Query psy2083
Match_columns 248
No_of_seqs 217 out of 1171
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 23:52:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2083.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2083hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 99.8 7.1E-20 2.4E-24 163.0 18.4 127 6-143 191-320 (321)
2 1got_B GT-beta; complex (GTP-b 99.8 8.4E-19 2.9E-23 156.2 18.9 126 6-141 211-340 (340)
3 2ynn_A Coatomer subunit beta'; 99.8 7.3E-19 2.5E-23 154.3 18.0 157 13-190 5-170 (304)
4 4gqb_B Methylosome protein 50; 99.8 8.7E-19 3E-23 158.4 17.5 129 6-144 154-289 (344)
5 2pbi_B Guanine nucleotide-bind 99.8 1.8E-18 6.1E-23 155.7 18.8 126 6-141 225-354 (354)
6 3ow8_A WD repeat-containing pr 99.8 2.5E-18 8.7E-23 152.9 18.9 128 6-144 149-279 (321)
7 4aow_A Guanine nucleotide-bind 99.8 3.4E-18 1.2E-22 148.5 18.7 128 6-144 200-337 (340)
8 4g56_B MGC81050 protein; prote 99.8 1.2E-18 4.2E-23 157.1 16.2 133 6-148 209-347 (357)
9 2ynn_A Coatomer subunit beta'; 99.8 4.1E-18 1.4E-22 149.5 18.5 128 6-144 40-172 (304)
10 4gqb_B Methylosome protein 50; 99.8 2.8E-18 9.5E-23 155.1 17.6 129 6-144 197-331 (344)
11 1got_B GT-beta; complex (GTP-b 99.8 2.1E-18 7.3E-23 153.6 16.5 129 6-144 169-301 (340)
12 4h5i_A Guanine nucleotide-exch 99.8 2.5E-18 8.6E-23 155.8 16.9 135 6-144 202-343 (365)
13 1vyh_C Platelet-activating fac 99.8 6E-18 2E-22 155.1 18.1 128 6-144 135-265 (410)
14 3lrv_A PRE-mRNA-splicing facto 99.8 1.1E-17 3.7E-22 148.7 17.8 132 6-146 109-246 (343)
15 3iz6_a 40S ribosomal protein R 99.8 1.1E-17 3.9E-22 151.3 17.5 125 10-144 238-375 (380)
16 2xzm_R RACK1; ribosome, transl 99.8 2.2E-17 7.5E-22 147.0 18.9 122 11-143 11-148 (343)
17 3fm0_A Protein CIAO1; WDR39,SG 99.8 1.9E-17 6.4E-22 148.0 17.7 125 11-144 5-136 (345)
18 4ery_A WD repeat-containing pr 99.8 4.6E-17 1.6E-21 141.8 19.6 127 7-144 51-180 (312)
19 3frx_A Guanine nucleotide-bind 99.8 1.9E-17 6.5E-22 146.4 17.2 122 11-143 7-137 (319)
20 1nr0_A Actin interacting prote 99.8 2.5E-17 8.6E-22 158.6 19.1 129 7-144 176-355 (611)
21 1vyh_C Platelet-activating fac 99.8 2.2E-17 7.7E-22 151.3 17.8 126 6-142 261-409 (410)
22 3frx_A Guanine nucleotide-bind 99.8 5.5E-17 1.9E-21 143.5 18.8 127 6-144 92-227 (319)
23 1erj_A Transcriptional repress 99.7 6.1E-17 2.1E-21 147.1 19.2 129 6-145 150-288 (393)
24 4ery_A WD repeat-containing pr 99.7 1.4E-16 4.6E-21 138.8 19.8 129 6-144 92-223 (312)
25 4g56_B MGC81050 protein; prote 99.7 2.1E-17 7.2E-22 149.0 15.0 164 6-190 166-341 (357)
26 2hes_X YDR267CP; beta-propelle 99.7 1.3E-16 4.4E-21 141.7 18.4 123 10-144 3-138 (330)
27 2pbi_B Guanine nucleotide-bind 99.7 1.4E-16 4.7E-21 143.3 18.6 120 14-144 147-271 (354)
28 2w18_A PALB2, fancn, partner a 99.7 9.5E-17 3.2E-21 148.1 17.8 135 7-142 209-355 (356)
29 3bg1_A Protein SEC13 homolog; 99.7 3.7E-17 1.3E-21 144.4 14.4 121 14-144 5-136 (316)
30 3fm0_A Protein CIAO1; WDR39,SG 99.7 9.7E-17 3.3E-21 143.4 16.9 122 12-143 96-224 (345)
31 4gga_A P55CDC, cell division c 99.7 1.8E-16 6.2E-21 144.8 19.0 126 14-149 269-400 (420)
32 3iz6_a 40S ribosomal protein R 99.7 1.2E-16 4.2E-21 144.5 17.5 171 6-192 185-375 (380)
33 2hes_X YDR267CP; beta-propelle 99.7 1.5E-16 5.2E-21 141.2 17.4 123 11-144 97-230 (330)
34 2xzm_R RACK1; ribosome, transl 99.7 3.1E-16 1.1E-20 139.5 19.2 129 6-145 103-245 (343)
35 2pm7_B Protein transport prote 99.7 1.6E-16 5.6E-21 138.8 16.7 119 16-145 4-133 (297)
36 2ymu_A WD-40 repeat protein; u 99.7 2E-16 6.9E-21 148.1 18.1 120 9-141 455-577 (577)
37 3f3f_A Nucleoporin SEH1; struc 99.7 2.6E-16 9E-21 134.9 17.2 120 19-148 8-147 (351)
38 1nr0_A Actin interacting prote 99.7 1.6E-16 5.4E-21 153.0 17.4 124 11-144 137-270 (611)
39 1erj_A Transcriptional repress 99.7 2.5E-16 8.6E-21 143.1 17.9 131 6-146 234-391 (393)
40 4ggc_A P55CDC, cell division c 99.7 4.2E-16 1.4E-20 134.0 18.2 117 22-147 196-318 (318)
41 2pm9_A Protein WEB1, protein t 99.7 2.2E-16 7.7E-21 141.0 16.9 137 6-148 193-341 (416)
42 2ymu_A WD-40 repeat protein; u 99.7 3.5E-16 1.2E-20 146.5 18.9 116 15-143 10-128 (577)
43 3vl1_A 26S proteasome regulato 99.7 2.6E-16 8.9E-21 141.4 16.3 171 6-192 166-365 (420)
44 4aow_A Guanine nucleotide-bind 99.7 9.1E-16 3.1E-20 133.1 19.2 132 11-144 76-246 (340)
45 3dm0_A Maltose-binding peripla 99.7 4E-16 1.4E-20 151.7 18.7 129 6-144 457-592 (694)
46 3zwl_B Eukaryotic translation 99.7 1.2E-15 4E-20 133.0 19.7 127 6-144 202-346 (369)
47 3vu4_A KMHSV2; beta-propeller 99.7 3.3E-16 1.1E-20 140.9 16.7 135 14-157 188-349 (355)
48 2j04_B YDR362CP, TAU91; beta p 99.7 3.4E-17 1.2E-21 157.3 10.6 127 6-142 292-426 (524)
49 3k26_A Polycomb protein EED; W 99.7 5.1E-16 1.7E-20 135.4 17.1 128 7-144 50-192 (366)
50 1sq9_A Antiviral protein SKI8; 99.7 7.6E-16 2.6E-20 137.0 18.5 133 6-144 212-395 (397)
51 3vu4_A KMHSV2; beta-propeller 99.7 1.4E-15 4.6E-20 136.8 20.1 133 6-144 86-271 (355)
52 3lrv_A PRE-mRNA-splicing facto 99.7 1.8E-16 6E-21 140.9 14.1 131 6-144 154-292 (343)
53 2pm7_B Protein transport prote 99.7 7.5E-16 2.6E-20 134.6 17.2 120 13-144 91-238 (297)
54 3odt_A Protein DOA1; ubiquitin 99.7 1.5E-15 5.3E-20 129.9 18.5 123 10-144 172-296 (313)
55 3f3f_A Nucleoporin SEH1; struc 99.7 6.9E-16 2.4E-20 132.3 16.3 123 12-144 101-337 (351)
56 3dm0_A Maltose-binding peripla 99.7 6.7E-16 2.3E-20 150.1 18.0 127 6-143 546-692 (694)
57 2aq5_A Coronin-1A; WD40 repeat 99.7 8E-16 2.7E-20 139.0 17.2 118 16-144 76-207 (402)
58 4a11_B DNA excision repair pro 99.7 1.4E-15 4.9E-20 134.5 18.5 133 6-148 171-369 (408)
59 3gre_A Serine/threonine-protei 99.7 2.4E-16 8.2E-21 143.2 13.7 130 6-144 197-359 (437)
60 3mmy_A MRNA export factor; mRN 99.7 7.5E-16 2.6E-20 134.2 16.2 124 10-144 28-160 (368)
61 3zwl_B Eukaryotic translation 99.7 2.5E-15 8.6E-20 130.9 19.4 129 6-146 15-153 (369)
62 3vl1_A 26S proteasome regulato 99.7 3.4E-16 1.2E-20 140.6 13.9 129 6-144 124-278 (420)
63 1gxr_A ESG1, transducin-like e 99.7 2.7E-15 9.2E-20 129.4 18.9 126 6-144 168-296 (337)
64 3jrp_A Fusion protein of prote 99.7 5.7E-16 1.9E-20 135.8 14.8 124 11-145 1-135 (379)
65 1r5m_A SIR4-interacting protei 99.7 1.6E-15 5.6E-20 134.5 17.8 128 6-144 232-361 (425)
66 3dwl_C Actin-related protein 2 99.7 2.5E-16 8.7E-21 139.7 12.6 176 7-192 39-236 (377)
67 1r5m_A SIR4-interacting protei 99.7 9.2E-16 3.1E-20 136.2 15.4 126 6-143 274-424 (425)
68 1gxr_A ESG1, transducin-like e 99.7 3.8E-15 1.3E-19 128.4 18.7 123 6-142 210-335 (337)
69 1pgu_A Actin interacting prote 99.7 6.2E-16 2.1E-20 144.7 14.8 117 16-143 483-613 (615)
70 4aez_A CDC20, WD repeat-contai 99.7 4.9E-15 1.7E-19 134.2 20.1 129 6-144 118-248 (401)
71 3i2n_A WD repeat-containing pr 99.7 1E-15 3.4E-20 133.4 14.6 129 6-145 195-354 (357)
72 3k26_A Polycomb protein EED; W 99.7 3.7E-15 1.3E-19 129.9 17.8 123 13-144 9-147 (366)
73 3i2n_A WD repeat-containing pr 99.7 1E-15 3.5E-20 133.4 14.0 130 11-145 7-149 (357)
74 3mkq_A Coatomer beta'-subunit; 99.7 2.6E-15 8.8E-20 146.2 18.1 122 12-144 4-128 (814)
75 2aq5_A Coronin-1A; WD40 repeat 99.7 3.2E-15 1.1E-19 135.0 17.5 125 12-146 122-256 (402)
76 3ei3_B DNA damage-binding prot 99.7 7.1E-15 2.4E-19 131.2 18.9 168 6-190 101-280 (383)
77 3gre_A Serine/threonine-protei 99.6 4.7E-15 1.6E-19 134.6 17.6 127 8-144 49-245 (437)
78 3sfz_A APAF-1, apoptotic pepti 99.6 4.9E-15 1.7E-19 151.6 19.4 128 6-144 642-774 (1249)
79 3dwl_C Actin-related protein 2 99.6 9.5E-16 3.2E-20 136.0 12.3 124 13-147 92-239 (377)
80 3bg1_A Protein SEC13 homolog; 99.6 1.5E-15 5.1E-20 134.1 13.2 163 13-190 95-291 (316)
81 1k8k_C P40, ARP2/3 complex 41 99.6 8.2E-15 2.8E-19 128.6 17.7 128 7-143 36-172 (372)
82 3mmy_A MRNA export factor; mRN 99.6 8.6E-15 2.9E-19 127.4 17.4 86 11-107 75-166 (368)
83 4aez_A CDC20, WD repeat-contai 99.6 1.3E-14 4.4E-19 131.4 19.0 163 10-193 206-381 (401)
84 1sq9_A Antiviral protein SKI8; 99.6 4.3E-15 1.5E-19 132.1 15.3 116 21-145 185-323 (397)
85 3dw8_B Serine/threonine-protei 99.6 3.8E-15 1.3E-19 134.6 14.8 123 13-145 73-259 (447)
86 1k8k_C P40, ARP2/3 complex 41 99.6 1.4E-14 4.7E-19 127.2 17.9 129 7-144 80-233 (372)
87 3ei3_B DNA damage-binding prot 99.6 1.7E-14 5.7E-19 128.7 18.7 125 9-143 61-193 (383)
88 3v7d_B Cell division control p 99.6 1.6E-14 5.3E-19 132.2 18.9 124 13-148 113-240 (464)
89 4e54_B DNA damage-binding prot 99.6 3.9E-15 1.3E-19 136.8 14.7 118 20-147 162-285 (435)
90 3odt_A Protein DOA1; ubiquitin 99.6 2.2E-14 7.6E-19 122.6 18.4 122 10-144 131-255 (313)
91 3jrp_A Fusion protein of prote 99.6 1.4E-14 5E-19 126.8 17.4 128 7-144 85-240 (379)
92 2xyi_A Probable histone-bindin 99.6 8.3E-15 2.8E-19 134.6 16.4 122 12-144 268-410 (430)
93 4e54_B DNA damage-binding prot 99.6 6.5E-15 2.2E-19 135.3 15.4 121 13-143 111-239 (435)
94 4h5i_A Guanine nucleotide-exch 99.6 4.4E-15 1.5E-19 134.3 13.7 163 6-190 162-341 (365)
95 3mkq_A Coatomer beta'-subunit; 99.6 1.1E-14 3.6E-19 141.9 17.1 128 6-144 40-172 (814)
96 3v7d_B Cell division control p 99.6 3E-14 1E-18 130.3 18.9 126 6-144 295-421 (464)
97 3dw8_B Serine/threonine-protei 99.6 2E-14 6.8E-19 129.8 16.7 118 16-144 171-315 (447)
98 2xyi_A Probable histone-bindin 99.6 2E-14 6.9E-19 132.0 16.9 123 15-147 225-356 (430)
99 2vdu_B TRNA (guanine-N(7)-)-me 99.6 1.9E-14 6.4E-19 132.5 16.0 117 16-142 190-337 (450)
100 4gq1_A NUP37; propeller, trans 99.6 1E-14 3.6E-19 132.8 14.2 115 20-144 134-286 (393)
101 2j04_B YDR362CP, TAU91; beta p 99.6 2.7E-14 9.4E-19 137.0 16.4 118 16-144 202-342 (524)
102 2oaj_A Protein SNI1; WD40 repe 99.6 3.8E-14 1.3E-18 143.7 18.0 128 6-144 84-242 (902)
103 4gq1_A NUP37; propeller, trans 99.6 6E-15 2E-19 134.4 10.9 109 27-144 93-218 (393)
104 2vdu_B TRNA (guanine-N(7)-)-me 99.6 4E-14 1.4E-18 130.3 16.4 124 10-144 136-271 (450)
105 3sfz_A APAF-1, apoptotic pepti 99.6 6.4E-14 2.2E-18 143.3 19.2 118 16-144 610-732 (1249)
106 2oit_A Nucleoporin 214KDA; NH2 99.6 7.4E-15 2.5E-19 137.0 11.0 114 22-143 92-222 (434)
107 2oaj_A Protein SNI1; WD40 repe 99.6 5.1E-14 1.7E-18 142.8 17.9 113 20-144 15-129 (902)
108 2pm9_A Protein WEB1, protein t 99.6 2.4E-14 8E-19 127.8 13.7 115 21-144 164-294 (416)
109 2j04_A TAU60, YPL007P, hypothe 99.6 2.5E-14 8.6E-19 139.4 14.3 111 22-144 85-211 (588)
110 4a11_B DNA excision repair pro 99.6 8.4E-14 2.9E-18 123.1 16.5 127 7-144 29-175 (408)
111 1l0q_A Surface layer protein; 99.6 1.7E-13 5.9E-18 122.0 18.4 126 6-144 17-147 (391)
112 1yfq_A Cell cycle arrest prote 99.6 4.8E-14 1.6E-18 122.6 14.1 121 11-144 141-282 (342)
113 1yfq_A Cell cycle arrest prote 99.6 9.2E-14 3.2E-18 120.8 15.7 115 18-144 7-131 (342)
114 1pgu_A Actin interacting prote 99.6 1.8E-13 6.2E-18 128.0 18.6 123 10-144 149-283 (615)
115 4ggc_A P55CDC, cell division c 99.5 5.1E-13 1.7E-17 114.6 19.6 128 7-144 51-181 (318)
116 3jro_A Fusion protein of prote 99.5 7.6E-14 2.6E-18 138.0 16.0 120 15-145 3-133 (753)
117 2ovr_B FBW7, F-BOX/WD repeat p 99.5 1.8E-13 6.2E-18 125.1 17.3 127 6-144 304-442 (445)
118 2ovr_B FBW7, F-BOX/WD repeat p 99.5 3.3E-13 1.1E-17 123.3 18.6 124 6-144 144-268 (445)
119 4gga_A P55CDC, cell division c 99.5 5.2E-13 1.8E-17 121.8 19.8 128 7-144 131-261 (420)
120 1p22_A F-BOX/WD-repeat protein 99.5 2.5E-13 8.5E-18 124.2 17.0 124 6-144 158-285 (435)
121 2j04_A TAU60, YPL007P, hypothe 99.5 2.4E-13 8.4E-18 132.5 17.6 120 13-144 117-254 (588)
122 1p22_A F-BOX/WD-repeat protein 99.5 3E-13 1E-17 123.7 17.2 166 7-193 239-415 (435)
123 1l0q_A Surface layer protein; 99.5 6E-13 2.1E-17 118.4 18.6 126 6-144 59-189 (391)
124 3jro_A Fusion protein of prote 99.5 2.9E-13 1E-17 133.8 16.7 127 8-144 84-238 (753)
125 2w18_A PALB2, fancn, partner a 99.5 8.8E-13 3E-17 121.6 17.1 94 49-144 200-314 (356)
