT 226 (420)
T ss_pred EEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeecc
Confidence 11 555 468889999998 888776532
Q ss_pred -------------------------------------------------CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 111 -------------------------------------------------GDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 111 -------------------------------------------------~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+|++.|..+||+|+|..+++++.||++++|+
T Consensus 227 nq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwd 306 (420)
T KOG2096|consen 227 NQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWD 306 (420)
T ss_pred ccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEee
Confidence 3788999999999999999999999999998
Q ss_pred c
Q psy2083 142 I 142 (248)
Q Consensus 142 I 142 (248)
+
T Consensus 307 t 307 (420)
T KOG2096|consen 307 T 307 (420)
T ss_pred c
Confidence 6
No 117
>KOG2055|consensus
Probab=99.07 E-value=1.9e-09 Score=101.58 Aligned_cols=128 Identities=14% Similarity=0.241 Sum_probs=93.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d 84 (248)
|-++++..++++.-. +.|..++|++++..++++|+++ .|.+||+|....+..+ +.+ +.-=++++-+++
T Consensus 330 LhakT~eli~s~Kie--G~v~~~~fsSdsk~l~~~~~~G--------eV~v~nl~~~~~~~rf~D~G-~v~gts~~~S~n 398 (514)
T KOG2055|consen 330 LHAKTKELITSFKIE--GVVSDFTFSSDSKELLASGGTG--------EVYVWNLRQNSCLHRFVDDG-SVHGTSLCISLN 398 (514)
T ss_pred ehhhhhhhhheeeec--cEEeeEEEecCCcEEEEEcCCc--------eEEEEecCCcceEEEEeecC-ccceeeeeecCC
Confidence 456788899998874 7899999999998888888885 8999999999887765 322 112256666666
Q ss_pred c--ee-eeCCCeEEEEECCC------CCEEEE----------eecC----------------------------------
Q psy2083 85 Y--VL-SMDSSVVKIWSKDN------GSLFTC----------IESG---------------------------------- 111 (248)
Q Consensus 85 ~--l~-Ssdd~~IKIWD~~t------Gk~~~t----------ie~~---------------------------------- 111 (248)
+ ++ +|+.|+|.|||.++ -+++.+ ++-+
T Consensus 399 g~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~ 478 (514)
T KOG2055|consen 399 GSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTS 478 (514)
T ss_pred CceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCC
Confidence 6 44 46899999999653 122211 1100
Q ss_pred --CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 112 --DQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 112 --h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.-.-++|++|+|+||+|++|++++++.+|-+..
T Consensus 479 n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~h 513 (514)
T KOG2055|consen 479 NTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLHH 513 (514)
T ss_pred CCcccceEEEEecCCCceEEeecCCCceeeEeecc
Confidence 023579999999999999999999999997643
No 118
>KOG0306|consensus
Probab=99.06 E-value=7.8e-10 Score=109.11 Aligned_cols=120 Identities=10% Similarity=0.161 Sum_probs=102.2
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLS 88 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~S 88 (248)
+.+-++=+| .-+|.+...+||+.+++++|.|. .|++|-+.=|.+-... +.|+..|.+|.|.|.. ..+
T Consensus 541 KFflsLYGH-kLPV~smDIS~DSklivTgSADK--------nVKiWGLdFGDCHKS~-fAHdDSvm~V~F~P~~~~FFt~ 610 (888)
T KOG0306|consen 541 KFFLSLYGH-KLPVLSMDISPDSKLIVTGSADK--------NVKIWGLDFGDCHKSF-FAHDDSVMSVQFLPKTHLFFTC 610 (888)
T ss_pred eeeeeeccc-ccceeEEeccCCcCeEEeccCCC--------ceEEeccccchhhhhh-hcccCceeEEEEcccceeEEEe
Confidence 334444454 78999999999999999999887 8999999888664442 3445899999999986 556
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+-|+.||-||.++-+.+.++.+ |...|.+++++|+|+++++++-|..|++|.-
T Consensus 611 gKD~kvKqWDg~kFe~iq~L~~-H~~ev~cLav~~~G~~vvs~shD~sIRlwE~ 663 (888)
T KOG0306|consen 611 GKDGKVKQWDGEKFEEIQKLDG-HHSEVWCLAVSPNGSFVVSSSHDKSIRLWER 663 (888)
T ss_pred cCcceEEeechhhhhhheeecc-chheeeeeEEcCCCCeEEeccCCceeEeeec
Confidence 6899999999999999999999 6999999999999999999999999999963
No 119
>KOG0288|consensus
Probab=99.06 E-value=1.8e-09 Score=100.64 Aligned_cols=125 Identities=12% Similarity=0.156 Sum_probs=100.6
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe---cCCCCCCeeEEEEc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK---DHMYGLPIRDIKFH 82 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~---~h~~~~pI~sI~F~ 82 (248)
.|.+++.+..+.+.+ +.|+++.-++++-.+.+++.|+ ++.+.|+|+..-...+ ....+..++.+.|+
T Consensus 327 wD~Rs~~~~~sv~~g--g~vtSl~ls~~g~~lLsssRDd--------tl~viDlRt~eI~~~~sA~g~k~asDwtrvvfS 396 (459)
T KOG0288|consen 327 WDIRSADKTRSVPLG--GRVTSLDLSMDGLELLSSSRDD--------TLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFS 396 (459)
T ss_pred EeccCCceeeEeecC--cceeeEeeccCCeEEeeecCCC--------ceeeeecccccEEEEeeccccccccccceeEEC
Confidence 356788888888887 6899999888776688888887 9999999997433332 11223458999999
Q ss_pred CCc---eeeeCCCeEEEEECCCCCEEEEeecCCCC-CeeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 83 DNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQT-QFNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 83 ~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~-~In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
|++ +++|.|+.|+||+..+||+...+...+.. .|++++|+|-|..+++++.+..+.+|
T Consensus 397 pd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 397 PDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred CCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence 998 44568999999999999999888753233 69999999999999999999999988
No 120
>KOG1007|consensus
Probab=99.05 E-value=7.2e-10 Score=99.70 Aligned_cols=118 Identities=14% Similarity=0.261 Sum_probs=91.2
Q ss_pred CCeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eee-eCCCeEEEE
Q psy2083 23 TQFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLS-MDSSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~S-sdd~~IKIW 97 (248)
...++-.++| -+|..+++.++. ++.-||+|+-+........|+.-|.++.|+|+. +++ +||+.||||
T Consensus 171 ~~ftsg~WspHHdgnqv~tt~d~--------tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriW 242 (370)
T KOG1007|consen 171 HSFTSGAWSPHHDGNQVATTSDS--------TLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIW 242 (370)
T ss_pred ceecccccCCCCccceEEEeCCC--------cEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEE
Confidence 3455566666 345555444443 899999999876655444455889999999997 444 589999999
Q ss_pred ECCC-CCEEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCCCCCCC
Q psy2083 98 SKDN-GSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPSLGPAP 149 (248)
Q Consensus 98 D~~t-Gk~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~lG~aP 149 (248)
|.++ ..+++++.+ |...|.+|.|+| ...+|++++.|..|.+|...+....|
T Consensus 243 D~R~tk~pv~el~~-HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~ 295 (370)
T KOG1007|consen 243 DTRKTKFPVQELPG-HSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQ 295 (370)
T ss_pred eccCCCccccccCC-CceEEEEEEecCccceEEEecCCCceeEEEecccccccc
Confidence 9986 458889988 799999999999 56899999999999999877665444
No 121
>KOG1407|consensus
Probab=99.03 E-value=3.5e-09 Score=94.12 Aligned_cols=163 Identities=12% Similarity=0.133 Sum_probs=122.7
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|.++|++++.++.. +.=+.++++|+++++++++-|+ .|-..|.|..+++...... ..++.++|+-+.
T Consensus 92 wd~r~~k~~~~i~~~--~eni~i~wsp~g~~~~~~~kdD--------~it~id~r~~~~~~~~~~~--~e~ne~~w~~~n 159 (313)
T KOG1407|consen 92 WDIRSGKCTARIETK--GENINITWSPDGEYIAVGNKDD--------RITFIDARTYKIVNEEQFK--FEVNEISWNNSN 159 (313)
T ss_pred EEeccCcEEEEeecc--CcceEEEEcCCCCEEEEecCcc--------cEEEEEecccceeehhccc--ceeeeeeecCCC
Confidence 467889999998875 3445788899999888888888 7999999999887766544 678999998655
Q ss_pred ---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhh
Q psy2083 86 ---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEEL 162 (248)
Q Consensus 86 ---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~ 162 (248)
+++..-|+|.|-..-.=+++++|+. |++.--++.|+|+|.++++|+.|..+.+||+..|-..- =-+.| ||
T Consensus 160 d~Fflt~GlG~v~ILsypsLkpv~si~A-H~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R-~isRl-----dw 232 (313)
T KOG1407|consen 160 DLFFLTNGLGCVEILSYPSLKPVQSIKA-HPSNCICIEFDPDGRYFATGSADALVSLWDVDELICER-CISRL-----DW 232 (313)
T ss_pred CEEEEecCCceEEEEecccccccccccc-CCcceEEEEECCCCceEeeccccceeeccChhHhhhhe-eeccc-----cC
Confidence 6677789999988888899999999 68777778899999999999999999999987764321 00111 12
Q ss_pred hccccccccCCceeecHhHHhhcCC
Q psy2083 163 EENIIENVYDDYKFVTRQELEDLGL 187 (248)
Q Consensus 163 e~~~~~~~yd~y~fvt~~~l~~l~~ 187 (248)
--.+..+-||+-...+-+|..-+.+
T Consensus 233 pVRTlSFS~dg~~lASaSEDh~IDI 257 (313)
T KOG1407|consen 233 PVRTLSFSHDGRMLASASEDHFIDI 257 (313)
T ss_pred ceEEEEeccCcceeeccCccceEEe
Confidence 2224455577666666665554444
No 122
>KOG1034|consensus
Probab=99.02 E-value=1.2e-09 Score=99.44 Aligned_cols=90 Identities=14% Similarity=0.257 Sum_probs=78.2
Q ss_pred CeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc---eee-eCCCeEEEEECCCCCEEEEeec--CCCCCeeEEEEeCC
Q psy2083 52 PAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY---VLS-MDSSVVKIWSKDNGSLFTCIES--GDQTQFNNLCHIPE 124 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~---l~S-sdd~~IKIWD~~tGk~~~tie~--~h~~~In~l~~~pd 124 (248)
|.|++.|+-+++.... ..|+ ..|+.|.|+|+. |+| |.|.+||+||++++.++..|-+ +|...|.++.|+++
T Consensus 115 GvIrVid~~~~~~~~~~~ghG--~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~ 192 (385)
T KOG1034|consen 115 GVIRVIDVVSGQCSKNYRGHG--GSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLD 192 (385)
T ss_pred eEEEEEecchhhhccceeccC--ccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCC
Confidence 5899999999876544 3554 899999999986 444 6799999999999999988754 37899999999999
Q ss_pred CCEEEEEeCCCeEEEEEcC
Q psy2083 125 SGMMFIANENKKILTYYIP 143 (248)
Q Consensus 125 sgll~sa~ed~~I~~w~Ip 143 (248)
|..|++++.|-.+++|.++
T Consensus 193 gd~i~ScGmDhslk~W~l~ 211 (385)
T KOG1034|consen 193 GDRIASCGMDHSLKLWRLN 211 (385)
T ss_pred CCeeeccCCcceEEEEecC
Confidence 9999999999999999987
No 123
>KOG1407|consensus
Probab=99.02 E-value=3.7e-09 Score=94.02 Aligned_cols=120 Identities=12% Similarity=0.163 Sum_probs=96.4
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee-
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS- 88 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S- 88 (248)
+.+.+|..| .++-.++.|.|+|.++++|+.|. .|.|||+..=-++.... ..+-||+.|+|+.|+ |+|
T Consensus 180 kpv~si~AH-~snCicI~f~p~GryfA~GsADA--------lvSLWD~~ELiC~R~is-RldwpVRTlSFS~dg~~lASa 249 (313)
T KOG1407|consen 180 KPVQSIKAH-PSNCICIEFDPDGRYFATGSADA--------LVSLWDVDELICERCIS-RLDWPVRTLSFSHDGRMLASA 249 (313)
T ss_pred ccccccccC-CcceEEEEECCCCceEeeccccc--------eeeccChhHhhhheeec-cccCceEEEEeccCcceeecc
Confidence 456667776 56777888899988888888886 89999997744444432 334899999999998 555
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC---------CeEEEEEcC
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN---------KKILTYYIP 143 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed---------~~I~~w~Ip 143 (248)
|.|..|-|=+.+||..+..+.- .++.+.|+|+|...+|+-|++| +.+++|-.|
T Consensus 250 SEDh~IDIA~vetGd~~~eI~~--~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiFG~~ 311 (313)
T KOG1407|consen 250 SEDHFIDIAEVETGDRVWEIPC--EGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIFGLS 311 (313)
T ss_pred CccceEEeEecccCCeEEEeec--cCCceeEEecCCCceeeEEecCCCCccccccceeEEecCC
Confidence 5799999999999999999986 8999999999999999999876 356666443
No 124
>KOG1274|consensus
Probab=99.01 E-value=4.1e-09 Score=105.78 Aligned_cols=129 Identities=14% Similarity=0.223 Sum_probs=102.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-----ecC--CCCCCeeE
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-----KDH--MYGLPIRD 78 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-----~~h--~~~~pI~s 78 (248)
++...+.+...+.+| .+.|..+.|+|.+..|++++.+ |+|++||+.++....+ ++- ....++..
T Consensus 123 ~~~~D~s~~~~lrgh-~apVl~l~~~p~~~fLAvss~d--------G~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~ 193 (933)
T KOG1274|consen 123 LNLDDSSQEKVLRGH-DAPVLQLSYDPKGNFLAVSSCD--------GKVQIWDLQDGILSKTLTGVDKDNEFILSRICTR 193 (933)
T ss_pred Eeccccchheeeccc-CCceeeeeEcCCCCEEEEEecC--------ceEEEEEcccchhhhhcccCCccccccccceeee
Confidence 455666677777776 6999999999987767776666 4999999999854332 211 11346788
Q ss_pred EEEcCCc---eeeeCCCeEEEEECCCCCEEEEeecCCC-CCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 79 IKFHDNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQ-TQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 79 I~F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~-~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++|||++ ++-+-|+.||++++.++...-.+.+++. +.++++.|+|+|.+|+++.-+++|.+|++-
T Consensus 194 ~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~ 262 (933)
T KOG1274|consen 194 LAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVD 262 (933)
T ss_pred eeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecc
Confidence 9999996 5567899999999999998888876433 459999999999999999999999999976
No 125
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.98 E-value=3.6e-08 Score=85.70 Aligned_cols=125 Identities=16% Similarity=0.354 Sum_probs=98.2
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeec-CceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---e
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---V 86 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~-d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l 86 (248)
+.....+..| ...|..+.|.|++..+++++. + +.+++||++.++++..... |..+|.++.|+|++ +
T Consensus 145 ~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~ 214 (466)
T COG2319 145 GKLIRTLEGH-SESVTSLAFSPDGKLLASGSSLD--------GTIKLWDLRTGKPLSTLAG-HTDPVSSLAFSPDGGLLI 214 (466)
T ss_pred CeEEEEEecC-cccEEEEEECCCCCEEEecCCCC--------CceEEEEcCCCceEEeecc-CCCceEEEEEcCCcceEE
Confidence 4566666665 688888999998776666654 4 4999999999777766532 45899999999886 5
Q ss_pred ee-eCCCeEEEEECCCCCEEE-EeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCC
Q psy2083 87 LS-MDSSVVKIWSKDNGSLFT-CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 87 ~S-sdd~~IKIWD~~tGk~~~-tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~ 147 (248)
++ +.|+.|++||..++..+. .+.. |.... ..+|+|++.++++++.|+.+++|++.....
T Consensus 215 ~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 275 (466)
T COG2319 215 ASGSSDGTIRLWDLSTGKLLRSTLSG-HSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS 275 (466)
T ss_pred EEecCCCcEEEEECCCCcEEeeecCC-CCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCc
Confidence 55 679999999999888888 5776 45553 238999999999999999999999987655
No 126
>KOG2110|consensus
Probab=98.98 E-value=1.3e-08 Score=93.78 Aligned_cols=130 Identities=14% Similarity=0.275 Sum_probs=98.5
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEe-C--CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHI-P--ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFH 82 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~-~--~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~ 82 (248)
+|.+..+++.+|+.. ..+...+|.+ + .+.+++--++-. .|.|.|||+-+-+|+.... .|..+|-+++|+
T Consensus 111 ydI~~MklLhTI~t~-~~n~~gl~AlS~n~~n~ylAyp~s~t------~GdV~l~d~~nl~~v~~I~-aH~~~lAalafs 182 (391)
T KOG2110|consen 111 YDIKDMKLLHTIETT-PPNPKGLCALSPNNANCYLAYPGSTT------SGDVVLFDTINLQPVNTIN-AHKGPLAALAFS 182 (391)
T ss_pred Eecccceeehhhhcc-CCCccceEeeccCCCCceEEecCCCC------CceEEEEEcccceeeeEEE-ecCCceeEEEEC
Confidence 467778888888765 2444544443 3 333555443332 4799999999988887763 556999999999
Q ss_pred CCc--eeee-CCC-eEEEEECCCCCEEEEeecC-CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 83 DNY--VLSM-DSS-VVKIWSKDNGSLFTCIESG-DQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 83 ~d~--l~Ss-dd~-~IKIWD~~tGk~~~tie~~-h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+++ ++++ +.| +||++.+.+|+.+..|.-+ ....|-+++|+||+.+|.+.++.++|++|-+.
T Consensus 183 ~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~ 248 (391)
T KOG2110|consen 183 PDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLE 248 (391)
T ss_pred CCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEec
Confidence 998 6654 555 6999999999999988742 12467799999999999999999999999864
No 127
>KOG0639|consensus
Probab=98.97 E-value=1.6e-09 Score=103.34 Aligned_cols=180 Identities=13% Similarity=0.182 Sum_probs=126.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC-CCCCCeeEEEEcCCc---eeeeCCCeEEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH-MYGLPIRDIKFHDNY---VLSMDSSVVKIWS 98 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h-~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD 98 (248)
..+.+|.-+||+..|+++|... +|.||||.++.|-....- ..+.....++.+||. .+++.|+.|.|||
T Consensus 466 nyiRSckL~pdgrtLivGGeas--------tlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwD 537 (705)
T KOG0639|consen 466 NYIRSCKLLPDGRTLIVGGEAS--------TLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWD 537 (705)
T ss_pred cceeeeEecCCCceEEeccccc--------eeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEE
Confidence 4677888899888899988865 999999999877443211 112356678889987 5567899999999
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC---------------CCCCCCccccccchhhhhh
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS---------------LGPAPKWCGFLDNLTEELE 163 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~---------------lG~aP~wcs~ld~~tee~e 163 (248)
+.+...+..|++ |+....|+.+++||.-|.+|+-|.+|+.||+.. ||--| .=|=|.--||
T Consensus 538 Lhnq~~VrqfqG-htDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP----~~dWlavGMe 612 (705)
T KOG0639|consen 538 LHNQTLVRQFQG-HTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCP----TGDWLAVGME 612 (705)
T ss_pred cccceeeecccC-CCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhhhheecccCC----Cccceeeecc
Confidence 999999999999 799999999999999999999999999999543 33222 2222222333
Q ss_pred ccccccccCCceeecHhHHhhcCCccccCCCcccccceeeeechhhHHHHhhhcCCh
Q psy2083 164 ENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPF 220 (248)
Q Consensus 164 ~~~~~~~yd~y~fvt~~~l~~l~~~~ligt~~l~~ymhgyf~~~~ly~~~~~~~~~~ 220 (248)
.. +-.---+|+.|--.|++.+-.=-++=.+|--.+|+..-..|-+-+...|+
T Consensus 613 ns-----~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPy 664 (705)
T KOG0639|consen 613 NS-----NVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY 664 (705)
T ss_pred cC-----cEEEEecCCccceeecccccEEEEEEecccCceeeecCchhhhhhccCcc
Confidence 21 11112234444444555442222455667778888888888777777665
No 128
>KOG1445|consensus
Probab=98.97 E-value=1.8e-09 Score=105.21 Aligned_cols=108 Identities=17% Similarity=0.327 Sum_probs=88.8
Q ss_pred CCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCC---cee----EE-ecCCCCCCeeEEEEcCCc----eeee
Q psy2083 23 TQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRAD---KPL----RV-KDHMYGLPIRDIKFHDNY----VLSM 89 (248)
Q Consensus 23 ~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~---~pl----~~-~~h~~~~pI~sI~F~~d~----l~Ss 89 (248)
..|+++.+.|-+-. |+.+++|+ .|+||-+..+ ++. .+ ..| +..|.++.|||=. ++++
T Consensus 628 t~vtDl~WdPFD~~rLAVa~ddg--------~i~lWr~~a~gl~e~~~tPe~~lt~h--~eKI~slRfHPLAadvLa~as 697 (1012)
T KOG1445|consen 628 TLVTDLHWDPFDDERLAVATDDG--------QINLWRLTANGLPENEMTPEKILTIH--GEKITSLRFHPLAADVLAVAS 697 (1012)
T ss_pred ceeeecccCCCChHHeeecccCc--------eEEEEEeccCCCCcccCCcceeeecc--cceEEEEEecchhhhHhhhhh
Confidence 47888888875444 76766664 8999999875 222 22 344 4899999999953 3446
Q ss_pred CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 90 DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 90 dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
.|-+|+|||+.+++....+.+ |...|-+++|+|||..+++.|.|++|.+|.
T Consensus 698 yd~Ti~lWDl~~~~~~~~l~g-HtdqIf~~AWSpdGr~~AtVcKDg~~rVy~ 748 (1012)
T KOG1445|consen 698 YDSTIELWDLANAKLYSRLVG-HTDQIFGIAWSPDGRRIATVCKDGTLRVYE 748 (1012)
T ss_pred ccceeeeeehhhhhhhheecc-CcCceeEEEECCCCcceeeeecCceEEEeC
Confidence 789999999999999999998 799999999999999999999999999996
No 129
>KOG1310|consensus
Probab=98.96 E-value=2.3e-09 Score=103.03 Aligned_cols=135 Identities=17% Similarity=0.230 Sum_probs=104.9
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eee-e
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLS-M 89 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~S-s 89 (248)
+.+.+| ++.||++.+..+|.+|+++++|. .+-+||.-..|+++..+.+|...|-++.|.|.. |+| +
T Consensus 44 ~eL~GH-~GCVN~LeWn~dG~lL~SGSDD~--------r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgA 114 (758)
T KOG1310|consen 44 AELTGH-TGCVNCLEWNADGELLASGSDDT--------RLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGA 114 (758)
T ss_pred hhhccc-cceecceeecCCCCEEeecCCcc--------eEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEecc
Confidence 345565 89999999999877777766665 799999998899998877888999999999974 554 5
Q ss_pred CCCeEEEEECCCCC----------EEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCCCCCccccccch
Q psy2083 90 DSSVVKIWSKDNGS----------LFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGPAPKWCGFLDNL 158 (248)
Q Consensus 90 dd~~IKIWD~~tGk----------~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~ 158 (248)
.|+-||++|+...+ ....+.- |...|..++..|++ ..+.+|+|||+|+.|||.. |.=|..-+.+
T Consensus 115 gDk~i~lfdl~~~~~~~~d~~~~~~~~~~~c-ht~rVKria~~p~~PhtfwsasEDGtirQyDiRE----ph~c~p~~~~ 189 (758)
T KOG1310|consen 115 GDKLIKLFDLDSSKEGGMDHGMEETTRCWSC-HTDRVKRIATAPNGPHTFWSASEDGTIRQYDIRE----PHVCNPDEDC 189 (758)
T ss_pred CcceEEEEecccccccccccCccchhhhhhh-hhhhhhheecCCCCCceEEEecCCcceeeecccC----CccCCccccc
Confidence 79999999998521 1222222 56778888889999 9999999999999999974 5567666655
Q ss_pred hhhhh
Q psy2083 159 TEELE 163 (248)
Q Consensus 159 tee~e 163 (248)
..+|-
T Consensus 190 ~~~l~ 194 (758)
T KOG1310|consen 190 PSILV 194 (758)
T ss_pred cHHHH
Confidence 55554
No 130
>KOG1445|consensus
Probab=98.95 E-value=2.4e-09 Score=104.37 Aligned_cols=118 Identities=9% Similarity=0.113 Sum_probs=96.8
Q ss_pred EEecCCCCCeeEEEEeCC-CCcEEEeecCceeeeecCCeeEEEEcCCC------ceeEEecCCCCCCeeEEEEcCCc---
Q psy2083 16 CIESGDQTQFNNLCHIPE-SGMMFIANENKKILTYYIPAFYLYDIRAD------KPLRVKDHMYGLPIRDIKFHDNY--- 85 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~-~g~l~~ag~d~~~~~~~~G~V~LwDlRs~------~pl~~~~h~~~~pI~sI~F~~d~--- 85 (248)
-+.. |.+.|+++.|+|- +++|++++.|. .|+||-|-.+ .|-....|+ +.+|-++.|||..
T Consensus 74 ~l~~-H~d~VtDl~FspF~D~LLAT~S~D~--------~VKiW~lp~g~~q~LSape~~~g~~-~~~vE~l~fHpTaDgi 143 (1012)
T KOG1445|consen 74 ILAA-HGDQVTDLGFSPFADELLATCSRDE--------PVKIWKLPRGHSQKLSAPEIDVGGG-NVIVECLRFHPTADGI 143 (1012)
T ss_pred eeec-ccceeeccCccccchhhhhcccCCC--------eeEEEecCCCcccccCCcceeecCC-ceEEEEeecccCcCce
Confidence 3444 4789999999984 56677777776 8999999744 233345555 3688999999964
Q ss_pred eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++..++++|||+.+++....+.+ |..-|.++.|+.||.+|++++.|++|.+||=.+
T Consensus 144 l~s~a~g~v~i~D~stqk~~~el~~-h~d~vQSa~WseDG~llatscKdkqirifDPRa 201 (1012)
T KOG1445|consen 144 LASGAHGSVYITDISTQKTAVELSG-HTDKVQSADWSEDGKLLATSCKDKQIRIFDPRA 201 (1012)
T ss_pred EEeccCceEEEEEcccCceeecccC-CchhhhccccccCCceEeeecCCcceEEeCCcc
Confidence 6677899999999999999999998 699999999999999999999999999998544
No 131
>KOG0270|consensus
Probab=98.95 E-value=4.2e-09 Score=98.81 Aligned_cols=162 Identities=15% Similarity=0.195 Sum_probs=111.3
Q ss_pred cCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eeeeCCCe
Q psy2083 19 SGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLSMDSSV 93 (248)
Q Consensus 19 ~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~Ssdd~~ 93 (248)
.+|.+.|-.+.+.-.-.. |+++|.|. ||+|||+.+++|..+..| |+.+|.+++|||.. |.+|-|++
T Consensus 240 ~gHTdavl~Ls~n~~~~nVLaSgsaD~--------TV~lWD~~~g~p~~s~~~-~~k~Vq~l~wh~~~p~~LLsGs~D~~ 310 (463)
T KOG0270|consen 240 SGHTDAVLALSWNRNFRNVLASGSADK--------TVKLWDVDTGKPKSSITH-HGKKVQTLEWHPYEPSVLLSGSYDGT 310 (463)
T ss_pred ccchHHHHHHHhccccceeEEecCCCc--------eEEEEEcCCCCcceehhh-cCCceeEEEecCCCceEEEeccccce
Confidence 456777877777655444 66666665 999999999999888764 35899999999975 44568999
Q ss_pred EEEEECCC-CCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhcccccccc
Q psy2083 94 VKIWSKDN-GSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVY 171 (248)
Q Consensus 94 IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~~~~y 171 (248)
|++.|.+. +..-..+.. .+.|-.++|.|.+ ..++++.+||+++-+++.+.| -|-|- |..=-+|..- -.-..-
T Consensus 311 V~l~D~R~~~~s~~~wk~--~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~-~~vwt--~~AHd~~ISg-l~~n~~ 384 (463)
T KOG0270|consen 311 VALKDCRDPSNSGKEWKF--DGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPG-KPVWT--LKAHDDEISG-LSVNIQ 384 (463)
T ss_pred EEeeeccCccccCceEEe--ccceEEEEecCCCceeEEEecCCceEEeeecCCCC-CceeE--EEeccCCcce-EEecCC
Confidence 99999983 222223444 5678889999988 456677799999999999988 66675 1110010000 000112
Q ss_pred CCceeecHhHHhhcCCccccCCCc
Q psy2083 172 DDYKFVTRQELEDLGLGHLIGTSL 195 (248)
Q Consensus 172 d~y~fvt~~~l~~l~~~~ligt~~ 195 (248)
--+-.+|-...+.+.||.+-+++-
T Consensus 385 ~p~~l~t~s~d~~Vklw~~~~~~~ 408 (463)
T KOG0270|consen 385 TPGLLSTASTDKVVKLWKFDVDSP 408 (463)
T ss_pred CCcceeeccccceEEEEeecCCCC
Confidence 245566777788888888777643
No 132
>KOG1272|consensus
Probab=98.94 E-value=1.2e-09 Score=103.25 Aligned_cols=206 Identities=18% Similarity=0.252 Sum_probs=138.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d 84 (248)
+|-.+|++++.|-.+ .+.+...+-.|-+..+-++.+. |+|.||--.+..||.. .-|. .||++|+++++
T Consensus 236 ~DVS~GklVa~~~t~-~G~~~vm~qNP~NaVih~Ghsn--------GtVSlWSP~skePLvKiLcH~--g~V~siAv~~~ 304 (545)
T KOG1272|consen 236 QDVSTGKLVASIRTG-AGRTDVMKQNPYNAVIHLGHSN--------GTVSLWSPNSKEPLVKILCHR--GPVSSIAVDRG 304 (545)
T ss_pred EeechhhhhHHHHcc-CCccchhhcCCccceEEEcCCC--------ceEEecCCCCcchHHHHHhcC--CCcceEEECCC
Confidence 466789998888776 5777778888877766566555 4999999999999765 3454 99999999999
Q ss_pred c---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhh
Q psy2083 85 Y---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEE 161 (248)
Q Consensus 85 ~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee 161 (248)
+ +.++-|+.|||||+++-..+.++.. +.+.+.++||.-| +++++....+.+|-= .++..| |...-=+..-
T Consensus 305 G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t--p~~a~~ls~Sqkg--lLA~~~G~~v~iw~d-~~~~s~--~~~~pYm~H~ 377 (545)
T KOG1272|consen 305 GRYMATTGLDRKVKIWDLRNFYQLHTYRT--PHPASNLSLSQKG--LLALSYGDHVQIWKD-ALKGSG--HGETPYMNHR 377 (545)
T ss_pred CcEEeecccccceeEeeeccccccceeec--CCCcccccccccc--ceeeecCCeeeeehh-hhcCCC--CCCcchhhhc
Confidence 8 5556899999999999888888876 6788888887554 456777889999941 111112 2111111111
Q ss_pred hhccccccccCCceeecHhHHhhcCCccccC-CCcccccceeeeechhhHHHHhhhcCChhhHHHHH-HHHHHHHHHHhh
Q psy2083 162 LEENIIENVYDDYKFVTRQELEDLGLGHLIG-TSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKK-KKIRERIEQERT 239 (248)
Q Consensus 162 ~e~~~~~~~yd~y~fvt~~~l~~l~~~~lig-t~~l~~ymhgyf~~~~ly~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 239 (248)
....-.+-.|+.-+++ ||+.|.-| ||+|-|=-= -.-|+ -.-.|||.=...|| +.|+.-||+-+.
T Consensus 378 -----~~~~V~~l~FcP~EDv--LGIGH~~G~tsilVPGsG-----ePN~D--s~e~nPfetrKQRqE~EVr~LLeKipp 443 (545)
T KOG1272|consen 378 -----CGGPVEDLRFCPYEDV--LGIGHAGGITSILVPGSG-----EPNYD--SLEDNPFETRKQRQEKEVRSLLEKIPP 443 (545)
T ss_pred -----cCcccccceeccHHHe--eeccccCCceeEeccCCC-----CCCcc--hhccCcchhhhHHhHHHHHHHHhhCCh
Confidence 1124567889998876 78888888 666644211 00111 12367886666655 446766776655
Q ss_pred cCcc
Q psy2083 240 RGVQ 243 (248)
Q Consensus 240 ~r~~ 243 (248)
.=|+
T Consensus 444 ElIs 447 (545)
T KOG1272|consen 444 ELIS 447 (545)
T ss_pred HhEE
Confidence 5444
No 133
>KOG0302|consensus
Probab=98.92 E-value=7e-09 Score=95.95 Aligned_cols=128 Identities=8% Similarity=0.099 Sum_probs=94.9
Q ss_pred cCceeEEEecCCCCCeeEEEEeCC-CCcEEEeecCceeeeecCCeeEEEEcCCCceeEE--ecCCCCCCeeEEEEcCCc-
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPE-SGMMFIANENKKILTYYIPAFYLYDIRADKPLRV--KDHMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~-~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~--~~h~~~~pI~sI~F~~d~- 85 (248)
..+.+-++.+| .+.=..++|+|- .|.++++--- +.|.+|...++....- ..-+|...|-.++|+|..
T Consensus 200 ~~~Pl~t~~gh-k~EGy~LdWSp~~~g~LlsGDc~--------~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~ 270 (440)
T KOG0302|consen 200 EFRPLFTFNGH-KGEGYGLDWSPIKTGRLLSGDCV--------KGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTED 270 (440)
T ss_pred ccCceEEeccc-CccceeeecccccccccccCccc--------cceEeeeeccCceeecCccccccccchhhhccCCccC
Confidence 34577777776 577789999983 3334443222 3799999988743221 112345889999999975
Q ss_pred --eee-eCCCeEEEEECCCCC---EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 86 --VLS-MDSSVVKIWSKDNGS---LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 86 --l~S-sdd~~IKIWD~~tGk---~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
++| |-|++|||||++.+. ++.+ .. |.++||-+.|+-+-++|++|++||++++|++.++-+.
T Consensus 271 ~vfaScS~DgsIrIWDiRs~~~~~~~~~-kA-h~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~ 337 (440)
T KOG0302|consen 271 GVFASCSCDGSIRIWDIRSGPKKAAVST-KA-HNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSG 337 (440)
T ss_pred ceEEeeecCceEEEEEecCCCccceeEe-ec-cCCceeeEEccCCcceeeecCCCceEEEEEhhhccCC
Confidence 444 469999999999983 3333 55 6899999999998889999999999999999988543
No 134
>KOG4328|consensus
Probab=98.91 E-value=5.1e-09 Score=98.62 Aligned_cols=108 Identities=17% Similarity=0.297 Sum_probs=81.5
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE--ecCCCCCCeeEEEEcCCc---ee-eeCCCeEEEE
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV--KDHMYGLPIRDIKFHDNY---VL-SMDSSVVKIW 97 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~--~~h~~~~pI~sI~F~~d~---l~-Ssdd~~IKIW 97 (248)
...++.|+.+++.++.++.-+ -.-+||+|+++.-.. .-|. ..|++|+++|-. ++ ++.|++.|||
T Consensus 281 ~fs~~d~~~e~~~vl~~~~~G--------~f~~iD~R~~~s~~~~~~lh~--kKI~sv~~NP~~p~~laT~s~D~T~kIW 350 (498)
T KOG4328|consen 281 WFSSLDFSAESRSVLFGDNVG--------NFNVIDLRTDGSEYENLRLHK--KKITSVALNPVCPWFLATASLDQTAKIW 350 (498)
T ss_pred eeeeccccCCCccEEEeeccc--------ceEEEEeecCCccchhhhhhh--cccceeecCCCCchheeecccCcceeee
Confidence 344555566677766665553 789999999854222 2344 689999999975 44 4689999999
Q ss_pred ECCC--CCE---EEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 98 SKDN--GSL---FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 98 D~~t--Gk~---~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
|.+. ++. +.++ + |...|++++|+|.||.|++.+.|..|++|+..
T Consensus 351 D~R~l~~K~sp~lst~-~-HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss 399 (498)
T KOG4328|consen 351 DLRQLRGKASPFLSTL-P-HRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSS 399 (498)
T ss_pred ehhhhcCCCCcceecc-c-ccceeeeeEEcCCCCceEeeccCCceEEeecc
Confidence 9986 332 3343 3 58999999999999999999999999999974
No 135
>KOG1539|consensus
Probab=98.91 E-value=6.3e-09 Score=103.69 Aligned_cols=115 Identities=17% Similarity=0.279 Sum_probs=95.6
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc--ee-e
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY--VL-S 88 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~--l~-S 88 (248)
.+.++.-+ ..++...++..+++++++.++- .|+++|+-+.+-+..+ +|+ ..|++.+|+||+ |+ +
T Consensus 527 l~~~l~l~--~~~~~iv~hr~s~l~a~~~ddf--------~I~vvD~~t~kvvR~f~gh~--nritd~~FS~DgrWlisa 594 (910)
T KOG1539|consen 527 LKKSLRLG--SSITGIVYHRVSDLLAIALDDF--------SIRVVDVVTRKVVREFWGHG--NRITDMTFSPDGRWLISA 594 (910)
T ss_pred eeeeeccC--CCcceeeeeehhhhhhhhcCce--------eEEEEEchhhhhhHHhhccc--cceeeeEeCCCCcEEEEe
Confidence 34444433 3577888888888888888886 7999999998766654 455 889999999998 54 5
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC-CeEEEEE
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN-KKILTYY 141 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed-~~I~~w~ 141 (248)
+.|++||+||+-+|.++-.+-. ..+..++.|+|+|.+|+++..| .-|.+|-
T Consensus 595 smD~tIr~wDlpt~~lID~~~v--d~~~~sls~SPngD~LAT~Hvd~~gIylWs 646 (910)
T KOG1539|consen 595 SMDSTIRTWDLPTGTLIDGLLV--DSPCTSLSFSPNGDFLATVHVDQNGIYLWS 646 (910)
T ss_pred ecCCcEEEEeccCcceeeeEec--CCcceeeEECCCCCEEEEEEecCceEEEEE
Confidence 6799999999999999999988 7899999999999999999988 6788885
No 136
>KOG0290|consensus
Probab=98.90 E-value=1.9e-08 Score=90.76 Aligned_cols=123 Identities=14% Similarity=0.239 Sum_probs=94.6
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCc-eeEEecC-CCCCCeeEEEEcCCc---ee-
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADK-PLRVKDH-MYGLPIRDIKFHDNY---VL- 87 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~-pl~~~~h-~~~~pI~sI~F~~d~---l~- 87 (248)
+-+=.| ...|.+++|...+..+| ++|.| |.||+||||+-. ...++.. ....|...++|++.. ++
T Consensus 190 TQLIAH-DKEV~DIaf~~~s~~~FASvgaD--------GSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymAT 260 (364)
T KOG0290|consen 190 TQLIAH-DKEVYDIAFLKGSRDVFASVGAD--------GSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMAT 260 (364)
T ss_pred eEEEec-CcceeEEEeccCccceEEEecCC--------CcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhh
Confidence 333344 48899999998655565 55555 499999999853 3444432 225688999998765 33
Q ss_pred -eeCCCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCC
Q psy2083 88 -SMDSSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 88 -Ssdd~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~ 147 (248)
..|+.-|-|-|++. +.++..++. |.+.||.++|.|.+ .-|.+|++|.++.+|++++...
T Consensus 261 f~~dS~~V~iLDiR~P~tpva~L~~-H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~ 322 (364)
T KOG0290|consen 261 FAMDSNKVVILDIRVPCTPVARLRN-HQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPR 322 (364)
T ss_pred hhcCCceEEEEEecCCCcceehhhc-CcccccceEecCCCCceeeecCCcceEEEEecccccc
Confidence 35788888999986 778999998 79999999999977 6799999999999999988544
No 137
>KOG1273|consensus
Probab=98.90 E-value=1.6e-08 Score=92.05 Aligned_cols=119 Identities=11% Similarity=0.257 Sum_probs=95.4
Q ss_pred EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC-----------
Q psy2083 16 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN----------- 84 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d----------- 84 (248)
.+.+ |.-.|.++|++++|..|++++.|. .|++||+++|.|+...-.. .||..+.|||.
T Consensus 60 ~lsa-H~~pi~sl~WS~dgr~LltsS~D~--------si~lwDl~~gs~l~rirf~--spv~~~q~hp~k~n~~va~~~~ 128 (405)
T KOG1273|consen 60 MLSA-HVRPITSLCWSRDGRKLLTSSRDW--------SIKLWDLLKGSPLKRIRFD--SPVWGAQWHPRKRNKCVATIME 128 (405)
T ss_pred hhhc-cccceeEEEecCCCCEeeeecCCc--------eeEEEeccCCCceeEEEcc--CccceeeeccccCCeEEEEEec
Confidence 3444 478999999999999999999997 8999999999988765333 78888888771
Q ss_pred ------------------------------------c--eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC
Q psy2083 85 ------------------------------------Y--VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES 125 (248)
Q Consensus 85 ------------------------------------~--l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds 125 (248)
+ |+++ .+|-+-++|.+|-++++++.-.....|.++.|+-.|
T Consensus 129 ~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g 208 (405)
T KOG1273|consen 129 ESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKG 208 (405)
T ss_pred CCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccC
Confidence 1 3333 467788889888888888875212689999999999
Q ss_pred CEEEEEeCCCeEEEEEcCCC
Q psy2083 126 GMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 126 gll~sa~ed~~I~~w~Ip~l 145 (248)
..|++-+.|+.|++|++..|
T Consensus 209 ~~liiNtsDRvIR~ye~~di 228 (405)
T KOG1273|consen 209 RFLIINTSDRVIRTYEISDI 228 (405)
T ss_pred cEEEEecCCceEEEEehhhh
Confidence 99999999999999998753
No 138
>KOG0646|consensus
Probab=98.89 E-value=9.3e-09 Score=96.97 Aligned_cols=112 Identities=13% Similarity=0.197 Sum_probs=87.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEEC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWSK 99 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~ 99 (248)
+.|..++.+|.+-++++++.. |.+.||.+.+|+.+.++. .|=.+|+++.|+.|+ +.++.|+-|.+|++
T Consensus 82 g~v~al~s~n~G~~l~ag~i~--------g~lYlWelssG~LL~v~~-aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l 152 (476)
T KOG0646|consen 82 GPVHALASSNLGYFLLAGTIS--------GNLYLWELSSGILLNVLS-AHYQSITCLKFSDDGSHIITGSKDGAVLVWLL 152 (476)
T ss_pred cceeeeecCCCceEEEeeccc--------CcEEEEEeccccHHHHHH-hhccceeEEEEeCCCcEEEecCCCccEEEEEE
Confidence 467777777754444444344 489999999999888773 333799999999998 44568999999986
Q ss_pred C---------CCCEEEEeecCCCCCeeEEEEeCCC--CEEEEEeCCCeEEEEEcCC
Q psy2083 100 D---------NGSLFTCIESGDQTQFNNLCHIPES--GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 100 ~---------tGk~~~tie~~h~~~In~l~~~pds--gll~sa~ed~~I~~w~Ip~ 144 (248)
. +-+++..+.. |.-+|+++...+.| ..|+++++|.++++|++..
T Consensus 153 ~~lv~a~~~~~~~p~~~f~~-HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~ 207 (476)
T KOG0646|consen 153 TDLVSADNDHSVKPLHIFSD-HTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSL 207 (476)
T ss_pred EeecccccCCCccceeeecc-CcceeEEEEecCCCccceEEEecCCceEEEEEecc
Confidence 4 2467778887 79999999998764 7899999999999999743
No 139
>KOG4283|consensus
Probab=98.88 E-value=2e-08 Score=90.78 Aligned_cols=115 Identities=10% Similarity=0.113 Sum_probs=88.8
Q ss_pred CCCCCeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-----eeee-CCC
Q psy2083 20 GDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-----VLSM-DSS 92 (248)
Q Consensus 20 ~~~~~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-----l~Ss-dd~ 92 (248)
+|.=.|.++.++| |.|+..+++-|. ++|+||..+-+....+... ..|.+-+++|=. |+.+ ++-
T Consensus 99 ~Hky~iss~~WyP~DtGmFtssSFDh--------tlKVWDtnTlQ~a~~F~me--~~VYshamSp~a~sHcLiA~gtr~~ 168 (397)
T KOG4283|consen 99 GHKYAISSAIWYPIDTGMFTSSSFDH--------TLKVWDTNTLQEAVDFKME--GKVYSHAMSPMAMSHCLIAAGTRDV 168 (397)
T ss_pred cceeeeeeeEEeeecCceeecccccc--------eEEEeecccceeeEEeecC--ceeehhhcChhhhcceEEEEecCCC
Confidence 3455789999998 455544444454 9999999997655544322 567777777642 4444 678
Q ss_pred eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC-EEEEEeCCCeEEEEEcCCC
Q psy2083 93 VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPSL 145 (248)
Q Consensus 93 ~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg-ll~sa~ed~~I~~w~Ip~l 145 (248)
.|++-|+.+|..-+++.+ |...|-.|.|+|.+. .|++|+.|+.|++|||.-.
T Consensus 169 ~VrLCDi~SGs~sH~LsG-Hr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRra 221 (397)
T KOG4283|consen 169 QVRLCDIASGSFSHTLSG-HRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRA 221 (397)
T ss_pred cEEEEeccCCcceeeecc-ccCceEEEEeccCceeEEEecCCCceEEEEEeecc
Confidence 999999999999999999 799999999999885 4678899999999999764
No 140
>KOG0268|consensus
Probab=98.88 E-value=4.5e-09 Score=96.88 Aligned_cols=121 Identities=12% Similarity=0.195 Sum_probs=94.7
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---ee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VL 87 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~ 87 (248)
..++++.-+ .+.|.++.|.|--..++ ++++|. .|-|||+|.+.|+...... ..-|+|+|+|.. ++
T Consensus 178 ~Pv~smswG-~Dti~svkfNpvETsILas~~sDr--------sIvLyD~R~~~Pl~KVi~~--mRTN~IswnPeafnF~~ 246 (433)
T KOG0268|consen 178 NPVSSMSWG-ADSISSVKFNPVETSILASCASDR--------SIVLYDLRQASPLKKVILT--MRTNTICWNPEAFNFVA 246 (433)
T ss_pred CccceeecC-CCceeEEecCCCcchheeeeccCC--------ceEEEecccCCccceeeee--ccccceecCccccceee
Confidence 355555554 57888999988655544 444554 8999999999998765333 456999999965 55
Q ss_pred eeCCCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 88 SMDSSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 88 Ssdd~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++.|..+-.+|.+. ..++....+ |.+.|.+|.|+|-|..+++|+-|.+|++|-+..
T Consensus 247 a~ED~nlY~~DmR~l~~p~~v~~d-hvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~ 303 (433)
T KOG0268|consen 247 ANEDHNLYTYDMRNLSRPLNVHKD-HVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNH 303 (433)
T ss_pred ccccccceehhhhhhcccchhhcc-cceeEEEeccCCCcchhccccccceEEEeecCC
Confidence 56799999999986 456667776 689999999999999999999999999997543
No 141
>KOG0307|consensus
Probab=98.86 E-value=2.6e-09 Score=109.06 Aligned_cols=120 Identities=17% Similarity=0.339 Sum_probs=91.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc----eeee-CCC--eE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY----VLSM-DSS--VV 94 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~----l~Ss-dd~--~I 94 (248)
+.|..+.+...-..+++++++. |.+.+||||..+|+... +|....-+..|+|||+. ++++ ||+ +|
T Consensus 162 ~eI~~lsWNrkvqhILAS~s~s-------g~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~Pvi 234 (1049)
T KOG0307|consen 162 SEIKCLSWNRKVSHILASGSPS-------GRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVI 234 (1049)
T ss_pred ccceEeccchhhhHHhhccCCC-------CCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCcee
Confidence 3566666665555655555543 58999999999998764 66644568899999996 4444 444 89
Q ss_pred EEEECCC-CCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCC---CCCCCC
Q psy2083 95 KIWSKDN-GSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPS---LGPAPK 150 (248)
Q Consensus 95 KIWD~~t-Gk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~---lG~aP~ 150 (248)
.+||.+. ..++..+++ |...|.++.|++.+ .+|++++.|++|..|..-. ||..|.
T Consensus 235 qlWDlR~assP~k~~~~-H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~ 294 (1049)
T KOG0307|consen 235 QLWDLRFASSPLKILEG-HQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPA 294 (1049)
T ss_pred EeecccccCCchhhhcc-cccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCC
Confidence 9999775 567888887 79999999999966 9999999999999998654 556665
No 142
>KOG4283|consensus
Probab=98.85 E-value=2e-08 Score=90.83 Aligned_cols=91 Identities=15% Similarity=0.228 Sum_probs=69.1
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCC-------------
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHM------------- 71 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~------------- 71 (248)
-|+.+|.+-.++.+| .++|-.+.++|.+.++++.|+-+ |.|||||||.. .++.+.|..
T Consensus 173 CDi~SGs~sH~LsGH-r~~vlaV~Wsp~~e~vLatgsaD-------g~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~a 244 (397)
T KOG4283|consen 173 CDIASGSFSHTLSGH-RDGVLAVEWSPSSEWVLATGSAD-------GAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTA 244 (397)
T ss_pred EeccCCcceeeeccc-cCceEEEEeccCceeEEEecCCC-------ceEEEEEeecccceeEEeecccCccCcccccccc
Confidence 477899999999987 79999999999999855444433 49999999975 455554322
Q ss_pred CCCCeeEEEEcCCc---eeeeCCCeEEEEECCCCCE
Q psy2083 72 YGLPIRDIKFHDNY---VLSMDSSVVKIWSKDNGSL 104 (248)
Q Consensus 72 ~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~ 104 (248)
|...|+.++|..++ ...+-|..+++|+..+|+.
T Consensus 245 h~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~n 280 (397)
T KOG4283|consen 245 HYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRN 280 (397)
T ss_pred ccceeeeeeecccchhhhhccCccceEEeecccCcc
Confidence 23578889999887 4445677899999988764
No 143
>KOG0299|consensus
Probab=98.85 E-value=2.5e-08 Score=94.04 Aligned_cols=122 Identities=16% Similarity=0.239 Sum_probs=101.3
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCcee---EEec-----C---------CCCCCe
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPL---RVKD-----H---------MYGLPI 76 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl---~~~~-----h---------~~~~pI 76 (248)
++.+..| +-.+++++.+|++...|+++-++ +|.=||+-+++-. +..+ | .|-..|
T Consensus 135 ~~~~~~H-~~s~~~vals~d~~~~fsask~g--------~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~kei 205 (479)
T KOG0299|consen 135 FRVIGKH-QLSVTSVALSPDDKRVFSASKDG--------TILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEI 205 (479)
T ss_pred ceeeccc-cCcceEEEeeccccceeecCCCc--------ceeeeehhcCcccccccccchhhhhccCCCCccccccccee
Confidence 5555555 68899999999999999998885 9999999988633 1111 1 334678
Q ss_pred eEEEEcCCc--eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 77 RDIKFHDNY--VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 77 ~sI~F~~d~--l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
.+++.++|+ ++++ -|+.|.|||.++++.+.++.+ |...|.++||..+...+++++.|+.|++|.+.++
T Consensus 206 l~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~g-hr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~ 276 (479)
T KOG0299|consen 206 LTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKG-HRGAVSSLAFRKGTSELYSASADRSVKVWSIDQL 276 (479)
T ss_pred EEEEEcCCCcEEEecCCCceEEEecCcccchhhcccc-cccceeeeeeecCccceeeeecCCceEEEehhHh
Confidence 899999998 6655 588999999999999999998 7999999999999999999999999999998763
No 144
>KOG2111|consensus
Probab=98.84 E-value=1.1e-07 Score=86.57 Aligned_cols=91 Identities=14% Similarity=0.335 Sum_probs=78.4
Q ss_pred CeeEEEEcCCCce---eEEecCCCCCCeeEEEEcCCc--eeee-CCC-eEEEEECCCCCEEEEeecC-CCCCeeEEEEeC
Q psy2083 52 PAFYLYDIRADKP---LRVKDHMYGLPIRDIKFHDNY--VLSM-DSS-VVKIWSKDNGSLFTCIESG-DQTQFNNLCHIP 123 (248)
Q Consensus 52 G~V~LwDlRs~~p---l~~~~h~~~~pI~sI~F~~d~--l~Ss-dd~-~IKIWD~~tGk~~~tie~~-h~~~In~l~~~p 123 (248)
|+|+|-|+.+-++ ..+..|. .+|.+++.+.++ |+++ ..| .|||||..+|+.+..+.-+ +.+.|-+++|+|
T Consensus 159 GqvQi~dL~~~~~~~p~~I~AH~--s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp 236 (346)
T KOG2111|consen 159 GQVQIVDLASTKPNAPSIINAHD--SDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSP 236 (346)
T ss_pred ceEEEEEhhhcCcCCceEEEccc--CceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCC
Confidence 7999999998654 7888887 899999999998 6654 566 5999999999999988732 357999999999
Q ss_pred CCCEEEEEeCCCeEEEEEcCC
Q psy2083 124 ESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 124 dsgll~sa~ed~~I~~w~Ip~ 144 (248)
|+.+|+++|+.++++++-+..
T Consensus 237 ~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 237 NSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred CccEEEEEcCCCeEEEEEeec
Confidence 999999999999999997654
No 145
>KOG0649|consensus
Probab=98.83 E-value=9.4e-08 Score=84.61 Aligned_cols=124 Identities=9% Similarity=0.245 Sum_probs=102.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe---cC------CCCCCe
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK---DH------MYGLPI 76 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~---~h------~~~~pI 76 (248)
.|..+|++-.++.+| ++.|.+++--..++.++++++|+ +||+||.++++.+.+. .| ..+..|
T Consensus 141 ~dlE~G~i~r~~rGH-tDYvH~vv~R~~~~qilsG~EDG--------tvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wi 211 (325)
T KOG0649|consen 141 VDLEDGRIQREYRGH-TDYVHSVVGRNANGQILSGAEDG--------TVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWI 211 (325)
T ss_pred EEecCCEEEEEEcCC-cceeeeeeecccCcceeecCCCc--------cEEEEeccccceeEEeccccChhhcCcccCcee
Confidence 566789999998887 78998888766677788888875 9999999999876543 22 134568
Q ss_pred eEEEEcCCceeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 77 RDIKFHDNYVLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 77 ~sI~F~~d~l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
-+++-+.|-++++....+.+|.+++.++.+.|.- ++++..+.|..| +++++++.+.|..|-+
T Consensus 212 gala~~edWlvCGgGp~lslwhLrsse~t~vfpi--pa~v~~v~F~~d--~vl~~G~g~~v~~~~l 273 (325)
T KOG0649|consen 212 GALAVNEDWLVCGGGPKLSLWHLRSSESTCVFPI--PARVHLVDFVDD--CVLIGGEGNHVQSYTL 273 (325)
T ss_pred EEEeccCceEEecCCCceeEEeccCCCceEEEec--ccceeEeeeecc--eEEEeccccceeeeee
Confidence 8888888888888888899999999999999987 899999999755 7899999999999864
No 146
>KOG0308|consensus
Probab=98.83 E-value=3.6e-08 Score=96.26 Aligned_cols=115 Identities=11% Similarity=0.154 Sum_probs=94.3
Q ss_pred CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEE
Q psy2083 20 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKI 96 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKI 96 (248)
++...|.+++..+.+.++++||..+ .+++||-|+++-+...- +|...|+.|-.++|+ |.+|.|++||+
T Consensus 169 G~k~siYSLA~N~t~t~ivsGgtek--------~lr~wDprt~~kimkLr-GHTdNVr~ll~~dDGt~~ls~sSDgtIrl 239 (735)
T KOG0308|consen 169 GPKDSIYSLAMNQTGTIIVSGGTEK--------DLRLWDPRTCKKIMKLR-GHTDNVRVLLVNDDGTRLLSASSDGTIRL 239 (735)
T ss_pred CCccceeeeecCCcceEEEecCccc--------ceEEeccccccceeeee-ccccceEEEEEcCCCCeEeecCCCceEEe
Confidence 4467888888887554455555554 89999999987655432 445899999999998 55578999999
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
||+.-.++++++.. |...|.++..+|+=..+.+|+.|+.|..-++..
T Consensus 240 WdLgqQrCl~T~~v-H~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n 286 (735)
T KOG0308|consen 240 WDLGQQRCLATYIV-HKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRN 286 (735)
T ss_pred eeccccceeeeEEe-ccCceEEEeeCCCcceEEecCCCCcEEecccCC
Confidence 99999999999998 688899999999889999999999998877765
No 147
>KOG1273|consensus
Probab=98.82 E-value=2e-08 Score=91.43 Aligned_cols=96 Identities=15% Similarity=0.175 Sum_probs=76.8
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc---eeeeC
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY---VLSMD 90 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~---l~Ssd 90 (248)
.+++.. ..+++.|++-|.++++|+.++ .|.|||+-+.++-.+. .|- .||.+++|++++ +.+|.
T Consensus 19 ~tld~~---~a~~~~Fs~~G~~lAvGc~nG--------~vvI~D~~T~~iar~lsaH~--~pi~sl~WS~dgr~LltsS~ 85 (405)
T KOG1273|consen 19 HTLDNP---LAECCQFSRWGDYLAVGCANG--------RVVIYDFDTFRIARMLSAHV--RPITSLCWSRDGRKLLTSSR 85 (405)
T ss_pred eeccCC---ccceEEeccCcceeeeeccCC--------cEEEEEccccchhhhhhccc--cceeEEEecCCCCEeeeecC
Confidence 345544 256777777666677777774 8999999998765554 455 899999999998 55568
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES 125 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds 125 (248)
|..|++||...|.++..+.- .++|..+.|+|..
T Consensus 86 D~si~lwDl~~gs~l~rirf--~spv~~~q~hp~k 118 (405)
T KOG1273|consen 86 DWSIKLWDLLKGSPLKRIRF--DSPVWGAQWHPRK 118 (405)
T ss_pred CceeEEEeccCCCceeEEEc--cCccceeeecccc
Confidence 99999999999999999998 7999999999844
No 148
>KOG1332|consensus
Probab=98.82 E-value=1.8e-08 Score=88.98 Aligned_cols=120 Identities=13% Similarity=0.207 Sum_probs=87.1
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce---eEEecCCCCCCeeEEEEc-CCc---ee
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP---LRVKDHMYGLPIRDIKFH-DNY---VL 87 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p---l~~~~h~~~~pI~sI~F~-~d~---l~ 87 (248)
++++..|.+.|.++.-.=-+..|+++++|. +|||+++|.+.+ +.+. .+|..||..++|- |.. |+
T Consensus 4 q~idt~H~D~IHda~lDyygkrlATcsSD~--------tVkIf~v~~n~~s~ll~~L-~Gh~GPVwqv~wahPk~G~iLA 74 (299)
T KOG1332|consen 4 QTIDTQHEDMIHDAQLDYYGKRLATCSSDG--------TVKIFEVRNNGQSKLLAEL-TGHSGPVWKVAWAHPKFGTILA 74 (299)
T ss_pred eehhhhhhhhhhHhhhhhhcceeeeecCCc--------cEEEEEEcCCCCceeeeEe-cCCCCCeeEEeecccccCcEee
Confidence 445555667776665443355688888885 999999998754 3443 3556999999995 442 55
Q ss_pred ee-CCCeEEEEECCCCCEEEE--eecCCCCCeeEEEEeCCC--CEEEEEeCCCeEEEEEcCC
Q psy2083 88 SM-DSSVVKIWSKDNGSLFTC--IESGDQTQFNNLCHIPES--GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 88 Ss-dd~~IKIWD~~tGk~~~t--ie~~h~~~In~l~~~pds--gll~sa~ed~~I~~w~Ip~ 144 (248)
|+ -|+.|-||..++|+--.. ... |.+.||+++|.|++ -+|++|+.|++|.+..+..
T Consensus 75 ScsYDgkVIiWke~~g~w~k~~e~~~-h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~ 135 (299)
T KOG1332|consen 75 SCSYDGKVIIWKEENGRWTKAYEHAA-HSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDS 135 (299)
T ss_pred EeecCceEEEEecCCCchhhhhhhhh-hcccceeecccccccceEEEEeeCCCcEEEEEEcC
Confidence 54 689888999998843222 223 68999999999965 4678889999999988765
No 149
>KOG0641|consensus
Probab=98.81 E-value=5.9e-08 Score=85.23 Aligned_cols=112 Identities=13% Similarity=0.182 Sum_probs=88.2
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWS 98 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD 98 (248)
++.|..+|..|.+.+|+++-.|. .+.|||||.++|++.+ |.|...|.+|.|+|.. +.++-|..||+=|
T Consensus 231 ssavaav~vdpsgrll~sg~~ds--------sc~lydirg~r~iq~f-~phsadir~vrfsp~a~yllt~syd~~ikltd 301 (350)
T KOG0641|consen 231 SSAVAAVAVDPSGRLLASGHADS--------SCMLYDIRGGRMIQRF-HPHSADIRCVRFSPGAHYLLTCSYDMKIKLTD 301 (350)
T ss_pred cceeEEEEECCCcceeeeccCCC--------ceEEEEeeCCceeeee-CCCccceeEEEeCCCceEEEEecccceEEEee
Confidence 35788888888766666666665 8999999999998876 5666999999999986 5567899999999
Q ss_pred CCCCCEEEEe----ecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 99 KDNGSLFTCI----ESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 99 ~~tGk~~~ti----e~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+. |.+-..+ -+.|...+-.+.|+|..=-+++.+.|+++.+|-+|
T Consensus 302 lq-gdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 302 LQ-GDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred cc-cchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 87 4432221 12256666678899999889999999999999765
No 150
>KOG2048|consensus
Probab=98.80 E-value=3.9e-08 Score=96.23 Aligned_cols=113 Identities=15% Similarity=0.260 Sum_probs=90.1
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCC-------CCCeeEEEEcCCc-eeeeC-CC
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMY-------GLPIRDIKFHDNY-VLSMD-SS 92 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~-------~~pI~sI~F~~d~-l~Ssd-d~ 92 (248)
.+-|-++.|.|++-.+++|+.| |.|++||+.++..+...+-+. ..-|.+|.|..++ |+|+| .|
T Consensus 154 ~sRvLslsw~~~~~~i~~Gs~D--------g~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G 225 (691)
T KOG2048|consen 154 KSRVLSLSWNPTGTKIAGGSID--------GVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIASGDSAG 225 (691)
T ss_pred cceEEEEEecCCccEEEecccC--------ceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCcEEEecCCc
Confidence 3567788888765546666666 489999999997766322111 1237789998887 88887 67
Q ss_pred eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 93 VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 93 ~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+|++||..+|.++.++.- |.+.|++++..++...+++|+-|++|-.|...
T Consensus 226 ~V~FWd~~~gTLiqS~~~-h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~ 275 (691)
T KOG2048|consen 226 TVTFWDSIFGTLIQSHSC-HDADVLALAVADNEDRVFSAGVDPKIIQYSLT 275 (691)
T ss_pred eEEEEcccCcchhhhhhh-hhcceeEEEEcCCCCeEEEccCCCceEEEEec
Confidence 999999999999999988 69999999999999999999999999888743
No 151
>KOG2110|consensus
Probab=98.79 E-value=2e-07 Score=86.16 Aligned_cols=132 Identities=14% Similarity=0.228 Sum_probs=90.4
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCC--CCCCeeEEEEcCCc--
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHM--YGLPIRDIKFHDNY-- 85 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~--~~~pI~sI~F~~d~-- 85 (248)
.++.+..+.-- .+.+.+=++|| ...|.+-=.-++..+...+.|.+|||+.-+++.+.+.. +...+-.+++++..
T Consensus 66 qpr~Lkv~~~K-k~~~ICe~~fp-t~IL~VrmNr~RLvV~Lee~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~y 143 (391)
T KOG2110|consen 66 QPRKLKVVHFK-KKTTICEIFFP-TSILAVRMNRKRLVVCLEESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCY 143 (391)
T ss_pred CCceEEEEEcc-cCceEEEEecC-CceEEEEEccceEEEEEcccEEEEecccceeehhhhccCCCccceEeeccCCCCce
Confidence 34444444332 23444444555 22232222333444445557999999999998876433 33345555555543
Q ss_pred ee---eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCe-EEEEEcCC
Q psy2083 86 VL---SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKK-ILTYYIPS 144 (248)
Q Consensus 86 l~---Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~-I~~w~Ip~ 144 (248)
++ +.+.+.|.|||..+=+++.+|+. |..++-+++|+|+|.+|++|++.|+ |++|.+|.
T Consensus 144 lAyp~s~t~GdV~l~d~~nl~~v~~I~a-H~~~lAalafs~~G~llATASeKGTVIRVf~v~~ 205 (391)
T KOG2110|consen 144 LAYPGSTTSGDVVLFDTINLQPVNTINA-HKGPLAALAFSPDGTLLATASEKGTVIRVFSVPE 205 (391)
T ss_pred EEecCCCCCceEEEEEcccceeeeEEEe-cCCceeEEEECCCCCEEEEeccCceEEEEEEcCC
Confidence 22 23688999999999999999998 7999999999999999999999987 58998876
No 152
>KOG4378|consensus
Probab=98.77 E-value=3.9e-08 Score=93.85 Aligned_cols=124 Identities=12% Similarity=0.202 Sum_probs=99.9
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----ee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VL 87 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~ 87 (248)
.+.+.+.+| ++.|+.+-+...+.++++++.. |.|-|..+.++.-...+.|+.+..|.-+.|++.. .+
T Consensus 112 l~hr~lkdh-~stvt~v~YN~~DeyiAsvs~g--------Gdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~ 182 (673)
T KOG4378|consen 112 LIHRFLKDH-QSTVTYVDYNNTDEYIASVSDG--------GDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSI 182 (673)
T ss_pred HHhhhccCC-cceeEEEEecCCcceeEEeccC--------CcEEEEecccCccccceecCCCCeEEEeecccccceeeEe
Confidence 355555565 8999999998878777666544 4899999999876667778878889999999986 33
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCC
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~ 144 (248)
.+|+++|.+||.....++..+...|.+|-..+||+| +-.+|++.+-|.+|.+||+.+
T Consensus 183 asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s 240 (673)
T KOG4378|consen 183 ASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRS 240 (673)
T ss_pred eccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeeccc
Confidence 469999999999977777666544799999999999 557888889999999999874
No 153
>KOG2048|consensus
Probab=98.76 E-value=2.5e-07 Score=90.71 Aligned_cols=122 Identities=16% Similarity=0.147 Sum_probs=100.8
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM 89 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss 89 (248)
+...+.++....|-++||. ++|-||++|.++ .|.=||+.+.+|+...+ ..+.+|.+++-+|.. .++|
T Consensus 60 ~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg--------~i~EwDl~~lk~~~~~d-~~gg~IWsiai~p~~~~l~Igc 129 (691)
T KOG2048|consen 60 LEPVIHGPEDRSIESLAWA-EGGRLFSSGLSG--------SITEWDLHTLKQKYNID-SNGGAIWSIAINPENTILAIGC 129 (691)
T ss_pred eeEEEecCCCCceeeEEEc-cCCeEEeecCCc--------eEEEEecccCceeEEec-CCCcceeEEEeCCccceEEeec
Confidence 4455677667788899988 478899999885 89999999999988776 346899999999986 6678
Q ss_pred CCCeEEEEECCCCCEEEEee-cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 90 DSSVVKIWSKDNGSLFTCIE-SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 90 dd~~IKIWD~~tGk~~~tie-~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
||+.+.+.+...++...... +...+.|-++.|.|++.-|++|+.|+.|++|++..
T Consensus 130 ddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~ 185 (691)
T KOG2048|consen 130 DDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKS 185 (691)
T ss_pred CCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCC
Confidence 99999999998887654332 21147899999999999999999999999999765
No 154
>KOG4328|consensus
Probab=98.75 E-value=6.2e-08 Score=91.42 Aligned_cols=167 Identities=10% Similarity=0.116 Sum_probs=113.8
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCC-cEEEeecCceeeeecCCeeEEEEcCCCce---eEEecCCCCCCeeEEEEc
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPAFYLYDIRADKP---LRVKDHMYGLPIRDIKFH 82 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g-~l~~ag~d~~~~~~~~G~V~LwDlRs~~p---l~~~~h~~~~pI~sI~F~ 82 (248)
+..+-.+.+.+.-+ ...|.++.|.|--. .++++|+-. |+|-+||++...| -..+.+.|+.||.++.|+
T Consensus 172 ~l~~~~~~~v~kv~-~~Rit~l~fHPt~~~~lva~GdK~-------G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~ 243 (498)
T KOG4328|consen 172 DLDDYRILNVAKVT-DRRITSLAFHPTENRKLVAVGDKG-------GQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFS 243 (498)
T ss_pred ccccceecceeEec-ccceEEEEecccCcceEEEEccCC-------CcEEEEecCCCCCccCceEEeccCCccccceEec
Confidence 33333444444443 46899999998655 466776665 6999999986544 345577888999999999
Q ss_pred CCc----eeeeCCCeEEEEECCCCCE---------------------------------EEEe------------ecCCC
Q psy2083 83 DNY----VLSMDSSVVKIWSKDNGSL---------------------------------FTCI------------ESGDQ 113 (248)
Q Consensus 83 ~d~----l~Ssdd~~IKIWD~~tGk~---------------------------------~~ti------------e~~h~ 113 (248)
|.. +++|.||+|+.=|.+++.. +..+ +. |.
T Consensus 244 P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~l-h~ 322 (498)
T KOG4328|consen 244 PANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRL-HK 322 (498)
T ss_pred CCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhh-hh
Confidence 975 5557899999888764211 1111 11 46
Q ss_pred CCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhcc-ccccc---cCCceeecHhHHhhcCCc
Q psy2083 114 TQFNNLCHIPES-GMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEEN-IIENV---YDDYKFVTRQELEDLGLG 188 (248)
Q Consensus 114 ~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~-~~~~~---yd~y~fvt~~~l~~l~~~ 188 (248)
..|++|+++|-. .+|++|+-|.+.++||...|++-+.. ||- .+++. ....+ -++=..||..+...+++.
T Consensus 323 kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp--~ls----t~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~ 396 (498)
T KOG4328|consen 323 KKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASP--FLS----TLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVF 396 (498)
T ss_pred cccceeecCCCCchheeecccCcceeeeehhhhcCCCCc--cee----cccccceeeeeEEcCCCCceEeeccCCceEEe
Confidence 689999999954 78999999999999999999887741 333 33443 11222 234457777777777764
No 155
>KOG0321|consensus
Probab=98.75 E-value=5.9e-08 Score=94.64 Aligned_cols=125 Identities=18% Similarity=0.260 Sum_probs=86.9
Q ss_pred CCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc--------------------eeEE---ecC---CCCC
Q psy2083 21 DQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK--------------------PLRV---KDH---MYGL 74 (248)
Q Consensus 21 ~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~--------------------pl~~---~~h---~~~~ 74 (248)
|+..|-++||.|.+..+|+.|+-+ |.|+|||+|... |... ..+ .++.