126 3bws_A Protein LP49; two-domai 99.5 2.1E-12 7.1E-17 116.5 18.3 127 5-144 287-432 (433)
127 3bws_A Protein LP49; two-domai 99.5 1.1E-12 3.7E-17 118.4 16.0 133 6-144 239-390 (433)
128 2hqs_A Protein TOLB; TOLB, PAL 99.3 1.3E-10 4.6E-15 106.9 17.9 123 11-143 168-299 (415)
129 1pby_B Quinohemoprotein amine 99.3 1.4E-10 4.9E-15 99.8 15.8 128 6-144 16-163 (337)
130 3u4y_A Uncharacterized protein 99.3 2.8E-10 9.7E-15 98.8 17.7 128 5-144 24-160 (331)
131 3vgz_A Uncharacterized protein 99.3 2.5E-10 8.5E-15 99.4 17.3 130 5-144 73-215 (353)
132 2oit_A Nucleoporin 214KDA; NH2 99.3 8.4E-11 2.9E-15 109.5 14.9 115 21-146 148-280 (434)
133 3vgz_A Uncharacterized protein 99.2 1.4E-09 4.7E-14 94.7 18.9 131 5-144 115-262 (353)
134 1pby_B Quinohemoprotein amine 99.2 7.7E-10 2.6E-14 95.2 17.2 124 6-144 120-310 (337)
135 3u4y_A Uncharacterized protein 99.2 1.2E-09 3.9E-14 94.9 16.5 127 5-144 112-252 (331)
136 1ri6_A Putative isomerase YBHE 99.2 3.6E-10 1.2E-14 97.5 13.1 119 13-144 30-160 (343)
137 2ojh_A Uncharacterized protein 99.2 8.9E-10 3E-14 92.2 15.1 125 6-144 27-160 (297)
138 1nir_A Nitrite reductase; hemo 99.1 1.4E-09 4.7E-14 104.3 18.1 127 6-144 164-311 (543)
139 2hqs_A Protein TOLB; TOLB, PAL 99.1 1.9E-09 6.4E-14 99.1 17.2 127 6-144 208-344 (415)
140 1xfd_A DIP, dipeptidyl aminope 99.1 5.6E-10 1.9E-14 107.6 14.1 127 6-134 42-193 (723)
141 1ri6_A Putative isomerase YBHE 99.1 1.6E-09 5.4E-14 93.4 14.9 124 10-144 71-209 (343)
142 3o4h_A Acylamino-acid-releasin 99.1 3.3E-10 1.1E-14 107.4 11.3 124 7-142 138-274 (582)
143 1jmx_B Amine dehydrogenase; ox 99.1 1.5E-09 5.1E-14 94.1 13.4 127 6-144 26-175 (349)
144 1nir_A Nitrite reductase; hemo 99.1 2.7E-09 9.2E-14 102.3 15.9 128 6-144 205-355 (543)
145 2ojh_A Uncharacterized protein 99.0 1.6E-09 5.3E-14 90.7 10.9 92 51-144 21-117 (297)
146 2ecf_A Dipeptidyl peptidase IV 99.0 2E-09 6.8E-14 104.3 12.4 99 25-135 111-230 (741)
147 1jmx_B Amine dehydrogenase; ox 99.0 3.5E-09 1.2E-13 91.7 11.8 108 29-144 6-134 (349)
148 2z3z_A Dipeptidyl aminopeptida 99.0 1.6E-09 5.4E-14 104.6 10.5 97 23-132 82-199 (706)
149 1z68_A Fibroblast activation p 99.0 1.7E-09 5.8E-14 104.7 10.6 126 6-134 41-189 (719)
150 2ecf_A Dipeptidyl peptidase IV 99.0 4.4E-09 1.5E-13 101.8 13.5 117 23-144 37-181 (741)
151 3hfq_A Uncharacterized protein 99.0 2.1E-08 7.3E-13 87.9 16.3 130 7-144 69-218 (347)
152 1k32_A Tricorn protease; prote 99.0 7.3E-09 2.5E-13 105.6 14.7 122 7-142 365-500 (1045)
153 3hfq_A Uncharacterized protein 98.9 8E-09 2.7E-13 90.7 12.9 129 5-143 22-170 (347)
154 3scy_A Hypothetical bacterial 98.9 3.7E-08 1.3E-12 87.0 17.0 112 23-143 211-336 (361)
155 2z3z_A Dipeptidyl aminopeptida 98.9 1.2E-08 4.2E-13 98.3 12.9 128 6-144 106-293 (706)
156 3scy_A Hypothetical bacterial 98.9 5E-08 1.7E-12 86.2 15.2 112 25-143 157-290 (361)
157 3fvz_A Peptidyl-glycine alpha- 98.8 1.1E-07 3.8E-12 84.1 16.8 130 6-143 171-321 (329)
158 1jof_A Carboxy-CIS,CIS-muconat 98.8 4.9E-08 1.7E-12 87.3 14.0 130 5-143 20-175 (365)
159 1k32_A Tricorn protease; prote 98.8 2.3E-08 7.9E-13 101.9 13.2 109 24-144 339-461 (1045)
160 4a5s_A Dipeptidyl peptidase 4 98.8 2.6E-08 8.9E-13 97.8 11.2 137 6-145 41-203 (740)
161 1xfd_A DIP, dipeptidyl aminope 98.8 5.7E-09 1.9E-13 100.6 6.0 110 23-144 17-143 (723)
162 1q7f_A NHL, brain tumor CG1071 98.7 7.3E-07 2.5E-11 76.1 18.1 131 6-148 147-284 (286)
163 1z68_A Fibroblast activation p 98.7 1.6E-08 5.6E-13 97.8 8.1 107 26-144 19-139 (719)
164 1jof_A Carboxy-CIS,CIS-muconat 98.7 5.8E-07 2E-11 80.3 17.5 115 22-143 144-290 (365)
165 3o4h_A Acylamino-acid-releasin 98.7 1.2E-07 4.2E-12 89.6 12.7 105 25-143 112-226 (582)
166 1q7f_A NHL, brain tumor CG1071 98.7 1.4E-06 4.9E-11 74.2 17.8 125 6-141 105-235 (286)
167 3azo_A Aminopeptidase; POP fam 98.6 1.8E-07 6.3E-12 89.4 12.5 119 22-142 129-270 (662)
168 1xip_A Nucleoporin NUP159; bet 98.6 8.3E-07 2.8E-11 82.5 14.5 102 22-143 88-190 (388)
169 3fvz_A Peptidyl-glycine alpha- 98.5 3.5E-06 1.2E-10 74.3 17.0 130 5-143 73-226 (329)
170 3e5z_A Putative gluconolactona 98.5 5.2E-06 1.8E-10 71.3 16.2 102 22-135 171-278 (296)
171 4a5s_A Dipeptidyl peptidase 4 98.5 7.4E-07 2.5E-11 87.4 11.5 109 23-144 17-141 (740)
172 3no2_A Uncharacterized protein 98.5 2.5E-06 8.6E-11 74.5 13.5 99 34-141 5-105 (276)
173 3dsm_A Uncharacterized protein 98.5 5E-06 1.7E-10 73.7 15.5 128 5-144 109-253 (328)
174 1qks_A Cytochrome CD1 nitrite 98.4 8.6E-06 3E-10 78.8 18.3 126 6-143 182-372 (567)
175 2gop_A Trilobed protease; beta 98.4 3.7E-06 1.3E-10 73.2 14.2 110 24-143 60-206 (347)
176 3dsm_A Uncharacterized protein 98.4 5.2E-06 1.8E-10 73.5 15.4 127 5-143 68-211 (328)
177 3pe7_A Oligogalacturonate lyas 98.4 3.3E-06 1.1E-10 74.5 13.6 125 6-142 65-223 (388)
178 3no2_A Uncharacterized protein 98.4 6.2E-06 2.1E-10 72.0 14.9 128 3-142 58-193 (276)
179 2dg1_A DRP35, lactonase; beta 98.4 1.3E-05 4.4E-10 69.6 16.7 131 6-143 71-212 (333)
180 2oiz_A Aromatic amine dehydrog 98.4 2.5E-06 8.5E-11 77.0 12.5 94 28-126 259-360 (361)
181 2xdw_A Prolyl endopeptidase; a 98.4 2.5E-06 8.6E-11 83.2 13.3 116 24-144 126-268 (710)
182 2oiz_A Aromatic amine dehydrog 98.4 5.2E-06 1.8E-10 74.8 14.5 132 5-142 35-180 (361)
183 3pe7_A Oligogalacturonate lyas 98.4 5E-06 1.7E-10 73.3 13.6 117 6-130 15-141 (388)
184 2bkl_A Prolyl endopeptidase; m 98.4 2E-06 6.9E-11 83.7 11.4 115 23-142 121-257 (695)
185 3azo_A Aminopeptidase; POP fam 98.3 2.1E-06 7.3E-11 81.9 11.2 119 22-143 187-322 (662)
186 2dg1_A DRP35, lactonase; beta 98.3 2.7E-05 9.3E-10 67.5 17.1 113 10-133 33-154 (333)
187 1pjx_A Dfpase, DIISOPROPYLFLUO 98.3 2.6E-05 9E-10 66.6 16.4 115 23-145 172-300 (314)
188 3c5m_A Oligogalacturonate lyas 98.3 1.2E-05 4E-10 70.6 14.4 130 6-143 173-328 (396)
189 3e5z_A Putative gluconolactona 98.3 2.5E-05 8.5E-10 67.0 15.6 124 6-143 55-201 (296)
190 3c5m_A Oligogalacturonate lyas 98.2 2.4E-06 8.3E-11 75.1 6.6 131 6-144 15-177 (396)
191 1xip_A Nucleoporin NUP159; bet 98.2 1.3E-05 4.6E-10 74.4 11.8 106 23-144 38-155 (388)
192 1rwi_B Serine/threonine-protei 98.1 4.2E-05 1.4E-09 64.0 13.4 112 23-144 150-264 (270)
193 1qks_A Cytochrome CD1 nitrite 98.1 3.8E-05 1.3E-09 74.3 14.8 100 34-144 166-275 (567)
194 2z2n_A Virginiamycin B lyase; 98.0 0.00044 1.5E-08 58.0 18.1 125 6-142 125-253 (299)
195 3g4e_A Regucalcin; six bladed 98.0 8.2E-05 2.8E-09 64.5 13.8 102 23-133 149-261 (297)
196 3dr2_A Exported gluconolactona 98.0 0.00019 6.6E-09 62.2 15.6 127 6-142 174-304 (305)
197 1yr2_A Prolyl oligopeptidase; 97.9 6.3E-05 2.2E-09 73.8 12.4 115 24-143 164-302 (741)
198 2z2n_A Virginiamycin B lyase; 97.9 0.00098 3.3E-08 55.9 17.6 126 6-142 41-169 (299)
199 3sjl_D Methylamine dehydrogena 97.9 0.00031 1E-08 65.2 15.2 128 5-137 63-212 (386)
200 2xdw_A Prolyl endopeptidase; a 97.9 0.00019 6.6E-09 69.8 14.4 135 6-144 156-320 (710)
201 1rwi_B Serine/threonine-protei 97.8 0.00039 1.3E-08 58.0 14.0 110 23-142 108-220 (270)
202 3sjl_D Methylamine dehydrogena 97.8 0.00017 5.9E-09 66.9 12.7 112 28-145 38-170 (386)
203 2iwa_A Glutamine cyclotransfer 97.8 0.00069 2.3E-08 59.7 16.0 126 10-144 8-135 (266)
204 2gop_A Trilobed protease; beta 97.8 0.00031 1.1E-08 60.8 13.4 104 31-143 223-330 (347)
205 3dr2_A Exported gluconolactona 97.8 0.00059 2E-08 59.1 14.7 110 22-143 85-223 (305)
206 2qc5_A Streptogramin B lactona 97.8 0.0021 7E-08 53.9 17.6 126 6-142 130-258 (300)
207 1pjx_A Dfpase, DIISOPROPYLFLUO 97.8 0.00065 2.2E-08 57.8 14.6 126 6-143 51-206 (314)
208 2qe8_A Uncharacterized protein 97.8 0.00063 2.2E-08 60.2 14.9 116 22-141 66-223 (343)
209 3g4e_A Regucalcin; six bladed 97.7 0.0014 4.9E-08 56.5 16.5 122 6-142 40-178 (297)
210 2hz6_A Endoplasmic reticulum t 97.7 3.8E-06 1.3E-10 76.2 -0.2 130 6-153 24-156 (369)
211 1kb0_A Quinohemoprotein alcoho 97.7 0.0008 2.7E-08 66.0 16.1 96 52-149 457-572 (677)
212 2mad_H Methylamine dehydrogena 97.7 0.00099 3.4E-08 60.6 15.5 130 4-142 50-194 (373)
213 2ghs_A AGR_C_1268P; regucalcin 97.7 0.0017 6E-08 57.0 16.7 102 23-134 179-292 (326)
214 2qc5_A Streptogramin B lactona 97.7 0.0037 1.3E-07 52.3 17.6 110 23-142 62-174 (300)
215 2bkl_A Prolyl endopeptidase; m 97.6 0.00062 2.1E-08 66.1 12.9 116 26-144 171-304 (695)
216 2mad_H Methylamine dehydrogena 97.6 0.0013 4.3E-08 59.9 14.1 106 31-144 29-156 (373)
217 2iwa_A Glutamine cyclotransfer 97.5 0.0053 1.8E-07 54.0 17.2 130 5-146 90-239 (266)
218 3hrp_A Uncharacterized protein 97.5 0.0035 1.2E-07 57.4 16.5 112 23-144 219-354 (409)
219 1kb0_A Quinohemoprotein alcoho 97.5 0.0023 8E-08 62.7 15.9 51 92-144 457-507 (677)
220 3c75_H MADH, methylamine dehyd 97.5 0.0013 4.6E-08 61.5 13.2 129 5-138 103-252 (426)
221 3iuj_A Prolyl endopeptidase; h 97.4 0.0011 3.6E-08 64.7 12.1 116 22-143 128-267 (693)
222 2hz6_A Endoplasmic reticulum t 97.4 1E-05 3.5E-10 73.3 -2.2 91 52-152 102-198 (369)
223 2ghs_A AGR_C_1268P; regucalcin 97.4 0.0051 1.8E-07 54.0 15.4 98 24-132 50-152 (326)
224 3hrp_A Uncharacterized protein 97.4 0.0031 1E-07 57.9 14.2 128 5-142 156-296 (409)
225 3mbr_X Glutamine cyclotransfer 97.4 0.012 4.2E-07 51.1 17.3 122 12-145 10-134 (243)
226 3nok_A Glutaminyl cyclase; bet 97.4 0.0051 1.7E-07 54.4 15.0 120 11-144 43-164 (268)
227 3c75_H MADH, methylamine dehyd 97.4 0.0015 5.1E-08 61.2 12.1 91 52-145 99-210 (426)
228 1yiq_A Quinohemoprotein alcoho 97.4 0.0043 1.5E-07 60.9 15.8 78 51-130 454-534 (689)
229 3nol_A Glutamine cyclotransfer 97.4 0.0071 2.4E-07 53.2 15.5 123 11-145 31-156 (262)
230 3q7m_A Lipoprotein YFGL, BAMB; 97.3 0.0066 2.3E-07 53.6 15.4 121 6-141 254-375 (376)
231 2qe8_A Uncharacterized protein 97.3 0.0061 2.1E-07 53.8 14.8 114 23-143 17-153 (343)
232 1yiq_A Quinohemoprotein alcoho 97.3 0.0043 1.5E-07 60.9 15.2 52 91-144 454-505 (689)
233 3nol_A Glutamine cyclotransfer 97.3 0.0066 2.3E-07 53.4 14.6 122 4-137 110-249 (262)
234 1mda_H Methylamine dehydrogena 97.3 0.0013 4.6E-08 60.2 10.6 87 53-142 47-156 (368)
235 2ece_A 462AA long hypothetical 97.2 0.0072 2.5E-07 57.3 15.1 141 4-144 167-352 (462)
236 3mbr_X Glutamine cyclotransfer 97.2 0.011 3.7E-07 51.4 15.1 122 4-137 88-228 (243)
237 1mda_H Methylamine dehydrogena 97.2 0.00096 3.3E-08 61.2 8.3 127 5-142 50-192 (368)
238 1yr2_A Prolyl oligopeptidase; 97.1 0.015 5E-07 56.8 16.7 113 24-143 269-392 (741)
239 3q7m_A Lipoprotein YFGL, BAMB; 97.1 0.012 4E-07 51.9 14.1 123 6-143 68-206 (376)
240 2ece_A 462AA long hypothetical 97.1 0.0088 3E-07 56.7 13.8 114 26-142 141-287 (462)
241 3nok_A Glutaminyl cyclase; bet 97.0 0.0093 3.2E-07 52.7 12.8 118 4-133 119-254 (268)
242 1npe_A Nidogen, entactin; glyc 97.0 0.055 1.9E-06 45.4 16.7 110 24-142 37-153 (267)
243 1npe_A Nidogen, entactin; glyc 96.9 0.14 4.6E-06 43.0 18.9 112 23-143 79-197 (267)
244 1fwx_A Nitrous oxide reductase 96.7 0.013 4.4E-07 57.2 12.1 133 6-144 180-361 (595)
245 1kv9_A Type II quinohemoprotei 96.7 0.06 2E-06 52.5 16.7 102 51-156 437-564 (668)
246 1fwx_A Nitrous oxide reductase 96.6 0.012 4.1E-07 57.5 11.2 120 6-135 259-409 (595)
247 3hxj_A Pyrrolo-quinoline quino 96.6 0.029 1E-06 47.7 12.5 119 6-141 122-241 (330)
248 1flg_A Protein (quinoprotein e 96.6 0.025 8.6E-07 54.5 13.3 76 51-130 465-545 (582)
249 3hxj_A Pyrrolo-quinoline quino 96.6 0.048 1.6E-06 46.3 13.7 123 6-144 200-324 (330)
250 2ad6_A Methanol dehydrogenase 96.6 0.017 5.9E-07 55.4 11.9 78 51-132 443-525 (571)
251 2ad6_A Methanol dehydrogenase 96.6 0.026 9E-07 54.1 13.1 52 91-144 443-494 (571)
252 1flg_A Protein (quinoprotein e 96.4 0.042 1.4E-06 52.9 13.4 51 91-143 465-515 (582)
253 2fp8_A Strictosidine synthase; 96.3 0.088 3E-06 45.5 14.0 110 24-143 81-215 (322)
254 1ijq_A LDL receptor, low-densi 96.2 0.55 1.9E-05 40.9 18.6 126 6-142 15-150 (316)
255 1kv9_A Type II quinohemoprotei 96.2 0.11 3.8E-06 50.6 15.2 51 91-143 437-487 (668)
256 3iuj_A Prolyl endopeptidase; h 96.2 0.095 3.2E-06 50.9 14.7 110 23-142 234-357 (693)
257 3pbp_A Nucleoporin NUP82; beta 95.8 0.13 4.4E-06 48.5 13.1 107 24-140 67-208 (452)
258 3tc9_A Hypothetical hydrolase; 95.8 0.24 8.1E-06 45.6 14.7 130 4-142 162-299 (430)
259 3amr_A 3-phytase; beta-propell 95.6 0.32 1.1E-05 44.5 14.5 165 6-186 55-257 (355)
260 1w6s_A Methanol dehydrogenase 95.6 0.21 7.2E-06 48.4 14.1 60 91-154 452-511 (599)
261 2fp8_A Strictosidine synthase; 95.5 0.35 1.2E-05 41.6 14.0 110 24-144 186-313 (322)
262 2p4o_A Hypothetical protein; p 95.4 0.88 3E-05 39.0 16.5 121 9-142 20-145 (306)
263 3qqz_A Putative uncharacterize 95.4 0.6 2.1E-05 40.4 15.1 109 22-140 120-249 (255)
264 2xe4_A Oligopeptidase B; hydro 95.3 0.14 4.9E-06 50.4 12.1 113 24-142 175-302 (751)
265 3sov_A LRP-6, low-density lipo 95.3 1.1 3.6E-05 39.5 16.6 142 24-182 80-228 (318)
266 3v65_B Low-density lipoprotein 95.2 1.1 3.7E-05 40.3 16.9 111 23-142 116-232 (386)
267 3v64_C Agrin; beta propeller, 94.8 2 6.9E-05 37.9 17.5 145 23-184 116-267 (349)
268 1w6s_A Methanol dehydrogenase 94.7 0.62 2.1E-05 45.1 14.7 73 51-127 452-529 (599)
269 3qqz_A Putative uncharacterize 94.7 1.3 4.5E-05 38.2 15.3 114 22-143 26-150 (255)
270 3v65_B Low-density lipoprotein 94.7 1.5 5.1E-05 39.4 16.2 143 24-182 160-308 (386)
271 3p5b_L Low density lipoprotein 94.7 2.4 8.3E-05 38.3 18.3 145 23-184 159-312 (400)
272 4a0p_A LRP6, LRP-6, low-densit 94.5 2.4 8.2E-05 41.1 18.3 145 23-185 80-230 (628)
273 3v64_C Agrin; beta propeller, 94.5 2.4 8.2E-05 37.4 18.8 111 23-142 73-189 (349)
274 2p4o_A Hypothetical protein; p 94.3 0.22 7.7E-06 42.8 9.6 98 25-135 171-279 (306)
275 2xbg_A YCF48-like protein; pho 94.3 1.5 5.2E-05 38.2 15.0 115 23-149 205-326 (327)
276 3tc9_A Hypothetical hydrolase; 93.7 0.69 2.4E-05 42.4 12.1 107 24-142 138-255 (430)
277 1ijq_A LDL receptor, low-densi 93.7 3.1 0.00011 36.0 18.1 143 23-182 77-228 (316)
278 4hw6_A Hypothetical protein, I 93.7 1.8 6.2E-05 39.7 14.9 131 4-143 165-303 (433)
279 3amr_A 3-phytase; beta-propell 92.8 2.7 9.2E-05 38.3 14.3 111 23-143 128-262 (355)
280 2xe4_A Oligopeptidase B; hydro 92.5 1.6 5.4E-05 42.8 13.4 115 26-143 224-351 (751)
281 3m0c_C LDL receptor, low-densi 92.0 9.7 0.00033 38.0 18.4 146 23-185 471-625 (791)
282 2p9w_A MAL S 1 allergenic prot 91.9 3.8 0.00013 37.0 14.0 90 52-143 100-214 (334)
283 3kya_A Putative phosphatase; s 91.9 4.4 0.00015 38.4 15.1 132 5-141 166-338 (496)
284 1k3i_A Galactose oxidase precu 91.6 2 6.7E-05 41.2 12.6 89 53-142 220-321 (656)
285 2xbg_A YCF48-like protein; pho 91.6 6.1 0.00021 34.2 14.8 104 22-137 162-272 (327)
286 3p5b_L Low density lipoprotein 91.3 8 0.00027 34.8 18.6 111 23-142 112-232 (400)
287 4a2l_A BT_4663, two-component 90.9 7.2 0.00025 37.9 15.9 106 23-141 215-336 (795)
288 3a9g_A Putative uncharacterize 90.5 8.6 0.00029 34.0 15.0 110 13-133 20-154 (354)
289 2ism_A Putative oxidoreductase 90.2 9.3 0.00032 33.7 15.4 109 13-133 22-154 (352)
290 4a2l_A BT_4663, two-component 89.7 9.3 0.00032 37.1 15.6 108 24-141 311-433 (795)
291 4hw6_A Hypothetical protein, I 89.6 5.5 0.00019 36.4 13.2 110 25-141 230-371 (433)
292 3sov_A LRP-6, low-density lipo 89.6 7.8 0.00027 33.8 13.7 109 24-142 36-152 (318)
293 3kya_A Putative phosphatase; s 89.2 5.2 0.00018 37.9 12.9 111 24-143 140-277 (496)
294 1tl2_A L10, protein (tachylect 88.9 3.1 0.00011 35.8 10.1 115 23-151 41-169 (236)
295 3sre_A PON1, serum paraoxonase 88.9 7.6 0.00026 35.0 13.3 114 24-144 113-252 (355)
296 1n7d_A LDL receptor, low-densi 88.3 0.88 3E-05 44.6 7.1 110 23-141 406-525 (699)
297 3s94_A LRP-6, low-density lipo 88.2 19 0.00064 34.6 17.9 146 23-185 392-544 (619)
298 3m0c_C LDL receptor, low-densi 87.9 23 0.00079 35.3 17.6 111 23-142 424-544 (791)
299 3s94_A LRP-6, low-density lipo 87.8 20 0.00068 34.4 18.3 145 23-184 84-235 (619)
300 3ei3_A DNA damage-binding prot 87.4 5.8 0.0002 41.3 12.9 109 50-159 862-979 (1158)
301 1n7d_A LDL receptor, low-densi 85.7 3 0.0001 40.8 9.3 140 26-182 456-604 (699)
302 3pbp_A Nucleoporin NUP82; beta 85.6 21 0.00072 33.5 14.4 98 53-150 42-164 (452)
303 1cru_A Protein (soluble quinop 85.5 22 0.00076 32.7 15.0 114 11-133 16-163 (454)
304 2p9w_A MAL S 1 allergenic prot 83.6 24 0.00083 31.6 13.9 108 23-137 13-161 (334)
305 3ei3_A DNA damage-binding prot 83.3 18 0.00061 37.7 14.2 91 53-146 493-593 (1158)
306 4gq2_M Nucleoporin NUP120; bet 82.9 7.7 0.00026 39.4 11.1 39 23-69 236-274 (950)
307 1k3i_A Galactose oxidase precu 82.6 3.7 0.00013 39.3 8.3 75 26-108 246-329 (656)
308 3v9f_A Two-component system se 81.8 28 0.00094 33.7 14.3 107 23-140 407-520 (781)
309 3das_A Putative oxidoreductase 81.6 29 0.00099 31.0 14.0 112 13-133 23-159 (347)
310 3sbq_A Nitrous-oxide reductase 81.3 19 0.00066 35.1 12.5 80 13-101 315-408 (638)
311 4a0p_A LRP6, LRP-6, low-densit 80.5 42 0.0014 32.2 17.5 109 23-141 37-152 (628)
312 4a9v_A PHOX; hydrolase, beta-p 79.1 7.1 0.00024 37.9 8.8 59 76-134 478-551 (592)
313 3v9f_A Two-component system se 77.2 54 0.0018 31.6 14.8 107 24-141 212-339 (781)
314 3lcn_C MRNA transport factor G 69.6 3.2 0.00011 23.7 2.2 14 226-239 7-20 (29)
315 3zwu_A Alkaline phosphatase PH 66.1 20 0.00069 34.7 8.6 58 77-134 479-551 (592)
316 2ism_A Putative oxidoreductase 65.7 21 0.00073 31.2 8.1 65 77-143 34-113 (352)
317 2g8s_A Glucose/sorbosone dehyd 64.9 71 0.0024 27.8 11.9 103 23-133 18-149 (353)
318 3a9g_A Putative uncharacterize 63.9 24 0.00081 31.1 8.1 67 76-143 31-113 (354)
319 4gq2_M Nucleoporin NUP120; bet 62.3 16 0.00056 37.0 7.5 35 75-109 237-274 (950)
320 3sre_A PON1, serum paraoxonase 60.1 94 0.0032 27.7 13.7 135 13-156 155-308 (355)
321 4fhn_B Nucleoporin NUP120; pro 58.9 9.8 0.00034 39.3 5.2 39 23-69 238-276 (1139)
322 3mez_B Mannose-specific lectin 57.5 54 0.0018 24.0 9.2 49 52-101 34-84 (113)
323 2be1_A Serine/threonine-protei 54.6 23 0.00078 31.7 6.3 91 52-142 20-128 (339)
324 3f7f_A Nucleoporin NUP120; nuc 49.2 26 0.00088 34.9 6.1 38 24-70 222-259 (729)
325 3f7f_A Nucleoporin NUP120; nuc 48.0 25 0.00085 35.0 5.8 38 73-110 221-259 (729)
326 3das_A Putative oxidoreductase 47.6 89 0.0031 27.8 9.1 67 76-142 34-114 (347)
327 2be1_A Serine/threonine-protei 44.3 1.7E+02 0.0058 25.9 11.3 58 86-145 216-298 (339)
328 1tl2_A L10, protein (tachylect 42.9 30 0.001 29.6 4.8 68 75-144 42-116 (236)
329 1cru_A Protein (soluble quinop 38.0 1.1E+02 0.0037 28.0 8.2 56 77-132 30-98 (454)
330 4fhn_B Nucleoporin NUP120; pro 33.1 32 0.0011 35.4 4.1 34 76-109 240-276 (1139)
331 1zvt_A Topoisomerase IV subuni 32.4 2.2E+02 0.0076 23.8 9.0 76 73-150 83-169 (256)
332 2xn4_A Kelch-like protein 2; s 32.0 2.1E+02 0.0071 23.4 10.5 89 52-142 173-274 (302)
333 3ott_A Two-component system se 29.7 3.7E+02 0.013 25.5 13.8 105 23-142 22-128 (758)
334 2wg3_C Hedgehog-interacting pr 28.5 3.4E+02 0.012 24.8 14.7 105 23-135 14-160 (463)
335 3ott_A Two-component system se 28.3 3.9E+02 0.013 25.3 14.1 80 54-137 538-620 (758)
336 2vpj_A Kelch-like protein 12; 28.0 2.4E+02 0.0083 22.9 13.7 90 52-143 175-277 (301)
337 3zwl_E Eukaryotic translation 26.6 53 0.0018 21.3 2.9 21 221-242 23-43 (50)
338 3sbq_A Nitrous-oxide reductase 24.9 3.8E+02 0.013 26.1 9.7 88 53-144 299-408 (638)
339 3h6r_A Clitocypin analog; cyst 23.4 2.8E+02 0.0095 22.0 9.7 59 86-152 88-148 (152)
340 3aj1_A Cellulose synthase oper 20.8 24 0.00081 28.7 0.3 22 144-165 14-35 (167)
341 2g8s_A Glucose/sorbosone dehyd 20.7 4E+02 0.014 22.8 12.4 110 23-134 66-217 (353)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.84 E-value=7.1e-20 Score=163.01 Aligned_cols=127 Identities=15% Similarity=0.230 Sum_probs=111.1
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+|+++.++.+| ...|.+++|+|++.++++++.|+ +|++||+++++++.... +|..+|.+++|+|++
T Consensus 191 wd~~~~~~~~~~~~h-~~~v~~l~~spd~~~l~s~s~dg--------~i~iwd~~~~~~~~~~~-~h~~~v~~~~~sp~~ 260 (321)
T 3ow8_A 191 FDIATGKLLHTLEGH-AMPIRSLTFSPDSQLLVTASDDG--------YIKIYDVQHANLAGTLS-GHASWVLNVAFCPDD 260 (321)
T ss_dssp EETTTTEEEEEECCC-SSCCCEEEECTTSCEEEEECTTS--------CEEEEETTTCCEEEEEC-CCSSCEEEEEECTTS
T ss_pred EECCCCcEEEEEccc-CCceeEEEEcCCCCEEEEEcCCC--------eEEEEECCCcceeEEEc-CCCCceEEEEECCCC
Confidence 466788899998876 68999999999888777777764 99999999988776542 345899999999997
Q ss_pred --e-eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 86 --V-LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 --l-~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+ +++.|++|+|||.++++++.++.+ |...|++++|+|++.+|++++.|++|++|++|
T Consensus 261 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~-h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 261 THFVSSSSDKSVKVWDVGTRTCVHTFFD-HQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CEEEEEeCCCcEEEEeCCCCEEEEEEcC-CCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 4 456899999999999999999998 69999999999999999999999999999987
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.81 E-value=8.4e-19 Score=156.25 Aligned_cols=126 Identities=13% Similarity=0.219 Sum_probs=109.5
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCC-CCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHM-YGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~-~~~pI~sI~F~~d 84 (248)
.|..+|++..++.+| .+.|++++|+|++..+++++.|+ +|++||+++++++....|. +..+|++++|+|+
T Consensus 211 wd~~~~~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~d~--------~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 281 (340)
T 1got_B 211 WDVREGMCRQTFTGH-ESDINAICFFPNGNAFATGSDDA--------TCRLFDLRADQELMTYSHDNIICGITSVSFSKS 281 (340)
T ss_dssp EETTTCSEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred EECCCCeeEEEEcCC-cCCEEEEEEcCCCCEEEEEcCCC--------cEEEEECCCCcEEEEEccCCcccceEEEEECCC
Confidence 456778888888876 68999999999887777777774 9999999999888776543 3357999999999
Q ss_pred c---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 85 Y---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 85 ~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+ +++++|+.|+|||..+++.+.++.+ |..+|++++|+|||.+|++|+.|++|++|+
T Consensus 282 g~~l~~g~~d~~i~vwd~~~~~~~~~~~~-h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 282 GRLLLAGYDDFNCNVWDALKADRAGVLAG-HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEECCCCeEEEEEcccCcEeeEeec-CCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 8 4456899999999999999999998 699999999999999999999999999995
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.81 E-value=7.3e-19 Score=154.30 Aligned_cols=157 Identities=11% Similarity=0.209 Sum_probs=121.6
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM 89 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss 89 (248)
+..++.+| .+.|.+++|+|++.++++++.|+ +|+|||+.+++++.... .+..+|+++.|+|++ ++++
T Consensus 5 ~~~~~~~h-~~~V~~~~fsp~~~~l~s~~~dg--------~v~lWd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~s 74 (304)
T 2ynn_A 5 IKKTFSNR-SDRVKGIDFHPTEPWVLTTLYSG--------RVELWNYETQVEVRSIQ-VTETPVRAGKFIARKNWIIVGS 74 (304)
T ss_dssp CEEEEEEE-CSCEEEEEECSSSSEEEEEETTS--------EEEEEETTTTEEEEEEE-CCSSCEEEEEEEGGGTEEEEEE
T ss_pred eEEeecCC-CCceEEEEECCCCCEEEEEcCCC--------cEEEEECCCCceeEEee-ccCCcEEEEEEeCCCCEEEEEC
Confidence 45667776 78999999999988888888775 99999999998877653 234899999999997 4456
Q ss_pred CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccccccchhhhhhccc--c
Q psy2083 90 DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGFLDNLTEELEENI--I 167 (248)
Q Consensus 90 dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~--~ 167 (248)
+|++|++||.++|+.+.++++ |...|++++|+|++.+|++|+.|++|++|++..- |+ +...++.+. .