T Consensus 143 H~~SvkS~cf~~~n~~vF~tGgRD-------g~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ 215 (720)
T KOG0321|consen 143 HTGSVKSECFMPTNPAVFCTGGRD-------GEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASN 215 (720)
T ss_pred cccccchhhhccCCCcceeeccCC-------CcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccC
Confidence 378999999999999877665553 599999999754 1110 000 1112
Q ss_pred ----CeeEEEEcCCc-eeee--CCCeEEEEECCCCCEEEEeec------C-C---CCCeeEEEEeCCCCEEEEEeCCCeE
Q psy2083 75 ----PIRDIKFHDNY-VLSM--DSSVVKIWSKDNGSLFTCIES------G-D---QTQFNNLCHIPESGMMFIANENKKI 137 (248)
Q Consensus 75 ----pI~sI~F~~d~-l~Ss--dd~~IKIWD~~tGk~~~tie~------~-h---~~~In~l~~~pdsgll~sa~ed~~I 137 (248)
.|+.+.|..+. |+++ -|++||+||+++.......++ + | ...+.+++...-|..|++.|.|+.|
T Consensus 216 ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sI 295 (720)
T KOG0321|consen 216 TIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSI 295 (720)
T ss_pred ceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcE
Confidence 24456666555 6654 499999999996443333222 0 1 2356777777777999999999999
Q ss_pred EEEEcCCCCCCCCcc
Q psy2083 138 LTYYIPSLGPAPKWC 152 (248)
Q Consensus 138 ~~w~Ip~lG~aP~wc 152 (248)
..|.++.++..|.-|
T Consensus 296 y~ynm~s~s~sP~~~ 310 (720)
T KOG0321|consen 296 YFYNMRSLSISPVAE 310 (720)
T ss_pred EEEeccccCcCchhh
Confidence 999999999999766
No 156
>KOG0322|consensus
Probab=98.75 E-value=2.3e-08 Score=89.18 Aligned_cols=53 Identities=11% Similarity=0.207 Sum_probs=49.6
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+-|+.|||+..+++.+++.+.- |.+.||+++|+||.+++++|+.|.+|.+|.+
T Consensus 270 GWD~RiRVyswrtl~pLAVLky-Hsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 270 GWDHRIRVYSWRTLNPLAVLKY-HSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred ccCCcEEEEEeccCCchhhhhh-hhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 3589999999999999999998 6999999999999999999999999999974
No 157
>KOG0294|consensus
Probab=98.73 E-value=1.9e-07 Score=84.91 Aligned_cols=121 Identities=13% Similarity=0.225 Sum_probs=83.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCC--cEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESG--MMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFH 82 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g--~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~ 82 (248)
+|+++.+.+..+-.| ++.|+.+.|.++.. +|++|++|+ .|.+||..+=..+.. +.|. ..|+.|+.|
T Consensus 68 YDm~k~~qlg~ll~H-agsitaL~F~~~~S~shLlS~sdDG--------~i~iw~~~~W~~~~slK~H~--~~Vt~lsiH 136 (362)
T KOG0294|consen 68 YDMRKRKQLGILLSH-AGSITALKFYPPLSKSHLLSGSDDG--------HIIIWRVGSWELLKSLKAHK--GQVTDLSIH 136 (362)
T ss_pred Eeccchhhhcceecc-ccceEEEEecCCcchhheeeecCCC--------cEEEEEcCCeEEeeeecccc--cccceeEec
Confidence 467777788887776 79999999998876 788887774 999999987655544 5666 559999999
Q ss_pred CCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 83 DNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 83 ~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
|.+ +.-++|+.++.||+-+|+.-..+.- ...-..|.|+|.|..+++.+ ..+|-+|
T Consensus 137 PS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L--~~~at~v~w~~~Gd~F~v~~-~~~i~i~ 194 (362)
T KOG0294|consen 137 PSGKLALSVGGDQVLRTWNLVRGRVAFVLNL--KNKATLVSWSPQGDHFVVSG-RNKIDIY 194 (362)
T ss_pred CCCceEEEEcCCceeeeehhhcCccceeecc--CCcceeeEEcCCCCEEEEEe-ccEEEEE
Confidence 998 4447899999999998875443332 11112255555555444443 2334444
No 158
>KOG2106|consensus
Probab=98.71 E-value=3.6e-07 Score=87.39 Aligned_cols=120 Identities=16% Similarity=0.261 Sum_probs=95.8
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS 88 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S 88 (248)
|-.+.++.++ .....++-.|+...++++|-|+ +|+||+ ..+|.+++-.. .|+.++.|||.+ +++
T Consensus 359 ~f~~~v~gh~--delwgla~hps~~q~~T~gqdk--------~v~lW~--~~k~~wt~~~~--d~~~~~~fhpsg~va~G 424 (626)
T KOG2106|consen 359 GFTLTVQGHG--DELWGLATHPSKNQLLTCGQDK--------HVRLWN--DHKLEWTKIIE--DPAECADFHPSGVVAVG 424 (626)
T ss_pred CceEEEEecc--cceeeEEcCCChhheeeccCcc--------eEEEcc--CCceeEEEEec--CceeEeeccCcceEEEe
Confidence 3344444443 5889999999888788888775 999999 67888887555 899999999999 445
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLG 146 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG 146 (248)
...+-.-+-|.++.. +-++.. +..+++.+.|+|+|.+|++|+.|+.|.+|-|.+=|
T Consensus 425 t~~G~w~V~d~e~~~-lv~~~~-d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g 480 (626)
T KOG2106|consen 425 TATGRWFVLDTETQD-LVTIHT-DNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANG 480 (626)
T ss_pred eccceEEEEecccce-eEEEEe-cCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCC
Confidence 567777789999844 445555 27899999999999999999999999999987644
No 159
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.71 E-value=9.6e-07 Score=76.71 Aligned_cols=122 Identities=16% Similarity=0.363 Sum_probs=88.2
Q ss_pred eeEEEecCCCCCeeEEEE-eCCCCcEEEeecCceeeeecCCeeEEEEcCC-CceeEE-ecCCCCCCeeEEEEcCCc--ee
Q psy2083 13 LFTCIESGDQTQFNNLCH-IPESGMMFIANENKKILTYYIPAFYLYDIRA-DKPLRV-KDHMYGLPIRDIKFHDNY--VL 87 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~-~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~pl~~-~~h~~~~pI~sI~F~~d~--l~ 87 (248)
.+..+...+...+..+.+ .+++..++.+.++ .++.+.+||+.. ...... ..|. ..|+.++|+|++ ++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~ 171 (466)
T COG2319 100 LIKSLEGLHDSSVSKLALSSPDGNSILLASSS------LDGTVKLWDLSTPGKLIRTLEGHS--ESVTSLAFSPDGKLLA 171 (466)
T ss_pred eEEEEeccCCCceeeEEEECCCcceEEeccCC------CCccEEEEEecCCCeEEEEEecCc--ccEEEEEECCCCCEEE
Confidence 455555532225666666 5655534443333 135999999998 443333 3444 789999999998 44
Q ss_pred e-eC-CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC-EEEEEeCCCeEEEEEcC
Q psy2083 88 S-MD-SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIP 143 (248)
Q Consensus 88 S-sd-d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg-ll~sa~ed~~I~~w~Ip 143 (248)
+ +. ++.+++||..+++.+..+.+ |...|.+++++|++. ++++++.|+.|.+|+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~ 229 (466)
T COG2319 172 SGSSLDGTIKLWDLRTGKPLSTLAG-HTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLS 229 (466)
T ss_pred ecCCCCCceEEEEcCCCceEEeecc-CCCceEEEEEcCCcceEEEEecCCCcEEEEECC
Confidence 4 33 99999999999999999998 689999999999998 55555999999999765
No 160
>KOG0303|consensus
Probab=98.71 E-value=1.3e-07 Score=88.11 Aligned_cols=121 Identities=8% Similarity=0.126 Sum_probs=92.7
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---ee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VL 87 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~ 87 (248)
+....+.+| +..|..+.++|--.. |+++|.|. +|.|||+-++..+.+.+|. .-|.+++|+.|+ +.
T Consensus 122 epvv~L~gH-~rrVg~V~wHPtA~NVLlsag~Dn--------~v~iWnv~tgeali~l~hp--d~i~S~sfn~dGs~l~T 190 (472)
T KOG0303|consen 122 EPVVELYGH-QRRVGLVQWHPTAPNVLLSAGSDN--------TVSIWNVGTGEALITLDHP--DMVYSMSFNRDGSLLCT 190 (472)
T ss_pred cceEEEeec-ceeEEEEeecccchhhHhhccCCc--------eEEEEeccCCceeeecCCC--CeEEEEEeccCCceeee
Confidence 345566676 788989999986555 77888887 8999999999998888866 889999999998 34
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCC-CCeeEEEEeCCCCEEEEE---eCCCeEEEEEcCC
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQ-TQFNNLCHIPESGMMFIA---NENKKILTYYIPS 144 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~-~~In~l~~~pdsgll~sa---~ed~~I~~w~Ip~ 144 (248)
++-|+.|||||.++|+.+..-.+ |. +.-.-+.|-.+|.++-+| ..++++-+|+--.
T Consensus 191 tckDKkvRv~dpr~~~~v~e~~~-heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~n 250 (472)
T KOG0303|consen 191 TCKDKKVRVIDPRRGTVVSEGVA-HEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNN 250 (472)
T ss_pred ecccceeEEEcCCCCcEeeeccc-ccCCCcceeEEeccCceeeeccccccccceeccCccc
Confidence 46899999999999999987755 34 334456777788844444 2467889997443
No 161
>KOG1408|consensus
Probab=98.69 E-value=1.4e-07 Score=93.39 Aligned_cols=113 Identities=9% Similarity=0.156 Sum_probs=99.4
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe--cCCCCCCeeEEEEcCCc--ee-eeCCCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK--DHMYGLPIRDIKFHDNY--VL-SMDSSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~--~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIW 97 (248)
..+.+...-|..+++++++-|. .|+|||+.+++....+ +|++.+..-+|...|.+ |+ |+.|+++-|+
T Consensus 597 tTlYDm~Vdp~~k~v~t~cQDr--------nirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~ 668 (1080)
T KOG1408|consen 597 TTLYDMAVDPTSKLVVTVCQDR--------NIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFV 668 (1080)
T ss_pred ceEEEeeeCCCcceEEEEeccc--------ceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEE
Confidence 4677888889899999999887 7999999999887764 67775667788899998 44 5689999999
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|-.+|+++++..+ |...|+.+-|.+|..-|++++.|+.|-+|-+|.
T Consensus 669 Df~sgEcvA~m~G-HsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 669 DFVSGECVAQMTG-HSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred EeccchhhhhhcC-cchheeeeeecccchhheeecCCceEEEEECch
Confidence 9999999999998 699999999999999999999999999999863
No 162
>KOG1274|consensus
Probab=98.68 E-value=2.3e-07 Score=93.49 Aligned_cols=109 Identities=14% Similarity=0.246 Sum_probs=85.3
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce-eEEecCCCCCCeeEEEEcCCc--eee-eCCCeEEEEEC
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP-LRVKDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIWSK 99 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p-l~~~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD~ 99 (248)
++..++|+-++.++++||+|- .|++-++-.+.. ...+.|. .||.+|.|+|.+ |++ +-||+|+|||.
T Consensus 98 p~r~~~v~g~g~~iaagsdD~--------~vK~~~~~D~s~~~~lrgh~--apVl~l~~~p~~~fLAvss~dG~v~iw~~ 167 (933)
T KOG1274|consen 98 PIRDLAVSGSGKMIAAGSDDT--------AVKLLNLDDSSQEKVLRGHD--APVLQLSYDPKGNFLAVSSCDGKVQIWDL 167 (933)
T ss_pred cceEEEEecCCcEEEeecCce--------eEEEEeccccchheeecccC--CceeeeeEcCCCCEEEEEecCceEEEEEc
Confidence 577888888776777777775 899999887644 3344555 999999999998 444 56999999999
Q ss_pred CCCCEEEEeec-------CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 100 DNGSLFTCIES-------GDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 100 ~tGk~~~tie~-------~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
.+|.+..++.+ .....++-++|+|+||.+++.+-|+.|++|..
T Consensus 168 ~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r 217 (933)
T KOG1274|consen 168 QDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSR 217 (933)
T ss_pred ccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEcc
Confidence 99988777653 01234567899999999999999999999974
No 163
>KOG0307|consensus
Probab=98.68 E-value=7.5e-08 Score=98.57 Aligned_cols=129 Identities=16% Similarity=0.261 Sum_probs=99.0
Q ss_pred CceeEEEecCC-CCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--
Q psy2083 11 GSLFTCIESGD-QTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY-- 85 (248)
Q Consensus 11 G~~~~~~~~~~-~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~-- 85 (248)
.+.+..+..+. ...+..+.|+|+... ++++++|+ ....|.+||+|-. .|+.+. .+|...|.++.|++..
T Consensus 194 ~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd-----~~PviqlWDlR~assP~k~~-~~H~~GilslsWc~~D~~ 267 (1049)
T KOG0307|consen 194 KKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDD-----SAPVIQLWDLRFASSPLKIL-EGHQRGILSLSWCPQDPR 267 (1049)
T ss_pred CCcccccccCCCccceeeeeeCCCCceeeeeecCCC-----CCceeEeecccccCCchhhh-cccccceeeeccCCCCch
Confidence 34444444331 134778889988666 66666766 4689999999975 788887 2345889999999865
Q ss_pred -ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCCCC
Q psy2083 86 -VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPSLG 146 (248)
Q Consensus 86 -l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~lG 146 (248)
++ |+-|+.|-+|+.+||+.+..+-.+ ...+.++.|+| +.++|.+++=|++|.+|-+-..+
T Consensus 268 lllSsgkD~~ii~wN~~tgEvl~~~p~~-~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 268 LLLSSGKDNRIICWNPNTGEVLGELPAQ-GNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred hhhcccCCCCeeEecCCCceEeeecCCC-CcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 44 557888889999999999999873 68999999999 45799999999999999876543
No 164
>KOG4227|consensus
Probab=98.66 E-value=3.3e-07 Score=85.64 Aligned_cols=117 Identities=10% Similarity=0.106 Sum_probs=98.7
Q ss_pred CCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEc------CCCceeEEecCCCCCCeeEEEEcCCc--eeee-CC
Q psy2083 21 DQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDI------RADKPLRVKDHMYGLPIRDIKFHDNY--VLSM-DS 91 (248)
Q Consensus 21 ~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDl------Rs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ss-dd 91 (248)
|.+.||.+.|+..+.+|+++|+|. .++||.+ |+++|+..+.|.|...|-+++|.... |.|+ .+
T Consensus 55 H~GCiNAlqFS~N~~~L~SGGDD~--------~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~ 126 (609)
T KOG4227|consen 55 HTGCINALQFSHNDRFLASGGDDM--------HGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERW 126 (609)
T ss_pred hccccceeeeccCCeEEeecCCcc--------eeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCc
Confidence 478999999999888888888886 8999996 45699999999999999999998765 6665 68
Q ss_pred CeEEEEECCCCCEEEEeecC-CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 92 SVVKIWSKDNGSLFTCIESG-DQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 92 ~~IKIWD~~tGk~~~tie~~-h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
++|-.-|+++.+.+..+.-+ ....|-.+..+|-.+.+++.+.++.|.+|++..-
T Consensus 127 ~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~ 181 (609)
T KOG4227|consen 127 GTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDR 181 (609)
T ss_pred ceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCC
Confidence 99989999998877766531 1348999999999999999999999999998653
No 165
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.63 E-value=6.9e-07 Score=76.53 Aligned_cols=115 Identities=16% Similarity=0.231 Sum_probs=79.4
Q ss_pred eEEEEeCCCCcEE-EeecC-ceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc----eeee-CCCeEEEE
Q psy2083 26 NNLCHIPESGMMF-IANEN-KKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY----VLSM-DSSVVKIW 97 (248)
Q Consensus 26 ~~~~~~~~~g~l~-~ag~d-~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~----l~Ss-dd~~IKIW 97 (248)
..+.+.|+|..|+ .+..+ ++---++-|...||-++.. .|..........+|.+++|+|++ ++.+ .++.|.||
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly 88 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY 88 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence 4566667665544 33311 1111233467788888654 55555443334689999999997 3433 46799999
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC---CCeEEEEEcCC
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE---NKKILTYYIPS 144 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e---d~~I~~w~Ip~ 144 (248)
|.+ ++.+.++. ...+|.++|+|+|.+|++|+- .+.|.+|++..
T Consensus 89 d~~-~~~i~~~~---~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~ 134 (194)
T PF08662_consen 89 DVK-GKKIFSFG---TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRK 134 (194)
T ss_pred cCc-ccEeEeec---CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCC
Confidence 997 88887775 468899999999999999874 46799999874
No 166
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.63 E-value=7.4e-07 Score=84.69 Aligned_cols=127 Identities=10% Similarity=0.122 Sum_probs=84.5
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL- 87 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~- 87 (248)
|.....+..+ ...+...+|+||+..++.++.++ ...+|.+||++++++....... .....+.|+||+ |+
T Consensus 193 g~~~~~lt~~-~~~v~~p~wSPDG~~la~~s~~~-----~~~~i~i~dl~tg~~~~l~~~~--g~~~~~~wSPDG~~La~ 264 (429)
T PRK01742 193 GFNQFIVNRS-SQPLMSPAWSPDGSKLAYVSFEN-----KKSQLVVHDLRSGARKVVASFR--GHNGAPAFSPDGSRLAF 264 (429)
T ss_pred CCCceEeccC-CCccccceEcCCCCEEEEEEecC-----CCcEEEEEeCCCCceEEEecCC--CccCceeECCCCCEEEE
Confidence 4444454444 46789999999988777665432 1247999999988654332211 234578999997 43
Q ss_pred ee-CCCeEEEE--ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCCCCC
Q psy2083 88 SM-DSSVVKIW--SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPSLGP 147 (248)
Q Consensus 88 Ss-dd~~IKIW--D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~lG~ 147 (248)
++ .++.+.|| |..+++ ...+.. +...+.+.+|+|||..|+.++ .++...+|.++.-+.
T Consensus 265 ~~~~~g~~~Iy~~d~~~~~-~~~lt~-~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~ 326 (429)
T PRK01742 265 ASSKDGVLNIYVMGANGGT-PSQLTS-GAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGG 326 (429)
T ss_pred EEecCCcEEEEEEECCCCC-eEeecc-CCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 33 56666665 666665 455665 366788999999998666554 578888998765443
No 167
>KOG2394|consensus
Probab=98.62 E-value=1.1e-07 Score=91.30 Aligned_cols=91 Identities=10% Similarity=0.191 Sum_probs=77.0
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eeeCCCeEEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSMDSSVVKIWS 98 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ssdd~~IKIWD 98 (248)
++.|+..||+||+.+|++++.|+ .+||+|.-+...+-+ .+.|=....+|+|+||+ | +++.|..|.||.
T Consensus 290 ~g~in~f~FS~DG~~LA~VSqDG--------fLRvF~fdt~eLlg~-mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwS 360 (636)
T KOG2394|consen 290 EGSINEFAFSPDGKYLATVSQDG--------FLRIFDFDTQELLGV-MKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWS 360 (636)
T ss_pred cccccceeEcCCCceEEEEecCc--------eEEEeeccHHHHHHH-HHhhccceEEEEEcCCccEEEecCCcceEEEEE
Confidence 46899999999999999998885 999999988654433 23444678999999998 4 456899999999
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEe
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHI 122 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~ 122 (248)
...++.++.=++ |.++|+.|+|.
T Consensus 361 f~erRVVARGqG-HkSWVs~VaFD 383 (636)
T KOG2394|consen 361 FEERRVVARGQG-HKSWVSVVAFD 383 (636)
T ss_pred eccceEEEeccc-cccceeeEeec
Confidence 999999999998 79999999997
No 168
>KOG1009|consensus
Probab=98.62 E-value=3.2e-07 Score=85.64 Aligned_cols=114 Identities=11% Similarity=0.177 Sum_probs=89.0
Q ss_pred CCCeeEEEEeCCCC-cEEEeecCceeeeecCCeeEEEEcCCCceeE-----E---ecCCCCCCeeEEEEcCCc--eeee-
Q psy2083 22 QTQFNNLCHIPESG-MMFIANENKKILTYYIPAFYLYDIRADKPLR-----V---KDHMYGLPIRDIKFHDNY--VLSM- 89 (248)
Q Consensus 22 ~~~V~~~~~~~~~g-~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~-----~---~~h~~~~pI~sI~F~~d~--l~Ss- 89 (248)
...|.++-|.+.+. .+++||+|. .|+||-+..+.|-. . .-.+|+..||.|.|+|++ ++|+
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~--------~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~ 84 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDK--------DIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGG 84 (434)
T ss_pred CCceEEEEeccCcccceecccCcc--------ceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecC
Confidence 46888999988776 688888887 89999988764421 1 123455899999999998 5554
Q ss_pred CCCeEEEEECC--------C--------CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 90 DSSVVKIWSKD--------N--------GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 90 dd~~IKIWD~~--------t--------Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|++.|-+|-.. + ......+.+ |..+|-++||+||+..+.+++-|..+.+|++..
T Consensus 85 D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~-h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~ 154 (434)
T KOG1009|consen 85 DGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRG-HRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHA 154 (434)
T ss_pred CCceEEEEEecCcCCccccchhhhCccceEEEEEecc-cccchhhhhccCCCceeeeeeccceEEEEEecc
Confidence 78899999876 2 223334455 689999999999999999999999999999764
No 169
>KOG2096|consensus
Probab=98.60 E-value=2.3e-07 Score=84.76 Aligned_cols=126 Identities=13% Similarity=0.238 Sum_probs=95.2
Q ss_pred CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-----cee--EE---ecCCCC-CCeeEEEEcCCc--e
Q psy2083 20 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-----KPL--RV---KDHMYG-LPIRDIKFHDNY--V 86 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-----~pl--~~---~~h~~~-~pI~sI~F~~d~--l 86 (248)
+|++.|..+||+|++..+++++-|+ ++||||+.-. .|. .+ ..|.-+ .|+ .++.+|++ +
T Consensus 276 GH~saV~~~aFsn~S~r~vtvSkDG--------~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~-RL~lsP~g~~l 346 (420)
T KOG2096|consen 276 GHQSAVLAAAFSNSSTRAVTVSKDG--------KWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPV-RLELSPSGDSL 346 (420)
T ss_pred cchhheeeeeeCCCcceeEEEecCC--------cEEEeeccceEecCCCchHhhcCCcchhhcCCCce-EEEeCCCCcEE
Confidence 3489999999999998888888885 9999997543 232 21 123323 355 89999998 5
Q ss_pred eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhc
Q psy2083 87 LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEE 164 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~ 164 (248)
+.+....++++..++|+.+-+++--|...|.++.|+|+|..+++++ |+.+++. +..|.|-+ .+++|+-
T Consensus 347 A~s~gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~-----~ntpg~~~----~V~~~~~ 414 (420)
T KOG2096|consen 347 AVSFGSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG-DRYVRVI-----RNTPGWHS----RVVKLNR 414 (420)
T ss_pred EeecCCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec-ceeeeee-----cCCCchhh----HHHHhhc
Confidence 5567778999999999999888854689999999999999999888 5656554 66777764 4455553
No 170
>KOG1063|consensus
Probab=98.59 E-value=4.2e-07 Score=89.43 Aligned_cols=156 Identities=13% Similarity=0.198 Sum_probs=104.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCC---cEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESG---MMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFH 82 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g---~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~ 82 (248)
.++.+--+.+++.+| ++.|+++++-|.+. .+++|++| |+|.+|-||.......+.-+. ..+..++++
T Consensus 39 ~dp~k~~i~t~l~GH-~a~VnC~~~l~~s~~~a~~vsG~sD--------~~v~lW~l~~~~~~~i~~~~g-~~~~~~cv~ 108 (764)
T KOG1063|consen 39 ADPEKILIVTTLDGH-VARVNCVHWLPTSEIVAEMVSGDSD--------GRVILWKLRDEYLIKIYTIQG-HCKECVCVV 108 (764)
T ss_pred eCcccceeEEeccCC-ccceEEEEEcccccccceEEEccCC--------CcEEEEEEeehheEEEEeecC-cceeEEEEE
Confidence 344444466666665 89999999999777 35555555 499999999554333332221 345666666
Q ss_pred CCc-eee--eCCCeEEEEECCCCC--------------------------------------------------EEEEee
Q psy2083 83 DNY-VLS--MDSSVVKIWSKDNGS--------------------------------------------------LFTCIE 109 (248)
Q Consensus 83 ~d~-l~S--sdd~~IKIWD~~tGk--------------------------------------------------~~~tie 109 (248)
... +.+ +.|+++.+||.+..+ .+..++
T Consensus 109 a~~~~~~~~~ad~~v~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~el~ 188 (764)
T KOG1063|consen 109 ARSSVMTCKAADGTVSVWDKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSSSADSFARVAELE 188 (764)
T ss_pred eeeeEEEeeccCceEEEeecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEeccCCcceeEEEEee
Confidence 654 333 478999999984333 122345
Q ss_pred cCCCCCeeEEEEeCCCC---EEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhcc-ccccccCCceeecHhHHh
Q psy2083 110 SGDQTQFNNLCHIPESG---MMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEEN-IIENVYDDYKFVTRQELE 183 (248)
Q Consensus 110 ~~h~~~In~l~~~pdsg---ll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~-~~~~~yd~y~fvt~~~l~ 183 (248)
+ |...|++++|..-++ +|+++++|..|++|-|-. ...+.++|++ ..++.-+.++|.+-+++.
T Consensus 189 G-H~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~-----------~~~~~~~~~e~~~t~~~~~~~f~~l~~i~ 254 (764)
T KOG1063|consen 189 G-HTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVL-----------GDDEDSNEREDSLTTLSNLPVFMILEEIQ 254 (764)
T ss_pred c-cchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEe-----------cCCccccccccccccccCCceeeeeeeEE
Confidence 5 789999999987555 889999999999998753 2222233333 344556689999988877
No 171
>KOG0321|consensus
Probab=98.59 E-value=1.6e-07 Score=91.61 Aligned_cols=115 Identities=8% Similarity=0.128 Sum_probs=84.1
Q ss_pred CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE---ecCCCCCCeeEEEEcCCc----eeeeCCC
Q psy2083 20 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV---KDHMYGLPIRDIKFHDNY----VLSMDSS 92 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~---~~h~~~~pI~sI~F~~d~----l~Ssdd~ 92 (248)
.|...|.++.+.|-...|+++++|. ++++||+..++..-. ++|. ..|++++|++.. +.++-|+
T Consensus 98 aH~nAifDl~wapge~~lVsasGDs--------T~r~Wdvk~s~l~G~~~~~GH~--~SvkS~cf~~~n~~vF~tGgRDg 167 (720)
T KOG0321|consen 98 AHKNAIFDLKWAPGESLLVSASGDS--------TIRPWDVKTSRLVGGRLNLGHT--GSVKSECFMPTNPAVFCTGGRDG 167 (720)
T ss_pred cccceeEeeccCCCceeEEEccCCc--------eeeeeeeccceeecceeecccc--cccchhhhccCCCcceeeccCCC
Confidence 3468899999999444477777776 999999999876543 4554 889999999986 3445799
Q ss_pred eEEEEECCCCC--------------------EEEE-------eecCCCCCeeE---EEEeCCCCEEEEEeC-CCeEEEEE
Q psy2083 93 VVKIWSKDNGS--------------------LFTC-------IESGDQTQFNN---LCHIPESGMMFIANE-NKKILTYY 141 (248)
Q Consensus 93 ~IKIWD~~tGk--------------------~~~t-------ie~~h~~~In~---l~~~pdsgll~sa~e-d~~I~~w~ 141 (248)
.|.|||.+-.. +..- ... +...|.+ +.++.|...|++|+. |+.|++||
T Consensus 168 ~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA-~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWD 246 (720)
T KOG0321|consen 168 EILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKA-ASNTIFSSVTVVLFKDESTLASAGAADSTIKVWD 246 (720)
T ss_pred cEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccccc-ccCceeeeeEEEEEeccceeeeccCCCcceEEEe
Confidence 99999987322 0000 001 2445666 667788889999998 99999999
Q ss_pred cCCC
Q psy2083 142 IPSL 145 (248)
Q Consensus 142 Ip~l 145 (248)
|...
T Consensus 247 LRk~ 250 (720)
T KOG0321|consen 247 LRKN 250 (720)
T ss_pred eccc
Confidence 8653
No 172
>KOG1009|consensus
Probab=98.59 E-value=1.9e-07 Score=87.06 Aligned_cols=118 Identities=10% Similarity=0.188 Sum_probs=90.7
Q ss_pred EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC--------CC----c--ee-EEecCCCCCCeeEEE
Q psy2083 16 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR--------AD----K--PL-RVKDHMYGLPIRDIK 80 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR--------s~----~--pl-~~~~h~~~~pI~sI~ 80 (248)
++..| ...||.+.|+|++..|++++++ |.|.||-.. +. + .+ +...-+|+..|..++
T Consensus 60 ~Ls~H-~~aVN~vRf~p~gelLASg~D~--------g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~ 130 (434)
T KOG1009|consen 60 SLSRH-TRAVNVVRFSPDGELLASGGDG--------GEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLA 130 (434)
T ss_pred cccCC-cceeEEEEEcCCcCeeeecCCC--------ceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhh
Confidence 34455 6888888888866655555444 489999876 20 1 12 222445568999999
Q ss_pred EcCCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 81 FHDNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 81 F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
|+|++ +.++-|+++++||...|..++.+.. |...++.+|+.|-+..+++=+-|++.+++.+.
T Consensus 131 Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~d-h~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~ 195 (434)
T KOG1009|consen 131 WSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDD-HEHYVQGVAWDPLNQYVASKSSDRHPEGFSAK 195 (434)
T ss_pred ccCCCceeeeeeccceEEEEEeccceeEeeccc-cccccceeecchhhhhhhhhccCcccceeeee
Confidence 99997 5557899999999999999999888 69999999999999999999999877777543
No 173
>KOG0639|consensus
Probab=98.58 E-value=6e-08 Score=92.70 Aligned_cols=106 Identities=13% Similarity=0.158 Sum_probs=88.0
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee-eCCCeEEEEECCCC
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIWSKDNG 102 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD~~tG 102 (248)
..++.+||....|++++|+ .|++|||+....+..+ .+|...+.+|..++|+ |-+ +-|++||-||.++|
T Consensus 513 yALa~spDakvcFsccsdG--------nI~vwDLhnq~~Vrqf-qGhtDGascIdis~dGtklWTGGlDntvRcWDlreg 583 (705)
T KOG0639|consen 513 YALAISPDAKVCFSCCSDG--------NIAVWDLHNQTLVRQF-QGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREG 583 (705)
T ss_pred hhhhcCCccceeeeeccCC--------cEEEEEcccceeeecc-cCCCCCceeEEecCCCceeecCCCccceeehhhhhh
Confidence 4566778888888888885 8999999987665554 3555889999999998 555 57999999999999
Q ss_pred CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 103 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 103 k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+.+...+. .+.|-++-.+|++..+++|.+.+.+.+--.
T Consensus 584 rqlqqhdF--~SQIfSLg~cP~~dWlavGMens~vevlh~ 621 (705)
T KOG0639|consen 584 RQLQQHDF--SSQIFSLGYCPTGDWLAVGMENSNVEVLHT 621 (705)
T ss_pred hhhhhhhh--hhhheecccCCCccceeeecccCcEEEEec
Confidence 98877776 688999999999999999999999877543
No 174
>KOG0649|consensus
Probab=98.57 E-value=1.2e-06 Score=77.77 Aligned_cols=111 Identities=13% Similarity=0.170 Sum_probs=81.8
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEE-cCCc-ee-eeCCCeEEEEEC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKF-HDNY-VL-SMDSSVVKIWSK 99 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F-~~d~-l~-Ssdd~~IKIWD~ 99 (248)
..||..-..|..+.++.+|+|. .+.-||+.+|+-..++ .+|...|.+|.- +.++ |+ ++.|+++||||.
T Consensus 115 PeINam~ldP~enSi~~AgGD~--------~~y~~dlE~G~i~r~~-rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~ 185 (325)
T KOG0649|consen 115 PEINAMWLDPSENSILFAGGDG--------VIYQVDLEDGRIQREY-RGHTDYVHSVVGRNANGQILSGAEDGTVRVWDT 185 (325)
T ss_pred CccceeEeccCCCcEEEecCCe--------EEEEEEecCCEEEEEE-cCCcceeeeeeecccCcceeecCCCccEEEEec
Confidence 4678888888888888888885 8999999999876664 234489999987 4444 55 468999999999
Q ss_pred CCCCEEEEeecC-CC--------CCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 100 DNGSLFTCIESG-DQ--------TQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 100 ~tGk~~~tie~~-h~--------~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
+|++++.+|++- |+ ..| .|+.-|...|+. +..+++.+|-+|+-
T Consensus 186 kt~k~v~~ie~yk~~~~lRp~~g~wi--gala~~edWlvC-GgGp~lslwhLrss 237 (325)
T KOG0649|consen 186 KTQKHVSMIEPYKNPNLLRPDWGKWI--GALAVNEDWLVC-GGGPKLSLWHLRSS 237 (325)
T ss_pred cccceeEEeccccChhhcCcccCcee--EEEeccCceEEe-cCCCceeEEeccCC
Confidence 999999999871 01 123 344445556554 44788999988775
No 175
>KOG1034|consensus
Probab=98.56 E-value=1e-07 Score=87.16 Aligned_cols=132 Identities=11% Similarity=0.132 Sum_probs=94.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEec--CCCCCCeeEEEEc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVKD--HMYGLPIRDIKFH 82 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~--h~~~~pI~sI~F~ 82 (248)
+|..++++...+-+| -+.||.+.|.|+.-. +++++.|. +||||+|++...+.+++ -+|...|.+|.|+
T Consensus 120 id~~~~~~~~~~~gh-G~sINeik~~p~~~qlvls~SkD~--------svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~ 190 (385)
T KOG1034|consen 120 IDVVSGQCSKNYRGH-GGSINEIKFHPDRPQLVLSASKDH--------SVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFS 190 (385)
T ss_pred Eecchhhhccceecc-CccchhhhcCCCCCcEEEEecCCc--------eEEEEeccCCeEEEEecccccccCcEEEEEEc
Confidence 566777777776555 478999999998755 45666665 99999999999998873 4556899999999
Q ss_pred CCc--eee-eCCCeEEEEECCCCCEEEEeec---------------------------CCCCCeeEEEEeCCCCEEEEEe
Q psy2083 83 DNY--VLS-MDSSVVKIWSKDNGSLFTCIES---------------------------GDQTQFNNLCHIPESGMMFIAN 132 (248)
Q Consensus 83 ~d~--l~S-sdd~~IKIWD~~tGk~~~tie~---------------------------~h~~~In~l~~~pdsgll~sa~ 132 (248)
.++ ++| +.|.++|+|++..-+....+|- .|...|.|+.|. |.++++=+
T Consensus 191 ~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--gd~ilSks 268 (385)
T KOG1034|consen 191 LDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--GDFILSKS 268 (385)
T ss_pred CCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH--hhheeecc
Confidence 998 665 5899999999984222111110 134445555554 47899988
Q ss_pred CCCeEEEEEcCCCCCC
Q psy2083 133 ENKKILTYYIPSLGPA 148 (248)
Q Consensus 133 ed~~I~~w~Ip~lG~a 148 (248)
-++.|..|---.|+.+
T Consensus 269 cenaI~~w~pgkl~e~ 284 (385)
T KOG1034|consen 269 CENAIVCWKPGKLEES 284 (385)
T ss_pred cCceEEEEecchhhhh
Confidence 8899999963344443
No 176
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.56 E-value=2.5e-06 Score=77.52 Aligned_cols=110 Identities=8% Similarity=0.180 Sum_probs=78.6
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-c---eeEEecCCCCCCeeEEEEcCCc--e-ee-eCCCeE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-K---PLRVKDHMYGLPIRDIKFHDNY--V-LS-MDSSVV 94 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~---pl~~~~h~~~~pI~sI~F~~d~--l-~S-sdd~~I 94 (248)
+....++++|++..+++++..+ |.|.+||+... . ++....+ ......+.|+|++ + ++ ..++.|
T Consensus 80 ~~p~~i~~~~~g~~l~v~~~~~-------~~v~v~~~~~~g~~~~~~~~~~~--~~~~~~~~~~p~g~~l~v~~~~~~~v 150 (330)
T PRK11028 80 GSPTHISTDHQGRFLFSASYNA-------NCVSVSPLDKDGIPVAPIQIIEG--LEGCHSANIDPDNRTLWVPCLKEDRI 150 (330)
T ss_pred CCceEEEECCCCCEEEEEEcCC-------CeEEEEEECCCCCCCCceeeccC--CCcccEeEeCCCCCEEEEeeCCCCEE
Confidence 3566888999888888877543 58999999743 2 2222222 1346788999997 3 33 367899
Q ss_pred EEEECCCCCEEE-------EeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcC
Q psy2083 95 KIWSKDNGSLFT-------CIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIP 143 (248)
Q Consensus 95 KIWD~~tGk~~~-------tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip 143 (248)
.+||.++...+. .+.. ....+.++|+|||++++++++ +++|.+|++.
T Consensus 151 ~v~d~~~~g~l~~~~~~~~~~~~--g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~ 205 (330)
T PRK11028 151 RLFTLSDDGHLVAQEPAEVTTVE--GAGPRHMVFHPNQQYAYCVNELNSSVDVWQLK 205 (330)
T ss_pred EEEEECCCCcccccCCCceecCC--CCCCceEEECCCCCEEEEEecCCCEEEEEEEe
Confidence 999998743221 2223 345678999999999999998 8999999986
No 177
>KOG1063|consensus
Probab=98.54 E-value=3.9e-07 Score=89.63 Aligned_cols=118 Identities=15% Similarity=0.255 Sum_probs=90.9
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeE-EecCCCCCCeeEEEEcCCc--eee-eCCCeEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLR-VKDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIW 97 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~-~~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIW 97 (248)
--.|.+++.+|++.++++++-.... .-.-|+||...+=.... ...|. ..|+.++|+||+ ++| |-|+++++|
T Consensus 525 GyEv~~l~~s~~gnliASaCKS~~~---ehAvI~lw~t~~W~~~~~L~~Hs--LTVT~l~FSpdg~~LLsvsRDRt~sl~ 599 (764)
T KOG1063|consen 525 GYEVYALAISPTGNLIASACKSSLK---EHAVIRLWNTANWLQVQELEGHS--LTVTRLAFSPDGRYLLSVSRDRTVSLY 599 (764)
T ss_pred ceeEEEEEecCCCCEEeehhhhCCc---cceEEEEEeccchhhhheecccc--eEEEEEEECCCCcEEEEeecCceEEee
Confidence 3578888888876667776554311 22479999987754444 33455 899999999998 555 689999999
Q ss_pred ECCCCC----EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 98 SKDNGS----LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 98 D~~tGk----~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
....+. .+..+.+ |.--|.++.|+|++..+++|+.|++|++|-+|..
T Consensus 600 ~~~~~~~~e~~fa~~k~-HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~ 650 (764)
T KOG1063|consen 600 EVQEDIKDEFRFACLKA-HTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDL 650 (764)
T ss_pred eeecccchhhhhccccc-cceEEEEcccCcccceeEEecCCceEEEEeccCc
Confidence 986532 2445667 6888999999999999999999999999999886
No 178
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.54 E-value=3.3e-07 Score=57.52 Aligned_cols=39 Identities=10% Similarity=0.279 Sum_probs=36.6
Q ss_pred CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 102 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 102 Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
|+++.++++ |..+|++++|+|++.+|++++.|++|++|+
T Consensus 1 g~~~~~~~~-h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRG-HSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEES-SSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcC-CCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 578899998 699999999999999999999999999996
No 179
>KOG2055|consensus
Probab=98.54 E-value=9.5e-07 Score=83.69 Aligned_cols=129 Identities=16% Similarity=0.181 Sum_probs=103.6
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEEC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWSK 99 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~ 99 (248)
..+-....+|++..++.+|..+ .|.|--..++..+...-.. +.|..++|+.++ ++++.++.|-+||+
T Consensus 304 ~~~e~FeVShd~~fia~~G~~G--------~I~lLhakT~eli~s~Kie--G~v~~~~fsSdsk~l~~~~~~GeV~v~nl 373 (514)
T KOG2055|consen 304 KSMERFEVSHDSNFIAIAGNNG--------HIHLLHAKTKELITSFKIE--GVVSDFTFSSDSKELLASGGTGEVYVWNL 373 (514)
T ss_pred chhheeEecCCCCeEEEcccCc--------eEEeehhhhhhhhheeeec--cEEeeEEEecCCcEEEEEcCCceEEEEec
Confidence 3555666678888888888875 8998888777766655433 689999999887 66678889999999
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC--CCCCCccccccchhhh
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL--GPAPKWCGFLDNLTEE 161 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l--G~aP~wcs~ld~~tee 161 (248)
+..+++..+.......-+++|.++|+.+|++|++.|-|.+|+-.+. +.+|+.--.+||||.-
T Consensus 374 ~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~ 437 (514)
T KOG2055|consen 374 RQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTA 437 (514)
T ss_pred CCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhhee
Confidence 9999999987511334468999999999999999999999995443 7789889999999873
No 180
>KOG3881|consensus
Probab=98.53 E-value=7.3e-07 Score=82.91 Aligned_cols=111 Identities=12% Similarity=0.199 Sum_probs=91.2
Q ss_pred CeeEEEEeCC--CCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--eeeeC-CCeEEEE
Q psy2083 24 QFNNLCHIPE--SGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY--VLSMD-SSVVKIW 97 (248)
Q Consensus 24 ~V~~~~~~~~--~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd-d~~IKIW 97 (248)
.+.++.|-|. ...++++... |+||+||.|.+ +|+..++.. ..||.++...|++ |..++ .+.+..+
T Consensus 204 W~tdi~Fl~g~~~~~fat~T~~--------hqvR~YDt~~qRRPV~~fd~~-E~~is~~~l~p~gn~Iy~gn~~g~l~~F 274 (412)
T KOG3881|consen 204 WITDIRFLEGSPNYKFATITRY--------HQVRLYDTRHQRRPVAQFDFL-ENPISSTGLTPSGNFIYTGNTKGQLAKF 274 (412)
T ss_pred eeccceecCCCCCceEEEEecc--------eeEEEecCcccCcceeEeccc-cCcceeeeecCCCcEEEEecccchhhee
Confidence 3467778775 4445555555 39999999987 899988765 5799999999997 66665 7799999
Q ss_pred ECCCCCEEEE-eecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 98 SKDNGSLFTC-IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 98 D~~tGk~~~t-ie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|.+.|+.... +.+ -...|+++..+|+..++++++-|+-+++|++..
T Consensus 275 D~r~~kl~g~~~kg-~tGsirsih~hp~~~~las~GLDRyvRIhD~kt 321 (412)
T KOG3881|consen 275 DLRGGKLLGCGLKG-ITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKT 321 (412)
T ss_pred cccCceeeccccCC-ccCCcceEEEcCCCceEEeeccceeEEEeeccc
Confidence 9999998877 665 367999999999999999999999999999865
No 181
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.52 E-value=5e-06 Score=75.56 Aligned_cols=121 Identities=12% Similarity=0.164 Sum_probs=82.3
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-CceeEEecCCCCCCeeEEEEcCCc--eeee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-DKPLRVKDHMYGLPIRDIKFHDNY--VLSM 89 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~pl~~~~h~~~~pI~sI~F~~d~--l~Ss 89 (248)
.+.+++.. +....++++|++..+++++..+ +.|..||+.. ++.........+.....|.|+|++ +.++
T Consensus 27 ~~~~~~~~--~~~~~l~~spd~~~lyv~~~~~-------~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v~ 97 (330)
T PRK11028 27 LLQVVDVP--GQVQPMVISPDKRHLYVGVRPE-------FRVLSYRIADDGALTFAAESPLPGSPTHISTDHQGRFLFSA 97 (330)
T ss_pred eeeEEecC--CCCccEEECCCCCEEEEEECCC-------CcEEEEEECCCCceEEeeeecCCCCceEEEECCCCCEEEEE
Confidence 55666543 5677889999888787776543 4899999984 332222222222345689999997 4433
Q ss_pred --CCCeEEEEECCC-CC---EEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCC
Q psy2083 90 --DSSVVKIWSKDN-GS---LFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPS 144 (248)
Q Consensus 90 --dd~~IKIWD~~t-Gk---~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~ 144 (248)
.++.|.+||.++ |. .+..+.. ......++++|||+.+++++. +++|.+|++..
T Consensus 98 ~~~~~~v~v~~~~~~g~~~~~~~~~~~--~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~ 157 (330)
T PRK11028 98 SYNANCVSVSPLDKDGIPVAPIQIIEG--LEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSD 157 (330)
T ss_pred EcCCCeEEEEEECCCCCCCCceeeccC--CCcccEeEeCCCCCEEEEeeCCCCEEEEEEECC
Confidence 488999999974 42 3333333 345677899999999987775 58999999854
No 182
>KOG2919|consensus
Probab=98.51 E-value=4.8e-07 Score=82.74 Aligned_cols=129 Identities=16% Similarity=0.244 Sum_probs=92.4
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEec-CCCCCCeeEEEEcCC--c
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKD-HMYGLPIRDIKFHDN--Y 85 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~-h~~~~pI~sI~F~~d--~ 85 (248)
.+..+..+.+| .+.|+.++|-+++..+|+++.-+ ..|..||||.. .|+.... |. +..=-.|.|.-+ +
T Consensus 239 ~~~pl~llggh-~gGvThL~~~edGn~lfsGaRk~-------dkIl~WDiR~~~~pv~~L~rhv-~~TNQRI~FDld~~~ 309 (406)
T KOG2919|consen 239 GRRPLQLLGGH-GGGVTHLQWCEDGNKLFSGARKD-------DKILCWDIRYSRDPVYALERHV-GDTNQRILFDLDPKG 309 (406)
T ss_pred CCCceeeeccc-CCCeeeEEeccCcCeecccccCC-------CeEEEEeehhccchhhhhhhhc-cCccceEEEecCCCC
Confidence 45677776655 89999999999988888876643 38999999976 5665442 22 112246888754 3
Q ss_pred --eeee-CCCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhh
Q psy2083 86 --VLSM-DSSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEE 161 (248)
Q Consensus 86 --l~Ss-dd~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee 161 (248)
++|+ .|+.|++||.++ |..+..+.+ +...+|.|.++|-=.++++++-+. +|-+|. . ||.++|
T Consensus 310 ~~LasG~tdG~V~vwdlk~~gn~~sv~~~-~sd~vNgvslnP~mpilatssGqr---~f~~~~--------d--D~ge~~ 375 (406)
T KOG2919|consen 310 EILASGDTDGSVRVWDLKDLGNEVSVTGN-YSDTVNGVSLNPIMPILATSSGQR---IFKYPK--------D--DNGELE 375 (406)
T ss_pred ceeeccCCCccEEEEecCCCCCccccccc-ccccccceecCcccceeeeccCce---eecCCC--------c--cccccc
Confidence 6666 599999999998 777777776 588999999999966666666443 444443 1 777766
No 183
>KOG1332|consensus
Probab=98.49 E-value=9.3e-07 Score=78.29 Aligned_cols=124 Identities=6% Similarity=0.078 Sum_probs=89.3
Q ss_pred ceeEEEecCCCCCeeEEEEeC-CCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEec-CCCCCCeeEEEEcCCc---
Q psy2083 12 SLFTCIESGDQTQFNNLCHIP-ESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVKD-HMYGLPIRDIKFHDNY--- 85 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~-~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~~~pI~sI~F~~d~--- 85 (248)
++++++.+| +++|..+.+.. .-|. |++++-| |+|-||-=..++-..... ..|...||+|+|-|+.
T Consensus 47 ~ll~~L~Gh-~GPVwqv~wahPk~G~iLAScsYD--------gkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl 117 (299)
T KOG1332|consen 47 KLLAELTGH-SGPVWKVAWAHPKFGTILASCSYD--------GKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGL 117 (299)
T ss_pred eeeeEecCC-CCCeeEEeecccccCcEeeEeecC--------ceEEEEecCCCchhhhhhhhhhcccceeecccccccce
Confidence 577788776 89999999975 3444 4444444 599999988874322221 1334889999999985
Q ss_pred -eee-eCCCeEEEEECCCC--CEEEEeecCCCCCeeEEEEeCC---C-----------CEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VLS-MDSSVVKIWSKDNG--SLFTCIESGDQTQFNNLCHIPE---S-----------GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~S-sdd~~IKIWD~~tG--k~~~tie~~h~~~In~l~~~pd---s-----------gll~sa~ed~~I~~w~Ip~ 144 (248)
|++ |.|+.|.|.+.++. -....+...|+-.+|++++.|- | ..|++|+-|..|++|....
T Consensus 118 ~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~ 194 (299)
T KOG1332|consen 118 LLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDS 194 (299)
T ss_pred EEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCC
Confidence 444 58999999887753 2333343336889999999986 4 3599999999999997543
No 184
>KOG0974|consensus
Probab=98.47 E-value=6.7e-07 Score=91.06 Aligned_cols=115 Identities=6% Similarity=0.140 Sum_probs=95.9
Q ss_pred CCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCcee-eeCCCeEEEEEC
Q psy2083 21 DQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNYVL-SMDSSVVKIWSK 99 (248)
Q Consensus 21 ~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~l~-Ssdd~~IKIWD~ 99 (248)
|.+.+.++.++.+++.++++++|. ++|+|+|.+++.+....-+|...|..+.|+|+.++ .+.|-+.++|+.
T Consensus 174 HeG~iF~i~~s~dg~~i~s~SdDR--------siRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n~i~t~gedctcrvW~~ 245 (967)
T KOG0974|consen 174 HEGSIFSIVTSLDGRYIASVSDDR--------SIRLWPIDSREVLGCTGFGHSARVWACCFLPNRIITVGEDCTCRVWGV 245 (967)
T ss_pred cCCceEEEEEccCCcEEEEEecCc--------ceeeeecccccccCcccccccceeEEEEeccceeEEeccceEEEEEec
Confidence 479999999999999899998886 99999999986554333445589999999999844 568999999976
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ |+.+..++.|-...|..++..++.-.+.+++.|+.+++|+.-.
T Consensus 246 ~-~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 246 N-GTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred c-cceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 5 8888888873236789999999999999999999999997543
No 185
>KOG0771|consensus
Probab=98.45 E-value=9e-07 Score=82.70 Aligned_cols=108 Identities=10% Similarity=0.213 Sum_probs=80.2
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc--eee-eCCCeEEEEECCC
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIWSKDN 101 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD~~t 101 (248)
-.++|..+++.++++|.|+ ++|+||.-+-.++.. ..|. ..|+++.|+||+ |++ +.| ..+|||.++
T Consensus 148 k~vaf~~~gs~latgg~dg--------~lRv~~~Ps~~t~l~e~~~~--~eV~DL~FS~dgk~lasig~d-~~~VW~~~~ 216 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDG--------TLRVWEWPSMLTILEEIAHH--AEVKDLDFSPDGKFLASIGAD-SARVWSVNT 216 (398)
T ss_pred eEEEEcCCCCEeeeccccc--------eEEEEecCcchhhhhhHhhc--CccccceeCCCCcEEEEecCC-ceEEEEecc
Confidence 4677888778788888875 999999655544443 4454 799999999998 554 344 899999999
Q ss_pred CCEEEEee-----------------------------cC------------------------CCCCeeEEEEeCCCCEE
Q psy2083 102 GSLFTCIE-----------------------------SG------------------------DQTQFNNLCHIPESGMM 128 (248)
Q Consensus 102 Gk~~~tie-----------------------------~~------------------------h~~~In~l~~~pdsgll 128 (248)
|-+++... ++ ....|.++++++||.++
T Consensus 217 g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~ 296 (398)
T KOG0771|consen 217 GAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFL 296 (398)
T ss_pred CchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEE
Confidence 83333222 10 02368899999999999
Q ss_pred EEEeCCCeEEEEEcCC
Q psy2083 129 FIANENKKILTYYIPS 144 (248)
Q Consensus 129 ~sa~ed~~I~~w~Ip~ 144 (248)
+.|+.|+.|-+|..-.
T Consensus 297 AlGT~dGsVai~~~~~ 312 (398)
T KOG0771|consen 297 ALGTMDGSVAIYDAKS 312 (398)
T ss_pred EEeccCCcEEEEEece
Confidence 9999999998887544
No 186
>KOG0642|consensus
Probab=98.43 E-value=8.8e-07 Score=85.47 Aligned_cols=121 Identities=12% Similarity=0.180 Sum_probs=93.1
Q ss_pred EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC--------ceeEEecCCCCCCeeEEEEcCCc--
Q psy2083 16 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD--------KPLRVKDHMYGLPIRDIKFHDNY-- 85 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~--------~pl~~~~h~~~~pI~sI~F~~d~-- 85 (248)
++-.| .+.|..+.|.|-.+.+++++.++ +++||.|... +|++++. +|.+||-+|+..+++
T Consensus 289 tl~s~-~d~ir~l~~~~sep~lit~sed~--------~lk~WnLqk~~~s~~~~~epi~tfr-aH~gPVl~v~v~~n~~~ 358 (577)
T KOG0642|consen 289 TLRSH-DDCIRALAFHPSEPVLITASEDG--------TLKLWNLQKAKKSAEKDVEPILTFR-AHEGPVLCVVVPSNGEH 358 (577)
T ss_pred eeecc-hhhhhhhhcCCCCCeEEEecccc--------chhhhhhcccCCccccceeeeEEEe-cccCceEEEEecCCceE
Confidence 33444 57888888888888888888885 9999999321 5777752 344999999999987
Q ss_pred ee-eeCCCeEEEE------ECCCC----CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCC
Q psy2083 86 VL-SMDSSVVKIW------SKDNG----SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 86 l~-Ssdd~~IKIW------D~~tG----k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~ 147 (248)
+. ++-|++|+.| |..++ ....++.+ |...|..+++++....|++++.|++++.|..-.-.|
T Consensus 359 ~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~G-htdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~ 430 (577)
T KOG0642|consen 359 CYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLG-HTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP 430 (577)
T ss_pred EEeeccCceeeeeccCCCCCcccccCcchhccceec-cccceeeeeecccccceeeecCCceEEeeccCCcCc
Confidence 44 4689999999 44332 23446677 799999999999999999999999999998654333
No 187
>KOG1408|consensus
Probab=98.42 E-value=1.2e-06 Score=86.93 Aligned_cols=125 Identities=11% Similarity=0.156 Sum_probs=88.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d 84 (248)
||+++.++-.-+..+ -..+++++|+++|.+++ +|+-+ -...+|+||+.....+..+ +|. ..|++++|+|.
T Consensus 63 fn~~~~tQ~hlvnss-Rk~~t~vAfS~~Gryva-tGEcG-----~~pa~kVw~la~h~vVAEfvdHK--Y~vtcvaFsp~ 133 (1080)
T KOG1408|consen 63 FNVDSCTQSHLVNSS-RKPLTCVAFSQNGRYVA-TGECG-----RTPASKVWSLAFHGVVAEFVDHK--YNVTCVAFSPG 133 (1080)
T ss_pred Ecccccchhheeccc-CcceeEEEEcCCCcEEE-ecccC-----CCccceeeeeccccchhhhhhcc--ccceeeeecCC
Confidence 444444444334443 35788899988666554 44533 2458999999987655554 666 66999999998
Q ss_pred c--eeee---CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 85 Y--VLSM---DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 85 ~--l~Ss---dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
. |+|- .|=+|.+||.+..-...+-.- ...|.-+||+.||.++++++ ...|+.||+
T Consensus 134 ~kyvvSVGsQHDMIVnv~dWr~N~~~asnki--ss~Vsav~fsEdgSYfvT~g-nrHvk~wyl 193 (1080)
T KOG1408|consen 134 NKYVVSVGSQHDMIVNVNDWRVNSSGASNKI--SSVVSAVAFSEDGSYFVTSG-NRHVKLWYL 193 (1080)
T ss_pred CcEEEeeccccceEEEhhhhhhccccccccc--ceeEEEEEEccCCceeeeee-eeeEEEEEe
Confidence 7 5542 477999999885544444333 46788899999999998887 789999995
No 188
>KOG1007|consensus
Probab=98.42 E-value=1.7e-06 Score=78.24 Aligned_cols=132 Identities=11% Similarity=0.137 Sum_probs=95.6
Q ss_pred cccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEc
Q psy2083 4 QELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFH 82 (248)
Q Consensus 4 ~~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~ 82 (248)
|-.|.++.+++-+|+..|-.-|.++.|.|.-+.++++++|+ |.|+|||.|.. .|+... ++|...|.+|.|+
T Consensus 196 ~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDd-------gyvriWD~R~tk~pv~el-~~HsHWvW~VRfn 267 (370)
T KOG1007|consen 196 QFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDD-------GYVRIWDTRKTKFPVQEL-PGHSHWVWAVRFN 267 (370)
T ss_pred EEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCC-------ccEEEEeccCCCcccccc-CCCceEEEEEEec
Confidence 33566677777778766667799999999888866666664 49999999987 477665 4556899999999
Q ss_pred CCc---eee-eCCCeEEEEECCCC-----------------------------CEEEEeecCCCCCeeEEEEeCCCC-EE
Q psy2083 83 DNY---VLS-MDSSVVKIWSKDNG-----------------------------SLFTCIESGDQTQFNNLCHIPESG-MM 128 (248)
Q Consensus 83 ~d~---l~S-sdd~~IKIWD~~tG-----------------------------k~~~tie~~h~~~In~l~~~pdsg-ll 128 (248)
|.. |++ +.|..|-+|...+- ..+.+++. |...|-+++|+.-.. ++
T Consensus 268 ~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tyde-hEDSVY~~aWSsadPWiF 346 (370)
T KOG1007|consen 268 PEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDE-HEDSVYALAWSSADPWIF 346 (370)
T ss_pred CccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccc-cccceEEEeeccCCCeeE
Confidence 864 444 56777889876431 12334555 688999999987554 55
Q ss_pred EEEeCCCeEEEEEcCC
Q psy2083 129 FIANENKKILTYYIPS 144 (248)
Q Consensus 129 ~sa~ed~~I~~w~Ip~ 144 (248)
++-+-||+|-+=.+|.
T Consensus 347 ASLSYDGRviIs~V~r 362 (370)
T KOG1007|consen 347 ASLSYDGRVIISSVPR 362 (370)
T ss_pred EEeccCceEEeecCCh
Confidence 5668899998877663
No 189
>KOG2919|consensus
Probab=98.42 E-value=2.1e-06 Score=78.62 Aligned_cols=136 Identities=16% Similarity=0.204 Sum_probs=99.4
Q ss_pred cchhcCceeEEEecC-CC---CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEc-CCCc--eeE-EecC---CCCC
Q psy2083 6 LRQDKGSLFTCIESG-DQ---TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDI-RADK--PLR-VKDH---MYGL 74 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~-~~---~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDl-Rs~~--pl~-~~~h---~~~~ 74 (248)
.|+-+|++-+++.+- |. ....+++|+||+..||++ ... .|+++|+ |.|+ |.. ++.+ +-..
T Consensus 138 wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykr--------cirvFdt~RpGr~c~vy~t~~~~k~gq~g 208 (406)
T KOG2919|consen 138 WDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKR--------CIRVFDTSRPGRDCPVYTTVTKGKFGQKG 208 (406)
T ss_pred eeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccc--------eEEEeeccCCCCCCcchhhhhcccccccc
Confidence 466677777775421 12 244689999988777765 443 8999999 7774 222 2222 2224
Q ss_pred CeeEEEEcCCc----eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCCCCCCC
Q psy2083 75 PIRDIKFHDNY----VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPSLGPAP 149 (248)
Q Consensus 75 pI~sI~F~~d~----l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~lG~aP 149 (248)
-|.+++|+|.. .+.+-.+.+-|+.-..+.++..+-+ |...|+.++|.|||.-|++|.. |.+|..|||..-+ -|
T Consensus 209 iisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llgg-h~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~-~p 286 (406)
T KOG2919|consen 209 IISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGG-HGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSR-DP 286 (406)
T ss_pred eeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecc-cCCCeeeEEeccCcCeecccccCCCeEEEEeehhcc-ch
Confidence 67889999975 3445678888998888999999887 7999999999999999999986 6899999997743 34
Q ss_pred Ccc
Q psy2083 150 KWC 152 (248)
Q Consensus 150 ~wc 152 (248)
-|.
T Consensus 287 v~~ 289 (406)
T KOG2919|consen 287 VYA 289 (406)
T ss_pred hhh
Confidence 444
No 190
>KOG2106|consensus
Probab=98.42 E-value=5e-06 Score=79.75 Aligned_cols=109 Identities=15% Similarity=0.274 Sum_probs=86.0
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE---ecCCCCCCeeEEEEcCCc-eeeeC-CCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV---KDHMYGLPIRDIKFHDNY-VLSMD-SSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~---~~h~~~~pI~sI~F~~d~-l~Ssd-d~~IKIW 97 (248)
..|.-+.|.|-+-.++...+-+ ++..|+.|.+..... +...-..-|.+++|.+++ ++++| ++.|-||
T Consensus 201 e~v~~a~FHPtd~nliit~Gk~--------H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engdviTgDS~G~i~Iw 272 (626)
T KOG2106|consen 201 EVVFLATFHPTDPNLIITCGKG--------HLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGDVITGDSGGNILIW 272 (626)
T ss_pred ceEEEEEeccCCCcEEEEeCCc--------eEEEEEccCCceEEEeeccccccceEEEEEEEcCCCCEEeecCCceEEEE
Confidence 3566777888777777666664 899999998854332 222223679999999999 88886 7799999
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+..+.+....... |+..|-++|.-.+|.+ ++|+.|++|..|+
T Consensus 273 ~~~~~~~~k~~~a-H~ggv~~L~~lr~Gtl-lSGgKDRki~~Wd 314 (626)
T KOG2106|consen 273 SKGTNRISKQVHA-HDGGVFSLCMLRDGTL-LSGGKDRKIILWD 314 (626)
T ss_pred eCCCceEEeEeee-cCCceEEEEEecCccE-eecCccceEEecc
Confidence 9998888777777 7999999999888765 5699999999998
No 191
>KOG4547|consensus
Probab=98.40 E-value=5.6e-06 Score=80.18 Aligned_cols=146 Identities=8% Similarity=0.070 Sum_probs=108.9
Q ss_pred hcCceeEEEe-cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-e
Q psy2083 9 DKGSLFTCIE-SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-V 86 (248)
Q Consensus 9 ~~G~~~~~~~-~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l 86 (248)
..|++-..+. +.|.+.|+.+....+-|.+.++|.|. .|-.|+....+-+...--+ ..-+.+++.+||+ +
T Consensus 88 ~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~--------~v~~~~~~~~~~~~~~~~~-~~~~~sl~is~D~~~ 158 (541)
T KOG4547|consen 88 AGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADL--------KVVYILEKEKVIIRIWKEQ-KPLVSSLCISPDGKI 158 (541)
T ss_pred cCCeEEEEEecCCCCCcceeeecccccCceEecCCce--------eEEEEecccceeeeeeccC-CCccceEEEcCCCCE
Confidence 4566666666 66788999998888888899999886 8999999998766654222 2568899999998 7
Q ss_pred eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCC-----CCEEEEE-eCCCeEEEEEcCC---------CCCCCCc
Q psy2083 87 LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPE-----SGMMFIA-NENKKILTYYIPS---------LGPAPKW 151 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pd-----sgll~sa-~ed~~I~~w~Ip~---------lG~aP~w 151 (248)
+....++||+||+++++.+.+|++ |.++|+++.|.-+ |..+++. .-+.-|-+|.+-. =++.|.=
T Consensus 159 l~~as~~ik~~~~~~kevv~~ftg-h~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~~kkks~~~sl~~~di 237 (541)
T KOG4547|consen 159 LLTASRQIKVLDIETKEVVITFTG-HGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEKEDKKKSLSCSLTVPDI 237 (541)
T ss_pred EEeccceEEEEEccCceEEEEecC-CCcceEEEEEEEeccccccceeeeccccccceeEEEEEcccccchhheeeccCCC
Confidence 777788999999999999999998 7999999999877 5444444 4456677887543 1333333
Q ss_pred cccccchhhhhhc
Q psy2083 152 CGFLDNLTEELEE 164 (248)
Q Consensus 152 cs~ld~~tee~e~ 164 (248)
-.+.|..-+|-+.
T Consensus 238 pv~~ds~~~ed~~ 250 (541)
T KOG4547|consen 238 PVTSDSGLLEDGT 250 (541)
T ss_pred CeEeccccccccc
Confidence 4556665555444
No 192
>KOG1272|consensus
Probab=98.38 E-value=3.6e-07 Score=86.66 Aligned_cols=124 Identities=12% Similarity=0.187 Sum_probs=97.9
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-eee
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VLS 88 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~S 88 (248)
.|..+.++..+ ..|+.+.|.|-- .|++++++. |-++.-|+.+|+.+.....+. .++..++-+|-. |+.
T Consensus 199 ~GtElHClk~~--~~v~rLeFLPyH-fLL~~~~~~-------G~L~Y~DVS~GklVa~~~t~~-G~~~vm~qNP~NaVih 267 (545)
T KOG1272|consen 199 NGTELHCLKRH--IRVARLEFLPYH-FLLVAASEA-------GFLKYQDVSTGKLVASIRTGA-GRTDVMKQNPYNAVIH 267 (545)
T ss_pred CCcEEeehhhc--Cchhhhcccchh-heeeecccC-------CceEEEeechhhhhHHHHccC-CccchhhcCCccceEE
Confidence 57888888876 689999999954 444444443 489999999997665432221 356666667765 443
Q ss_pred -e-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 89 -M-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 89 -s-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
+ ..++|.+|.+..-+++..+.. |..+|+++++.|+|.++++++-|++|++||+..+
T Consensus 268 ~GhsnGtVSlWSP~skePLvKiLc-H~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~ 325 (545)
T KOG1272|consen 268 LGHSNGTVSLWSPNSKEPLVKILC-HRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNF 325 (545)
T ss_pred EcCCCceEEecCCCCcchHHHHHh-cCCCcceEEECCCCcEEeecccccceeEeeeccc
Confidence 3 688999999999999999988 6999999999999999999999999999998754
No 193
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.30 E-value=1.9e-05 Score=75.09 Aligned_cols=122 Identities=11% Similarity=0.132 Sum_probs=81.2
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-e
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-L 87 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~ 87 (248)
|...+.+..+ ...+....|+||+..++.++..+ -++.|.+||+.++++.....+. ..+....|+||+ | .
T Consensus 191 g~~~~~lt~~-~~~v~~p~wSpDG~~lay~s~~~-----g~~~i~~~dl~~g~~~~l~~~~--g~~~~~~~SPDG~~la~ 262 (435)
T PRK05137 191 GANVRYLTDG-SSLVLTPRFSPNRQEITYMSYAN-----GRPRVYLLDLETGQRELVGNFP--GMTFAPRFSPDGRKVVM 262 (435)
T ss_pred CCCcEEEecC-CCCeEeeEECCCCCEEEEEEecC-----CCCEEEEEECCCCcEEEeecCC--CcccCcEECCCCCEEEE
Confidence 4444444443 46788999999888776654432 1358999999998765444333 567789999998 3 3
Q ss_pred ee-CCC--eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CC--eEEEEEc
Q psy2083 88 SM-DSS--VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NK--KILTYYI 142 (248)
Q Consensus 88 Ss-dd~--~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~--~I~~w~I 142 (248)
++ .++ .|-+||..+|+. ..+.. +.....+.+|+|||..|+.+++ ++ +|.+|++
T Consensus 263 ~~~~~g~~~Iy~~d~~~~~~-~~Lt~-~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~ 321 (435)
T PRK05137 263 SLSQGGNTDIYTMDLRSGTT-TRLTD-SPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNA 321 (435)
T ss_pred EEecCCCceEEEEECCCCce-EEccC-CCCccCceeEcCCCCEEEEEECCCCCCeEEEEEC
Confidence 43 344 477779987765 44554 2555678999999987777664 34 4555553
No 194
>KOG4227|consensus
Probab=98.28 E-value=9.9e-06 Score=75.93 Aligned_cols=127 Identities=9% Similarity=0.126 Sum_probs=100.4
Q ss_pred hcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCC-CCCeeEEEEcCCc--
Q psy2083 9 DKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMY-GLPIRDIKFHDNY-- 85 (248)
Q Consensus 9 ~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~-~~pI~sI~F~~d~-- 85 (248)
++-+.|...+++|.++|.++.|...+..+++++.++ +|-+.|+.+...+.+..|.+ ...|..+.-||..
T Consensus 92 k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~--------~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~ 163 (609)
T KOG4227|consen 92 KTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWG--------TVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNT 163 (609)
T ss_pred cCCCCceeccCccccceEEEEEccCCeeEecCCCcc--------eeEeeecccceeeeeecccCcccceeecccCCCCce
Confidence 345788899998889999999998888888888875 99999999999888887653 4578888888864
Q ss_pred -eeeeCCCeEEEEECCCCC-EEEEeec-CCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcC
Q psy2083 86 -VLSMDSSVVKIWSKDNGS-LFTCIES-GDQTQFNNLCHIPES-GMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 -l~Ssdd~~IKIWD~~tGk-~~~tie~-~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip 143 (248)
+++++++.|-|||.+... +..-+.+ +.+....++.|+|.. .+|+++++.+-+.+|++.
T Consensus 164 ~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R 225 (609)
T KOG4227|consen 164 LIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRR 225 (609)
T ss_pred EEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeec
Confidence 566799999999998644 2222221 124677789999965 788999999999999974
No 195
>KOG2139|consensus
Probab=98.28 E-value=1.2e-05 Score=74.55 Aligned_cols=120 Identities=19% Similarity=0.293 Sum_probs=88.0
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCC----ce--------eEEe-cCCCCCCee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRAD----KP--------LRVK-DHMYGLPIR 77 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~----~p--------l~~~-~h~~~~pI~ 77 (248)
++-+.+.+-.+.+|.+++|-|-++. ++.++.. -|.+|-.... ++ ..+. +-+| .||+
T Consensus 130 t~pt~Lks~sQrnvtclawRPlsaselavgCr~---------gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVt 199 (445)
T KOG2139|consen 130 TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRA---------GICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVT 199 (445)
T ss_pred CCCceecchhhcceeEEEeccCCcceeeeeecc---------eeEEEEcCcccccccccccccccchhheeCCCC-ceee
Confidence 4555565555779999999998877 4455555 3899986432 22 2222 2233 7999
Q ss_pred EEEEcCCc--eeee--CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 78 DIKFHDNY--VLSM--DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 78 sI~F~~d~--l~Ss--dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
++.|.+|+ ++++ +|..|.|||+.+|....-.--+ ...+.-+.|+||+..||+|.-|+...+|..
T Consensus 200 smqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~g-lgg~slLkwSPdgd~lfaAt~davfrlw~e 267 (445)
T KOG2139|consen 200 SMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKG-LGGFSLLKWSPDGDVLFAATCDAVFRLWQE 267 (445)
T ss_pred EEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccC-CCceeeEEEcCCCCEEEEecccceeeeehh
Confidence 99999998 4444 6889999999998765544221 567888999999999999999999999943
No 196
>KOG1240|consensus
Probab=98.27 E-value=1.6e-05 Score=82.76 Aligned_cols=137 Identities=12% Similarity=0.179 Sum_probs=98.6
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-------ceeEEecCCCCCCeeEEEEc
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-------KPLRVKDHMYGLPIRDIKFH 82 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-------~pl~~~~h~~~~pI~sI~F~ 82 (248)
+|.+++.+..| ++.|+.++.+++.+-+|++|+++ |+||+||+|.- +.-.++. .-+.++..+.+.
T Consensus 1037 ~G~lVAhL~Eh-s~~v~k~a~s~~~~s~FvsgS~D-------GtVKvW~~~k~~~~~~s~rS~ltys-~~~sr~~~vt~~ 1107 (1431)
T KOG1240|consen 1037 RGILVAHLHEH-SSAVIKLAVSSEHTSLFVSGSDD-------GTVKVWNLRKLEGEGGSARSELTYS-PEGSRVEKVTMC 1107 (1431)
T ss_pred cceEeehhhhc-cccccceeecCCCCceEEEecCC-------ceEEEeeehhhhcCcceeeeeEEEe-ccCCceEEEEec
Confidence 68899998776 78999999999886777666665 59999999863 1223332 234678888887
Q ss_pred CCc---eeeeCCCeEEEEECCC--CCE----------------EEE----------------------------------
Q psy2083 83 DNY---VLSMDSSVVKIWSKDN--GSL----------------FTC---------------------------------- 107 (248)
Q Consensus 83 ~d~---l~Ssdd~~IKIWD~~t--Gk~----------------~~t---------------------------------- 107 (248)
+.+ ++++.||.|.+.+++- ++. +..
T Consensus 1108 ~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w 1187 (1431)
T KOG1240|consen 1108 GNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAW 1187 (1431)
T ss_pred cCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHH
Confidence 765 5567888888877653 110 000
Q ss_pred -ee--cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCcccccc
Q psy2083 108 -IE--SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLD 156 (248)
Q Consensus 108 -ie--~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld 156 (248)
++ + ...-|+++|.+|.+..+++|+..|.+-+||+.-=-|.-+||.--.
T Consensus 1188 ~lk~~~-~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~ 1238 (1431)
T KOG1240|consen 1188 RLKNQL-RHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPAR 1238 (1431)
T ss_pred hhhcCc-cccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCccc
Confidence 00 1 135689999999999999999999999999876666777775444
No 197
>KOG0290|consensus
Probab=98.27 E-value=1e-05 Score=73.35 Aligned_cols=130 Identities=15% Similarity=0.280 Sum_probs=91.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCC--c--EEEeecCceeeeecCCeeEEEEcCC--Cc--e--eE--EecCCCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESG--M--MFIANENKKILTYYIPAFYLYDIRA--DK--P--LR--VKDHMYG 73 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g--~--l~~ag~d~~~~~~~~G~V~LwDlRs--~~--p--l~--~~~h~~~ 73 (248)
++-.+|.....-.-.|.=.++.+-|.|+.. + ++++++| .+|||-+-. ++ + +. .+...|.
T Consensus 80 ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~D---------~LRlWri~~ee~~~~~~~~L~~~kns~~~ 150 (364)
T KOG0290|consen 80 LDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATSSD---------FLRLWRIGDEESRVELQSVLNNNKNSEFC 150 (364)
T ss_pred EccCCCceeccCCCCCCCCccceEecCCccccCcchhhcccC---------eEEEEeccCcCCceehhhhhccCcccccC
Confidence 444455544332111246788999998763 1 4455555 699999873 21 1 11 1334556
Q ss_pred CCeeEEEEcCCc----eeeeCCCeEEEEECCCCC---EEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCC
Q psy2083 74 LPIRDIKFHDNY----VLSMDSSVVKIWSKDNGS---LFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 74 ~pI~sI~F~~d~----l~Ssdd~~IKIWD~~tGk---~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~l 145 (248)
.|+++-.|+.-. .+||-|-++-|||+++|. ..+.+-. |..+|-+++|..+| +++++.+.||.+++||+..|
T Consensus 151 aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIA-HDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~l 229 (364)
T KOG0290|consen 151 APLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIA-HDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSL 229 (364)
T ss_pred CcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEe-cCcceeEEEeccCccceEEEecCCCcEEEEEeccc
Confidence 899999988543 455679999999999873 3566777 69999999999977 78889999999999998775
No 198
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.26 E-value=2.6e-05 Score=74.27 Aligned_cols=114 Identities=7% Similarity=0.069 Sum_probs=76.7
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-e-eCCC--eEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-S-MDSS--VVK 95 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-S-sdd~--~IK 95 (248)
...+.+.+|+||+..++.++..+ ....|.+||+.++++....... ..+..+.|+||+ |+ + +.++ .|.
T Consensus 198 ~~~~~~p~wSPDG~~la~~s~~~-----g~~~i~i~dl~~G~~~~l~~~~--~~~~~~~~SPDG~~La~~~~~~g~~~I~ 270 (429)
T PRK03629 198 PQPLMSPAWSPDGSKLAYVTFES-----GRSALVIQTLANGAVRQVASFP--RHNGAPAFSPDGSKLAFALSKTGSLNLY 270 (429)
T ss_pred CCceeeeEEcCCCCEEEEEEecC-----CCcEEEEEECCCCCeEEccCCC--CCcCCeEECCCCCEEEEEEcCCCCcEEE
Confidence 35788999999887776544321 1247999999998664433222 334578999998 33 3 2233 588
Q ss_pred EEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCC
Q psy2083 96 IWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPS 144 (248)
Q Consensus 96 IWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~ 144 (248)
+||.++|+... +.. +...+.+.+|+|||..|+.+++ ++...+|.++.
T Consensus 271 ~~d~~tg~~~~-lt~-~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~ 318 (429)
T PRK03629 271 VMDLASGQIRQ-VTD-GRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNI 318 (429)
T ss_pred EEECCCCCEEE-ccC-CCCCcCceEECCCCCEEEEEeCCCCCceEEEEEC
Confidence 99999887644 443 2567788999999997766665 45667776543
No 199
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.26 E-value=1.6e-05 Score=75.57 Aligned_cols=124 Identities=10% Similarity=0.129 Sum_probs=80.1
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-e
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-L 87 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~ 87 (248)
|...+.+-.+ ...+.+.+|+||+..++.++..+ ....|.+||++++++....... ..+....|+||+ | +
T Consensus 185 G~~~~~l~~~-~~~v~~p~wSPDG~~la~~s~~~-----~~~~I~~~dl~~g~~~~l~~~~--g~~~~~~~SPDG~~la~ 256 (427)
T PRK02889 185 GQNAQSALSS-PEPIISPAWSPDGTKLAYVSFES-----KKPVVYVHDLATGRRRVVANFK--GSNSAPAWSPDGRTLAV 256 (427)
T ss_pred CCCceEeccC-CCCcccceEcCCCCEEEEEEccC-----CCcEEEEEECCCCCEEEeecCC--CCccceEECCCCCEEEE
Confidence 4433333333 46788899999887776655432 1247999999998765443222 345689999997 3 3
Q ss_pred e-eCCCeEEEEEC--CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCC
Q psy2083 88 S-MDSSVVKIWSK--DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPS 144 (248)
Q Consensus 88 S-sdd~~IKIWD~--~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~ 144 (248)
+ +.++...||.. .++ ....+.. +.....+.+|+|||..|+..++ ++...+|.++.