T Consensus 75 ~d~~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~-----~~-----~~~~~~~h~~~v 143 (304)
T 2ynn_A 75 DDFRIRVFNYNTGEKVVDFEA-HPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN-----WA-----LEQTFEGHEHFV 143 (304)
T ss_dssp TTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGT-----TE-----EEEEECCCCSCE
T ss_pred CCCEEEEEECCCCcEEEEEeC-CCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCC-----cc-----hhhhhcccCCcE
Confidence 899999999999999999998 6999999999999999999999999999997531 11 111122221 1
Q ss_pred ccc-c---CCceeecHhHHhhcCCccc
Q psy2083 168 ENV-Y---DDYKFVTRQELEDLGLGHL 190 (248)
Q Consensus 168 ~~~-y---d~y~fvt~~~l~~l~~~~l 190 (248)
..+ + +...|+|-.....+.++.+
T Consensus 144 ~~v~~~p~~~~~l~sgs~D~~v~iwd~ 170 (304)
T 2ynn_A 144 MCVAFNPKDPSTFASGCLDRTVKVWSL 170 (304)
T ss_dssp EEEEECTTCTTEEEEEETTSEEEEEET
T ss_pred EEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 111 2 4467777777777777664
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.81 E-value=8.7e-19 Score=158.44 Aligned_cols=129 Identities=12% Similarity=0.159 Sum_probs=105.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcE-EEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMM-FIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l-~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~ 83 (248)
.|..+|+++.++.+| .+.|++++|+|++..+ ++++.|+ +|+|||+++++++... .+.++..+++++|+|
T Consensus 154 wd~~~~~~~~~~~~h-~~~V~~~~~~~~~~~~l~s~s~D~--------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p 224 (344)
T 4gqb_B 154 WDLAQQVVLSSYRAH-AAQVTCVAASPHKDSVFLSCSEDN--------RILLWDTRCPKPASQIGCSAPGYLPTSLAWHP 224 (344)
T ss_dssp EETTTTEEEEEECCC-SSCEEEEEECSSCTTEEEEEETTS--------CEEEEETTSSSCEEECC----CCCEEEEEECS
T ss_pred EECCCCcEEEEEcCc-CCceEEEEecCCCCCceeeecccc--------ccccccccccceeeeeecceeeccceeeeecC
Confidence 467789999999876 7999999999987655 4555554 9999999999987764 345557899999998
Q ss_pred Cc---ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCC
Q psy2083 84 NY---VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 84 d~---l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~ 144 (248)
+. ++ ++.|++|+|||.++++++.++.+ |...|++++|+|+| .+|++|++|++|++|++..
T Consensus 225 ~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~ 289 (344)
T 4gqb_B 225 QQSEVFVFGDENGTVSLVDTKSTSCVLSSAV-HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL 289 (344)
T ss_dssp SCTTEEEEEETTSEEEEEESCC--CCEEEEC-CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC
T ss_pred CCCcceEEeccCCcEEEEECCCCcEEEEEcC-CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Confidence 64 44 46899999999999999999998 69999999999998 5899999999999999753
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.80 E-value=1.8e-18 Score=155.69 Aligned_cols=126 Identities=13% Similarity=0.261 Sum_probs=109.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec-CCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-HMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~~~pI~sI~F~~d 84 (248)
.|.++|+++.++.+| ...|++++|+|++..+++++.|+ +|++||+|+++++.... +.+..++.+++|+|+
T Consensus 225 wd~~~~~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~D~--------~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~ 295 (354)
T 2pbi_B 225 WDMRSGQCVQAFETH-ESDVNSVRYYPSGDAFASGSDDA--------TCRLYDLRADREVAIYSKESIIFGASSVDFSLS 295 (354)
T ss_dssp EETTTCCEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred EECCCCcEEEEecCC-CCCeEEEEEeCCCCEEEEEeCCC--------eEEEEECCCCcEEEEEcCCCcccceeEEEEeCC
Confidence 567788999998876 68999999999887777777775 99999999998776653 334468999999999
Q ss_pred c--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 85 Y--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 85 ~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+ ++ ++.|++|+|||..+|+.+..+.+ |..+|++++|+|||.+|++|+.|++|++|+
T Consensus 296 g~~l~~g~~d~~i~vwd~~~~~~~~~l~~-h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 296 GRLLFAGYNDYTINVWDVLKGSRVSILFG-HENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp SSEEEEEETTSCEEEEETTTCSEEEEECC-CSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCEEEEEECCCcEEEEECCCCceEEEEEC-CCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 8 44 46899999999999999999998 699999999999999999999999999994
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.80 E-value=2.5e-18 Score=152.92 Aligned_cols=128 Identities=13% Similarity=0.273 Sum_probs=109.5
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
++..+++....+..+ ...|.+++|+|++..+++++.|+ +|++||+++++++.... +|..+|++++|+|++
T Consensus 149 ~~~~~~~~~~~~~~~-~~~v~~~~~spdg~~lasg~~dg--------~i~iwd~~~~~~~~~~~-~h~~~v~~l~~spd~ 218 (321)
T 3ow8_A 149 FGVESGKKEYSLDTR-GKFILSIAYSPDGKYLASGAIDG--------IINIFDIATGKLLHTLE-GHAMPIRSLTFSPDS 218 (321)
T ss_dssp EETTTCSEEEEEECS-SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTEEEEEEC-CCSSCCCEEEECTTS
T ss_pred EEcCCCceeEEecCC-CceEEEEEECCCCCEEEEEcCCC--------eEEEEECCCCcEEEEEc-ccCCceeEEEEcCCC
Confidence 355667777777765 57899999999888787777774 99999999998887653 344899999999997
Q ss_pred --ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 --VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.|++|+|||.++++...++.+ |...|++++|+|++.+|++|+.|++|++|++..
T Consensus 219 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 219 QLLVTASDDGYIKIYDVQHANLAGTLSG-HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp CEEEEECTTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CEEEEEcCCCeEEEEECCCcceeEEEcC-CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 44 45799999999999999999998 699999999999999999999999999999864
No 7
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.80 E-value=3.4e-18 Score=148.54 Aligned_cols=128 Identities=14% Similarity=0.203 Sum_probs=109.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..++++...+.+| .+.|++++|+|++.++++++.|+ +|++||+++.+++....+. .+|+++.|+|+.
T Consensus 200 ~d~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~Dg--------~i~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~ 268 (340)
T 4aow_A 200 WNLANCKLKTNHIGH-TGYLNTVTVSPDGSLCASGGKDG--------QAMLWDLNEGKHLYTLDGG--DIINALCFSPNR 268 (340)
T ss_dssp EETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTC--------EEEEEETTTTEEEEEEECS--SCEEEEEECSSS
T ss_pred EECCCCceeeEecCC-CCcEEEEEECCCCCEEEEEeCCC--------eEEEEEeccCceeeeecCC--ceEEeeecCCCC
Confidence 466778888888776 78999999999888787877775 9999999999998887665 689999999997
Q ss_pred --eeeeCCCeEEEEECCCCCEEEEeec--------CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 --VLSMDSSVVKIWSKDNGSLFTCIES--------GDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l~Ssdd~~IKIWD~~tGk~~~tie~--------~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.|+.|+|||.+++..+..+.. .|...|++++|+|||.+|++|+.|+.|++|++..
T Consensus 269 ~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 269 YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 6667899999999999888777653 2578999999999999999999999999999753
No 8
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.79 E-value=1.2e-18 Score=157.14 Aligned_cols=133 Identities=16% Similarity=0.213 Sum_probs=103.1
Q ss_pred cchhcCceeEEEe-cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIE-SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~-~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
.|.++++....+. ..+...|++++|+|+++.++++|+.+ |+|+|||+++++++.... .+..+|++|+|+|+
T Consensus 209 wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d-------~~i~~wd~~~~~~~~~~~-~~~~~v~~l~~sp~ 280 (357)
T 4g56_B 209 WDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDET-------GNVSLVNIKNPDSAQTSA-VHSQNITGLAYSYH 280 (357)
T ss_dssp CCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESS-------SCEEEEESSCGGGCEEEC-CCSSCEEEEEECSS
T ss_pred EECCCCceeeeeeeccccccccchhhhhcccceEEEeecc-------cceeEEECCCCcEeEEEe-ccceeEEEEEEcCC
Confidence 3556666666543 23356789999999887766554443 499999999998877653 34589999999998
Q ss_pred c---eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 85 Y---VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 85 ~---l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
+ |++ +.|++|+|||.++|+++..+ + |...|++++|+| |+.+|++|+.|++|++|++|.-|..
T Consensus 281 ~~~~lasgs~D~~i~iwd~~~~~~~~~~-~-H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~ 347 (357)
T 4g56_B 281 SSPFLASISEDCTVAVLDADFSEVFRDL-S-HRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRT 347 (357)
T ss_dssp SSCCEEEEETTSCEEEECTTSCEEEEEC-C-CSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-----
T ss_pred CCCEEEEEeCCCEEEEEECCCCcEeEEC-C-CCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc
Confidence 5 544 68999999999999988766 4 689999999999 8899999999999999999986655
No 9
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.79 E-value=4.1e-18 Score=149.51 Aligned_cols=128 Identities=13% Similarity=0.160 Sum_probs=108.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+|..+.++..+ ...|..++|+|++..+++++.|+ +|++||+++++++.... +|..+|++|+|+|++
T Consensus 40 Wd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~s~d~--------~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~ 109 (304)
T 2ynn_A 40 WNYETQVEVRSIQVT-ETPVRAGKFIARKNWIIVGSDDF--------RIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTK 109 (304)
T ss_dssp EETTTTEEEEEEECC-SSCEEEEEEEGGGTEEEEEETTS--------EEEEEETTTCCEEEEEE-CCSSCEEEEEECSSS
T ss_pred EECCCCceeEEeecc-CCcEEEEEEeCCCCEEEEECCCC--------EEEEEECCCCcEEEEEe-CCCCcEEEEEEcCCC
Confidence 456678888888876 68899999999888888887775 99999999998877652 344899999999997
Q ss_pred --e-eeeCCCeEEEEECCCCC-EEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 --V-LSMDSSVVKIWSKDNGS-LFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l-~Ssdd~~IKIWD~~tGk-~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ +++.|++|+|||.+++. +...+.+ |...|++++|+| ++.+|++|+.|++|++|++..
T Consensus 110 ~~l~sgs~D~~v~lWd~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 110 PYVLSGSDDLTVKLWNWENNWALEQTFEG-HEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (304)
T ss_dssp SEEEEEETTSCEEEEEGGGTTEEEEEECC-CCSCEEEEEECTTCTTEEEEEETTSEEEEEETTC
T ss_pred CEEEEECCCCeEEEEECCCCcchhhhhcc-cCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCC
Confidence 4 45689999999999884 4566777 699999999999 678999999999999999865
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.79 E-value=2.8e-18 Score=155.12 Aligned_cols=129 Identities=9% Similarity=0.135 Sum_probs=100.2
Q ss_pred cchhcCceeEEEec-CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~-~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
.|.+++++...+.. .+...+++++|+|+++.++++|+.+ |+|+|||+++++++.... +|..+|++|+|+|+
T Consensus 197 wd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d-------g~v~~wd~~~~~~~~~~~-~h~~~v~~v~fsp~ 268 (344)
T 4gqb_B 197 WDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN-------GTVSLVDTKSTSCVLSSA-VHSQCVTGLVFSPH 268 (344)
T ss_dssp EETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT-------SEEEEEESCC--CCEEEE-CCSSCEEEEEECSS
T ss_pred ccccccceeeeeecceeeccceeeeecCCCCcceEEeccC-------CcEEEEECCCCcEEEEEc-CCCCCEEEEEEccC
Confidence 35677888777642 2245688999999887766554443 499999999999887753 34489999999998
Q ss_pred c---eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC-EEEEEeCCCeEEEEEcCC
Q psy2083 85 Y---VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPS 144 (248)
Q Consensus 85 ~---l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg-ll~sa~ed~~I~~w~Ip~ 144 (248)
+ |++ +.|++|+|||.++++++ .+.+ |...|++++|+|++. +|++|+.|++|++|.+|.
T Consensus 269 g~~~lasgs~D~~i~vwd~~~~~~~-~~~~-H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 269 SVPFLASLSEDCSLAVLDSSLSELF-RSQA-HRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp SSCCEEEEETTSCEEEECTTCCEEE-EECC-CSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred CCeEEEEEeCCCeEEEEECCCCcEE-EEcC-CCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 6 544 68999999999999866 4566 699999999999985 677999999999999976
No 11
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.79 E-value=2.1e-18 Score=153.63 Aligned_cols=129 Identities=9% Similarity=0.090 Sum_probs=108.1
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+|+++.++.+| .+.|.+++|+|++..+++++.|+ +|++||+++++++.... +|..+|++|+|+|++
T Consensus 169 wd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~sg~~d~--------~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~p~~ 238 (340)
T 1got_B 169 WDIETGQQTTTFTGH-TGDVMSLSLAPDTRLFVSGACDA--------SAKLWDVREGMCRQTFT-GHESDINAICFFPNG 238 (340)
T ss_dssp EETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCSEEEEEC-CCSSCEEEEEECTTS
T ss_pred EECCCCcEEEEEcCC-CCceEEEEECCCCCEEEEEeCCC--------cEEEEECCCCeeEEEEc-CCcCCEEEEEEcCCC
Confidence 456788888888876 78999999999877777777774 99999999998877653 344899999999997
Q ss_pred ---eeeeCCCeEEEEECCCCCEEEEeec-CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 ---VLSMDSSVVKIWSKDNGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 ---l~Ssdd~~IKIWD~~tGk~~~tie~-~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.|++|+|||.++++.+.++.. ++...|++++|+|+|.+|++|+.|++|++|++..
T Consensus 239 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~ 301 (340)
T 1got_B 239 NAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK 301 (340)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEccc
Confidence 4456899999999999998888764 1235799999999999999999999999999765
No 12
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.79 E-value=2.5e-18 Score=155.77 Aligned_cols=135 Identities=9% Similarity=0.064 Sum_probs=105.2
Q ss_pred cchhcCceeEE-EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeE--E-ecCCCCCCeeEEEE
Q psy2083 6 LRQDKGSLFTC-IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLR--V-KDHMYGLPIRDIKF 81 (248)
Q Consensus 6 ~~~~~G~~~~~-~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~--~-~~h~~~~pI~sI~F 81 (248)
++..+|+.+.. ....|...|..++|+|++..+++++.++. ...++++||++...... . ..+++..+|++++|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 277 (365)
T 4h5i_A 202 ISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKG----KGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDV 277 (365)
T ss_dssp EETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSS----CCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEE
T ss_pred EEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCc----ceeEEeecccccceecceeeeeecCCCCCeEeEEE
Confidence 44556665543 33444678999999999888888876641 11268999998875422 1 23345589999999
Q ss_pred cCCc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 82 HDNY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 82 ~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+|++ |+ ++.|++|+|||.++|+++.++..+|..+|++|+|+|||.+|++|+.|++|++|+||.
T Consensus 278 Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 278 DMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp CTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 9998 44 468999999999999999987433799999999999999999999999999999985
No 13
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.78 E-value=6e-18 Score=155.13 Aligned_cols=128 Identities=7% Similarity=0.191 Sum_probs=111.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+|+...++.+| .+.|.+++|+|++..+++++.|+ +|+|||+++++++... ++|..+|.+++|+|++
T Consensus 135 wd~~~~~~~~~l~~h-~~~V~~v~~~~~~~~l~sgs~D~--------~i~iwd~~~~~~~~~~-~~h~~~V~~v~~~p~~ 204 (410)
T 1vyh_C 135 WDYETGDFERTLKGH-TDSVQDISFDHSGKLLASCSADM--------TIKLWDFQGFECIRTM-HGHDHNVSSVSIMPNG 204 (410)
T ss_dssp EETTTCCCCEEECCC-SSCEEEEEECTTSSEEEEEETTS--------CCCEEETTSSCEEECC-CCCSSCEEEEEECSSS
T ss_pred EECCCCcEEEEEecc-CCcEEEEEEcCCCCEEEEEeCCC--------eEEEEeCCCCceeEEE-cCCCCCEEEEEEeCCC
Confidence 456778888888876 78999999999877777877775 9999999998877664 3445899999999987
Q ss_pred --ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 --VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.|++|++||.++|+++.++.+ |...|++++++|+|.+|++|+.|++|++|++..
T Consensus 205 ~~l~s~s~D~~i~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~ 265 (410)
T 1vyh_C 205 DHIVSASRDKTIKMWEVQTGYCVKTFTG-HREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265 (410)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEeC-CCccEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 44 56899999999999999999998 689999999999999999999999999999864
No 14
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.77 E-value=1.1e-17 Score=148.69 Aligned_cols=132 Identities=6% Similarity=0.098 Sum_probs=109.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeC--CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIP--ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~--~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~ 83 (248)
.+..+++.+..+..+|.+.|.+++++| ++..+++++.|+ +|++||+++++++......+..+|++++|+|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg--------~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p 180 (343)
T 3lrv_A 109 LDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRG--------TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK 180 (343)
T ss_dssp EETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTC--------CEEEEESSSSCEEEEECCCSSCCCCEEEECT
T ss_pred eecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCC--------cEEEEECCCCcEEEEEecCCCCceEEEEECC
Confidence 355677778887766678899999999 877777777774 9999999999987766444456899999999
Q ss_pred Cc--eee-eCCCeEEEEECCCCCEE-EEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Q psy2083 84 NY--VLS-MDSSVVKIWSKDNGSLF-TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLG 146 (248)
Q Consensus 84 d~--l~S-sdd~~IKIWD~~tGk~~-~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG 146 (248)
++ +++ +.|+.|+|||.++++.+ .+++..|..+|++++|+|+|.+|++++++ +|++|++....
T Consensus 181 dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~ 246 (343)
T 3lrv_A 181 DSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDV 246 (343)
T ss_dssp TSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSST
T ss_pred CCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCC
Confidence 98 554 68999999999999988 78886458999999999999999999966 99999987643
No 15
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.77 E-value=1.1e-17 Score=151.32 Aligned_cols=125 Identities=10% Similarity=0.176 Sum_probs=103.7
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCC------CCCeeEEEEcC
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMY------GLPIRDIKFHD 83 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~------~~pI~sI~F~~ 83 (248)
.++.+.++.+| .+.|++++|+|++..+++++.|+ +|+|||+++++++....... ...|++++|+|
T Consensus 238 ~~~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~D~--------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 308 (380)
T 3iz6_a 238 TSRAVRTYHGH-EGDINSVKFFPDGQRFGTGSDDG--------TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSI 308 (380)
T ss_dssp TCCCCEEECCC-SSCCCEEEECTTSSEEEEECSSS--------CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECS
T ss_pred CCcceEEECCc-CCCeEEEEEecCCCeEEEEcCCC--------eEEEEECCCCcEEEEecccccccccccCceEEEEECC
Confidence 45677777776 78999999999887777777764 99999999998877653211 12489999999
Q ss_pred Cc--ee-eeCCCeEEEEECCCCCEEEEe----ecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 84 NY--VL-SMDSSVVKIWSKDNGSLFTCI----ESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 84 d~--l~-Ssdd~~IKIWD~~tGk~~~ti----e~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++ ++.|+.|+|||..+++.+..+ .+ |...|++++|+|||.+|++|+.|++|++|++..
T Consensus 309 ~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~-h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 309 SGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNS-HEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp SSSEEEEECTTSCEEEEETTTCCEEEEECCSCSS-CCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred CCCEEEEEECCCCEEEEECCCCceEEEEecccCC-CCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 98 44 458999999999999998887 44 689999999999999999999999999999763
No 16
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.77 E-value=2.2e-17 Score=146.98 Aligned_cols=122 Identities=11% Similarity=0.224 Sum_probs=101.0
Q ss_pred CceeEEEecCCCCCeeEEEE-----eC-CCCcEEEeecCceeeeecCCeeEEEEcCCC-------ceeEEecCCCCCCee
Q psy2083 11 GSLFTCIESGDQTQFNNLCH-----IP-ESGMMFIANENKKILTYYIPAFYLYDIRAD-------KPLRVKDHMYGLPIR 77 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~-----~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-------~pl~~~~h~~~~pI~ 77 (248)
..+..++.+| .+.|++++| ++ ++..+++++.|+ +|+|||+..+ .|.... .+|..+|+
T Consensus 11 ~~~~~~l~gH-~~~V~~~~~~~s~~~~~d~~~l~sgs~D~--------~v~iWd~~~~~~~~~~~~~~~~l-~~h~~~V~ 80 (343)
T 2xzm_R 11 VVKRGILEGH-SDWVTSIVAGFSQKENEDSPVLISGSRDK--------TVMIWKLYEEEQNGYFGIPHKAL-TGHNHFVS 80 (343)
T ss_dssp EEEEEEEECC-SSCEEEEEECCCSSTTCCCCEEEEEETTS--------CEEEEEECSSCCSSBSEEEEEEE-CCCSSCEE
T ss_pred eeeeeeeccc-hhhhhheeeEEEeecCCCCCEEEEEcCCC--------EEEEEECCcCCcccccccccchh-ccCCCceE
Confidence 4466677776 789999999 66 555677777764 9999999864 333333 34458999
Q ss_pred EEEEcCCc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 78 DIKFHDNY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 78 sI~F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+|+|+|++ ++ ++.|++|+|||.++|+.+.++.+ |..+|++++|+|++.+|++|+.|++|++|++.
T Consensus 81 ~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~-h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 81 DLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVG-HQSEVYSVAFSPDNRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp EEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEEC-CCSCEEEEEECSSTTEEEEEETTSCEEEEESS
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcC-CCCcEEEEEECCCCCEEEEEcCCCEEEEEecc
Confidence 99999987 44 56899999999999999999998 69999999999999999999999999999974
No 17
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.76 E-value=1.9e-17 Score=148.04 Aligned_cols=125 Identities=10% Similarity=0.205 Sum_probs=103.7
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeE--EecCCCCCCeeEEEEcCCc--e
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLR--VKDHMYGLPIRDIKFHDNY--V 86 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~--~~~h~~~~pI~sI~F~~d~--l 86 (248)
..++.++.+|..+.|..++|+|++.++++++.|+ +|+|||+.++.... ....+|..+|++|+|+|++ +
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~--------~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l 76 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDR--------RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYL 76 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTS--------CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEE
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCC--------eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEE
Confidence 4577788877444899999999988888888875 99999999886432 2334566899999999997 4
Q ss_pred e-eeCCCeEEEEECCCCC--EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 87 L-SMDSSVVKIWSKDNGS--LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 87 ~-Ssdd~~IKIWD~~tGk--~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ ++.|++|+|||..+++ ++.++++ |..+|++++|+|++.+|++|+.|++|++|++..
T Consensus 77 ~s~s~D~~v~iw~~~~~~~~~~~~~~~-h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 77 ASASFDATTCIWKKNQDDFECVTTLEG-HENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp EEEETTSCEEEEEECCC-EEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEEECT
T ss_pred EEEECCCcEEEEEccCCCeEEEEEccC-CCCCceEEEEeCCCCEEEEEECCCeEEEEECCC
Confidence 4 4689999999998774 5778888 699999999999999999999999999999864
No 18
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.76 E-value=4.6e-17 Score=141.76 Aligned_cols=127 Identities=11% Similarity=0.203 Sum_probs=109.4
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~- 85 (248)
+..+|+....+.+| ...|..++|+|++..+++++.|+ +|++||+++++++.... .|..+|.++.|+|++
T Consensus 51 ~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~d~--------~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~ 120 (312)
T 4ery_A 51 GAYDGKFEKTISGH-KLGISDVAWSSDSNLLVSASDDK--------TLKIWDVSSGKCLKTLK-GHSNYVFCCNFNPQSN 120 (312)
T ss_dssp ETTTCCEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSS
T ss_pred eCCCcccchhhccC-CCceEEEEEcCCCCEEEEECCCC--------EEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCC
Confidence 45567888888776 68999999999887787877775 99999999998876642 334899999999987
Q ss_pred -ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.|+.|++||.++++.+..+.. |..+|++++|+|++.+|++|+.|+.|++|++..
T Consensus 121 ~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~ 180 (312)
T 4ery_A 121 LIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 180 (312)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEEEeCCCcEEEEECCCCEEEEEecC-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 44 56899999999999999999998 689999999999999999999999999999865
No 19
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.76 E-value=1.9e-17 Score=146.43 Aligned_cols=122 Identities=13% Similarity=0.215 Sum_probs=101.1
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCC-cEEEeecCceeeeecCCeeEEEEcCCC-----ceeEEecCCCCCCeeEEEEcCC
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPAFYLYDIRAD-----KPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g-~l~~ag~d~~~~~~~~G~V~LwDlRs~-----~pl~~~~h~~~~pI~sI~F~~d 84 (248)
..+..++.+| .+.|++++|+|+++ ++++++.|+ +|++||+... .|+... .+|..+|++++|+|+
T Consensus 7 ~~l~~~l~gH-~~~V~~l~~~~~~~~~l~s~s~D~--------~v~~W~~~~~~~~~~~~~~~~-~~h~~~v~~~~~s~d 76 (319)
T 3frx_A 7 LVLRGTLEGH-NGWVTSLATSAGQPNLLLSASRDK--------TLISWKLTGDDQKFGVPVRSF-KGHSHIVQDCTLTAD 76 (319)
T ss_dssp EEEEEEECCC-SSCEEEEEECSSCTTEEEEEETTS--------EEEEEEEEEETTEEEEEEEEE-ECCSSCEEEEEECTT
T ss_pred EEEEEEEccc-cceEEEEEccCCCccEEEEecCCc--------cEEEecCCCCCccccccceEE-eCCcccEEEEEECCC
Confidence 4456677776 79999999999764 466666664 9999999753 344443 234589999999999
Q ss_pred c--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 85 Y--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 85 ~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+ ++ ++.|++|||||.++|+++..+.+ |..+|++++|+|++.+|++|+.|++|++|++.
T Consensus 77 g~~l~s~s~D~~v~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~ 137 (319)
T 3frx_A 77 GAYALSASWDKTLRLWDVATGETYQRFVG-HKSDVMSVDIDKKASMIISGSRDKTIKVWTIK 137 (319)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred CCEEEEEeCCCEEEEEECCCCCeeEEEcc-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 7 44 56899999999999999999998 69999999999999999999999999999975
No 20
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.76 E-value=2.5e-17 Score=158.57 Aligned_cols=129 Identities=11% Similarity=0.157 Sum_probs=107.1
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC------CCCCCeeEEE
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH------MYGLPIRDIK 80 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h------~~~~pI~sI~ 80 (248)
|..++++..++.+| .+.|++++|+|++.++++++.|+ +|+|||+++++++..... +|..+|.+|+
T Consensus 176 d~~~~~~~~~l~~H-~~~V~~v~fspdg~~las~s~D~--------~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~ 246 (611)
T 1nr0_A 176 EGPPFKFKSTFGEH-TKFVHSVRYNPDGSLFASTGGDG--------TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLT 246 (611)
T ss_dssp ETTTBEEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEE
T ss_pred ECCCCeEeeeeccc-cCceEEEEECCCCCEEEEEECCC--------cEEEEECCCCcEeeeeccccccccccCCCEEEEE
Confidence 34566777888776 78999999999888788887775 999999999988776522 4558999999
Q ss_pred EcCCc--ee-eeCCCeEEEEECCCCCEEEEee------------------------------------------cCCCCC
Q psy2083 81 FHDNY--VL-SMDSSVVKIWSKDNGSLFTCIE------------------------------------------SGDQTQ 115 (248)
Q Consensus 81 F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie------------------------------------------~~h~~~ 115 (248)
|+|++ ++ ++.|++|||||.++++++.++. .+|...