T Consensus 257 ~~~~~g~~~Iy~~d~~~~-~~~~lt~-~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~ 315 (427)
T PRK02889 257 ALSRDGNSQIYTVNADGS-GLRRLTQ-SSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPA 315 (427)
T ss_pred EEccCCCceEEEEECCCC-CcEECCC-CCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEEC
Confidence 3 45777677654 444 3556655 2445567899999987776654 46777777653
No 200
>KOG2394|consensus
Probab=98.25 E-value=4.7e-06 Score=80.43 Aligned_cols=113 Identities=15% Similarity=0.287 Sum_probs=81.2
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC----------------------------ceeEEecCCCCC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD----------------------------KPLRVKDHMYGL 74 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~----------------------------~pl~~~~h~~~~ 74 (248)
..|+.+.+-|.+..+|.+.-.. |...+||..-. .|+...... ..
T Consensus 220 tsvT~ikWvpg~~~~Fl~a~~s-------Gnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~-~g 291 (636)
T KOG2394|consen 220 SSVTCIKWVPGSDSLFLVAHAS-------GNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIG-EG 291 (636)
T ss_pred cceEEEEEEeCCCceEEEEEec-------CceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEec-cc
Confidence 4677777777666666554433 57888865321 111111111 24
Q ss_pred CeeEEEEcCCc--eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 75 PIRDIKFHDNY--VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 75 pI~sI~F~~d~--l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+|+..+|+||+ +++ +.|+.+||+|-.+-+++..+.. .-..+.||||+|||.+|++|+||--|.+|..+.
T Consensus 292 ~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkS-YFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~e 363 (636)
T KOG2394|consen 292 SINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKS-YFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEE 363 (636)
T ss_pred cccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHh-hccceEEEEEcCCccEEEecCCcceEEEEEecc
Confidence 78899999998 555 6899999999998777766654 235799999999999999999999999998754
No 201
>KOG1188|consensus
Probab=98.24 E-value=2.4e-06 Score=78.54 Aligned_cols=122 Identities=15% Similarity=0.305 Sum_probs=87.5
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC---cee-EEecCCCCCCeeEEEEcCCc---e
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD---KPL-RVKDHMYGLPIRDIKFHDNY---V 86 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~---~pl-~~~~h~~~~pI~sI~F~~d~---l 86 (248)
++.+...|.+.|+.++|.|.+-.++.+|+-+ |-|-|||+... .+| .+..| +..|.+|.|+.++ |
T Consensus 157 l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvD-------GLvnlfD~~~d~EeDaL~~viN~--~sSI~~igw~~~~ykrI 227 (376)
T KOG1188|consen 157 LRQLNESHNDDVTQLRFHPSDPNLLLSGSVD-------GLVNLFDTKKDNEEDALLHVINH--GSSIHLIGWLSKKYKRI 227 (376)
T ss_pred hhhhhhhccCcceeEEecCCCCCeEEeeccc-------ceEEeeecCCCcchhhHHHhhcc--cceeeeeeeecCCcceE
Confidence 5554444479999999999877755544443 59999999876 233 33444 4789999999876 5
Q ss_pred ee-eCCCeEEEEECCCCCEEEEee--------------------------------------------------------
Q psy2083 87 LS-MDSSVVKIWSKDNGSLFTCIE-------------------------------------------------------- 109 (248)
Q Consensus 87 ~S-sdd~~IKIWD~~tGk~~~tie-------------------------------------------------------- 109 (248)
.+ +...+.++|+.+.|.+.+.++
T Consensus 228 ~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~ 307 (376)
T KOG1188|consen 228 MCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTE 307 (376)
T ss_pred EEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecccCCCcceEEEeccccCceeEEEeeecccccccCc
Confidence 55 467888999988776644432
Q ss_pred -----cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 110 -----SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 110 -----~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++|..-|++++|...+.++++|+||+.+.+|-.+.
T Consensus 308 ~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~~d 347 (376)
T KOG1188|consen 308 PAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKVED 347 (376)
T ss_pred cccccCCcHHHHHHHhhhcccceeeccCCCceEEEEecCC
Confidence 12334466677777778999999999999998654
No 202
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.22 E-value=2e-05 Score=74.95 Aligned_cols=106 Identities=9% Similarity=0.035 Sum_probs=70.5
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--ee-eeCCCeEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSSVVKIW 97 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIW 97 (248)
...+....|+||+..++.+++.+ |...||++... .......+. . ..+.|+|++ |+ ++.++++ +|
T Consensus 291 ~~~~~~~~wSpDG~~i~f~s~~~-------g~~~I~~~~~~~~~~~~l~~~--~--~~~~~SpDG~~ia~~~~~~i~-~~ 358 (429)
T PRK01742 291 AGNNTEPSWSPDGQSILFTSDRS-------GSPQVYRMSASGGGASLVGGR--G--YSAQISADGKTLVMINGDNVV-KQ 358 (429)
T ss_pred CCCcCCEEECCCCCEEEEEECCC-------CCceEEEEECCCCCeEEecCC--C--CCccCCCCCCEEEEEcCCCEE-EE
Confidence 35677899999887766555433 47888887543 222222332 2 457899997 43 4456555 59
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
|..+|+... +.. .....++.|+|||.+|+.++.++.+.+|++
T Consensus 359 Dl~~g~~~~-lt~--~~~~~~~~~sPdG~~i~~~s~~g~~~~l~~ 400 (429)
T PRK01742 359 DLTSGSTEV-LSS--TFLDESPSISPNGIMIIYSSTQGLGKVLQL 400 (429)
T ss_pred ECCCCCeEE-ecC--CCCCCCceECCCCCEEEEEEcCCCceEEEE
Confidence 999987643 322 223456789999999999999988887774
No 203
>KOG2321|consensus
Probab=98.21 E-value=6.2e-06 Score=80.14 Aligned_cols=128 Identities=14% Similarity=0.233 Sum_probs=92.8
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec-------CCC---CC
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-------HMY---GL 74 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-------h~~---~~ 74 (248)
.||..+|+.+..++.. .+.+|.|...+..|++++|+.++ .|-.||.|...-+.+.+ |.. ..
T Consensus 159 RlNLEqGrfL~P~~~~-~~~lN~v~in~~hgLla~Gt~~g--------~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~ 229 (703)
T KOG2321|consen 159 RLNLEQGRFLNPFETD-SGELNVVSINEEHGLLACGTEDG--------VVEFWDPRDKSRVGTLDAASSVNSHPGGDAAP 229 (703)
T ss_pred EEEccccccccccccc-cccceeeeecCccceEEecccCc--------eEEEecchhhhhheeeecccccCCCccccccC
Confidence 3788899999998875 57899998899888766665564 89999999874333221 111 12
Q ss_pred CeeEEEEcCCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCE-EEEEeCCCeEEEEE
Q psy2083 75 PIRDIKFHDNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYY 141 (248)
Q Consensus 75 pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgl-l~sa~ed~~I~~w~ 141 (248)
.|++|+|..++ .++...|.|-|+|+++.+++-.=..+...+|..+.|.+.++. -++..+...+++|+
T Consensus 230 svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiWd 300 (703)
T KOG2321|consen 230 SVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSMDKRILKIWD 300 (703)
T ss_pred cceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEecchHHhhhcc
Confidence 49999999987 445678899999999998875543223579999999886433 33444557789997
No 204
>KOG1587|consensus
Probab=98.20 E-value=2.5e-05 Score=77.02 Aligned_cols=117 Identities=16% Similarity=0.212 Sum_probs=82.6
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc-----eeEEecCCCCCCeeEEEEcCCc---
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK-----PLRVKDHMYGLPIRDIKFHDNY--- 85 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~-----pl~~~~h~~~~pI~sI~F~~d~--- 85 (248)
...++. ++.|..++|.|.+..++++|... |+|.+||+|.+. ++....|.|..||+.+.|..+.
T Consensus 236 e~~~~~--~s~v~~~~f~p~~p~ll~gG~y~-------GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~ 306 (555)
T KOG1587|consen 236 ELVLES--PSEVTCLKFCPFDPNLLAGGCYN-------GQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNT 306 (555)
T ss_pred eEEEec--CCceeEEEeccCCcceEEeeccC-------ceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCC
Confidence 334444 47899999999999988888775 699999999872 2445678888999999997653
Q ss_pred --eeeeCCCeEEEEECCCCCE------EEEee-----cCCCCCeeEEEEeC-CCCEEEEEeCCCeEEE
Q psy2083 86 --VLSMDSSVVKIWSKDNGSL------FTCIE-----SGDQTQFNNLCHIP-ESGMMFIANENKKILT 139 (248)
Q Consensus 86 --l~Ssdd~~IKIWD~~tGk~------~~tie-----~~h~~~In~l~~~p-dsgll~sa~ed~~I~~ 139 (248)
+.++.|+.|+.|+++.-.. ..... ......++++.|.| +-..+++|++.|.|..
T Consensus 307 ~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~ 374 (555)
T KOG1587|consen 307 EFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYK 374 (555)
T ss_pred ceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEE
Confidence 4456799999999874221 11111 01134677888876 3366777788887765
No 205
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.19 E-value=0.00011 Score=69.12 Aligned_cols=128 Identities=13% Similarity=0.190 Sum_probs=85.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|..+.+.+..++.+. ..-..++|+||+.++++++.|+ .|.++|+.+.+.+....-+ ..-.++++++|+
T Consensus 21 iD~~t~~~~~~i~~~~-~~h~~~~~s~Dgr~~yv~~rdg--------~vsviD~~~~~~v~~i~~G--~~~~~i~~s~DG 89 (369)
T PF02239_consen 21 IDGATNKVVARIPTGG-APHAGLKFSPDGRYLYVANRDG--------TVSVIDLATGKVVATIKVG--GNPRGIAVSPDG 89 (369)
T ss_dssp EETTT-SEEEEEE-ST-TEEEEEE-TT-SSEEEEEETTS--------EEEEEETTSSSEEEEEE-S--SEEEEEEE--TT
T ss_pred EECCCCeEEEEEcCCC-CceeEEEecCCCCEEEEEcCCC--------eEEEEECCcccEEEEEecC--CCcceEEEcCCC
Confidence 6788899999999762 2234567788888888887764 8999999999977665444 456889999998
Q ss_pred --ee-ee-CCCeEEEEECCCCCEEEEeecC------CCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCC
Q psy2083 86 --VL-SM-DSSVVKIWSKDNGSLFTCIESG------DQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPS 144 (248)
Q Consensus 86 --l~-Ss-dd~~IKIWD~~tGk~~~tie~~------h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~ 144 (248)
++ ++ ..+.+.|+|.++.+++.++..+ ....+..+..+|....++++. +.++|.+-+...
T Consensus 90 ~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d 159 (369)
T PF02239_consen 90 KYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSD 159 (369)
T ss_dssp TEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTT
T ss_pred CEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEecc
Confidence 44 33 6899999999999999998751 023456677788888666555 458777666444
No 206
>KOG1517|consensus
Probab=98.18 E-value=2.2e-05 Score=80.79 Aligned_cols=113 Identities=16% Similarity=0.164 Sum_probs=78.7
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce---eEE-ecCCCCCCeeEEEEcCCc---ee-eeCCCeE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP---LRV-KDHMYGLPIRDIKFHDNY---VL-SMDSSVV 94 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p---l~~-~~h~~~~pI~sI~F~~d~---l~-Ssdd~~I 94 (248)
..|+.+...-..|.++++|-. ||.|++||.|...| +.. +.|.-..||..+.+.+.+ ++ +|.+|.|
T Consensus 1209 t~vTaLS~~~~~gn~i~AGfa-------DGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I 1281 (1387)
T KOG1517|consen 1209 TLVTALSADLVHGNIIAAGFA-------DGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDI 1281 (1387)
T ss_pred ccceeecccccCCceEEEeec-------CCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeE
Confidence 344554444444555555444 46999999998744 333 567644569999999876 44 4689999
Q ss_pred EEEECCCCC--EEEEeecCC--CCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 95 KIWSKDNGS--LFTCIESGD--QTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 95 KIWD~~tGk--~~~tie~~h--~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++||++... .+-++..+- .+.++++.++++..++++|+. +.|++|+..
T Consensus 1282 ~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~ 1333 (1387)
T KOG1517|consen 1282 QLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLS 1333 (1387)
T ss_pred EEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecC
Confidence 999999632 222222210 135999999999999999998 999999864
No 207
>KOG1587|consensus
Probab=98.18 E-value=6.2e-06 Score=81.23 Aligned_cols=113 Identities=9% Similarity=0.115 Sum_probs=88.9
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC-CCceeEEecCCCCCCeeEEEEcCCc---eeee-CCCeEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR-ADKPLRVKDHMYGLPIRDIKFHDNY---VLSM-DSSVVKI 96 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR-s~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss-dd~~IKI 96 (248)
-+.|+.+.++|-+-.+|.+++|- +|+||.-- ...|+..++.. -..|.+++|+|.- .++. ++|.|-|
T Consensus 398 ~g~v~~v~~nPF~~k~fls~gDW--------~vriWs~~~~~~Pl~~~~~~-~~~v~~vaWSptrpavF~~~d~~G~l~i 468 (555)
T KOG1587|consen 398 IGPVYAVSRNPFYPKNFLSVGDW--------TVRIWSEDVIASPLLSLDSS-PDYVTDVAWSPTRPAVFATVDGDGNLDI 468 (555)
T ss_pred CcceEeeecCCCccceeeeeccc--------eeEeccccCCCCcchhhhhc-cceeeeeEEcCcCceEEEEEcCCCceeh
Confidence 57899999999877788777775 89999988 56888776432 2569999999986 4444 5999999
Q ss_pred EECCC--CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 97 WSKDN--GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 97 WD~~t--Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
||+.. -++..+... +....+.+.++++|.+|++|.+.|++++|.++.
T Consensus 469 WDLl~~~~~Pv~s~~~-~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 469 WDLLQDDEEPVLSQKV-CSPALTRVRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred hhhhccccCCcccccc-cccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence 99874 456666655 245667788888899999999999999999963
No 208
>KOG2695|consensus
Probab=98.13 E-value=6.5e-06 Score=76.00 Aligned_cols=123 Identities=14% Similarity=0.172 Sum_probs=86.4
Q ss_pred cCceeEEEecCCCC------CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-----ceeEEecCCCCCCeeE
Q psy2083 10 KGSLFTCIESGDQT------QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-----KPLRVKDHMYGLPIRD 78 (248)
Q Consensus 10 ~G~~~~~~~~~~~~------~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-----~pl~~~~h~~~~pI~s 78 (248)
.+..++..+++|+. .|-...|...+.+++.++.+ |.|..+|+|.+ -|.+...|+ ..|++
T Consensus 234 qqv~L~nvetg~~qsf~sksDVfAlQf~~s~nLv~~GcRn--------geI~~iDLR~rnqG~~~~a~rlyh~--Ssvts 303 (425)
T KOG2695|consen 234 QQVLLTNVETGHQQSFQSKSDVFALQFAGSDNLVFNGCRN--------GEIFVIDLRCRNQGNGWCAQRLYHD--SSVTS 303 (425)
T ss_pred ceeEEEEeecccccccccchhHHHHHhcccCCeeEecccC--------CcEEEEEeeecccCCCcceEEEEcC--cchhh
Confidence 34466666666533 45555555544456666666 49999999986 355666676 78888
Q ss_pred EEEc---CCc-eeeeCCCeEEEEECCCCCE---EEEeecCCCC--CeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 79 IKFH---DNY-VLSMDSSVVKIWSKDNGSL---FTCIESGDQT--QFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 79 I~F~---~d~-l~Ssdd~~IKIWD~~tGk~---~~tie~~h~~--~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+.-. ... ++|+.++.||+||.+--++ +.++++ |.. .-+-+.+.|..|.|+++++|.-.++|-+.
T Consensus 304 lq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeG-HvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~ 376 (425)
T KOG2695|consen 304 LQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEG-HVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLD 376 (425)
T ss_pred hhhhccccceEeeccCcCceeEeeehhhhcccceeeeec-ccccccccccccccccceEEEccCeeEEEEEecc
Confidence 7644 344 5555699999999987666 889998 332 22335567888999999999999999876
No 209
>KOG0644|consensus
Probab=98.13 E-value=1.9e-06 Score=86.56 Aligned_cols=106 Identities=9% Similarity=0.271 Sum_probs=84.6
Q ss_pred CCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc--eee-eCCCeEEE
Q psy2083 22 QTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY--VLS-MDSSVVKI 96 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKI 96 (248)
-..|.+++|.. +|. ++++++|- .||+|-+.+...+.. .+|. ..|++++.+.+. +++ |.|.+|++
T Consensus 190 ~naVyca~fDr-tg~~Iitgsdd~--------lvKiwS~et~~~lAs~rGhs--~ditdlavs~~n~~iaaaS~D~vIrv 258 (1113)
T KOG0644|consen 190 RNAVYCAIFDR-TGRYIITGSDDR--------LVKIWSMETARCLASCRGHS--GDITDLAVSSNNTMIAAASNDKVIRV 258 (1113)
T ss_pred hhheeeeeecc-ccceEeecCccc--------eeeeeeccchhhhccCCCCc--cccchhccchhhhhhhhcccCceEEE
Confidence 45666666555 555 55555554 899999999887765 4555 889999988776 444 68999999
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
|-+.+|.++..+.+ |...|+.++|+|-- +.++|+++.+|+..
T Consensus 259 Wrl~~~~pvsvLrg-htgavtaiafsP~~----sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 259 WRLPDGAPVSVLRG-HTGAVTAIAFSPRA----SSSDDGTCRIWDAR 300 (1113)
T ss_pred EecCCCchHHHHhc-cccceeeeccCccc----cCCCCCceEecccc
Confidence 99999999999998 79999999999965 67889999999854
No 210
>KOG1538|consensus
Probab=98.11 E-value=4.8e-06 Score=82.23 Aligned_cols=121 Identities=11% Similarity=0.121 Sum_probs=94.6
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|...|.+++++.+| .+.|++++++.+|...+++++|. .|-+|.-.-. -+..+.|+ ..|.+..|+|-.
T Consensus 38 yD~ndG~llqtLKgH-KDtVycVAys~dGkrFASG~aDK--------~VI~W~~klE-G~LkYSH~--D~IQCMsFNP~~ 105 (1081)
T KOG1538|consen 38 YDTSDGTLLQPLKGH-KDTVYCVAYAKDGKRFASGSADK--------SVIIWTSKLE-GILKYSHN--DAIQCMSFNPIT 105 (1081)
T ss_pred EeCCCcccccccccc-cceEEEEEEccCCceeccCCCce--------eEEEeccccc-ceeeeccC--CeeeEeecCchH
Confidence 678889999999987 89999999999766555555565 8999976543 24556666 899999999976
Q ss_pred --eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 86 --VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 86 --l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
++|+.-.-.-+|.++ .+.+..... .+.+++++|..||.+++.|.-+|+|.+-.
T Consensus 106 h~LasCsLsdFglWS~~-qK~V~K~ks--s~R~~~CsWtnDGqylalG~~nGTIsiRN 160 (1081)
T KOG1538|consen 106 HQLASCSLSDFGLWSPE-QKSVSKHKS--SSRIICCSWTNDGQYLALGMFNGTISIRN 160 (1081)
T ss_pred HHhhhcchhhccccChh-hhhHHhhhh--heeEEEeeecCCCcEEEEeccCceEEeec
Confidence 666654455699987 345555555 67899999999999999999999997763
No 211
>KOG1524|consensus
Probab=98.11 E-value=6.9e-06 Score=79.40 Aligned_cols=121 Identities=12% Similarity=0.123 Sum_probs=87.3
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL 87 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~ 87 (248)
+|+.-.+++.| .+.|.+-.++|||.-|+++|+|+ .|++|- |+|. +...--+++.+|.+++|.|+. |+
T Consensus 93 ~~rVE~sv~AH-~~A~~~gRW~~dGtgLlt~GEDG--------~iKiWS-rsGM-LRStl~Q~~~~v~c~~W~p~S~~vl 161 (737)
T KOG1524|consen 93 SARVERSISAH-AAAISSGRWSPDGAGLLTAGEDG--------VIKIWS-RSGM-LRSTVVQNEESIRCARWAPNSNSIV 161 (737)
T ss_pred cchhhhhhhhh-hhhhhhcccCCCCceeeeecCCc--------eEEEEe-ccch-HHHHHhhcCceeEEEEECCCCCceE
Confidence 45555666666 68888888999887799999985 899996 4442 221112445899999999997 44
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
=+..+.+-|=-+.-....-.+.. |..-|-++.|+|.+.+|++|+||-+.++||-
T Consensus 162 ~c~g~h~~IKpL~~n~k~i~WkA-HDGiiL~~~W~~~s~lI~sgGED~kfKvWD~ 215 (737)
T KOG1524|consen 162 FCQGGHISIKPLAANSKIIRWRA-HDGLVLSLSWSTQSNIIASGGEDFRFKIWDA 215 (737)
T ss_pred EecCCeEEEeecccccceeEEec-cCcEEEEeecCccccceeecCCceeEEeecc
Confidence 44333333433333333445667 6888999999999999999999999999984
No 212
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.10 E-value=6.1e-05 Score=71.62 Aligned_cols=123 Identities=11% Similarity=0.088 Sum_probs=79.6
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-e
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-L 87 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~ 87 (248)
|.....+-.+ ...+.+..|+||+..++.++..+ ....|.+||+.++++....... ....+..|+||+ | +
T Consensus 193 g~~~~~lt~~-~~~v~~p~wSpDg~~la~~s~~~-----~~~~l~~~dl~~g~~~~l~~~~--g~~~~~~~SpDG~~l~~ 264 (433)
T PRK04922 193 GYNPQTILRS-AEPILSPAWSPDGKKLAYVSFER-----GRSAIYVQDLATGQRELVASFR--GINGAPSFSPDGRRLAL 264 (433)
T ss_pred CCCceEeecC-CCccccccCCCCCCEEEEEecCC-----CCcEEEEEECCCCCEEEeccCC--CCccCceECCCCCEEEE
Confidence 4433344333 35678889999888777665432 1347999999988765443332 344578999998 3 3
Q ss_pred e-eCC--CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcC
Q psy2083 88 S-MDS--SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIP 143 (248)
Q Consensus 88 S-sdd--~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip 143 (248)
+ +.+ ..|.+||..+|+. ..+.. +.....+.+|+|||..|+.+++ ++...+|.+.
T Consensus 265 ~~s~~g~~~Iy~~d~~~g~~-~~lt~-~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~d 322 (433)
T PRK04922 265 TLSRDGNPEIYVMDLGSRQL-TRLTN-HFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVA 322 (433)
T ss_pred EEeCCCCceEEEEECCCCCe-EECcc-CCCCccceEECCCCCEEEEEECCCCCceEEEEE
Confidence 3 333 3699999998875 44554 2444567899999987776664 4555555443
No 213
>KOG0642|consensus
Probab=98.10 E-value=1.4e-05 Score=77.33 Aligned_cols=118 Identities=9% Similarity=0.222 Sum_probs=90.7
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeE--E-ecCCCC------------------
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLR--V-KDHMYG------------------ 73 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~--~-~~h~~~------------------ 73 (248)
.++.+| .+.|+.+.+++....|+++++|+ ||++|+.-...|.. . +.|++-
T Consensus 390 ~~l~Gh-tdavw~l~~s~~~~~Llscs~Dg--------Tvr~w~~~~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~ 460 (577)
T KOG0642|consen 390 GTLLGH-TDAVWLLALSSTKDRLLSCSSDG--------TVRLWEPTEESPCTFGEPKEHGYPLSVDRTSSRPAHSLASFR 460 (577)
T ss_pred cceecc-ccceeeeeecccccceeeecCCc--------eEEeeccCCcCccccCCccccCCcceEeeccchhHhhhhhcc
Confidence 345555 78899999988766687877774 99999988776611 1 122210
Q ss_pred -----------------------------CCeeEEEEcCCc--eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEE
Q psy2083 74 -----------------------------LPIRDIKFHDNY--VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCH 121 (248)
Q Consensus 74 -----------------------------~pI~sI~F~~d~--l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~ 121 (248)
.-|+.|..+|.. .++ -.++.||+.|-.+|+++..... |...++++++
T Consensus 461 ~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a-~~~svtslai 539 (577)
T KOG0642|consen 461 FGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVA-HKDSVTSLAI 539 (577)
T ss_pred cccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccchheee-ccceecceee
Confidence 125556666665 334 4799999999999999999998 6899999999
Q ss_pred eCCCCEEEEEeCCCeEEEEEc
Q psy2083 122 IPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 122 ~pdsgll~sa~ed~~I~~w~I 142 (248)
.|+|..|++++-|+.+.+|-+
T Consensus 540 ~~ng~~l~s~s~d~sv~l~kl 560 (577)
T KOG0642|consen 540 DPNGPYLMSGSHDGSVRLWKL 560 (577)
T ss_pred cCCCceEEeecCCceeehhhc
Confidence 999999999999999999964
No 214
>KOG2139|consensus
Probab=98.09 E-value=3.6e-05 Score=71.54 Aligned_cols=104 Identities=12% Similarity=0.232 Sum_probs=76.7
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC--ceeEEecCCCCCCeeEEEEcCCc--ee-eeCCCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD--KPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~--~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIW 97 (248)
..|++..+.+|++.+++++-++. .|.|||..++ .|+.-+.- ..+.-+.|+||+ +. +.-|++.++|
T Consensus 196 ~pVtsmqwn~dgt~l~tAS~gss-------si~iWdpdtg~~~pL~~~gl---gg~slLkwSPdgd~lfaAt~davfrlw 265 (445)
T KOG2139|consen 196 NPVTSMQWNEDGTILVTASFGSS-------SIMIWDPDTGQKIPLIPKGL---GGFSLLKWSPDGDVLFAATCDAVFRLW 265 (445)
T ss_pred ceeeEEEEcCCCCEEeecccCcc-------eEEEEcCCCCCcccccccCC---CceeeEEEcCCCCEEEEecccceeeee
Confidence 68999999999888888877653 8999999988 45554432 468899999998 44 4579999999
Q ss_pred ECC-CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEE
Q psy2083 98 SKD-NGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKIL 138 (248)
Q Consensus 98 D~~-tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~ 138 (248)
+.. +-....-+.+ +..|...|++|+|..|+.++. ...+.
T Consensus 266 ~e~q~wt~erw~lg--sgrvqtacWspcGsfLLf~~sgsp~ly 306 (445)
T KOG2139|consen 266 QENQSWTKERWILG--SGRVQTACWSPCGSFLLFACSGSPRLY 306 (445)
T ss_pred hhcccceecceecc--CCceeeeeecCCCCEEEEEEcCCceEE
Confidence 654 3333333444 569999999999977666654 44544
No 215
>KOG2445|consensus
Probab=98.09 E-value=5.1e-05 Score=69.20 Aligned_cols=121 Identities=12% Similarity=0.257 Sum_probs=82.7
Q ss_pred eeEEEecCCCCCeeEEEEeCC-CCc-EEEeecCceeeeecCCeeEEEEcCCCceeEE--ecC----------CCCCCeeE
Q psy2083 13 LFTCIESGDQTQFNNLCHIPE-SGM-MFIANENKKILTYYIPAFYLYDIRADKPLRV--KDH----------MYGLPIRD 78 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~-~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~--~~h----------~~~~pI~s 78 (248)
..+++-.. .+.|.+++|.|. -|+ +++++.| |++|||+.=.+-.+.. ..| .+..+--+
T Consensus 104 ~~ttl~Ds-rssV~DV~FaP~hlGLklA~~~aD--------G~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~C 174 (361)
T KOG2445|consen 104 RRTTLVDS-RSSVTDVKFAPKHLGLKLAAASAD--------GILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFC 174 (361)
T ss_pred EEEEeecC-CcceeEEEecchhcceEEEEeccC--------cEEEEEecCCccccccchhhhhhhhccCCcccccCcceE
Confidence 34555444 578999999985 234 4455555 4999999866533221 111 23467889
Q ss_pred EEEcCCc------eeeeCC-----CeEEEEECCCCC----EEEEeecCCCCCeeEEEEeCCCC----EEEEEeCCCeEEE
Q psy2083 79 IKFHDNY------VLSMDS-----SVVKIWSKDNGS----LFTCIESGDQTQFNNLCHIPESG----MMFIANENKKILT 139 (248)
Q Consensus 79 I~F~~d~------l~Ssdd-----~~IKIWD~~tGk----~~~tie~~h~~~In~l~~~pdsg----ll~sa~ed~~I~~ 139 (248)
|.|++.- ++++++ +.++||....+. .+.++.. |..+|++++|.|+-| +|++|+-|| |++
T Consensus 175 vsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d-~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I 252 (361)
T KOG2445|consen 175 VSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPD-HTDPIRDISWAPNIGRSYHLLAVATKDG-VRI 252 (361)
T ss_pred EeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCC-CCCcceeeeeccccCCceeeEEEeecCc-EEE
Confidence 9998763 444544 478899876532 2334444 789999999999775 799999999 999
Q ss_pred EEcCC
Q psy2083 140 YYIPS 144 (248)
Q Consensus 140 w~Ip~ 144 (248)
|-|..
T Consensus 253 ~~v~~ 257 (361)
T KOG2445|consen 253 FKVKV 257 (361)
T ss_pred EEEee
Confidence 98753
No 216
>KOG0644|consensus
Probab=98.09 E-value=1.1e-06 Score=88.31 Aligned_cols=126 Identities=10% Similarity=0.148 Sum_probs=89.6
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCce
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNYV 86 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~l 86 (248)
.+.++.++++.-+| ++.++..+.+..+-++++++.|. .|++|-++.+.|+.+. .+|.+.|++|+|+|-.
T Consensus 218 S~et~~~lAs~rGh-s~ditdlavs~~n~~iaaaS~D~--------vIrvWrl~~~~pvsvL-rghtgavtaiafsP~~- 286 (1113)
T KOG0644|consen 218 SMETARCLASCRGH-SGDITDLAVSSNNTMIAAASNDK--------VIRVWRLPDGAPVSVL-RGHTGAVTAIAFSPRA- 286 (1113)
T ss_pred eccchhhhccCCCC-ccccchhccchhhhhhhhcccCc--------eEEEEecCCCchHHHH-hccccceeeeccCccc-
Confidence 35678888887776 79999999998776666666665 7999999999998774 2445999999999965
Q ss_pred eeeCCCeEEEEECCCCCEEEEe----ecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 87 LSMDSSVVKIWSKDNGSLFTCI----ESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~tGk~~~ti----e~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+|++|++++|||.+ -.+.... .+....-+-++-|..++.-++++++|+.-..|-++.
T Consensus 287 sss~dgt~~~wd~r-~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~ 347 (1113)
T KOG0644|consen 287 SSSDDGTCRIWDAR-LEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQ 347 (1113)
T ss_pred cCCCCCceEecccc-ccccccCCCCCCcccccceeeeeccccccccccccCCcccccchhhH
Confidence 66899999999998 1111111 000012334455556666777777777777776654
No 217
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.08 E-value=1.1e-05 Score=50.38 Aligned_cols=39 Identities=10% Similarity=0.325 Sum_probs=33.7
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEE
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYD 58 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwD 58 (248)
|+++.++.+| ++.|+++++.|++..+++++.|+ +|++||
T Consensus 1 g~~~~~~~~h-~~~i~~i~~~~~~~~~~s~~~D~--------~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGH-SSSINSIAWSPDGNFLASGSSDG--------TIRVWD 39 (39)
T ss_dssp EEEEEEEESS-SSSEEEEEEETTSSEEEEEETTS--------EEEEEE
T ss_pred CeEEEEEcCC-CCcEEEEEEecccccceeeCCCC--------EEEEEC
Confidence 5678888887 79999999999987788888775 999998
No 218
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.07 E-value=9.9e-05 Score=71.97 Aligned_cols=164 Identities=9% Similarity=0.128 Sum_probs=102.5
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCce--eEEecCCCCCCeeEEEEcCCc---
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKP--LRVKDHMYGLPIRDIKFHDNY--- 85 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~p--l~~~~h~~~~pI~sI~F~~d~--- 85 (248)
+.+.++... .....+.|+-.... +.++.-.-..-|...-.-.+|++-.++. +.+..-....+|.+++++|+.
T Consensus 197 EvL~yirTE--~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kL 274 (545)
T PF11768_consen 197 EVLSYIRTE--NDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKL 274 (545)
T ss_pred EEEEEEEec--CCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCcccceE
Confidence 466666664 45578888754444 4444211000011122456788766543 333222334789999999986
Q ss_pred eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhcc
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEEN 165 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~ 165 (248)
++++.|+.|.+||...+....+ .. .-.++.++|+|+|.++++|++.|.+++||+. |+|.+ +..+.||..
T Consensus 275 vlGC~DgSiiLyD~~~~~t~~~-ka--~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A-Lspi~-----~qLlsEd~~-- 343 (545)
T PF11768_consen 275 VLGCEDGSIILYDTTRGVTLLA-KA--EFIPTLIAWHPDGAIFVVGSEQGELQCFDMA-LSPIK-----MQLLSEDAT-- 343 (545)
T ss_pred EEEecCCeEEEEEcCCCeeeee-ee--cccceEEEEcCCCcEEEEEcCCceEEEEEee-cCccc-----eeeccccCC--
Confidence 8889999999999987643322 33 5678899999999999999999999999974 34432 555556444
Q ss_pred ccccccCCceeecHhHHhhcCCc
Q psy2083 166 IIENVYDDYKFVTRQELEDLGLG 188 (248)
Q Consensus 166 ~~~~~yd~y~fvt~~~l~~l~~~ 188 (248)
+..++-=.-.|.+...|..+.-.
T Consensus 344 P~~~L~Ls~yf~~~~~L~~iqW~ 366 (545)
T PF11768_consen 344 PKSTLQLSKYFRVSSSLVHIQWA 366 (545)
T ss_pred CccEEeeehhccCcchhheeEec
Confidence 22222222335666666665443
No 219
>KOG0771|consensus
Probab=98.03 E-value=3.5e-05 Score=72.25 Aligned_cols=114 Identities=11% Similarity=0.151 Sum_probs=84.6
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec-CCC----------------------------
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-HMY---------------------------- 72 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~---------------------------- 72 (248)
.+.|.++.|+||+..|++.|.+ ..++||++++.++..+. ..-
T Consensus 186 ~~eV~DL~FS~dgk~lasig~d---------~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~ 256 (398)
T KOG0771|consen 186 HAEVKDLDFSPDGKFLASIGAD---------SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGG 256 (398)
T ss_pred cCccccceeCCCCcEEEEecCC---------ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCC
Confidence 3899999999998889988888 48999999984443332 000
Q ss_pred ------------------------CCCeeEEEEcCCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC
Q psy2083 73 ------------------------GLPIRDIKFHDNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES 125 (248)
Q Consensus 73 ------------------------~~pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds 125 (248)
...|.+++.++++ .+++.++.|-|++..+=+.+.-+.--|..-|+.+.|+||+
T Consensus 257 ~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pds 336 (398)
T KOG0771|consen 257 GVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDS 336 (398)
T ss_pred ceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCc
Confidence 0145556666666 4456788888888876665555442268899999999999
Q ss_pred CEEEEEeCCCeEEEEEcCC
Q psy2083 126 GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 126 gll~sa~ed~~I~~w~Ip~ 144 (248)
+.+++-+.+.++.+.-|+.
T Consensus 337 r~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 337 RYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred CcccccccCCceeEEEEee
Confidence 9999999898888887765
No 220
>KOG0650|consensus
Probab=98.01 E-value=0.00012 Score=71.76 Aligned_cols=114 Identities=9% Similarity=0.171 Sum_probs=77.2
Q ss_pred EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eeeeCC
Q psy2083 16 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLSMDS 91 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~Ssdd 91 (248)
.+-+ |.+.|.++...|.+.+|++|+.| |+||||.|++++++.+.... ..|.+|+|+|.. |+.+..
T Consensus 395 vyrG-Htg~Vr~iSvdp~G~wlasGsdD--------GtvriWEi~TgRcvr~~~~d--~~I~~vaw~P~~~~~vLAvA~~ 463 (733)
T KOG0650|consen 395 VYRG-HTGLVRSISVDPSGEWLASGSDD--------GTVRIWEIATGRCVRTVQFD--SEIRSVAWNPLSDLCVLAVAVG 463 (733)
T ss_pred eEec-cCCeEEEEEecCCcceeeecCCC--------CcEEEEEeecceEEEEEeec--ceeEEEEecCCCCceeEEEEec
Confidence 3444 48999999988866556665555 49999999999999876544 789999999974 333333
Q ss_pred CeEE---------------------------------EEECCC-----CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC
Q psy2083 92 SVVK---------------------------------IWSKDN-----GSLFTCIESGDQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 92 ~~IK---------------------------------IWD~~t-----Gk~~~tie~~h~~~In~l~~~pdsgll~sa~e 133 (248)
..+- .|.... +..-.+|. |..+|++|.|+-.|.+|++.+-
T Consensus 464 ~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~--~~k~i~~vtWHrkGDYlatV~~ 541 (733)
T KOG0650|consen 464 ECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIK--HPKSIRQVTWHRKGDYLATVMP 541 (733)
T ss_pred CceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEe--cCCccceeeeecCCceEEEecc
Confidence 3333 443331 00111222 4789999999999999999876
Q ss_pred CC---eEEEEEc
Q psy2083 134 NK---KILTYYI 142 (248)
Q Consensus 134 d~---~I~~w~I 142 (248)
++ .|.++.+
T Consensus 542 ~~~~~~VliHQL 553 (733)
T KOG0650|consen 542 DSGNKSVLIHQL 553 (733)
T ss_pred CCCcceEEEEec
Confidence 53 4555544
No 221
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.01 E-value=0.00011 Score=68.95 Aligned_cols=91 Identities=14% Similarity=0.168 Sum_probs=68.8
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEE
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMM 128 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll 128 (248)
|+|.+.|..+.+.+.....+. .+-..+.|+||+ .+++.|+.|.++|+.+++.+.++.. .....+++++|||.++
T Consensus 16 ~~v~viD~~t~~~~~~i~~~~-~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~--G~~~~~i~~s~DG~~~ 92 (369)
T PF02239_consen 16 GSVAVIDGATNKVVARIPTGG-APHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKV--GGNPRGIAVSPDGKYV 92 (369)
T ss_dssp TEEEEEETTT-SEEEEEE-ST-TEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE---SSEEEEEEE--TTTEE
T ss_pred CEEEEEECCCCeEEEEEcCCC-CceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEec--CCCcceEEEcCCCCEE
Confidence 599999999999888776542 234567899987 4456689999999999999999998 4667889999999999
Q ss_pred EEEe-CCCeEEEEEcCCC
Q psy2083 129 FIAN-ENKKILTYYIPSL 145 (248)
Q Consensus 129 ~sa~-ed~~I~~w~Ip~l 145 (248)
++++ .++++.++|...|
T Consensus 93 ~v~n~~~~~v~v~D~~tl 110 (369)
T PF02239_consen 93 YVANYEPGTVSVIDAETL 110 (369)
T ss_dssp EEEEEETTEEEEEETTT-
T ss_pred EEEecCCCceeEeccccc
Confidence 9887 5689999997665
No 222
>KOG1517|consensus
Probab=97.99 E-value=3.4e-05 Score=79.49 Aligned_cols=111 Identities=18% Similarity=0.295 Sum_probs=82.7
Q ss_pred eeEEEEeCCC-CcEEEeecCceeeeecCCeeEEEEcCCC-c--eeE-EecCCCCCCeeEEEEcCCc--eeeeCCCeEEEE
Q psy2083 25 FNNLCHIPES-GMMFIANENKKILTYYIPAFYLYDIRAD-K--PLR-VKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIW 97 (248)
Q Consensus 25 V~~~~~~~~~-g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~--pl~-~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIW 97 (248)
|+.+.+.+.+ +.+++++.+ |.|++||+|.+ + ++. ...-.||...+++..|++. ++|+..+.||||
T Consensus 1259 Iv~~slq~~G~~elvSgs~~--------G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~q~ikIy 1330 (1387)
T KOG1517|consen 1259 IVHLSLQRQGLGELVSGSQD--------GDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSAQLIKIY 1330 (1387)
T ss_pred ceeEEeecCCCcceeeeccC--------CeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCcceEEEE
Confidence 8888888733 226666655 59999999995 1 222 2333456779999999987 666666999999
Q ss_pred ECCCCCEEEEeecC------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 98 SKDNGSLFTCIESG------DQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 98 D~~tGk~~~tie~~------h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|.. |+.+..+..+ ....+.|++|+|---++++|+.|..|.+|-.+.
T Consensus 1331 ~~~-G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k 1382 (1387)
T KOG1517|consen 1331 SLS-GEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEK 1382 (1387)
T ss_pred ecC-hhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecCC
Confidence 987 7666665431 134678999999999999999999999997654
No 223
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=97.99 E-value=0.00027 Score=65.85 Aligned_cols=112 Identities=9% Similarity=0.148 Sum_probs=73.1
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eeeCC---CeEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSMDS---SVVKI 96 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ssdd---~~IKI 96 (248)
+.+...+|+|++..++.+.+.++ ...|.+||+.++.......+. .......|+|++ | .+++. ..|-+
T Consensus 234 ~~~~~~~~spDg~~l~~~~~~~~-----~~~i~~~d~~~~~~~~l~~~~--~~~~~~~~s~dg~~l~~~s~~~g~~~iy~ 306 (417)
T TIGR02800 234 GMNGAPAFSPDGSKLAVSLSKDG-----NPDIYVMDLDGKQLTRLTNGP--GIDTEPSWSPDGKSIAFTSDRGGSPQIYM 306 (417)
T ss_pred CCccceEECCCCCEEEEEECCCC-----CccEEEEECCCCCEEECCCCC--CCCCCEEECCCCCEEEEEECCCCCceEEE
Confidence 44566788888776654433211 236999999987544333332 445677899987 4 34442 25778
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC---eEEEEEcC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK---KILTYYIP 143 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~---~I~~w~Ip 143 (248)
||..+++. ..+.. +...+...+|+|||..|+.++.+. +|.+|++.
T Consensus 307 ~d~~~~~~-~~l~~-~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~ 354 (417)
T TIGR02800 307 MDADGGEV-RRLTF-RGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLD 354 (417)
T ss_pred EECCCCCE-EEeec-CCCCccCeEECCCCCEEEEEEccCCceEEEEEeCC
Confidence 88887764 34443 245667889999999998888765 67777654
No 224
>KOG1538|consensus
Probab=97.98 E-value=1.4e-05 Score=78.96 Aligned_cols=96 Identities=14% Similarity=0.246 Sum_probs=74.7
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc--eee-eCCCeEEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIWS 98 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD 98 (248)
..|+++||-|||..++.+.++ .+.+||...|..+.+ +.|. .-|++|+|+.|+ .+| +.|+.|-||.
T Consensus 13 hci~d~afkPDGsqL~lAAg~---------rlliyD~ndG~llqtLKgHK--DtVycVAys~dGkrFASG~aDK~VI~W~ 81 (1081)
T KOG1538|consen 13 HCINDIAFKPDGTQLILAAGS---------RLLVYDTSDGTLLQPLKGHK--DTVYCVAYAKDGKRFASGSADKSVIIWT 81 (1081)
T ss_pred cchheeEECCCCceEEEecCC---------EEEEEeCCCccccccccccc--ceEEEEEEccCCceeccCCCceeEEEec
Confidence 379999999999888887777 599999999987766 4555 889999999998 444 5799999999
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN 132 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ 132 (248)
..--. .+.=.|...|.|+.|+|=+..|++++
T Consensus 82 ~klEG---~LkYSH~D~IQCMsFNP~~h~LasCs 112 (1081)
T KOG1538|consen 82 SKLEG---ILKYSHNDAIQCMSFNPITHQLASCS 112 (1081)
T ss_pred ccccc---eeeeccCCeeeEeecCchHHHhhhcc
Confidence 76322 22212578999999998777666654
No 225
>KOG0974|consensus
Probab=97.98 E-value=3.4e-05 Score=78.91 Aligned_cols=89 Identities=17% Similarity=0.271 Sum_probs=74.2
Q ss_pred eecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--eee-eCCCeEEEEECCCCCEEE-EeecCCCCCeeEEEEe
Q psy2083 48 TYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIWSKDNGSLFT-CIESGDQTQFNNLCHI 122 (248)
Q Consensus 48 ~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD~~tGk~~~-tie~~h~~~In~l~~~ 122 (248)
|+..|.|.+|+.... +|...+.|. ..|-++.|+.|+ ++| |||+++|+|++++++.+. +.-+ |++.|..+||.
T Consensus 151 gsv~~~iivW~~~~dn~p~~l~GHe--G~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fg-HsaRvw~~~~~ 227 (967)
T KOG0974|consen 151 GSVFGEIIVWKPHEDNKPIRLKGHE--GSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFG-HSARVWACCFL 227 (967)
T ss_pred ccccccEEEEeccccCCcceecccC--CceEEEEEccCCcEEEEEecCcceeeeecccccccCccccc-ccceeEEEEec
Confidence 344568999998743 677666666 899999999998 544 799999999999988776 3344 79999999999
Q ss_pred CCCCEEEEEeCCCeEEEEE
Q psy2083 123 PESGMMFIANENKKILTYY 141 (248)
Q Consensus 123 pdsgll~sa~ed~~I~~w~ 141 (248)
|+ .|.++++|.+..+|.
T Consensus 228 ~n--~i~t~gedctcrvW~ 244 (967)
T KOG0974|consen 228 PN--RIITVGEDCTCRVWG 244 (967)
T ss_pred cc--eeEEeccceEEEEEe
Confidence 99 999999999999994
No 226
>PRK03629 tolB translocation protein TolB; Provisional
Probab=97.97 E-value=0.00028 Score=67.27 Aligned_cols=111 Identities=12% Similarity=0.162 Sum_probs=70.6
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eeeC-CCeEEEE--
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSMD-SSVVKIW-- 97 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ssd-d~~IKIW-- 97 (248)
.+....|+||+..++.+.+.++ ...|.+||+.++++.....+. ..+....|+||+ | .+++ ++..+||
T Consensus 244 ~~~~~~~SPDG~~La~~~~~~g-----~~~I~~~d~~tg~~~~lt~~~--~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~ 316 (429)
T PRK03629 244 HNGAPAFSPDGSKLAFALSKTG-----SLNLYVMDLASGQIRQVTDGR--SNNTEPTWFPDSQNLAYTSDQAGRPQVYKV 316 (429)
T ss_pred CcCCeEECCCCCEEEEEEcCCC-----CcEEEEEECCCCCEEEccCCC--CCcCceEECCCCCEEEEEeCCCCCceEEEE
Confidence 3456789998877765433221 126999999988765443332 467889999997 4 4554 3445555
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC-C--eEEEEEcC
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN-K--KILTYYIP 143 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed-~--~I~~w~Ip 143 (248)
|..+|+. ..+.. +.....+.+|+|||..|+.++.+ + .|.+|++.
T Consensus 317 d~~~g~~-~~lt~-~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~ 363 (429)
T PRK03629 317 NINGGAP-QRITW-EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA 363 (429)
T ss_pred ECCCCCe-EEeec-CCCCccCEEECCCCCEEEEEEccCCCceEEEEECC
Confidence 6776654 34443 13445678999999888776543 3 46666653
No 227
>KOG3914|consensus
Probab=97.91 E-value=1.6e-05 Score=74.22 Aligned_cols=88 Identities=15% Similarity=0.268 Sum_probs=64.5
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE--ecCCCCCCeeEEEEcCCc-ee
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV--KDHMYGLPIRDIKFHDNY-VL 87 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~--~~h~~~~pI~sI~F~~d~-l~ 87 (248)
|++.-.++ |.+.+..++++||+..++++-.|. +||+ .|-+.+..+ +--+|...|..++.-++. ++
T Consensus 142 ~~~~~~lG--hvSml~dVavS~D~~~IitaDRDE--------kIRv--s~ypa~f~IesfclGH~eFVS~isl~~~~~Ll 209 (390)
T KOG3914|consen 142 GRCEPILG--HVSMLLDVAVSPDDQFIITADRDE--------KIRV--SRYPATFVIESFCLGHKEFVSTISLTDNYLLL 209 (390)
T ss_pred cCcchhhh--hhhhhheeeecCCCCEEEEecCCc--------eEEE--EecCcccchhhhccccHhheeeeeeccCceee
Confidence 44444333 368999999999998888887776 6776 344444332 333455899999999887 55
Q ss_pred e-eCCCeEEEEECCCCCEEEEeec
Q psy2083 88 S-MDSSVVKIWSKDNGSLFTCIES 110 (248)
Q Consensus 88 S-sdd~~IKIWD~~tGk~~~tie~ 110 (248)
| +.|++|++||..+|+++.++.-
T Consensus 210 S~sGD~tlr~Wd~~sgk~L~t~dl 233 (390)
T KOG3914|consen 210 SGSGDKTLRLWDITSGKLLDTCDL 233 (390)
T ss_pred ecCCCCcEEEEecccCCcccccch
Confidence 5 5799999999999999988753
No 228
>KOG2315|consensus
Probab=97.91 E-value=0.00013 Score=70.75 Aligned_cols=108 Identities=12% Similarity=0.178 Sum_probs=81.8
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee---CCCeEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM---DSSVVK 95 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss---dd~~IK 95 (248)
.+.|.+++|+|.+.-.+++=+-. =.+|.+||+| ++|+..+.. +|=|++-|+|.+ ++++ -.|.|-
T Consensus 270 ~GPVhdv~W~~s~~EF~VvyGfM------PAkvtifnlr-~~~v~df~e---gpRN~~~fnp~g~ii~lAGFGNL~G~mE 339 (566)
T KOG2315|consen 270 EGPVHDVTWSPSGREFAVVYGFM------PAKVTIFNLR-GKPVFDFPE---GPRNTAFFNPHGNIILLAGFGNLPGDME 339 (566)
T ss_pred CCCceEEEECCCCCEEEEEEecc------cceEEEEcCC-CCEeEeCCC---CCccceEECCCCCEEEEeecCCCCCceE
Confidence 47899999999665444432221 1489999999 467777654 477999999998 4444 378999
Q ss_pred EEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC------CeEEEEEc
Q psy2083 96 IWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN------KKILTYYI 142 (248)
Q Consensus 96 IWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed------~~I~~w~I 142 (248)
|||..+.+++.+++. ..-+-+.|+|||..|++|.-. ..|++|.+
T Consensus 340 vwDv~n~K~i~~~~a---~~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhy 389 (566)
T KOG2315|consen 340 VWDVPNRKLIAKFKA---ANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHY 389 (566)
T ss_pred EEeccchhhcccccc---CCceEEEEcCCCcEEEEEeccccEEecCCeEEEEe
Confidence 999999999999886 344457899999999999865 55678864
No 229
>KOG1310|consensus
Probab=97.89 E-value=3.8e-05 Score=74.55 Aligned_cols=75 Identities=13% Similarity=0.228 Sum_probs=66.4
Q ss_pred CCCCCCeeEEEEcCCc--eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC--CCCEEEEEeCCCeEEEEEcCC
Q psy2083 70 HMYGLPIRDIKFHDNY--VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP--ESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 70 h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p--dsgll~sa~ed~~I~~w~Ip~ 144 (248)
.+|.+-||++.|+.++ ++| |||--+-|||.-.-|++++|..+|.+.|-|+.|.| +..++++|..|..|++|++..
T Consensus 47 ~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~ 126 (758)
T KOG1310|consen 47 TGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDS 126 (758)
T ss_pred ccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEeccc
Confidence 3556999999999998 554 58888889999999999999988899999999999 557899999999999999875
No 230
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=97.89 E-value=0.00038 Score=64.92 Aligned_cols=111 Identities=11% Similarity=0.118 Sum_probs=72.3
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eee-C--CCeEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSM-D--SSVVKI 96 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ss-d--d~~IKI 96 (248)
..+.+..++|++..++.+...+ ....|.+||+.+++......+. ..+.++.|+||+ + +++ . ...|.+
T Consensus 190 ~~~~~p~~Spdg~~la~~~~~~-----~~~~i~v~d~~~g~~~~~~~~~--~~~~~~~~spDg~~l~~~~~~~~~~~i~~ 262 (417)
T TIGR02800 190 EPILSPAWSPDGQKLAYVSFES-----GKPEIYVQDLATGQREKVASFP--GMNGAPAFSPDGSKLAVSLSKDGNPDIYV 262 (417)
T ss_pred CceecccCCCCCCEEEEEEcCC-----CCcEEEEEECCCCCEEEeecCC--CCccceEECCCCCEEEEEECCCCCccEEE
Confidence 4577888999888776554432 1248999999998655443332 456779999997 3 333 2 336889
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEc
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYI 142 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~I 142 (248)
||..+++. ..+.. +.....+.+|+|||..|+..++ ++...+|.+
T Consensus 263 ~d~~~~~~-~~l~~-~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~ 307 (417)
T TIGR02800 263 MDLDGKQL-TRLTN-GPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMM 307 (417)
T ss_pred EECCCCCE-EECCC-CCCCCCCEEECCCCCEEEEEECCCCCceEEEE
Confidence 99987764 44443 2444557789999987776654 444344443
No 231
>KOG1963|consensus
Probab=97.87 E-value=0.00015 Score=73.21 Aligned_cols=115 Identities=13% Similarity=0.193 Sum_probs=86.6
Q ss_pred CCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEE-cC-CC-ceeEEecCCCCCCeeEEEEcCCc--eeee-CCCeE
Q psy2083 21 DQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYD-IR-AD-KPLRVKDHMYGLPIRDIKFHDNY--VLSM-DSSVV 94 (248)
Q Consensus 21 ~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwD-lR-s~-~pl~~~~h~~~~pI~sI~F~~d~--l~Ss-dd~~I 94 (248)
|+-.++..+++| ++..++++..+ |.|.+|- +. +. +-..+.-|-|-.+|++++|++++ |+|+ -.+.+
T Consensus 204 Htf~~t~~~~sp-n~~~~Aa~d~d-------GrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VL 275 (792)
T KOG1963|consen 204 HTFNITCVALSP-NERYLAAGDSD-------GRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVL 275 (792)
T ss_pred hcccceeEEecc-ccceEEEeccC-------CcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEE
Confidence 344567777777 55555555554 5999995 44 12 22334456666899999999998 6665 67888
Q ss_pred EEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 95 KIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 95 KIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
-+|...|++ ..+-|.=.++|.++.++|||.+.....+|.+|++--.|.|
T Consensus 276 v~Wq~~T~~--kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl 324 (792)
T KOG1963|consen 276 VLWQLETGK--KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDL 324 (792)
T ss_pred EEEeecCCC--cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccch
Confidence 899999988 5666632479999999999999999999999999887766
No 232
>KOG0309|consensus
Probab=97.85 E-value=3.1e-05 Score=77.31 Aligned_cols=124 Identities=10% Similarity=0.198 Sum_probs=93.8
Q ss_pred ecCCCCCeeEEEEeCCCCcE-EEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCC---ceeeeCCC
Q psy2083 18 ESGDQTQFNNLCHIPESGMM-FIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDN---YVLSMDSS 92 (248)
Q Consensus 18 ~~~~~~~V~~~~~~~~~g~l-~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d---~l~Ssdd~ 92 (248)
-++|...|++.-|.|+.--+ ++++-|. .|-.||+|++ +|+...+.-+ ..-..|+|+-. .++++..+
T Consensus 110 lhghsraitd~n~~~q~pdVlatcsvdt--------~vh~wd~rSp~~p~ys~~~w~-s~asqVkwnyk~p~vlasshg~ 180 (1081)
T KOG0309|consen 110 LHGHSRAITDINFNPQHPDVLATCSVDT--------YVHAWDMRSPHRPFYSTSSWR-SAASQVKWNYKDPNVLASSHGN 180 (1081)
T ss_pred EecCccceeccccCCCCCcceeeccccc--------cceeeeccCCCcceeeeeccc-ccCceeeecccCcchhhhccCC
Confidence 34458899999999877664 4555554 8999999998 7877654221 34467777643 27788899
Q ss_pred eEEEEECCCC-CEEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhc
Q psy2083 93 VVKIWSKDNG-SLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEE 164 (248)
Q Consensus 93 ~IKIWD~~tG-k~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~ 164 (248)
-|.+||.+.| .++.++.+ |.+.||++.|.- --+.+++.+.|++|+.|+ .++=|+|.+.
T Consensus 181 ~i~vwd~r~gs~pl~s~K~-~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~-------------y~kSt~e~~~ 240 (1081)
T KOG0309|consen 181 DIFVWDLRKGSTPLCSLKG-HVSSVNSIDFNRFKYSEIMSSSNDGTVKFWD-------------YSKSTTESKR 240 (1081)
T ss_pred ceEEEeccCCCcceEEecc-cceeeehHHHhhhhhhhhcccCCCCceeeec-------------ccccccccce
Confidence 9999999975 68899998 689999999864 336789999999999997 4555666665
No 233
>PRK05137 tolB translocation protein TolB; Provisional
Probab=97.84 E-value=0.00056 Score=65.07 Aligned_cols=111 Identities=13% Similarity=0.140 Sum_probs=71.6
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeC-C--CeEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMD-S--SVVKI 96 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssd-d--~~IKI 96 (248)
+.+....|+||+..++.+.+.++ ...|.+||+.++.+.....+. .......|+||+ +.+++ + ..|.+
T Consensus 246 g~~~~~~~SPDG~~la~~~~~~g-----~~~Iy~~d~~~~~~~~Lt~~~--~~~~~~~~spDG~~i~f~s~~~g~~~Iy~ 318 (435)
T PRK05137 246 GMTFAPRFSPDGRKVVMSLSQGG-----NTDIYTMDLRSGTTTRLTDSP--AIDTSPSYSPDGSQIVFESDRSGSPQLYV 318 (435)
T ss_pred CcccCcEECCCCCEEEEEEecCC-----CceEEEEECCCCceEEccCCC--CccCceeEcCCCCEEEEEECCCCCCeEEE
Confidence 45667888998877654433221 236888899988654433332 456778999997 33443 2 36888
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC-C--eEEEEEc
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN-K--KILTYYI 142 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed-~--~I~~w~I 142 (248)
||..+++. ..+..+ ...++...|+|||..|+..+.+ + .|.+|+.
T Consensus 319 ~d~~g~~~-~~lt~~-~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~ 365 (435)
T PRK05137 319 MNADGSNP-RRISFG-GGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKP 365 (435)
T ss_pred EECCCCCe-EEeecC-CCcccCeEECCCCCEEEEEEcCCCceEEEEEEC
Confidence 89876654 444431 4556778999999988776643 3 5666663
No 234
>KOG1523|consensus
Probab=97.84 E-value=0.00013 Score=66.91 Aligned_cols=139 Identities=12% Similarity=0.194 Sum_probs=101.6
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC---ceeEE-ecCCCCCCeeEEEEcCCc---
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD---KPLRV-KDHMYGLPIRDIKFHDNY--- 85 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~---~pl~~-~~h~~~~pI~sI~F~~d~--- 85 (248)
...++..| ...|+.+++.|.+..+++++-|. .-.+|..+++ +|..+ +.+. ...++|.|+|..
T Consensus 47 ~~htls~H-d~~vtgvdWap~snrIvtcs~dr--------nayVw~~~~~~~WkptlvLlRiN--rAAt~V~WsP~enkF 115 (361)
T KOG1523|consen 47 PAHTLSEH-DKIVTGVDWAPKSNRIVTCSHDR--------NAYVWTQPSGGTWKPTLVLLRIN--RAATCVKWSPKENKF 115 (361)
T ss_pred eceehhhh-CcceeEEeecCCCCceeEccCCC--------CccccccCCCCeeccceeEEEec--cceeeEeecCcCceE
Confidence 45566665 57899999999887899988887 6799999776 56554 3454 789999999986
Q ss_pred eeeeCCCeEEEEECCCCCEEE---Ee-ecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEE--EcCCC---CCCCCcccc--
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFT---CI-ESGDQTQFNNLCHIPESGMMFIANENKKILTY--YIPSL---GPAPKWCGF-- 154 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~---ti-e~~h~~~In~l~~~pdsgll~sa~ed~~I~~w--~Ip~l---G~aP~wcs~-- 154 (248)
++++..+.|.||=.+.-+..- -+ .| +.+.|+++.++||.-+|++|+-|++++++ ||... -..|.|-+.
T Consensus 116 AVgSgar~isVcy~E~ENdWWVsKhikkP-irStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~P 194 (361)
T KOG1523|consen 116 AVGSGARLISVCYYEQENDWWVSKHIKKP-IRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMP 194 (361)
T ss_pred EeccCccEEEEEEEecccceehhhhhCCc-cccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCc
Confidence 666788999998766432220 01 23 36789999999999999999999999988 44333 233447664
Q ss_pred ccchhhhhh
Q psy2083 155 LDNLTEELE 163 (248)
Q Consensus 155 ld~~tee~e 163 (248)
+..|.-|+.
T Consensus 195 FG~lm~E~~ 203 (361)
T KOG1523|consen 195 FGQLMSEAS 203 (361)
T ss_pred HHHHHHhhc
Confidence 456777774
No 235
>PRK00178 tolB translocation protein TolB; Provisional
Probab=97.84 E-value=0.00052 Score=64.82 Aligned_cols=121 Identities=6% Similarity=0.070 Sum_probs=75.7
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL- 87 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~- 87 (248)
|...+.+-.+ ...+....++||+..++.++.+++ ...|.+||+.++++....... ..+....|+||+ |+
T Consensus 188 g~~~~~l~~~-~~~~~~p~wSpDG~~la~~s~~~~-----~~~l~~~~l~~g~~~~l~~~~--g~~~~~~~SpDG~~la~ 259 (430)
T PRK00178 188 GARAVTLLQS-REPILSPRWSPDGKRIAYVSFEQK-----RPRIFVQNLDTGRREQITNFE--GLNGAPAWSPDGSKLAF 259 (430)
T ss_pred CCCceEEecC-CCceeeeeECCCCCEEEEEEcCCC-----CCEEEEEECCCCCEEEccCCC--CCcCCeEECCCCCEEEE
Confidence 4333444333 357788899998887765554321 247999999988664433221 345578999997 33
Q ss_pred ee-CCC--eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEE
Q psy2083 88 SM-DSS--VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYY 141 (248)
Q Consensus 88 Ss-dd~--~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~ 141 (248)
+. .++ .|.+||..+|+.. .+.. +.....+..|+|||..|+..++ ++...+|.
T Consensus 260 ~~~~~g~~~Iy~~d~~~~~~~-~lt~-~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~ 315 (430)
T PRK00178 260 VLSKDGNPEIYVMDLASRQLS-RVTN-HPAIDTEPFWGKDGRTLYFTSDRGGKPQIYK 315 (430)
T ss_pred EEccCCCceEEEEECCCCCeE-Eccc-CCCCcCCeEECCCCCEEEEEECCCCCceEEE
Confidence 33 333 6888899987653 4544 2455667899999987665553 44444443
No 236
>KOG4714|consensus
Probab=97.79 E-value=5.3e-05 Score=67.85 Aligned_cols=106 Identities=14% Similarity=0.278 Sum_probs=75.8
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEE-ecCCCCCCeeEEEEcCCc----eeeeCCCeEEEE
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRV-KDHMYGLPIRDIKFHDNY----VLSMDSSVVKIW 97 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~-~~h~~~~pI~sI~F~~d~----l~Ssdd~~IKIW 97 (248)
.|..+|..|..+.++.+|+++ |.|.|||.|.. .|.-. +.|. .+|+.|-|||.. +.+++|+.+=-|
T Consensus 181 ~v~~l~~hp~qq~~v~cgt~d-------g~~~l~d~rn~~~p~S~l~ahk--~~i~eV~FHpk~p~~Lft~sedGslw~w 251 (319)
T KOG4714|consen 181 AVTALCSHPAQQHLVCCGTDD-------GIVGLWDARNVAMPVSLLKAHK--AEIWEVHFHPKNPEHLFTCSEDGSLWHW 251 (319)
T ss_pred cchhhhCCcccccEEEEecCC-------CeEEEEEcccccchHHHHHHhh--hhhhheeccCCCchheeEecCCCcEEEE
Confidence 588999999888888888876 59999999987 34332 3555 899999999975 666799999999
Q ss_pred ECCCCCEEE------------------E------eecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 98 SKDNGSLFT------------------C------IESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 98 D~~tGk~~~------------------t------ie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
|..+ +++. + +.++....||++.+ -|..|++|++-+-|.++.
T Consensus 252 das~-~~l~i~~~~s~~s~WLsgD~v~s~i~i~~ll~~~~~SinsfDV--~g~~lVcgtd~eaIyl~~ 316 (319)
T KOG4714|consen 252 DAST-TFLSISNQASVISSWLSGDPVKSRIEITSLLPSRSLSINSFDV--LGPCLVCGTDAEAIYLTR 316 (319)
T ss_pred cCCC-ceEEecCccccccccccCCcccceEeeeccccccceeeeeeec--cCceEEeccccceEEEec
Confidence 9873 2222 1 11111234564444 577889999888888774
No 237
>PRK04922 tolB translocation protein TolB; Provisional
Probab=97.79 E-value=0.00074 Score=64.26 Aligned_cols=110 Identities=10% Similarity=0.123 Sum_probs=69.0
Q ss_pred CeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeC-CC--eEEE
Q psy2083 24 QFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMD-SS--VVKI 96 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssd-d~--~IKI 96 (248)
......|+|++..++ +.+.++ ...|.+||+.++.......+. .......|+||+ +.+++ ++ .|-+
T Consensus 249 ~~~~~~~SpDG~~l~~~~s~~g------~~~Iy~~d~~~g~~~~lt~~~--~~~~~~~~spDG~~l~f~sd~~g~~~iy~ 320 (433)
T PRK04922 249 INGAPSFSPDGRRLALTLSRDG------NPEIYVMDLGSRQLTRLTNHF--GIDTEPTWAPDGKSIYFTSDRGGRPQIYR 320 (433)
T ss_pred CccCceECCCCCEEEEEEeCCC------CceEEEEECCCCCeEECccCC--CCccceEECCCCCEEEEEECCCCCceEEE
Confidence 344678889887665 333332 247999999988654433332 345678999997 44454 33 3666
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC-C--eEEEEEcC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN-K--KILTYYIP 143 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed-~--~I~~w~Ip 143 (248)
+|..+|+. ..+..+ .......+|+|||..|+..+.+ + .|.+|++.
T Consensus 321 ~dl~~g~~-~~lt~~-g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~ 368 (433)
T PRK04922 321 VAASGGSA-ERLTFQ-GNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLS 368 (433)
T ss_pred EECCCCCe-EEeecC-CCCccCEEECCCCCEEEEEECCCCceeEEEEECC
Confidence 67777764 333321 2334468999999988876543 3 57888763
No 238
>KOG1240|consensus
Probab=97.78 E-value=0.00021 Score=74.63 Aligned_cols=114 Identities=18% Similarity=0.244 Sum_probs=88.2
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc------eeee--CCCeE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY------VLSM--DSSVV 94 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~------l~Ss--dd~~I 94 (248)
+-|+++|..|-+.++++|.+. |.+-+||+|=+.|+....|.+..||+.+..+|-. ++++ ..+-|
T Consensus 1196 G~vTSi~idp~~~WlviGts~--------G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nev 1267 (1431)
T KOG1240|consen 1196 GLVTSIVIDPWCNWLVIGTSR--------GQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEV 1267 (1431)
T ss_pred cceeEEEecCCceEEEEecCC--------ceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCce
Confidence 688999999988778777666 4899999999999998888888999999887642 3332 46789
Q ss_pred EEEECCCCCEEEEeecC------------------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 95 KIWSKDNGSLFTCIESG------------------DQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 95 KIWD~~tGk~~~tie~~------------------h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.+|+..+|..-+++-.. +..+.+..++..-++.+++|+.|.+|+-||.+.
T Consensus 1268 s~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~ 1335 (1431)
T KOG1240|consen 1268 STWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTR 1335 (1431)
T ss_pred eeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCC
Confidence 99999999877665431 112234556666778999999999999999764
No 239
>KOG1334|consensus
Probab=97.78 E-value=7.9e-05 Score=71.39 Aligned_cols=127 Identities=13% Similarity=0.095 Sum_probs=98.0
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-----ee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-----VL 87 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-----l~ 87 (248)
+...+..| .+.|+++-|...+..++++++|. +|-+||--+++|...+.-+|-..|-.-.|-|.. +.
T Consensus 134 l~~kL~~H-~GcVntV~FN~~Gd~l~SgSDD~--------~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~ 204 (559)
T KOG1334|consen 134 LQKKLNKH-KGCVNTVHFNQRGDVLASGSDDL--------QVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVT 204 (559)
T ss_pred hhhcccCC-CCccceeeecccCceeeccCccc--------eEEeehhhccCcccccccccccchhhhhccCCCCCcCcee
Confidence 34445665 69999999998776666666665 899999999999888866666778888898864 55
Q ss_pred eeCCCeEEEEECC-CCCEE--EEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCCCC
Q psy2083 88 SMDSSVVKIWSKD-NGSLF--TCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGPAP 149 (248)
Q Consensus 88 Ssdd~~IKIWD~~-tGk~~--~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~aP 149 (248)
++.|++|++=.+- +|.+. ..+.+ |..+|+.+++-|++ .-|+++++|+.+...++..=-|+-
T Consensus 205 ~s~dgqvr~s~i~~t~~~e~t~rl~~-h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~ 269 (559)
T KOG1334|consen 205 SSRDGQVRVSEILETGYVENTKRLAP-HEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAE 269 (559)
T ss_pred ccccCceeeeeeccccceecceeccc-ccCccceeeecCCCCCcccccccccceeeeeeccCCccc
Confidence 6789999986654 34433 23334 68999999999988 668899999999999988766663
No 240
>KOG0650|consensus
Probab=97.78 E-value=0.00013 Score=71.50 Aligned_cols=118 Identities=12% Similarity=0.227 Sum_probs=94.2
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc---eeEEecCCCCCCeeEEEEcCCc--ee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK---PLRVKDHMYGLPIRDIKFHDNY--VL 87 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~---pl~~~~h~~~~pI~sI~F~~d~--l~ 87 (248)
...+|.+. ..|+.+.++..|.+++++..++ ..-.|.|++|..++ |+.. .+ +-|..+.|||.. ++
T Consensus 514 v~~~I~~~--k~i~~vtWHrkGDYlatV~~~~-----~~~~VliHQLSK~~sQ~PF~k-sk---G~vq~v~FHPs~p~lf 582 (733)
T KOG0650|consen 514 VCIVIKHP--KSIRQVTWHRKGDYLATVMPDS-----GNKSVLIHQLSKRKSQSPFRK-SK---GLVQRVKFHPSKPYLF 582 (733)
T ss_pred eEEEEecC--CccceeeeecCCceEEEeccCC-----CcceEEEEecccccccCchhh-cC---CceeEEEecCCCceEE
Confidence 44555554 7899999999999888876654 23589999997653 3322 22 468999999997 66
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
-+..+.|+|||...+..+..+.++ ...|.+++++|+|.-|+.++.|++|.-|++
T Consensus 583 VaTq~~vRiYdL~kqelvKkL~tg-~kwiS~msihp~GDnli~gs~d~k~~WfDl 636 (733)
T KOG0650|consen 583 VATQRSVRIYDLSKQELVKKLLTG-SKWISSMSIHPNGDNLILGSYDKKMCWFDL 636 (733)
T ss_pred EEeccceEEEehhHHHHHHHHhcC-CeeeeeeeecCCCCeEEEecCCCeeEEEEc
Confidence 677889999999988888888774 779999999999999999999999988875
No 241
>KOG1524|consensus
Probab=97.77 E-value=9.1e-05 Score=71.83 Aligned_cols=95 Identities=14% Similarity=0.218 Sum_probs=67.6
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--eee-eCCCeEEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIWS 98 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD 98 (248)
..|.++++-|++..++-+.++ ++.|=-+... +|+.-+.|. +-|.++.|++.. ++| +.|-..||||
T Consensus 146 ~~v~c~~W~p~S~~vl~c~g~---------h~~IKpL~~n~k~i~WkAHD--GiiL~~~W~~~s~lI~sgGED~kfKvWD 214 (737)
T KOG1524|consen 146 ESIRCARWAPNSNSIVFCQGG---------HISIKPLAANSKIIRWRAHD--GLVLSLSWSTQSNIIASGGEDFRFKIWD 214 (737)
T ss_pred ceeEEEEECCCCCceEEecCC---------eEEEeecccccceeEEeccC--cEEEEeecCccccceeecCCceeEEeec
Confidence 468888888988776655554 4555556544 778888887 889999999986 555 5799999999
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEE
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIA 131 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa 131 (248)
.. |.++-+-.+ |..+|++++|.|| .+++.+
T Consensus 215 ~~-G~~Lf~S~~-~ey~ITSva~npd-~~~~v~ 244 (737)
T KOG1524|consen 215 AQ-GANLFTSAA-EEYAITSVAFNPE-KDYLLW 244 (737)
T ss_pred cc-CcccccCCh-hccceeeeeeccc-cceeee
Confidence 87 666665555 4667777776655 444433
No 242
>PRK04792 tolB translocation protein TolB; Provisional
Probab=97.77 E-value=0.00059 Score=65.52 Aligned_cols=112 Identities=12% Similarity=0.115 Sum_probs=71.9
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-ee-eCCC--eEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LS-MDSS--VVKI 96 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~S-sdd~--~IKI 96 (248)
..+.+..|+||+..++.++.+++ ...|.+||+.++++....... .......|+||+ + .+ +.++ .|.+
T Consensus 218 ~~~~~p~wSPDG~~La~~s~~~g-----~~~L~~~dl~tg~~~~lt~~~--g~~~~~~wSPDG~~La~~~~~~g~~~Iy~ 290 (448)
T PRK04792 218 EPLMSPAWSPDGRKLAYVSFENR-----KAEIFVQDIYTQVREKVTSFP--GINGAPRFSPDGKKLALVLSKDGQPEIYV 290 (448)
T ss_pred CcccCceECCCCCEEEEEEecCC-----CcEEEEEECCCCCeEEecCCC--CCcCCeeECCCCCEEEEEEeCCCCeEEEE
Confidence 45678899998887765544321 137999999988764432211 234578999997 3 33 3344 4778
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIP 143 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip 143 (248)
||.++|+. ..+.. +.......+|+|||..|+..++ ++...+|.+.
T Consensus 291 ~dl~tg~~-~~lt~-~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~d 336 (448)
T PRK04792 291 VDIATKAL-TRITR-HRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVN 336 (448)
T ss_pred EECCCCCe-EECcc-CCCCccceEECCCCCEEEEEECCCCCceEEEEE
Confidence 89987764 44544 2455677899999987766554 4555555443
No 243
>KOG3914|consensus
Probab=97.72 E-value=0.00019 Score=67.11 Aligned_cols=153 Identities=17% Similarity=0.169 Sum_probs=104.9
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce----eEEecCCCCCCeeEEEEcCCc----e--eeeCCCeEE
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP----LRVKDHMYGLPIRDIKFHDNY----V--LSMDSSVVK 95 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p----l~~~~h~~~~pI~sI~F~~d~----l--~Ssdd~~IK 95 (248)
..+.++|.+.+++.+.+++ ...++|.+...+ +.+..-. ..-++|.|..+. | -++|...+.