T Consensus 247 ~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~ 326 (611)
T 1nr0_A 247 WSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKA 326 (611)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSC
T ss_pred ECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCC
Confidence 99997 44 4689999999999987765542 126889
Q ss_pred eeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 116 FNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 116 In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|++++|+|||.+|++|+.|++|++|++..
T Consensus 327 v~~l~~spdg~~l~s~s~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 327 ITALSSSADGKTLFSADAEGHINSWDIST 355 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEECCC
Confidence 99999999999999999999999999864
No 21
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.76 E-value=2.2e-17 Score=151.29 Aligned_cols=126 Identities=10% Similarity=0.174 Sum_probs=104.7
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCC--------------------CcEEEeecCceeeeecCCeeEEEEcCCCcee
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPES--------------------GMMFIANENKKILTYYIPAFYLYDIRADKPL 65 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~--------------------g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl 65 (248)
.|..++++...+.+| ...|.+++|+|++ .++++++.| |+|++||+++++++
T Consensus 261 wd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D--------~~i~iwd~~~~~~~ 331 (410)
T 1vyh_C 261 WVVATKECKAELREH-RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD--------KTIKMWDVSTGMCL 331 (410)
T ss_dssp EETTTCCEEEEECCC-SSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETT--------SEEEEEETTTTEEE
T ss_pred EECCCCceeeEecCC-CceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCC--------CeEEEEECCCCceE
Confidence 355677788888776 6889999999863 235555555 49999999999887
Q ss_pred EEecCCCCCCeeEEEEcCCc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 66 RVKDHMYGLPIRDIKFHDNY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 66 ~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
.... +|..+|++|.|+|++ ++ +++|++|+|||..+++++.++.+ |...|++++|+|++.+|++|+.|++|++|++
T Consensus 332 ~~~~-~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 332 MTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEEE-CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEEC-CSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EEEE-CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcC-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 7652 344899999999997 44 56899999999999999999998 6999999999999999999999999999974
No 22
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.75 E-value=5.5e-17 Score=143.48 Aligned_cols=127 Identities=11% Similarity=0.215 Sum_probs=107.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC-
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN- 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d- 84 (248)
.|..+|+++..+.+| .+.|.+++|+|++.++++++.|+ +|++||++.........| ..+|.++.|+|.
T Consensus 92 wd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s~D~--------~i~vwd~~~~~~~~~~~h--~~~v~~~~~~~~~ 160 (319)
T 3frx_A 92 WDVATGETYQRFVGH-KSDVMSVDIDKKASMIISGSRDK--------TIKVWTIKGQCLATLLGH--NDWVSQVRVVPNE 160 (319)
T ss_dssp EETTTTEEEEEEECC-SSCEEEEEECTTSCEEEEEETTS--------CEEEEETTSCEEEEECCC--SSCEEEEEECCC-
T ss_pred EECCCCCeeEEEccC-CCcEEEEEEcCCCCEEEEEeCCC--------eEEEEECCCCeEEEEecc--CCcEEEEEEccCC
Confidence 466788899988876 78999999999888788887775 999999986433333344 489999999984
Q ss_pred -----c---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 85 -----Y---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 85 -----~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
. +.++.|++|++||.++++....+.+ |..+|++++|+|+|.+|++|+.|++|++|++..
T Consensus 161 ~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~-h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~ 227 (319)
T 3frx_A 161 KADDDSVTIISAGNDKMVKAWNLNQFQIEADFIG-HNSNINTLTASPDGTLIASAGKDGEIMLWNLAA 227 (319)
T ss_dssp -----CCEEEEEETTSCEEEEETTTTEEEEEECC-CCSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred CCCCCccEEEEEeCCCEEEEEECCcchhheeecC-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 2 4456899999999999999999988 699999999999999999999999999999865
No 23
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.75 E-value=6.1e-17 Score=147.14 Aligned_cols=129 Identities=7% Similarity=0.207 Sum_probs=107.7
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcC-C
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHD-N 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~-d 84 (248)
.|..+++++..+.+| ...|.+++|+|++..+++++.|+ +|++||++++++.....+. ..|.+++|+| +
T Consensus 150 wd~~~~~~~~~~~~h-~~~v~~~~~~p~~~~l~s~s~d~--------~v~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~ 218 (393)
T 1erj_A 150 WDIENRKIVMILQGH-EQDIYSLDYFPSGDKLVSGSGDR--------TVRIWDLRTGQCSLTLSIE--DGVTTVAVSPGD 218 (393)
T ss_dssp EETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTTEEEEEEECS--SCEEEEEECSTT
T ss_pred EECCCCcEEEEEccC-CCCEEEEEEcCCCCEEEEecCCC--------cEEEEECCCCeeEEEEEcC--CCcEEEEEECCC
Confidence 356678888888776 78999999999888888887775 9999999999887776655 6899999999 5
Q ss_pred c--e-eeeCCCeEEEEECCCCCEEEEee------cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 85 Y--V-LSMDSSVVKIWSKDNGSLFTCIE------SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 85 ~--l-~Ssdd~~IKIWD~~tGk~~~tie------~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
+ + +++.|++|+|||.++|+.+..+. .+|...|++++|+|+|.+|++|+.|++|++|++...
T Consensus 219 ~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 219 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 5 4 45689999999999999888873 126889999999999999999999999999998653
No 24
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.74 E-value=1.4e-16 Score=138.76 Aligned_cols=129 Identities=12% Similarity=0.245 Sum_probs=109.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+++++..+.+| .+.|..++|+|++..+++++.|+ +|++||+++++++.... .|..+|.++.|+|++
T Consensus 92 wd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d~--------~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~ 161 (312)
T 4ery_A 92 WDVSSGKCLKTLKGH-SNYVFCCNFNPQSNLIVSGSFDE--------SVRIWDVKTGKCLKTLP-AHSDPVSAVHFNRDG 161 (312)
T ss_dssp EETTTCCEEEEEECC-SSCEEEEEECSSSSEEEEEETTS--------CEEEEETTTCCEEEEEC-CCSSCEEEEEECTTS
T ss_pred EECCCCcEEEEEcCC-CCCEEEEEEcCCCCEEEEEeCCC--------cEEEEECCCCEEEEEec-CCCCcEEEEEEcCCC
Confidence 466778888888876 68899999999887787777775 99999999998877653 234899999999987
Q ss_pred ---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 ---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 ---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.|+.|++||.++++.+..+..++..+++.++|+|++.+|++++.|+.|++|++..
T Consensus 162 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 223 (312)
T 4ery_A 162 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 223 (312)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred CEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 44568999999999999999888654467899999999999999999999999999865
No 25
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.74 E-value=2.1e-17 Score=149.03 Aligned_cols=164 Identities=13% Similarity=0.128 Sum_probs=124.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~ 83 (248)
.|..+|+++..+.+| .+.|++++|+|++.. +++++.|+ +|+|||+++++++... .+.+..+|++|+|+|
T Consensus 166 wd~~~~~~~~~~~~h-~~~v~~v~~s~~~~~~~~s~~~dg--------~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp 236 (357)
T 4g56_B 166 WDLSQKAVLKSYNAH-SSEVNCVAACPGKDTIFLSCGEDG--------RILLWDTRKPKPATRIDFCASDTIPTSVTWHP 236 (357)
T ss_dssp EETTTTEEEEEECCC-SSCEEEEEECTTCSSCEEEEETTS--------CEEECCTTSSSCBCBCCCTTCCSCEEEEEECT
T ss_pred EECCCCcEEEEEcCC-CCCEEEEEEccCCCceeeeeccCC--------ceEEEECCCCceeeeeeeccccccccchhhhh
Confidence 467788999998876 789999999998754 55666664 9999999999887653 345567899999999
Q ss_pred Cc---eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCCCCCccccccch
Q psy2083 84 NY---VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGPAPKWCGFLDNL 158 (248)
Q Consensus 84 d~---l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~ 158 (248)
+. +++ +.|+.|+|||.++++++.++.+ |..+|++++|+|++ .+|++|++|++|++|++.. |. +
T Consensus 237 ~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~-~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~-~~----------~ 304 (357)
T 4g56_B 237 EKDDTFACGDETGNVSLVNIKNPDSAQTSAV-HSQNITGLAYSYHSSPFLASISEDCTVAVLDADF-SE----------V 304 (357)
T ss_dssp TSTTEEEEEESSSCEEEEESSCGGGCEEECC-CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS-CE----------E
T ss_pred cccceEEEeecccceeEEECCCCcEeEEEec-cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC-Cc----------E
Confidence 75 444 5799999999999999999998 68999999999988 5789999999999999754 11 1
Q ss_pred hhhhhcc-ccccc----cCCceeecHhHHhhcCCccc
Q psy2083 159 TEELEEN-IIENV----YDDYKFVTRQELEDLGLGHL 190 (248)
Q Consensus 159 tee~e~~-~~~~~----yd~y~fvt~~~l~~l~~~~l 190 (248)
...+++. ....+ .|+..|+|-.+...+.+|++
T Consensus 305 ~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 305 FRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred eEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEEC
Confidence 1122222 12222 35667888777777776664
No 26
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.73 E-value=1.3e-16 Score=141.70 Aligned_cols=123 Identities=13% Similarity=0.224 Sum_probs=95.8
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc--eeEEecCC-CCCCeeEEEEcCCc-
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK--PLRVKDHM-YGLPIRDIKFHDNY- 85 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~--pl~~~~h~-~~~pI~sI~F~~d~- 85 (248)
+.+++.++.+| .+.|.++.|+|+ ++++++.|+ +|+|||++.+. .+...... |..+|++|+|+|++
T Consensus 3 ~~~~~~~~~~h-~~~v~~~~~s~~--~las~~~D~--------~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 71 (330)
T 2hes_X 3 SINLIKSLKLY-KEKIWSFDFSQG--ILATGSTDR--------KIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTS 71 (330)
T ss_dssp CCEEEEEEECC-SSCEEEEEEETT--EEEEEESSS--------CEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSS
T ss_pred ccccceeeccC-CCceeeeccCCC--EEEEEcCCC--------EEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCC
Confidence 45678888876 799999999986 677777664 99999999863 34444222 66899999999997
Q ss_pred -ee-eeCCCeEEEEECCC-------CCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VL-SMDSSVVKIWSKDN-------GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~-Ssdd~~IKIWD~~t-------Gk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.|++|+|||.++ ++++..+.+ |..+|++++|+|+|.+|++|+.|++|++|++..
T Consensus 72 ~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~ 138 (330)
T 2hes_X 72 LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG-HENEVKGVAWSNDGYYLATCSRDKSVWIWETDE 138 (330)
T ss_dssp EEEEEETTSCEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETTSCEEEEECCT
T ss_pred EEEEEeCCCcEEEEEcccCcCccccceeEEEEcC-CCCcEEEEEECCCCCEEEEEeCCCEEEEEeccC
Confidence 44 46899999999853 456777887 699999999999999999999999999999854
No 27
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.73 E-value=1.4e-16 Score=143.32 Aligned_cols=120 Identities=9% Similarity=0.156 Sum_probs=101.9
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC--c--ee-e
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN--Y--VL-S 88 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d--~--l~-S 88 (248)
...+..| .+.|..++|+|++..+++++.|+ +|+|||+++++++.... +|..+|.++.|+|+ + ++ +
T Consensus 147 ~~~~~~h-~~~v~~~~~~~~~~~l~t~s~D~--------~v~lwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~g~~l~sg 216 (354)
T 2pbi_B 147 KKSVAMH-TNYLSACSFTNSDMQILTASGDG--------TCALWDVESGQLLQSFH-GHGADVLCLDLAPSETGNTFVSG 216 (354)
T ss_dssp CEEEEEC-SSCEEEEEECSSSSEEEEEETTS--------EEEEEETTTCCEEEEEE-CCSSCEEEEEECCCSSCCEEEEE
T ss_pred ceeeecc-CCcEEEEEEeCCCCEEEEEeCCC--------cEEEEeCCCCeEEEEEc-CCCCCeEEEEEEeCCCCCEEEEE
Confidence 3444444 68899999999887788888775 99999999999887652 34489999999874 3 44 5
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+.|++|++||.++|+++.++++ |...|++++|+|++.+|++|+.|++|++|++..
T Consensus 217 s~Dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~ 271 (354)
T 2pbi_B 217 GCDKKAMVWDMRSGQCVQAFET-HESDVNSVRYYPSGDAFASGSDDATCRLYDLRA 271 (354)
T ss_dssp ETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred eCCCeEEEEECCCCcEEEEecC-CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 6899999999999999999998 699999999999999999999999999999865
No 28
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.73 E-value=9.5e-17 Score=148.13 Aligned_cols=135 Identities=10% Similarity=0.102 Sum_probs=96.6
Q ss_pred chhcCceeEEEecCC--CCCeeEEEEeCCCCcEEEeecCc----eeeeecCCeeEEEEcCCCceeEEe----cCCCCCCe
Q psy2083 7 RQDKGSLFTCIESGD--QTQFNNLCHIPESGMMFIANENK----KILTYYIPAFYLYDIRADKPLRVK----DHMYGLPI 76 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~--~~~V~~~~~~~~~g~l~~ag~d~----~~~~~~~G~V~LwDlRs~~pl~~~----~h~~~~pI 76 (248)
|..+|+++.++.+|| ...|..++|+|++..+++++.+. -++|+.|++|++||..+++.+.+. ..+|...+
T Consensus 209 Dl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~ 288 (356)
T 2w18_A 209 NLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRF 288 (356)
T ss_dssp ETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCE
T ss_pred ECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCccee
Confidence 667899999998654 34677778999765555544322 146777889999999999877654 23433445
Q ss_pred eEEEEcCCceee-eCCCeEEEEECCCCCEEEEeecCCCCCe-eEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 77 RDIKFHDNYVLS-MDSSVVKIWSKDNGSLFTCIESGDQTQF-NNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 77 ~sI~F~~d~l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~I-n~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
.+..++...+++ +.|++|||||..+|+++.++++ |...+ .+++|+|||.+|++|+.|++|++|++
T Consensus 289 lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~g-H~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 289 LEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPP-VSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEEETTEEEEEETTSCEEEEETTTCSEEEEECC-C--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EccccCCCEEEEEcCCCcEEEEECCCCcEEEEecC-CCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 555555333444 5799999999999999999998 45554 46899999999999999999999985
No 29
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.73 E-value=3.7e-17 Score=144.40 Aligned_cols=121 Identities=10% Similarity=0.184 Sum_probs=92.6
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce--eEEecCCCCCCeeEEEEcCC--c--ee
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP--LRVKDHMYGLPIRDIKFHDN--Y--VL 87 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p--l~~~~h~~~~pI~sI~F~~d--~--l~ 87 (248)
++.+..+|.+.|++++|+|++.++++++.|+ +|+|||+++++. +... .+|..+|++|+|+++ + ++
T Consensus 5 ~~~~~~~H~~~V~~v~~s~~g~~lasgs~D~--------~v~lwd~~~~~~~~~~~l-~gH~~~V~~v~~~~~~~~~~l~ 75 (316)
T 3bg1_A 5 INTVDTSHEDMIHDAQMDYYGTRLATCSSDR--------SVKIFDVRNGGQILIADL-RGHEGPVWQVAWAHPMYGNILA 75 (316)
T ss_dssp ---------CCEEEEEECGGGCEEEEEETTT--------EEEEEEEETTEEEEEEEE-ECCSSCEEEEEECCGGGSSCEE
T ss_pred eeeecccccCeEEEeeEcCCCCEEEEEeCCC--------eEEEEEecCCCcEEEEEE-cCCCccEEEEEeCCCCCCCEEE
Confidence 4444444589999999999888888887775 999999998753 3332 244589999999753 3 44
Q ss_pred -eeCCCeEEEEECCCCC--EEEEeecCCCCCeeEEEEeCC--CCEEEEEeCCCeEEEEEcCC
Q psy2083 88 -SMDSSVVKIWSKDNGS--LFTCIESGDQTQFNNLCHIPE--SGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 88 -Ssdd~~IKIWD~~tGk--~~~tie~~h~~~In~l~~~pd--sgll~sa~ed~~I~~w~Ip~ 144 (248)
++.|++|+|||.++|+ ...++.+ |...|++++|+|+ +.+|++|+.|++|++|++..
T Consensus 76 s~s~D~~v~iWd~~~~~~~~~~~~~~-h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 76 SCSYDRKVIIWREENGTWEKSHEHAG-HDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTG 136 (316)
T ss_dssp EEETTSCEEEECCSSSCCCEEEEECC-CSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECS
T ss_pred EEECCCEEEEEECCCCcceEEEEccC-CCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCC
Confidence 4689999999999884 5667777 6899999999998 78999999999999999864
No 30
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.73 E-value=9.7e-17 Score=143.37 Aligned_cols=122 Identities=8% Similarity=0.243 Sum_probs=99.9
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeE--EecCCCCCCeeEEEEcCCc--ee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLR--VKDHMYGLPIRDIKFHDNY--VL 87 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~--~~~h~~~~pI~sI~F~~d~--l~ 87 (248)
+++.++.+| .+.|.+++|+|++..+++++.|+ +|++||++++.+.. .....|..+|++++|+|++ ++
T Consensus 96 ~~~~~~~~h-~~~v~~v~~sp~~~~l~s~s~D~--------~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 166 (345)
T 3fm0_A 96 ECVTTLEGH-ENEVKSVAWAPSGNLLATCSRDK--------SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLA 166 (345)
T ss_dssp EEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------CEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEE
T ss_pred EEEEEccCC-CCCceEEEEeCCCCEEEEEECCC--------eEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEE
Confidence 456677765 78999999999887788877775 99999999874322 2223455899999999997 44
Q ss_pred -eeCCCeEEEEECCCCC--EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 88 -SMDSSVVKIWSKDNGS--LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 88 -Ssdd~~IKIWD~~tGk--~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++.|++|+|||.++++ +..++.+ |...|++++|+|+|.+|++|+.|++|++|++.
T Consensus 167 s~s~d~~i~~w~~~~~~~~~~~~~~~-h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 167 SASYDDTVKLYREEEDDWVCCATLEG-HESTVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEeCCCcEEEEEecCCCEEEEEEecC-CCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 4689999999999876 4467787 69999999999999999999999999999863
No 31
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.73 E-value=1.8e-16 Score=144.78 Aligned_cols=126 Identities=11% Similarity=0.169 Sum_probs=103.4
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEe-ecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eee
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIA-NENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSM 89 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~a-g~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ss 89 (248)
+.....+ .+.|..++|.|.++.+++. ++. .||+|++||+++++++....+. ..|.++.|++++ + +++
T Consensus 269 ~~~~~~~-~~~V~~~~~~p~~~~~la~~~gs------~D~~I~iwd~~t~~~~~~~~~~--~~v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 269 LQTFTQH-QGAVKAVAWCPWQSNVLATGGGT------SDRHIRIWNVCSGACLSAVDAH--SQVCSILWSPHYKELISGH 339 (420)
T ss_dssp SEEECCC-SSCEEEEEECTTCTTEEEEEECT------TTCEEEEEETTTTEEEEEEECS--SCEEEEEEETTTTEEEEEE
T ss_pred eeeeccc-CCceeeeeeCCCcccEEEEEeec------CCCEEEEEeCCccccceeeccc--cceeeeeecCCCCeEEEEE
Confidence 3444444 6889999999987776543 322 3469999999999988877655 689999999987 3 333
Q ss_pred --CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCC
Q psy2083 90 --DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAP 149 (248)
Q Consensus 90 --dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP 149 (248)
.|+.|+|||..+++++.++.+ |...|++++|+|||.+|++|+.|++|++|++..+.|+.
T Consensus 340 g~~d~~I~iwd~~~~~~v~~l~g-H~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~ 400 (420)
T 4gga_A 340 GFAQNQLVIWKYPTMAKVAELKG-HTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPAR 400 (420)
T ss_dssp CTTTCCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC-
T ss_pred ecCCCEEEEEECCCCcEEEEEcC-CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccc
Confidence 689999999999999999998 79999999999999999999999999999998766653
No 32
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.73 E-value=1.2e-16 Score=144.49 Aligned_cols=171 Identities=13% Similarity=0.138 Sum_probs=119.5
Q ss_pred cchhcCceeEEEe----cCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEE
Q psy2083 6 LRQDKGSLFTCIE----SGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDI 79 (248)
Q Consensus 6 ~~~~~G~~~~~~~----~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI 79 (248)
.|..+|+.+..+. .+|...|.+++++|.++. +++++.| |+|++||+|.. +++... ++|..+|++|
T Consensus 185 wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D--------~~v~~wd~~~~~~~~~~~-~~h~~~v~~v 255 (380)
T 3iz6_a 185 WDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD--------TTVRLWDLRITSRAVRTY-HGHEGDINSV 255 (380)
T ss_dssp ECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT--------SCEEEEETTTTCCCCEEE-CCCSSCCCEE
T ss_pred EEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC--------CeEEEEECCCCCcceEEE-CCcCCCeEEE
Confidence 4566788777763 345788999999885554 5555555 49999999954 555554 3455899999
Q ss_pred EEcCCc--ee-eeCCCeEEEEECCCCCEEEEeecC------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCC
Q psy2083 80 KFHDNY--VL-SMDSSVVKIWSKDNGSLFTCIESG------DQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPK 150 (248)
Q Consensus 80 ~F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~------h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~ 150 (248)
+|+|++ ++ +++|++|+|||.++|+.+..+..+ +...|++++|+|+|.+|++|+.|+.|.+|++..-...
T Consensus 256 ~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~-- 333 (380)
T 3iz6_a 256 KFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMV-- 333 (380)
T ss_dssp EECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEE--
T ss_pred EEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceE--
Confidence 999997 44 468999999999999999888652 1124899999999999999999999999997531110
Q ss_pred ccccccchhhhhhcc--c---cccccCCceeecHhHHhhcCCccccC
Q psy2083 151 WCGFLDNLTEELEEN--I---IENVYDDYKFVTRQELEDLGLGHLIG 192 (248)
Q Consensus 151 wcs~ld~~tee~e~~--~---~~~~yd~y~fvt~~~l~~l~~~~lig 192 (248)
..+..+. ..+ . ...-.|+-.++|-.....+.+|.+-|
T Consensus 334 --~~~~~~~---~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 334 --LNLGTLQ---NSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp --EEECCSC---SSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred --EEEeccc---CCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 0111110 111 1 11224566677877777777777654
No 33
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.72 E-value=1.5e-16 Score=141.23 Aligned_cols=123 Identities=8% Similarity=0.165 Sum_probs=97.0
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC----ceeEEecCCCCCCeeEEEEcCCc-
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD----KPLRVKDHMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~----~pl~~~~h~~~~pI~sI~F~~d~- 85 (248)
++++..+.+| .+.|.+++|+|++.++++++.|+ +|++||++.. +++... .+|..+|++|+|+|++
T Consensus 97 ~~~~~~~~~h-~~~V~~v~~sp~g~~las~s~D~--------~v~iwd~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~ 166 (330)
T 2hes_X 97 MDLLAIIEGH-ENEVKGVAWSNDGYYLATCSRDK--------SVWIWETDESGEEYECISVL-QEHSQDVKHVIWHPSEA 166 (330)
T ss_dssp CEEEEEEC-----CEEEEEECTTSCEEEEEETTS--------CEEEEECCTTCCCCEEEEEE-CCCSSCEEEEEECSSSS
T ss_pred ceeEEEEcCC-CCcEEEEEECCCCCEEEEEeCCC--------EEEEEeccCCCCCeEEEEEe-ccCCCceEEEEECCCCC
Confidence 4566677765 78999999999887788877775 9999999643 233333 2445899999999997
Q ss_pred -ee-eeCCCeEEEEECCCC--CEEEEeecCCCCCeeEEEEeCC--CCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VL-SMDSSVVKIWSKDNG--SLFTCIESGDQTQFNNLCHIPE--SGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~-Ssdd~~IKIWD~~tG--k~~~tie~~h~~~In~l~~~pd--sgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.|++|||||..++ +++.++.+ |...|++++|+|+ +.+|++|+.|++|++|++..
T Consensus 167 ~l~s~s~D~~i~iW~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 167 LLASSSYDDTVRIWKDYDDDWECVAVLNG-HEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred EEEEEcCCCeEEEEECCCCCeeEEEEccC-CCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 44 468999999999876 67888888 6999999999998 66899999999999999754
No 34
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.72 E-value=3.1e-16 Score=139.51 Aligned_cols=129 Identities=13% Similarity=0.227 Sum_probs=105.6
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d 84 (248)
.|..+|+++..+.+| .+.|.+++|+|++..+++++.|+ +|+|||++........ ...|..+|.++.|+|+
T Consensus 103 wd~~~~~~~~~~~~h-~~~v~~v~~sp~~~~l~s~~~d~--------~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 173 (343)
T 2xzm_R 103 WDLRTGTTYKRFVGH-QSEVYSVAFSPDNRQILSAGAER--------EIKLWNILGECKFSSAEKENHSDWVSCVRYSPI 173 (343)
T ss_dssp EETTSSCEEEEEECC-CSCEEEEEECSSTTEEEEEETTS--------CEEEEESSSCEEEECCTTTSCSSCEEEEEECCC
T ss_pred EECCCCcEEEEEcCC-CCcEEEEEECCCCCEEEEEcCCC--------EEEEEeccCCceeeeecccCCCceeeeeeeccc
Confidence 356788888888876 78999999999888888888775 9999999854433322 2245589999999986
Q ss_pred c------------ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 85 Y------------VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 85 ~------------l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
. ++ ++.|+.|++||. +++...++.+ |..+|++++|+|||.+|++|+.|++|++|++...
T Consensus 174 ~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~-h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~ 245 (343)
T 2xzm_R 174 MKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKA-HESNVNHLSISPNGKYIATGGKDKKLLIWDILNL 245 (343)
T ss_dssp CCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEEC-CSSCEEEEEECTTSSEEEEEETTCEEEEEESSCC
T ss_pred cccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcC-ccccceEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 2 34 468999999994 5777888888 6999999999999999999999999999998543
No 35
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.72 E-value=1.6e-16 Score=138.81 Aligned_cols=119 Identities=12% Similarity=0.194 Sum_probs=96.2
Q ss_pred EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC--ceeEEecCCCCCCeeEEEEcCC--c--ee-e
Q psy2083 16 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD--KPLRVKDHMYGLPIRDIKFHDN--Y--VL-S 88 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~--~pl~~~~h~~~~pI~sI~F~~d--~--l~-S 88 (248)
.+.+ |.+.|.+++|+|++..+++++.|+ +|+|||+..+ +++.+. .+|..+|++|+|+++ + ++ +
T Consensus 4 ~~~~-h~~~V~~~~~s~~g~~las~s~D~--------~v~iw~~~~~~~~~~~~l-~gH~~~V~~v~~s~~~~g~~l~s~ 73 (297)
T 2pm7_B 4 IANA-HNEMIHDAVMDYYGKRMATCSSDK--------TIKIFEVEGETHKLIDTL-TGHEGPVWRVDWAHPKFGTILASC 73 (297)
T ss_dssp ECCS-CSSCEEEEEECTTSSEEEEEETTS--------CEEEEEBCSSCBCCCEEE-CCCSSCEEEEEECCGGGCSEEEEE
T ss_pred eccC-CcCceEEEEECCCCCEEEEEeCCC--------EEEEEecCCCCcEEEEEE-ccccCCeEEEEecCCCcCCEEEEE
Confidence 3444 478999999999888888888775 9999999754 455554 244589999999753 3 44 4
Q ss_pred eCCCeEEEEECCCCC--EEEEeecCCCCCeeEEEEeCC--CCEEEEEeCCCeEEEEEcCCC
Q psy2083 89 MDSSVVKIWSKDNGS--LFTCIESGDQTQFNNLCHIPE--SGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 89 sdd~~IKIWD~~tGk--~~~tie~~h~~~In~l~~~pd--sgll~sa~ed~~I~~w~Ip~l 145 (248)
+.|++|+|||.++|+ .+..+.. |...|++++|+|+ |.+|++|+.|++|++|++..-
T Consensus 74 s~D~~v~iWd~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 74 SYDGKVMIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp ETTTEEEEEEBSSSCBCCCEEECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred cCCCEEEEEEcCCCceEEEEEeec-CCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 689999999999884 5666776 6899999999998 889999999999999998753
No 36
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.72 E-value=2e-16 Score=148.07 Aligned_cols=120 Identities=16% Similarity=0.349 Sum_probs=102.1
Q ss_pred hcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e
Q psy2083 9 DKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V 86 (248)
Q Consensus 9 ~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l 86 (248)
.+++++..+.+| ...|.+++|+|++.++++++.|+ +|++||. +++++.... +|..+|++|+|+|++ |
T Consensus 455 ~~~~~~~~~~~~-~~~v~~~~~spd~~~las~~~d~--------~i~iw~~-~~~~~~~~~-~h~~~v~~l~~s~dg~~l 523 (577)
T 2ymu_A 455 RNGQLLQTLTGH-SSSVRGVAFSPDGQTIASASDDK--------TVKLWNR-NGQLLQTLT-GHSSSVRGVAFSPDGQTI 523 (577)
T ss_dssp TTSCEEEEEECC-SSCEEEEEECTTSCEEEEEETTS--------EEEEEET-TSCEEEEEE-CCSSCEEEEEECTTSSCE
T ss_pred CCCCEEEEEcCC-CCCEEEEEEcCCCCEEEEEeCCC--------EEEEEcC-CCCEEEEEe-CCCCCEEEEEEcCCCCEE
Confidence 467788887776 78999999999888888877775 9999995 566666542 344899999999998 5
Q ss_pred e-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 87 L-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 87 ~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+ +++|+.|+|||. +|+++.++.+ |...|++++|+|||.+|++++.|++|++|+
T Consensus 524 ~s~~~dg~v~lwd~-~~~~~~~~~~-h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 524 ASASDDKTVKLWNR-NGQLLQTLTG-HSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEETTSEEEEECT-TSCEEEEEEC-CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEECcCEEEEEeC-CCCEEEEEcC-CCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 4 468999999995 6999999998 799999999999999999999999999996
No 37
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.72 E-value=2.6e-16 Score=134.89 Aligned_cols=120 Identities=9% Similarity=0.108 Sum_probs=97.7
Q ss_pred cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc----eeEEecCCCCCCeeEEEEcC--Cc--ee-ee
Q psy2083 19 SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK----PLRVKDHMYGLPIRDIKFHD--NY--VL-SM 89 (248)
Q Consensus 19 ~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~----pl~~~~h~~~~pI~sI~F~~--d~--l~-Ss 89 (248)
.+|.+.|++++|+|++..+++++.|+ +|++||++++. ++... ..|..+|++|+|+| ++ ++ ++
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg--------~i~iw~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~d~~~l~s~~ 78 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQ--------HIKVFKLDKDTSNWELSDSW-RAHDSSIVAIDWASPEYGRIIASAS 78 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTS--------EEEEEEECSSSCCEEEEEEE-ECCSSCEEEEEECCGGGCSEEEEEE
T ss_pred cccccceeEEEEcCCCCEEEEeeCCC--------eEEEEECCCCCCcceeccee-ccCCCcEEEEEEcCCCCCCEEEEEc
Confidence 34589999999999887788877774 99999999863 33322 34458999999998 34 44 56
Q ss_pred CCCeEEEEECCCC---------CEEEEeecCCCCCeeEEEEeCC--CCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 90 DSSVVKIWSKDNG---------SLFTCIESGDQTQFNNLCHIPE--SGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 90 dd~~IKIWD~~tG---------k~~~tie~~h~~~In~l~~~pd--sgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
.|+.|+|||.+++ +++..+.. |...|++++|+|+ +.+|++++.|+.|++|++......