T Consensus 66 ~~~~~s~~~~llAv~~~~K--------~~~~f~~~~~~~~~kl~~~~~v~--~~~~ai~~~~~~~sv~v~dkagD~~~~d 135 (390)
T KOG3914|consen 66 ALVLTSDSGRLVAVATSSK--------QRAVFDYRENPKGAKLLDVSCVP--KRPTAISFIREDTSVLVADKAGDVYSFD 135 (390)
T ss_pred cccccCCCceEEEEEeCCC--------ceEEEEEecCCCcceeeeEeecc--cCcceeeeeeccceEEEEeecCCceeee
Confidence 4445555444444444444 556777776543 2222111 223455555442 2 235788999
Q ss_pred EEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhccccccccCCce
Q psy2083 96 IWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDDYK 175 (248)
Q Consensus 96 IWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~~~~yd~y~ 175 (248)
+|....|.+.-. -+ |-+-+.+|+++||+..|++|..|.+|++=-.|+.-..-.||.-=..-+ ....++++|-
T Consensus 136 i~s~~~~~~~~~-lG-hvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFV------S~isl~~~~~ 207 (390)
T KOG3914|consen 136 ILSADSGRCEPI-LG-HVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFV------STISLTDNYL 207 (390)
T ss_pred eecccccCcchh-hh-hhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhhe------eeeeeccCce
Confidence 999887654322 23 689999999999999999999999999999999888899994111111 2457899999
Q ss_pred eecHhHHhhcCCccccCCCcc
Q psy2083 176 FVTRQELEDLGLGHLIGTSLL 196 (248)
Q Consensus 176 fvt~~~l~~l~~~~ligt~~l 196 (248)
.++..-...|.+|++.-...|
T Consensus 208 LlS~sGD~tlr~Wd~~sgk~L 228 (390)
T KOG3914|consen 208 LLSGSGDKTLRLWDITSGKLL 228 (390)
T ss_pred eeecCCCCcEEEEecccCCcc
Confidence 999999999999998877666
No 244
>KOG4547|consensus
Probab=97.70 E-value=0.00039 Score=67.64 Aligned_cols=101 Identities=12% Similarity=0.123 Sum_probs=79.0
Q ss_pred ecCceeeeecCCeeEEEEcCCCceeEEec-CCCCCCeeEEEEcCCc--eee-eCCCeEEEEECCCCCEEEEeecCCCCCe
Q psy2083 41 NENKKILTYYIPAFYLYDIRADKPLRVKD-HMYGLPIRDIKFHDNY--VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQF 116 (248)
Q Consensus 41 g~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~I 116 (248)
+.+--++|+..|.|.+|++-.++-..... -.|..+|+++..+.+. +-| ++|..|-.|+..+++.+..+... +..+
T Consensus 69 ~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~-~~~~ 147 (541)
T KOG4547|consen 69 DTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQ-KPLV 147 (541)
T ss_pred CceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccC-CCcc
Confidence 33344477778999999999987655432 3455899999999886 555 47888999999999999888873 7788
Q ss_pred eEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 117 NNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 117 n~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.++|.+|||+++++|+ ++|++|+|..
T Consensus 148 ~sl~is~D~~~l~~as--~~ik~~~~~~ 173 (541)
T KOG4547|consen 148 SSLCISPDGKILLTAS--RQIKVLDIET 173 (541)
T ss_pred ceEEEcCCCCEEEecc--ceEEEEEccC
Confidence 8999999999998886 5677777543
No 245
>KOG1334|consensus
Probab=97.70 E-value=4.5e-05 Score=72.99 Aligned_cols=111 Identities=16% Similarity=0.315 Sum_probs=86.0
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-c----------ee---EEecCCCCCCeeEEEEcC-Cc-
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-K----------PL---RVKDHMYGLPIRDIKFHD-NY- 85 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~----------pl---~~~~h~~~~pI~sI~F~~-d~- 85 (248)
.-.|++++|+.+++-+.++=.|. .|.|+.-.-+ . ++ ..|+|.+...|+.|.|-. ..
T Consensus 336 ~v~ITgl~Ysh~~sElLaSYnDe--------~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsE 407 (559)
T KOG1334|consen 336 PVNITGLVYSHDGSELLASYNDE--------DIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSE 407 (559)
T ss_pred cccceeEEecCCccceeeeeccc--------ceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccc
Confidence 45789999997776666555554 5788831111 1 11 146888888999999874 33
Q ss_pred -eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 86 -VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 86 -l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
|+| ||-|-|-|||..+|+.+.-+++ +..-|||+.-+|--.+|++.+-|..|++|-
T Consensus 408 yVvSGSDCGhIFiW~K~t~eii~~Meg-Dr~VVNCLEpHP~~PvLAsSGid~DVKIWT 464 (559)
T KOG1334|consen 408 YVVSGSDCGHIFIWDKKTGEIIRFMEG-DRHVVNCLEPHPHLPVLASSGIDHDVKIWT 464 (559)
T ss_pred eEEecCccceEEEEecchhHHHHHhhc-ccceEeccCCCCCCchhhccCCccceeeec
Confidence 555 6888999999999999999998 467999999999999999999999999994
No 246
>KOG2111|consensus
Probab=97.63 E-value=0.00044 Score=63.31 Aligned_cols=77 Identities=16% Similarity=0.177 Sum_probs=58.5
Q ss_pred EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCC-CCCeeEEEEcCCc---eeeeCCC
Q psy2083 17 IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMY-GLPIRDIKFHDNY---VLSMDSS 92 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~-~~pI~sI~F~~d~---l~Ssdd~ 92 (248)
+..| .+.|..+.-.-+|.+++++|..+- -|||||.+++.++...--+. ...|.+|+|+|+. .++||.+
T Consensus 177 I~AH-~s~Iacv~Ln~~Gt~vATaStkGT-------LIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKg 248 (346)
T KOG2111|consen 177 INAH-DSDIACVALNLQGTLVATASTKGT-------LIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKG 248 (346)
T ss_pred EEcc-cCceeEEEEcCCccEEEEeccCcE-------EEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCC
Confidence 4565 577777777776666667666652 79999999999988753232 2579999999997 5567999
Q ss_pred eEEEEECCC
Q psy2083 93 VVKIWSKDN 101 (248)
Q Consensus 93 ~IKIWD~~t 101 (248)
+|.|+.++.
T Consensus 249 TlHiF~l~~ 257 (346)
T KOG2111|consen 249 TLHIFSLRD 257 (346)
T ss_pred eEEEEEeec
Confidence 999998875
No 247
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.60 E-value=0.0018 Score=68.67 Aligned_cols=112 Identities=11% Similarity=0.101 Sum_probs=76.5
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec-C----------C----------CCCCeeEEEEcC
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-H----------M----------YGLPIRDIKFHD 83 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h----------~----------~~~pI~sI~F~~ 83 (248)
.+.++++|+++.++++...+ +.|++||+.++....... . + ...| ..|+|++
T Consensus 742 P~GIavspdG~~LYVADs~n-------~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P-~Gvavd~ 813 (1057)
T PLN02919 742 PSGISLSPDLKELYIADSES-------SSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHP-LGVLCAK 813 (1057)
T ss_pred ccEEEEeCCCCEEEEEECCC-------CeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCC-ceeeEeC
Confidence 35688889888677665554 489999998765322110 0 0 0012 4788988
Q ss_pred Cc---eeeeCCCeEEEEECCCCCEEEEeecC------------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 84 NY---VLSMDSSVVKIWSKDNGSLFTCIESG------------DQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 84 d~---l~Ssdd~~IKIWD~~tGk~~~tie~~------------h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ |+-+.++.|++||..++...+....+ .-.....++++|+|.++++-+.+..|++|++..
T Consensus 814 dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~ 889 (1057)
T PLN02919 814 DGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNK 889 (1057)
T ss_pred CCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCC
Confidence 87 44456889999999987665433211 012567899999999888888889999999755
No 248
>PRK02889 tolB translocation protein TolB; Provisional
Probab=97.59 E-value=0.0027 Score=60.44 Aligned_cols=111 Identities=8% Similarity=0.045 Sum_probs=65.2
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEE--EEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeC-CCeEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYL--YDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMD-SSVVKI 96 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~L--wDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssd-d~~IKI 96 (248)
+.+....|+||+..++.+.+.+ |...| +|+.++.+.....+. ..+.+..|+||+ +.+++ ++...|
T Consensus 240 g~~~~~~~SPDG~~la~~~~~~-------g~~~Iy~~d~~~~~~~~lt~~~--~~~~~~~wSpDG~~l~f~s~~~g~~~I 310 (427)
T PRK02889 240 GSNSAPAWSPDGRTLAVALSRD-------GNSQIYTVNADGSGLRRLTQSS--GIDTEPFFSPDGRSIYFTSDRGGAPQI 310 (427)
T ss_pred CCccceEECCCCCEEEEEEccC-------CCceEEEEECCCCCcEECCCCC--CCCcCeEEcCCCCEEEEEecCCCCcEE
Confidence 3456788899887776443332 24444 456555433222222 445678999997 33454 456667
Q ss_pred EEC--CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC---eEEEEEcCC
Q psy2083 97 WSK--DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK---KILTYYIPS 144 (248)
Q Consensus 97 WD~--~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~---~I~~w~Ip~ 144 (248)
|.. .+|+. ..+... .....+.+|+|||..|+..+.++ .|.+|++..
T Consensus 311 y~~~~~~g~~-~~lt~~-g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~ 361 (427)
T PRK02889 311 YRMPASGGAA-QRVTFT-GSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLAT 361 (427)
T ss_pred EEEECCCCce-EEEecC-CCCcCceEECCCCCEEEEEEccCCcEEEEEEECCC
Confidence 754 44443 333221 22334578999999988776543 588888654
No 249
>KOG0322|consensus
Probab=97.59 E-value=0.00016 Score=64.85 Aligned_cols=66 Identities=15% Similarity=0.302 Sum_probs=55.9
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc---eeeeCCCeEEEEEC
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY---VLSMDSSVVKIWSK 99 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~ 99 (248)
.|+.+..-||+..++++|-|+ .||+|.-|+.+|+.+. .|. ..|++|+|+|+. .+++.|..|.+|++
T Consensus 253 Gv~gvrIRpD~KIlATAGWD~--------RiRVyswrtl~pLAVLkyHs--agvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 253 GVSGVRIRPDGKILATAGWDH--------RIRVYSWRTLNPLAVLKYHS--AGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred CccceEEccCCcEEeecccCC--------cEEEEEeccCCchhhhhhhh--cceeEEEeCCCCchhhhccCCceEEeeec
Confidence 577888889888888999886 7999999999999885 555 889999999995 33457999999986
No 250
>KOG3617|consensus
Probab=97.57 E-value=0.0003 Score=71.44 Aligned_cols=125 Identities=11% Similarity=0.145 Sum_probs=89.4
Q ss_pred EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeee-CCCe
Q psy2083 17 IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSM-DSSV 93 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ss-dd~~ 93 (248)
|+--+++.|.++..+.++.-++++.+- +....|.|-|| +.+|.|-.- -.|..-+++++|||.. ++.+ .-+.
T Consensus 9 IE~~Dsdavsti~SWHPsePlfAVA~f---S~er~GSVtIf-adtGEPqr~--Vt~P~hatSLCWHpe~~vLa~gwe~g~ 82 (1416)
T KOG3617|consen 9 IEFLDSDAVSTISSWHPSEPLFAVASF---SPERGGSVTIF-ADTGEPQRD--VTYPVHATSLCWHPEEFVLAQGWEMGV 82 (1416)
T ss_pred eecccccccccccccCCCCceeEEEEe---cCCCCceEEEE-ecCCCCCcc--cccceehhhhccChHHHHHhhccccce
Confidence 333344566666666556555544321 12345788887 345666432 2222345789999997 4444 6889
Q ss_pred EEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 94 VKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 94 IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
+.+|...+.+.-+..++ |+++|.-+.|+|+|+.++++..-+.+..|..-.+|..
T Consensus 83 ~~v~~~~~~e~htv~~t-h~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~~g~~ 136 (1416)
T KOG3617|consen 83 SDVQKTNTTETHTVVET-HPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDVIGEI 136 (1416)
T ss_pred eEEEecCCceeeeeccC-CCCCceeEEecCCCCeEEEcCCCceeEEEEeeecccc
Confidence 99999998887777778 7999999999999999999999999999998777665
No 251
>KOG1354|consensus
Probab=97.51 E-value=0.00028 Score=65.40 Aligned_cols=111 Identities=17% Similarity=0.189 Sum_probs=79.9
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce------eE-Ee-cCCC-------CCCeeEEEEcCCc--e
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP------LR-VK-DHMY-------GLPIRDIKFHDNY--V 86 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p------l~-~~-~h~~-------~~pI~sI~F~~d~--l 86 (248)
-|++.-|+|...++|+=+++. |+|+|-|+|.... +. .. +... -..|..|.|++++ +
T Consensus 215 VITsaEFhp~~cn~f~YSSSK-------GtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryi 287 (433)
T KOG1354|consen 215 VITSAEFHPHHCNVFVYSSSK-------GTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYI 287 (433)
T ss_pred HHhhhccCHhHccEEEEecCC-------CcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEE
Confidence 356777888877788777765 6999999996521 10 00 1110 1357789999998 7
Q ss_pred eeeCCCeEEEEEC-CCCCEEEEeecC-----------CCCCe---eEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 87 LSMDSSVVKIWSK-DNGSLFTCIESG-----------DQTQF---NNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 87 ~Ssdd~~IKIWD~-~tGk~~~tie~~-----------h~~~I---n~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
++-|--+|||||. ...+++.+++.| ....| -.+||+.++..+++|+-..-.++|.
T Consensus 288 lsRDyltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~ 357 (433)
T KOG1354|consen 288 LSRDYLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFN 357 (433)
T ss_pred EEeccceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEec
Confidence 7778889999999 457888887652 01122 3578899999999999999999997
No 252
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.48 E-value=0.00044 Score=39.84 Aligned_cols=39 Identities=13% Similarity=0.301 Sum_probs=33.7
Q ss_pred CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 102 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 102 Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+++...+.. |...|+++++.|++.++++++.|+.+.+|+
T Consensus 2 ~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKG-HTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEe-cCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 456677776 588999999999999999999999999984
No 253
>KOG3881|consensus
Probab=97.48 E-value=0.00044 Score=64.75 Aligned_cols=109 Identities=13% Similarity=0.124 Sum_probs=79.7
Q ss_pred chhcCc-eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGS-LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~-~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
|++.|+ .+.+|.-. ...+.++.-.|.+..++++..- |.+..+|+|+++-+...-.+..+.|.+|.-||..
T Consensus 232 Dt~~qRRPV~~fd~~-E~~is~~~l~p~gn~Iy~gn~~--------g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~ 302 (412)
T KOG3881|consen 232 DTRHQRRPVAQFDFL-ENPISSTGLTPSGNFIYTGNTK--------GQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTH 302 (412)
T ss_pred cCcccCcceeEeccc-cCcceeeeecCCCcEEEEeccc--------chhheecccCceeeccccCCccCCcceEEEcCCC
Confidence 334443 67777655 4567777777855545555444 4999999999987766434555789999999996
Q ss_pred --eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC
Q psy2083 86 --VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG 126 (248)
Q Consensus 86 --l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg 126 (248)
++| +-|+.|||+|.++.+++..+-- .+.+|++-+.++-.
T Consensus 303 ~~las~GLDRyvRIhD~ktrkll~kvYv--Ks~lt~il~~~~~n 344 (412)
T KOG3881|consen 303 PVLASCGLDRYVRIHDIKTRKLLHKVYV--KSRLTFILLRDDVN 344 (412)
T ss_pred ceEEeeccceeEEEeecccchhhhhhhh--hccccEEEecCCcc
Confidence 554 4699999999999888887766 67888888876543
No 254
>KOG1064|consensus
Probab=97.47 E-value=0.00019 Score=77.36 Aligned_cols=163 Identities=15% Similarity=0.237 Sum_probs=105.6
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCcee---
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNYVL--- 87 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~l~--- 87 (248)
|..+.++....++.|+.+.|..+|+..-++-+| |.+.+|.+. ++|+... ..|....++..|-...++
T Consensus 2240 ~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~d--------g~l~l~q~~-pk~~~s~-qchnk~~~Df~Fi~s~~~tag 2309 (2439)
T KOG1064|consen 2240 GQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGD--------GDLSLWQAS-PKPYTSW-QCHNKALSDFRFIGSLLATAG 2309 (2439)
T ss_pred CCeEEEeeccCcchhhhhhhcccCCceeeeccC--------CceeecccC-Ccceecc-ccCCccccceeeeehhhhccc
Confidence 445555543335677778777766543333333 589999997 7787654 233366788888876533
Q ss_pred -eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhccc
Q psy2083 88 -SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENI 166 (248)
Q Consensus 88 -Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~ 166 (248)
++|++.+-+||..-.....-+...|....+++++.|...+|++|+.+|.|.+|||.+---.-.|=. || |+|
T Consensus 2310 ~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~-~~--~~~----- 2381 (2439)
T KOG1064|consen 2310 RSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA-LD--TRE----- 2381 (2439)
T ss_pred cCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh-hh--hhh-----
Confidence 357899999997642211122222688999999999999999999999999999987444444433 33 332
Q ss_pred cccccCCceeecHhHHhhcCCccccCCCccccc
Q psy2083 167 IENVYDDYKFVTRQELEDLGLGHLIGTSLLRAY 199 (248)
Q Consensus 167 ~~~~yd~y~fvt~~~l~~l~~~~ligt~~l~~y 199 (248)
-|+|-.---.+++|.+=+-.++...
T Consensus 2382 --------~f~~~ss~g~ikIw~~s~~~ll~~~ 2406 (2439)
T KOG1064|consen 2382 --------YFVTGSSEGNIKIWRLSEFGLLHTF 2406 (2439)
T ss_pred --------eeeccCcccceEEEEccccchhhcC
Confidence 3666555555666654444444433
No 255
>KOG4714|consensus
Probab=97.46 E-value=9.8e-05 Score=66.18 Aligned_cols=89 Identities=15% Similarity=0.254 Sum_probs=66.0
Q ss_pred eeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---ee-eeCCCeEEEEECCCCCEEEE-eecCCCCCeeEEEEeC-CCC
Q psy2083 53 AFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VL-SMDSSVVKIWSKDNGSLFTC-IESGDQTQFNNLCHIP-ESG 126 (248)
Q Consensus 53 ~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~-Ssdd~~IKIWD~~tGk~~~t-ie~~h~~~In~l~~~p-dsg 126 (248)
..+.||++--+-+.. .+.....|.+++-||.. ++ +++++.|-+||.+++..-.+ +.. |+++|+.+-|+| ++.
T Consensus 160 ~~~a~~~~p~~t~~~-~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~a-hk~~i~eV~FHpk~p~ 237 (319)
T KOG4714|consen 160 NFYANTLDPIKTLIP-SKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKA-HKAEIWEVHFHPKNPE 237 (319)
T ss_pred ceeeecccccccccc-cccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHH-hhhhhhheeccCCCch
Confidence 567777775433222 22222458999999875 33 45899999999998754444 345 699999999999 667
Q ss_pred EEEEEeCCCeEEEEEcC
Q psy2083 127 MMFIANENKKILTYYIP 143 (248)
Q Consensus 127 ll~sa~ed~~I~~w~Ip 143 (248)
-||++++||.+..|+..
T Consensus 238 ~Lft~sedGslw~wdas 254 (319)
T KOG4714|consen 238 HLFTCSEDGSLWHWDAS 254 (319)
T ss_pred heeEecCCCcEEEEcCC
Confidence 89999999999999865
No 256
>PRK00178 tolB translocation protein TolB; Provisional
Probab=97.45 E-value=0.005 Score=58.14 Aligned_cols=111 Identities=8% Similarity=0.063 Sum_probs=67.8
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeC-C--CeEEEE
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMD-S--SVVKIW 97 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssd-d--~~IKIW 97 (248)
.+....|+|++..++.+.+.++ ...|.+||+.+++......+. .......|+||+ +.+++ + ..|-+|
T Consensus 244 ~~~~~~~SpDG~~la~~~~~~g-----~~~Iy~~d~~~~~~~~lt~~~--~~~~~~~~spDg~~i~f~s~~~g~~~iy~~ 316 (430)
T PRK00178 244 LNGAPAWSPDGSKLAFVLSKDG-----NPEIYVMDLASRQLSRVTNHP--AIDTEPFWGKDGRTLYFTSDRGGKPQIYKV 316 (430)
T ss_pred CcCCeEECCCCCEEEEEEccCC-----CceEEEEECCCCCeEEcccCC--CCcCCeEECCCCCEEEEEECCCCCceEEEE
Confidence 3446788888777654333221 136889999988654433332 345678899997 44554 2 367778
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CC--eEEEEEcC
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NK--KILTYYIP 143 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~--~I~~w~Ip 143 (248)
|..+|+.. .+... .......+|+|||+.|+..+. ++ .|.+|++.
T Consensus 317 d~~~g~~~-~lt~~-~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~ 363 (430)
T PRK00178 317 NVNGGRAE-RVTFV-GNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQ 363 (430)
T ss_pred ECCCCCEE-EeecC-CCCccceEECCCCCEEEEEEccCCceEEEEEECC
Confidence 88888743 33321 222335689999998877764 33 35566643
No 257
>PRK04792 tolB translocation protein TolB; Provisional
Probab=97.43 E-value=0.0042 Score=59.66 Aligned_cols=109 Identities=14% Similarity=0.145 Sum_probs=66.8
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeC-C--CeEEEEE
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMD-S--SVVKIWS 98 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssd-d--~~IKIWD 98 (248)
.....|+||+..++.+.+.++ ...|.+||+.+++......+. ..+....|+||+ +.+++ + ..|-++|
T Consensus 264 ~~~~~wSPDG~~La~~~~~~g-----~~~Iy~~dl~tg~~~~lt~~~--~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~d 336 (448)
T PRK04792 264 NGAPRFSPDGKKLALVLSKDG-----QPEIYVVDIATKALTRITRHR--AIDTEPSWHPDGKSLIFTSERGGKPQIYRVN 336 (448)
T ss_pred cCCeeECCCCCEEEEEEeCCC-----CeEEEEEECCCCCeEECccCC--CCccceEECCCCCEEEEEECCCCCceEEEEE
Confidence 346788898877765433321 125888899988654443332 455778999997 44443 2 3566778
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEc
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYI 142 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~I 142 (248)
..+|+.. .+.. +.....+.+|+|||..|+..+. ++...+|-+
T Consensus 337 l~~g~~~-~Lt~-~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~ 379 (448)
T PRK04792 337 LASGKVS-RLTF-EGEQNLGGSITPDGRSMIMVNRTNGKFNIARQ 379 (448)
T ss_pred CCCCCEE-EEec-CCCCCcCeeECCCCCEEEEEEecCCceEEEEE
Confidence 8877753 3322 0223345789999988877655 454555543
No 258
>PRK01029 tolB translocation protein TolB; Provisional
Probab=97.38 E-value=0.0041 Score=59.43 Aligned_cols=108 Identities=7% Similarity=0.094 Sum_probs=65.0
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEE--EcCC--CceeEEecCCCCCCeeEEEEcCCc--ee-eeC---CCe
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLY--DIRA--DKPLRVKDHMYGLPIRDIKFHDNY--VL-SMD---SSV 93 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~Lw--DlRs--~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssd---d~~ 93 (248)
.....+|+||+..++.+++.+ |...|| ++.. +.+.....+. ..+....|+||+ |+ ++. ...
T Consensus 282 ~~~~p~wSPDG~~Laf~s~~~-------g~~~ly~~~~~~~g~~~~~lt~~~--~~~~~p~wSPDG~~Laf~~~~~g~~~ 352 (428)
T PRK01029 282 TQGNPSFSPDGTRLVFVSNKD-------GRPRIYIMQIDPEGQSPRLLTKKY--RNSSCPAWSPDGKKIAFCSVIKGVRQ 352 (428)
T ss_pred CcCCeEECCCCCEEEEEECCC-------CCceEEEEECcccccceEEeccCC--CCccceeECCCCCEEEEEEcCCCCcE
Confidence 345678999887666554432 344555 5542 2233222222 456788999998 33 333 247
Q ss_pred EEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEE-EeCCCe--EEEEEc
Q psy2083 94 VKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFI-ANENKK--ILTYYI 142 (248)
Q Consensus 94 IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~s-a~ed~~--I~~w~I 142 (248)
|.+||..+|+.. .+..+ ...+.+..|+|||..|+. +..++. |..+++
T Consensus 353 I~v~dl~~g~~~-~Lt~~-~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl 402 (428)
T PRK01029 353 ICVYDLATGRDY-QLTTS-PENKESPSWAIDSLHLVYSAGNSNESELYLISL 402 (428)
T ss_pred EEEEECCCCCeE-EccCC-CCCccceEECCCCCEEEEEECCCCCceEEEEEC
Confidence 999999988764 34331 446678899999987764 444443 444443
No 259
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.38 E-value=0.0051 Score=57.68 Aligned_cols=124 Identities=10% Similarity=0.082 Sum_probs=81.3
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecC-cee-eeecCCeeEEEEcCCCceeEEecCCC------CCCee
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN-KKI-LTYYIPAFYLYDIRADKPLRVKDHMY------GLPIR 77 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d-~~~-~~~~~G~V~LwDlRs~~pl~~~~h~~------~~pI~ 77 (248)
+|..+++.+.++..+. .. ..+ .+||+..+++++.- .++ -|-.+..|.+||+.+.+++....... +..-.
T Consensus 32 iD~~~~~v~g~i~~G~-~P-~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~ 108 (352)
T TIGR02658 32 IDGEAGRVLGMTDGGF-LP-NPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPW 108 (352)
T ss_pred EECCCCEEEEEEEccC-CC-cee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccc
Confidence 6778899999998762 22 233 89998888877770 000 01112489999999999887654321 12234
Q ss_pred EEEEcCCc--ee-ee-C-CCeEEEEECCCCCEEEEeecCCCCC--------eeEEEEeCCCCEEEEEeCC
Q psy2083 78 DIKFHDNY--VL-SM-D-SSVVKIWSKDNGSLFTCIESGDQTQ--------FNNLCHIPESGMMFIANEN 134 (248)
Q Consensus 78 sI~F~~d~--l~-Ss-d-d~~IKIWD~~tGk~~~tie~~h~~~--------In~l~~~pdsgll~sa~ed 134 (248)
...++||+ +. +. + +..|-+.|..+++.+..+.. +.. -+.+.+++||.++....++
T Consensus 109 ~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~v--p~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~ 176 (352)
T TIGR02658 109 MTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDV--PDCYHIFPTANDTFFMHCRDGSLAKVGYGT 176 (352)
T ss_pred eEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeC--CCCcEEEEecCCccEEEeecCceEEEEecC
Confidence 78899997 33 33 4 88999999999999998875 222 2234445677666655543
No 260
>KOG1963|consensus
Probab=97.36 E-value=0.0018 Score=65.48 Aligned_cols=114 Identities=11% Similarity=0.211 Sum_probs=84.2
Q ss_pred cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEE
Q psy2083 19 SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVK 95 (248)
Q Consensus 19 ~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IK 95 (248)
+.|.+.|+++.|+++|++|++||-++ ..-+|-+.++++..- -.-+.||..+.++||+ .+...|+.|.
T Consensus 248 HWH~~~V~~L~fS~~G~~LlSGG~E~--------VLv~Wq~~T~~kqfL--PRLgs~I~~i~vS~ds~~~sl~~~DNqI~ 317 (792)
T KOG1963|consen 248 HWHHDEVNSLSFSSDGAYLLSGGREG--------VLVLWQLETGKKQFL--PRLGSPILHIVVSPDSDLYSLVLEDNQIH 317 (792)
T ss_pred EecccccceeEEecCCceEeecccce--------EEEEEeecCCCcccc--cccCCeeEEEEEcCCCCeEEEEecCceEE
Confidence 33458999999999999999999986 789999999874332 2335899999999997 3345677777
Q ss_pred EEECCCCCEEEEeec---C-------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 96 IWSKDNGSLFTCIES---G-------DQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 96 IWD~~tGk~~~tie~---~-------h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+-...+-....++.+ - ...=.+.+++.|-.+.++..+..+.|+.|+.
T Consensus 318 li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl 374 (792)
T KOG1963|consen 318 LIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDL 374 (792)
T ss_pred EEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEec
Confidence 776655444444443 0 0112346889998888888899999999974
No 261
>KOG4190|consensus
Probab=97.33 E-value=0.00031 Score=68.55 Aligned_cols=120 Identities=15% Similarity=0.242 Sum_probs=79.0
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-c------eeEEecCCCCCCeeEEEEcCCc-e
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-K------PLRVKDHMYGLPIRDIKFHDNY-V 86 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~------pl~~~~h~~~~pI~sI~F~~d~-l 86 (248)
.++-+| +..|..+...++....++++.|+ +|+||.+|.. . +..++ +.|..||++|.|..+. -
T Consensus 729 ~nf~GH-~~~iRai~AidNENSFiSASkDK--------TVKLWSik~EgD~~~tsaCQfTY-~aHkk~i~~igfL~~lr~ 798 (1034)
T KOG4190|consen 729 CNFTGH-QEKIRAIAAIDNENSFISASKDK--------TVKLWSIKPEGDEIGTSACQFTY-QAHKKPIHDIGFLADLRS 798 (1034)
T ss_pred ecccCc-HHHhHHHHhcccccceeeccCCc--------eEEEEEeccccCccccceeeeEh-hhccCcccceeeeeccce
Confidence 344454 67777777666555577777776 9999999974 1 22232 3455899999999987 3
Q ss_pred eeeCCCeEEEEECCCCCEEEEeec--CCCCCeeEEEEeC-CCCEEEEE-eCCCeEEEEEcCC
Q psy2083 87 LSMDSSVVKIWSKDNGSLFTCIES--GDQTQFNNLCHIP-ESGMMFIA-NENKKILTYYIPS 144 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~tGk~~~tie~--~h~~~In~l~~~p-dsgll~sa-~ed~~I~~w~Ip~ 144 (248)
+.+-|+.|.+||+--|+++..++. .|.+.-|-.|+-. +..++.++ +...+|+.++...
T Consensus 799 i~ScD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRs 860 (1034)
T KOG4190|consen 799 IASCDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARS 860 (1034)
T ss_pred eeeccCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeeccc
Confidence 334456689999999998886652 2222222234422 66666666 5668898887543
No 262
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.32 E-value=0.0092 Score=63.37 Aligned_cols=111 Identities=14% Similarity=0.176 Sum_probs=72.9
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCC-----C--------CCeeEEEEcCCc----eee
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMY-----G--------LPIRDIKFHDNY----VLS 88 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~-----~--------~pI~sI~F~~d~----l~S 88 (248)
..+++.|+++.++++...+ +.|++||..++.-......++ + ..-+.|+|+|++ ++.
T Consensus 686 ~gVa~dp~~g~LyVad~~~-------~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVAD 758 (1057)
T PLN02919 686 WDVCFEPVNEKVYIAMAGQ-------HQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIAD 758 (1057)
T ss_pred eEEEEecCCCeEEEEECCC-------CeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEE
Confidence 5788888777777665543 389999998764322111110 0 123568999986 344
Q ss_pred eCCCeEEEEECCCCCEEEEeec-----------C---------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIES-----------G---------DQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~-----------~---------h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+.++.|++||.++|......-+ + .-.....+++.|+|.++++-..+.+|++|+..
T Consensus 759 s~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~ 833 (1057)
T PLN02919 759 SESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPA 833 (1057)
T ss_pred CCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECC
Confidence 5688999999998764211100 0 00124588999999988888889999999863
No 263
>KOG2695|consensus
Probab=97.30 E-value=0.0006 Score=63.29 Aligned_cols=98 Identities=17% Similarity=0.230 Sum_probs=61.7
Q ss_pred CceeEEEecCCCCCeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCCce---eEEecCCCCCCeeEEEEcC---
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRADKP---LRVKDHMYGLPIRDIKFHD--- 83 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p---l~~~~h~~~~pI~sI~F~~--- 83 (248)
|-+.+.+-+. +.|+++.-.. +++.|++++-+ |+|+|||+|.-+. +.++. +-||..+..|
T Consensus 289 ~~~a~rlyh~--Ssvtslq~Lq~s~q~LmaS~M~--------gkikLyD~R~~K~~~~V~qYe----GHvN~~a~l~~~v 354 (425)
T KOG2695|consen 289 GWCAQRLYHD--SSVTSLQILQFSQQKLMASDMT--------GKIKLYDLRATKCKKSVMQYE----GHVNLSAYLPAHV 354 (425)
T ss_pred CcceEEEEcC--cchhhhhhhccccceEeeccCc--------CceeEeeehhhhcccceeeee----ccccccccccccc
Confidence 3444444443 5666666555 34556665555 4999999998655 55552 2244444333
Q ss_pred --C-c-eee-eCCCeEEEEECCCCCEEEEeecC---CCCCeeEEEEe
Q psy2083 84 --N-Y-VLS-MDSSVVKIWSKDNGSLFTCIESG---DQTQFNNLCHI 122 (248)
Q Consensus 84 --d-~-l~S-sdd~~IKIWD~~tGk~~~tie~~---h~~~In~l~~~ 122 (248)
. + |++ +||-..|||.+++|.++.++..- -...|.++||.
T Consensus 355 ~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~s~~e~d~~sv~~~ 401 (425)
T KOG2695|consen 355 KEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPYSASEVDIPSVAFD 401 (425)
T ss_pred ccccceEEEccCeeEEEEEecccCceeeccCCCCccccccccceehh
Confidence 2 2 555 68999999999999999998741 02256667764
No 264
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.29 E-value=0.0044 Score=56.02 Aligned_cols=123 Identities=12% Similarity=0.167 Sum_probs=71.7
Q ss_pred EecCCCCCeeEEEEeCCCCcEEEeecCce---eeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEc-CCceeeeCCC
Q psy2083 17 IESGDQTQFNNLCHIPESGMMFIANENKK---ILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFH-DNYVLSMDSS 92 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~~~g~l~~ag~d~~---~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~-~d~l~Ssdd~ 92 (248)
|..+...+|+++++.|...+|+++|.... .+..+.--+.-|=+=++.|.. ...+. ++.+.. ..+
T Consensus 142 f~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyy-----------k~v~~~~~~~~~-~~~ 209 (282)
T PF15492_consen 142 FSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYY-----------KQVTSSEDDITA-SSK 209 (282)
T ss_pred ecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcE-----------EEccccCccccc-ccc
Confidence 33445678999999998888777766531 000000011223222222211 11111 111211 111
Q ss_pred eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCcc
Q psy2083 93 VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWC 152 (248)
Q Consensus 93 ~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wc 152 (248)
+-.+|..-+.+.+..... ....|-.|.++|||.+|++..-+|+|.+|.||.|-.--+|-
T Consensus 210 ~~~~~~~~~~~~fs~~~~-~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~ 268 (282)
T PF15492_consen 210 RRGLLRIPSFKFFSRQGQ-EQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWK 268 (282)
T ss_pred ccceeeccceeeeecccc-CCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccc
Confidence 223454444444332222 25788999999999999999999999999999999988887
No 265
>KOG1523|consensus
Probab=97.27 E-value=0.0031 Score=58.03 Aligned_cols=110 Identities=8% Similarity=0.182 Sum_probs=83.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc---eeEEe-cCCCCCCeeEEEEcCCc--ee-eeCCCeEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK---PLRVK-DHMYGLPIRDIKFHDNY--VL-SMDSSVVK 95 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~---pl~~~-~h~~~~pI~sI~F~~d~--l~-Ssdd~~IK 95 (248)
..|++-++.+|...++.+.... .|.||...... +..+. +|. ..|+.|.|.|.. |+ ++.|+.--
T Consensus 11 ~pitchAwn~drt~iAv~~~~~--------evhiy~~~~~~~w~~~htls~Hd--~~vtgvdWap~snrIvtcs~drnay 80 (361)
T KOG1523|consen 11 EPITCHAWNSDRTQIAVSPNNH--------EVHIYSMLGADLWEPAHTLSEHD--KIVTGVDWAPKSNRIVTCSHDRNAY 80 (361)
T ss_pred CceeeeeecCCCceEEeccCCc--------eEEEEEecCCCCceeceehhhhC--cceeEEeecCCCCceeEccCCCCcc
Confidence 5788999999887777766665 79999998875 34443 454 899999999987 54 56788888
Q ss_pred EEEC-CCCCEEEEeec-CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 96 IWSK-DNGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 96 IWD~-~tGk~~~tie~-~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+|.. ..|+=..++.- .+....+++.++|+++.+++|+-.+.|.+||.
T Consensus 81 Vw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~ 129 (361)
T KOG1523|consen 81 VWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYY 129 (361)
T ss_pred ccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEE
Confidence 9998 43432222221 12567889999999999999999999999985
No 266
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=97.27 E-value=0.0029 Score=61.98 Aligned_cols=69 Identities=16% Similarity=0.208 Sum_probs=55.4
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWS 98 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD 98 (248)
.+.|.+++++|+...++.|+.|+ +|.|||.+.+.-..++. ....+.|+|||++ +++++.|.+.+||
T Consensus 259 ~s~v~~ca~sp~E~kLvlGC~Dg--------SiiLyD~~~~~t~~~ka---~~~P~~iaWHp~gai~~V~s~qGelQ~FD 327 (545)
T PF11768_consen 259 PSQVICCARSPSEDKLVLGCEDG--------SIILYDTTRGVTLLAKA---EFIPTLIAWHPDGAIFVVGSEQGELQCFD 327 (545)
T ss_pred CCcceEEecCcccceEEEEecCC--------eEEEEEcCCCeeeeeee---cccceEEEEcCCCcEEEEEcCCceEEEEE
Confidence 47889999999888888888885 99999998874444432 2667899999998 6667889999999
Q ss_pred CCC
Q psy2083 99 KDN 101 (248)
Q Consensus 99 ~~t 101 (248)
..-
T Consensus 328 ~AL 330 (545)
T PF11768_consen 328 MAL 330 (545)
T ss_pred eec
Confidence 864
No 267
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=97.24 E-value=0.029 Score=51.79 Aligned_cols=113 Identities=15% Similarity=0.240 Sum_probs=75.5
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeE---EecC---------CCCCCeeEEEEcCCc--eee
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLR---VKDH---------MYGLPIRDIKFHDNY--VLS 88 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~---~~~h---------~~~~pI~sI~F~~d~--l~S 88 (248)
....++..|++.+++++.-.+ |+|.+|++... ++.. ...| +-+.-..++.|+|++ +..
T Consensus 88 ~p~~i~~~~~g~~l~vany~~-------g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v 160 (345)
T PF10282_consen 88 SPCHIAVDPDGRFLYVANYGG-------GSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYV 160 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTT-------TEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEE
T ss_pred CcEEEEEecCCCEEEEEEccC-------CeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEE
Confidence 445677788888888887654 69999999984 3222 1111 122446799999997 555
Q ss_pred eC--CCeEEEEECCCCC--E--EEEeecCCCCCeeEEEEeCCCCEEEEEeCC-CeEEEEEcC
Q psy2083 89 MD--SSVVKIWSKDNGS--L--FTCIESGDQTQFNNLCHIPESGMMFIANEN-KKILTYYIP 143 (248)
Q Consensus 89 sd--d~~IKIWD~~tGk--~--~~tie~~h~~~In~l~~~pdsgll~sa~ed-~~I~~w~Ip 143 (248)
+| ...|.+++.+.+. + ...+........+.++|+||+..+++.++- ++|.+|.++
T Consensus 161 ~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~ 222 (345)
T PF10282_consen 161 PDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYD 222 (345)
T ss_dssp EETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEE
T ss_pred EecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeec
Confidence 43 4478898887654 3 223332114778999999999999988875 789999887
No 268
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=97.18 E-value=0.0014 Score=60.29 Aligned_cols=153 Identities=18% Similarity=0.291 Sum_probs=96.7
Q ss_pred CeeEEEEeCCCCc-EE-EeecCceeeeecCCeeEEEEcCCC-------------------cee-----------------
Q psy2083 24 QFNNLCHIPESGM-MF-IANENKKILTYYIPAFYLYDIRAD-------------------KPL----------------- 65 (248)
Q Consensus 24 ~V~~~~~~~~~g~-l~-~ag~d~~~~~~~~G~V~LwDlRs~-------------------~pl----------------- 65 (248)
.|+.+.++.++|. -| .++.|. +|+||-++.. .|+
T Consensus 87 Kin~I~w~~~t~r~hFLlstNdk--------tiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~i 158 (460)
T COG5170 87 KINAIEWFDDTGRNHFLLSTNDK--------TIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEI 158 (460)
T ss_pred HhhheeeecCCCcceEEEecCCc--------eeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceE
Confidence 5788999988776 33 444454 9999999865 111
Q ss_pred ------EEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCCCC---EEEEeecCCC-----CCeeEEEEeCCC-CEE
Q psy2083 66 ------RVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGS---LFTCIESGDQ-----TQFNNLCHIPES-GMM 128 (248)
Q Consensus 66 ------~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~tGk---~~~tie~~h~-----~~In~l~~~pds-gll 128 (248)
.++...|..-|++|+|+.|. ++|+||=.|.+|+++--. .+..+.| |. .-|++..|+|.- .++
T Consensus 159 iaa~p~rvyaNaH~yhiNSiS~NsD~et~lSaDdLrINLWnl~i~D~sFnIVDiKP-~nmeeLteVItSaeFhp~~cn~f 237 (460)
T COG5170 159 IAAKPCRVYANAHPYHINSISFNSDKETLLSADDLRINLWNLEIIDGSFNIVDIKP-HNMEELTEVITSAEFHPEMCNVF 237 (460)
T ss_pred EEeccceeccccceeEeeeeeecCchheeeeccceeeeeccccccCCceEEEeccC-ccHHHHHHHHhhcccCHhHcceE
Confidence 11222333568999999887 999999999999987422 2334556 23 258999999965 555
Q ss_pred EEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhcc-------ccccccCCceeecH------hHHhhcCCcc
Q psy2083 129 FIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEEN-------IIENVYDDYKFVTR------QELEDLGLGH 189 (248)
Q Consensus 129 ~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~-------~~~~~yd~y~fvt~------~~l~~l~~~~ 189 (248)
+-.+..|.|++-++.+- .-|..--.+.|+.++. ....--.|+||+.. .++-.+.+|.
T Consensus 238 mYSsSkG~Ikl~DlRq~----alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyltvkiwD 307 (460)
T COG5170 238 MYSSSKGEIKLNDLRQS----ALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYLTVKIWD 307 (460)
T ss_pred EEecCCCcEEehhhhhh----hhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccceEEEEe
Confidence 66667899999998741 1233333444444432 12334567777653 3444555543
No 269
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=97.17 E-value=0.012 Score=50.08 Aligned_cols=128 Identities=13% Similarity=0.183 Sum_probs=78.5
Q ss_pred ccchhcCceeEEEecCC-CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEE-EEc
Q psy2083 5 ELRQDKGSLFTCIESGD-QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDI-KFH 82 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~-~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI-~F~ 82 (248)
-+|+.+|+.+-...-.. .+.... ...++++.+++++.++ .+..||+.+++.++.+.-. .++... ...
T Consensus 7 ~~d~~tG~~~W~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~--------~l~~~d~~tG~~~W~~~~~--~~~~~~~~~~ 75 (238)
T PF13360_consen 7 ALDPRTGKELWSYDLGPGIGGPVA-TAVPDGGRVYVASGDG--------NLYALDAKTGKVLWRFDLP--GPISGAPVVD 75 (238)
T ss_dssp EEETTTTEEEEEEECSSSCSSEEE-TEEEETTEEEEEETTS--------EEEEEETTTSEEEEEEECS--SCGGSGEEEE
T ss_pred EEECCCCCEEEEEECCCCCCCccc-eEEEeCCEEEEEcCCC--------EEEEEECCCCCEEEEeecc--ccccceeeec
Confidence 36888899888875421 011111 1333567777775554 8999999999998887643 333332 333
Q ss_pred CCc-eeeeCCCeEEEEECCCCCEEEEe-ecCC-CCC-eeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 83 DNY-VLSMDSSVVKIWSKDNGSLFTCI-ESGD-QTQ-FNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 83 ~d~-l~Ssdd~~IKIWD~~tGk~~~ti-e~~h-~~~-In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
.+. ++.+.++.|..+|..+|+.+-.+ .... ... ........+++.++++..++.|..+++.
T Consensus 76 ~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 140 (238)
T PF13360_consen 76 GGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPK 140 (238)
T ss_dssp TTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETT
T ss_pred ccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecC
Confidence 333 44556779999999999998884 3310 111 1122333347777888878888777744
No 270
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=97.12 E-value=0.0079 Score=55.66 Aligned_cols=88 Identities=10% Similarity=0.150 Sum_probs=57.7
Q ss_pred CCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEE
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMF 129 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~ 129 (248)
+|.|..+|..++++++......+..+.+.....+. ++.+.++.|.+||.++|+.+.++..+ ...+..--...++ .|+
T Consensus 288 ~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~-~~~~~~sp~~~~~-~l~ 365 (377)
T TIGR03300 288 DGVVVALDRRSGSELWKNDELKYRQLTAPAVVGGYLVVGDFEGYLHWLSREDGSFVARLKTD-GSGIASPPVVVGD-GLL 365 (377)
T ss_pred CCeEEEEECCCCcEEEccccccCCccccCEEECCEEEEEeCCCEEEEEECCCCCEEEEEEcC-CCccccCCEEECC-EEE
Confidence 35899999999988876522111122222223333 44567899999999999999998862 3344432223344 488
Q ss_pred EEeCCCeEEEE
Q psy2083 130 IANENKKILTY 140 (248)
Q Consensus 130 sa~ed~~I~~w 140 (248)
+++.|++|..+
T Consensus 366 v~~~dG~l~~~ 376 (377)
T TIGR03300 366 VQTRDGDLYAF 376 (377)
T ss_pred EEeCCceEEEe
Confidence 99999998765
No 271
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=97.09 E-value=0.032 Score=51.50 Aligned_cols=112 Identities=13% Similarity=0.289 Sum_probs=75.1
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC--CCce--eEEec---CCCC--CCeeEEEEcCCc--eee--e
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR--ADKP--LRVKD---HMYG--LPIRDIKFHDNY--VLS--M 89 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR--s~~p--l~~~~---h~~~--~pI~sI~F~~d~--l~S--s 89 (248)
..-..++|+|++..++++++.+ ++|.+|++. .+.. +.... .... ..-..|.++||+ |.. .
T Consensus 192 ~GPRh~~f~pdg~~~Yv~~e~s-------~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr 264 (345)
T PF10282_consen 192 SGPRHLAFSPDGKYAYVVNELS-------NTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNR 264 (345)
T ss_dssp SSEEEEEE-TTSSEEEEEETTT-------TEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEEC
T ss_pred CCCcEEEEcCCcCEEEEecCCC-------CcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEec
Confidence 4567899999888888888775 489999998 3422 22221 1111 146789999998 333 3
Q ss_pred CCCeEEEEEC--CCCCE--EEEeecCCCCCeeEEEEeCCCCEEEEEeCC-CeEEEEEc
Q psy2083 90 DSSVVKIWSK--DNGSL--FTCIESGDQTQFNNLCHIPESGMMFIANEN-KKILTYYI 142 (248)
Q Consensus 90 dd~~IKIWD~--~tGk~--~~tie~~h~~~In~l~~~pdsgll~sa~ed-~~I~~w~I 142 (248)
...+|-++++ .+|++ +..+..+ ....++++++|+|.+|++++++ +.|.+|.+
T Consensus 265 ~~~sI~vf~~d~~~g~l~~~~~~~~~-G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~ 321 (345)
T PF10282_consen 265 GSNSISVFDLDPATGTLTLVQTVPTG-GKFPRHFAFSPDGRYLYVANQDSNTVSVFDI 321 (345)
T ss_dssp TTTEEEEEEECTTTTTEEEEEEEEES-SSSEEEEEE-TTSSEEEEEETTTTEEEEEEE
T ss_pred cCCEEEEEEEecCCCceEEEEEEeCC-CCCccEEEEeCCCCEEEEEecCCCeEEEEEE
Confidence 5779999998 34543 2233331 3457899999999999999865 68999987
No 272
>KOG1645|consensus
Probab=97.07 E-value=0.0025 Score=60.18 Aligned_cols=88 Identities=16% Similarity=0.140 Sum_probs=71.9
Q ss_pred eEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC-CEE
Q psy2083 54 FYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES-GMM 128 (248)
Q Consensus 54 V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds-gll 128 (248)
|+..+--+-+++. ..++++..|++++|+|.. .+.+-++.|||.|.++...+.++.. ...+.++||.-|. ..|
T Consensus 175 v~~l~~~~fkssq-~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a--~~~~wSC~wDlde~h~I 251 (463)
T KOG1645|consen 175 VQKLESHDFKSSQ-ILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIA--YNQIWSCCWDLDERHVI 251 (463)
T ss_pred eEEeccCCcchhh-cccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheec--cCCceeeeeccCCccee
Confidence 5666655556654 557778999999999975 3446789999999999999999988 5899999998755 788
Q ss_pred EEEeCCCeEEEEEcCC
Q psy2083 129 FIANENKKILTYYIPS 144 (248)
Q Consensus 129 ~sa~ed~~I~~w~Ip~ 144 (248)
..|...|.|.+||+..
T Consensus 252 YaGl~nG~VlvyD~R~ 267 (463)
T KOG1645|consen 252 YAGLQNGMVLVYDMRQ 267 (463)
T ss_pred EEeccCceEEEEEccC
Confidence 8888999999999865
No 273
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=97.06 E-value=0.02 Score=53.28 Aligned_cols=130 Identities=17% Similarity=0.262 Sum_probs=89.8
Q ss_pred cccccchhcCceeEE---EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-Cc---eeEEecCCCCC
Q psy2083 2 AAQELRQDKGSLFTC---IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-DK---PLRVKDHMYGL 74 (248)
Q Consensus 2 ~~~~~~~~~G~~~~~---~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~---pl~~~~h~~~~ 74 (248)
||-++|..+|++-.- ...+ +.-.-++..+++..+++++-.. |.|.++-++. |. ++....|. .
T Consensus 67 aay~iD~~~G~Lt~ln~~~~~g--~~p~yvsvd~~g~~vf~AnY~~-------g~v~v~p~~~dG~l~~~v~~~~h~--g 135 (346)
T COG2706 67 AAYRIDPDDGRLTFLNRQTLPG--SPPCYVSVDEDGRFVFVANYHS-------GSVSVYPLQADGSLQPVVQVVKHT--G 135 (346)
T ss_pred EEEEEcCCCCeEEEeeccccCC--CCCeEEEECCCCCEEEEEEccC-------ceEEEEEcccCCccccceeeeecC--C
Confidence 455577776773222 1122 1226777788777888887765 6999999987 43 23334444 3
Q ss_pred C----------eeEEEEcCCc--eeeeCCC--eEEEEECCCCCEEEE----eecCCCCCeeEEEEeCCCCEEEEEeC-CC
Q psy2083 75 P----------IRDIKFHDNY--VLSMDSS--VVKIWSKDNGSLFTC----IESGDQTQFNNLCHIPESGMMFIANE-NK 135 (248)
Q Consensus 75 p----------I~sI~F~~d~--l~Ssdd~--~IKIWD~~tGk~~~t----ie~~h~~~In~l~~~pdsgll~sa~e-d~ 135 (248)
+ +....|.|++ |++.|-+ .|.+++.+.|++... +.+ .+..+.+.|+||+.+..+.+| ++
T Consensus 136 ~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~--G~GPRHi~FHpn~k~aY~v~EL~s 213 (346)
T COG2706 136 SGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKP--GAGPRHIVFHPNGKYAYLVNELNS 213 (346)
T ss_pred CCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCC--CCCcceEEEcCCCcEEEEEeccCC
Confidence 3 8889999998 6666633 466999998875332 334 467899999999999999997 78
Q ss_pred eEEEEEcCC
Q psy2083 136 KILTYYIPS 144 (248)
Q Consensus 136 ~I~~w~Ip~ 144 (248)
+|.+|.+..
T Consensus 214 tV~v~~y~~ 222 (346)
T COG2706 214 TVDVLEYNP 222 (346)
T ss_pred EEEEEEEcC
Confidence 999997543
No 274
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.02 E-value=0.011 Score=55.48 Aligned_cols=90 Identities=13% Similarity=0.064 Sum_probs=67.7
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eeee---------CCCeEEEEECCCCCEEEEeecC-C-----
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLSM---------DSSVVKIWSKDNGSLFTCIESG-D----- 112 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~Ss---------dd~~IKIWD~~tGk~~~tie~~-h----- 112 (248)
|+|.+.|..+.+-+-...-+.. |- .+ ++||+ ++++ ++..|.+||..+++.+..+... .
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~-P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~ 103 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFL-PN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLV 103 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCC-Cc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhc
Confidence 4899999999887766554432 22 24 99996 6667 7899999999999999999841 0
Q ss_pred CCCeeEEEEeCCCCEEEEEeCC--CeEEEEEcCC
Q psy2083 113 QTQFNNLCHIPESGMMFIANEN--KKILTYYIPS 144 (248)
Q Consensus 113 ~~~In~l~~~pdsgll~sa~ed--~~I~~w~Ip~ 144 (248)
....+.++++|||..|++++++ ..|.+.|+.+
T Consensus 104 ~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~ 137 (352)
T TIGR02658 104 GTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEG 137 (352)
T ss_pred cCccceEEECCCCCEEEEecCCCCCEEEEEECCC
Confidence 1123478999999999999854 7788887543
No 275
>KOG1409|consensus
Probab=96.99 E-value=0.0043 Score=57.64 Aligned_cols=81 Identities=12% Similarity=0.249 Sum_probs=60.5
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee-
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS- 88 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S- 88 (248)
..++++.+| .+.++.+++.|..+.+|++.+|. .|.+|||--++-......+|...|..+..-+.. +.|
T Consensus 188 ~~i~~~~~h-~~~~~~l~Wd~~~~~LfSg~~d~--------~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~ 258 (404)
T KOG1409|consen 188 QLITTFNGH-TGEVTCLKWDPGQRLLFSGASDH--------SVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISC 258 (404)
T ss_pred ceEEEEcCc-ccceEEEEEcCCCcEEEeccccC--------ceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeec
Confidence 356666666 89999999999999999998887 799999976654444333444678888776654 555
Q ss_pred eCCCeEEEEECCC
Q psy2083 89 MDSSVVKIWSKDN 101 (248)
Q Consensus 89 sdd~~IKIWD~~t 101 (248)
..|+.|-+||.+.
T Consensus 259 ~edg~i~~w~mn~ 271 (404)
T KOG1409|consen 259 GEDGGIVVWNMNV 271 (404)
T ss_pred cCCCeEEEEeccc
Confidence 4699999999763
No 276
>KOG1354|consensus
Probab=96.99 E-value=0.0029 Score=58.80 Aligned_cols=171 Identities=18% Similarity=0.265 Sum_probs=111.1
Q ss_pred CeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCC--ce---------------------------------eEE
Q psy2083 24 QFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRAD--KP---------------------------------LRV 67 (248)
Q Consensus 24 ~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~--~p---------------------------------l~~ 67 (248)
.|+.+.+.++++. .|..+..++ +|+||-++.. ++ ..+
T Consensus 86 KinkIrw~~~~n~a~FLlstNdk-------tiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv 158 (433)
T KOG1354|consen 86 KINKIRWLDDGNLAEFLLSTNDK-------TIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRV 158 (433)
T ss_pred hhhhceecCCCCccEEEEecCCc-------ceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeee
Confidence 6788999887666 554444433 9999998764 22 223
Q ss_pred ecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCC-CCE--EEEeecCCC-----CCeeEEEEeCCC-CEEEEEeCCCe
Q psy2083 68 KDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDN-GSL--FTCIESGDQ-----TQFNNLCHIPES-GMMFIANENKK 136 (248)
Q Consensus 68 ~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~t-Gk~--~~tie~~h~-----~~In~l~~~pds-gll~sa~ed~~ 136 (248)
+.+.|..-|++|+++.|. .+|+||=.|.+|+++- .+. +.-+.| +. .-|++..|+|.. .+++=.+..|+
T Consensus 159 ~aNaHtyhiNSIS~NsD~Et~lSADdLRINLWnlei~d~sFnIVDIKP-~nmEeLteVITsaEFhp~~cn~f~YSSSKGt 237 (433)
T KOG1354|consen 159 YANAHTYHINSISVNSDKETFLSADDLRINLWNLEIIDQSFNIVDIKP-ANMEELTEVITSAEFHPHHCNVFVYSSSKGT 237 (433)
T ss_pred ccccceeEeeeeeecCccceEeeccceeeeeccccccCCceeEEEccc-cCHHHHHHHHhhhccCHhHccEEEEecCCCc
Confidence 456666789999999997 9999999999999873 222 334445 12 258899999965 66666777899
Q ss_pred EEEEEcCCCCCCCCccccccchhhhhhcccc-------ccccCCceeecH------hHHhhcCCccc-cCC-Ccccccce
Q psy2083 137 ILTYYIPSLGPAPKWCGFLDNLTEELEENII-------ENVYDDYKFVTR------QELEDLGLGHL-IGT-SLLRAYMH 201 (248)
Q Consensus 137 I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~-------~~~yd~y~fvt~------~~l~~l~~~~l-igt-~~l~~ymh 201 (248)
|++-|..+ ..-|.---.+.||-|.... ..--.|.||.-. .+.-.+.+|.| ..+ |.----||
T Consensus 238 IrLcDmR~----~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDyltvk~wD~nme~~pv~t~~vh 313 (433)
T KOG1354|consen 238 IRLCDMRQ----SALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDYLTVKLWDLNMEAKPVETYPVH 313 (433)
T ss_pred EEEeechh----hhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEeccceeEEEeccccCCcceEEeeh
Confidence 99999874 2235555566676665421 222456666553 45666777765 333 33333366
Q ss_pred eeeec
Q psy2083 202 GFFMD 206 (248)
Q Consensus 202 gyf~~ 206 (248)
-|..+
T Consensus 314 ~~lr~ 318 (433)
T KOG1354|consen 314 EYLRS 318 (433)
T ss_pred HhHHH
Confidence 55543
No 277
>KOG4532|consensus
Probab=96.97 E-value=0.019 Score=52.09 Aligned_cols=109 Identities=13% Similarity=0.148 Sum_probs=77.7
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE----e---cCCCCCCeeEEEEcCCc---eeeeCCCe
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV----K---DHMYGLPIRDIKFHDNY---VLSMDSSV 93 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~----~---~h~~~~pI~sI~F~~d~---l~Ssdd~~ 93 (248)
.++++.+++|+.++.++|+.. .|-+|-|-....... . ||+ -+.+|+... .+..-|++
T Consensus 160 ~~ns~~~snd~~~~~~Vgds~--------~Vf~y~id~~sey~~~~~~a~t~D~g-----F~~S~s~~~~~FAv~~Qdg~ 226 (344)
T KOG4532|consen 160 TQNSLHYSNDPSWGSSVGDSR--------RVFRYAIDDESEYIENIYEAPTSDHG-----FYNSFSENDLQFAVVFQDGT 226 (344)
T ss_pred ceeeeEEcCCCceEEEecCCC--------cceEEEeCCccceeeeeEecccCCCc-----eeeeeccCcceEEEEecCCc
Confidence 488999999999888888886 799999876532221 1 333 677788765 55568999
Q ss_pred EEEEECCC-CCEEEEe---ecCCCCCeeEEEEeCCC--CEEEEEeCCCeEEEEEcCCC
Q psy2083 94 VKIWSKDN-GSLFTCI---ESGDQTQFNNLCHIPES--GMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 94 IKIWD~~t-Gk~~~ti---e~~h~~~In~l~~~pds--gll~sa~ed~~I~~w~Ip~l 145 (248)
+-|||+++ +.+...+ .|+|...|+.+.|+|-| .+|+..---+.+++-|...+
T Consensus 227 ~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~ 284 (344)
T KOG4532|consen 227 CAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNY 284 (344)
T ss_pred EEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccC
Confidence 99999987 4444333 34578899999999866 34554444578888886554
No 278
>PRK01029 tolB translocation protein TolB; Provisional
Probab=96.96 E-value=0.02 Score=54.77 Aligned_cols=114 Identities=10% Similarity=0.073 Sum_probs=66.2
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC---ceeEEecCCCCCCeeEEEEcCCc--ee-eeC-CCeEEEE
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD---KPLRVKDHMYGLPIRDIKFHDNY--VL-SMD-SSVVKIW 97 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~---~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssd-d~~IKIW 97 (248)
.....|+||+..|+.+++.. |..+..+.+||+..+ ++....... ........|+||+ |+ +++ ++...||
T Consensus 233 ~~~p~wSPDG~~Laf~s~~~---g~~di~~~~~~~~~g~~g~~~~lt~~~-~~~~~~p~wSPDG~~Laf~s~~~g~~~ly 308 (428)
T PRK01029 233 QLMPTFSPRKKLLAFISDRY---GNPDLFIQSFSLETGAIGKPRRLLNEA-FGTQGNPSFSPDGTRLVFVSNKDGRPRIY 308 (428)
T ss_pred ccceEECCCCCEEEEEECCC---CCcceeEEEeecccCCCCcceEeecCC-CCCcCCeEECCCCCEEEEEECCCCCceEE
Confidence 34567889887776554321 112335666888763 443333221 1234678999997 33 443 5555666
Q ss_pred E--CCC-CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC---CeEEEEEcC
Q psy2083 98 S--KDN-GSLFTCIESGDQTQFNNLCHIPESGMMFIANEN---KKILTYYIP 143 (248)
Q Consensus 98 D--~~t-Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed---~~I~~w~Ip 143 (248)
. ... |.....+.. +...+.+.+|+|||..|+..+.+ ..|.+|++.
T Consensus 309 ~~~~~~~g~~~~~lt~-~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~ 359 (428)
T PRK01029 309 IMQIDPEGQSPRLLTK-KYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLA 359 (428)
T ss_pred EEECcccccceEEecc-CCCCccceeECCCCCEEEEEEcCCCCcEEEEEECC
Confidence 4 332 333444544 24566788999999987766543 367788764
No 279
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=96.95 E-value=0.058 Score=46.90 Aligned_cols=101 Identities=18% Similarity=0.283 Sum_probs=69.8
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce-e---EEe-cCCCCC-CeeEEEEcCCc-eee--eCCCe
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP-L---RVK-DHMYGL-PIRDIKFHDNY-VLS--MDSSV 93 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p-l---~~~-~h~~~~-pI~sI~F~~d~-l~S--sdd~~ 93 (248)
...|.++|+|++..|+.+.+.. +.|.-||+..... + ... +..... ..-.+++..++ |.. ...+.
T Consensus 134 ~~pNGi~~s~dg~~lyv~ds~~-------~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~ 206 (246)
T PF08450_consen 134 GFPNGIAFSPDGKTLYVADSFN-------GRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGR 206 (246)
T ss_dssp SSEEEEEEETTSSEEEEEETTT-------TEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTE
T ss_pred ccccceEECCcchheeeccccc-------ceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCE
Confidence 4679999999988777665554 4899999975322 1 111 111111 25679999887 333 37889
Q ss_pred EEEEECCCCCEEEEeecCCCCCeeEEEEe-CCCCEEEEEe
Q psy2083 94 VKIWSKDNGSLFTCIESGDQTQFNNLCHI-PESGMMFIAN 132 (248)
Q Consensus 94 IKIWD~~tGk~~~tie~~h~~~In~l~~~-pdsgll~sa~ 132 (248)
|.++|.+ |+.+..+... ...++++||. |+.+.|++.+
T Consensus 207 I~~~~p~-G~~~~~i~~p-~~~~t~~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 207 IVVFDPD-GKLLREIELP-VPRPTNCAFGGPDGKTLYVTT 244 (246)
T ss_dssp EEEEETT-SCEEEEEE-S-SSSEEEEEEESTTSSEEEEEE
T ss_pred EEEECCC-ccEEEEEcCC-CCCEEEEEEECCCCCEEEEEe
Confidence 9999998 9999999861 3689999994 7777776654
No 280
>KOG1912|consensus
Probab=96.93 E-value=0.01 Score=60.09 Aligned_cols=108 Identities=19% Similarity=0.236 Sum_probs=73.6
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCC----------CcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCe
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPES----------GMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPI 76 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~----------g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI 76 (248)
|..+-+.+++++.| ++.|+.+.+.|.. ..+..+++|- .|.|-|||.+.+..+....|. ..||
T Consensus 41 Ds~s~q~iqsie~h-~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~------~GrIil~d~~~~s~~~~l~~~-~~~~ 112 (1062)
T KOG1912|consen 41 DSRSLQLIQSIELH-QSAVTSVRWAPAPSPRDLLSPSSSQLLIASADI------SGRIILVDFVLASVINWLSHS-NDSV 112 (1062)
T ss_pred ehhhhhhhhccccC-ccceeEEEeccCCCchhccCccccceeEEeccc------cCcEEEEEehhhhhhhhhcCC-Ccch
Confidence 45566778888887 7999999998732 2233334442 389999999998665555443 4789
Q ss_pred eEEEEcCCc-----ee--eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC
Q psy2083 77 RDIKFHDNY-----VL--SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP 123 (248)
Q Consensus 77 ~sI~F~~d~-----l~--Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p 123 (248)
..++|-+.. ++ -....+|-+|+..+|+.+-...-. .....|+.+.|
T Consensus 113 qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys-~~iLs~f~~DP 165 (1062)
T KOG1912|consen 113 QDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYS-HEILSCFRVDP 165 (1062)
T ss_pred hheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccC-CcceeeeeeCC
Confidence 999987642 22 245678889999999988776651 23334456655
No 281
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=96.92 E-value=0.0017 Score=59.72 Aligned_cols=143 Identities=13% Similarity=0.290 Sum_probs=89.2
Q ss_pred CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeE---EecCCCC---CCeeEEEEcCCc----eee
Q psy2083 20 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLR---VKDHMYG---LPIRDIKFHDNY----VLS 88 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~---~~~h~~~---~pI~sI~F~~d~----l~S 88 (248)
.|.=.++++.|.+|...++++ ++- .|-||.+.-. ..+. ++.|.+. .-|++..|||.. ..|
T Consensus 170 aH~yhiNSiS~NsD~et~lSa-DdL--------rINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYS 240 (460)
T COG5170 170 AHPYHINSISFNSDKETLLSA-DDL--------RINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYS 240 (460)
T ss_pred cceeEeeeeeecCchheeeec-cce--------eeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEe
Confidence 345678899988877666554 443 6999998764 2222 3445432 368999999985 567
Q ss_pred eCCCeEEEEECCCCC-------EEE-Eeec-------CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC----CCCC
Q psy2083 89 MDSSVVKIWSKDNGS-------LFT-CIES-------GDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL----GPAP 149 (248)
Q Consensus 89 sdd~~IKIWD~~tGk-------~~~-tie~-------~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l----G~aP 149 (248)
+..|.||+-|.+... .+. ++.+ +-...|.++.|+|+|.+|++-. =-++++|++..- -..|
T Consensus 241 sSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRd-yltvkiwDvnm~k~pikTi~ 319 (460)
T COG5170 241 SSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRD-YLTVKIWDVNMAKNPIKTIP 319 (460)
T ss_pred cCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEec-cceEEEEecccccCCceeec
Confidence 889999999998321 110 1111 0135788999999999886543 478999998653 2233
Q ss_pred CccccccchhhhhhccccccccCCce
Q psy2083 150 KWCGFLDNLTEELEENIIENVYDDYK 175 (248)
Q Consensus 150 ~wcs~ld~~tee~e~~~~~~~yd~y~ 175 (248)
--|.-.|.|-.-+| ...|||-|.
T Consensus 320 ~h~~l~~~l~d~YE---nDaifdkFe 342 (460)
T COG5170 320 MHCDLMDELNDVYE---NDAIFDKFE 342 (460)
T ss_pred hHHHHHHHHHhhhh---ccceeeeEE
Confidence 33333333333333 355666554
No 282
>KOG4497|consensus
Probab=96.88 E-value=0.0027 Score=58.84 Aligned_cols=104 Identities=13% Similarity=0.210 Sum_probs=74.1
Q ss_pred EEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeee--CCCeEEEEECCCC
Q psy2083 27 NLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSM--DSSVVKIWSKDNG 102 (248)
Q Consensus 27 ~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ss--dd~~IKIWD~~tG 102 (248)
-++|+|+|.++++++.. .+.+=|..+-+-++.+.-- ..|.-|.|..|. ++++ -+..|.+|++..-
T Consensus 13 ~c~fSp~g~yiAs~~~y---------rlviRd~~tlq~~qlf~cl--dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qp 81 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRY---------RLVIRDSETLQLHQLFLCL--DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQP 81 (447)
T ss_pred ceeECCCCCeeeeeeee---------EEEEeccchhhHHHHHHHH--HHhhheeeeccceeeeeeeeccceEEEEEeecc
Confidence 56778877767666555 5777676664332222111 357788898887 5553 4669999999988
Q ss_pred CEEEEeecCCCCCeeEEEEeCCCCEEE-EEeCCCeEEEEEc
Q psy2083 103 SLFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYI 142 (248)
Q Consensus 103 k~~~tie~~h~~~In~l~~~pdsgll~-sa~ed~~I~~w~I 142 (248)
+-...|+-+ ++++.+.+++|||.-|+ +..=|-+|.+|.+
T Consensus 82 ew~ckIdeg-~agls~~~WSPdgrhiL~tseF~lriTVWSL 121 (447)
T KOG4497|consen 82 EWYCKIDEG-QAGLSSISWSPDGRHILLTSEFDLRITVWSL 121 (447)
T ss_pred eeEEEeccC-CCcceeeeECCCcceEeeeecceeEEEEEEe
Confidence 888888864 89999999999995554 4455889999874
No 283
>KOG2079|consensus
Probab=96.87 E-value=0.0042 Score=64.59 Aligned_cols=86 Identities=12% Similarity=0.314 Sum_probs=62.7
Q ss_pred CCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEE---eC
Q psy2083 51 IPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY--VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCH---IP 123 (248)
Q Consensus 51 ~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~--l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~---~p 123 (248)
-|+|.+.|++.. +|+..-++. ++||++++|+.++ ++.+ .+|.|.+||..++++++.+.- |.++...+-+ ..
T Consensus 108 ~ghvl~~d~~~nL~~~~~ne~v-~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e-~~ap~t~vi~v~~t~ 185 (1206)
T KOG2079|consen 108 HGHVLLSDMTGNLGPLHQNERV-QGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITE-HGAPVTGVIFVGRTS 185 (1206)
T ss_pred chhhhhhhhhcccchhhcCCcc-CCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeee-cCCccceEEEEEEeC
Confidence 369999999985 564443333 5899999999998 4444 689999999999999998876 3555555443 23
Q ss_pred CCCEEEEEeCCCeEE
Q psy2083 124 ESGMMFIANENKKIL 138 (248)
Q Consensus 124 dsgll~sa~ed~~I~ 138 (248)
++..++++...|.+.
T Consensus 186 ~nS~llt~D~~Gsf~ 200 (1206)
T KOG2079|consen 186 QNSKLLTSDTGGSFW 200 (1206)
T ss_pred CCcEEEEccCCCceE
Confidence 444777777777643
No 284
>KOG4497|consensus
Probab=96.87 E-value=0.01 Score=55.14 Aligned_cols=99 Identities=10% Similarity=0.118 Sum_probs=71.6
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee-CCCeEEEEECC
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM-DSSVVKIWSKD 100 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss-dd~~IKIWD~~ 100 (248)
|+-+-+.-|+..++.+-.- +|.|.+|++..+.-....+.+ ..++.+++|+||+ +.++ -+-.|.+|...
T Consensus 51 i~yieW~ads~~ilC~~yk-------~~~vqvwsl~Qpew~ckIdeg-~agls~~~WSPdgrhiL~tseF~lriTVWSL~ 122 (447)
T KOG4497|consen 51 IVYIEWKADSCHILCVAYK-------DPKVQVWSLVQPEWYCKIDEG-QAGLSSISWSPDGRHILLTSEFDLRITVWSLN 122 (447)
T ss_pred hhheeeeccceeeeeeeec-------cceEEEEEeecceeEEEeccC-CCcceeeeECCCcceEeeeecceeEEEEEEec
Confidence 3444555566555544333 369999999987665555544 4789999999998 4444 47788999999
Q ss_pred CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC
Q psy2083 101 NGSLFTCIESGDQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 101 tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e 133 (248)
|.+...---+ ...+..++|+|||.+.+.++.
T Consensus 123 t~~~~~~~~p--K~~~kg~~f~~dg~f~ai~sR 153 (447)
T KOG4497|consen 123 TQKGYLLPHP--KTNVKGYAFHPDGQFCAILSR 153 (447)
T ss_pred cceeEEeccc--ccCceeEEECCCCceeeeeec
Confidence 8776554444 567789999999999888874
No 285
>KOG4532|consensus
Probab=96.83 E-value=0.018 Score=52.21 Aligned_cols=93 Identities=16% Similarity=0.095 Sum_probs=62.5
Q ss_pred CCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEE----ecCCCCCCeeEEEEcCCc----eeee-CCCeEEEEECCCCC
Q psy2083 34 SGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRV----KDHMYGLPIRDIKFHDNY----VLSM-DSSVVKIWSKDNGS 103 (248)
Q Consensus 34 ~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~----~~h~~~~pI~sI~F~~d~----l~Ss-dd~~IKIWD~~tGk 103 (248)
...+|+++..+ |++.+||+|.- .|... ++| |.+.|+.+.|++-+ +.-+ .-.-+.+-|.++++
T Consensus 214 ~~~~FAv~~Qd-------g~~~I~DVR~~~tpm~~~sstrp~-hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~ 285 (344)
T KOG4532|consen 214 NDLQFAVVFQD-------GTCAIYDVRNMATPMAEISSTRPH-HNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYV 285 (344)
T ss_pred CcceEEEEecC-------CcEEEEEecccccchhhhcccCCC-CCCceEEEEecCCCcceEEEEecCcceEEEEEcccCc
Confidence 44556555554 69999999984 56543 455 55799999999765 3334 45678999999999
Q ss_pred EEEEeecC------CC-CCeeEEEEeCCCCEEEEEeCC
Q psy2083 104 LFTCIESG------DQ-TQFNNLCHIPESGMMFIANEN 134 (248)
Q Consensus 104 ~~~tie~~------h~-~~In~l~~~pdsgll~sa~ed 134 (248)
..+.+-+- |. ..|...+|+.++.-+.+++++
T Consensus 286 ~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~ 323 (344)
T KOG4532|consen 286 NHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNEL 323 (344)
T ss_pred eeeEEecCccccccccccccccccccCCCcccccccch
Confidence 88877640 11 235566676666666666654
No 286
>KOG0280|consensus
Probab=96.82 E-value=0.0064 Score=55.48 Aligned_cols=92 Identities=10% Similarity=0.099 Sum_probs=61.4
Q ss_pred CCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCce-eEEecCCCCCCeeEEEEcCCc---eee-eCCCeEE
Q psy2083 22 QTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKP-LRVKDHMYGLPIRDIKFHDNY---VLS-MDSSVVK 95 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~p-l~~~~h~~~~pI~sI~F~~d~---l~S-sdd~~IK 95 (248)
+-..+++.|+...-. ++++|+| |.+.-||+|.++. ++.-..-|...|.+|.=+|.. |++ +-|..|+
T Consensus 165 e~E~Wta~f~~~~pnlvytGgDD--------~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~ 236 (339)
T KOG0280|consen 165 EFEAWTAKFSDKEPNLVYTGGDD--------GSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIR 236 (339)
T ss_pred ceeeeeeecccCCCceEEecCCC--------ceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEecccccee
Confidence 567788888765444 4455555 3899999996643 333122333789999988774 554 5788999
Q ss_pred EEECCC-CCEEEEeecCCCCCeeEEEEeC
Q psy2083 96 IWSKDN-GSLFTCIESGDQTQFNNLCHIP 123 (248)
Q Consensus 96 IWD~~t-Gk~~~tie~~h~~~In~l~~~p 123 (248)
+||.++ |+++..-.. ...|.-++.+|
T Consensus 237 ~~DtRnm~kPl~~~~v--~GGVWRi~~~p 263 (339)
T KOG0280|consen 237 VLDTRNMGKPLFKAKV--GGGVWRIKHHP 263 (339)
T ss_pred eeehhcccCccccCcc--ccceEEEEecc
Confidence 999994 777654332 34566666666
No 287
>KOG0882|consensus
Probab=96.74 E-value=0.013 Score=56.24 Aligned_cols=104 Identities=17% Similarity=0.272 Sum_probs=76.3
Q ss_pred CCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--eeeeC-CCeEEEEECCC------CCEEEEeec--------CC
Q psy2083 51 IPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY--VLSMD-SSVVKIWSKDN------GSLFTCIES--------GD 112 (248)
Q Consensus 51 ~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd-d~~IKIWD~~t------Gk~~~tie~--------~h 112 (248)
+|.|-++|-+.. .|...+.-.|-.||..+.+++.+ ++|.| .+.|.-|..+- ++....+.. .-
T Consensus 121 sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~ 200 (558)
T KOG0882|consen 121 SGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKA 200 (558)
T ss_pred CCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhccccc
Confidence 479999999986 35555444445999999999987 66655 78999999872 211111110 01
Q ss_pred CCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhcc
Q psy2083 113 QTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEEN 165 (248)
Q Consensus 113 ~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~ 165 (248)
.....+++|+|+|..+.+-++|.+|.++.. --..+.+|+||.
T Consensus 201 Kt~pts~Efsp~g~qistl~~DrkVR~F~~-----------KtGklvqeiDE~ 242 (558)
T KOG0882|consen 201 KTEPTSFEFSPDGAQISTLNPDRKVRGFVF-----------KTGKLVQEIDEV 242 (558)
T ss_pred ccCccceEEccccCcccccCcccEEEEEEe-----------ccchhhhhhhcc
Confidence 456789999999999999999999999964 356788888886
No 288
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=96.73 E-value=0.0046 Score=35.29 Aligned_cols=39 Identities=15% Similarity=0.373 Sum_probs=29.4
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEE
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYD 58 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwD 58 (248)
++++..+..+ .+.|+.+++.+.+..+++++.++ .|++||
T Consensus 2 ~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~d~--------~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGH-TGPVTSVAFSPDGKYLASASDDG--------TIKLWD 40 (40)
T ss_pred cEEEEEEEec-CCceeEEEECCCCCEEEEecCCC--------eEEEcC
Confidence 4566666655 67899999998776666766664 899997
No 289
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=96.73 E-value=0.12 Score=44.80 Aligned_cols=108 Identities=14% Similarity=0.152 Sum_probs=71.5
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc--eeEEec-CC-CCCCeeEEEEcCCc-ee--eeCC------
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK--PLRVKD-HM-YGLPIRDIKFHDNY-VL--SMDS------ 91 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~--pl~~~~-h~-~~~pI~sI~F~~d~-l~--Ssdd------ 91 (248)
.+.+++..++|.++.+... .+.++|+.+++ ++.... .. .....|.+++.+++ +. .+..
T Consensus 42 ~~G~~~~~~~g~l~v~~~~---------~~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~ 112 (246)
T PF08450_consen 42 PNGMAFDRPDGRLYVADSG---------GIAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGI 112 (246)
T ss_dssp EEEEEEECTTSEEEEEETT---------CEEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCG
T ss_pred CceEEEEccCCEEEEEEcC---------ceEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccc
Confidence 6778887445667776665 36777999984 333331 11 23568899999998 22 2222
Q ss_pred --CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEE-eCCCeEEEEEcCC
Q psy2083 92 --SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIA-NENKKILTYYIPS 144 (248)
Q Consensus 92 --~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa-~ed~~I~~w~Ip~ 144 (248)
+.|-.++.. |+.....+. -...|.++|+||+..|+++ +..++|..|++-.
T Consensus 113 ~~g~v~~~~~~-~~~~~~~~~--~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~ 165 (246)
T PF08450_consen 113 DPGSVYRIDPD-GKVTVVADG--LGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDA 165 (246)
T ss_dssp GSEEEEEEETT-SEEEEEEEE--ESSEEEEEEETTSSEEEEEETTTTEEEEEEEET
T ss_pred cccceEEECCC-CeEEEEecC--cccccceEECCcchheeecccccceeEEEeccc
Confidence 346667777 665555554 5678999999999877654 5668899888754
No 290
>PRK04043 tolB translocation protein TolB; Provisional
Probab=96.62 E-value=0.11 Score=49.73 Aligned_cols=114 Identities=8% Similarity=0.042 Sum_probs=69.8
Q ss_pred CeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee---CCCeEEE
Q psy2083 24 QFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM---DSSVVKI 96 (248)
Q Consensus 24 ~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss---dd~~IKI 96 (248)
....-.|+||+.. ++.++..++ ...|.++|+.++++....... ..+....|+||+ +.+. .+..|-+
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~-----~~~Iyv~dl~tg~~~~lt~~~--g~~~~~~~SPDG~~la~~~~~~g~~~Iy~ 261 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGER-----KPTLYKYNLYTGKKEKIASSQ--GMLVVSDVSKDGSKLLLTMAPKGQPDIYL 261 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCC-----CCEEEEEECCCCcEEEEecCC--CcEEeeEECCCCCEEEEEEccCCCcEEEE
Confidence 4567888898775 554444321 248999999998765544322 445567899997 3332 2346777
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCCCC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPSLG 146 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~lG 146 (248)
+|..+|+ ...+..+ ...-....|+|||..|+..+ ..+.-.+|-++.-|
T Consensus 262 ~dl~~g~-~~~LT~~-~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~ 310 (419)
T PRK04043 262 YDTNTKT-LTQITNY-PGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNS 310 (419)
T ss_pred EECCCCc-EEEcccC-CCccCccEECCCCCEEEEEECCCCCceEEEEECCC
Confidence 8988776 4455541 33223568999997555554 44555555554433
No 291
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.54 E-value=0.24 Score=39.09 Aligned_cols=100 Identities=9% Similarity=0.159 Sum_probs=66.0
Q ss_pred CeeEEEEeCC---CCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEE
Q psy2083 24 QFNNLCHIPE---SGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIW 97 (248)
Q Consensus 24 ~V~~~~~~~~---~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIW 97 (248)
+|+++|+++- +.. |+++++|- .||+|+=.. .+....-. ..|.++.-.... ..+..+++|.++
T Consensus 1 ~V~al~~~d~d~dg~~eLlvGs~D~--------~IRvf~~~e--~~~Ei~e~--~~v~~L~~~~~~~F~Y~l~NGTVGvY 68 (111)
T PF14783_consen 1 NVTALCLFDFDGDGENELLVGSDDF--------EIRVFKGDE--IVAEITET--DKVTSLCSLGGGRFAYALANGTVGVY 68 (111)
T ss_pred CeeEEEEEecCCCCcceEEEecCCc--------EEEEEeCCc--EEEEEecc--cceEEEEEcCCCEEEEEecCCEEEEE
Confidence 3677777752 223 66666664 899987543 44443322 578888777665 556688999999
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCC----EEEEEeCCCeEEE
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESG----MMFIANENKKILT 139 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsg----ll~sa~ed~~I~~ 139 (248)
|.. .-+-.+.. ...+++++++.-.+ .|++|-.+|+|-+
T Consensus 69 ~~~--~RlWRiKS--K~~~~~~~~~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 69 DRS--QRLWRIKS--KNQVTSMAFYDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred eCc--ceeeeecc--CCCeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence 874 44455555 56688888876443 6888888888753
No 292
>KOG2315|consensus
Probab=96.54 E-value=0.025 Score=55.23 Aligned_cols=89 Identities=15% Similarity=0.201 Sum_probs=67.2
Q ss_pred CCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES 125 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds 125 (248)
.-++.++++. +.-..+..-. .+||.++.|++++ |+-+ .-..+-|+|.+ |+++..+- +.+=|.+-|+|.|
T Consensus 250 Eq~Lyll~t~-g~s~~V~L~k-~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~---egpRN~~~fnp~g 323 (566)
T KOG2315|consen 250 EQTLYLLATQ-GESVSVPLLK-EGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFP---EGPRNTAFFNPHG 323 (566)
T ss_pred cceEEEEEec-CceEEEecCC-CCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCC---CCCccceEECCCC
Confidence 3578888888 3333332222 2799999999997 3333 67789999998 88887764 4788999999999
Q ss_pred CEEEEEeC---CCeEEEEEcCCC
Q psy2083 126 GMMFIANE---NKKILTYYIPSL 145 (248)
Q Consensus 126 gll~sa~e---d~~I~~w~Ip~l 145 (248)
++|+.|+= .|.|.+||++..
T Consensus 324 ~ii~lAGFGNL~G~mEvwDv~n~ 346 (566)
T KOG2315|consen 324 NIILLAGFGNLPGDMEVWDVPNR 346 (566)
T ss_pred CEEEEeecCCCCCceEEEeccch
Confidence 99999874 489999999874
No 293
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=96.51 E-value=0.041 Score=56.61 Aligned_cols=126 Identities=8% Similarity=0.152 Sum_probs=80.4
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCc-e-eEEecCCCC--CCeeEE
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADK-P-LRVKDHMYG--LPIRDI 79 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~-p-l~~~~h~~~--~pI~sI 79 (248)
.+|..+|+++....-++...|++++ |++.. -++ ...-++|.++-.+..||.|-.. . +....|+|. ....++
T Consensus 508 ~mDLe~GKVV~eW~~~~~~~v~~~~--p~~K~aqlt--~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~ 583 (794)
T PF08553_consen 508 KMDLERGKVVEEWKVHDDIPVVDIA--PDSKFAQLT--NEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCF 583 (794)
T ss_pred EEecCCCcEEEEeecCCCcceeEec--ccccccccC--CCceEEEECCCceEEeccCCCCCceeeccccccccCCCceEE
Confidence 4788899999998876433455443 32110 001 1112234444479999999753 3 332344443 346677
Q ss_pred EEcCCc--eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC
Q psy2083 80 KFHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK 135 (248)
Q Consensus 80 ~F~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~ 135 (248)
+=+.+| ++++.+|-||++|.- |+.-.|.-|+-..||.+|+++.||..|++.|..-
T Consensus 584 aTt~~G~iavgs~~G~IRLyd~~-g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~ty 640 (794)
T PF08553_consen 584 ATTEDGYIAVGSNKGDIRLYDRL-GKRAKTALPGLGDPIIGIDVTADGKWILATCKTY 640 (794)
T ss_pred EecCCceEEEEeCCCcEEeeccc-chhhhhcCCCCCCCeeEEEecCCCcEEEEeecce
Confidence 777777 778899999999964 5443333332357999999999999999888554
No 294
>KOG0309|consensus
Probab=96.42 E-value=0.0054 Score=61.85 Aligned_cols=133 Identities=20% Similarity=0.275 Sum_probs=82.3
Q ss_pred eeEEEEcCCC-ceeEE-ecCCCCCCeeEEEEcCCc----eeeeCCCeEEEEECCCCC--EEEEeecCCCCCeeEEEEeCC
Q psy2083 53 AFYLYDIRAD-KPLRV-KDHMYGLPIRDIKFHDNY----VLSMDSSVVKIWSKDNGS--LFTCIESGDQTQFNNLCHIPE 124 (248)
Q Consensus 53 ~V~LwDlRs~-~pl~~-~~h~~~~pI~sI~F~~d~----l~Ssdd~~IKIWD~~tGk--~~~tie~~h~~~In~l~~~pd 124 (248)
.|.+||+|.+ .|+.. |.| -..|+++.|+.-. +.++.|++||.||.++.. ...++.. ..+|.--++.|=
T Consensus 181 ~i~vwd~r~gs~pl~s~K~~--vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt--~~piw~~r~~Pf 256 (1081)
T KOG0309|consen 181 DIFVWDLRKGSTPLCSLKGH--VSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTT--NFPIWRGRYLPF 256 (1081)
T ss_pred ceEEEeccCCCcceEEeccc--ceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccc--cCcceecccccc
Confidence 6999999987 67765 454 4889999998653 445689999999987543 2333443 567777788773
Q ss_pred C-CEEEEEeCCC-eEEEEEcCCC----------CCCCCccccccchhhhhhccccc--cccC--CceeecHhHHhhcCCc
Q psy2083 125 S-GMMFIANENK-KILTYYIPSL----------GPAPKWCGFLDNLTEELEENIIE--NVYD--DYKFVTRQELEDLGLG 188 (248)
Q Consensus 125 s-gll~sa~ed~-~I~~w~Ip~l----------G~aP~wcs~ld~~tee~e~~~~~--~~yd--~y~fvt~~~l~~l~~~ 188 (248)
| |+++.....+ .+..+....+ -|.-+...+-|.+.|=|=-...+ .-|| ||..||=+....|.||
T Consensus 257 g~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlW 336 (1081)
T KOG0309|consen 257 GEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLW 336 (1081)
T ss_pred CceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEee
Confidence 3 5555554443 4444442211 22223333344444433222222 3355 8999998888888886
Q ss_pred c
Q psy2083 189 H 189 (248)
Q Consensus 189 ~ 189 (248)
-
T Consensus 337 p 337 (1081)
T KOG0309|consen 337 P 337 (1081)
T ss_pred e
Confidence 4
No 295
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=96.41 E-value=0.08 Score=48.93 Aligned_cols=122 Identities=11% Similarity=0.147 Sum_probs=71.3
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeE-EEEcC
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRD-IKFHD 83 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~s-I~F~~ 83 (248)
.+|+.+|+.+=.+.-+ +.+...... +++.++.++.+ |.+..+|..+++.++..... .++.+ .....
T Consensus 79 a~d~~tG~~~W~~~~~--~~~~~~p~v-~~~~v~v~~~~--------g~l~ald~~tG~~~W~~~~~--~~~~~~p~v~~ 145 (377)
T TIGR03300 79 ALDAETGKRLWRVDLD--ERLSGGVGA-DGGLVFVGTEK--------GEVIALDAEDGKELWRAKLS--SEVLSPPLVAN 145 (377)
T ss_pred EEEccCCcEeeeecCC--CCcccceEE-cCCEEEEEcCC--------CEEEEEECCCCcEeeeeccC--ceeecCCEEEC
Confidence 3566677766554433 112111111 24445554444 58999999999988876433 23322 12223
Q ss_pred Cc-eeeeCCCeEEEEECCCCCEEEEeecCCCCCe------eEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 84 NY-VLSMDSSVVKIWSKDNGSLFTCIESGDQTQF------NNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 84 d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~I------n~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+. ++.+.++.|..||.++|+.+-.++. ..+. .+..+ .++.++++..++++..++..
T Consensus 146 ~~v~v~~~~g~l~a~d~~tG~~~W~~~~--~~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~ 208 (377)
T TIGR03300 146 GLVVVRTNDGRLTALDAATGERLWTYSR--VTPALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQ 208 (377)
T ss_pred CEEEEECCCCeEEEEEcCCCceeeEEcc--CCCceeecCCCCCEE--ECCEEEEECCCCEEEEEEcc
Confidence 33 5556788999999999998777654 2221 11122 23567778888888877754
No 296
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=96.35 E-value=0.048 Score=46.40 Aligned_cols=100 Identities=12% Similarity=0.163 Sum_probs=66.7
Q ss_pred CCeeEEEEcCCCceeEEecCCC--CCCeeEEEEcCCc--eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMY--GLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG 126 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~--~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg 126 (248)
+|+|..||.++++.++...... +.++.. ....++ ++++.++.|..||..+|+.+-+++. +.++...- ..+++
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~--~~~~~~~~-~~~~~ 77 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVAT-AVPDGGRVYVASGDGNLYALDAKTGKVLWRFDL--PGPISGAP-VVDGG 77 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEET-EEEETTEEEEEETTSEEEEEETTTSEEEEEEEC--SSCGGSGE-EEETT
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccce-EEEeCCEEEEEcCCCEEEEEECCCCCEEEEeec--ccccccee-eeccc
Confidence 4799999999999999875431 122211 222333 4455899999999999999988886 34433222 34566
Q ss_pred EEEEEeCCCeEEEEEcCCCCCCCCcccccc
Q psy2083 127 MMFIANENKKILTYYIPSLGPAPKWCGFLD 156 (248)
Q Consensus 127 ll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld 156 (248)
.+++++.++.+..++... -.+.|...+.
T Consensus 78 ~v~v~~~~~~l~~~d~~t--G~~~W~~~~~ 105 (238)
T PF13360_consen 78 RVYVGTSDGSLYALDAKT--GKVLWSIYLT 105 (238)
T ss_dssp EEEEEETTSEEEEEETTT--SCEEEEEEE-
T ss_pred ccccccceeeeEecccCC--cceeeeeccc
Confidence 777888888888888554 3457875443
No 297
>KOG1645|consensus
Probab=96.34 E-value=0.0081 Score=56.81 Aligned_cols=102 Identities=9% Similarity=0.077 Sum_probs=70.6
Q ss_pred CCCeeEEEEeCCCC-cEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeC-CCeEEE
Q psy2083 22 QTQFNNLCHIPESG-MMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMD-SSVVKI 96 (248)
Q Consensus 22 ~~~V~~~~~~~~~g-~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssd-d~~IKI 96 (248)
...|.++.|+|... ++..++-+. +|+|.|+++...+..+.-. .++.+++|.-|. |.+++ .|.|-|
T Consensus 193 g~~IrdlafSp~~~GLl~~asl~n--------kiki~dlet~~~vssy~a~--~~~wSC~wDlde~h~IYaGl~nG~Vlv 262 (463)
T KOG1645|consen 193 GSFIRDLAFSPFNEGLLGLASLGN--------KIKIMDLETSCVVSSYIAY--NQIWSCCWDLDERHVIYAGLQNGMVLV 262 (463)
T ss_pred chhhhhhccCccccceeeeeccCc--------eEEEEecccceeeeheecc--CCceeeeeccCCcceeEEeccCceEEE
Confidence 46889999998654 555666665 8999999998776666543 789999999876 77775 789999
Q ss_pred EECCCCC-EEEEeecCCCCCeeEE---------EEeCCCCEEEEEeCCC
Q psy2083 97 WSKDNGS-LFTCIESGDQTQFNNL---------CHIPESGMMFIANENK 135 (248)
Q Consensus 97 WD~~tGk-~~~tie~~h~~~In~l---------~~~pdsgll~sa~ed~ 135 (248)
+|.+.-+ ++..+.+ ...++.+ ..++-||+++.++.+-
T Consensus 263 yD~R~~~~~~~e~~a--~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~l 309 (463)
T KOG1645|consen 263 YDMRQPEGPLMELVA--NVTINPVHKIAPVQPNKIFTSGGLLVFALTVL 309 (463)
T ss_pred EEccCCCchHhhhhh--hhccCcceeecccCccccccccceEEeeehhh
Confidence 9998532 3333332 1222222 3456788888777664
No 298
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=96.33 E-value=0.15 Score=47.64 Aligned_cols=94 Identities=11% Similarity=0.163 Sum_probs=60.8
Q ss_pred eecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC
Q psy2083 48 TYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG 126 (248)
Q Consensus 48 ~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg 126 (248)
++.+|.+...|..+++.++......+....+.....+. ++.+.++.|...|..+|+.+...+.+ ...+.+--+. .++
T Consensus 300 ~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~-~~~~~s~P~~-~~~ 377 (394)
T PRK11138 300 VDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVLYNGYLVVGDSEGYLHWINREDGRFVAQQKVD-SSGFLSEPVV-ADD 377 (394)
T ss_pred EcCCCeEEEEECCCCcEEEcccccCCCcccCCEEECCEEEEEeCCCEEEEEECCCCCEEEEEEcC-CCcceeCCEE-ECC
Confidence 33446899999999988775432111122222333333 55667899999999999998887641 2334321111 356
Q ss_pred EEEEEeCCCeEEEEEcC
Q psy2083 127 MMFIANENKKILTYYIP 143 (248)
Q Consensus 127 ll~sa~ed~~I~~w~Ip 143 (248)
.|+++++|+++..+..|
T Consensus 378 ~l~v~t~~G~l~~~~~~ 394 (394)
T PRK11138 378 KLLIQARDGTVYAITRP 394 (394)
T ss_pred EEEEEeCCceEEEEeCC
Confidence 78999999999988755
No 299
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.21 E-value=0.059 Score=42.55 Aligned_cols=61 Identities=16% Similarity=0.327 Sum_probs=49.5
Q ss_pred eeEEEEcC---Cc----eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 76 IRDIKFHD---NY----VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 76 I~sI~F~~---d~----l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
|+++++.+ ++ |++|+|..||||+-+ +.+..+.- ...|.+++-.+. +.++-|.++|+|.+|+
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e--~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~ 69 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITE--TDKVTSLCSLGG-GRFAYALANGTVGVYD 69 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEec--ccceEEEEEcCC-CEEEEEecCCEEEEEe
Confidence 56666543 32 788999999999876 88888876 788999998877 6689999999999886
No 300
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=96.16 E-value=0.2 Score=46.67 Aligned_cols=114 Identities=16% Similarity=0.284 Sum_probs=77.4
Q ss_pred CeeEEEEeCCCCcEEEe--ecCceeeeecCCeeEEEEcCCCce--eEEecCCCCCCeeEEEEcCCc----eeeeCCCeEE
Q psy2083 24 QFNNLCHIPESGMMFIA--NENKKILTYYIPAFYLYDIRADKP--LRVKDHMYGLPIRDIKFHDNY----VLSMDSSVVK 95 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~a--g~d~~~~~~~~G~V~LwDlRs~~p--l~~~~h~~~~pI~sI~F~~d~----l~Ssdd~~IK 95 (248)
.+..+.+.|++..++++ |.| .|.+||+..++. .....-..|..=+-|.|||++ +++=-+++|-
T Consensus 146 h~H~a~~tP~~~~l~v~DLG~D---------ri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~ 216 (346)
T COG2706 146 HVHSANFTPDGRYLVVPDLGTD---------RIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVD 216 (346)
T ss_pred ccceeeeCCCCCEEEEeecCCc---------eEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEE
Confidence 37778888988777765 444 699999997742 221111223445889999998 4444588999
Q ss_pred EEECCCC-CEEEEeecC--------CCCCeeEEEEeCCCCEEEEEeCC-CeEEEEEcCCCC
Q psy2083 96 IWSKDNG-SLFTCIESG--------DQTQFNNLCHIPESGMMFIANEN-KKILTYYIPSLG 146 (248)
Q Consensus 96 IWD~~tG-k~~~tie~~--------h~~~In~l~~~pdsgll~sa~ed-~~I~~w~Ip~lG 146 (248)
+|..+.. ..+..++.. .....-.+.++|||..|.+.+.. ..|.+|-|-..|
T Consensus 217 v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~ 277 (346)
T COG2706 217 VLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDG 277 (346)
T ss_pred EEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCC
Confidence 9998872 333443320 13456678899999999988865 578888876643
No 301
>KOG2066|consensus
Probab=96.14 E-value=0.065 Score=54.52 Aligned_cols=86 Identities=13% Similarity=0.241 Sum_probs=59.6
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-------ee-eeCCCeEEEEECCCCCEEEE--eecCCCCCeeEEEE
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-------VL-SMDSSVVKIWSKDNGSLFTC--IESGDQTQFNNLCH 121 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-------l~-Ssdd~~IKIWD~~tGk~~~t--ie~~h~~~In~l~~ 121 (248)
|+|-+--+-+++...+.+.+ .||++|+++|+. .+ ++..| +-+...+=-+...+ +..+ ..+|.+++|
T Consensus 93 Gkv~I~sl~~~~~~~~~df~--rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~-eG~I~~i~W 168 (846)
T KOG2066|consen 93 GKVVIGSLFTDDEITQYDFK--RPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEG-EGPIHSIKW 168 (846)
T ss_pred CcEEEeeccCCccceeEecC--CcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecC-ccceEEEEe
Confidence 58999888888877766544 899999999992 44 44555 55655442122222 2332 679999998
Q ss_pred eCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 122 IPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 122 ~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.|.+|+=|+++| |++|++|.
T Consensus 169 --~g~lIAWand~G-v~vyd~~~ 188 (846)
T KOG2066|consen 169 --RGNLIAWANDDG-VKVYDTPT 188 (846)
T ss_pred --cCcEEEEecCCC-cEEEeccc
Confidence 588999999777 78888653
No 302
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=96.13 E-value=0.089 Score=51.08 Aligned_cols=103 Identities=16% Similarity=0.284 Sum_probs=70.6
Q ss_pred EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeee-----
Q psy2083 17 IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSM----- 89 (248)
Q Consensus 17 ~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ss----- 89 (248)
++.. -+.|-.+..++++..+++++.. +.+.++|+.++++..+--..+ .-|+...|||++ ++=+
T Consensus 397 ~e~~-lg~I~av~vs~dGK~~vvaNdr--------~el~vididngnv~~idkS~~-~lItdf~~~~nsr~iAYafP~gy 466 (668)
T COG4946 397 IEKD-LGNIEAVKVSPDGKKVVVANDR--------FELWVIDIDNGNVRLIDKSEY-GLITDFDWHPNSRWIAYAFPEGY 466 (668)
T ss_pred eeCC-ccceEEEEEcCCCcEEEEEcCc--------eEEEEEEecCCCeeEeccccc-ceeEEEEEcCCceeEEEecCcce
Confidence 3443 4789999999866555555443 389999999998865532233 469999999997 4322
Q ss_pred CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEE
Q psy2083 90 DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIA 131 (248)
Q Consensus 90 dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa 131 (248)
--+.||++|..+||.+..-.+ .+-=-+=+|.|||..|.--
T Consensus 467 ~tq~Iklydm~~~Kiy~vTT~--ta~DfsPaFD~d~ryLYfL 506 (668)
T COG4946 467 YTQSIKLYDMDGGKIYDVTTP--TAYDFSPAFDPDGRYLYFL 506 (668)
T ss_pred eeeeEEEEecCCCeEEEecCC--cccccCcccCCCCcEEEEE
Confidence 256899999999998765544 2222234788999876543
No 303
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=96.12 E-value=0.49 Score=42.97 Aligned_cols=111 Identities=14% Similarity=0.278 Sum_probs=72.0
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc-eeEEecCCCCCCeeEEEEcCCceeeeC-CCeEEEE--
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK-PLRVKDHMYGLPIRDIKFHDNYVLSMD-SSVVKIW-- 97 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~-pl~~~~h~~~~pI~sI~F~~d~l~Ssd-d~~IKIW-- 97 (248)
.+.|.+++.+ +|.++++.+. .|.+|++...+ -+..-.+.....|.++.-..+.++.+| .+.|-++
T Consensus 88 ~g~V~ai~~~--~~~lv~~~g~---------~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~ 156 (321)
T PF03178_consen 88 KGPVTAICSF--NGRLVVAVGN---------KLYVYDLDNSKTLLKKAFYDSPFYITSLSVFKNYILVGDAMKSVSLLRY 156 (321)
T ss_dssp SS-EEEEEEE--TTEEEEEETT---------EEEEEEEETTSSEEEEEEE-BSSSEEEEEEETTEEEEEESSSSEEEEEE
T ss_pred cCcceEhhhh--CCEEEEeecC---------EEEEEEccCcccchhhheecceEEEEEEeccccEEEEEEcccCEEEEEE
Confidence 4689999999 4456665555 79999999887 333323333357888888877755554 5566664
Q ss_pred ECCCCCEEEEeec-CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 98 SKDNGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 98 D~~tGk~~~tie~-~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|.+ ++.+.-+.. ..+..+.+++|-+|+..++++..++.+.++..+.
T Consensus 157 ~~~-~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~ 203 (321)
T PF03178_consen 157 DEE-NNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNP 203 (321)
T ss_dssp ETT-TE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-S
T ss_pred Ecc-CCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECC
Confidence 664 332333321 0145788899987777889999999999998764
No 304
>PRK04043 tolB translocation protein TolB; Provisional
Probab=96.07 E-value=0.26 Score=47.11 Aligned_cols=101 Identities=13% Similarity=0.115 Sum_probs=60.1
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeC-C--CeEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMD-S--SVVKI 96 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssd-d--~~IKI 96 (248)
+.+....|+||+..++.+.+.+ .++.|.++|+.++.+.....+. .....-.|+||+ +.+++ . ..|-+
T Consensus 233 g~~~~~~~SPDG~~la~~~~~~-----g~~~Iy~~dl~~g~~~~LT~~~--~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~ 305 (419)
T PRK04043 233 GMLVVSDVSKDGSKLLLTMAPK-----GQPDIYLYDTNTKTLTQITNYP--GIDVNGNFVEDDKRIVFVSDRLGYPNIFM 305 (419)
T ss_pred CcEEeeEECCCCCEEEEEEccC-----CCcEEEEEECCCCcEEEcccCC--CccCccEECCCCCEEEEEECCCCCceEEE
Confidence 3445577888877655433322 1358999999888644332222 112345799998 44443 2 26778
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN 134 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed 134 (248)
.|..+|+...-...+ .. + ..|+|||+.|+..+..
T Consensus 306 ~dl~~g~~~rlt~~g-~~--~-~~~SPDG~~Ia~~~~~ 339 (419)
T PRK04043 306 KKLNSGSVEQVVFHG-KN--N-SSVSTYKNYIVYSSRE 339 (419)
T ss_pred EECCCCCeEeCccCC-Cc--C-ceECCCCCEEEEEEcC
Confidence 899887763322211 22 2 4899999877666543
No 305
>KOG1275|consensus
Probab=96.03 E-value=0.029 Score=57.83 Aligned_cols=129 Identities=8% Similarity=0.138 Sum_probs=84.2
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCcee-eeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKI-LTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~-~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
|.++-+-+.++..| ++.|.+ |.=.|..|+++|-+.+- .=..|.=|++||||.=+.+.-....+ .| .=+.|+|..
T Consensus 203 D~~s~~~iht~~aH-s~siSD--fDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~-~P-~flrf~Psl 277 (1118)
T KOG1275|consen 203 DPNSFETIHTFDAH-SGSISD--FDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPY-GP-QFLRFHPSL 277 (1118)
T ss_pred cCCcCceeeeeecc-ccceee--eeccCCeEEEeecccccccccccchhhhhhhhhhhccCCccccc-Cc-hhhhhcccc
Confidence 55666677777776 554432 22334557777766543 22345679999999864332111111 22 447788875
Q ss_pred ----eeeeCCCeEEEEECCC-CCE---EEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 86 ----VLSMDSSVVKIWSKDN-GSL---FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 86 ----l~Ssdd~~IKIWD~~t-Gk~---~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
++++..+...+-|..+ +.+ +.-+.++ .+-|..++++++|..|+.+..++.|.+|-
T Consensus 278 ~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~-~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 278 TTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPN-GSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred cceEEEEecccceeeccccccCCCccceeEEccC-CCcceeEEecCCCceEEEecccCcEeeec
Confidence 6667888888888433 333 2233442 45599999999999999999999999995
No 306
>KOG1912|consensus
Probab=95.86 E-value=0.034 Score=56.51 Aligned_cols=106 Identities=12% Similarity=0.232 Sum_probs=78.2
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC-----------c---eeee
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN-----------Y---VLSM 89 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d-----------~---l~Ss 89 (248)
+-+.+.+ .++|+++-|+.+ .|-+-|.|+-+-+....| |...|++|.|.|. . |+++
T Consensus 17 N~~A~Dw-~~~GLiAygshs---------lV~VVDs~s~q~iqsie~-h~s~V~~VrWap~~~p~~llS~~~~~lliAsa 85 (1062)
T KOG1912|consen 17 NRNAADW-SPSGLIAYGSHS---------LVSVVDSRSLQLIQSIEL-HQSAVTSVRWAPAPSPRDLLSPSSSQLLIASA 85 (1062)
T ss_pred ccccccc-CccceEEEecCc---------eEEEEehhhhhhhhcccc-CccceeEEEeccCCCchhccCccccceeEEec
Confidence 3334444 458877766666 689999999877776654 2478999999763 1 5556
Q ss_pred C-CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC---CC-CEEEEEeCCCeEEEEE
Q psy2083 90 D-SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP---ES-GMMFIANENKKILTYY 141 (248)
Q Consensus 90 d-d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p---ds-gll~sa~ed~~I~~w~ 141 (248)
| .|.|-|||...+.....++. |..++.++||.| ++ .+|++-.-...+.+|.
T Consensus 86 D~~GrIil~d~~~~s~~~~l~~-~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwn 141 (1062)
T KOG1912|consen 86 DISGRIILVDFVLASVINWLSH-SNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWN 141 (1062)
T ss_pred cccCcEEEEEehhhhhhhhhcC-CCcchhheeeeeccCcchheeEEecCCcEEEEEE
Confidence 6 67788999999988888887 588999999976 66 4555556677888883
No 307
>KOG1008|consensus
Probab=95.86 E-value=0.004 Score=61.82 Aligned_cols=145 Identities=11% Similarity=0.186 Sum_probs=93.9
Q ss_pred CeeEEEEcCCCcee-EEecCCCCCCeeEEEEcCCc---eeee-----CCCeEEEEECCCC--CEEEEee--cCCCCCeeE
Q psy2083 52 PAFYLYDIRADKPL-RVKDHMYGLPIRDIKFHDNY---VLSM-----DSSVVKIWSKDNG--SLFTCIE--SGDQTQFNN 118 (248)
Q Consensus 52 G~V~LwDlRs~~pl-~~~~h~~~~pI~sI~F~~d~---l~Ss-----dd~~IKIWD~~tG--k~~~tie--~~h~~~In~ 118 (248)
|.|.|--+|...-- +...-+|..+.++++|++-. ++.+ .|..++|||..++ .+..+.. ++.....|+
T Consensus 80 G~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns 159 (783)
T KOG1008|consen 80 GNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNS 159 (783)
T ss_pred CceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccccccCccc
Confidence 58888888875321 33333445899999999752 4444 2668999999987 3333322 111346779
Q ss_pred EEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhccccccccCCceeecHhHHhhcCCccccCCCcccc
Q psy2083 119 LCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRA 198 (248)
Q Consensus 119 l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~~~~yd~y~fvt~~~l~~l~~~~ligt~~l~~ 198 (248)
+|+-.|..++++|...+.+++++..+ - ++..- ++. ++++-.-.+.|
T Consensus 160 ~cwlrd~klvlaGm~sr~~~ifdlRq-------s--~~~~~---------------------svn----Tk~vqG~tVdp 205 (783)
T KOG1008|consen 160 VCWLRDTKLVLAGMTSRSVHIFDLRQ-------S--LDSVS---------------------SVN----TKYVQGITVDP 205 (783)
T ss_pred cccccCcchhhcccccchhhhhhhhh-------h--hhhhh---------------------hhh----hhhcccceecC
Confidence 99999999999999999999997653 1 11110 000 11222235889
Q ss_pred cceeeeechhhHHHHhhhcC-ChhhHHHHHHHHHH
Q psy2083 199 YMHGFFMDIRLYRKAKSVSA-PFEFEEFKKKKIRE 232 (248)
Q Consensus 199 ymhgyf~~~~ly~~~~~~~~-~~~~~~~~~~~~~~ 232 (248)
|-|+||++.. +-..++-+ |+..|.+-+..++.
T Consensus 206 ~~~nY~cs~~--dg~iAiwD~~rnienpl~~i~~~ 238 (783)
T KOG1008|consen 206 FSPNYFCSNS--DGDIAIWDTYRNIENPLQIILRN 238 (783)
T ss_pred CCCCceeccc--cCceeeccchhhhccHHHHHhhC
Confidence 9999999987 44555555 77777776665543
No 308
>KOG1409|consensus
Probab=95.78 E-value=0.12 Score=48.30 Aligned_cols=89 Identities=15% Similarity=0.244 Sum_probs=65.6
Q ss_pred CCCCeeEEEEcCCc--eee-eCCCeEEEEECCCCCEEEEeec-CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC-C
Q psy2083 72 YGLPIRDIKFHDNY--VLS-MDSSVVKIWSKDNGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL-G 146 (248)
Q Consensus 72 ~~~pI~sI~F~~d~--l~S-sdd~~IKIWD~~tGk~~~tie~-~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l-G 146 (248)
|..+|.+++|.+.. +.| +.|..|-+||+- |.....++. +|...|..++..+--..++++++|+.|.+|+...- -
T Consensus 196 h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdig-g~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~r~ 274 (404)
T KOG1409|consen 196 HTGEVTCLKWDPGQRLLFSGASDHSVIMWDIG-GRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVKRV 274 (404)
T ss_pred cccceEEEEEcCCCcEEEeccccCceEEEecc-CCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccceee
Confidence 34889999998876 555 468888899987 444444442 26788998999888999999999999999986544 5
Q ss_pred CCCCccccccchhhhhh
Q psy2083 147 PAPKWCGFLDNLTEELE 163 (248)
Q Consensus 147 ~aP~wcs~ld~~tee~e 163 (248)
..|.|= +++=-|+.+
T Consensus 275 etpewl--~s~~cQ~c~ 289 (404)
T KOG1409|consen 275 ETPEWL--DSDSCQKCN 289 (404)
T ss_pred cCcccc--ccchhhhhC
Confidence 678775 444444444
No 309
>KOG0280|consensus
Probab=95.73 E-value=0.14 Score=46.90 Aligned_cols=76 Identities=14% Similarity=0.207 Sum_probs=55.8
Q ss_pred ecCCCCCCeeEEEEcCCc---ee-eeCCCeEEEEECC-CCCEE-EEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEE
Q psy2083 68 KDHMYGLPIRDIKFHDNY---VL-SMDSSVVKIWSKD-NGSLF-TCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTY 140 (248)
Q Consensus 68 ~~h~~~~pI~sI~F~~d~---l~-Ssdd~~IKIWD~~-tGk~~-~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w 140 (248)
+.|. .++...+|+... |. ++||+.+..||.+ .++.+ +...- |.+.|.|+.-+| ....|++|+-|..|++|
T Consensus 162 k~He--~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kv-H~~GV~SI~ss~~~~~~I~TGsYDe~i~~~ 238 (339)
T KOG0280|consen 162 KVHE--FEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKV-HTSGVVSIYSSPPKPTYIATGSYDECIRVL 238 (339)
T ss_pred cccc--eeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeeccee-eecceEEEecCCCCCceEEEeccccceeee
Confidence 4555 788888887543 44 4699999999999 33332 22344 567777766665 67899999999999999
Q ss_pred EcCCCC
Q psy2083 141 YIPSLG 146 (248)
Q Consensus 141 ~Ip~lG 146 (248)
|...+|
T Consensus 239 DtRnm~ 244 (339)
T KOG0280|consen 239 DTRNMG 244 (339)
T ss_pred ehhccc
Confidence 987654
No 310
>KOG1832|consensus
Probab=95.67 E-value=0.0044 Score=63.62 Aligned_cols=136 Identities=12% Similarity=0.153 Sum_probs=93.3
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-CceeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-DKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
+|..+|....+...| ++.|+.+.=+-++.+++++++.. ..-..|||+.+ +.|.+.++. -++|.|+..
T Consensus 1128 ~nv~sG~~e~s~ncH-~SavT~vePs~dgs~~Ltsss~S------~PlsaLW~~~s~~~~~Hsf~e-----d~~vkFsn~ 1195 (1516)
T KOG1832|consen 1128 FNVSSGSMEESVNCH-QSAVTLVEPSVDGSTQLTSSSSS------SPLSALWDASSTGGPRHSFDE-----DKAVKFSNS 1195 (1516)
T ss_pred EEccCcccccccccc-ccccccccccCCcceeeeecccc------CchHHHhccccccCccccccc-----cceeehhhh
Confidence 566777777776665 78888888888888876655543 24689999987 356555543 378999887
Q ss_pred c---eeeeCCCeEEEEECCCCCEEEEe-ec--CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccch
Q psy2083 85 Y---VLSMDSSVVKIWSKDNGSLFTCI-ES--GDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNL 158 (248)
Q Consensus 85 ~---l~Ssdd~~IKIWD~~tGk~~~ti-e~--~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~ 158 (248)
. ++++......|||++|+.++.++ .+ ..+..=|.+.|+|+..+|+= || .+|++..-...-++=.|-+++
T Consensus 1196 ~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIln---dG--vLWDvR~~~aIh~FD~ft~~~ 1270 (1516)
T KOG1832|consen 1196 LQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLILN---DG--VLWDVRIPEAIHRFDQFTDYG 1270 (1516)
T ss_pred HHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEee---Cc--eeeeeccHHHHhhhhhheecc
Confidence 5 77766567789999999888773 32 01234578999999998873 33 478876655554444444433
No 311
>KOG2395|consensus
Probab=95.59 E-value=0.14 Score=50.28 Aligned_cols=126 Identities=10% Similarity=0.126 Sum_probs=85.3
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCC-cee--EEecCCCCC--CeeE
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRAD-KPL--RVKDHMYGL--PIRD 78 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl--~~~~h~~~~--pI~s 78 (248)
.+|..+|+++..-.-+ ..|+-+.+-|+... .++ +..-++|-++..|.-||.|-. +.. +...|+|.. ...|
T Consensus 360 klDIE~GKIVeEWk~~--~di~mv~~t~d~K~~Ql~--~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc 435 (644)
T KOG2395|consen 360 KLDIERGKIVEEWKFE--DDINMVDITPDFKFAQLT--SEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSC 435 (644)
T ss_pred eeecccceeeeEeecc--CCcceeeccCCcchhccc--ccccEEeecCCceEEecccccCcceeeeeeccccccccccce
Confidence 4889999999997665 34777777776433 222 222346666778999999965 322 334555432 3445
Q ss_pred EEEcCCc--eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC
Q psy2083 79 IKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK 135 (248)
Q Consensus 79 I~F~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~ 135 (248)
.+=..++ +++|.+|-||++|. .|..-.+.-|+-..+|..+..+.||..|+..|+.-
T Consensus 436 ~aTT~sG~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~ty 493 (644)
T KOG2395|consen 436 FATTESGYIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATCKTY 493 (644)
T ss_pred eeecCCceEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEecccE
Confidence 5555666 77789999999998 56544444442357999999999999998887553
No 312
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=95.55 E-value=0.69 Score=45.12 Aligned_cols=94 Identities=19% Similarity=0.204 Sum_probs=69.1
Q ss_pred eeeecCC-eeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc--eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEE
Q psy2083 46 ILTYYIP-AFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY--VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLC 120 (248)
Q Consensus 46 ~~~~~~G-~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~--l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~ 120 (248)
++|+.|| .+-+||.++++.-.. .+- ..|-++..++++ ++.+ +...|-+.|+++|+.. .++.....-|.++.
T Consensus 375 vigt~dgD~l~iyd~~~~e~kr~e~~l---g~I~av~vs~dGK~~vvaNdr~el~vididngnv~-~idkS~~~lItdf~ 450 (668)
T COG4946 375 VIGTNDGDKLGIYDKDGGEVKRIEKDL---GNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVR-LIDKSEYGLITDFD 450 (668)
T ss_pred EEeccCCceEEEEecCCceEEEeeCCc---cceEEEEEcCCCcEEEEEcCceEEEEEEecCCCee-EecccccceeEEEE
Confidence 3566666 899999999864332 332 479999999997 4444 5567888899999753 44432356899999
Q ss_pred EeCCCCEEEEEeCC----CeEEEEEcC
Q psy2083 121 HIPESGMMFIANEN----KKILTYYIP 143 (248)
Q Consensus 121 ~~pdsgll~sa~ed----~~I~~w~Ip 143 (248)
++||+..|+-|--+ ..|++|++-
T Consensus 451 ~~~nsr~iAYafP~gy~tq~Iklydm~ 477 (668)
T COG4946 451 WHPNSRWIAYAFPEGYYTQSIKLYDMD 477 (668)
T ss_pred EcCCceeEEEecCcceeeeeEEEEecC
Confidence 99999999887654 467888864
No 313
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=95.53 E-value=0.26 Score=44.81 Aligned_cols=102 Identities=10% Similarity=0.131 Sum_probs=64.7
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-----cCCCCCCeeEEEEcCCc---------eeee
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-----DHMYGLPIRDIKFHDNY---------VLSM 89 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-----~h~~~~pI~sI~F~~d~---------l~Ss 89 (248)
.=..++|+||+.+|+.+.+. |+|++||+-......+. .-....+|-.+.|.+.. ++-.
T Consensus 45 QWRkl~WSpD~tlLa~a~S~--------G~i~vfdl~g~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~ 116 (282)
T PF15492_consen 45 QWRKLAWSPDCTLLAYAEST--------GTIRVFDLMGSELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVIN 116 (282)
T ss_pred hheEEEECCCCcEEEEEcCC--------CeEEEEecccceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEe
Confidence 34678899987766666555 49999999865333221 12233567778886531 3334
Q ss_pred CCCeEEEEECCC-----CCEEEEee--cCCCCCeeEEEEeCCCCEEEEEeC
Q psy2083 90 DSSVVKIWSKDN-----GSLFTCIE--SGDQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 90 dd~~IKIWD~~t-----Gk~~~tie--~~h~~~In~l~~~pdsgll~sa~e 133 (248)
-++.++=+=+.. .+...++. .+++..|+++++.|..++|++|+.
T Consensus 117 Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~ 167 (282)
T PF15492_consen 117 YRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGC 167 (282)
T ss_pred ccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEecc
Confidence 565555554322 23344444 334679999999999999888864
No 314
>KOG1064|consensus
Probab=95.46 E-value=0.019 Score=62.81 Aligned_cols=117 Identities=10% Similarity=0.100 Sum_probs=81.8
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC--ceeEEecCCCCCCeeEEEEcCCc--
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD--KPLRVKDHMYGLPIRDIKFHDNY-- 85 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~--~pl~~~~h~~~~pI~sI~F~~d~-- 85 (248)
+-+++.+-.-| .....+.+|.. ..++++|.+. .++.|.+||.--+ +.+.-+-|. ..+++++|-|..
T Consensus 2281 ~pk~~~s~qch-nk~~~Df~Fi~--s~~~tag~s~-----d~~n~~lwDtl~~~~~s~v~~~H~--~gaT~l~~~P~~ql 2350 (2439)
T KOG1064|consen 2281 SPKPYTSWQCH-NKALSDFRFIG--SLLATAGRSS-----DNRNVCLWDTLLPPMNSLVHTCHD--GGATVLAYAPKHQL 2350 (2439)
T ss_pred CCcceeccccC-Cccccceeeee--hhhhccccCC-----CCCcccchhcccCcccceeeeecC--CCceEEEEcCcceE
Confidence 34445553333 56677888876 4466655432 3479999996543 334445555 678999999987
Q ss_pred eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCC
Q psy2083 86 VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 86 l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~ 147 (248)
++| +-+|-|++||++..+..++++. +. .-.++++|+..+.|++|.+...|-
T Consensus 2351 lisggr~G~v~l~D~rqrql~h~~~~----------~~-~~~~f~~~ss~g~ikIw~~s~~~l 2402 (2439)
T KOG1064|consen 2351 LISGGRKGEVCLFDIRQRQLRHTFQA----------LD-TREYFVTGSSEGNIKIWRLSEFGL 2402 (2439)
T ss_pred EEecCCcCcEEEeehHHHHHHHHhhh----------hh-hhheeeccCcccceEEEEccccch
Confidence 444 5789999999998887777664 22 456889999999999999876543
No 315
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=95.00 E-value=0.32 Score=47.42 Aligned_cols=109 Identities=11% Similarity=0.134 Sum_probs=75.1
Q ss_pred CCCeeEEEEeCCCCcEEEee-cCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee-C--CCeE
Q psy2083 22 QTQFNNLCHIPESGMMFIAN-ENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM-D--SSVV 94 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag-~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss-d--d~~I 94 (248)
.+.|.+.+|.|.+.-.++.+ -.. .++.++|+|.. +....- ..+=|.+.|+|.. |+.+ + .+.|
T Consensus 274 ~~pVhdf~W~p~S~~F~vi~g~~p-------a~~s~~~lr~N--l~~~~P--e~~rNT~~fsp~~r~il~agF~nl~gni 342 (561)
T COG5354 274 KDPVHDFTWEPLSSRFAVISGYMP-------ASVSVFDLRGN--LRFYFP--EQKRNTIFFSPHERYILFAGFDNLQGNI 342 (561)
T ss_pred cccceeeeecccCCceeEEecccc-------cceeecccccc--eEEecC--CcccccccccCcccEEEEecCCccccce
Confidence 47899999999876654443 332 38999999986 333221 2456889999997 4444 2 5679
Q ss_pred EEEECCCCCEEE-EeecCCCCCeeEEEEeCCCCEEEEEeC------CCeEEEEEcCC
Q psy2083 95 KIWSKDNGSLFT-CIESGDQTQFNNLCHIPESGMMFIANE------NKKILTYYIPS 144 (248)
Q Consensus 95 KIWD~~tGk~~~-tie~~h~~~In~l~~~pdsgll~sa~e------d~~I~~w~Ip~ 144 (248)
-|||+.....+. .+.+ ..-.-+.|+|||.++.++.. |..|.+|+|..
T Consensus 343 ~i~~~~~rf~~~~~~~~---~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g 396 (561)
T COG5354 343 EIFDPAGRFKVAGAFNG---LNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYG 396 (561)
T ss_pred EEeccCCceEEEEEeec---CCceEeeccCCceEEEecCCCcccccCcceEEEEecC
Confidence 999998544333 6665 23334569999999999864 55689999854
No 316
>KOG2314|consensus
Probab=94.99 E-value=0.15 Score=50.31 Aligned_cols=110 Identities=13% Similarity=0.102 Sum_probs=74.5
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee-e-----------CC
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS-M-----------DS 91 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S-s-----------dd 91 (248)
+=+.++|-|.+|++---.+ |.||-=.+-.-++.+.|. .|.-|.|||.. +++ | +.
T Consensus 214 tyv~wSP~GTYL~t~Hk~G---------I~lWGG~~f~r~~RF~Hp---~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~ 281 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQG---------IALWGGESFDRIQRFYHP---GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEG 281 (698)
T ss_pred eeEEecCCceEEEEEeccc---------eeeecCccHHHHHhccCC---CceeeecCCccceEEEecCCccccCcccCCC
Confidence 4567778777676655443 788865554555666774 58999999985 333 1 23
Q ss_pred CeEEEEECCCCCEEEEeec-CCCCCee-EEEEeCCCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 92 SVVKIWSKDNGSLFTCIES-GDQTQFN-NLCHIPESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 92 ~~IKIWD~~tGk~~~tie~-~h~~~In-~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
..+.|||+.||....++.. ..+..+. =+.||.|+.+++--.. ..|.+|.-|.+++-
T Consensus 282 ~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~ll 339 (698)
T KOG2314|consen 282 QQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLL 339 (698)
T ss_pred ceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeee
Confidence 6899999999998887753 0033333 2678889988765443 67889988877543
No 317
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=94.92 E-value=0.075 Score=35.46 Aligned_cols=30 Identities=13% Similarity=0.421 Sum_probs=28.1
Q ss_pred CCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 113 QTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 113 ~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
..+|+.++|+|...+|+.|++++.|.+|.+
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl 40 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL 40 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence 468999999999999999999999999986
No 318
>KOG2041|consensus
Probab=94.91 E-value=0.23 Score=50.55 Aligned_cols=148 Identities=14% Similarity=0.200 Sum_probs=94.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce------eE--------EecCCCCCCeeEEEEcCCc--e
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP------LR--------VKDHMYGLPIRDIKFHDNY--V 86 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p------l~--------~~~h~~~~pI~sI~F~~d~--l 86 (248)
.....+.+..++|+++.+|.|+ .+++--+.+..+ +. ..-.+|...|.-+.|+.+. +
T Consensus 15 vkL~c~~WNke~gyIAcgG~dG--------lLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKL 86 (1189)
T KOG2041|consen 15 VKLHCAEWNKESGYIACGGADG--------LLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKL 86 (1189)
T ss_pred ceEEEEEEcccCCeEEeccccc--------eeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccc
Confidence 5667888888899898888885 778777665422 11 1113556889999999876 8
Q ss_pred eeeC-CCeEEEEECCCCCEEEE-eecCCCCCeeEEEEeCCCCEEEEEeCCCeEE--------EEE--cC-CCCCCCCccc
Q psy2083 87 LSMD-SSVVKIWSKDNGSLFTC-IESGDQTQFNNLCHIPESGMMFIANENKKIL--------TYY--IP-SLGPAPKWCG 153 (248)
Q Consensus 87 ~Ssd-d~~IKIWD~~tGk~~~t-ie~~h~~~In~l~~~pdsgll~sa~ed~~I~--------~w~--Ip-~lG~aP~wcs 153 (248)
.+|| ++.|-+|=..+|.=... +.....+.|.+++|..||.-|..+-+||.|- +|- +. .+-.---|..
T Consensus 87 TtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg~~l~hv~ws~ 166 (1189)
T KOG2041|consen 87 TTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKGQLLAHVLWSE 166 (1189)
T ss_pred cccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcchheccceeecc
Confidence 8886 88999999887752111 1111257788999999999998888888774 332 00 0111223555
Q ss_pred cccchhhhhhccccccccCC-ceeecH
Q psy2083 154 FLDNLTEELEENIIENVYDD-YKFVTR 179 (248)
Q Consensus 154 ~ld~~tee~e~~~~~~~yd~-y~fvt~ 179 (248)
-++-+.--++. ..+-+||+ -.|--+
T Consensus 167 D~~~~Lf~~an-ge~hlydnqgnF~~K 192 (1189)
T KOG2041|consen 167 DLEQALFKKAN-GETHLYDNQGNFERK 192 (1189)
T ss_pred cHHHHHhhhcC-CcEEEecccccHHHh
Confidence 55555555543 34556763 344433
No 319
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=94.74 E-value=0.43 Score=43.33 Aligned_cols=154 Identities=11% Similarity=0.164 Sum_probs=86.3
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEe--CCC----CcEEEeecCcee---eeecCCeeEEEEcCCC-----ceeEEecCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHI--PES----GMMFIANENKKI---LTYYIPAFYLYDIRAD-----KPLRVKDHM 71 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~--~~~----g~l~~ag~d~~~---~~~~~G~V~LwDlRs~-----~pl~~~~h~ 71 (248)
+|+.+...+.+++=.....+++++.. +.+ ..++++|..-.. ..+..|.|.+|++... +......+.
T Consensus 7 ~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~ 86 (321)
T PF03178_consen 7 VDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTE 86 (321)
T ss_dssp EETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEE
T ss_pred EeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEe
Confidence 56667777776541112355555554 332 223333322100 0012289999999994 332233334
Q ss_pred CCCCeeEEEEcCCceeeeCCCeEEEEECCCCC-EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC----C-
Q psy2083 72 YGLPIRDIKFHDNYVLSMDSSVVKIWSKDNGS-LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS----L- 145 (248)
Q Consensus 72 ~~~pI~sI~F~~d~l~Ssdd~~IKIWD~~tGk-~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~----l- 145 (248)
...||.+|+--.+.++.+-.+.|.+|+....+ ....-.-+.+..+.++... +++|++|.--.-|.++..-. |
T Consensus 87 ~~g~V~ai~~~~~~lv~~~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~~~~~l~ 164 (321)
T PF03178_consen 87 VKGPVTAICSFNGRLVVAVGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRYDEENNKLI 164 (321)
T ss_dssp ESS-EEEEEEETTEEEEEETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEEETTTE-EE
T ss_pred ecCcceEhhhhCCEEEEeecCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEEEccCCEEE
Confidence 45899999877655777777889999998877 4332222114566666665 55888888777666553221 1
Q ss_pred ----CCCCCccccccchhhh
Q psy2083 146 ----GPAPKWCGFLDNLTEE 161 (248)
Q Consensus 146 ----G~aP~wcs~ld~~tee 161 (248)
-..|+|+.-.+-|..|
T Consensus 165 ~va~d~~~~~v~~~~~l~d~ 184 (321)
T PF03178_consen 165 LVARDYQPRWVTAAEFLVDE 184 (321)
T ss_dssp EEEEESS-BEEEEEEEE-SS
T ss_pred EEEecCCCccEEEEEEecCC
Confidence 2368998777777443
No 320
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=94.60 E-value=0.13 Score=47.54 Aligned_cols=116 Identities=14% Similarity=0.294 Sum_probs=70.9
Q ss_pred eCCCCcEEEeecCcee-eeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCCCCEEEE
Q psy2083 31 IPESGMMFIANENKKI-LTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTC 107 (248)
Q Consensus 31 ~~~~g~l~~ag~d~~~-~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~tGk~~~t 107 (248)
+||+..++.+....+. -.++.+.+.|||+.+++....... ..++....|+|++ ++-..++-|-+++..+++. ..
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~--~~~~~~~~~sP~g~~~~~v~~~nly~~~~~~~~~-~~ 77 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPP--PPKLQDAKWSPDGKYIAFVRDNNLYLRDLATGQE-TQ 77 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-E--ETTBSEEEE-SSSTEEEEEETTEEEEESSTTSEE-EE
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCC--ccccccceeecCCCeeEEEecCceEEEECCCCCe-EE
Confidence 3555554443332222 445567899999999854332221 3678999999998 6556677888998877743 33
Q ss_pred eecCCC-----------------CCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCCCCCCC
Q psy2083 108 IESGDQ-----------------TQFNNLCHIPESGMMFIAN-ENKKILTYYIPSLGPAP 149 (248)
Q Consensus 108 ie~~h~-----------------~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~lG~aP 149 (248)
+...-. ..-..+-|+|||..|+... +++.|..+.+|..++.+
T Consensus 78 lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~ 137 (353)
T PF00930_consen 78 LTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPD 137 (353)
T ss_dssp SES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSST
T ss_pred eccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCcc
Confidence 322000 1124578999998777664 66889999888877765
No 321
>PRK02888 nitrous-oxide reductase; Validated
Probab=94.32 E-value=1.2 Score=44.98 Aligned_cols=89 Identities=10% Similarity=-0.028 Sum_probs=64.3
Q ss_pred CeeEEEEcCC----Cce-eEEecCCCCCCeeEEEEcCCc---eeee-CCCeEEEEECCCCC------------EEEEeec
Q psy2083 52 PAFYLYDIRA----DKP-LRVKDHMYGLPIRDIKFHDNY---VLSM-DSSVVKIWSKDNGS------------LFTCIES 110 (248)
Q Consensus 52 G~V~LwDlRs----~~p-l~~~~h~~~~pI~sI~F~~d~---l~Ss-dd~~IKIWD~~tGk------------~~~tie~ 110 (248)
++|.+.|.++ +.. +....-+ ..-..|.++||+ ++++ -+.+|.|.|..+.+ .+..++.
T Consensus 296 n~V~VID~~t~~~~~~~v~~yIPVG--KsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevev 373 (635)
T PRK02888 296 SKVPVVDGRKAANAGSALTRYVPVP--KNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPEL 373 (635)
T ss_pred CEEEEEECCccccCCcceEEEEECC--CCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeecc
Confidence 4699999998 333 3322222 445779999998 3333 58899999999855 3566665
Q ss_pred CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 111 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 111 ~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ ..| ...+|.++|....+-.-|++|--|+|..
T Consensus 374 G-lGP-LHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 374 G-LGP-LHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred C-CCc-ceEEECCCCCEEEeEeecceeEEEehHH
Confidence 2 334 4678999999888889999999999765
No 322
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=94.22 E-value=3.6 Score=37.29 Aligned_cols=120 Identities=6% Similarity=-0.001 Sum_probs=74.8
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSM 89 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ss 89 (248)
+++.++.+......-.+.|.+++.++-++|-.++ ..|+.+|+.+++.+....-.....=-.|+...+. .++-
T Consensus 34 ~vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~------S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d~l~qLTW 107 (264)
T PF05096_consen 34 EVVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQ------SSLRKVDLETGKVLQSVPLPPRYFGEGITILGDKLYQLTW 107 (264)
T ss_dssp EEEEEEE--TT-EEEEEEEEETTEEEEEECSTTE------EEEEEEETTTSSEEEEEE-TTT--EEEEEEETTEEEEEES
T ss_pred EEEEECCCCCcccCccEEecCCCEEEEeCCCCCc------EEEEEEECCCCcEEEEEECCccccceeEEEECCEEEEEEe
Confidence 3555555543445556666565544446666543 4899999999987765432222333466666776 6677
Q ss_pred CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 90 DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 90 dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
-+++.-+||.++-+.+.++.- +.+=..+| .|+..|....-+.++..++
T Consensus 108 k~~~~f~yd~~tl~~~~~~~y--~~EGWGLt--~dg~~Li~SDGS~~L~~~d 155 (264)
T PF05096_consen 108 KEGTGFVYDPNTLKKIGTFPY--PGEGWGLT--SDGKRLIMSDGSSRLYFLD 155 (264)
T ss_dssp SSSEEEEEETTTTEEEEEEE---SSS--EEE--ECSSCEEEE-SSSEEEEE-
T ss_pred cCCeEEEEccccceEEEEEec--CCcceEEE--cCCCEEEEECCccceEEEC
Confidence 889999999999999999875 55667777 4566666665577777776
No 323
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=94.17 E-value=0.39 Score=46.47 Aligned_cols=138 Identities=20% Similarity=0.336 Sum_probs=65.3
Q ss_pred eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCe-EEEEEcC------CCCCCCCccccccch
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKK-ILTYYIP------SLGPAPKWCGFLDNL 158 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~-I~~w~Ip------~lG~aP~wcs~ld~~ 158 (248)
+....++.|.+||.++++.+..++. .+|..|.|+++|.+++..+++.- |.-|+.. .-|.. .-+ .+
T Consensus 120 L~~~~~~~i~~yDw~~~~~i~~i~v---~~vk~V~Ws~~g~~val~t~~~i~il~~~~~~~~~~~~~g~e----~~f-~~ 191 (443)
T PF04053_consen 120 LGVKSSDFICFYDWETGKLIRRIDV---SAVKYVIWSDDGELVALVTKDSIYILKYNLEAVAAIPEEGVE----DAF-EL 191 (443)
T ss_dssp EEEEETTEEEEE-TTT--EEEEESS----E-EEEEE-TTSSEEEEE-S-SEEEEEE-HHHHHHBTTTB-G----GGE-EE
T ss_pred EEEECCCCEEEEEhhHcceeeEEec---CCCcEEEEECCCCEEEEEeCCeEEEEEecchhcccccccCch----hce-EE
Confidence 3334555799999999999999986 34999999999999999987742 2333321 10110 011 12
Q ss_pred hhhhhccccccccC--CceeecHhHHhhcCCccccCC------Ccc-cccceeeee-chhhH---H--HHhhhcCChhhH
Q psy2083 159 TEELEENIIENVYD--DYKFVTRQELEDLGLGHLIGT------SLL-RAYMHGFFM-DIRLY---R--KAKSVSAPFEFE 223 (248)
Q Consensus 159 tee~e~~~~~~~yd--~y~fvt~~~l~~l~~~~ligt------~~l-~~ymhgyf~-~~~ly---~--~~~~~~~~~~~~ 223 (248)
..|..+.-.+-+++ -+-|.|.. .|.- |+|. .+- .-|+=||.= ..++| + .+..+.=+...=
T Consensus 192 ~~E~~~~IkSg~W~~d~fiYtT~~---~lkY--l~~Ge~~~i~~ld~~~yllgy~~~~~~ly~~Dr~~~v~~~~ld~~~~ 266 (443)
T PF04053_consen 192 IHEISERIKSGCWVEDCFIYTTSN---HLKY--LVNGETGIIAHLDKPLYLLGYLPKENRLYLIDRDGNVISYELDLSEL 266 (443)
T ss_dssp EEEE-S--SEEEEETTEEEEE-TT---EEEE--EETTEEEEEEE-SS--EEEEEETTTTEEEEE-TT--EEEEE--HHHH
T ss_pred EEEecceeEEEEEEcCEEEEEcCC---eEEE--EEcCCcceEEEcCCceEEEEEEccCCEEEEEECCCCEEEEEECHHHH
Confidence 22322333344433 34445555 3333 4432 111 123334432 12332 1 344455566777
Q ss_pred HHHHHHHHHHHHH
Q psy2083 224 EFKKKKIRERIEQ 236 (248)
Q Consensus 224 ~~~~~~~~~~~~~ 236 (248)
+|+...+++.+++
T Consensus 267 ~fk~av~~~d~~~ 279 (443)
T PF04053_consen 267 EFKTAVLRGDFEE 279 (443)
T ss_dssp HHHHHHHTT-HHH
T ss_pred HHHHHHHcCChhh
Confidence 8888888888887
No 324
>KOG3621|consensus
Probab=94.01 E-value=0.52 Score=47.60 Aligned_cols=98 Identities=10% Similarity=0.061 Sum_probs=67.1
Q ss_pred eeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEECCCCCE-----EEEeecCCCCCeeE
Q psy2083 47 LTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWSKDNGSL-----FTCIESGDQTQFNN 118 (248)
Q Consensus 47 ~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~-----~~tie~~h~~~In~ 118 (248)
+|++.|.|.||.=..+.....+.-+-..-+..+..|++. +++++.+.|-++-...+.+ ++.....|+..|++
T Consensus 50 ~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTa 129 (726)
T KOG3621|consen 50 MGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTA 129 (726)
T ss_pred EecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEE
Confidence 333446999998777765555543322345556677765 4456888898888776432 22233235788999
Q ss_pred EEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 119 LCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 119 l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++|++|+..+++|...|+|..--+..
T Consensus 130 l~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 130 LEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred EEecccccEEeecCCCceEEEEEech
Confidence 99999999999999999998765443
No 325
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=94.01 E-value=2.4 Score=39.15 Aligned_cols=127 Identities=10% Similarity=0.120 Sum_probs=79.8
Q ss_pred cccchhcCceeEEEecCCCCCee-EEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEe-cCCCCCCeeEEE
Q psy2083 4 QELRQDKGSLFTCIESGDQTQFN-NLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVK-DHMYGLPIRDIK 80 (248)
Q Consensus 4 ~~~~~~~G~~~~~~~~~~~~~V~-~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~-~h~~~~pI~sI~ 80 (248)
.-||..+|+..+.+.....-.-+ -.+|++|+.+|+++-.|- .+..|.|-+||.+.+ +-+-.+ .|+ -.=..|.
T Consensus 31 ~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~---~~g~G~IgVyd~~~~~~ri~E~~s~G--IGPHel~ 105 (305)
T PF07433_consen 31 LVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDY---ETGRGVIGVYDAARGYRRIGEFPSHG--IGPHELL 105 (305)
T ss_pred EEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEecccc---CCCcEEEEEEECcCCcEEEeEecCCC--cChhhEE
Confidence 44788899988887643211222 456778887788764442 345689999999944 333333 222 2234566
Q ss_pred EcCCc--eeee-------------------CCCeEEEEECCCCCEEEEeec---CCCCCeeEEEEeCCCCEEEEEeCCC
Q psy2083 81 FHDNY--VLSM-------------------DSSVVKIWSKDNGSLFTCIES---GDQTQFNNLCHIPESGMMFIANENK 135 (248)
Q Consensus 81 F~~d~--l~Ss-------------------dd~~IKIWD~~tGk~~~tie~---~h~~~In~l~~~pdsgll~sa~ed~ 135 (248)
+.||+ |+-+ .+-.+-.-|..+|+.+...+. .|..+|+.+++.++|..++..-.++
T Consensus 106 l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg 184 (305)
T PF07433_consen 106 LMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQG 184 (305)
T ss_pred EcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCC
Confidence 66664 2111 123444568888998887542 2467899999999987776665444
No 326
>KOG2395|consensus
Probab=93.94 E-value=0.48 Score=46.71 Aligned_cols=93 Identities=19% Similarity=0.323 Sum_probs=64.0
Q ss_pred eeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----------eeeeCCCeEEEEECCC-CC-EEEEeecC---CCCCee
Q psy2083 53 AFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----------VLSMDSSVVKIWSKDN-GS-LFTCIESG---DQTQFN 117 (248)
Q Consensus 53 ~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----------l~Ssdd~~IKIWD~~t-Gk-~~~tie~~---h~~~In 117 (248)
.+.=-||..|+-+-..... ..|+-+.+.|+. +++-+++.|-=||++- |+ .+...+++ .....+
T Consensus 357 ~l~klDIE~GKIVeEWk~~--~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFs 434 (644)
T KOG2395|consen 357 KLYKLDIERGKIVEEWKFE--DDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFS 434 (644)
T ss_pred cceeeecccceeeeEeecc--CCcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccccccccc
Confidence 5677799999877664333 337778888763 6776788888899883 44 23333331 023455
Q ss_pred EEEEeCCCCEEEEEeCCCeEEEEE---------cCCCCCC
Q psy2083 118 NLCHIPESGMMFIANENKKILTYY---------IPSLGPA 148 (248)
Q Consensus 118 ~l~~~pdsgll~sa~ed~~I~~w~---------Ip~lG~a 148 (248)
|++- ..+|.|++|+.+|.|++|+ +|.||.|
T Consensus 435 c~aT-T~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~ 473 (644)
T KOG2395|consen 435 CFAT-TESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDA 473 (644)
T ss_pred eeee-cCCceEEEeecCCcEEeehhhhhhhhhcccccCCc
Confidence 5444 4667899999999999998 7888877
No 327
>KOG2066|consensus
Probab=93.75 E-value=0.26 Score=50.29 Aligned_cols=92 Identities=18% Similarity=0.120 Sum_probs=67.0
Q ss_pred eecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCC
Q psy2083 48 TYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPE 124 (248)
Q Consensus 48 ~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pd 124 (248)
||-.|.|.++|..- .|-..++|.. . ..++ ++ +|+||.|-|-...+++..+++.- ..+|++++++||
T Consensus 55 GtH~g~v~~~~~~~-~~~~~~~~s~---~-----~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df--~rpiksial~Pd 123 (846)
T KOG2066|consen 55 GTHRGAVYLTTCQG-NPKTNFDHSS---S-----ILEGEYVASCSDDGKVVIGSLFTDDEITQYDF--KRPIKSIALHPD 123 (846)
T ss_pred ccccceEEEEecCC-cccccccccc---c-----ccCCceEEEecCCCcEEEeeccCCccceeEec--CCcceeEEeccc
Confidence 33446899998864 3444456641 1 3334 44 56899999999999999999988 789999999998
Q ss_pred -----CCEEEEEeCCCeEEEEEcCCCCCCCCccccccch
Q psy2083 125 -----SGMMFIANENKKILTYYIPSLGPAPKWCGFLDNL 158 (248)
Q Consensus 125 -----sgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~ 158 (248)
++.+++|+..| +.++- -+|=...+.+
T Consensus 124 ~~~~~sk~fv~GG~ag-lvL~e-------r~wlgnk~~v 154 (846)
T KOG2066|consen 124 FSRQQSKQFVSGGMAG-LVLSE-------RNWLGNKDSV 154 (846)
T ss_pred hhhhhhhheeecCcce-EEEeh-------hhhhcCccce
Confidence 79999999988 66663 4455555555
No 328
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=93.29 E-value=1 Score=46.57 Aligned_cols=87 Identities=16% Similarity=0.248 Sum_probs=60.2
Q ss_pred eeEEEEcCCCceeEEecCCCCCCeeEEEEc-------CCc-eeeeCCCeEEEEECCCC--CEEEEeecC---CCCCeeEE
Q psy2083 53 AFYLYDIRADKPLRVKDHMYGLPIRDIKFH-------DNY-VLSMDSSVVKIWSKDNG--SLFTCIESG---DQTQFNNL 119 (248)
Q Consensus 53 ~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~-------~d~-l~Ssdd~~IKIWD~~tG--k~~~tie~~---h~~~In~l 119 (248)
.|.-.||..|+-+....-....||.+++-. +.. +++-+++.+--||++-. +++.+ +.+ .....+|+
T Consensus 505 ~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~-~~k~Y~~~~~Fs~~ 583 (794)
T PF08553_consen 505 KLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDS-QSKQYSSKNNFSCF 583 (794)
T ss_pred ceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeec-cccccccCCCceEE
Confidence 788899999998877654445667777543 222 77778888889999863 23321 110 13567766
Q ss_pred EEeCCCCEEEEEeCCCeEEEEE
Q psy2083 120 CHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 120 ~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+-. ..|.|++|+.+|.|++|+
T Consensus 584 aTt-~~G~iavgs~~G~IRLyd 604 (794)
T PF08553_consen 584 ATT-EDGYIAVGSNKGDIRLYD 604 (794)
T ss_pred Eec-CCceEEEEeCCCcEEeec
Confidence 654 446799999999999998
No 329
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=92.96 E-value=2 Score=45.32 Aligned_cols=114 Identities=11% Similarity=0.141 Sum_probs=72.4
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC--CCCCCeeEEEEcCCc-----eeeeCCCeE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH--MYGLPIRDIKFHDNY-----VLSMDSSVV 94 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h--~~~~pI~sI~F~~d~-----l~Ssdd~~I 94 (248)
...|..+.|++++..|+..-.+ .|.||-...-.......- .....+..+.|||.. +++.+.+..
T Consensus 304 ~~~v~~l~Wn~ds~iLAv~~~~---------~vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~ 374 (928)
T PF04762_consen 304 EEKVIELAWNSDSEILAVWLED---------RVQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYE 374 (928)
T ss_pred CceeeEEEECCCCCEEEEEecC---------CceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEE
Confidence 4578889999988877776655 599999887655433211 112346669999864 333333322
Q ss_pred EE---EECCCCC--------EEEEeec----------------------CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 95 KI---WSKDNGS--------LFTCIES----------------------GDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 95 KI---WD~~tGk--------~~~tie~----------------------~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
.. |+...+. .+..+.+ .-+++|++++|++++..+++-..|++|.+|.
T Consensus 375 ~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~ 454 (928)
T PF04762_consen 375 IYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRFAVLTSDGSLSIYE 454 (928)
T ss_pred EEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCCeEEEEECCCCEEEEE
Confidence 21 4443221 1222222 0157899999999998899999999999998
Q ss_pred cCC
Q psy2083 142 IPS 144 (248)
Q Consensus 142 Ip~ 144 (248)
.+.
T Consensus 455 ~~~ 457 (928)
T PF04762_consen 455 WDL 457 (928)
T ss_pred ecC
Confidence 543
No 330
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=92.92 E-value=1.4 Score=41.16 Aligned_cols=125 Identities=12% Similarity=0.089 Sum_probs=70.1
Q ss_pred EEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee-C----------CC
Q psy2083 27 NLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM-D----------SS 92 (248)
Q Consensus 27 ~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss-d----------d~ 92 (248)
...++|++..++-+-+.+ |+...+|+++|+.+++.+...-.. ..-.++.|.+++ +.+. + ..
T Consensus 128 ~~~~Spdg~~la~~~s~~---G~e~~~l~v~Dl~tg~~l~d~i~~--~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~ 202 (414)
T PF02897_consen 128 GFSVSPDGKRLAYSLSDG---GSEWYTLRVFDLETGKFLPDGIEN--PKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPR 202 (414)
T ss_dssp EEEETTTSSEEEEEEEET---TSSEEEEEEEETTTTEEEEEEEEE--EESEEEEECTTSSEEEEEECSTTTSS-CCGCCE
T ss_pred eeeECCCCCEEEEEecCC---CCceEEEEEEECCCCcCcCCcccc--cccceEEEeCCCCEEEEEEeCcccccccCCCCc
Confidence 456677776655332211 122248999999999776543111 112349999995 3333 2 33
Q ss_pred eEEEEECCCCCE--EEEeecCCCCC-eeEEEEeCCCCEEEEEeCC-Ce-EEEEEcCCCC---CCCCcccccc
Q psy2083 93 VVKIWSKDNGSL--FTCIESGDQTQ-FNNLCHIPESGMMFIANEN-KK-ILTYYIPSLG---PAPKWCGFLD 156 (248)
Q Consensus 93 ~IKIWD~~tGk~--~~tie~~h~~~-In~l~~~pdsgll~sa~ed-~~-I~~w~Ip~lG---~aP~wcs~ld 156 (248)
.|..|.+.++.. ...++..+..- .-++..++|+..|++.+.. .. -.+|.++.-. +...|.-...
T Consensus 203 ~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~ 274 (414)
T PF02897_consen 203 QVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSP 274 (414)
T ss_dssp EEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEE
T ss_pred EEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeC
Confidence 588888877643 24455411222 5578899999998865543 44 6777776644 3455554433
No 331
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=92.74 E-value=4.9 Score=35.92 Aligned_cols=108 Identities=19% Similarity=0.362 Sum_probs=64.3
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC---CceeEEe---cC----CCCCCeeEEEEcCCc----ee
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA---DKPLRVK---DH----MYGLPIRDIKFHDNY----VL 87 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs---~~pl~~~---~h----~~~~pI~sI~F~~d~----l~ 87 (248)
+..+-.+++.+.++.++++-+.+ -.+||-++. +..+... ++ ..-..+.+|+|+|.. |+
T Consensus 117 N~G~EGla~D~~~~~L~v~kE~~--------P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliL 188 (248)
T PF06977_consen 117 NKGFEGLAYDPKTNRLFVAKERK--------PKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLIL 188 (248)
T ss_dssp SS--EEEEEETTTTEEEEEEESS--------SEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEE
T ss_pred CcceEEEEEcCCCCEEEEEeCCC--------ChhhEEEccccCccceeeccccccccccceeccccceEEcCCCCeEEEE
Confidence 45688999999888888887765 567888775 3222221 11 112457889999985 77
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCC---------CCeeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQ---------TQFNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~---------~~In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
|..++.|-+.| .+|+++..+.-. . ...-.+||.|+| .|.+.+|-+....|
T Consensus 189 S~es~~l~~~d-~~G~~~~~~~L~-~g~~gl~~~~~QpEGIa~d~~G-~LYIvsEpNlfy~f 247 (248)
T PF06977_consen 189 SDESRLLLELD-RQGRVVSSLSLD-RGFHGLSKDIPQPEGIAFDPDG-NLYIVSEPNLFYRF 247 (248)
T ss_dssp ETTTTEEEEE--TT--EEEEEE-S-TTGGG-SS---SEEEEEE-TT---EEEEETTTEEEEE
T ss_pred ECCCCeEEEEC-CCCCEEEEEEeC-CcccCcccccCCccEEEECCCC-CEEEEcCCceEEEe
Confidence 88899999999 569988877641 1 135579999987 56667776654443
No 332
>KOG2314|consensus
Probab=92.70 E-value=0.98 Score=44.76 Aligned_cols=106 Identities=9% Similarity=0.063 Sum_probs=63.0
Q ss_pred CCeeEEEEeCCCCcEEEeecCceee---eecCCeeEEEEcCCCceeEEecC-CCCCCee-EEEEcCCc--eeeeCCCeEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKIL---TYYIPAFYLYDIRADKPLRVKDH-MYGLPIR-DIKFHDNY--VLSMDSSVVK 95 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~---~~~~G~V~LwDlRs~~pl~~~~h-~~~~pI~-sI~F~~d~--l~Ssdd~~IK 95 (248)
..|--+.|+|...+|++=+....+. -..-.++.|||||+|.....+.- .-+.++. =..||.|. ++..--.+|.
T Consensus 250 p~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~sis 329 (698)
T KOG2314|consen 250 PGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGNSIS 329 (698)
T ss_pred CCceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEeccceEE
Confidence 3678888899877787654432100 00114899999999965443211 0112222 34577665 5555567899
Q ss_pred EEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEE
Q psy2083 96 IWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMF 129 (248)
Q Consensus 96 IWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~ 129 (248)
|++..+-.++-.=.-. ...|.++.|+|.+.+|+
T Consensus 330 IyEtpsf~lld~Kslk-i~gIr~FswsP~~~llA 362 (698)
T KOG2314|consen 330 IYETPSFMLLDKKSLK-ISGIRDFSWSPTSNLLA 362 (698)
T ss_pred EEecCceeeecccccC-CccccCcccCCCcceEE
Confidence 9998753332211111 36789999999988775
No 333
>PRK02888 nitrous-oxide reductase; Validated
Probab=92.63 E-value=1.2 Score=44.81 Aligned_cols=81 Identities=15% Similarity=0.202 Sum_probs=52.7
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCcee----------EEecCCCCCCeeEEEE
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPL----------RVKDHMYGLPIRDIKF 81 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl----------~~~~h~~~~pI~sI~F 81 (248)
+.+.++.-+ .....+.++||+.+++++|..+ ++|.++|+.+-+.+ ....-.-|..=.-.+|
T Consensus 312 ~v~~yIPVG--KsPHGV~vSPDGkylyVanklS-------~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGPLHTaF 382 (635)
T PRK02888 312 ALTRYVPVP--KNPHGVNTSPDGKYFIANGKLS-------PTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGPLHTAF 382 (635)
T ss_pred ceEEEEECC--CCccceEECCCCCEEEEeCCCC-------CcEEEEEChhhhhhhhccCCccceEEEeeccCCCcceEEE
Confidence 466667765 4567889999999888877754 49999999986531 1111111232345788
Q ss_pred cCCc-eeee--CCCeEEEEECCC
Q psy2083 82 HDNY-VLSM--DSSVVKIWSKDN 101 (248)
Q Consensus 82 ~~d~-l~Ss--dd~~IKIWD~~t 101 (248)
.+++ ..++ -|..|-.||+.+
T Consensus 383 Dg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 383 DGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred CCCCCEEEeEeecceeEEEehHH
Confidence 8887 3333 455666799876
No 334
>KOG1832|consensus
Probab=91.97 E-value=0.16 Score=52.68 Aligned_cols=122 Identities=9% Similarity=0.152 Sum_probs=80.9
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee-
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM- 89 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss- 89 (248)
..+|..+ ....++++|+-+...|+.|+ ..|.|++|.+-+|...-.. ..|+.+|+.|.-+.++ +.++
T Consensus 1094 w~~frd~-~~~fTc~afs~~~~hL~vG~--------~~Geik~~nv~sG~~e~s~-ncH~SavT~vePs~dgs~~Ltsss 1163 (1516)
T KOG1832|consen 1094 WRSFRDE-TALFTCIAFSGGTNHLAVGS--------HAGEIKIFNVSSGSMEESV-NCHQSAVTLVEPSVDGSTQLTSSS 1163 (1516)
T ss_pred chhhhcc-ccceeeEEeecCCceEEeee--------ccceEEEEEccCccccccc-cccccccccccccCCcceeeeecc
Confidence 3344443 34445555554444444433 3469999999999654443 2445999999999887 4443
Q ss_pred CCC-eEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccc
Q psy2083 90 DSS-VVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDN 157 (248)
Q Consensus 90 dd~-~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~ 157 (248)
.++ -.-+|+..+ |...+++.. -.++.|+.....=+.|++.....+|++.. |+-|+.
T Consensus 1164 ~S~PlsaLW~~~s~~~~~Hsf~e-----d~~vkFsn~~q~r~~gt~~d~a~~YDvqT-------~~~l~t 1221 (1516)
T KOG1832|consen 1164 SSSPLSALWDASSTGGPRHSFDE-----DKAVKFSNSLQFRALGTEADDALLYDVQT-------CSPLQT 1221 (1516)
T ss_pred ccCchHHHhccccccCccccccc-----cceeehhhhHHHHHhcccccceEEEeccc-------CcHHHH
Confidence 333 577999864 667777765 13457776665566777778899999987 888877
No 335
>KOG4640|consensus
Probab=91.93 E-value=0.84 Score=45.66 Aligned_cols=87 Identities=6% Similarity=0.126 Sum_probs=62.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec-CCCCCCee-EEEEcCCc--ee-eeCCCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-HMYGLPIR-DIKFHDNY--VL-SMDSSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~~~pI~-sI~F~~d~--l~-Ssdd~~IKIW 97 (248)
..+-.+.+.|.-.+++.+..++ .|.++=+...+ +++.. |+ .+++ +++|.||+ ++ +=.||+|+|-
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~g--------elli~R~n~qR-lwtip~p~--~~v~~sL~W~~DGkllaVg~kdG~I~L~ 89 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKG--------ELLIHRLNWQR-LWTIPIPG--ENVTASLCWRPDGKLLAVGFKDGTIRLH 89 (665)
T ss_pred cceEEEEEcCccchhheeccCC--------cEEEEEeccce-eEeccCCC--CccceeeeecCCCCEEEEEecCCeEEEE
Confidence 3567788888666666665554 78888777433 55544 54 7777 99999998 33 3368999999
Q ss_pred ECCCCCEEEE--eecCCCCCeeEEEEe
Q psy2083 98 SKDNGSLFTC--IESGDQTQFNNLCHI 122 (248)
Q Consensus 98 D~~tGk~~~t--ie~~h~~~In~l~~~ 122 (248)
|.++|..+.. +.. ..+|.++.|.
T Consensus 90 Dve~~~~l~~~~~s~--e~~is~~~w~ 114 (665)
T KOG4640|consen 90 DVEKGGRLVSFLFSV--ETDISKGIWD 114 (665)
T ss_pred EccCCCceecccccc--ccchheeecc
Confidence 9999998887 444 5677777775
No 336
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=91.88 E-value=6.9 Score=34.98 Aligned_cols=116 Identities=22% Similarity=0.274 Sum_probs=74.1
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC-CCeEEEEEC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD-SSVVKIWSK 99 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd-d~~IKIWD~ 99 (248)
..+..+.|.|+++.|+++.+.. +.|.-+|.. ++.+....-.--.-.-.|++..++ +++.+ ++.+-+.+.
T Consensus 22 ~e~SGLTy~pd~~tLfaV~d~~-------~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~ 93 (248)
T PF06977_consen 22 DELSGLTYNPDTGTLFAVQDEP-------GEIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTI 93 (248)
T ss_dssp S-EEEEEEETTTTEEEEEETTT-------TEEEEEETT---EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE
T ss_pred CCccccEEcCCCCeEEEEECCC-------CEEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEE
Confidence 5689999999999999988876 478888864 665554321111346788888776 66664 677777777
Q ss_pred CCC--C----EEEEeec----CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Q psy2083 100 DNG--S----LFTCIES----GDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLG 146 (248)
Q Consensus 100 ~tG--k----~~~tie~----~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG 146 (248)
... . .+..+.. .+...+-.+|+.|.++.|+++.|.....+|-++.+-
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~ 150 (248)
T PF06977_consen 94 DDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFP 150 (248)
T ss_dssp ----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT
T ss_pred eccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEcccc
Confidence 321 1 1233331 123457889999999999999999888888877643
No 337
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=91.87 E-value=8.1 Score=35.73 Aligned_cols=123 Identities=14% Similarity=0.150 Sum_probs=69.7
Q ss_pred cchhcCceeEEEe---cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec------CCCCCCe
Q psy2083 6 LRQDKGSLFTCIE---SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD------HMYGLPI 76 (248)
Q Consensus 6 ~~~~~G~~~~~~~---~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~------h~~~~pI 76 (248)
+|..+|+++.... ..|+-.+.-++..+++..++.....+ -..-.-.-|.+++-.. ++.... ..-...|
T Consensus 143 ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg-~~~~~~PLva~~~~g~--~~~~~~~p~~~~~~l~~Y~ 219 (305)
T PF07433_consen 143 LDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQG-DPGDAPPLVALHRRGG--ALRLLPAPEEQWRRLNGYI 219 (305)
T ss_pred EecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCC-CCCccCCeEEEEcCCC--cceeccCChHHHHhhCCce
Confidence 5677888777732 33356778888877654444432221 1111223444444433 222111 1222568
Q ss_pred eEEEEcCCc---eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCe
Q psy2083 77 RDIKFHDNY---VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKK 136 (248)
Q Consensus 77 ~sI~F~~d~---l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~ 136 (248)
=+|+|++++ .+|| -.+.+-+||..+|+.+....- .++-.++-.+++ ++++.+ .+.
T Consensus 220 gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l---~D~cGva~~~~~-f~~ssG-~G~ 278 (305)
T PF07433_consen 220 GSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPL---PDACGVAPTDDG-FLVSSG-QGQ 278 (305)
T ss_pred EEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeecccc---CceeeeeecCCc-eEEeCC-Ccc
Confidence 999999987 3455 467999999999998866543 445555555555 444444 444
No 338
>KOG1008|consensus
Probab=91.77 E-value=0.06 Score=53.79 Aligned_cols=108 Identities=19% Similarity=0.348 Sum_probs=68.4
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC----ceeEEecCCCCCCeeEEEEc---CCceeeeCCCeEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD----KPLRVKDHMYGLPIRDIKFH---DNYVLSMDSSVVK 95 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~----~pl~~~~h~~~~pI~sI~F~---~d~l~Ssdd~~IK 95 (248)
...+++|+-.+..++.+|.... .|.++|+|-+ ..+.++.| ..+... ++.+++..|+.|-
T Consensus 155 ~gqns~cwlrd~klvlaGm~sr--------~~~ifdlRqs~~~~~svnTk~v------qG~tVdp~~~nY~cs~~dg~iA 220 (783)
T KOG1008|consen 155 DGQNSVCWLRDTKLVLAGMTSR--------SVHIFDLRQSLDSVSSVNTKYV------QGITVDPFSPNYFCSNSDGDIA 220 (783)
T ss_pred cCccccccccCcchhhcccccc--------hhhhhhhhhhhhhhhhhhhhhc------ccceecCCCCCceeccccCcee
Confidence 3456888886555444544443 7999999954 22334333 344444 4448888899999
Q ss_pred EEE-CCCC-CEEEEeecCCCC----CeeEEEEeCCC-CEEEEEeCC-CeEEEEEcCCC
Q psy2083 96 IWS-KDNG-SLFTCIESGDQT----QFNNLCHIPES-GMMFIANEN-KKILTYYIPSL 145 (248)
Q Consensus 96 IWD-~~tG-k~~~tie~~h~~----~In~l~~~pds-gll~sa~ed-~~I~~w~Ip~l 145 (248)
||| ..+- +++..+..+ +. .+..+++.|-. |++++.+.| ++|..|+|..-
T Consensus 221 iwD~~rnienpl~~i~~~-~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~v 277 (783)
T KOG1008|consen 221 IWDTYRNIENPLQIILRN-ENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICVV 277 (783)
T ss_pred eccchhhhccHHHHHhhC-CCCcccceeeEEeccCCcchhhhhccCcceEEEeccccc
Confidence 999 4432 344444321 23 37788999954 777777765 78999987543
No 339
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=91.74 E-value=2.2 Score=39.81 Aligned_cols=88 Identities=8% Similarity=0.035 Sum_probs=55.2
Q ss_pred CeeEEEEcCCCceeEEecCCCCC---------Ce-eEEEEcCCc-eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEE
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGL---------PI-RDIKFHDNY-VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLC 120 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~---------pI-~sI~F~~d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~ 120 (248)
|.|.-+|..+++.++........ .+ -.+....+. ++++.++.+.-+|.++|+.+-+.+. ..++.+--
T Consensus 79 g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~--~~~~~ssP 156 (394)
T PRK11138 79 GLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKGQVYALNAEDGEVAWQTKV--AGEALSRP 156 (394)
T ss_pred CeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCCEEEEEECCCCCCcccccC--CCceecCC
Confidence 58999999999998876433110 01 112333334 5556788999999999998877765 33333211
Q ss_pred EeCCCCEEEEEeCCCeEEEEEc
Q psy2083 121 HIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 121 ~~pdsgll~sa~ed~~I~~w~I 142 (248)
.. .++.++++..++.+..++.
T Consensus 157 ~v-~~~~v~v~~~~g~l~ald~ 177 (394)
T PRK11138 157 VV-SDGLVLVHTSNGMLQALNE 177 (394)
T ss_pred EE-ECCEEEEECCCCEEEEEEc
Confidence 11 2456667777777776664
No 340
>KOG4190|consensus
Probab=91.56 E-value=0.62 Score=46.24 Aligned_cols=121 Identities=12% Similarity=0.099 Sum_probs=81.3
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE----ecCCCCCCeeEEEEcCCc--
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV----KDHMYGLPIRDIKFHDNY-- 85 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~----~~h~~~~pI~sI~F~~d~-- 85 (248)
+++++ ..| ...|+++.|..+...+++ .|+ -|.|||-=-++|+.. .-|+.+..|+++.=-...
T Consensus 776 CQfTY-~aH-kk~i~~igfL~~lr~i~S--cD~--------giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~il 843 (1034)
T KOG4190|consen 776 CQFTY-QAH-KKPIHDIGFLADLRSIAS--CDG--------GIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHIL 843 (1034)
T ss_pred eeeEh-hhc-cCcccceeeeeccceeee--ccC--------cceeecccccchhHhhhcCcccCCCceeEecccCcchhe
Confidence 44444 444 688999999876554433 343 599999877777653 234544556665432222
Q ss_pred eee-eCCCeEEEEECCCCCEEEEeec----CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 VLS-MDSSVVKIWSKDNGSLFTCIES----GDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 l~S-sdd~~IKIWD~~tGk~~~tie~----~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++. +...+||++|.+.++-...+.. +-.+-++++++.|.|+.+++|-..|.|-+-+...
T Consensus 844 iAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~ 907 (1034)
T KOG4190|consen 844 IAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARN 907 (1034)
T ss_pred eeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCC
Confidence 333 4578999999999876555542 1125678999999999999998888888877554
No 341
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=91.48 E-value=5.7 Score=36.59 Aligned_cols=110 Identities=16% Similarity=0.216 Sum_probs=64.2
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce-eE--EecCCC-CCCeeEEEEcCCc--eee-eC-----
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP-LR--VKDHMY-GLPIRDIKFHDNY--VLS-MD----- 90 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p-l~--~~~h~~-~~pI~sI~F~~d~--l~S-sd----- 90 (248)
+.+.+..-...+|.|+++ .. -+.++|..++.. .. ....+. ...-|.+...|++ .++ ..
T Consensus 66 ~~~~~~~~~d~~g~Lv~~-~~---------g~~~~~~~~~~~~t~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~ 135 (307)
T COG3386 66 GGFSSGALIDAGGRLIAC-EH---------GVRLLDPDTGGKITLLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLG 135 (307)
T ss_pred CCcccceeecCCCeEEEE-cc---------ccEEEeccCCceeEEeccccCCCCcCCCCceeEcCCCCEEEeCCCccccC
Confidence 355666666667766554 33 268888866543 22 222221 1345678888887 222 12
Q ss_pred ----CCeEEEEECC-CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcC
Q psy2083 91 ----SSVVKIWSKD-NGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIP 143 (248)
Q Consensus 91 ----d~~IKIWD~~-tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip 143 (248)
..+=.+|=.. .|....-+.. +-.--|.+||+||+..|..+-. .+.|+-|...
T Consensus 136 ~~~~~~~G~lyr~~p~g~~~~l~~~-~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d 193 (307)
T COG3386 136 KSEERPTGSLYRVDPDGGVVRLLDD-DLTIPNGLAFSPDGKTLYVADTPANRIHRYDLD 193 (307)
T ss_pred ccccCCcceEEEEcCCCCEEEeecC-cEEecCceEECCCCCEEEEEeCCCCeEEEEecC
Confidence 1122344444 4555555554 3566789999999977777754 4888888765
No 342
>KOG2114|consensus
Probab=91.16 E-value=4.2 Score=42.24 Aligned_cols=97 Identities=13% Similarity=0.192 Sum_probs=65.2
Q ss_pred eecCCeeEEEE---cCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEECCCCCE--EEEeecCCCCCeeEE
Q psy2083 48 TYYIPAFYLYD---IRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWSKDNGSL--FTCIESGDQTQFNNL 119 (248)
Q Consensus 48 ~~~~G~V~LwD---lRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~--~~tie~~h~~~In~l 119 (248)
|+.+|.|..|- +|....-....|.-+.||+.+.|..++ +..+.-..|+++... |+. +..+.. |..++||.
T Consensus 143 Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~-gr~p~~~~ld~-~G~~lnCs 220 (933)
T KOG2114|consen 143 GFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLS-GRTPSLKVLDN-NGISLNCS 220 (933)
T ss_pred EecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEec-CCCcceeeecc-CCccceee
Confidence 33346888874 333222223456656899999999886 455667788999988 554 444555 57899999
Q ss_pred EEeCCCCEEEEEeCCCeEEEEEcCCCCC
Q psy2083 120 CHIPESGMMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 120 ~~~pdsgll~sa~ed~~I~~w~Ip~lG~ 147 (248)
.+++.++.+++|+ +.-+..|+.+.-||
T Consensus 221 s~~~~t~qfIca~-~e~l~fY~sd~~~~ 247 (933)
T KOG2114|consen 221 SFSDGTYQFICAG-SEFLYFYDSDGRGP 247 (933)
T ss_pred ecCCCCccEEEec-CceEEEEcCCCcce
Confidence 9999888565555 55677777774443
No 343
>KOG4640|consensus
Probab=91.08 E-value=1.2 Score=44.62 Aligned_cols=69 Identities=12% Similarity=0.214 Sum_probs=49.3
Q ss_pred CCeeEEEEcCCc--eee-eCCCeEEEEECCCCCEEEEee-cCCCCCee-EEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 74 LPIRDIKFHDNY--VLS-MDSSVVKIWSKDNGSLFTCIE-SGDQTQFN-NLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 74 ~pI~sI~F~~d~--l~S-sdd~~IKIWD~~tGk~~~tie-~~h~~~In-~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
..|.-+.|+|.. ++. ..++-|-|.-.+ .+-+.++. + .-+++ ++||.|||++|++|-.||+|.+-|+..=
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p--~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~ 94 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIP--GENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKG 94 (665)
T ss_pred cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCC--CCccceeeeecCCCCEEEEEecCCeEEEEEccCC
Confidence 457888999986 332 345545455444 44455665 4 44555 9999999999999999999999997553
No 344
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=90.92 E-value=6.2 Score=36.35 Aligned_cols=104 Identities=18% Similarity=0.257 Sum_probs=63.0
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC--C---ce--eEEecCCCCCCeeEEEEcCCc-ee-eeC-CC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA--D---KP--LRVKDHMYGLPIRDIKFHDNY-VL-SMD-SS 92 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs--~---~p--l~~~~h~~~~pI~sI~F~~d~-l~-Ssd-d~ 92 (248)
..-|.+||+||+..++.+-+.. +.|.-||+-. + .+ ....+...+.|- .++...++ +- ++- .+
T Consensus 163 ~~~NGla~SpDg~tly~aDT~~-------~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PD-G~~vDadG~lw~~a~~~g 234 (307)
T COG3386 163 TIPNGLAFSPDGKTLYVADTPA-------NRIHRYDLDPATGPIGGRRGFVDFDEEPGLPD-GMAVDADGNLWVAAVWGG 234 (307)
T ss_pred EecCceEECCCCCEEEEEeCCC-------CeEEEEecCcccCccCCcceEEEccCCCCCCC-ceEEeCCCCEEEecccCC
Confidence 4558999999987777775553 2677776642 1 11 111222222221 22333334 33 333 33
Q ss_pred -eEEEEECCCCCEEEEeecCCC-CCeeEEEEe-CCCCEEEEEeCCCeE
Q psy2083 93 -VVKIWSKDNGSLFTCIESGDQ-TQFNNLCHI-PESGMMFIANENKKI 137 (248)
Q Consensus 93 -~IKIWD~~tGk~~~tie~~h~-~~In~l~~~-pdsgll~sa~ed~~I 137 (248)
.|.+|+++ |+.+..++. + ..+.++||. |+.+.|++.+....+
T Consensus 235 ~~v~~~~pd-G~l~~~i~l--P~~~~t~~~FgG~~~~~L~iTs~~~~~ 279 (307)
T COG3386 235 GRVVRFNPD-GKLLGEIKL--PVKRPTNPAFGGPDLNTLYITSARSGM 279 (307)
T ss_pred ceEEEECCC-CcEEEEEEC--CCCCCccceEeCCCcCEEEEEecCCCC
Confidence 89999999 999999997 4 778888995 556667766655533
No 345
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=90.92 E-value=6.4 Score=37.56 Aligned_cols=52 Identities=17% Similarity=0.259 Sum_probs=30.9
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe---c----CCCCCCeeEEEEc
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK---D----HMYGLPIRDIKFH 82 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~---~----h~~~~pI~sI~F~ 82 (248)
++.|..++.+ +=|.+++|..+ |.+.|.|+|.+.-+... + +.....|++++|.
T Consensus 86 ~g~vtal~~S-~iGFvaigy~~--------G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~ 144 (395)
T PF08596_consen 86 QGPVTALKNS-DIGFVAIGYES--------GSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFS 144 (395)
T ss_dssp S-SEEEEEE--BTSEEEEEETT--------SEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEE
T ss_pred CCcEeEEecC-CCcEEEEEecC--------CcEEEEECCCCeEEeeccccccccccccccCeeEEEEE
Confidence 5677777665 46666555544 59999999988655431 2 1223468888886
No 346
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=90.82 E-value=0.7 Score=30.35 Aligned_cols=32 Identities=19% Similarity=0.244 Sum_probs=23.6
Q ss_pred CeeEEEEeCCCC--cEEEeecCceeeeecCCeeEEEEcCCC
Q psy2083 24 QFNNLCHIPESG--MMFIANENKKILTYYIPAFYLYDIRAD 62 (248)
Q Consensus 24 ~V~~~~~~~~~g--~l~~ag~d~~~~~~~~G~V~LwDlRs~ 62 (248)
.|.++.|+|+++ -|++-+++. |.|-|+|+|+.
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~-------g~vhi~D~R~~ 35 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQ-------GRVHIVDTRSN 35 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccC-------CeEEEEEcccC
Confidence 577888998776 355555654 59999999963
No 347
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=90.48 E-value=1.2 Score=43.71 Aligned_cols=105 Identities=10% Similarity=0.065 Sum_probs=67.3
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee-eC---------
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS-MD--------- 90 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S-sd--------- 90 (248)
=.++.++++|-|.++++.-.. -|.+|+--+..-+...-| ..|+.+.|+|.+ |++ +.
T Consensus 33 ~p~~~~~~SP~G~~l~~~~~~---------~V~~~~g~~~~~l~~~~~---~~V~~~~fSP~~kYL~tw~~~pi~~pe~e 100 (561)
T COG5354 33 WPVAYVSESPLGTYLFSEHAA---------GVECWGGPSKAKLVRFRH---PDVKYLDFSPNEKYLVTWSREPIIEPEIE 100 (561)
T ss_pred cchhheeecCcchheehhhcc---------ceEEccccchhheeeeec---CCceecccCcccceeeeeccCCccChhhc
Confidence 467889999977666665444 489999887654555545 468999999986 332 22
Q ss_pred ------CCeEEEEECCCCCEEEEeecCCCCC--ee-EEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 91 ------SSVVKIWSKDNGSLFTCIESGDQTQ--FN-NLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 91 ------d~~IKIWD~~tGk~~~tie~~h~~~--In-~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
++.+.+||..+|..+.++..- ..+ .. -+.|+-|..+++=- -...+++|.
T Consensus 101 ~sp~~~~n~~~vwd~~sg~iv~sf~~~-~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e 158 (561)
T COG5354 101 ISPFTSKNNVFVWDIASGMIVFSFNGI-SQPYLGWPVLKFSIDDKYVARV-VGSSLYIHE 158 (561)
T ss_pred cCCccccCceeEEeccCceeEeecccc-CCcccccceeeeeecchhhhhh-ccCeEEEEe
Confidence 235899999999999988751 222 22 34555555443322 233444554
No 348
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=90.36 E-value=5.7 Score=40.23 Aligned_cols=108 Identities=10% Similarity=0.154 Sum_probs=64.4
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEc--CCc--eee-eCCCeEEEEE
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFH--DNY--VLS-MDSSVVKIWS 98 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~--~d~--l~S-sdd~~IKIWD 98 (248)
+..-+..++ -+.++.+.+++ .++.|||.+++..-.........+|.++.|. |++ +++ +-.+.|.++-
T Consensus 31 ~~~li~gss-~~k~a~V~~~~-------~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~ 102 (631)
T PF12234_consen 31 NPSLISGSS-IKKIAVVDSSR-------SELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYT 102 (631)
T ss_pred CcceEeecc-cCcEEEEECCC-------CEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEE
Confidence 333444444 34455555544 3899999999863322222225799999986 444 444 6677777875
Q ss_pred CC-----C----CCEEEEee--cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 99 KD-----N----GSLFTCIE--SGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 99 ~~-----t----Gk~~~tie--~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
-- + -.++..+. ...+.+|.+.+|-+||.+++.+ ++++.+|+
T Consensus 103 Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~d 154 (631)
T PF12234_consen 103 QLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFD 154 (631)
T ss_pred ccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEEC
Confidence 42 1 12333332 2224789999999998766555 45666664
No 349
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=90.12 E-value=8.6 Score=40.74 Aligned_cols=110 Identities=9% Similarity=0.117 Sum_probs=67.6
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc---eeEEec----CCCCCCeeEEEEcCCc---eeeeCCC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK---PLRVKD----HMYGLPIRDIKFHDNY---VLSMDSS 92 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~---pl~~~~----h~~~~pI~sI~F~~d~---l~Ssdd~ 92 (248)
..+...+|.+.+..++.+.+... ..+.|.+.-.+... .+...+ -.....|.++.|.++. ++...+|
T Consensus 22 ~~~~~~~~d~~sd~i~~~~~~~~----~~~~i~~~~~~~~~~~~~l~s~~~~~~~~~~~~ivs~~yl~d~~~l~~~~~~G 97 (928)
T PF04762_consen 22 LPITATAFDSDSDSIYFVLGPNE----IDYVIELDRFSQDGSVEVLASWDAPLPDDPNDKIVSFQYLADSESLCIALASG 97 (928)
T ss_pred cccceEEEecCCCeEEEEECCCC----cceEEEEEeeccCCceeEEEeccccCCcCCCCcEEEEEeccCCCcEEEEECCc
Confidence 35777888776666544433321 12345555444433 222222 1223679999999886 3344566
Q ss_pred eEEEE----ECCCC--CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 93 VVKIW----SKDNG--SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 93 ~IKIW----D~~tG--k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
-|-+. |..+. +.+.+++ ..|.+++|+||+.+|+.+..++++.+-
T Consensus 98 di~~~~~~~~~~~~~~E~VG~vd----~GI~a~~WSPD~Ella~vT~~~~l~~m 147 (928)
T PF04762_consen 98 DIILVREDPDPDEDEIEIVGSVD----SGILAASWSPDEELLALVTGEGNLLLM 147 (928)
T ss_pred eEEEEEccCCCCCceeEEEEEEc----CcEEEEEECCCcCEEEEEeCCCEEEEE
Confidence 55555 44433 3444554 469999999999999999999988776
No 350
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=89.88 E-value=2.4 Score=42.90 Aligned_cols=68 Identities=18% Similarity=0.317 Sum_probs=49.3
Q ss_pred eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEE--eCCCCEEEEEeCCCeEEEEEc---CCCCCCCCccc
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCH--IPESGMMFIANENKKILTYYI---PSLGPAPKWCG 153 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~--~pdsgll~sa~ed~~I~~w~I---p~lG~aP~wcs 153 (248)
++.++...+.|||.+.|.....-.-....+|.++.| .|||..+++.+=+.+|.+|-= -.+...|.|..
T Consensus 45 ~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~ 117 (631)
T PF12234_consen 45 VVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAP 117 (631)
T ss_pred EEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccce
Confidence 666778899999999886443322112578998877 589999999999999999842 22356777874
No 351
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=89.32 E-value=14 Score=34.82 Aligned_cols=135 Identities=12% Similarity=0.124 Sum_probs=84.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecC-cee-eeecCCeeEEEEcCCCceeEEecCC------CCCCee
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN-KKI-LTYYIPAFYLYDIRADKPLRVKDHM------YGLPIR 77 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d-~~~-~~~~~G~V~LwDlRs~~pl~~~~h~------~~~pI~ 77 (248)
+|+++|+.+-.+..+ ..-.+..+|++..+++++.- .++ -|-.+-.|.+||..+=.|.....-. ....-+
T Consensus 22 iD~d~~k~lGmi~~g---~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~ 98 (342)
T PF06433_consen 22 IDADSGKLLGMIDTG---FLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKN 98 (342)
T ss_dssp EETTTTEEEEEEEEE---SSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GG
T ss_pred EECCCCcEEEEeecc---cCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheeccccc
Confidence 578889988888876 34456678888877765431 222 4445558999999998776532211 012234
Q ss_pred EEEEcCCc---eee--eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 78 DIKFHDNY---VLS--MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 78 sI~F~~d~---l~S--sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~a 148 (248)
...++.|+ ++. +-..+|-|-|+..++.+..+.. +. |.-.+|-+ .-+.+.|.||++....+-+-|..
T Consensus 99 ~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~--PG---C~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~ 170 (342)
T PF06433_consen 99 MFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDT--PG---CWLIYPSGNRGFSMLCGDGSLLTVTLDADGKE 170 (342)
T ss_dssp GEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEG--TS---EEEEEEEETTEEEEEETTSCEEEEEETSTSSE
T ss_pred ceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecC--CC---EEEEEecCCCceEEEecCCceEEEEECCCCCE
Confidence 56677765 222 2366788889999998888874 32 33334422 34778888998888877655543
No 352
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=89.30 E-value=11 Score=35.31 Aligned_cols=105 Identities=10% Similarity=0.189 Sum_probs=73.8
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eeee--CCCeEEEEEC
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLSM--DSSVVKIWSK 99 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~Ss--dd~~IKIWD~ 99 (248)
..+..++.+..++....+. ..|.+.|+.+.+-+....-+ .--..+.|++++ ++-+ .+++|-+-|.
T Consensus 77 ~~i~v~~~~~~vyv~~~~~-------~~v~vid~~~~~~~~~~~vG--~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~ 147 (381)
T COG3391 77 AGVAVNPAGNKVYVTTGDS-------NTVSVIDTATNTVLGSIPVG--LGPVGLAVDPDGKYVYVANAGNGNNTVSVIDA 147 (381)
T ss_pred cceeeCCCCCeEEEecCCC-------CeEEEEcCcccceeeEeeec--cCCceEEECCCCCEEEEEecccCCceEEEEeC
Confidence 4566677666566555442 38999998777655543323 234678899886 4434 3689999999
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEE
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYY 141 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~ 141 (248)
.+++...++..+ ..+ ..+++.|+|..+.++. .++.|.+.+
T Consensus 148 ~t~~~~~~~~vG-~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~ 188 (381)
T COG3391 148 ATNKVTATIPVG-NTP-TGVAVDPDGNKVYVTNSDDNTVSVID 188 (381)
T ss_pred CCCeEEEEEecC-CCc-ceEEECCCCCeEEEEecCCCeEEEEe
Confidence 999999886542 345 7899999999777777 567787777
No 353
>KOG2079|consensus
Probab=89.25 E-value=0.94 Score=47.90 Aligned_cols=68 Identities=21% Similarity=0.367 Sum_probs=47.1
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcC----Cc-eeeeCCCeEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHD----NY-VLSMDSSVVKI 96 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~----d~-l~Ssdd~~IKI 96 (248)
++.|.+++|+. +|.+.++|-.+ |.|.+||+..++++...+ .++.|...|-|+. +. ++++|.+-. +
T Consensus 130 ~~~Vtsvafn~-dg~~l~~G~~~-------G~V~v~D~~~~k~l~~i~-e~~ap~t~vi~v~~t~~nS~llt~D~~Gs-f 199 (1206)
T KOG2079|consen 130 QGPVTSVAFNQ-DGSLLLAGLGD-------GHVTVWDMHRAKILKVIT-EHGAPVTGVIFVGRTSQNSKLLTSDTGGS-F 199 (1206)
T ss_pred CCcceeeEecC-CCceeccccCC-------CcEEEEEccCCcceeeee-ecCCccceEEEEEEeCCCcEEEEccCCCc-e
Confidence 56788887776 55666666654 599999999999888753 2247877777653 33 778876543 6
Q ss_pred EEC
Q psy2083 97 WSK 99 (248)
Q Consensus 97 WD~ 99 (248)
|..
T Consensus 200 ~~l 202 (1206)
T KOG2079|consen 200 WKL 202 (1206)
T ss_pred EEE
Confidence 764
No 354
>KOG4649|consensus
Probab=89.10 E-value=8.5 Score=35.25 Aligned_cols=106 Identities=9% Similarity=0.044 Sum_probs=70.8
Q ss_pred EEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEE-EcCCc-eeeeCCCeEEEEECCCCCEE
Q psy2083 28 LCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIK-FHDNY-VLSMDSSVVKIWSKDNGSLF 105 (248)
Q Consensus 28 ~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~-F~~d~-l~Ssdd~~IKIWD~~tGk~~ 105 (248)
++.-+++..++..|+.. |.+.--|..+|+.++...-+ ..|-+-+ .-.|. |+++-++.+-+-+.+||...
T Consensus 16 LVV~~dskT~v~igSHs-------~~~~avd~~sG~~~We~ilg--~RiE~sa~vvgdfVV~GCy~g~lYfl~~~tGs~~ 86 (354)
T KOG4649|consen 16 LVVCNDSKTLVVIGSHS-------GIVIAVDPQSGNLIWEAILG--VRIECSAIVVGDFVVLGCYSGGLYFLCVKTGSQI 86 (354)
T ss_pred EEEecCCceEEEEecCC-------ceEEEecCCCCcEEeehhhC--ceeeeeeEEECCEEEEEEccCcEEEEEecchhhe
Confidence 34445555544444443 47888899999887764333 3333222 13344 78889999999999999777
Q ss_pred EEeecCCCCCee-EEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 106 TCIESGDQTQFN-NLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 106 ~tie~~h~~~In-~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
..+.. ...|. .....+++|+|..++.|++.+.-|+..
T Consensus 87 w~f~~--~~~vk~~a~~d~~~glIycgshd~~~yalD~~~ 124 (354)
T KOG4649|consen 87 WNFVI--LETVKVRAQCDFDGGLIYCGSHDGNFYALDPKT 124 (354)
T ss_pred eeeee--hhhhccceEEcCCCceEEEecCCCcEEEecccc
Confidence 66665 33333 245578999999999999998777543
No 355
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=88.76 E-value=1.2 Score=29.18 Aligned_cols=30 Identities=17% Similarity=0.172 Sum_probs=25.0
Q ss_pred CeeEEEEeCCCC---EEEEEeCCCeEEEEEcCC
Q psy2083 115 QFNNLCHIPESG---MMFIANENKKILTYYIPS 144 (248)
Q Consensus 115 ~In~l~~~pdsg---ll~sa~ed~~I~~w~Ip~ 144 (248)
.|+++.|+|+++ +|+.+-..+.|+++|+.+
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 588999999777 777777779999999864
No 356
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=88.74 E-value=5 Score=35.11 Aligned_cols=85 Identities=18% Similarity=0.287 Sum_probs=51.9
Q ss_pred eEEEEcC-CCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCCCCEEE---------------EeecCCCCC
Q psy2083 54 FYLYDIR-ADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFT---------------CIESGDQTQ 115 (248)
Q Consensus 54 V~LwDlR-s~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~tGk~~~---------------tie~~h~~~ 115 (248)
+.+|++. ..++..... . .+|..+...++. ++.-.|+.+.++|..+-.... .+.. ...
T Consensus 18 l~~~~~~~~~~~~~i~~-~--~~I~ql~vl~~~~~llvLsd~~l~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~ 92 (275)
T PF00780_consen 18 LYVYDLSDPSKPTRILK-L--SSITQLSVLPELNLLLVLSDGQLYVYDLDSLEPVSTSAPLAFPKSRSLPTKLPE--TKG 92 (275)
T ss_pred EEEEEecCCccceeEee-c--ceEEEEEEecccCEEEEEcCCccEEEEchhhccccccccccccccccccccccc--cCC
Confidence 8999993 334444432 2 459999999875 444345999999987643333 2222 345
Q ss_pred eeEEE--EeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 116 FNNLC--HIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 116 In~l~--~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++.++ -.+++...++..-.++|.+|...
T Consensus 93 v~~f~~~~~~~~~~~L~va~kk~i~i~~~~ 122 (275)
T PF00780_consen 93 VSFFAVNGGHEGSRRLCVAVKKKILIYEWN 122 (275)
T ss_pred eeEEeeccccccceEEEEEECCEEEEEEEE
Confidence 66555 23455555555556688888643
No 357
>KOG2114|consensus
Probab=88.22 E-value=10 Score=39.51 Aligned_cols=79 Identities=15% Similarity=0.259 Sum_probs=61.6
Q ss_pred CCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEE
Q psy2083 22 QTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWS 98 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD 98 (248)
...|+++.+..++.. +|++... .|.+|-+....|....-..+|.++++..|++.. ++++.+.-+-++|
T Consensus 171 ~~pITgL~~~~d~~s~lFv~Tt~---------~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~e~l~fY~ 241 (933)
T KOG2114|consen 171 KEPITGLALRSDGKSVLFVATTE---------QVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAGSEFLYFYD 241 (933)
T ss_pred CCCceeeEEecCCceeEEEEecc---------eeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEecCceEEEEc
Confidence 578999999887766 6777766 699999985556555433567999999999876 7888888899999
Q ss_pred CCCCCEEEEee
Q psy2083 99 KDNGSLFTCIE 109 (248)
Q Consensus 99 ~~tGk~~~tie 109 (248)
...-++--+++
T Consensus 242 sd~~~~cfaf~ 252 (933)
T KOG2114|consen 242 SDGRGPCFAFE 252 (933)
T ss_pred CCCcceeeeec
Confidence 98655555666
No 358
>KOG1275|consensus
Probab=87.99 E-value=2.5 Score=44.16 Aligned_cols=93 Identities=11% Similarity=0.137 Sum_probs=58.2
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
++|-+++++.+...-+ .+.|.=.+ .. +..+++|... |+|-|=|.++-+++.+.+ .|...|.+...+.+
T Consensus 161 ~~Dl~~~~e~r~~~v~-a~~v~imR-~N-nr~lf~G~t~--------G~V~LrD~~s~~~iht~~-aHs~siSDfDv~GN 228 (1118)
T KOG1275|consen 161 HIDLNTEKETRTTNVS-ASGVTIMR-YN-NRNLFCGDTR--------GTVFLRDPNSFETIHTFD-AHSGSISDFDVQGN 228 (1118)
T ss_pred eeecccceeeeeeecc-CCceEEEE-ec-CcEEEeeccc--------ceEEeecCCcCceeeeee-ccccceeeeeccCC
Confidence 3566666666665433 22343333 22 3445554444 599999999999998864 23377887777776
Q ss_pred ceeee----------CCCeEEEEECCCCCEEEEee
Q psy2083 85 YVLSM----------DSSVVKIWSKDNGSLFTCIE 109 (248)
Q Consensus 85 ~l~Ss----------dd~~IKIWD~~tGk~~~tie 109 (248)
.++++ -|.=||+||+++-+.+.-+.
T Consensus 229 lLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~ 263 (1118)
T KOG1275|consen 229 LLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQ 263 (1118)
T ss_pred eEEEeecccccccccccchhhhhhhhhhhccCCcc
Confidence 64432 26679999999766554443
No 359
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=87.79 E-value=9.6 Score=38.33 Aligned_cols=107 Identities=13% Similarity=0.198 Sum_probs=70.8
Q ss_pred CeeEEEEeCCC----CcEEEeecCceeeeecCCeeEEEEcCC-----CceeEEe--cCCCCCCee--EEEEcCCc----e
Q psy2083 24 QFNNLCHIPES----GMMFIANENKKILTYYIPAFYLYDIRA-----DKPLRVK--DHMYGLPIR--DIKFHDNY----V 86 (248)
Q Consensus 24 ~V~~~~~~~~~----g~l~~ag~d~~~~~~~~G~V~LwDlRs-----~~pl~~~--~h~~~~pI~--sI~F~~d~----l 86 (248)
.|..+.|.|.+ --++++.-.. +|-+|-+-- ++.+... +.+-..||. .+.|||.. |
T Consensus 58 hV~GlsW~P~~~~~~paLLAVQHkk--------hVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~V 129 (671)
T PF15390_consen 58 HVHGLSWAPPCTADTPALLAVQHKK--------HVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTV 129 (671)
T ss_pred eeeeeeecCcccCCCCceEEEeccc--------eEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEE
Confidence 57788888752 2355665554 899999873 2555443 333335554 57899987 5
Q ss_pred eeeCCCeEEEEECC--CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC-CeEEEEE
Q psy2083 87 LSMDSSVVKIWSKD--NGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN-KKILTYY 141 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~--tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed-~~I~~w~ 141 (248)
+++.|-.| +.+.+ +......+.+ ..-|.|.||.+||..|++|-.. =.-++|+
T Consensus 130 LT~~dvSV-~~sV~~d~srVkaDi~~--~G~IhCACWT~DG~RLVVAvGSsLHSyiWd 184 (671)
T PF15390_consen 130 LTARDVSV-LPSVHCDSSRVKADIKT--SGLIHCACWTKDGQRLVVAVGSSLHSYIWD 184 (671)
T ss_pred EecCceeE-eeeeeeCCceEEEeccC--CceEEEEEecCcCCEEEEEeCCeEEEEEec
Confidence 66666555 45544 3455666766 7899999999999888877644 3556776
No 360
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=87.75 E-value=24 Score=33.08 Aligned_cols=127 Identities=14% Similarity=0.204 Sum_probs=85.5
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|..+-+...++.-+ .....+++.|+++.+..+.... .+++|.+-|-.+.+.+....-+ ..| ..+.+.|++
T Consensus 101 id~~~~~~~~~~~vG--~~P~~~~~~~~~~~vYV~n~~~-----~~~~vsvid~~t~~~~~~~~vG-~~P-~~~a~~p~g 171 (381)
T COG3391 101 IDTATNTVLGSIPVG--LGPVGLAVDPDGKYVYVANAGN-----GNNTVSVIDAATNKVTATIPVG-NTP-TGVAVDPDG 171 (381)
T ss_pred EcCcccceeeEeeec--cCCceEEECCCCCEEEEEeccc-----CCceEEEEeCCCCeEEEEEecC-CCc-ceEEECCCC
Confidence 444555666666655 2556888999888888776631 1248999999888877763222 146 899999997
Q ss_pred ----eeeeCCCeEEEEECCCCCEEE-E----eecCCCCCeeEEEEeCCCCEEEEEeCCC---eEEEEEcC
Q psy2083 86 ----VLSMDSSVVKIWSKDNGSLFT-C----IESGDQTQFNNLCHIPESGMMFIANENK---KILTYYIP 143 (248)
Q Consensus 86 ----l~Ssdd~~IKIWD~~tGk~~~-t----ie~~h~~~In~l~~~pdsgll~sa~ed~---~I~~w~Ip 143 (248)
+..++++.|.+.|..+..... + +.. ......+.+.|+|..+.++.+.. ++...+..
T Consensus 172 ~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~--~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~ 239 (381)
T COG3391 172 NKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGV--GTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTA 239 (381)
T ss_pred CeEEEEecCCCeEEEEeCCCcceecccccccccc--CCCCceEEECCCCCEEEEEeccCCCceEEEEeCC
Confidence 333468999999977655542 1 222 23345678999999888887765 66666543
No 361
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=87.69 E-value=3.3 Score=41.02 Aligned_cols=105 Identities=24% Similarity=0.420 Sum_probs=63.7
Q ss_pred CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----------eee-eCCCeEEEEECC-
Q psy2083 33 ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----------VLS-MDSSVVKIWSKD- 100 (248)
Q Consensus 33 ~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----------l~S-sdd~~IKIWD~~- 100 (248)
++.+++.-|+.. ..+.--||.-|+-+-..+.. ..| =|.|.|+. +++ |+.++.|| |++
T Consensus 478 dssli~~dg~~~-------~kLykmDIErGkvveeW~~~--ddv-vVqy~p~~kf~qmt~eqtlvGlS~~svFrI-DPR~ 546 (776)
T COG5167 478 DSSLIYLDGGER-------DKLYKMDIERGKVVEEWDLK--DDV-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRI-DPRA 546 (776)
T ss_pred CcceEEecCCCc-------ccceeeecccceeeeEeecC--Ccc-eeecCCchhHHhcCccceEEeecccceEEe-cccc
Confidence 455555444442 14555677777766655433 233 67787752 666 45556665 554
Q ss_pred CCCEEEEeecCC---CCCeeEEEEeCCCCEEEEEeCCCeEEEEE---------cCCCCCCC
Q psy2083 101 NGSLFTCIESGD---QTQFNNLCHIPESGMMFIANENKKILTYY---------IPSLGPAP 149 (248)
Q Consensus 101 tGk~~~tie~~h---~~~In~l~~~pdsgll~sa~ed~~I~~w~---------Ip~lG~aP 149 (248)
.|.-+...+..+ ....+| .....+|+|++|++.|.|++|+ +|.||.|=
T Consensus 547 ~gNKi~v~esKdY~tKn~Fss-~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aI 606 (776)
T COG5167 547 RGNKIKVVESKDYKTKNKFSS-GMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAI 606 (776)
T ss_pred cCCceeeeeehhccccccccc-cccccCceEEEecCCCceeeehhhcchhhhcCcccccce
Confidence 454444444310 122322 2235789999999999999998 78888874
No 362
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=86.48 E-value=14 Score=35.75 Aligned_cols=118 Identities=10% Similarity=0.299 Sum_probs=64.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-----------ceeEEecCCCCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-----------KPLRVKDHMYGL 74 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-----------~pl~~~~h~~~~ 74 (248)
+|..+|+.++.++-. .|..+.+++++.+++..+.+. +.+++-... ..+... |.-..
T Consensus 131 yDw~~~~~i~~i~v~---~vk~V~Ws~~g~~val~t~~~---------i~il~~~~~~~~~~~~~g~e~~f~~~-~E~~~ 197 (443)
T PF04053_consen 131 YDWETGKLIRRIDVS---AVKYVIWSDDGELVALVTKDS---------IYILKYNLEAVAAIPEEGVEDAFELI-HEISE 197 (443)
T ss_dssp E-TTT--EEEEESS----E-EEEEE-TTSSEEEEE-S-S---------EEEEEE-HHHHHHBTTTB-GGGEEEE-EEE-S
T ss_pred EEhhHcceeeEEecC---CCcEEEEECCCCEEEEEeCCe---------EEEEEecchhcccccccCchhceEEE-EEecc
Confidence 566788999998864 488888888877777777764 555443322 012222 22126
Q ss_pred CeeEEEEcCCc-eeeeCCCeEEEEECCCCC--EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 75 PIRDIKFHDNY-VLSMDSSVVKIWSKDNGS--LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 75 pI~sI~F~~d~-l~Ssdd~~IKIWD~~tGk--~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
.|++..|..+- +.+... .+|-+ -+|+ .+.+++ .++-=+...|+.+.++....+.+|..|.++
T Consensus 198 ~IkSg~W~~d~fiYtT~~-~lkYl--~~Ge~~~i~~ld----~~~yllgy~~~~~~ly~~Dr~~~v~~~~ld 262 (443)
T PF04053_consen 198 RIKSGCWVEDCFIYTTSN-HLKYL--VNGETGIIAHLD----KPLYLLGYLPKENRLYLIDRDGNVISYELD 262 (443)
T ss_dssp --SEEEEETTEEEEE-TT-EEEEE--ETTEEEEEEE-S----S--EEEEEETTTTEEEEE-TT--EEEEE--
T ss_pred eeEEEEEEcCEEEEEcCC-eEEEE--EcCCcceEEEcC----CceEEEEEEccCCEEEEEECCCCEEEEEEC
Confidence 89999999887 555555 67773 3343 334443 234445667888899999999999999875
No 363
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=86.36 E-value=3.1 Score=39.04 Aligned_cols=56 Identities=18% Similarity=0.388 Sum_probs=40.7
Q ss_pred eeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eee--eCCCeEEEEECCCCCEEEEeec
Q psy2083 53 AFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLS--MDSSVVKIWSKDNGSLFTCIES 110 (248)
Q Consensus 53 ~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~S--sdd~~IKIWD~~tGk~~~tie~ 110 (248)
.|=.||+.+++-+....-. .+|.+|+.+.+. |.+ ..++.+-|||..+|+.+.+++.
T Consensus 270 eVWv~D~~t~krv~Ri~l~--~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 270 EVWVYDLKTHKRVARIPLE--HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp EEEEEETTTTEEEEEEEEE--EEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred EEEEEECCCCeEEEEEeCC--CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence 4677788888777665433 578999999886 433 3578999999999999999985
No 364
>KOG2041|consensus
Probab=85.66 E-value=1.1 Score=45.76 Aligned_cols=109 Identities=6% Similarity=0.096 Sum_probs=68.7
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc------
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY------ 85 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~------ 85 (248)
..+++++| ++.|.-+-+....+ .+++++.+ |-|-+|=+-.+...-. ....+..-|.+++|+.++
T Consensus 63 mNQtLeGH-~~sV~vvTWNe~~Q-KLTtSDt~-------GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIv 133 (1189)
T KOG2041|consen 63 MNQTLEGH-NASVMVVTWNENNQ-KLTTSDTS-------GLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIV 133 (1189)
T ss_pred hhhhhccC-cceEEEEEeccccc-cccccCCC-------ceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEE
Confidence 45677887 56666555555444 44555443 5899999998854321 123445678899999875
Q ss_pred ------eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 86 ------VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 86 ------l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
|+++-|+. |||..+ +++ .-...+.++||...++.+-..+.+++|+
T Consensus 134 YeDGavIVGsvdGN-RIwgKe-------Lkg---~~l~hv~ws~D~~~~Lf~~ange~hlyd 184 (1189)
T KOG2041|consen 134 YEDGAVIVGSVDGN-RIWGKE-------LKG---QLLAHVLWSEDLEQALFKKANGETHLYD 184 (1189)
T ss_pred EccCCEEEEeeccc-eecchh-------cch---heccceeecccHHHHHhhhcCCcEEEec
Confidence 33332321 466543 121 1223567889998888888888888887
No 365
>PRK13616 lipoprotein LpqB; Provisional
Probab=85.39 E-value=13 Score=37.30 Aligned_cols=118 Identities=8% Similarity=0.130 Sum_probs=68.0
Q ss_pred eeEEEEeCCCCcEEEeecCcee--eee--cCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEE--
Q psy2083 25 FNNLCHIPESGMMFIANENKKI--LTY--YIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKI-- 96 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~--~~~--~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKI-- 96 (248)
...-.|+|+++.+.++.....+ ... ..|.+.+.++..+.+-. .. +.+|.++.|+||+ |+-.-++.|.+
T Consensus 399 ~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~--~~--~g~Issl~wSpDG~RiA~i~~g~v~Va~ 474 (591)
T PRK13616 399 LTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS--RV--PGPISELQLSRDGVRAAMIIGGKVYLAV 474 (591)
T ss_pred CCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh--cc--CCCcCeEEECCCCCEEEEEECCEEEEEE
Confidence 5566778887776665432111 111 12455555776665433 22 3679999999998 22212355544
Q ss_pred -EECCCCCEEEE-----eecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 97 -WSKDNGSLFTC-----IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 97 -WD~~tGk~~~t-----ie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
=....|. ... +.+.-...+.++.|.+++.++ ++.+++.-.+|.++--|+.
T Consensus 475 Vvr~~~G~-~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v~vDG~~ 530 (591)
T PRK13616 475 VEQTEDGQ-YALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYVNLDGSN 530 (591)
T ss_pred EEeCCCCc-eeecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEEecCCcc
Confidence 3434454 221 222101235789999999865 6666777778988776665
No 366
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=85.01 E-value=10 Score=36.91 Aligned_cols=95 Identities=16% Similarity=0.198 Sum_probs=55.0
Q ss_pred cCCeeEEEEcCCCceeEEecCCCCC-CeeEEEEcCCc------eeee-CCCeEEEEECCCCC----EEEEeecC----C-
Q psy2083 50 YIPAFYLYDIRADKPLRVKDHMYGL-PIRDIKFHDNY------VLSM-DSSVVKIWSKDNGS----LFTCIESG----D- 112 (248)
Q Consensus 50 ~~G~V~LwDlRs~~pl~~~~h~~~~-pI~sI~F~~d~------l~Ss-dd~~IKIWD~~tGk----~~~tie~~----h- 112 (248)
+-.++.+||+.+++++++.+-+.+. -...|.|..+- +-++ ...+.++|-.+.|+ .+.++.+. .
T Consensus 220 yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~ 299 (461)
T PF05694_consen 220 YGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWI 299 (461)
T ss_dssp S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS-
T ss_pred ccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCccc
Confidence 3458999999999999998766443 35578887652 3344 34455666545553 22233220 0
Q ss_pred -----------CCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCC
Q psy2083 113 -----------QTQFNNLCHIPESGMMFIANE-NKKILTYYIPS 144 (248)
Q Consensus 113 -----------~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~ 144 (248)
+.=|+++.+|.|..+|.+.+- ++.|+.|+|..
T Consensus 300 lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISD 343 (461)
T PF05694_consen 300 LPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISD 343 (461)
T ss_dssp --GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SS
T ss_pred ccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCC
Confidence 123689999999999998884 69999999976
No 367
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=84.16 E-value=28 Score=33.20 Aligned_cols=105 Identities=13% Similarity=0.147 Sum_probs=62.5
Q ss_pred eeEEEEcCCC---------ceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCCCCEEEEeec-------CCCC
Q psy2083 53 AFYLYDIRAD---------KPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIES-------GDQT 114 (248)
Q Consensus 53 ~V~LwDlRs~---------~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~-------~h~~ 114 (248)
.-.|-|++.. .|+.... ....+|++++.+.=+ .++..++.+.|-|.+.-..+.+-.. ....
T Consensus 58 ~~~l~di~~r~~~~~~~gf~P~~l~~-~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~ 136 (395)
T PF08596_consen 58 PGKLTDISDRAPPSLKEGFLPLTLLD-AKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSS 136 (395)
T ss_dssp S-SEEE-GGG--TT-SEEEEEEEEE----S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS---
T ss_pred CcceEEehhhCCcccccccCchhhee-ccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEeecccccccccccccc
Confidence 4567788764 2443333 336899999998777 4445899999999986555554221 0134
Q ss_pred CeeEEEEeC-----CC---CEEEEEeCCCeEEEEEcCCCCCCCCccccccchh
Q psy2083 115 QFNNLCHIP-----ES---GMMFIANENKKILTYYIPSLGPAPKWCGFLDNLT 159 (248)
Q Consensus 115 ~In~l~~~p-----ds---gll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~t 159 (248)
.|++++|.. |+ -+|++|.+.|++.+|.|-. .+..+|.-.+...|
T Consensus 137 ~vt~ieF~vm~~~~D~ySSi~L~vGTn~G~v~~fkIlp-~~~g~f~v~~~~~~ 188 (395)
T PF08596_consen 137 YVTSIEFSVMTLGGDGYSSICLLVGTNSGNVLTFKILP-SSNGRFSVQFAGAT 188 (395)
T ss_dssp -EEEEEEEEEE-TTSSSEEEEEEEEETTSEEEEEEEEE--GGG-EEEEEEEEE
T ss_pred CeeEEEEEEEecCCCcccceEEEEEeCCCCEEEEEEec-CCCCceEEEEeecc
Confidence 677888851 22 5788999999999998721 23456775555555
No 368
>KOG1920|consensus
Probab=84.00 E-value=7.5 Score=41.83 Aligned_cols=86 Identities=10% Similarity=0.128 Sum_probs=53.2
Q ss_pred eeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee----eCCCeEEEEECCCCCEEE----EeecCCCCCeeEEEEe
Q psy2083 53 AFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS----MDSSVVKIWSKDNGSLFT----CIESGDQTQFNNLCHI 122 (248)
Q Consensus 53 ~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S----sdd~~IKIWD~~tGk~~~----tie~~h~~~In~l~~~ 122 (248)
+|++||-. +..-.+ .-....-=.+++|-|.+ +++ .++..|.++..+ |-.-. .+.. +..+++.++|+
T Consensus 223 kirV~drE-g~Lns~-se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErN-GL~hg~f~l~~p~-de~~ve~L~Wn 298 (1265)
T KOG1920|consen 223 KIRVYDRE-GALNST-SEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERN-GLRHGEFVLPFPL-DEKEVEELAWN 298 (1265)
T ss_pred eEEEeccc-chhhcc-cCcccccccceeecCCCCeEeeeeecCCCCcEEEEecC-CccccccccCCcc-cccchheeeec
Confidence 89999976 321111 00000112578899987 332 245578788765 43222 2222 24569999999
Q ss_pred CCCCEEEE---EeCCCeEEEEEc
Q psy2083 123 PESGMMFI---ANENKKILTYYI 142 (248)
Q Consensus 123 pdsgll~s---a~ed~~I~~w~I 142 (248)
.+|.+|++ ..+...|++|++
T Consensus 299 s~sdiLAv~~~~~e~~~v~lwt~ 321 (1265)
T KOG1920|consen 299 SNSDILAVVTSNLENSLVQLWTT 321 (1265)
T ss_pred CCCCceeeeecccccceEEEEEe
Confidence 99999998 667777999874
No 369
>PRK13684 Ycf48-like protein; Provisional
Probab=83.94 E-value=31 Score=31.86 Aligned_cols=103 Identities=10% Similarity=0.115 Sum_probs=58.0
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECC
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKD 100 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~ 100 (248)
.++++.+.|+ +.+++++..+ .+.. ..+.+ +............++++.+.+++ ++.+..+.+.+=..+
T Consensus 174 ~~~~i~~~~~-g~~v~~g~~G--------~i~~-s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~~G~~~~~s~d 243 (334)
T PRK13684 174 VVRNLRRSPD-GKYVAVSSRG--------NFYS-TWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLARGGQIRFNDPD 243 (334)
T ss_pred eEEEEEECCC-CeEEEEeCCc--------eEEE-EcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEecCCEEEEccCC
Confidence 4566666664 4455556554 2221 11222 22222223334679999999887 555667776543456
Q ss_pred CCCEEEEeecC---CCCCeeEEEEeCCCCEEEEEeCCCeE
Q psy2083 101 NGSLFTCIESG---DQTQFNNLCHIPESGMMFIANENKKI 137 (248)
Q Consensus 101 tGk~~~tie~~---h~~~In~l~~~pdsgll~sa~ed~~I 137 (248)
.|...+.+... ....+.++.+.|++.+++ ++.++.+
T Consensus 244 ~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v 282 (334)
T PRK13684 244 DLESWSKPIIPEITNGYGYLDLAYRTPGEIWA-GGGNGTL 282 (334)
T ss_pred CCCccccccCCccccccceeeEEEcCCCCEEE-EcCCCeE
Confidence 67766654320 023577889999877555 4455644
No 370
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=83.93 E-value=7.2 Score=34.04 Aligned_cols=68 Identities=12% Similarity=0.202 Sum_probs=42.3
Q ss_pred CCeeEEEEcCCc-eeeeCCCeEEEEECCCCCEEEEe-------ec------CCCCCeeEEEEeCCCCEEEEEeCCCeEEE
Q psy2083 74 LPIRDIKFHDNY-VLSMDSSVVKIWSKDNGSLFTCI-------ES------GDQTQFNNLCHIPESGMMFIANENKKILT 139 (248)
Q Consensus 74 ~pI~sI~F~~d~-l~Ssdd~~IKIWD~~tGk~~~ti-------e~------~h~~~In~l~~~pdsgll~sa~ed~~I~~ 139 (248)
.|+-.+....+. ++-+.++.+.+||+.+++.+..- .. .....|.++.+..+|--|++ -.++....
T Consensus 13 s~~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~-lsng~~y~ 91 (219)
T PF07569_consen 13 SPVSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVT-LSNGDSYS 91 (219)
T ss_pred CceEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEE-EeCCCEEE
Confidence 345555554444 44467889999999988764432 10 01457888888866655544 44577777
Q ss_pred EEc
Q psy2083 140 YYI 142 (248)
Q Consensus 140 w~I 142 (248)
|+.
T Consensus 92 y~~ 94 (219)
T PF07569_consen 92 YSP 94 (219)
T ss_pred ecc
Confidence 763
No 371
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=83.77 E-value=12 Score=35.58 Aligned_cols=75 Identities=17% Similarity=0.236 Sum_probs=50.2
Q ss_pred EEEEeCCCCcEEEeecCcee--eeecCC-eeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCC
Q psy2083 27 NLCHIPESGMMFIANENKKI--LTYYIP-AFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDN 101 (248)
Q Consensus 27 ~~~~~~~~g~l~~ag~d~~~--~~~~~G-~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~t 101 (248)
.++..|.||.++..-++.++ ++..-. .|.+|+.. |+++....-.. ..|.++.|+.+. |+=.+|++++++|..
T Consensus 33 ~va~a~~gGpIAi~~d~~k~~~~~~~~p~~I~iys~s-G~ll~~i~w~~-~~iv~~~wt~~e~LvvV~~dG~v~vy~~~- 109 (410)
T PF04841_consen 33 IVAVAPYGGPIAIIRDESKLVPVGSAKPNSIQIYSSS-GKLLSSIPWDS-GRIVGMGWTDDEELVVVQSDGTVRVYDLF- 109 (410)
T ss_pred eEEEcCCCceEEEEecCcccccccCCCCcEEEEECCC-CCEeEEEEECC-CCEEEEEECCCCeEEEEEcCCEEEEEeCC-
Confidence 34556778888777666333 222333 49999986 45555432222 689999998876 555799999999987
Q ss_pred CCE
Q psy2083 102 GSL 104 (248)
Q Consensus 102 Gk~ 104 (248)
|+.
T Consensus 110 G~~ 112 (410)
T PF04841_consen 110 GEF 112 (410)
T ss_pred Cce
Confidence 655
No 372
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=83.40 E-value=8.6 Score=37.35 Aligned_cols=123 Identities=8% Similarity=0.080 Sum_probs=68.1
Q ss_pred eeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-ee------------------eeCCCeEEEEECCCCCEEEE
Q psy2083 47 LTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VL------------------SMDSSVVKIWSKDNGSLFTC 107 (248)
Q Consensus 47 ~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~------------------Ssdd~~IKIWD~~tGk~~~t 107 (248)
.++.+|.+...|.+++++++..... ...+..+|+. .+ ...++.|--.|..+|+.+-+
T Consensus 306 ~g~~~G~l~ald~~tG~~~W~~~~~----~~~~~~~~~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~ 381 (488)
T cd00216 306 HAPKNGFFYVLDRTTGKLISARPEV----EQPMAYDPGLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWE 381 (488)
T ss_pred EECCCceEEEEECCCCcEeeEeEee----ccccccCCceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeE
Confidence 3444579999999999999876422 0112222322 11 12356677788888887776
Q ss_pred eecC-CC------CCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhccccccccCCceeec
Q psy2083 108 IESG-DQ------TQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDDYKFVT 178 (248)
Q Consensus 108 ie~~-h~------~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~~~~yd~y~fvt 178 (248)
.... +. .+...-...-.+++|++++.|+.|..++... -...|-..|. ....-.+...+.++-.||-
T Consensus 382 ~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~t--G~~lW~~~~~---~~~~a~P~~~~~~g~~yv~ 454 (488)
T cd00216 382 KREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATT--GKELWKFRTP---SGIQATPMTYEVNGKQYVG 454 (488)
T ss_pred eeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCC--CceeeEEECC---CCceEcCEEEEeCCEEEEE
Confidence 6541 00 1121111223668899999999999888543 3445553321 1111112223447777765
No 373
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=82.75 E-value=29 Score=30.66 Aligned_cols=111 Identities=13% Similarity=0.098 Sum_probs=65.9
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-eee--eCCCeEEEE-EC
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VLS--MDSSVVKIW-SK 99 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~S--sdd~~IKIW-D~ 99 (248)
.+.+.+.+++++.++.....+ +.-.||=.+.+.+...... +..+..-.|++++ +-+ ..+...+++ +.
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~-------~~~~L~~~~~~~~~~~~~~--g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~ 95 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGD-------GGRSLYVGPAGGPVRPVLT--GGSLTRPSWDPDGWVWTVDDGSGGVRVVRDS 95 (253)
T ss_pred cccceEECCCCCeEEEEEEcC-------CCCEEEEEcCCCcceeecc--CCccccccccCCCCEEEEEcCCCceEEEEec
Confidence 678888999887776655111 1345555555544333222 2467788899987 333 345566666 33
Q ss_pred CCCCEE-EEeecCCCC-CeeEEEEeCCCCEEEEEe---CCCeEEEEEcC
Q psy2083 100 DNGSLF-TCIESGDQT-QFNNLCHIPESGMMFIAN---ENKKILTYYIP 143 (248)
Q Consensus 100 ~tGk~~-~tie~~h~~-~In~l~~~pdsgll~sa~---ed~~I~~w~Ip 143 (248)
.+|+.. ..+...... .|.+|.++|||..++... .+++|.+--|-
T Consensus 96 ~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~ 144 (253)
T PF10647_consen 96 ASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVV 144 (253)
T ss_pred CCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEE
Confidence 444322 122220022 899999999998777766 34777776553
No 374
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=82.64 E-value=25 Score=34.19 Aligned_cols=81 Identities=9% Similarity=0.087 Sum_probs=50.7
Q ss_pred CCeeEEEEcCCCceeEEecCCC-------CCCe--eEEEEcCCc-eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeE--
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMY-------GLPI--RDIKFHDNY-VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNN-- 118 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~-------~~pI--~sI~F~~d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~-- 118 (248)
+|.|.-.|+++++.++...... +.+. ..+....+. ++++.++.|..+|.+||+.+-+.+. ...+..
T Consensus 365 ~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~tG~~lW~~~~--~~~~~a~P 442 (488)
T cd00216 365 KGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATTGKELWKFRT--PSGIQATP 442 (488)
T ss_pred ceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCCCceeeEEEC--CCCceEcC
Confidence 5789999999999988765330 0121 122333333 4456789999999999999998886 444432
Q ss_pred EEEeCCCCEEEEEeCC
Q psy2083 119 LCHIPESGMMFIANEN 134 (248)
Q Consensus 119 l~~~pdsgll~sa~ed 134 (248)
+.+..++ .++++..+
T Consensus 443 ~~~~~~g-~~yv~~~~ 457 (488)
T cd00216 443 MTYEVNG-KQYVGVMV 457 (488)
T ss_pred EEEEeCC-EEEEEEEe
Confidence 2334455 44444433
No 375
>KOG2444|consensus
Probab=82.62 E-value=4.7 Score=35.83 Aligned_cols=110 Identities=8% Similarity=0.102 Sum_probs=65.1
Q ss_pred CCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeE-EEEcCCc---eeeeCCCeEEEEECCCCCEEEEe
Q psy2083 34 SGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRD-IKFHDNY---VLSMDSSVVKIWSKDNGSLFTCI 108 (248)
Q Consensus 34 ~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~s-I~F~~d~---l~Ssdd~~IKIWD~~tGk~~~ti 108 (248)
.|+-+...+.+.+.|+++|.|.+|...--....- +... ..+|-+ |.-..++ .+++.++.|+-|++.-++.+...
T Consensus 62 e~~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~-~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~ 140 (238)
T KOG2444|consen 62 EGQRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSG-EESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYV 140 (238)
T ss_pred cceeecccCceEEeecccceEEEecCCccchHHHhhhcc-cccceeccccccccceeEEeccCCceeeeccccCceeeee
Confidence 3444444555566788889999998772111100 0000 011221 1112222 33467899999999988877766
Q ss_pred ecCCC-CCeeEEEEeCCCCEEEEE--eCCCeEEEEEcCCC
Q psy2083 109 ESGDQ-TQFNNLCHIPESGMMFIA--NENKKILTYYIPSL 145 (248)
Q Consensus 109 e~~h~-~~In~l~~~pdsgll~sa--~ed~~I~~w~Ip~l 145 (248)
-. |. .++..+..+..++.|.++ +-|..++.|.+-.+
T Consensus 141 g~-h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~ 179 (238)
T KOG2444|consen 141 GQ-HNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEKI 179 (238)
T ss_pred cc-ccCCCcceeEEecCCceEEeeccccchhhhhcchhhh
Confidence 65 45 666677777777777777 77777777776443
No 376
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=80.72 E-value=24 Score=34.84 Aligned_cols=68 Identities=13% Similarity=0.197 Sum_probs=43.5
Q ss_pred CCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCee----------EEEEcCCc-eeeeCCCeEEEEECCCC
Q psy2083 34 SGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIR----------DIKFHDNY-VLSMDSSVVKIWSKDNG 102 (248)
Q Consensus 34 ~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~----------sI~F~~d~-l~Ssdd~~IKIWD~~tG 102 (248)
++.++.++.+ |.|.-.|.++++.++.++..-...+. .+.+..+. ++++.++.|--.|.+||
T Consensus 69 ~g~vyv~s~~--------g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~~~~v~v~t~dg~l~ALDa~TG 140 (527)
T TIGR03075 69 DGVMYVTTSY--------SRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALYDGKVFFGTLDARLVALDAKTG 140 (527)
T ss_pred CCEEEEECCC--------CcEEEEECCCCceeeEecCCCCcccccccccccccccceEECCEEEEEcCCCEEEEEECCCC
Confidence 4555555444 47888999999999887543111111 13344444 45556777778899999
Q ss_pred CEEEEee
Q psy2083 103 SLFTCIE 109 (248)
Q Consensus 103 k~~~tie 109 (248)
+.+-...
T Consensus 141 k~~W~~~ 147 (527)
T TIGR03075 141 KVVWSKK 147 (527)
T ss_pred CEEeecc
Confidence 9887655
No 377
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=79.92 E-value=41 Score=34.80 Aligned_cols=127 Identities=15% Similarity=0.165 Sum_probs=77.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEc--CCC--ceeEE-e----cC-----CCCCCeeEEEEcCCc--e
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDI--RAD--KPLRV-K----DH-----MYGLPIRDIKFHDNY--V 86 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDl--Rs~--~pl~~-~----~h-----~~~~pI~sI~F~~d~--l 86 (248)
....+++|.|.....++.-+.. |...+||+ |.. .+.+. . ++ ..-.....|.|.++. +
T Consensus 146 ~~~aDv~FnP~~~~q~AiVD~~-------G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~l 218 (765)
T PF10214_consen 146 FPHADVAFNPWDQRQFAIVDEK-------GNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRL 218 (765)
T ss_pred CccceEEeccCccceEEEEecc-------CcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEE
Confidence 3668999998766655555554 59999999 211 12111 1 11 001235578887664 7
Q ss_pred eeeCCCeEEEEECCCCCEEE-EeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCC----CCCCCCccccccc
Q psy2083 87 LSMDSSVVKIWSKDNGSLFT-CIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPS----LGPAPKWCGFLDN 157 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~tGk~~~-tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~----lG~aP~wcs~ld~ 157 (248)
+-++...+.+.|.+++.... -+.......|.++.-+|+. +.+|+-. ...|-..++.. +-+.=.|-.|+|.
T Consensus 219 Lv~~r~~l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiLT-s~eiiw~~~~~~~~~~~~llSwkH~~d~ 294 (765)
T PF10214_consen 219 LVCNRSKLMLIDFESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFILT-SKEIIWLDVKSSSEKLTRLLSWKHFRDP 294 (765)
T ss_pred EEEcCCceEEEECCCCCccchhccCCChhheeeEEecCCccceEEEEe-cCeEEEEEccCCCCCeeeeeecccccCC
Confidence 77788888899999876533 3333225789999999972 3333332 35554445444 5555578888876
No 378
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=78.75 E-value=52 Score=29.98 Aligned_cols=99 Identities=12% Similarity=0.141 Sum_probs=54.8
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC---CCCCCeeEEEEcCC---cee-----eeC
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH---MYGLPIRDIKFHDN---YVL-----SMD 90 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h---~~~~pI~sI~F~~d---~l~-----Ssd 90 (248)
++.|+.+.|..++.++ ++|.-. +-++....+..||+.+........- .-..||+.+.+..+ .+. +..
T Consensus 36 ~G~V~~l~~~~~~~Ll-v~G~ft-~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgpv~a~~~~~~d~~~~~~aG~~~~g 113 (281)
T PF12768_consen 36 SGTVTDLQWASNNQLL-VGGNFT-LNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGPVTALTFISNDGSNFWVAGRSANG 113 (281)
T ss_pred eEEEEEEEEecCCEEE-EEEeeE-ECCCCceeEEEEecCCCeeeecCCcccccCCCcEEEEEeeccCCceEEEeceecCC
Confidence 4578888888655544 444321 1222345899999998754333321 12368999988533 222 223
Q ss_pred CCeEEEEECCCCCEEEE-eecCCCCCeeEEEEeC
Q psy2083 91 SSVVKIWSKDNGSLFTC-IESGDQTQFNNLCHIP 123 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~t-ie~~h~~~In~l~~~p 123 (248)
+.-|..||-.+...+.. +-. ....|+++.+.|
T Consensus 114 ~~~l~~~dGs~W~~i~~~~~~-~~t~I~~l~~~~ 146 (281)
T PF12768_consen 114 STFLMKYDGSSWSSIGSDILG-SGTTIRGLQVLP 146 (281)
T ss_pred CceEEEEcCCceEeccccccC-CCCEEEEEEEEe
Confidence 45678887554333333 111 145677776644
No 379
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=78.48 E-value=19 Score=34.66 Aligned_cols=148 Identities=11% Similarity=0.064 Sum_probs=82.3
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecC-CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---e
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI-PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---V 86 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~-G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l 86 (248)
|.....+... ...+.+-+++|++..++-..-..+ . ..+.++|+.+++.-.+.... ..--.-.|+||+ +
T Consensus 182 g~~~~~l~~~-~~~~~~p~ws~~~~~~~y~~f~~~-----~~~~i~~~~l~~g~~~~i~~~~--g~~~~P~fspDG~~l~ 253 (425)
T COG0823 182 GYNQQKLTDS-GSLILTPAWSPDGKKLAYVSFELG-----GCPRIYYLDLNTGKRPVILNFN--GNNGAPAFSPDGSKLA 253 (425)
T ss_pred CcceeEeccc-CcceeccccCcCCCceEEEEEecC-----CCceEEEEeccCCccceeeccC--CccCCccCCCCCCEEE
Confidence 4444443333 245667777887776553322211 0 26999999998554433211 233456799987 4
Q ss_pred eee-CCCe--EEEEECCCCCEEEEeecCCCCCee-EEEEeCCCCEEEEEe-CCCeEEEEEcCCCCCCCCccccccchhhh
Q psy2083 87 LSM-DSSV--VKIWSKDNGSLFTCIESGDQTQFN-NLCHIPESGMMFIAN-ENKKILTYYIPSLGPAPKWCGFLDNLTEE 161 (248)
Q Consensus 87 ~Ss-dd~~--IKIWD~~tGk~~~tie~~h~~~In-~l~~~pdsgll~sa~-ed~~I~~w~Ip~lG~aP~wcs~ld~~tee 161 (248)
.++ .|+. |-+.|..++. +..+.. ...++ .=.|+|||..|+-++ .++.-.+|-...-|.. ...+|..
T Consensus 254 f~~~rdg~~~iy~~dl~~~~-~~~Lt~--~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~------~~riT~~ 324 (425)
T COG0823 254 FSSSRDGSPDIYLMDLDGKN-LPRLTN--GFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQ------VTRLTFS 324 (425)
T ss_pred EEECCCCCccEEEEcCCCCc-ceeccc--CCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCc------eeEeecc
Confidence 443 4555 4455666544 555553 33333 346889997766665 4566677765554444 3677776
Q ss_pred hhccccccccCCce
Q psy2083 162 LEENIIENVYDDYK 175 (248)
Q Consensus 162 ~e~~~~~~~yd~y~ 175 (248)
+.-...+.+..|-+
T Consensus 325 ~~~~~~p~~SpdG~ 338 (425)
T COG0823 325 GGGNSNPVWSPDGD 338 (425)
T ss_pred CCCCcCccCCCCCC
Confidence 65544444433333
No 380
>KOG3630|consensus
Probab=78.06 E-value=5.7 Score=42.62 Aligned_cols=110 Identities=12% Similarity=0.169 Sum_probs=67.5
Q ss_pred CCeeEEEEeCCCCcEEEe-ecCceeeeecCCeeEEEEcCCC--------ceeEEecCCCC--CCeeEEEEcCCc----ee
Q psy2083 23 TQFNNLCHIPESGMMFIA-NENKKILTYYIPAFYLYDIRAD--------KPLRVKDHMYG--LPIRDIKFHDNY----VL 87 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~a-g~d~~~~~~~~G~V~LwDlRs~--------~pl~~~~h~~~--~pI~sI~F~~d~----l~ 87 (248)
-.++..+.++|....++. +.++ -.|..||+++- +|+..-..... .-.-++.|+|.- ++
T Consensus 101 ~pi~~~v~~~D~t~s~v~~tsng-------~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av 173 (1405)
T KOG3630|consen 101 IPIVIFVCFHDATDSVVVSTSNG-------EAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAV 173 (1405)
T ss_pred ccceEEEeccCCceEEEEEecCC-------ceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhh
Confidence 345666677763332221 1222 27999999873 34432111111 234466777763 55
Q ss_pred eeCCCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 88 SMDSSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 88 Ssdd~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+..|+.|++.-+.- -..++++.. ....+++||+|-|..+++|-..++|..|-
T Consensus 174 ~l~dlsl~V~~~~~~~~~v~s~p~--t~~~Tav~WSprGKQl~iG~nnGt~vQy~ 226 (1405)
T KOG3630|consen 174 DLSDLSLRVKSTKQLAQNVTSFPV--TNSQTAVLWSPRGKQLFIGRNNGTEVQYE 226 (1405)
T ss_pred hccccchhhhhhhhhhhhhcccCc--ccceeeEEeccccceeeEecCCCeEEEee
Confidence 56677777765542 233444444 56788999999999999999999998873
No 381
>KOG4499|consensus
Probab=77.52 E-value=12 Score=33.82 Aligned_cols=37 Identities=16% Similarity=0.249 Sum_probs=30.2
Q ss_pred eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP 123 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p 123 (248)
|++-+.++|--.|+.|||.+..+.- -...|+|+||.-
T Consensus 227 Va~~ng~~V~~~dp~tGK~L~eikl-Pt~qitsccFgG 263 (310)
T KOG4499|consen 227 VATFNGGTVQKVDPTTGKILLEIKL-PTPQITSCCFGG 263 (310)
T ss_pred EEEecCcEEEEECCCCCcEEEEEEc-CCCceEEEEecC
Confidence 5555778888899999999999885 167899999953
No 382
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=77.25 E-value=13 Score=32.42 Aligned_cols=26 Identities=8% Similarity=0.382 Sum_probs=18.7
Q ss_pred CCCcEEEeecCceeeeecCCeeEEEEcCCCceeE
Q psy2083 33 ESGMMFIANENKKILTYYIPAFYLYDIRADKPLR 66 (248)
Q Consensus 33 ~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~ 66 (248)
.+.++++...+ |.+.+||+.+++.+.
T Consensus 21 ~~~~Ll~iT~~--------G~l~vWnl~~~k~~~ 46 (219)
T PF07569_consen 21 NGSYLLAITSS--------GLLYVWNLKKGKAVL 46 (219)
T ss_pred CCCEEEEEeCC--------CeEEEEECCCCeecc
Confidence 35556666666 499999999986543
No 383
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=77.00 E-value=6.1 Score=26.17 Aligned_cols=33 Identities=9% Similarity=0.289 Sum_probs=24.6
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK 63 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~ 63 (248)
...|..++++|...+++.+..+ |.|.+|.+ +++
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~--------g~v~v~Rl-~~q 43 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTED--------GEVLVYRL-NWQ 43 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECC--------CeEEEEEC-CCc
Confidence 3578899999987766666665 48999998 443
No 384
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=77.00 E-value=36 Score=29.95 Aligned_cols=85 Identities=14% Similarity=0.290 Sum_probs=55.0
Q ss_pred eeEEEEcCCC--ceeEEecCCCCCCeeEEEEcCCc--eeeeC----CC---eEEE---EECC--CCCEEE----------
Q psy2083 53 AFYLYDIRAD--KPLRVKDHMYGLPIRDIKFHDNY--VLSMD----SS---VVKI---WSKD--NGSLFT---------- 106 (248)
Q Consensus 53 ~V~LwDlRs~--~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd----d~---~IKI---WD~~--tGk~~~---------- 106 (248)
.|..||+... +++..+..- ..|..+.++..+ |++=. .. .+|+ |... ..+++.
T Consensus 39 ~Vev~~l~~~~~~~~~~F~Tv--~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~vRiaG~~v~~ 116 (215)
T PF14761_consen 39 KVEVYDLEQEECPLLCTFSTV--GRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRVRIAGHRVTP 116 (215)
T ss_pred EEEEEEcccCCCceeEEEcch--hheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEEEEccccccc
Confidence 8999999933 556666555 689999999877 55521 12 5666 5443 122222
Q ss_pred -----------Eee-cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 107 -----------CIE-SGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 107 -----------tie-~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
-+| | -+.++.+++-.|-+|-|++|+ ++++.+|-
T Consensus 117 ~~~~~~~~qleiiElP-l~~~p~ciaCC~~tG~LlVg~-~~~l~lf~ 161 (215)
T PF14761_consen 117 SFNESSKDQLEIIELP-LSEPPLCIACCPVTGNLLVGC-GNKLVLFT 161 (215)
T ss_pred CCCCccccceEEEEec-CCCCCCEEEecCCCCCEEEEc-CCEEEEEE
Confidence 222 1 134677888889999899998 55677774
No 385
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=76.75 E-value=11 Score=23.06 Aligned_cols=30 Identities=10% Similarity=0.055 Sum_probs=23.4
Q ss_pred CCCeEEEEECCCCCEEEEeecCCCCCeeEEEE
Q psy2083 90 DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCH 121 (248)
Q Consensus 90 dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~ 121 (248)
.+++|.++|..+++.+..+.. ......++|
T Consensus 12 ~~~~v~~id~~~~~~~~~i~v--g~~P~~i~~ 41 (42)
T TIGR02276 12 GSNTVSVIDTATNKVIATIPV--GGYPFGVAV 41 (42)
T ss_pred CCCEEEEEECCCCeEEEEEEC--CCCCceEEe
Confidence 578999999999999999887 344455655
No 386
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=74.86 E-value=45 Score=31.02 Aligned_cols=122 Identities=9% Similarity=0.094 Sum_probs=66.5
Q ss_pred cchhcCceeEEEecCCCC-CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc-eeEEecCCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIESGDQT-QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK-PLRVKDHMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~-~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~-pl~~~~h~~~~pI~sI~F~~ 83 (248)
||...++...++.+-..- .--.=+|+||+.+|.+.-.|- -..-|.|-+||.|.+- -+-.+ ..|+..=..+.+.+
T Consensus 96 fD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndf---d~~rGViGvYd~r~~fqrvgE~-~t~GiGpHev~lm~ 171 (366)
T COG3490 96 FDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDF---DPNRGVIGVYDAREGFQRVGEF-STHGIGPHEVTLMA 171 (366)
T ss_pred ECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCC---CCCCceEEEEecccccceeccc-ccCCcCcceeEEec
Confidence 555566655554321001 111235788877777664431 1234899999999652 22222 12334446677777
Q ss_pred Cc--eeeeC-------------------CCeEEEEECCCCCEEEEeec---CCCCCeeEEEEeCCCCEEEEE
Q psy2083 84 NY--VLSMD-------------------SSVVKIWSKDNGSLFTCIES---GDQTQFNNLCHIPESGMMFIA 131 (248)
Q Consensus 84 d~--l~Ssd-------------------d~~IKIWD~~tGk~~~tie~---~h~~~In~l~~~pdsgll~sa 131 (248)
|+ ++.++ .-++-+-|..+|+++....- -+.-.|+.+...+||...+.+
T Consensus 172 DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgc 243 (366)
T COG3490 172 DGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGC 243 (366)
T ss_pred CCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEE
Confidence 76 22222 12344566667776655432 123578889998888765544
No 387
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=74.19 E-value=16 Score=22.26 Aligned_cols=30 Identities=13% Similarity=0.347 Sum_probs=21.7
Q ss_pred CCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe
Q psy2083 32 PESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK 68 (248)
Q Consensus 32 ~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~ 68 (248)
|+++.+++++... ++|.++|+.+++.+...
T Consensus 1 pd~~~lyv~~~~~-------~~v~~id~~~~~~~~~i 30 (42)
T TIGR02276 1 PDGTKLYVTNSGS-------NTVSVIDTATNKVIATI 30 (42)
T ss_pred CCCCEEEEEeCCC-------CEEEEEECCCCeEEEEE
Confidence 4667778776654 48999999888766554
No 388
>PF08954 DUF1900: Domain of unknown function (DUF1900); InterPro: IPR015049 This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences. It has no known function []. ; PDB: 2B4E_A 2AQ5_A.
Probab=73.98 E-value=8.8 Score=31.25 Aligned_cols=69 Identities=10% Similarity=0.213 Sum_probs=36.1
Q ss_pred EEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe--cCCCCCCeeEEEEcCCcee-eeCCCeEEEEECCCCC
Q psy2083 28 LCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK--DHMYGLPIRDIKFHDNYVL-SMDSSVVKIWSKDNGS 103 (248)
Q Consensus 28 ~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~--~h~~~~pI~sI~F~~d~l~-Ssdd~~IKIWD~~tGk 103 (248)
--|.+|.++++.+|-.+ ++|+.|.+-...|.... .+....+.+.++|.|...+ -..--+.|++-+.+.+
T Consensus 16 P~yD~dt~llyl~gKGD-------~~ir~yEv~~~~p~l~~l~~~~s~~~~~G~~~lPK~~~dv~~~Ei~R~lkl~~~~ 87 (136)
T PF08954_consen 16 PFYDEDTNLLYLAGKGD-------GNIRYYEVSDESPYLHYLSEYRSPEPQKGFAFLPKRACDVMKCEIARFLKLTNDK 87 (136)
T ss_dssp EEE-TTT-EEEEEETT--------S-EEEEEE-SSTTSEEEEEEE--SS--SEEEE--GGGS-GGGTEEEEEEEEETTE
T ss_pred eeEcCCCCEEEEEeccC-------cEEEEEEEcCCCCceEEccccccCCCeEeeEecCcccCCchheeeeeeeeecCCc
Confidence 33445678888777654 59999999888764432 3444578999999997521 1222255566555443
No 389
>PRK10115 protease 2; Provisional
Probab=73.59 E-value=1e+02 Score=31.48 Aligned_cols=113 Identities=8% Similarity=0.018 Sum_probs=63.1
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee-CC-----CeEE
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM-DS-----SVVK 95 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss-dd-----~~IK 95 (248)
+..+.++|++.+++.+.+.+ |+...+|++-|+.++..+...-.+ .. ..++|++|+ +.+. ++ ..|.
T Consensus 129 l~~~~~Spdg~~la~~~d~~---G~E~~~l~v~d~~tg~~l~~~i~~--~~-~~~~w~~D~~~~~y~~~~~~~~~~~~v~ 202 (686)
T PRK10115 129 LGGMAITPDNTIMALAEDFL---SRRQYGIRFRNLETGNWYPELLDN--VE-PSFVWANDSWTFYYVRKHPVTLLPYQVW 202 (686)
T ss_pred EeEEEECCCCCEEEEEecCC---CcEEEEEEEEECCCCCCCCccccC--cc-eEEEEeeCCCEEEEEEecCCCCCCCEEE
Confidence 55566778777665443332 344568999999988744322111 11 468999875 3343 32 3677
Q ss_pred EEECCCC--CEEEEeecCCCCCee-EEEEeCCCCEEEEEeCC---CeEEEEEcCC
Q psy2083 96 IWSKDNG--SLFTCIESGDQTQFN-NLCHIPESGMMFIANEN---KKILTYYIPS 144 (248)
Q Consensus 96 IWD~~tG--k~~~tie~~h~~~In-~l~~~pdsgll~sa~ed---~~I~~w~Ip~ 144 (248)
.|++.++ +-..-++.. ..... ++..+.|+..++..+.+ +.+.+|+.+.
T Consensus 203 ~h~lgt~~~~d~lv~~e~-~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~ 256 (686)
T PRK10115 203 RHTIGTPASQDELVYEEK-DDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAEL 256 (686)
T ss_pred EEECCCChhHCeEEEeeC-CCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcC
Confidence 8888887 333334421 22222 33344477766665543 4566776433
No 390
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=72.51 E-value=76 Score=28.81 Aligned_cols=114 Identities=15% Similarity=0.324 Sum_probs=66.5
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCcee---EEecCCCCCCe---eE
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPL---RVKDHMYGLPI---RD 78 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl---~~~~h~~~~pI---~s 78 (248)
.+|+.+-+.+.++.-. +.=+.+| .++..++.+.+++ .+..+|..+-+.. .+.+. +.|| |-
T Consensus 114 ~yd~~tl~~~~~~~y~--~EGWGLt--~dg~~Li~SDGS~--------~L~~~dP~~f~~~~~i~V~~~--g~pv~~LNE 179 (264)
T PF05096_consen 114 VYDPNTLKKIGTFPYP--GEGWGLT--SDGKRLIMSDGSS--------RLYFLDPETFKEVRTIQVTDN--GRPVSNLNE 179 (264)
T ss_dssp EEETTTTEEEEEEE-S--SS--EEE--ECSSCEEEE-SSS--------EEEEE-TTT-SEEEEEE-EET--TEE---EEE
T ss_pred EEccccceEEEEEecC--CcceEEE--cCCCEEEEECCcc--------ceEEECCcccceEEEEEEEEC--CEECCCcEe
Confidence 4677777788887653 3446777 3344555554444 7999998876543 33333 3555 45
Q ss_pred EEEcCCceeee---CCCeEEEEECCCCCEEEEeec---------C-----CCCCeeEEEEeCCCCEEEEEeC
Q psy2083 79 IKFHDNYVLSM---DSSVVKIWSKDNGSLFTCIES---------G-----DQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 79 I~F~~d~l~Ss---dd~~IKIWD~~tGk~~~tie~---------~-----h~~~In~l~~~pdsgll~sa~e 133 (248)
+.|....|.+. .|.+++| |+.+|+....+.- . ...-.|.+++.|+++.|++.+-
T Consensus 180 LE~i~G~IyANVW~td~I~~I-dp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK 250 (264)
T PF05096_consen 180 LEYINGKIYANVWQTDRIVRI-DPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGK 250 (264)
T ss_dssp EEEETTEEEEEETTSSEEEEE-ETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEET
T ss_pred EEEEcCEEEEEeCCCCeEEEE-eCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeC
Confidence 67775445553 4556654 9999999887742 0 0245899999998877776653
No 391
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=72.03 E-value=69 Score=29.45 Aligned_cols=98 Identities=13% Similarity=0.250 Sum_probs=53.8
Q ss_pred EEEEe-CCCCcEE-EeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeE-EEEcCCc---e-eeeC----CCeEE
Q psy2083 27 NLCHI-PESGMMF-IANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRD-IKFHDNY---V-LSMD----SSVVK 95 (248)
Q Consensus 27 ~~~~~-~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~s-I~F~~d~---l-~Ssd----d~~IK 95 (248)
...++ +++..++ ..-.++ =.+|.++|...+.+.... .+ ...|++ +.++++. . .+.. .+.|-
T Consensus 239 ~~~~~~~~~~~~l~~s~~~G------~~hly~~~~~~~~~~~lT-~G-~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY 310 (353)
T PF00930_consen 239 PPHFLGPDGNEFLWISERDG------YRHLYLYDLDGGKPRQLT-SG-DWEVTSILGWDEDNNRIYFTANGDNPGERHLY 310 (353)
T ss_dssp EEEE-TTTSSEEEEEEETTS------SEEEEEEETTSSEEEESS--S-SS-EEEEEEEECTSSEEEEEESSGGTTSBEEE
T ss_pred ccccccCCCCEEEEEEEcCC------CcEEEEEcccccceeccc-cC-ceeecccceEcCCCCEEEEEecCCCCCceEEE
Confidence 56665 5555444 443332 147888888887654332 22 256766 4566664 2 2322 22333
Q ss_pred EEECCCCCEEEEeecCCCCCe-eEEEEeCCCCEEEEEeCC
Q psy2083 96 IWSKDNGSLFTCIESGDQTQF-NNLCHIPESGMMFIANEN 134 (248)
Q Consensus 96 IWD~~tGk~~~tie~~h~~~I-n~l~~~pdsgll~sa~ed 134 (248)
.-+.+++.....|.. .... .++.|+||+++++..+..
T Consensus 311 ~v~~~~~~~~~~LT~--~~~~~~~~~~Spdg~y~v~~~s~ 348 (353)
T PF00930_consen 311 RVSLDSGGEPKCLTC--EDGDHYSASFSPDGKYYVDTYSG 348 (353)
T ss_dssp EEETTETTEEEESST--TSSTTEEEEE-TTSSEEEEEEES
T ss_pred EEEeCCCCCeEeccC--CCCCceEEEECCCCCEEEEEEcC
Confidence 334453556677776 3344 489999999998876654
No 392
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=71.78 E-value=52 Score=33.99 Aligned_cols=73 Identities=12% Similarity=0.258 Sum_probs=48.1
Q ss_pred CCeeEEEEc--CCc---eeeeCCCeEEEEECCC--CCEEE--EeecCCCCCeeEEEEeCCC----C--EEEEEeCCCeEE
Q psy2083 74 LPIRDIKFH--DNY---VLSMDSSVVKIWSKDN--GSLFT--CIESGDQTQFNNLCHIPES----G--MMFIANENKKIL 138 (248)
Q Consensus 74 ~pI~sI~F~--~d~---l~Ssdd~~IKIWD~~t--Gk~~~--tie~~h~~~In~l~~~pds----g--ll~sa~ed~~I~ 138 (248)
....++++| ... ++|++...|.||-... .+... ..+ +...|-+|+|.++. | .+++++-.|.+.
T Consensus 164 ~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~~--~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~ 241 (717)
T PF08728_consen 164 ASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPSHQ--HSHNIPNVSFLDDDLDPNGHVKVVATDISGEVW 241 (717)
T ss_pred CceeEEEEEecCcceEEEEecCCceEEEEEEeccccccccccccc--cccCCCeeEeecCCCCCccceEEEEEeccCcEE
Confidence 568899998 444 4455677788765432 22111 222 36789999998755 2 677788899999
Q ss_pred EEEcC-CCCCC
Q psy2083 139 TYYIP-SLGPA 148 (248)
Q Consensus 139 ~w~Ip-~lG~a 148 (248)
+|.|+ ..+..
T Consensus 242 ~~~I~~~~~~g 252 (717)
T PF08728_consen 242 TFKIKFKEGRG 252 (717)
T ss_pred EEEEEEeeccC
Confidence 99994 44544
No 393
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=70.21 E-value=99 Score=29.56 Aligned_cols=64 Identities=11% Similarity=0.032 Sum_probs=40.9
Q ss_pred CCeeEEEEcCCc--eeeeCCCeEEEEECCCCCE-----EEEeecC-CCCCeeEEEEeCCCCEEEEEeCCCeEEE
Q psy2083 74 LPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSL-----FTCIESG-DQTQFNNLCHIPESGMMFIANENKKILT 139 (248)
Q Consensus 74 ~pI~sI~F~~d~--l~Ssdd~~IKIWD~~tGk~-----~~tie~~-h~~~In~l~~~pdsgll~sa~ed~~I~~ 139 (248)
..+.++.|.+++ ++.+..+.+ +|....|+. +..+.-. ....+.++.|.+++.++++| ..+.+..
T Consensus 281 ~~l~~v~~~~dg~l~l~g~~G~l-~~S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~ 352 (398)
T PLN00033 281 RRIQNMGWRADGGLWLLTRGGGL-YVSKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAAG-GSGILLR 352 (398)
T ss_pred cceeeeeEcCCCCEEEEeCCceE-EEecCCCCcccccceeecccCCCCcceEEEEEcCCCcEEEEE-CCCcEEE
Confidence 568899999887 556666665 677777763 3333210 12458899998887765544 5665443
No 394
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=69.90 E-value=94 Score=28.84 Aligned_cols=60 Identities=8% Similarity=0.132 Sum_probs=35.5
Q ss_pred CCeeEEEEcCCc-eee--eCC-------------------CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEE
Q psy2083 74 LPIRDIKFHDNY-VLS--MDS-------------------SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIA 131 (248)
Q Consensus 74 ~pI~sI~F~~d~-l~S--sdd-------------------~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa 131 (248)
...+.+.|.||+ |.- ++. +.|--+|.++++ +..+..+ -...+.++|+|+|.++++-
T Consensus 124 ~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~-~e~~a~G-~rnp~Gl~~d~~G~l~~td 201 (367)
T TIGR02604 124 HSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPDGGK-LRVVAHG-FQNPYGHSVDSWGDVFFCD 201 (367)
T ss_pred ccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEecCCCe-EEEEecC-cCCCccceECCCCCEEEEc
Confidence 457899999997 222 210 233344555443 3333332 3456789999998887765
Q ss_pred eCCC
Q psy2083 132 NENK 135 (248)
Q Consensus 132 ~ed~ 135 (248)
+.+.
T Consensus 202 n~~~ 205 (367)
T TIGR02604 202 NDDP 205 (367)
T ss_pred cCCC
Confidence 5443
No 395
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=69.50 E-value=75 Score=33.13 Aligned_cols=68 Identities=13% Similarity=0.182 Sum_probs=43.1
Q ss_pred CCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCC-------CeeEEEEcCC------------------c-ee
Q psy2083 34 SGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGL-------PIRDIKFHDN------------------Y-VL 87 (248)
Q Consensus 34 ~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~-------pI~sI~F~~d------------------~-l~ 87 (248)
++.++.++.+ +.|.-.|.++++.++.++..... ..+.+.+... . ++
T Consensus 194 gg~lYv~t~~--------~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~ 265 (764)
T TIGR03074 194 GDTLYLCTPH--------NKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIIL 265 (764)
T ss_pred CCEEEEECCC--------CeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEE
Confidence 4455555554 47889999999999887644211 1223444321 2 44
Q ss_pred eeCCCeEEEEECCCCCEEEEee
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIE 109 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie 109 (248)
.+.|+.+--.|.+||+....+.
T Consensus 266 ~T~Dg~LiALDA~TGk~~W~fg 287 (764)
T TIGR03074 266 PTSDARLIALDADTGKLCEDFG 287 (764)
T ss_pred ecCCCeEEEEECCCCCEEEEec
Confidence 5567777778999999887654
No 396
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=69.33 E-value=1.1e+02 Score=29.31 Aligned_cols=65 Identities=12% Similarity=0.192 Sum_probs=44.6
Q ss_pred CCeeEEEEcCCc--eeeeCCCeEEEEECCCCCEEEEeec--CCCCCeeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 74 LPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIES--GDQTQFNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 74 ~pI~sI~F~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~--~h~~~In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
..+.++.|.++. ++++..+.|... ...|+.++.... .-+.++..+.|.+++.. ++.++++.|.-|
T Consensus 328 ~~l~~v~~~~d~~~~a~G~~G~v~~s-~D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g-~~~G~~G~il~~ 396 (398)
T PLN00033 328 FGILDVGYRSKKEAWAAGGSGILLRS-TDGGKSWKRDKGADNIAANLYSVKFFDDKKG-FVLGNDGVLLRY 396 (398)
T ss_pred cceEEEEEcCCCcEEEEECCCcEEEe-CCCCcceeEccccCCCCcceeEEEEcCCCce-EEEeCCcEEEEe
Confidence 468999999886 777888877554 466888777652 11346788888776554 455567777655
No 397
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=69.27 E-value=21 Score=31.09 Aligned_cols=60 Identities=17% Similarity=0.362 Sum_probs=45.5
Q ss_pred eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCC
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAP 149 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP 149 (248)
++++++| +-+++.........+.. ..+|..+.+.|+-+++++-++ +++.+|+++.|.+.+
T Consensus 11 ~vGt~~G-l~~~~~~~~~~~~~i~~--~~~I~ql~vl~~~~~llvLsd-~~l~~~~L~~l~~~~ 70 (275)
T PF00780_consen 11 LVGTEDG-LYVYDLSDPSKPTRILK--LSSITQLSVLPELNLLLVLSD-GQLYVYDLDSLEPVS 70 (275)
T ss_pred EEEECCC-EEEEEecCCccceeEee--cceEEEEEEecccCEEEEEcC-CccEEEEchhhcccc
Confidence 6677888 77888844444444444 466999999999988877764 999999999987665
No 398
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=68.37 E-value=39 Score=33.01 Aligned_cols=34 Identities=15% Similarity=0.375 Sum_probs=22.9
Q ss_pred CeeEEEEcC----C-c-ee-eeCCCeEEEEECCCCCEEEEe
Q psy2083 75 PIRDIKFHD----N-Y-VL-SMDSSVVKIWSKDNGSLFTCI 108 (248)
Q Consensus 75 pI~sI~F~~----d-~-l~-Ssdd~~IKIWD~~tGk~~~ti 108 (248)
.+.++..+. + . +. -+-|+++||||.++++++.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 344555554 2 2 43 478999999999999997665
No 399
>KOG3621|consensus
Probab=68.33 E-value=7.3 Score=39.64 Aligned_cols=71 Identities=13% Similarity=0.177 Sum_probs=45.6
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce--eEEe---cCCCCCCeeEEEEcCCc--eeeeC-CCeEE
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP--LRVK---DHMYGLPIRDIKFHDNY--VLSMD-SSVVK 95 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p--l~~~---~h~~~~pI~sI~F~~d~--l~Ssd-d~~IK 95 (248)
.++.++.-++...++++|+++ |.|.++-+..+.| +... +..|+..|++++|++++ +.++| .|+|.
T Consensus 77 ~~~~~~~vs~~e~lvAagt~~-------g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~ 149 (726)
T KOG3621|consen 77 GITCVRSVSSVEYLVAAGTAS-------GRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVV 149 (726)
T ss_pred ceEEEEEecchhHhhhhhcCC-------ceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEE
Confidence 344444444455666666665 5899999988643 2222 33345789999999997 88886 45665
Q ss_pred EEECCC
Q psy2083 96 IWSKDN 101 (248)
Q Consensus 96 IWD~~t 101 (248)
.--+++
T Consensus 150 ~~~L~s 155 (726)
T KOG3621|consen 150 LTELDS 155 (726)
T ss_pred EEEech
Confidence 544443
No 400
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=67.90 E-value=28 Score=33.56 Aligned_cols=96 Identities=14% Similarity=0.201 Sum_probs=53.2
Q ss_pred EEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc----eeeeCCCe--EEEEECCCC
Q psy2083 29 CHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY----VLSMDSSV--VKIWSKDNG 102 (248)
Q Consensus 29 ~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~----l~Ssdd~~--IKIWD~~tG 102 (248)
.++|||..++-+++.++ -..|.++|+..+.+-.......+ .. .-.++||+ +.++.++. |-+.|+.+|
T Consensus 288 s~spdG~~ivf~Sdr~G-----~p~I~~~~~~g~~~~riT~~~~~-~~-~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~ 360 (425)
T COG0823 288 SWSPDGSKIVFTSDRGG-----RPQIYLYDLEGSQVTRLTFSGGG-NS-NPVWSPDGDKIVFESSSGGQWDIDKNDLASG 360 (425)
T ss_pred cCCCCCCEEEEEeCCCC-----CcceEEECCCCCceeEeeccCCC-Cc-CccCCCCCCEEEEEeccCCceeeEEeccCCC
Confidence 45677777665544432 23788888888766444333322 22 55678887 22333443 666777766
Q ss_pred CEEEEeecCCCCCeeEEEEeCCCCEEEEEeC
Q psy2083 103 SLFTCIESGDQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 103 k~~~tie~~h~~~In~l~~~pdsgll~sa~e 133 (248)
..+..+.. ..-...-++.|||..++..+.
T Consensus 361 ~~~~~lt~--~~~~e~ps~~~ng~~i~~~s~ 389 (425)
T COG0823 361 GKIRILTS--TYLNESPSWAPNGRMIMFSSG 389 (425)
T ss_pred CcEEEccc--cccCCCCCcCCCCceEEEecc
Confidence 64444443 333334566666665554443
No 401
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=67.77 E-value=37 Score=33.55 Aligned_cols=58 Identities=10% Similarity=0.118 Sum_probs=40.0
Q ss_pred CCeeEEEEcCCCceeEEecCCCCCCe-eEEEEcCCc-eee-eCCCeEEEEECCCCCEEEEeec
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMYGLPI-RDIKFHDNY-VLS-MDSSVVKIWSKDNGSLFTCIES 110 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~~~pI-~sI~F~~d~-l~S-sdd~~IKIWD~~tGk~~~tie~ 110 (248)
.|.+.=+|+.+++.++..... .|. -+..-...+ +.. ..++.++.+|.+||+.+-.++.
T Consensus 440 ~g~l~AiD~~tGk~~W~~~~~--~p~~~~~l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~ 500 (527)
T TIGR03075 440 MGSLIAWDPITGKIVWEHKED--FPLWGGVLATAGDLVFYGTLEGYFKAFDAKTGEELWKFKT 500 (527)
T ss_pred ceeEEEEeCCCCceeeEecCC--CCCCCcceEECCcEEEEECCCCeEEEEECCCCCEeEEEeC
Confidence 467999999999888865433 332 121112223 444 4589999999999999998886
No 402
>KOG3617|consensus
Probab=66.91 E-value=23 Score=37.44 Aligned_cols=63 Identities=6% Similarity=0.058 Sum_probs=40.1
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCcee---EEecCCCCCCeeEEEEc
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPL---RVKDHMYGLPIRDIKFH 82 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl---~~~~h~~~~pI~sI~F~ 82 (248)
+..++....|...++.+.|+|+|+.++++-.- |.|.+|-.-....+ ....|.++.-++-++|-
T Consensus 91 ~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~--------g~v~lwr~d~~g~~q~~~~~~hel~~~ltl~cfR 156 (1416)
T KOG3617|consen 91 TETHTVVETHPAPIQGLDWSHDGTVLMTLDNP--------GSVHLWRYDVIGEIQTSNIMQHELNDQLTLWCFR 156 (1416)
T ss_pred ceeeeeccCCCCCceeEEecCCCCeEEEcCCC--------ceeEEEEeeeccccccchhhhhHhhceeeEEEEe
Confidence 34455544458899999999988877776444 47888854421111 22356666667777763
No 403
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=65.96 E-value=75 Score=30.68 Aligned_cols=79 Identities=14% Similarity=0.268 Sum_probs=49.2
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCC-CeeEEEE------------c----CC-
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGL-PIRDIKF------------H----DN- 84 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~-pI~sI~F------------~----~d- 84 (248)
-.+.+++-.|. +.++++.++- |.|.|+|+.++..+...- +|.. .+-.|.- + +.
T Consensus 308 R~~~~i~~sP~-~~laA~tDsl-------GRV~LiD~~~~~vvrmWK-GYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~ 378 (415)
T PF14655_consen 308 REGESICLSPS-GRLAAVTDSL-------GRVLLIDVARGIVVRMWK-GYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRF 378 (415)
T ss_pred ceEEEEEECCC-CCEEEEEcCC-------CcEEEEECCCChhhhhhc-cCccceEEEEEeecccccccccccccCCCCcc
Confidence 45788888886 5566665554 699999999986554311 1111 1111110 0 01
Q ss_pred -c---eeeeCCCeEEEEECCCCCEEEEeec
Q psy2083 85 -Y---VLSMDSSVVKIWSKDNGSLFTCIES 110 (248)
Q Consensus 85 -~---l~Ssdd~~IKIWD~~tGk~~~tie~ 110 (248)
. |..--.+.|.||+.++|.-+.++..
T Consensus 379 ~l~LvIyaprRg~lEvW~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 379 ALFLVIYAPRRGILEVWSMRQGPRVAAFNV 408 (415)
T ss_pred eEEEEEEeccCCeEEEEecCCCCEEEEEEe
Confidence 1 3344688999999999988888764
No 404
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=65.32 E-value=75 Score=25.99 Aligned_cols=85 Identities=11% Similarity=0.102 Sum_probs=50.4
Q ss_pred CeeEEEEcCCCc--------eeEEecCCCCCCeeEEE---EcCCc----eeeeCCCeEEEEECCCCCEEEEeecCCCCCe
Q psy2083 52 PAFYLYDIRADK--------PLRVKDHMYGLPIRDIK---FHDNY----VLSMDSSVVKIWSKDNGSLFTCIESGDQTQF 116 (248)
Q Consensus 52 G~V~LwDlRs~~--------pl~~~~h~~~~pI~sI~---F~~d~----l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~I 116 (248)
|+|.|++..... ++....-. ..|++|+ |.|+. |+-+....+-.||.++..-+---+- +..+
T Consensus 20 gKV~IH~ph~~~~~~~~~~~~i~~LNin--~~italaaG~l~~~~~~D~LliGt~t~llaYDV~~N~d~Fyke~--~DGv 95 (136)
T PF14781_consen 20 GKVFIHNPHERGQRTGRQDSDISFLNIN--QEITALAAGRLKPDDGRDCLLIGTQTSLLAYDVENNSDLFYKEV--PDGV 95 (136)
T ss_pred CEEEEECCCccccccccccCceeEEECC--CceEEEEEEecCCCCCcCEEEEeccceEEEEEcccCchhhhhhC--ccce
Confidence 389999877543 33333333 5677775 44332 5545555677999987654433344 5678
Q ss_pred eEEEEeC----CCCEEEEEeCCCeEEEEE
Q psy2083 117 NNLCHIP----ESGMMFIANENKKILTYY 141 (248)
Q Consensus 117 n~l~~~p----dsgll~sa~ed~~I~~w~ 141 (248)
|++.+-. ++.++++|+ ...|..|+
T Consensus 96 n~i~~g~~~~~~~~l~ivGG-ncsi~Gfd 123 (136)
T PF14781_consen 96 NAIVIGKLGDIPSPLVIVGG-NCSIQGFD 123 (136)
T ss_pred eEEEEEecCCCCCcEEEECc-eEEEEEeC
Confidence 8888732 334454444 66676665
No 405
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=64.73 E-value=1e+02 Score=32.15 Aligned_cols=63 Identities=16% Similarity=0.132 Sum_probs=41.5
Q ss_pred eeeecCCeeEEEEcCCCceeEEecCCCCCCee---------E----EE----EcCCc-eeee---C-------CCeEEEE
Q psy2083 46 ILTYYIPAFYLYDIRADKPLRVKDHMYGLPIR---------D----IK----FHDNY-VLSM---D-------SSVVKIW 97 (248)
Q Consensus 46 ~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~---------s----I~----F~~d~-l~Ss---d-------d~~IKIW 97 (248)
++++.||.+.-.|.+++++++.+... ..|. . +. ...+. |+++ | ++.|+-+
T Consensus 264 ~~~T~Dg~LiALDA~TGk~~W~fg~~--G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~ 341 (764)
T TIGR03074 264 ILPTSDARLIALDADTGKLCEDFGNN--GTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAF 341 (764)
T ss_pred EEecCCCeEEEEECCCCCEEEEecCC--CceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEE
Confidence 37777789999999999998876432 1111 0 01 11122 4432 2 5789999
Q ss_pred ECCCCCEEEEeec
Q psy2083 98 SKDNGSLFTCIES 110 (248)
Q Consensus 98 D~~tGk~~~tie~ 110 (248)
|.+||+.+-.+..
T Consensus 342 Da~TGkl~W~~~~ 354 (764)
T TIGR03074 342 DVNTGALVWAWDP 354 (764)
T ss_pred ECCCCcEeeEEec
Confidence 9999999888764
No 406
>KOG0882|consensus
Probab=64.58 E-value=24 Score=34.49 Aligned_cols=126 Identities=11% Similarity=-0.008 Sum_probs=74.0
Q ss_pred CCeeEEEEeCCCCcEEEeecC-ceeeeecCCeeEEEEcCCCcee-EEecCCCCCCeeEEE-EcCC----c--eeeeCCCe
Q psy2083 23 TQFNNLCHIPESGMMFIANEN-KKILTYYIPAFYLYDIRADKPL-RVKDHMYGLPIRDIK-FHDN----Y--VLSMDSSV 93 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d-~~~~~~~~G~V~LwDlRs~~pl-~~~~h~~~~pI~sI~-F~~d----~--l~Ssdd~~ 93 (248)
+.|-+++.+- +|+++.+.++ + ..+|+||+.+-..+ ..+.-. .|=..-. .++. . |...+++.
T Consensus 54 ~~I~sl~~S~-dg~L~~Sv~d~D-------hs~KvfDvEn~DminmiKL~~--lPg~a~wv~skGd~~s~IAVs~~~sg~ 123 (558)
T KOG0882|consen 54 GVILSLAVSY-DGWLFRSVEDPD-------HSVKVFDVENFDMINMIKLVD--LPGFAEWVTSKGDKISLIAVSLFKSGK 123 (558)
T ss_pred HHHHhhhccc-cceeEeeccCcc-------cceeEEEeeccchhhhccccc--CCCceEEecCCCCeeeeEEeecccCCC
Confidence 3444555444 5676655444 3 38999999875322 222111 1211111 1222 1 22347888
Q ss_pred EEEEECCCCC-EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccc-hhhhhhc
Q psy2083 94 VKIWSKDNGS-LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDN-LTEELEE 164 (248)
Q Consensus 94 IKIWD~~tGk-~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~-~tee~e~ 164 (248)
|-|.|...+- ...-+..=|.++|..+.+.|-+..+.+....|.|.-|-.+. --.|+++ +.=||-.
T Consensus 124 i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~------~~qfPr~~l~~~~K~ 190 (558)
T KOG0882|consen 124 IFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEG------PFQFPRTNLNFELKH 190 (558)
T ss_pred cEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCC------cccCccccccccccc
Confidence 9999987543 22222222589999999999999999999999999996432 1244544 5555554
No 407
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=64.49 E-value=14 Score=36.19 Aligned_cols=28 Identities=7% Similarity=0.330 Sum_probs=22.5
Q ss_pred CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe
Q psy2083 33 ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK 68 (248)
Q Consensus 33 ~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~ 68 (248)
+...+++.+.|+ ++|+||+.+++.+.+.
T Consensus 229 ~~~~l~tl~~D~--------~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 229 DDTFLFTLSRDH--------TLRIWSLETGQCLATI 256 (547)
T ss_dssp TTTEEEEEETTS--------EEEEEETTTTCEEEEE
T ss_pred CCCEEEEEeCCC--------eEEEEECCCCeEEEEe
Confidence 566777888875 9999999999886554
No 408
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=64.43 E-value=24 Score=32.86 Aligned_cols=56 Identities=7% Similarity=0.178 Sum_probs=36.0
Q ss_pred CeeEEEEcCCc---eee-----eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe
Q psy2083 75 PIRDIKFHDNY---VLS-----MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN 132 (248)
Q Consensus 75 pI~sI~F~~d~---l~S-----sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ 132 (248)
.+....++|++ +.+ ++..+|+|.|+++|+.+...-. .....+++|.+||..|+-..
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~--~~~~~~~~W~~d~~~~~y~~ 188 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIE--NPKFSSVSWSDDGKGFFYTR 188 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEE--EEESEEEEECTTSSEEEEEE
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccc--ccccceEEEeCCCCEEEEEE
Confidence 34467889987 223 2334799999999988764322 12233499999976554443
No 409
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=63.90 E-value=61 Score=28.89 Aligned_cols=115 Identities=14% Similarity=0.261 Sum_probs=65.4
Q ss_pred ccccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc---eeEEecCCCCCCeeEE
Q psy2083 3 AQELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK---PLRVKDHMYGLPIRDI 79 (248)
Q Consensus 3 ~~~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~---pl~~~~h~~~~pI~sI 79 (248)
|-.+|+++-+++..+.-. +.=+.++....+ ++.+.+.. ++..-|-.+-. -+.+.+.+ .||..+
T Consensus 113 af~~d~~t~~~lg~~~y~--GeGWgLt~d~~~--LimsdGsa--------tL~frdP~tfa~~~~v~VT~~g--~pv~~L 178 (262)
T COG3823 113 AFKYDADTLEELGRFSYE--GEGWGLTSDDKN--LIMSDGSA--------TLQFRDPKTFAELDTVQVTDDG--VPVSKL 178 (262)
T ss_pred eEEEChHHhhhhcccccC--CcceeeecCCcc--eEeeCCce--------EEEecCHHHhhhcceEEEEECC--eecccc
Confidence 344666666666655432 333555544322 44433332 67765554432 23444433 666554
Q ss_pred ---EEcCCceeee---CCCeEEEEECCCCCEEEEeec-----------CCCCCeeEEEEeCCCCEEEEEe
Q psy2083 80 ---KFHDNYVLSM---DSSVVKIWSKDNGSLFTCIES-----------GDQTQFNNLCHIPESGMMFIAN 132 (248)
Q Consensus 80 ---~F~~d~l~Ss---dd~~IKIWD~~tGk~~~tie~-----------~h~~~In~l~~~pdsgll~sa~ 132 (248)
.|-...+.+. +++++|| |+++|+.++.++. .|..-.|.+++.|+++.++..+
T Consensus 179 NELE~VdG~lyANVw~t~~I~rI-~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG 247 (262)
T COG3823 179 NELEWVDGELYANVWQTTRIARI-DPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG 247 (262)
T ss_pred cceeeeccEEEEeeeeecceEEE-cCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence 4544444442 5666665 8999999998874 1234678999999986555544
No 410
>KOG2377|consensus
Probab=62.37 E-value=41 Score=33.20 Aligned_cols=105 Identities=8% Similarity=0.131 Sum_probs=63.6
Q ss_pred CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCC---CCeeEEEEcCCc-eeeeCCCeEE
Q psy2083 20 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYG---LPIRDIKFHDNY-VLSMDSSVVK 95 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~---~pI~sI~F~~d~-l~Ssdd~~IK 95 (248)
.+.+.|-++.|++|+..++.--.+. +|.++......|.....|.+. ..|..-.|+.+. ++--.+.-|-
T Consensus 64 ~d~G~I~SIkFSlDnkilAVQR~~~--------~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s~e~A~i~~~G~e 135 (657)
T KOG2377|consen 64 DDKGEIKSIKFSLDNKILAVQRTSK--------TVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTEIAFITDQGIE 135 (657)
T ss_pred cCCCceeEEEeccCcceEEEEecCc--------eEEEEecCCCchhhHHHHHhccCcceeEEEEEecCeeEEEEecCCeE
Confidence 3456888899999877555444443 889888866666555433322 236666776654 3322222344
Q ss_pred EEECCC-CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC
Q psy2083 96 IWSKDN-GSLFTCIESGDQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 96 IWD~~t-Gk~~~tie~~h~~~In~l~~~pdsgll~sa~e 133 (248)
++-... -+.+..++. |...||...+.|+..+++.++.
T Consensus 136 ~y~v~pekrslRlVks-~~~nvnWy~yc~et~v~LL~t~ 173 (657)
T KOG2377|consen 136 FYQVLPEKRSLRLVKS-HNLNVNWYMYCPETAVILLSTT 173 (657)
T ss_pred EEEEchhhhhhhhhhh-cccCccEEEEccccceEeeecc
Confidence 444332 122334455 5789999999999988776654
No 411
>PRK13616 lipoprotein LpqB; Provisional
Probab=61.41 E-value=83 Score=31.71 Aligned_cols=111 Identities=7% Similarity=0.001 Sum_probs=57.4
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc--eeee-CC-CeEEEEE
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY--VLSM-DS-SVVKIWS 98 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~--l~Ss-dd-~~IKIWD 98 (248)
.+.+...+|++..++..........-....+.+++.-.. +++. .+ .....-.|+|++ |... +. ..+.+.+
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt---~g--~~~t~PsWspDG~~lw~v~dg~~~~~v~~ 425 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVL---EG--HSLTRPSWSLDADAVWVVVDGNTVVRVIR 425 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeee---cC--CCCCCceECCCCCceEEEecCcceEEEec
Confidence 566778888777655443100000001236777776332 2321 12 236778899985 3332 32 3444444
Q ss_pred CCC-CCEEE-EeecC-----CCCCeeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 99 KDN-GSLFT-CIESG-----DQTQFNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 99 ~~t-Gk~~~-tie~~-----h~~~In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
... ++... .+.++ ....|.++.|+|||..|+.-. +++|.+=
T Consensus 426 ~~~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~-~g~v~Va 473 (591)
T PRK13616 426 DPATGQLARTPVDASAVASRVPGPISELQLSRDGVRAAMII-GGKVYLA 473 (591)
T ss_pred cCCCceEEEEeccCchhhhccCCCcCeEEECCCCCEEEEEE-CCEEEEE
Confidence 322 22210 11110 034799999999998877766 4666553
No 412
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=60.56 E-value=18 Score=20.96 Aligned_cols=27 Identities=15% Similarity=0.416 Sum_probs=19.6
Q ss_pred CCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe
Q psy2083 34 SGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK 68 (248)
Q Consensus 34 ~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~ 68 (248)
+|.+++++.+ |.+.-+|.++++.++..
T Consensus 6 ~~~v~~~~~~--------g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 6 DGTVYVGSTD--------GTLYALDAKTGEILWTY 32 (33)
T ss_pred CCEEEEEcCC--------CEEEEEEcccCcEEEEc
Confidence 3456666555 48999999999887753
No 413
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=60.34 E-value=1e+02 Score=31.89 Aligned_cols=69 Identities=9% Similarity=0.303 Sum_probs=44.2
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC----------CCce-eEEe---------cCCCCCCeeEEEEcC
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR----------ADKP-LRVK---------DHMYGLPIRDIKFHD 83 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR----------s~~p-l~~~---------~h~~~~pI~sI~F~~ 83 (248)
.|..+..+|.+.+++.+|..+ |-+-.+- .++. +..+ .-..+..|..+.|||
T Consensus 86 ~v~~i~~n~~g~~lal~G~~~---------v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP 156 (717)
T PF10168_consen 86 EVHQISLNPTGSLLALVGPRG---------VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHP 156 (717)
T ss_pred eEEEEEECCCCCEEEEEcCCc---------EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcC
Confidence 678888888777788877764 3333331 1111 1111 112346899999999
Q ss_pred Cc------eeeeCCCeEEEEECCC
Q psy2083 84 NY------VLSMDSSVVKIWSKDN 101 (248)
Q Consensus 84 d~------l~Ssdd~~IKIWD~~t 101 (248)
.+ ++=..|+++|+||...
T Consensus 157 ~s~~~~~l~vLtsdn~lR~y~~~~ 180 (717)
T PF10168_consen 157 WSESDSHLVVLTSDNTLRLYDISD 180 (717)
T ss_pred CCCCCCeEEEEecCCEEEEEecCC
Confidence 74 4446788999999975
No 414
>KOG1897|consensus
Probab=59.93 E-value=1.7e+02 Score=31.54 Aligned_cols=115 Identities=5% Similarity=-0.005 Sum_probs=72.8
Q ss_pred CeeEEEEeCCCCcEEEeecCcee---eeecCCeeEEEEcCCCceeE-EecCCCCCCeeEEEEcCCceeeeCCCeEEEEEC
Q psy2083 24 QFNNLCHIPESGMMFIANENKKI---LTYYIPAFYLYDIRADKPLR-VKDHMYGLPIRDIKFHDNYVLSMDSSVVKIWSK 99 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~---~~~~~G~V~LwDlRs~~pl~-~~~h~~~~pI~sI~F~~d~l~Ssdd~~IKIWD~ 99 (248)
.+.++.|-+|.+..+++|..-.. ...-.|.|-+|.....+.+. +-.+.-.+.+.++.--.+.++++-..+|+|++.
T Consensus 776 Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~fngkllA~In~~vrLye~ 855 (1096)
T KOG1897|consen 776 SIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEFNGKLLAGINQSVRLYEW 855 (1096)
T ss_pred eeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhhCCeEEEecCcEEEEEEc
Confidence 34555577764554444432100 11234678888877733332 223333355555544444488888889999999
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEE
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILT 139 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~ 139 (248)
.+++.+..-.. +..++--+.+.-.|..|++|.--+.+.+
T Consensus 856 t~~~eLr~e~~-~~~~~~aL~l~v~gdeI~VgDlm~Sitl 894 (1096)
T KOG1897|consen 856 TTERELRIECN-ISNPIIALDLQVKGDEIAVGDLMRSITL 894 (1096)
T ss_pred cccceehhhhc-ccCCeEEEEEEecCcEEEEeeccceEEE
Confidence 99877766554 4677777788889999999987777754
No 415
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=59.84 E-value=35 Score=35.26 Aligned_cols=71 Identities=15% Similarity=0.258 Sum_probs=44.0
Q ss_pred CCeeEEEEe--CCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--------eeeeC-C
Q psy2083 23 TQFNNLCHI--PESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--------VLSMD-S 91 (248)
Q Consensus 23 ~~V~~~~~~--~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--------l~Ssd-d 91 (248)
..++++++. ....++++++...+| +|--+++...+.....+|.+...|.+|+|.++. |+++| .
T Consensus 164 ~SaWGLdIh~~~~~rlIAVSsNs~~V------TVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~ 237 (717)
T PF08728_consen 164 ASAWGLDIHDYKKSRLIAVSSNSQEV------TVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDIS 237 (717)
T ss_pred CceeEEEEEecCcceEEEEecCCceE------EEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEecc
Confidence 467899988 655555554444444 566666644443344466667889999998652 44444 6
Q ss_pred CeEEEEEC
Q psy2083 92 SVVKIWSK 99 (248)
Q Consensus 92 ~~IKIWD~ 99 (248)
|.+-+|+.
T Consensus 238 G~v~~~~I 245 (717)
T PF08728_consen 238 GEVWTFKI 245 (717)
T ss_pred CcEEEEEE
Confidence 76656555
No 416
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=59.73 E-value=1.6e+02 Score=30.49 Aligned_cols=70 Identities=20% Similarity=0.296 Sum_probs=46.0
Q ss_pred CCCCeeEEEEc---CC---c---eeeeCCCeEEEEECCC---------------CCEEEEeec---CCCCCeeEEEEeC-
Q psy2083 72 YGLPIRDIKFH---DN---Y---VLSMDSSVVKIWSKDN---------------GSLFTCIES---GDQTQFNNLCHIP- 123 (248)
Q Consensus 72 ~~~pI~sI~F~---~d---~---l~Ssdd~~IKIWD~~t---------------Gk~~~tie~---~h~~~In~l~~~p- 123 (248)
.+.||..|+|. .. . ++---...+-|..+.- -.++.+|.. + ..+..+|||+|
T Consensus 78 ~~~PI~qI~fa~~~~~~~~~~~~l~Vrt~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tg-g~~~aDv~FnP~ 156 (765)
T PF10214_consen 78 DGSPIKQIKFATLSESFDEKSRWLAVRTETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTG-GFPHADVAFNPW 156 (765)
T ss_pred CCCCeeEEEecccccccCCcCcEEEEEcCCEEEEEEcccccccccccCCccccccceeEEechhhcC-CCccceEEeccC
Confidence 35899999998 21 1 2222333444554111 134555542 1 45788999999
Q ss_pred CCCEEEEEeCCCeEEEEEc
Q psy2083 124 ESGMMFIANENKKILTYYI 142 (248)
Q Consensus 124 dsgll~sa~ed~~I~~w~I 142 (248)
+.+.|++..+.|.-.+|+|
T Consensus 157 ~~~q~AiVD~~G~Wsvw~i 175 (765)
T PF10214_consen 157 DQRQFAIVDEKGNWSVWDI 175 (765)
T ss_pred ccceEEEEeccCcEEEEEe
Confidence 4478999999999999999
No 417
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=59.34 E-value=28 Score=20.06 Aligned_cols=25 Identities=4% Similarity=0.179 Sum_probs=18.7
Q ss_pred eeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 116 FNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 116 In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
.+++|+.++|.++++=+...+|++|
T Consensus 4 P~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 4 PHGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred CcEEEEeCCCCEEEEECCCCEEEEC
Confidence 4678999888777776777777765
No 418
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=59.02 E-value=30 Score=26.07 Aligned_cols=51 Identities=12% Similarity=0.257 Sum_probs=35.0
Q ss_pred CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEE-eCCCeEEEEEc
Q psy2083 90 DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIA-NENKKILTYYI 142 (248)
Q Consensus 90 dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa-~ed~~I~~w~I 142 (248)
.++.+=-||+.+++.-.-+++ -.-.|.|+++||+..++++ .-..+|.=|.+
T Consensus 35 ~~GRll~ydp~t~~~~vl~~~--L~fpNGVals~d~~~vlv~Et~~~Ri~rywl 86 (89)
T PF03088_consen 35 PTGRLLRYDPSTKETTVLLDG--LYFPNGVALSPDESFVLVAETGRYRILRYWL 86 (89)
T ss_dssp --EEEEEEETTTTEEEEEEEE--ESSEEEEEE-TTSSEEEEEEGGGTEEEEEES
T ss_pred CCcCEEEEECCCCeEEEehhC--CCccCeEEEcCCCCEEEEEeccCceEEEEEE
Confidence 466677899999887666665 6678999999999876665 34456655544
No 419
>KOG2377|consensus
Probab=57.93 E-value=1.1e+02 Score=30.40 Aligned_cols=47 Identities=17% Similarity=0.027 Sum_probs=30.4
Q ss_pred eEEEEcCCCce--eEEecCCCCCCeeEEEEcCCc-eeee--CCCeEEEEECC
Q psy2083 54 FYLYDIRADKP--LRVKDHMYGLPIRDIKFHDNY-VLSM--DSSVVKIWSKD 100 (248)
Q Consensus 54 V~LwDlRs~~p--l~~~~h~~~~pI~sI~F~~d~-l~Ss--dd~~IKIWD~~ 100 (248)
+-=|-+..+.| ...++....+||.+|.|++|. +++- .+++|.+.+..
T Consensus 45 atgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~ 96 (657)
T KOG2377|consen 45 ATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFI 96 (657)
T ss_pred eeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecC
Confidence 45566655433 122333334699999999998 5543 68889888873
No 420
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=57.50 E-value=1.5e+02 Score=27.02 Aligned_cols=111 Identities=18% Similarity=0.301 Sum_probs=62.2
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC----CceeEEec-----CCCCCCe-------eEEEEcCCc
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA----DKPLRVKD-----HMYGLPI-------RDIKFHDNY 85 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs----~~pl~~~~-----h~~~~pI-------~sI~F~~d~ 85 (248)
-+....+.+.++++.+++.++++. ......+..+++.. ...+.... ...+.+. -+|++.+++
T Consensus 19 ~GGlSgl~~~~~~~~~~avSD~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g 96 (326)
T PF13449_consen 19 FGGLSGLDYDPDDGRFYAVSDRGP--NKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDG 96 (326)
T ss_pred cCcEeeEEEeCCCCEEEEEECCCC--CCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCC
Confidence 356778888876776667666641 00011144444443 11111110 1112333 377886665
Q ss_pred --eeeeC-C------CeEEEEECCCCCEEEEee-cC-------------CCCCeeEEEEeCCCCEEEEEeCCC
Q psy2083 86 --VLSMD-S------SVVKIWSKDNGSLFTCIE-SG-------------DQTQFNNLCHIPESGMMFIANENK 135 (248)
Q Consensus 86 --l~Ssd-d------~~IKIWD~~tGk~~~tie-~~-------------h~~~In~l~~~pdsgll~sa~ed~ 135 (248)
.+|.. + ..|.-.|.+ |+....+. |. ....+-.++++|||..|+++.|..
T Consensus 97 ~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~ 168 (326)
T PF13449_consen 97 SFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESP 168 (326)
T ss_pred CEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECcc
Confidence 55553 4 567778877 88766662 20 123456899999999888887765
No 421
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=56.61 E-value=83 Score=23.65 Aligned_cols=46 Identities=9% Similarity=0.188 Sum_probs=28.6
Q ss_pred cCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eee--eCCCeEEEE
Q psy2083 50 YIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLS--MDSSVVKIW 97 (248)
Q Consensus 50 ~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~S--sdd~~IKIW 97 (248)
.+|.+.-||.++++--...+-- .-=|.|++++|+ +++ ...++.|.|
T Consensus 35 ~~GRll~ydp~t~~~~vl~~~L--~fpNGVals~d~~~vlv~Et~~~Ri~ryw 85 (89)
T PF03088_consen 35 PTGRLLRYDPSTKETTVLLDGL--YFPNGVALSPDESFVLVAETGRYRILRYW 85 (89)
T ss_dssp --EEEEEEETTTTEEEEEEEEE--SSEEEEEE-TTSSEEEEEEGGGTEEEEEE
T ss_pred CCcCEEEEECCCCeEEEehhCC--CccCeEEEcCCCCEEEEEeccCceEEEEE
Confidence 3579999999998642222211 123899999997 333 357788888
No 422
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=55.92 E-value=84 Score=29.42 Aligned_cols=71 Identities=10% Similarity=0.187 Sum_probs=45.5
Q ss_pred eEEEEcCCc---eeeeCCCeEEEEECC------CC-CEEEEeec--C--CCCCeeEEEEeCCCC------------EEEE
Q psy2083 77 RDIKFHDNY---VLSMDSSVVKIWSKD------NG-SLFTCIES--G--DQTQFNNLCHIPESG------------MMFI 130 (248)
Q Consensus 77 ~sI~F~~d~---l~Ssdd~~IKIWD~~------tG-k~~~tie~--~--h~~~In~l~~~pdsg------------ll~s 130 (248)
..|+|+|.+ |+....+...++|.. .. .++-++.. + .++..+.+.|+..++ .++.
T Consensus 26 WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fif 105 (336)
T TIGR03118 26 WGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFLF 105 (336)
T ss_pred ceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEEE
Confidence 468899876 555567788899986 22 23444441 0 134566666664333 3678
Q ss_pred EeCCCeEEEEEcCCCCCC
Q psy2083 131 ANENKKILTYYIPSLGPA 148 (248)
Q Consensus 131 a~ed~~I~~w~Ip~lG~a 148 (248)
++||++|..|- |.++|.
T Consensus 106 ~tEdGTisaW~-p~v~~t 122 (336)
T TIGR03118 106 VTEDGTLSGWA-PALGTT 122 (336)
T ss_pred EeCCceEEeec-CcCCcc
Confidence 89999999996 555554
No 423
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=55.29 E-value=2e+02 Score=27.57 Aligned_cols=193 Identities=16% Similarity=0.200 Sum_probs=96.3
Q ss_pred cCceeEEEecCCCCCeeEEEE-eCCCCc---EEEeecCceeeeecCCeeEEEEcCCC-ceeEEec-CCC----C-CCeeE
Q psy2083 10 KGSLFTCIESGDQTQFNNLCH-IPESGM---MFIANENKKILTYYIPAFYLYDIRAD-KPLRVKD-HMY----G-LPIRD 78 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~-~~~~g~---l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~-h~~----~-~pI~s 78 (248)
.|++++.++.+...+| ++.+ |+-+|. +++++.-.. ..-+|++|-|-.. ..+.... ... + ..+..
T Consensus 86 ~Gk~lq~~~~Gr~NNV-Dvrygf~l~g~~vDlavas~R~~----g~n~l~~f~id~~~g~L~~v~~~~~p~~~~~~e~yG 160 (381)
T PF02333_consen 86 DGKELQSLPVGRPNNV-DVRYGFPLNGKTVDLAVASDRSD----GRNSLRLFRIDPDTGELTDVTDPAAPIATDLSEPYG 160 (381)
T ss_dssp TS-EEEEE-SS-EEEE-EEEEEEEETTEEEEEEEEEE-CC----CT-EEEEEEEETTTTEEEE-CBTTC-EE-SSSSEEE
T ss_pred CCcEEEeecCCCccee-eeecceecCCceEEEEEEecCcC----CCCeEEEEEecCCCCcceEcCCCCccccccccccee
Confidence 6888888876522222 3333 332333 334433210 0026999977532 2333221 110 0 12566
Q ss_pred EEEc--CC-c----eeeeCCCeE---EEEECCCC----CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 79 IKFH--DN-Y----VLSMDSSVV---KIWSKDNG----SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 79 I~F~--~d-~----l~Ssdd~~I---KIWD~~tG----k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+|+- +. + +++..++.+ +|++..+| +.+..|.. .+.+-.|.+....+.|+.|-|+.=|+-|+.-.
T Consensus 161 lcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~--~sQ~EGCVVDDe~g~LYvgEE~~GIW~y~Aep 238 (381)
T PF02333_consen 161 LCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKV--GSQPEGCVVDDETGRLYVGEEDVGIWRYDAEP 238 (381)
T ss_dssp EEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE---SS-EEEEEEETTTTEEEEEETTTEEEEEESSC
T ss_pred eEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecC--CCcceEEEEecccCCEEEecCccEEEEEecCC
Confidence 7763 32 2 455566644 55555555 46778887 67888899999999999999998888887643
Q ss_pred C-CCCCCccccc--cchhhhhhcccccccc-----CCceeecHhHHhhcCCcc------cc-------------------
Q psy2083 145 L-GPAPKWCGFL--DNLTEELEENIIENVY-----DDYKFVTRQELEDLGLGH------LI------------------- 191 (248)
Q Consensus 145 l-G~aP~wcs~l--d~~tee~e~~~~~~~y-----d~y~fvt~~~l~~l~~~~------li------------------- 191 (248)
- +..|.=-... +.|+.+.| .-++| .+|-+|+.+.-....+.. .+
T Consensus 239 ~~~~~~~~v~~~~g~~l~aDvE---Glaly~~~~g~gYLivSsQG~~sf~Vy~r~~~~~~~g~f~i~~~~~idg~~eTDG 315 (381)
T PF02333_consen 239 EGGNDRTLVASADGDGLVADVE---GLALYYGSDGKGYLIVSSQGDNSFAVYDREGPNAYVGSFRIGDGGGIDGVSETDG 315 (381)
T ss_dssp CC-S--EEEEEBSSSSB-S-EE---EEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT--EEEEEEEE--SSS----S---
T ss_pred CCCCcceeeecccccccccCcc---ceEEEecCCCCeEEEEEcCCCCeEEEEecCCCCcccceEEeccCCCccccccCCc
Confidence 2 3333211111 23555555 34444 247777766554443311 11
Q ss_pred ----CCCcccccceeeeechhhHHH
Q psy2083 192 ----GTSLLRAYMHGFFMDIRLYRK 212 (248)
Q Consensus 192 ----gt~~l~~ymhgyf~~~~ly~~ 212 (248)
..++=.+|-+|-||-+.=+|.
T Consensus 316 ~~v~s~~lG~~fp~Gl~VvqDg~n~ 340 (381)
T PF02333_consen 316 IEVVSVPLGPAFPQGLFVVQDGRNI 340 (381)
T ss_dssp EEEE-S--STT-TT-EEEEEESSEE
T ss_pred ceEEcCcCCCCCCCceEEEecCCcC
Confidence 125556788999988877763
No 424
>KOG4305|consensus
Probab=54.42 E-value=96 Score=33.41 Aligned_cols=38 Identities=18% Similarity=0.288 Sum_probs=31.6
Q ss_pred CCCCeeEEEEcCCceeeeCCCeEEEEECCCCCEEEEeec
Q psy2083 72 YGLPIRDIKFHDNYVLSMDSSVVKIWSKDNGSLFTCIES 110 (248)
Q Consensus 72 ~~~pI~sI~F~~d~l~Ssdd~~IKIWD~~tGk~~~tie~ 110 (248)
.|.|.....++| .|++=+++-|-|||++||+.+..+.+
T Consensus 952 ~g~p~~~a~~~~-yiia~~~~fIeI~~~~t~eli~~i~~ 989 (1029)
T KOG4305|consen 952 EGEPQEFALSYP-YIIAFGDNFIEIRDLETGELIQIILG 989 (1029)
T ss_pred cCccceeeeecc-eEEEecCceEEEEecccceeeEEeec
Confidence 346777777776 67778999999999999999998877
No 425
>KOG1920|consensus
Probab=54.14 E-value=72 Score=34.78 Aligned_cols=61 Identities=8% Similarity=0.157 Sum_probs=44.5
Q ss_pred CCeeEEEEcCCc---eeeeCCCeEEEEECCCCCE--EEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEE
Q psy2083 74 LPIRDIKFHDNY---VLSMDSSVVKIWSKDNGSL--FTCIESGDQTQFNNLCHIPESGMMFIANENKKIL 138 (248)
Q Consensus 74 ~pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~--~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~ 138 (248)
..|.++.|..+. +++..+|.|-+-|+++... +.++ ...|-+++|+||..+++.+..+.++.
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg~v----d~GI~aaswS~Dee~l~liT~~~tll 134 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLELEIVGNV----DNGISAASWSPDEELLALITGRQTLL 134 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEcccccceeeeeec----cCceEEEeecCCCcEEEEEeCCcEEE
Confidence 489999999876 3444455555668887643 2222 35799999999999999998877764
No 426
>KOG4460|consensus
Probab=54.14 E-value=1.2e+02 Score=30.53 Aligned_cols=71 Identities=13% Similarity=0.221 Sum_probs=42.5
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEc----------CCCceeEE----------ecCCCCCCeeEEEEcC
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDI----------RADKPLRV----------KDHMYGLPIRDIKFHD 83 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDl----------Rs~~pl~~----------~~h~~~~pI~sI~F~~ 83 (248)
.|..+..++.|..++.+|.++ |.+..+ ..++|..+ +.......+..++|||
T Consensus 105 eV~~vl~s~~GS~VaL~G~~G---------i~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP 175 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKG---------LMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHP 175 (741)
T ss_pred EEEEEEecCCCceEEEecCCe---------eEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccC
Confidence 355666677777777777775 233233 22344321 1111124677889999
Q ss_pred Cc------eeeeCCCeEEEEECCCCC
Q psy2083 84 NY------VLSMDSSVVKIWSKDNGS 103 (248)
Q Consensus 84 d~------l~Ssdd~~IKIWD~~tGk 103 (248)
+. ++=+.|++|||+|...-.
T Consensus 176 ~S~~D~hL~iL~sdnviRiy~lS~~t 201 (741)
T KOG4460|consen 176 SSILDPHLVLLTSDNVIRIYSLSEPT 201 (741)
T ss_pred CccCCceEEEEecCcEEEEEecCCcc
Confidence 85 444678899999987533
No 427
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=52.83 E-value=1.9e+02 Score=26.63 Aligned_cols=100 Identities=10% Similarity=0.184 Sum_probs=49.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC--ceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD--KPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWS 98 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~--~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD 98 (248)
+.++++...+++. +++++..+. -.+-||--.. .|.... -...|.++.|.|++ .+.+..+.|+.=|
T Consensus 145 gs~~~~~r~~dG~-~vavs~~G~-------~~~s~~~G~~~w~~~~r~---~~~riq~~gf~~~~~lw~~~~Gg~~~~s~ 213 (302)
T PF14870_consen 145 GSINDITRSSDGR-YVAVSSRGN-------FYSSWDPGQTTWQPHNRN---SSRRIQSMGFSPDGNLWMLARGGQIQFSD 213 (302)
T ss_dssp --EEEEEE-TTS--EEEEETTSS-------EEEEE-TT-SS-EEEE-----SSS-EEEEEE-TTS-EEEEETTTEEEEEE
T ss_pred ceeEeEEECCCCc-EEEEECccc-------EEEEecCCCccceEEccC---ccceehhceecCCCCEEEEeCCcEEEEcc
Confidence 3556666666544 444445442 3456665332 332222 23689999999997 3456777888876
Q ss_pred -CCCCCEEEE----eecCCCCCeeEEEEeCCCCEEEEEeCC
Q psy2083 99 -KDNGSLFTC----IESGDQTQFNNLCHIPESGMMFIANEN 134 (248)
Q Consensus 99 -~~tGk~~~t----ie~~h~~~In~l~~~pdsgll~sa~ed 134 (248)
...++.+.. +..+ ...+-++++.|+..+.++|+..
T Consensus 214 ~~~~~~~w~~~~~~~~~~-~~~~ld~a~~~~~~~wa~gg~G 253 (302)
T PF14870_consen 214 DPDDGETWSEPIIPIKTN-GYGILDLAYRPPNEIWAVGGSG 253 (302)
T ss_dssp -TTEEEEE---B-TTSS---S-EEEEEESSSS-EEEEESTT
T ss_pred CCCCccccccccCCcccC-ceeeEEEEecCCCCEEEEeCCc
Confidence 333333322 1111 2357889999887666655544
No 428
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=50.39 E-value=1.9e+02 Score=26.85 Aligned_cols=109 Identities=9% Similarity=0.087 Sum_probs=56.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCc-ee-ee--ecCC-eeEEEEcCC--Ccee--EEecCCCCCCeeEEEEcCCc-eeeeCCC
Q psy2083 23 TQFNNLCHIPESGMMFIANENK-KI-LT--YYIP-AFYLYDIRA--DKPL--RVKDHMYGLPIRDIKFHDNY-VLSMDSS 92 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~-~~-~~--~~~G-~V~LwDlRs--~~pl--~~~~h~~~~pI~sI~F~~d~-l~Ssdd~ 92 (248)
.....+++.+++ .++++...+ .- .+ .-.| .|.+.+-.. ++.- .++..+. ...+.++|.+++ ++++..+
T Consensus 14 ~~P~~ia~d~~G-~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l-~~p~Gi~~~~~GlyV~~~~~ 91 (367)
T TIGR02604 14 RNPIAVCFDERG-RLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEEL-SMVTGLAVAVGGVYVATPPD 91 (367)
T ss_pred CCCceeeECCCC-CEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCC-CCccceeEecCCEEEeCCCe
Confidence 345677777754 455543210 00 00 0012 576666543 3321 2222221 234789999888 5555566
Q ss_pred eEEEEECCC-C----C--EE-EEeecC---CCCCeeEEEEeCCCCEEEEEeC
Q psy2083 93 VVKIWSKDN-G----S--LF-TCIESG---DQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 93 ~IKIWD~~t-G----k--~~-~tie~~---h~~~In~l~~~pdsgll~sa~e 133 (248)
+.++.|.+. | + .+ ..+... +....+.+++.|||.+.++-+.
T Consensus 92 i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~ 143 (367)
T TIGR02604 92 ILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGN 143 (367)
T ss_pred EEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEeccc
Confidence 666767642 1 2 12 223221 1245889999999988776663
No 429
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=49.61 E-value=3.1e+02 Score=28.31 Aligned_cols=113 Identities=16% Similarity=0.270 Sum_probs=60.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc----eeEEecCC----CCCCeeEEEEc--CCc--eeee-
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK----PLRVKDHM----YGLPIRDIKFH--DNY--VLSM- 89 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~----pl~~~~h~----~~~pI~sI~F~--~d~--l~Ss- 89 (248)
+.|+.+.|++++..+++.-.+ |.|.+||...+. |.....+. |..-|+...+- .+. +++.
T Consensus 130 ~kvv~Ik~~~~~~~I~vvl~n--------G~i~~~d~~~~~l~~~~~l~~~~~~~v~ys~fv~~~~~~~~~~~ll~v~~~ 201 (670)
T PF10395_consen 130 DKVVGIKFSSDGKIIYVVLEN--------GSIQIYDFSENSLEKVPQLKLKSSINVSYSKFVNDFELENGKDLLLTVSQL 201 (670)
T ss_pred cceEEEEEecCCCEEEEEEcC--------CcEEEEeccccccccccccccccccceehhhhhcccccccCCceEEEEEEc
Confidence 478899998766666666555 499999993321 10111111 11111111110 122 4443
Q ss_pred -CC-CeEEEEECC-CCCEEEEee---cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 90 -DS-SVVKIWSKD-NGSLFTCIE---SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 90 -dd-~~IKIWD~~-tGk~~~tie---~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
++ -+.|+.... ++.....+. . +.....+..|.-+.|.|.-= .+.+|.+|.||.+
T Consensus 202 ~~~k~~ykL~~l~~~~~~~~El~s~~~-e~~~~~~s~f~Y~~G~LY~l-~~~~i~~ysip~f 261 (670)
T PF10395_consen 202 SNSKLSYKLISLSNESSSIFELSSTIL-ENFGLEDSKFCYQFGKLYQL-SKKTISSYSIPNF 261 (670)
T ss_pred CCCcEEEEEEEeccCCcceEEeehhee-ccCCcccceEEEeCCEEEEE-eCCEEEEEEcCCc
Confidence 23 378888881 122222222 1 13445556666666666555 7889999999985
No 430
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=48.94 E-value=2.2e+02 Score=28.74 Aligned_cols=130 Identities=8% Similarity=0.100 Sum_probs=71.9
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc-eeEEe-cCCCCCCeeEEEEc
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK-PLRVK-DHMYGLPIRDIKFH 82 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~-pl~~~-~h~~~~pI~sI~F~ 82 (248)
++|...|+.+..-.-+ ..| -+.|-|....--.+. ..-+.|-++-.|---|-|... .+.+- .. ..++.=.|+
T Consensus 494 kmDIErGkvveeW~~~--ddv-vVqy~p~~kf~qmt~-eqtlvGlS~~svFrIDPR~~gNKi~v~esK---dY~tKn~Fs 566 (776)
T COG5167 494 KMDIERGKVVEEWDLK--DDV-VVQYNPYFKFQQMTD-EQTLVGLSDYSVFRIDPRARGNKIKVVESK---DYKTKNKFS 566 (776)
T ss_pred eeecccceeeeEeecC--Ccc-eeecCCchhHHhcCc-cceEEeecccceEEecccccCCceeeeeeh---hcccccccc
Confidence 4677788888887766 333 455555322100000 111122233356666887642 22221 11 223344444
Q ss_pred -----CCc--eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 83 -----DNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 83 -----~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
.++ +++|..|-||++|.-.-...+.+.+ -...|-.+....+|..|++.|. ..+.+-++|
T Consensus 567 s~~tTesGyIa~as~kGDirLyDRig~rAKtalP~-lG~aIk~idvta~Gk~ilaTCk-~yllL~d~~ 632 (776)
T COG5167 567 SGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPG-LGDAIKHIDVTANGKHILATCK-NYLLLTDVP 632 (776)
T ss_pred ccccccCceEEEecCCCceeeehhhcchhhhcCcc-cccceeeeEeecCCcEEEEeec-ceEEEEecc
Confidence 344 4557889999999763333333433 2467888999999999888885 445555554
No 431
>KOG1896|consensus
Probab=48.71 E-value=2.5e+02 Score=31.01 Aligned_cols=106 Identities=11% Similarity=0.304 Sum_probs=57.2
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEc-CCCc--eeEEecCCCCCCeeEEEEcCCceeeeC-CCeEEE-
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDI-RADK--PLRVKDHMYGLPIRDIKFHDNYVLSMD-SSVVKI- 96 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDl-Rs~~--pl~~~~h~~~~pI~sI~F~~d~l~Ssd-d~~IKI- 96 (248)
++.|..+|-- .|.++++.+. +|.||++ |.+. |+...|-+ ..|.++.--.+.|+.+| -+.|.+
T Consensus 1097 KGtVsavceV--~G~l~~~~Gq---------KI~v~~l~r~~~ligVaFiD~~--~yv~s~~~vknlIl~gDV~ksisfl 1163 (1366)
T KOG1896|consen 1097 KGTVSAVCEV--RGHLLSSQGQ---------KIIVRKLDRDSELIGVAFIDLP--LYVHSMKVVKNLILAGDVMKSISFL 1163 (1366)
T ss_pred ccceEEEEEe--ccEEEEccCc---------EEEEEEeccCCcceeeEEeccc--eeEEehhhhhhheehhhhhhceEEE
Confidence 4566666654 5778887777 6999999 6653 33333321 23333332233355555 344444
Q ss_pred -EECCCCCEEEEeecCCCC--CeeEEEEeCCCC-E-EEEEeCCCeEEEEEc
Q psy2083 97 -WSKDNGSLFTCIESGDQT--QFNNLCHIPESG-M-MFIANENKKILTYYI 142 (248)
Q Consensus 97 -WD~~tGk~~~tie~~h~~--~In~l~~~pdsg-l-l~sa~ed~~I~~w~I 142 (248)
|+.+ +..+..+.- +.. .+.++.|--||+ + ++++..+++|++|.-
T Consensus 1164 ~fqee-p~rlsL~sr-d~~~l~v~s~EFLVdg~~L~flvsDa~rNi~vy~Y 1212 (1366)
T KOG1896|consen 1164 GFQEE-PYRLSLLSR-DFEPLNVYSTEFLVDGSNLSFLVSDADRNIHVYMY 1212 (1366)
T ss_pred EEccC-ceEEEEeec-CCchhhceeeeeEEcCCeeEEEEEcCCCcEEEEEe
Confidence 5554 333444432 122 455666655553 4 445556799998853
No 432
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=48.33 E-value=68 Score=33.24 Aligned_cols=64 Identities=13% Similarity=0.210 Sum_probs=43.5
Q ss_pred eeeeCCCeEEEEECCCCCEEEEe----ec----------C----CCCCeeEEEEeCCCCEEEEEeCCCeEE--EEEcCCC
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFTCI----ES----------G----DQTQFNNLCHIPESGMMFIANENKKIL--TYYIPSL 145 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~ti----e~----------~----h~~~In~l~~~pdsgll~sa~ed~~I~--~w~Ip~l 145 (248)
+++-+||+|.+.|..|-+.+... ++ + ...++-.++|+|++..++.-..+++++ .+-.+..
T Consensus 275 ~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~~~~~~~~~~~~~~~~~ 354 (753)
T PF11635_consen 275 AFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQIDEDGKTKKLLYMMRDS 354 (753)
T ss_pred EEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEEecCCCceeeEEeecCC
Confidence 44558999999999886555444 21 0 011334689999999999999999877 5555555
Q ss_pred CCCC
Q psy2083 146 GPAP 149 (248)
Q Consensus 146 G~aP 149 (248)
|..|
T Consensus 355 ~~~~ 358 (753)
T PF11635_consen 355 GSSP 358 (753)
T ss_pred CCCc
Confidence 5444
No 433
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=48.06 E-value=2.4e+02 Score=26.42 Aligned_cols=77 Identities=13% Similarity=0.302 Sum_probs=47.3
Q ss_pred eEEEEcCCCc-eeEEe----cCCCCCCeeEEEEcCCc--eeee------CCCeEEEEECCCC-CEEEEeecCCCCCeeEE
Q psy2083 54 FYLYDIRADK-PLRVK----DHMYGLPIRDIKFHDNY--VLSM------DSSVVKIWSKDNG-SLFTCIESGDQTQFNNL 119 (248)
Q Consensus 54 V~LwDlRs~~-pl~~~----~h~~~~pI~sI~F~~d~--l~Ss------dd~~IKIWD~~tG-k~~~tie~~h~~~In~l 119 (248)
-.++|....+ |+... -|-|+.. .||||+ +..+ ..+.|-|||.+.+ .-+..+.. |.-....+
T Consensus 93 ~~vfD~~~~~~pv~~~s~~~RHfyGHG----vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t-~GiGpHev 167 (366)
T COG3490 93 AMVFDPNGAQEPVTLVSQEGRHFYGHG----VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFST-HGIGPHEV 167 (366)
T ss_pred EEEECCCCCcCcEEEecccCceeeccc----ccCCCCcEEEeecCCCCCCCceEEEEecccccceeccccc-CCcCccee
Confidence 4677777653 33221 1333322 489998 4333 2579999999843 22233444 34556688
Q ss_pred EEeCCCCEEEEEeCCC
Q psy2083 120 CHIPESGMMFIANENK 135 (248)
Q Consensus 120 ~~~pdsgll~sa~ed~ 135 (248)
.+.+||.+|+.++-.-
T Consensus 168 ~lm~DGrtlvvanGGI 183 (366)
T COG3490 168 TLMADGRTLVVANGGI 183 (366)
T ss_pred EEecCCcEEEEeCCce
Confidence 9999999999988543
No 434
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=47.59 E-value=2.3e+02 Score=26.02 Aligned_cols=122 Identities=13% Similarity=0.145 Sum_probs=61.4
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc--eeEEe---cCCCCCCeeEEEEcCC----c---eeeeCC-
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK--PLRVK---DHMYGLPIRDIKFHDN----Y---VLSMDS- 91 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~--pl~~~---~h~~~~pI~sI~F~~d----~---l~Ssdd- 91 (248)
-+.++|.|++ .++++-.. |.|++++-.... ++... ......-...|+|+|+ . +..+..
T Consensus 4 P~~~a~~pdG-~l~v~e~~--------G~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~ 74 (331)
T PF07995_consen 4 PRSMAFLPDG-RLLVAERS--------GRIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNAD 74 (331)
T ss_dssp EEEEEEETTS-CEEEEETT--------TEEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-
T ss_pred ceEEEEeCCC-cEEEEeCC--------ceEEEEeCCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEccc
Confidence 4688899974 55555444 489999933222 23222 1122346789999995 2 443321
Q ss_pred -------CeEEEEECCCC-CE------EEEeec---CCCCCeeEEEEeCCCCEEEEEeCCCe-----------EEEEEcC
Q psy2083 92 -------SVVKIWSKDNG-SL------FTCIES---GDQTQFNNLCHIPESGMMFIANENKK-----------ILTYYIP 143 (248)
Q Consensus 92 -------~~IKIWD~~tG-k~------~~tie~---~h~~~In~l~~~pdsgll~sa~ed~~-----------I~~w~Ip 143 (248)
..|.-|....+ .. +....+ .....-..++|.|||.+.++.++... =+++.|.
T Consensus 75 ~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~ 154 (331)
T PF07995_consen 75 EDGGDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRID 154 (331)
T ss_dssp TSSSSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEE
T ss_pred CCCCCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEEEec
Confidence 12322333322 11 111112 11346677999999988887776553 1455555
Q ss_pred CCCCCCCccccc
Q psy2083 144 SLGPAPKWCGFL 155 (248)
Q Consensus 144 ~lG~aP~wcs~l 155 (248)
.-|.+|.-.-|.
T Consensus 155 ~dG~~p~dnP~~ 166 (331)
T PF07995_consen 155 PDGSIPADNPFV 166 (331)
T ss_dssp TTSSB-TTSTTT
T ss_pred ccCcCCCCCccc
Confidence 555555444444
No 435
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=44.15 E-value=44 Score=20.48 Aligned_cols=22 Identities=18% Similarity=0.043 Sum_probs=16.8
Q ss_pred ecCCeeEEEEcCCCceeEEecC
Q psy2083 49 YYIPAFYLYDIRADKPLRVKDH 70 (248)
Q Consensus 49 ~~~G~V~LwDlRs~~pl~~~~h 70 (248)
+.+|.|.-.|+++|+.++.+.-
T Consensus 7 ~~~g~l~AlD~~TG~~~W~~~~ 28 (38)
T PF01011_consen 7 TPDGYLYALDAKTGKVLWKFQT 28 (38)
T ss_dssp TTTSEEEEEETTTTSEEEEEES
T ss_pred CCCCEEEEEECCCCCEEEeeeC
Confidence 3446899999999988887643
No 436
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=43.57 E-value=1.3e+02 Score=28.30 Aligned_cols=71 Identities=8% Similarity=0.069 Sum_probs=47.7
Q ss_pred EEEcCCCceeEEe-cCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe
Q psy2083 56 LYDIRADKPLRVK-DHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN 132 (248)
Q Consensus 56 LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ 132 (248)
++|+.+++.+..- ... .+-.|+.+. ++-+..+.|.-+|.++|+.....+- +.-.+.++|. |.+++++.
T Consensus 189 vidv~s~evl~~GLsmP-----hSPRWhdgrLwvldsgtGev~~vD~~~G~~e~Va~v--pG~~rGL~f~--G~llvVgm 259 (335)
T TIGR03032 189 VIDIPSGEVVASGLSMP-----HSPRWYQGKLWLLNSGRGELGYVDPQAGKFQPVAFL--PGFTRGLAFA--GDFAFVGL 259 (335)
T ss_pred EEEeCCCCEEEcCccCC-----cCCcEeCCeEEEEECCCCEEEEEcCCCCcEEEEEEC--CCCCccccee--CCEEEEEe
Confidence 4799888776541 111 233456555 5556688888999998976555554 4567888998 88888876
Q ss_pred CCC
Q psy2083 133 ENK 135 (248)
Q Consensus 133 ed~ 135 (248)
...
T Consensus 260 Sk~ 262 (335)
T TIGR03032 260 SKL 262 (335)
T ss_pred ccc
Confidence 543
No 437
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=43.10 E-value=74 Score=19.13 Aligned_cols=28 Identities=14% Similarity=0.248 Sum_probs=17.0
Q ss_pred CCCeeEEEEeCCCCEEE-EEeCC--CeEEEE
Q psy2083 113 QTQFNNLCHIPESGMMF-IANEN--KKILTY 140 (248)
Q Consensus 113 ~~~In~l~~~pdsgll~-sa~ed--~~I~~w 140 (248)
...-...+|+|||..|+ ++..+ +.-.+|
T Consensus 8 ~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 8 PGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 34556779999996555 44455 555555
No 438
>PRK13684 Ycf48-like protein; Provisional
Probab=42.99 E-value=2.7e+02 Score=25.58 Aligned_cols=66 Identities=14% Similarity=0.192 Sum_probs=43.8
Q ss_pred CCeeEEEEcCCc--eeeeCCCeEEEEECCCCCEEEEeec--CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 74 LPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIES--GDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 74 ~pI~sI~F~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~--~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
..+.++.|++++ ++.+.++.| +.....|+....+.. +-+...+.+.|..++.. +++++.+.|-.|.
T Consensus 260 ~~l~~v~~~~~~~~~~~G~~G~v-~~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~G~il~~~ 329 (334)
T PRK13684 260 YGYLDLAYRTPGEIWAGGGNGTL-LVSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKG-FVLGQRGVLLRYV 329 (334)
T ss_pred cceeeEEEcCCCCEEEEcCCCeE-EEeCCCCCCCeECCcCCCCCcceEEEEEeCCCce-EEECCCceEEEec
Confidence 457889999876 556677765 456666787776642 11246778888766554 5567788887764
No 439
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=42.71 E-value=4.1e+02 Score=27.59 Aligned_cols=72 Identities=17% Similarity=0.305 Sum_probs=45.7
Q ss_pred CCCeeEEEEcCCc---eeeeCCCeE--EE---EECC----CCCE--EE-Ee-------ecCCCCCeeEEEEeCCC---CE
Q psy2083 73 GLPIRDIKFHDNY---VLSMDSSVV--KI---WSKD----NGSL--FT-CI-------ESGDQTQFNNLCHIPES---GM 127 (248)
Q Consensus 73 ~~pI~sI~F~~d~---l~Ssdd~~I--KI---WD~~----tGk~--~~-ti-------e~~h~~~In~l~~~pds---gl 127 (248)
.+.|..|.+++++ ++.+..+.+ .+ |-.. .|+. .+ ++ ..++...|..+.|+|.| ..
T Consensus 84 ~f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~ 163 (717)
T PF10168_consen 84 LFEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH 163 (717)
T ss_pred ceeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence 4678899999998 334455432 22 3211 1222 11 11 11224688899999964 78
Q ss_pred EEEEeCCCeEEEEEcCC
Q psy2083 128 MFIANENKKILTYYIPS 144 (248)
Q Consensus 128 l~sa~ed~~I~~w~Ip~ 144 (248)
|++=..|+++++|++..
T Consensus 164 l~vLtsdn~lR~y~~~~ 180 (717)
T PF10168_consen 164 LVVLTSDNTLRLYDISD 180 (717)
T ss_pred EEEEecCCEEEEEecCC
Confidence 88889999999999964
No 440
>PF11333 DUF3135: Protein of unknown function (DUF3135); InterPro: IPR021482 This family of proteins with unkown function appears to be restricted to Proteobacteria.
Probab=41.52 E-value=31 Score=25.73 Aligned_cols=22 Identities=32% Similarity=0.533 Sum_probs=19.4
Q ss_pred cCChhhHHHHHHHHHHHHHHHh
Q psy2083 217 SAPFEFEEFKKKKIRERIEQER 238 (248)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~ 238 (248)
.+|-+||+.|++.|++-|+.-.
T Consensus 15 ~dPe~fe~lr~~~~ee~I~~a~ 36 (83)
T PF11333_consen 15 NDPEAFEQLRQELIEEMIESAP 36 (83)
T ss_pred hCHHHHHHHHHHHHHHHHHhCC
Confidence 4899999999999999998743
No 441
>KOG4441|consensus
Probab=41.33 E-value=1.7e+02 Score=29.24 Aligned_cols=82 Identities=7% Similarity=0.026 Sum_probs=50.3
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCC------CeEEEEECCCCCEEEEeecCCCC-CeeEEEEe
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDS------SVVKIWSKDNGSLFTCIESGDQT-QFNNLCHI 122 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd------~~IKIWD~~tGk~~~tie~~h~~-~In~l~~~ 122 (248)
-+|..||.+++.+.....-.....-.++++..+. ++++.+ +++-.+|..+++ +..+.+ .. +=..+...
T Consensus 301 ~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~-W~~~a~--M~~~R~~~~v~ 377 (571)
T KOG4441|consen 301 RSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQ-WTPVAP--MNTKRSDFGVA 377 (571)
T ss_pred ceeEEecCCcCcEeecCCCCcccccccEEEECCEEEEEccccCCCcccceEEEecCCCCc-eeccCC--ccCccccceeE
Confidence 4899999999865544332233455677777776 666544 578889998776 555443 11 11112222
Q ss_pred -CCCCEEEEEeCCCe
Q psy2083 123 -PESGMMFIANENKK 136 (248)
Q Consensus 123 -pdsgll~sa~ed~~ 136 (248)
=+|.+.++|+.|+.
T Consensus 378 ~l~g~iYavGG~dg~ 392 (571)
T KOG4441|consen 378 VLDGKLYAVGGFDGE 392 (571)
T ss_pred EECCEEEEEeccccc
Confidence 36777888888754
No 442
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=40.55 E-value=3.3e+02 Score=26.49 Aligned_cols=77 Identities=16% Similarity=0.086 Sum_probs=41.7
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-eeeeCCCeEEEEECCCCCEEEEeecCCCCC---e-eEEEEeCCCC
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VLSMDSSVVKIWSKDNGSLFTCIESGDQTQ---F-NNLCHIPESG 126 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~---I-n~l~~~pdsg 126 (248)
+...++|...- ..+...... .....+.+.+++ ++.+....+...|.- |+.+..+.. +.. + .++..-|||.
T Consensus 128 ~~~~~iD~~G~-Vrw~~~~~~-~~~~~~~~l~nG~ll~~~~~~~~e~D~~-G~v~~~~~l--~~~~~~~HHD~~~l~nGn 202 (477)
T PF05935_consen 128 SYTYLIDNNGD-VRWYLPLDS-GSDNSFKQLPNGNLLIGSGNRLYEIDLL-GKVIWEYDL--PGGYYDFHHDIDELPNGN 202 (477)
T ss_dssp EEEEEEETTS--EEEEE-GGG-T--SSEEE-TTS-EEEEEBTEEEEE-TT---EEEEEE----TTEE-B-S-EEE-TTS-
T ss_pred ceEEEECCCcc-EEEEEccCc-cccceeeEcCCCCEEEecCCceEEEcCC-CCEEEeeec--CCcccccccccEECCCCC
Confidence 37788887643 222221110 111226777887 666555888899986 888777765 222 2 3688899999
Q ss_pred EEEEEeC
Q psy2083 127 MMFIANE 133 (248)
Q Consensus 127 ll~sa~e 133 (248)
+|+.+.+
T Consensus 203 ~L~l~~~ 209 (477)
T PF05935_consen 203 LLILASE 209 (477)
T ss_dssp EEEEEEE
T ss_pred EEEEEee
Confidence 9999983
No 443
>KOG1898|consensus
Probab=40.47 E-value=4.2e+02 Score=28.92 Aligned_cols=115 Identities=12% Similarity=0.098 Sum_probs=59.6
Q ss_pred cchhcCceeEEEecCCC--CCeeEEEEeCCCCc--EEEeecC-cee---eeecCCeeEEEEcCC-CceeEEecCCC--CC
Q psy2083 6 LRQDKGSLFTCIESGDQ--TQFNNLCHIPESGM--MFIANEN-KKI---LTYYIPAFYLYDIRA-DKPLRVKDHMY--GL 74 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~--~~V~~~~~~~~~g~--l~~ag~d-~~~---~~~~~G~V~LwDlRs-~~pl~~~~h~~--~~ 74 (248)
+|+.+|+++..++.+.. +.-++.+.|+..+. +.+++.. +.. ...++|-++.|++-. ++.+ .+-|.. ..
T Consensus 858 ~d~~s~~~~~~~~l~~ne~a~~v~~~~fs~~~~~~~~~v~~~~~~~l~~~~~~~g~~ytyk~~~~g~~l-ellh~T~~~~ 936 (1205)
T KOG1898|consen 858 FDPKSGKIICLVELGQNEAAFSVCAVDFSSSEYQPFVAVGVATTEQLDSKSISSGFVYTYKFVRNGDKL-ELLHKTEIPG 936 (1205)
T ss_pred EcCCCCceEEEEeecCCcchhheeeeeeccCCCceEEEEEeeccccccccccCCCceEEEEEEecCcee-eeeeccCCCc
Confidence 67888888888875421 11223333433332 3333322 111 122556788888544 4422 222221 24
Q ss_pred CeeEEEEcCCceeeeCCCeEEEEECCCCCEEEEeecCC-CCCeeEEEE
Q psy2083 75 PIRDIKFHDNYVLSMDSSVVKIWSKDNGSLFTCIESGD-QTQFNNLCH 121 (248)
Q Consensus 75 pI~sI~F~~d~l~Ssdd~~IKIWD~~tGk~~~tie~~h-~~~In~l~~ 121 (248)
+|-.|+=-.+.++++-.+.++++|.-+.+++...+..+ +..|.+++.
T Consensus 937 ~v~Ai~~f~~~~LagvG~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt 984 (1205)
T KOG1898|consen 937 PVGAICPFQGRVLAGVGRFLRLYDLGKKKLLRKCELKFIPNRISSIQT 984 (1205)
T ss_pred cceEEeccCCEEEEecccEEEEeeCChHHHHhhhhhccCceEEEEEee
Confidence 55555533334888888899999987655554433211 234555554
No 444
>KOG3611|consensus
Probab=39.62 E-value=2.6e+02 Score=29.17 Aligned_cols=73 Identities=19% Similarity=0.306 Sum_probs=46.0
Q ss_pred ceeEEecCCCCCCeeEEEEc----CCc-----eeeeCCC-eEEEEECCCCC-----EEEEee--cCCCCCeeEEEEeCCC
Q psy2083 63 KPLRVKDHMYGLPIRDIKFH----DNY-----VLSMDSS-VVKIWSKDNGS-----LFTCIE--SGDQTQFNNLCHIPES 125 (248)
Q Consensus 63 ~pl~~~~h~~~~pI~sI~F~----~d~-----l~Ssdd~-~IKIWD~~tGk-----~~~tie--~~h~~~In~l~~~pds 125 (248)
+|+.++... ...+.|.-+ .++ .+++|+| +.|+-...+.. .+-.++ + +..+|++|.+++-.
T Consensus 399 ~P~l~~~~~--~~~t~I~Vd~~~~~~~~ydVlflGTd~G~vlKvV~~~~~~~~~~~llEElqvf~-~~~pI~~m~Ls~~~ 475 (737)
T KOG3611|consen 399 RPLLVKTGD--YRLTQIVVDRVAGLDGNYDVLFLGTDAGTVLKVVSPGKESGKSNVLLEELQVFP-DAEPIRSMQLSSKR 475 (737)
T ss_pred CceEEeccc--ceEEEEEEEEecCCCCcEEEEEEecCCCeEEEEEecCCccCccceeEEEEeecC-CCCceeEEEecccC
Confidence 577776432 445667666 333 4456665 45554444311 333333 3 36899999999999
Q ss_pred CEEEEEeCCCeEE
Q psy2083 126 GMMFIANENKKIL 138 (248)
Q Consensus 126 gll~sa~ed~~I~ 138 (248)
+.|++|+.++-++
T Consensus 476 ~~LyVgs~~gV~q 488 (737)
T KOG3611|consen 476 GSLYVGSRSGVVQ 488 (737)
T ss_pred CeEEEEccCcEEE
Confidence 9999999998553
No 445
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=38.15 E-value=4.5e+02 Score=27.12 Aligned_cols=60 Identities=23% Similarity=0.383 Sum_probs=43.2
Q ss_pred CCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhcc-ccccccCCceeecHhHHh
Q psy2083 113 QTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEEN-IIENVYDDYKFVTRQELE 183 (248)
Q Consensus 113 ~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~-~~~~~yd~y~fvt~~~l~ 183 (248)
...|-.+-|.+++..+++..+.|.|..|+... .-|+.++ ++.-. ....+|. +||+.-+++
T Consensus 129 ~~kvv~Ik~~~~~~~I~vvl~nG~i~~~d~~~--------~~l~~~~-~l~~~~~~~v~ys--~fv~~~~~~ 189 (670)
T PF10395_consen 129 DDKVVGIKFSSDGKIIYVVLENGSIQIYDFSE--------NSLEKVP-QLKLKSSINVSYS--KFVNDFELE 189 (670)
T ss_pred ccceEEEEEecCCCEEEEEEcCCcEEEEeccc--------ccccccc-ccccccccceehh--hhhcccccc
Confidence 45677889999999999999999999998721 3344444 33332 3457788 899877743
No 446
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=37.54 E-value=3e+02 Score=27.33 Aligned_cols=21 Identities=14% Similarity=0.494 Sum_probs=18.0
Q ss_pred CCCeeEEEEeCCCCEEEEEeC
Q psy2083 113 QTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 113 ~~~In~l~~~pdsgll~sa~e 133 (248)
.++++.+||+||++.||+.-+
T Consensus 501 gaE~tG~~fspDg~tlFvniQ 521 (524)
T PF05787_consen 501 GAEITGPCFSPDGRTLFVNIQ 521 (524)
T ss_pred CcccccceECCCCCEEEEEEe
Confidence 578999999999999988654
No 447
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=37.50 E-value=3.3e+02 Score=24.99 Aligned_cols=64 Identities=3% Similarity=-0.134 Sum_probs=39.9
Q ss_pred eeecCCeeEEEEcCCCceeEEecCCC-CCCeeEEEEcCCc--eeeeCCCeEEEEECCCCCEEEEeec
Q psy2083 47 LTYYIPAFYLYDIRADKPLRVKDHMY-GLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIES 110 (248)
Q Consensus 47 ~~~~~G~V~LwDlRs~~pl~~~~h~~-~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~ 110 (248)
.++.+|.|.-.|..+++.++...... ...++.=.+..++ .+++.++.+-..|.++|+.+-+.+.
T Consensus 73 ~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~i~~g~~~g~~y~ld~~~G~~~W~~~~ 139 (370)
T COG1520 73 VGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGKIYVGSWDGKLYALDASTGTLVWSRNV 139 (370)
T ss_pred EecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCeEEEecccceEEEEECCCCcEEEEEec
Confidence 44456788889999988776543321 0112222222255 5555677788889888998888776
No 448
>KOG2444|consensus
Probab=36.64 E-value=60 Score=28.96 Aligned_cols=46 Identities=11% Similarity=0.049 Sum_probs=25.0
Q ss_pred CCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCceeeeCCCeEEEEECCCC
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNYVLSMDSSVVKIWSKDNG 102 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~l~Ssdd~~IKIWD~~tG 102 (248)
+|.|+.|.+.-++-+-...|....|+... ++++.++.|+||+...+
T Consensus 123 dg~ir~~n~~p~k~~g~~g~h~~~~~e~~------ivv~sd~~i~~a~~S~d 168 (238)
T KOG2444|consen 123 DGRIRACNIKPNKVLGYVGQHNFESGEEL------IVVGSDEFLKIADTSHD 168 (238)
T ss_pred CCceeeeccccCceeeeeccccCCCccee------EEecCCceEEeeccccc
Confidence 35899998887776665554433343333 33344444445544443
No 449
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=35.43 E-value=1.9e+02 Score=21.57 Aligned_cols=47 Identities=13% Similarity=0.210 Sum_probs=32.3
Q ss_pred CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEc
Q psy2083 92 SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYI 142 (248)
Q Consensus 92 ~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~I 142 (248)
+.|-.||.++ .....++ -...|.+.++|++..|++++- ...|++|..
T Consensus 36 ~~Vvyyd~~~--~~~va~g--~~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~ 83 (86)
T PF01731_consen 36 GNVVYYDGKE--VKVVASG--FSFANGIAISPDKKYLYVASSLAHSIHVYKR 83 (86)
T ss_pred ceEEEEeCCE--eEEeecc--CCCCceEEEcCCCCEEEEEeccCCeEEEEEe
Confidence 3444677653 2223333 567788999999999998875 478999864
No 450
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=33.44 E-value=4.1e+02 Score=24.94 Aligned_cols=110 Identities=15% Similarity=0.173 Sum_probs=65.3
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC------CCceeEEecC--C---CCCCeeEEEEcCCc-------
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR------ADKPLRVKDH--M---YGLPIRDIKFHDNY------- 85 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR------s~~pl~~~~h--~---~~~pI~sI~F~~d~------- 85 (248)
+-+.++++|.+-+-++.... |...|||.. .+.|+.+.-- . .....+.|.|+...
T Consensus 24 N~WGia~~p~~~~WVadngT--------~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~ 95 (336)
T TIGR03118 24 NAWGLSYRPGGPFWVANTGT--------GTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGE 95 (336)
T ss_pred ccceeEecCCCCEEEecCCc--------ceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCC
Confidence 45789999965443333333 489999997 3456554311 0 11346778887421
Q ss_pred --------eeeeCCCeEEEEECCCCCE-----EEEeecCCCCC-eeEEEEeCC--CCEEEEEe-CCCeEEEEE
Q psy2083 86 --------VLSMDSSVVKIWSKDNGSL-----FTCIESGDQTQ-FNNLCHIPE--SGMMFIAN-ENKKILTYY 141 (248)
Q Consensus 86 --------l~Ssdd~~IKIWD~~tGk~-----~~tie~~h~~~-In~l~~~pd--sgll~sa~-ed~~I~~w~ 141 (248)
|.+++|++|.=|...-+-. +..+....... -..+++.++ +..|..++ .+++|.+|+
T Consensus 96 g~~~~a~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd 168 (336)
T TIGR03118 96 GITGPSRFLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFK 168 (336)
T ss_pred CcccceeEEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEec
Confidence 6677899999998643322 12232100122 335677654 56777776 578999997
No 451
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=32.00 E-value=1.2e+02 Score=18.40 Aligned_cols=19 Identities=5% Similarity=0.300 Sum_probs=15.5
Q ss_pred CCCEEEEEeCCCeEEEEEc
Q psy2083 124 ESGMMFIANENKKILTYYI 142 (248)
Q Consensus 124 dsgll~sa~ed~~I~~w~I 142 (248)
.++.+++++.|+++..++.
T Consensus 20 ~~g~vyv~~~dg~l~ald~ 38 (40)
T PF13570_consen 20 AGGRVYVGTGDGNLYALDA 38 (40)
T ss_dssp CTSEEEEE-TTSEEEEEET
T ss_pred ECCEEEEEcCCCEEEEEeC
Confidence 5678999999999999875
No 452
>PF15084 DUF4550: Domain of unknown function (DUF4550)
Probab=31.94 E-value=70 Score=24.76 Aligned_cols=65 Identities=14% Similarity=0.323 Sum_probs=37.3
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCceeee-CCC-eEEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNYVLSM-DSS-VVKIWS 98 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~l~Ss-dd~-~IKIWD 98 (248)
....++++.|+...-+|..++.. +++-|. .+..+++ ..|.+.. ....+.|..- +.+ .+||||
T Consensus 17 ep~k~DvV~f~~~AKvF~e~~~K--------~~~~w~--~gd~~Wv~W~~~~~i-----~vt~e~l~kl~~h~i~~kiwD 81 (99)
T PF15084_consen 17 EPKKVDVVVFGNVAKVFLENESK--------TVKPWH--EGDQVWVSWTHTFNI-----NVTKELLKKLYFHKITLKIWD 81 (99)
T ss_pred ccceeeEEEecceeeEEEcCCce--------EeeeEe--cCCEEEEEEEEEEEe-----ccCHHHHHHHHcCeEEEEEEc
Confidence 34567777777777788877764 788888 3433332 3444222 2222222222 233 689999
Q ss_pred CCC
Q psy2083 99 KDN 101 (248)
Q Consensus 99 ~~t 101 (248)
.+.
T Consensus 82 tkd 84 (99)
T PF15084_consen 82 TKD 84 (99)
T ss_pred chh
Confidence 874
No 453
>COG4247 Phy 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) [Lipid metabolism]
Probab=31.78 E-value=1.1e+02 Score=28.09 Aligned_cols=86 Identities=22% Similarity=0.424 Sum_probs=53.6
Q ss_pred eeeeC-CCeEEEEECCCCCEEEEeecCCCCCeeEEEE---eC-CC--CEEEEEeCC--CeEEEEEcCCCCCCCCcccccc
Q psy2083 86 VLSMD-SSVVKIWSKDNGSLFTCIESGDQTQFNNLCH---IP-ES--GMMFIANEN--KKILTYYIPSLGPAPKWCGFLD 156 (248)
Q Consensus 86 l~Ssd-d~~IKIWD~~tGk~~~tie~~h~~~In~l~~---~p-ds--gll~sa~ed--~~I~~w~Ip~lG~aP~wcs~ld 156 (248)
|++++ ..-++++|+. |+.+++++++ ..|.|.+ +| +| =-|++|++- .+|.+|-| -|-| ..|+
T Consensus 70 vItt~Kk~Gl~VYDLs-GkqLqs~~~G---k~NNVDLrygF~LgG~~idiaaASdR~~~~i~~y~I---dp~~---~~L~ 139 (364)
T COG4247 70 VITTVKKAGLRVYDLS-GKQLQSVNPG---KYNNVDLRYGFQLGGQSIDIAAASDRQNDKIVFYKI---DPNP---QYLE 139 (364)
T ss_pred EEEeeccCCeEEEecC-CCeeeecCCC---cccccccccCcccCCeEEEEEecccccCCeEEEEEe---CCCc---ccee
Confidence 66665 5579999997 9999999873 4444443 12 23 235556543 46777766 4566 7899
Q ss_pred chhhhhhc--ccc-----------ccccCCceeecHhH
Q psy2083 157 NLTEELEE--NII-----------ENVYDDYKFVTRQE 181 (248)
Q Consensus 157 ~~tee~e~--~~~-----------~~~yd~y~fvt~~~ 181 (248)
+||.-=.. ... +-.=|=|.||++.|
T Consensus 140 sitD~n~p~ss~~s~~YGl~lyrs~ktgd~yvfV~~~q 177 (364)
T COG4247 140 SITDSNAPYSSSSSSAYGLALYRSPKTGDYYVFVNRRQ 177 (364)
T ss_pred eccCCCCccccCcccceeeEEEecCCcCcEEEEEecCC
Confidence 99985211 111 12235588999876
No 454
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=30.33 E-value=4.8e+02 Score=24.76 Aligned_cols=68 Identities=9% Similarity=0.084 Sum_probs=40.6
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-eeeeCCCeEEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VLSMDSSVVKIWS 98 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~Ssdd~~IKIWD 98 (248)
+.+..++.+|+++.++.-..++ ++.+....-.+.+...+.....+...+.|..+. |+-.-...|.+..
T Consensus 217 ~~i~~iavSpng~~iAl~t~~g--------~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~dav~l~~~~~l~lvg 285 (410)
T PF04841_consen 217 GPIIKIAVSPNGKFIALFTDSG--------NLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDAVVLSWEDELLLVG 285 (410)
T ss_pred CCeEEEEECCCCCEEEEEECCC--------CEEEEECcccceeEEeecCcCCCCcEEEEECCCcEEEEeCCEEEEEC
Confidence 5788999999887766655553 677776555556665544433455677776554 3322233444444
No 455
>KOG4460|consensus
Probab=30.11 E-value=5.6e+02 Score=26.06 Aligned_cols=31 Identities=13% Similarity=0.234 Sum_probs=24.1
Q ss_pred CeeEEEEeCCC---CEEEEEeCCCeEEEEEcCCC
Q psy2083 115 QFNNLCHIPES---GMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 115 ~In~l~~~pds---gll~sa~ed~~I~~w~Ip~l 145 (248)
.+..++|+|+| ..|+.-+.|..|++|+...+
T Consensus 167 tl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~ 200 (741)
T KOG4460|consen 167 TLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEP 200 (741)
T ss_pred eeeeccccCCccCCceEEEEecCcEEEEEecCCc
Confidence 56678899987 55667777999999997654
No 456
>KOG4649|consensus
Probab=29.44 E-value=4.6e+02 Score=24.28 Aligned_cols=94 Identities=9% Similarity=0.051 Sum_probs=57.0
Q ss_pred ecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEE-EEcCCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCe
Q psy2083 41 NENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDI-KFHDNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQF 116 (248)
Q Consensus 41 g~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI-~F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~I 116 (248)
.+|-.++|++.|.+..-|..+|...+.+.-. ..|+.= .-.+++ -.++.|+....-|.++..++...+-+ ....
T Consensus 62 vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~--~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcg-G~~f 138 (354)
T KOG4649|consen 62 VGDFVVLGCYSGGLYFLCVKTGSQIWNFVIL--ETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCG-GGTF 138 (354)
T ss_pred ECCEEEEEEccCcEEEEEecchhheeeeeeh--hhhccceEEcCCCceEEEecCCCcEEEecccccceEEecccC-Ccee
Confidence 3454679999999999999999666654322 234321 222333 44568999999999988877766531 2222
Q ss_pred eEEEEeCCCCEEEEEeCCCeE
Q psy2083 117 NNLCHIPESGMMFIANENKKI 137 (248)
Q Consensus 117 n~l~~~pdsgll~sa~ed~~I 137 (248)
-+=++.|..+-|+.|...+.+
T Consensus 139 ~sP~i~~g~~sly~a~t~G~v 159 (354)
T KOG4649|consen 139 VSPVIAPGDGSLYAAITAGAV 159 (354)
T ss_pred ccceecCCCceEEEEeccceE
Confidence 334555633344444444444
No 457
>PRK09744 DNA-binding transcriptional regulator DicC; Provisional
Probab=28.11 E-value=14 Score=27.12 Aligned_cols=20 Identities=25% Similarity=0.399 Sum_probs=14.4
Q ss_pred hhhcCChhhHHHHHHHHHHH
Q psy2083 214 KSVSAPFEFEEFKKKKIRER 233 (248)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~ 233 (248)
+.-.+|.-|+||||-+-.-|
T Consensus 49 ~LK~~p~lY~~~~~~~~~~~ 68 (75)
T PRK09744 49 ELQYDPKVYDEYRKAKRAGR 68 (75)
T ss_pred ceecCHHHHHHHHHhccccc
Confidence 44567999999999754333
No 458
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=28.08 E-value=4.5e+02 Score=23.73 Aligned_cols=37 Identities=19% Similarity=0.406 Sum_probs=30.0
Q ss_pred CCeeEEEEcCCceeeeCCCeEEEEECCCCCEEEEeec
Q psy2083 74 LPIRDIKFHDNYVLSMDSSVVKIWSKDNGSLFTCIES 110 (248)
Q Consensus 74 ~pI~sI~F~~d~l~Ssdd~~IKIWD~~tGk~~~tie~ 110 (248)
.+..+++++...|++-.++.|.||+..+|+.++++..
T Consensus 244 ~~p~~~~~~~pyll~~~~~~ievr~l~~~~l~q~i~~ 280 (302)
T smart00036 244 FMPESFAYHSPYLLAFHDNGIEIRSIKTGELLQELAD 280 (302)
T ss_pred CcccEEEEECCEEEEEcCCcEEEEECCCCceEEEEec
Confidence 4557788886667777778899999999999999874
No 459
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=28.00 E-value=5.8e+02 Score=24.96 Aligned_cols=61 Identities=10% Similarity=0.104 Sum_probs=35.9
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc--eeEEe-----cCCCCCCeeEEEEcCC
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK--PLRVK-----DHMYGLPIRDIKFHDN 84 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~--pl~~~-----~h~~~~pI~sI~F~~d 84 (248)
+..+..+ -..-+.+.|.|++. ++.+-... |.|++++-..+. ++... ..+ ......|+|||+
T Consensus 22 ~~~va~G-L~~Pw~maflPDG~-llVtER~~-------G~I~~v~~~~~~~~~~~~l~~v~~~~g-e~GLlglal~Pd 89 (454)
T TIGR03606 22 KKVLLSG-LNKPWALLWGPDNQ-LWVTERAT-------GKILRVNPETGEVKVVFTLPEIVNDAQ-HNGLLGLALHPD 89 (454)
T ss_pred EEEEECC-CCCceEEEEcCCCe-EEEEEecC-------CEEEEEeCCCCceeeeecCCceeccCC-CCceeeEEECCC
Confidence 3444443 45668999999765 44444322 478988876543 22211 111 356789999987
No 460
>KOG2280|consensus
Probab=27.44 E-value=4e+02 Score=28.01 Aligned_cols=95 Identities=13% Similarity=0.177 Sum_probs=52.0
Q ss_pred EEEEeCCCCcEEEeecCcee--eeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCCC
Q psy2083 27 NLCHIPESGMMFIANENKKI--LTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDNG 102 (248)
Q Consensus 27 ~~~~~~~~g~l~~ag~d~~~--~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~tG 102 (248)
-+..-|-+|-++..=++.+. .-+....|++|++- |+++....-.| .++-...|+.+. |+-.-+++|.+++.- |
T Consensus 37 ~fa~Ap~gGpIAV~r~p~~~~~~~~a~~~I~If~~s-G~lL~~~~w~~-~~lI~mgWs~~eeLI~v~k~g~v~Vy~~~-g 113 (829)
T KOG2280|consen 37 YFACAPFGGPIAVTRSPSKLVPLYSARPYIRIFNIS-GQLLGRILWKH-GELIGMGWSDDEELICVQKDGTVHVYGLL-G 113 (829)
T ss_pred EEEecccCCceEEEecccccccccccceeEEEEecc-ccchHHHHhcC-CCeeeecccCCceEEEEeccceEEEeecc-h
Confidence 33444555655554444221 11122467888874 55554321122 277889999887 444689999999976 5
Q ss_pred CEEEE--e--ecCCCCCeeEEEEeCCC
Q psy2083 103 SLFTC--I--ESGDQTQFNNLCHIPES 125 (248)
Q Consensus 103 k~~~t--i--e~~h~~~In~l~~~pds 125 (248)
+.... + +. -...|..+.|+.+|
T Consensus 114 e~ie~~svg~e~-~~~~I~ec~~f~~G 139 (829)
T KOG2280|consen 114 EFIESNSVGFES-QMSDIVECRFFHNG 139 (829)
T ss_pred hhhccccccccc-ccCceeEEEEecCc
Confidence 44333 2 21 12346655665544
No 461
>KOG4017|consensus
Probab=27.10 E-value=44 Score=30.13 Aligned_cols=52 Identities=27% Similarity=0.423 Sum_probs=33.8
Q ss_pred ccCCceeecHhHHhhcC-Cc--cccCC----Ccccccce-eeeechhhHHHHhhhcCChhhH
Q psy2083 170 VYDDYKFVTRQELEDLG-LG--HLIGT----SLLRAYMH-GFFMDIRLYRKAKSVSAPFEFE 223 (248)
Q Consensus 170 ~yd~y~fvt~~~l~~l~-~~--~ligt----~~l~~ymh-gyf~~~~ly~~~~~~~~~~~~~ 223 (248)
-++-|+|||+.|-+.== |. +|=+- =+.|++-| |-|=+++||=+... +-||.+
T Consensus 133 ~~ekykLlTkTEcK~eYLLtD~eL~~re~l~~l~k~NPH~~~wg~MkLYL~~qV--e~fale 192 (274)
T KOG4017|consen 133 KDEKYKLLTKTECKSEYLLTDCELDDRELLRRLQKKNPHNGTWGDMKLYLRCQV--EQFALE 192 (274)
T ss_pred hhhhhheeehhhhhhhhhccCccccchhhhHHhhcCCCCCCchhhhhhHHHHHH--HHHHHH
Confidence 45789999998865321 11 13222 26788888 99999999987553 345443
No 462
>COG3211 PhoX Predicted phosphatase [General function prediction only]
Probab=27.06 E-value=1.3e+02 Score=30.42 Aligned_cols=58 Identities=12% Similarity=0.276 Sum_probs=38.1
Q ss_pred EEEEcCCc--eeeeC-------CCeEEEE-----ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC
Q psy2083 78 DIKFHDNY--VLSMD-------SSVVKIW-----SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK 135 (248)
Q Consensus 78 sI~F~~d~--l~Ssd-------d~~IKIW-----D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~ 135 (248)
.|.|.|.+ .++.| +...-+| |..+|+....+.....+++...||+||++.+|++-+.+
T Consensus 504 nl~fD~~GrLWi~TDg~~s~~~~~~~G~~~m~~~~p~~g~~~rf~t~P~g~E~tG~~FspD~~TlFV~vQHP 575 (616)
T COG3211 504 NLAFDPWGRLWIQTDGSGSTLRNRFRGVTQMLTPDPKTGTIKRFLTGPIGCEFTGPCFSPDGKTLFVNVQHP 575 (616)
T ss_pred ceEECCCCCEEEEecCCCCccCcccccccccccCCCccceeeeeccCCCcceeecceeCCCCceEEEEecCC
Confidence 46677766 22211 2345566 55566666666542246999999999999999987654
No 463
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=26.78 E-value=1.9e+02 Score=25.45 Aligned_cols=54 Identities=9% Similarity=0.226 Sum_probs=39.8
Q ss_pred eeeeCCCeEEEEECC--CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC------eEEEEE
Q psy2083 86 VLSMDSSVVKIWSKD--NGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK------KILTYY 141 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~--tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~------~I~~w~ 141 (248)
++++....|.+||+. ..+++.++.. -..|..+..+..|.+|++-=++. .+++|+
T Consensus 32 fva~~g~~Vev~~l~~~~~~~~~~F~T--v~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~ 93 (215)
T PF14761_consen 32 FVAASGCKVEVYDLEQEECPLLCTFST--VGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYF 93 (215)
T ss_pred EEEcCCCEEEEEEcccCCCceeEEEcc--hhheeEEEeccccceEEEEEeecCCccceEEEEEE
Confidence 344667779999977 4567778876 68899999999999988864432 456665
No 464
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=26.16 E-value=2.1e+02 Score=21.27 Aligned_cols=32 Identities=13% Similarity=0.283 Sum_probs=24.1
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA 61 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs 61 (248)
..-|.+..+|++..++.++.-. +.|.+|..+.
T Consensus 54 ~~aNGI~~s~~~k~lyVa~~~~-------~~I~vy~~~~ 85 (86)
T PF01731_consen 54 SFANGIAISPDKKYLYVASSLA-------HSIHVYKRHK 85 (86)
T ss_pred CCCceEEEcCCCCEEEEEeccC-------CeEEEEEecC
Confidence 4557888888888888777664 4899988764
No 465
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=25.24 E-value=5.4e+02 Score=23.65 Aligned_cols=66 Identities=12% Similarity=0.188 Sum_probs=36.6
Q ss_pred CCeeEEEEcCCc--eeee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 74 LPIRDIKFHDNY--VLSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 74 ~pI~sI~F~~d~--l~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
..|+.+..++++ |+.+ .-+..+-||.-. ......+-..+..|.++.|.||+++.+++ ..+.|+.=+
T Consensus 145 gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~-~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~ 213 (302)
T PF14870_consen 145 GSINDITRSSDGRYVAVSSRGNFYSSWDPGQ-TTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSD 213 (302)
T ss_dssp --EEEEEE-TTS-EEEEETTSSEEEEE-TT--SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE
T ss_pred ceeEeEEECCCCcEEEEECcccEEEEecCCC-ccceEEccCccceehhceecCCCCEEEEe-CCcEEEEcc
Confidence 568888888887 4344 445567787642 11222221115789999999998877765 788776543
No 466
>KOG4499|consensus
Probab=24.94 E-value=73 Score=28.93 Aligned_cols=30 Identities=17% Similarity=0.272 Sum_probs=23.8
Q ss_pred ccccchhcCceeEEEecCCCCCeeEEEEeCC
Q psy2083 3 AQELRQDKGSLFTCIESGDQTQFNNLCHIPE 33 (248)
Q Consensus 3 ~~~~~~~~G~~~~~~~~~~~~~V~~~~~~~~ 33 (248)
.|.+|+.+|+++..+.-. ...|+++||--.
T Consensus 235 V~~~dp~tGK~L~eiklP-t~qitsccFgGk 264 (310)
T KOG4499|consen 235 VQKVDPTTGKILLEIKLP-TPQITSCCFGGK 264 (310)
T ss_pred EEEECCCCCcEEEEEEcC-CCceEEEEecCC
Confidence 478999999999998755 578888887643
No 467
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=24.56 E-value=2.1e+02 Score=26.90 Aligned_cols=49 Identities=8% Similarity=0.159 Sum_probs=32.0
Q ss_pred CeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCc-cccccchhhhhh
Q psy2083 115 QFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKW-CGFLDNLTEELE 163 (248)
Q Consensus 115 ~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~w-cs~ld~~tee~e 163 (248)
.|-+++..+..+++++..+++.|++|++..=|...+. +.+-+++.+.+.
T Consensus 191 ~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~~~~~~~~~~~~~~~i~~~~~ 240 (422)
T PF08801_consen 191 KIVQVAVDPSRRLLYTLTSDGSIQVWDLGPGGSTLVSKVDIQEIILSSLQ 240 (422)
T ss_dssp -EEEEEEETTTTEEEEEESSE-EEEEEE-SS-EEEEEEEEHHHHHHHHHH
T ss_pred ceeeEEecCCcCEEEEEeCCCcEEEEEEeCCCCceeeehhHHHHHHHHHH
Confidence 4889999998899999999999999999762232222 233344544443
No 468
>KOG4387|consensus
Probab=24.53 E-value=52 Score=28.23 Aligned_cols=17 Identities=24% Similarity=0.814 Sum_probs=12.8
Q ss_pred EEEEEcCCCCCCCCccc
Q psy2083 137 ILTYYIPSLGPAPKWCG 153 (248)
Q Consensus 137 I~~w~Ip~lG~aP~wcs 153 (248)
+..-+...+++.|+|||
T Consensus 17 ~~~~~~~~~~~gp~wCs 33 (191)
T KOG4387|consen 17 QMLVCCSTPAPGPRWCS 33 (191)
T ss_pred eeEEEccCCCCCcchhh
Confidence 44455677899999995
No 469
>PHA02713 hypothetical protein; Provisional
Probab=23.67 E-value=3.7e+02 Score=26.64 Aligned_cols=89 Identities=9% Similarity=0.022 Sum_probs=43.2
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCC------CeEEEEECCCCCEEEEeecC-CCCCeeEEEEe
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDS------SVVKIWSKDNGSLFTCIESG-DQTQFNNLCHI 122 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd------~~IKIWD~~tGk~~~tie~~-h~~~In~l~~~ 122 (248)
.+|..||.++.+......-.....-.+++...+. ++++.+ ..|..+|+++.+.++.+.+= .+-.-.+++.
T Consensus 432 ~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~- 510 (557)
T PHA02713 432 NKVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTIL- 510 (557)
T ss_pred ceEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEE-
Confidence 3688899998754332211100101123333344 555422 35778999872234333320 0111112222
Q ss_pred CCCCEEEEEeCCC--eEEEEE
Q psy2083 123 PESGMMFIANENK--KILTYY 141 (248)
Q Consensus 123 pdsgll~sa~ed~--~I~~w~ 141 (248)
-++.+.++|+.++ .+..|+
T Consensus 511 ~~~~iyv~Gg~~~~~~~e~yd 531 (557)
T PHA02713 511 HDNTIMMLHCYESYMLQDTFN 531 (557)
T ss_pred ECCEEEEEeeecceeehhhcC
Confidence 2778888888777 344444
No 470
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=23.55 E-value=5e+02 Score=22.72 Aligned_cols=115 Identities=10% Similarity=0.128 Sum_probs=62.3
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEE-EcCCC--ceeEEecCCCCCCeeEEEEcCCc----eee--eCCCeE
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLY-DIRAD--KPLRVKDHMYGLPIRDIKFHDNY----VLS--MDSSVV 94 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~Lw-DlRs~--~pl~~~~h~~~~pI~sI~F~~d~----l~S--sdd~~I 94 (248)
.+..-.|.++ |.+.++.... +..+++ +-.++ .++..---....+|.++.++||+ ++. .+++.|
T Consensus 67 ~l~~PS~d~~-g~~W~v~~~~-------~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v 138 (253)
T PF10647_consen 67 SLTRPSWDPD-GWVWTVDDGS-------GGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRV 138 (253)
T ss_pred ccccccccCC-CCEEEEEcCC-------CceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeE
Confidence 3444555665 6665554433 144555 44444 33333221111289999999998 333 235555
Q ss_pred EEEECC---CCCEEE------EeecCCCCCeeEEEEeCCCCEEEEEeCCC-eEEEEEcCCCCCC
Q psy2083 95 KIWSKD---NGSLFT------CIESGDQTQFNNLCHIPESGMMFIANENK-KILTYYIPSLGPA 148 (248)
Q Consensus 95 KIWD~~---tGk~~~------tie~~h~~~In~l~~~pdsgll~sa~ed~-~I~~w~Ip~lG~a 148 (248)
.|=-+. .|.+.. ...+ ....+.++.|.+++.+++.+.... .+.. ++...|..
T Consensus 139 ~va~V~r~~~g~~~~l~~~~~~~~~-~~~~v~~v~W~~~~~L~V~~~~~~~~~~~-~v~~dG~~ 200 (253)
T PF10647_consen 139 YVAGVVRDGDGVPRRLTGPRRVAPP-LLSDVTDVAWSDDSTLVVLGRSAGGPVVR-LVSVDGGP 200 (253)
T ss_pred EEEEEEeCCCCCcceeccceEeccc-ccCcceeeeecCCCEEEEEeCCCCCceeE-EEEccCCc
Confidence 554322 241111 1111 135889999999999888887654 3444 55555544
No 471
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=23.14 E-value=6.8e+02 Score=24.05 Aligned_cols=98 Identities=14% Similarity=0.156 Sum_probs=41.8
Q ss_pred cchhcCceeEEEecCC----CCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEE
Q psy2083 6 LRQDKGSLFTCIESGD----QTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIK 80 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~----~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~ 80 (248)
.|+.+|..++-+-..+ .---+.-||.+++.. +|++..++ ...+.+-||.+++-.+..+.. +.......
T Consensus 15 ~D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg------~~nly~lDL~t~~i~QLTdg~-g~~~~g~~ 87 (386)
T PF14583_consen 15 IDPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDG------NRNLYLLDLATGEITQLTDGP-GDNTFGGF 87 (386)
T ss_dssp E-TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTS------S-EEEEEETTT-EEEE---SS--B-TTT-E
T ss_pred eCCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCC------CcceEEEEcccCEEEECccCC-CCCccceE
Confidence 4677787777665431 011233466666655 44444343 247788899998765544422 12223444
Q ss_pred EcCCc--ee-eeCCCeEEEEECCCCCEEEEeec
Q psy2083 81 FHDNY--VL-SMDSSVVKIWSKDNGSLFTCIES 110 (248)
Q Consensus 81 F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~ 110 (248)
.+++. +. -.+.+.|+--|++|.+.-.-++.
T Consensus 88 ~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~ 120 (386)
T PF14583_consen 88 LSPDDRALYYVKNGRSLRRVDLDTLEERVVYEV 120 (386)
T ss_dssp E-TTSSEEEEEETTTEEEEEETTT--EEEEEE-
T ss_pred EecCCCeEEEEECCCeEEEEECCcCcEEEEEEC
Confidence 45554 32 33556777778888776555554
No 472
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.90 E-value=6.3e+02 Score=23.58 Aligned_cols=114 Identities=13% Similarity=0.193 Sum_probs=64.2
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC-CCeEEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD-SSVVKIWS 98 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd-d~~IKIWD 98 (248)
.++|.++.|+|++..||++.... .-.+|=--.|.-+.+-.-.--..--.|++..++ +++.. ++.+-+.-
T Consensus 85 ~~nvS~LTynp~~rtLFav~n~p--------~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~ 156 (316)
T COG3204 85 TANVSSLTYNPDTRTLFAVTNKP--------AAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFT 156 (316)
T ss_pred cccccceeeCCCcceEEEecCCC--------ceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEE
Confidence 35699999999999999988775 333332222333322110000112345555554 33332 44444444
Q ss_pred CCCCCEE-------EEeec-CC-CCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 99 KDNGSLF-------TCIES-GD-QTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 99 ~~tGk~~-------~tie~-~h-~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
...+..+ -+++. ++ ....-.+++.|..+.|+.+-|-..|.+|-+.
T Consensus 157 vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~ 210 (316)
T COG3204 157 VDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVT 210 (316)
T ss_pred EcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEe
Confidence 3332111 11221 11 2345579999999999999999999998765
No 473
>PF13110 DUF3966: Protein of unknown function (DUF3966)
Probab=22.41 E-value=43 Score=21.99 Aligned_cols=18 Identities=39% Similarity=0.311 Sum_probs=13.9
Q ss_pred ChhhHHHHHHHHHHHHHH
Q psy2083 219 PFEFEEFKKKKIRERIEQ 236 (248)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~ 236 (248)
-.+-|.++|+||+|+-|+
T Consensus 26 mla~es~kkqkikedhea 43 (50)
T PF13110_consen 26 MLADESDKKQKIKEDHEA 43 (50)
T ss_pred HHcchHHHHhhhhhhhcc
Confidence 345688999999998664
No 474
>PF11848 DUF3368: Domain of unknown function (DUF3368); InterPro: IPR021799 This domain is functionally uncharacterised. This domain is found in bacteria and archaea. This presumed domain is about 50 amino acids in length.
Probab=22.33 E-value=55 Score=21.49 Aligned_cols=17 Identities=18% Similarity=0.268 Sum_probs=13.8
Q ss_pred eeeeechhhHHHHhhhc
Q psy2083 201 HGFFMDIRLYRKAKSVS 217 (248)
Q Consensus 201 hgyf~~~~ly~~~~~~~ 217 (248)
+||+++.++|+++...+
T Consensus 31 ~g~~is~~l~~~~L~~~ 47 (48)
T PF11848_consen 31 AGFRISPKLIEEILRRA 47 (48)
T ss_pred cCcccCHHHHHHHHHHc
Confidence 59999999999876543
No 475
>PF08608 Wyosine_form: Wyosine base formation; InterPro: IPR013917 The proteins in this entry appear to be important in wyosine base formation in a subset of phenylalanine specific tRNAs. It has been proposed that it participates in converting tRNA(Phe)-m(1)G(37) to tRNA(Phe)-yW []. ; PDB: 2YX0_A 2Z2U_A.
Probab=22.23 E-value=28 Score=24.46 Aligned_cols=10 Identities=50% Similarity=1.072 Sum_probs=2.6
Q ss_pred ccccce-eeee
Q psy2083 196 LRAYMH-GFFM 205 (248)
Q Consensus 196 l~~ymh-gyf~ 205 (248)
+|+||| ||=-
T Consensus 9 vKa~~~~G~s~ 19 (62)
T PF08608_consen 9 VKAYMHVGYSR 19 (62)
T ss_dssp EEE--------
T ss_pred EecCccccccc
Confidence 789998 7643
No 476
>KOG2103|consensus
Probab=22.21 E-value=4.7e+02 Score=27.73 Aligned_cols=78 Identities=17% Similarity=0.198 Sum_probs=48.7
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCceeeeCCCeEEEEECCCC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNYVLSMDSSVVKIWSKDNG 102 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~l~Ssdd~~IKIWD~~tG 102 (248)
..++.+.+.+.+..++++...+ -+.--++|+|.-++..--........+-+.. -+|.|.+.+++||..+|
T Consensus 36 ~k~~~~~~~t~~~rlivsT~~~--------vlAsL~~~tGei~WRqvl~~~~~~~~~~~~~--~iS~dg~~lr~wn~~~g 105 (910)
T KOG2103|consen 36 KKVNFLVYDTKSKRLIVSTEKG--------VLASLNLRTGEIIWRQVLEPKTSGLGVPLTN--TISVDGRYLRSWNTNNG 105 (910)
T ss_pred eeEEEEeecCCCceEEEEeccc--------hhheecccCCcEEEEEeccCCCcccCcceeE--EEccCCcEEEeecCCCc
Confidence 3567777777666677666664 6777799999766643111111111222221 36778889999999999
Q ss_pred CEEEEeec
Q psy2083 103 SLFTCIES 110 (248)
Q Consensus 103 k~~~tie~ 110 (248)
.....++-
T Consensus 106 ~l~~~i~l 113 (910)
T KOG2103|consen 106 ILDWEIEL 113 (910)
T ss_pred eeeeeccc
Confidence 76655554
No 477
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=21.76 E-value=4.5e+02 Score=21.49 Aligned_cols=55 Identities=13% Similarity=0.211 Sum_probs=36.3
Q ss_pred eeEEEEcCCCceeEEecCCCCCCeeEEEEcC-----Cc-eeeeCCCeEEEEECCCCCEEEEee
Q psy2083 53 AFYLYDIRADKPLRVKDHMYGLPIRDIKFHD-----NY-VLSMDSSVVKIWSKDNGSLFTCIE 109 (248)
Q Consensus 53 ~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~-----d~-l~Ssdd~~IKIWD~~tGk~~~tie 109 (248)
++..||+....-+..++-. ..|++|.+-. .. ++.+-...|.-+|.+-.+.+-++.
T Consensus 74 ~llaYDV~~N~d~Fyke~~--DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWtVt 134 (136)
T PF14781_consen 74 SLLAYDVENNSDLFYKEVP--DGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWTVT 134 (136)
T ss_pred eEEEEEcccCchhhhhhCc--cceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEEec
Confidence 7999999998777777655 5688887731 12 445555667777776444444443
No 478
>KOG1916|consensus
Probab=21.75 E-value=1.7e+02 Score=31.53 Aligned_cols=65 Identities=15% Similarity=0.103 Sum_probs=35.4
Q ss_pred CeeEEEEcC-----CCceeEE-ecCCCCCCeeEEEEcCCc------------eeeeC-CCeEEEEECCCCCEEEEeecCC
Q psy2083 52 PAFYLYDIR-----ADKPLRV-KDHMYGLPIRDIKFHDNY------------VLSMD-SSVVKIWSKDNGSLFTCIESGD 112 (248)
Q Consensus 52 G~V~LwDlR-----s~~pl~~-~~h~~~~pI~sI~F~~d~------------l~Ssd-d~~IKIWD~~tGk~~~tie~~h 112 (248)
|.|+.|.+. ..++++. +.|. +.|-.|.-|+.+. |.++| .+-+|+|.....+|+-.+.
T Consensus 257 G~v~f~Qiyi~g~~~~rclhewkphd-~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cll~~~--- 332 (1283)
T KOG1916|consen 257 GSVGFYQIYITGKIVHRCLHEWKPHD-KHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCLLDKL--- 332 (1283)
T ss_pred CccceeeeeeeccccHhhhhccCCCC-CCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhhhhhc---
Confidence 466666543 3344443 3444 2444444465431 44566 5679999998777762222
Q ss_pred CCCeeEEE
Q psy2083 113 QTQFNNLC 120 (248)
Q Consensus 113 ~~~In~l~ 120 (248)
...|+.|.
T Consensus 333 ~d~v~iV~ 340 (1283)
T KOG1916|consen 333 IDGVQIVG 340 (1283)
T ss_pred ccceEeec
Confidence 24455555
No 479
>KOG2063|consensus
Probab=21.43 E-value=5.9e+02 Score=27.19 Aligned_cols=49 Identities=22% Similarity=0.335 Sum_probs=34.5
Q ss_pred eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeE
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKI 137 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I 137 (248)
+++-+++.|-||+..++..++++.+ -..+..++ +.+.+.+++++-.+..
T Consensus 254 lIa~~~~~veI~s~~~~qlvQSI~~--~~~~~~l~-s~~~~i~~~~~~s~v~ 302 (877)
T KOG2063|consen 254 LIALLDRSVEIRSKLDGQLVQSITP--LSNGRSLL-SAHNGIIFVASLSNVW 302 (877)
T ss_pred EEEEccccEEEEeccCHHHhhcccc--ccccceee-ecCCcEEEEEeccceE
Confidence 7777788999999999999999843 23333333 3445788887766533
No 480
>KOG4752|consensus
Probab=21.24 E-value=1.1e+02 Score=17.44 Aligned_cols=21 Identities=19% Similarity=0.412 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHhhcCcc
Q psy2083 223 EEFKKKKIRERIEQERTRGVQ 243 (248)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~r~~ 243 (248)
+.+||++.+.--.+.|.+|-+
T Consensus 3 ~kwrkkrmrrlkrkrr~~~~r 23 (26)
T KOG4752|consen 3 AKWRKKRMRRLKRKRRKMRAR 23 (26)
T ss_pred hHHHHHHHHHHHHHHHHHHhh
Confidence 457787777666666666644
No 481
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=20.99 E-value=6.1e+02 Score=23.14 Aligned_cols=25 Identities=12% Similarity=0.276 Sum_probs=19.7
Q ss_pred CCeeEEEEeCCCCEEEEEeCCCeEE
Q psy2083 114 TQFNNLCHIPESGMMFIANENKKIL 138 (248)
Q Consensus 114 ~~In~l~~~pdsgll~sa~ed~~I~ 138 (248)
..+.++++.|||.+.++-..+++|.
T Consensus 306 ~r~~~v~~~pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 306 GRPRDVAQGPDGALYVSDDSDGKIY 330 (331)
T ss_dssp S-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred CCceEEEEcCCCeEEEEECCCCeEe
Confidence 3799999999999988888788764
No 482
>KOG1027|consensus
Probab=20.90 E-value=3.9e+02 Score=28.41 Aligned_cols=98 Identities=13% Similarity=0.288 Sum_probs=56.8
Q ss_pred CCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCC--eEEEEECCCCCEEEE
Q psy2083 32 PESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSS--VVKIWSKDNGSLFTC 107 (248)
Q Consensus 32 ~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~--~IKIWD~~tGk~~~t 107 (248)
..+|.+.++.-++ ...+-|+.++.-..++.-. .||+..-+.+.. .+...|+ .-+=|+...++-...
T Consensus 105 ssdGi~ysg~k~d--------~~~lvD~~tg~~~~tf~~~--~~~~~~v~~grt~ytv~m~d~~~~~~~wn~t~~dy~a~ 174 (903)
T KOG1027|consen 105 SSDGILYSGSKQD--------IWYLVDPKTGEIDYTFNTA--EPIKQLVYLGRTNYTVTMYDKNVRGKTWNTTFGDYSAQ 174 (903)
T ss_pred CCCCeEEeccccc--------ceEEecCCccceeEEEecC--CcchhheecccceeEEecccCcccCceeeccccchhcc
Confidence 3456666666665 8999999999877776433 489988887765 3333333 345588877776555
Q ss_pred eecCCCCC-eeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 108 IESGDQTQ-FNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 108 ie~~h~~~-In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
..+++... ...+.... .|++++...+..=++|
T Consensus 175 ~~~~~~~~~~~~~~~~~-~g~i~t~D~~~g~~~~ 207 (903)
T KOG1027|consen 175 YPSGVRGEKMSHFHSLG-NGYIVTVDSESGEKLW 207 (903)
T ss_pred CCCccCCceeEEEeecC-CccEEeccCcccceee
Confidence 44322222 22222222 4666665444333333
No 483
>PHA03098 kelch-like protein; Provisional
Probab=20.82 E-value=7.6e+02 Score=23.79 Aligned_cols=89 Identities=13% Similarity=0.096 Sum_probs=42.9
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCC--------CeEEEEECCCCCEEEEeecC-CCCCeeEEE
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDS--------SVVKIWSKDNGSLFTCIESG-DQTQFNNLC 120 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd--------~~IKIWD~~tGk~~~tie~~-h~~~In~l~ 120 (248)
..|..||+.+.+............-.++....+. ++++.+ ..+.++|+.+++ +..+.+- .+..-.+++
T Consensus 406 ~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~-W~~~~~~~~~r~~~~~~ 484 (534)
T PHA03098 406 KTVECFSLNTNKWSKGSPLPISHYGGCAIYHDGKIYVIGGISYIDNIKVYNIVESYNPVTNK-WTELSSLNFPRINASLC 484 (534)
T ss_pred ceEEEEeCCCCeeeecCCCCccccCceEEEECCEEEEECCccCCCCCcccceEEEecCCCCc-eeeCCCCCcccccceEE
Confidence 4688999988754322111000011123333343 554421 238889988764 3333220 011111233
Q ss_pred EeCCCCEEEEEeCC-----CeEEEEEc
Q psy2083 121 HIPESGMMFIANEN-----KKILTYYI 142 (248)
Q Consensus 121 ~~pdsgll~sa~ed-----~~I~~w~I 142 (248)
. -++.+++.|+.+ ..|..|+.
T Consensus 485 ~-~~~~iyv~GG~~~~~~~~~v~~yd~ 510 (534)
T PHA03098 485 I-FNNKIYVVGGDKYEYYINEIEVYDD 510 (534)
T ss_pred E-ECCEEEEEcCCcCCcccceeEEEeC
Confidence 3 377777787765 35667764
No 484
>PF11014 DUF2852: Protein of unknown function (DUF2852); InterPro: IPR021273 This bacterial family of proteins has no known function.
Probab=20.47 E-value=1.1e+02 Score=24.39 Aligned_cols=19 Identities=32% Similarity=0.803 Sum_probs=15.1
Q ss_pred hhhHHHHHHHHHHHHHHHhh
Q psy2083 220 FEFEEFKKKKIRERIEQERT 239 (248)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~ 239 (248)
-||++||+..++ +||+||.
T Consensus 70 ~AFD~YR~~tL~-RLEeEq~ 88 (115)
T PF11014_consen 70 AAFDEYREDTLR-RLEEEQR 88 (115)
T ss_pred hhHHHHHHHHHH-HHHHHHH
Confidence 499999999997 5666664
Done!