T Consensus 79 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~ 147 (351)
T 3f3f_A 79 YDKTVKLWEEDPDQEECSGRRWNKLCTLND-SKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDL 147 (351)
T ss_dssp TTSCEEEEEECTTSCTTSSCSEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCT
T ss_pred CCCeEEEEecCCCcccccccCcceeeeecc-cCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHh
Confidence 8999999999987 56778887 6899999999999 999999999999999998765443
No 38
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.71 E-value=1.6e-16 Score=153.00 Aligned_cols=124 Identities=9% Similarity=0.139 Sum_probs=102.4
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL 87 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~ 87 (248)
|..+.++.+| .+.|++++|+|++.. +++++.|+ +|+|||+++++.+.+. .+|..+|++|+|+|++ ++
T Consensus 137 ~~~~~~l~gh-~~~v~~v~f~p~~~~~l~s~s~D~--------~v~lwd~~~~~~~~~l-~~H~~~V~~v~fspdg~~la 206 (611)
T 1nr0_A 137 GTSNGNLTGQ-ARAMNSVDFKPSRPFRIISGSDDN--------TVAIFEGPPFKFKSTF-GEHTKFVHSVRYNPDGSLFA 206 (611)
T ss_dssp CCBCBCCCCC-SSCEEEEEECSSSSCEEEEEETTS--------CEEEEETTTBEEEEEE-CCCSSCEEEEEECTTSSEEE
T ss_pred CCCcceecCC-CCCceEEEECCCCCeEEEEEeCCC--------eEEEEECCCCeEeeee-ccccCceEEEEECCCCCEEE
Confidence 4444455554 789999999998876 66666664 9999999988776664 2445899999999998 44
Q ss_pred -eeCCCeEEEEECCCCCEEEEeec------CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 88 -SMDSSVVKIWSKDNGSLFTCIES------GDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 88 -Ssdd~~IKIWD~~tGk~~~tie~------~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++.|++|+|||..+|+.+..+.. +|...|++++|+|||.+|++|+.|++|++|++..
T Consensus 207 s~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 207 STGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT 270 (611)
T ss_dssp EEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCC
Confidence 46899999999999999998852 3789999999999999999999999999999865
No 39
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.71 E-value=2.5e-16 Score=143.07 Aligned_cols=131 Identities=9% Similarity=0.156 Sum_probs=102.1
Q ss_pred cchhcCceeEEEe------cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce------------eEE
Q psy2083 6 LRQDKGSLFTCIE------SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP------------LRV 67 (248)
Q Consensus 6 ~~~~~G~~~~~~~------~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p------------l~~ 67 (248)
.|..+|+++..+. .+|.+.|.+++|+|++..+++++.|+ +|++||+++... ...
T Consensus 234 wd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~--------~v~~wd~~~~~~~~~~~~~~~~~~~~~ 305 (393)
T 1erj_A 234 WDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR--------SVKLWNLQNANNKSDSKTPNSGTCEVT 305 (393)
T ss_dssp EETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTS--------EEEEEEC---------------CEEEE
T ss_pred EECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCC--------EEEEEECCCCCCcccccCCCCCcceEE
Confidence 3556677666652 34578999999999888788877775 999999987432 222
Q ss_pred ecCCCCCCeeEEEEcCCc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC------CCCEEEEEeCCCeEE
Q psy2083 68 KDHMYGLPIRDIKFHDNY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP------ESGMMFIANENKKIL 138 (248)
Q Consensus 68 ~~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p------dsgll~sa~ed~~I~ 138 (248)
. .+|...|.+++|++++ ++ ++.|+.|+|||.++|+++..+.+ |...|++++|+| ++.+|++|+.|++|+
T Consensus 306 ~-~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~-h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~ 383 (393)
T 1erj_A 306 Y-IGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG-HRNSVISVAVANGSSLGPEYNVFATGSGDCKAR 383 (393)
T ss_dssp E-ECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSCTTCTTCEEEEEEETTSEEE
T ss_pred E-ecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECC-CCCCEEEEEecCCcCcCCCCCEEEEECCCCcEE
Confidence 2 2344899999999987 44 46899999999999999999998 699999999986 688999999999999
Q ss_pred EEEcCCCC
Q psy2083 139 TYYIPSLG 146 (248)
Q Consensus 139 ~w~Ip~lG 146 (248)
+|++..+.
T Consensus 384 iW~~~~~~ 391 (393)
T 1erj_A 384 IWKYKKIA 391 (393)
T ss_dssp EEEEEEC-
T ss_pred ECcccccC
Confidence 99987543
No 40
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.71 E-value=4.2e-16 Score=134.03 Aligned_cols=117 Identities=11% Similarity=0.178 Sum_probs=98.2
Q ss_pred CCCeeEEEEeCCCCcEEE-eecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee--CCCeEE
Q psy2083 22 QTQFNNLCHIPESGMMFI-ANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM--DSSVVK 95 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~-ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss--dd~~IK 95 (248)
.+.|..+.+.|+++.++. ++++ .+++|++||.+.........+. .+|..+.|+++. ++++ .|+.|+
T Consensus 196 ~~~v~~~~~~~~~~~~~~~~~~~------~~~~i~lwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~sg~~d~~i~ 267 (318)
T 4ggc_A 196 QGAVKAVAWCPWQSNVLATGGGT------SDRHIRIWNVCSGACLSAVDAH--SQVCSILWSPHYKELISGHGFAQNQLV 267 (318)
T ss_dssp CSCEEEEEECTTSTTEEEEEECT------TTCEEEEEETTTCCEEEEEECS--SCEEEEEEETTTTEEEEEECTTTCCEE
T ss_pred CCceEEEEecCCCCcEEEEEecC------CCCEEEEEecccccccccccce--eeeeeeeecccccceEEEEEcCCCEEE
Confidence 578899999998777553 2222 2469999999998877776655 789999999986 3333 689999
Q ss_pred EEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCC
Q psy2083 96 IWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 96 IWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~ 147 (248)
|||.++|+++.++.+ |..+|++++|+|||.+|++|+.|++|++|++..+-|
T Consensus 268 iwd~~~~~~~~~l~g-H~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~dP 318 (318)
T 4ggc_A 268 IWKYPTMAKVAELKG-HTSRVLSLTMSPDGATVASAAADETLRLWRCFELDP 318 (318)
T ss_dssp EEETTTCCEEEEECC-CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCCC
T ss_pred EEECCCCcEEEEEcC-CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCC
Confidence 999999999999998 799999999999999999999999999999977654
No 41
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.71 E-value=2.2e-16 Score=141.00 Aligned_cols=137 Identities=14% Similarity=0.197 Sum_probs=109.6
Q ss_pred cchhcCceeEEEecCC-----CCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeE
Q psy2083 6 LRQDKGSLFTCIESGD-----QTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRD 78 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~-----~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~s 78 (248)
.|..+++.+..+..++ ...|.+++|+|+++. +++++.++ .+++|++||++++ .++......|..+|++
T Consensus 193 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-----~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~ 267 (416)
T 2pm9_A 193 WDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD-----NDPSILIWDLRNANTPLQTLNQGHQKGILS 267 (416)
T ss_dssp EETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS-----SSCCCCEEETTSTTSCSBCCCSCCSSCEEE
T ss_pred EECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCC-----CCceEEEEeCCCCCCCcEEeecCccCceeE
Confidence 4566788888877643 578999999998765 44554442 1238999999997 6666554245589999
Q ss_pred EEEcC-Cc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 79 IKFHD-NY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 79 I~F~~-d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~a 148 (248)
++|+| ++ ++ ++.|+.|+|||.++++++.++.. |...|++++|+|++ .+|++++.|++|++|++....+.
T Consensus 268 ~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 268 LDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA-RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp EEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC-SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCS
T ss_pred EEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC-CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCC
Confidence 99999 65 44 46899999999999999999998 68999999999999 89999999999999999876543
No 42
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.71 E-value=3.5e-16 Score=146.50 Aligned_cols=116 Identities=16% Similarity=0.326 Sum_probs=98.7
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee-eCC
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS-MDS 91 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S-sdd 91 (248)
..+++| .+.|++++|+||+.++++++.|+ +|+|||. +++++.+.. +|..+|++|+|+|++ |++ +.|
T Consensus 10 ~~L~GH-~~~V~~~a~spdg~~las~~~d~--------~v~iWd~-~~~~~~~l~-gh~~~V~~l~fspdg~~las~~~d 78 (577)
T 2ymu_A 10 NRLEAH-SSSVRGVAFSPDGQTIASASDDK--------TVKLWNR-NGQLLQTLT-GHSSSVWGVAFSPDGQTIASASDD 78 (577)
T ss_dssp EEECCC-SSCEEEEEECTTSSCEEEEETTS--------EEEEECT-TSCEEEEEE-CCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEECCC-CCcEEEEEECCCCCEEEEEeCCC--------EEEEEEC-CCCEEEEEe-CCCCCEEEEEECCCCCEEEEEeCC
Confidence 446776 79999999999988888887774 9999995 677776642 345899999999998 554 589
Q ss_pred CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 92 SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 92 ~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++|+|||. +|+++.++.+ |..+|++++|+||+.+|++++.|+.+.+|+..
T Consensus 79 ~~i~vWd~-~~~~~~~~~~-~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~ 128 (577)
T 2ymu_A 79 KTVKLWNR-NGQLLQTLTG-HSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 128 (577)
T ss_dssp SCEEEEET-TSCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CEEEEEEC-CCCEEEEEEC-CCCCEEEEEECCCCCEEEEEcCCCceeecccc
Confidence 99999995 6899999998 69999999999999999999999999999853
No 43
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.70 E-value=2.6e-16 Score=141.37 Aligned_cols=171 Identities=12% Similarity=0.072 Sum_probs=124.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC--CCCCC--------
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH--MYGLP-------- 75 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h--~~~~p-------- 75 (248)
.|..+|+.+..+.+| .+.|.+++|+|++..+++++.|+ +|++||+++++++..... .+..+
T Consensus 166 wd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~d~--------~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 236 (420)
T 3vl1_A 166 WSVKDGSNPRTLIGH-RATVTDIAIIDRGRNVLSASLDG--------TIRLWECGTGTTIHTFNRKENPHDGVNSIALFV 236 (420)
T ss_dssp EETTTCCCCEEEECC-SSCEEEEEEETTTTEEEEEETTS--------CEEEEETTTTEEEEEECBTTBTTCCEEEEEEEE
T ss_pred EeCCCCcCceEEcCC-CCcEEEEEEcCCCCEEEEEcCCC--------cEEEeECCCCceeEEeecCCCCCCCccEEEEec
Confidence 466778888888776 78999999999888788877775 899999999988876531 22234
Q ss_pred -------------eeEEEEcCCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC-EEEEEeCCCeEE
Q psy2083 76 -------------IRDIKFHDNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKIL 138 (248)
Q Consensus 76 -------------I~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg-ll~sa~ed~~I~ 138 (248)
|++++|+|++ ++++.|+.|+|||.++++.+..+..+|..+|++++|+|++. +|++|+.|+.|+
T Consensus 237 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~ 316 (420)
T 3vl1_A 237 GTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLA 316 (420)
T ss_dssp CCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred CCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEE
Confidence 4445556776 44568999999999999988888765688999999999998 999999999999
Q ss_pred EEEcCCCCCCCCccccccchhhhhhcccc--ccccCCceeecHhHHhhcCCccccC
Q psy2083 139 TYYIPSLGPAPKWCGFLDNLTEELEENII--ENVYDDYKFVTRQELEDLGLGHLIG 192 (248)
Q Consensus 139 ~w~Ip~lG~aP~wcs~ld~~tee~e~~~~--~~~yd~y~fvt~~~l~~l~~~~lig 192 (248)
+|++..... | +..+... ..... -...++-.++|-.+...+.+|.+-.
T Consensus 317 vwd~~~~~~-~-----~~~~~~~-~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 317 QWDLRSPEC-P-----VGEFLIN-EGTPINNVYFAAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EEETTCTTS-C-----SEEEEES-TTSCEEEEEEETTEEEEEETTTEEEEEEEECC
T ss_pred EEEcCCCcC-c-----hhhhhcc-CCCCceEEEeCCCCEEEEecCCccEEEEeccC
Confidence 999876321 1 1111100 00011 1223555777877777777777544
No 44
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.70 E-value=9.1e-16 Score=133.12 Aligned_cols=132 Identities=11% Similarity=0.111 Sum_probs=110.4
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCcee----------------------------------eeecCCeeEE
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKI----------------------------------LTYYIPAFYL 56 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~----------------------------------~~~~~G~V~L 56 (248)
+.+..++.+| .+.|.+++|+|++..+++++.|+.+ .++.||.+++
T Consensus 76 ~~~~~~l~~h-~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~ 154 (340)
T 4aow_A 76 GIPQRALRGH-SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 154 (340)
T ss_dssp EEEEEEECCC-SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEE
T ss_pred ceeeEEEeCC-CCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEE
Confidence 3355566665 7899999999988888888776532 5678899999
Q ss_pred EEcCCCceeEEecCCCCCCeeEEEEcCCc-----eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEE
Q psy2083 57 YDIRADKPLRVKDHMYGLPIRDIKFHDNY-----VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIA 131 (248)
Q Consensus 57 wDlRs~~pl~~~~h~~~~pI~sI~F~~d~-----l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa 131 (248)
||++...+.......|..+|..++|+++. +.++.|++|++||.++++++..+.+ |..+|++++|+|++.+|++|
T Consensus 155 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~ 233 (340)
T 4aow_A 155 WNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIG-HTGYLNTVTVSPDGSLCASG 233 (340)
T ss_dssp ECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEE
T ss_pred EEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecC-CCCcEEEEEECCCCCEEEEE
Confidence 99998876666555666899999999874 3456899999999999999999998 69999999999999999999
Q ss_pred eCCCeEEEEEcCC
Q psy2083 132 NENKKILTYYIPS 144 (248)
Q Consensus 132 ~ed~~I~~w~Ip~ 144 (248)
+.|++|++|++..
T Consensus 234 s~Dg~i~iwd~~~ 246 (340)
T 4aow_A 234 GKDGQAMLWDLNE 246 (340)
T ss_dssp ETTCEEEEEETTT
T ss_pred eCCCeEEEEEecc
Confidence 9999999999875
No 45
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.70 E-value=4e-16 Score=151.66 Aligned_cols=129 Identities=9% Similarity=0.153 Sum_probs=109.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe--cCCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK--DHMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~--~h~~~~pI~sI~F~~ 83 (248)
.|..+|++...+.+| .+.|.+++|+|++..+++++.|+ +|+|||++........ ..+|...|++++|+|
T Consensus 457 wd~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~D~--------~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 527 (694)
T 3dm0_A 457 WDLAAGVSTRRFVGH-TKDVLSVAFSLDNRQIVSASRDR--------TIKLWNTLGECKYTISEGGEGHRDWVSCVRFSP 527 (694)
T ss_dssp EETTTTEEEEEEECC-SSCEEEEEECTTSSCEEEEETTS--------CEEEECTTSCEEEEECSSTTSCSSCEEEEEECS
T ss_pred EECCCCcceeEEeCC-CCCEEEEEEeCCCCEEEEEeCCC--------EEEEEECCCCcceeeccCCCCCCCcEEEEEEeC
Confidence 456678888888876 78999999999988888888875 9999999876544432 235568899999999
Q ss_pred Cc----ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 84 NY----VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 84 d~----l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+. ++ ++.|++|+|||.+++++..++.+ |...|++++|+|+|.+|++|+.|++|++|++..
T Consensus 528 ~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~-h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~ 592 (694)
T 3dm0_A 528 NTLQPTIVSASWDKTVKVWNLSNCKLRSTLAG-HTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAE 592 (694)
T ss_dssp CSSSCEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSBCEEEETTT
T ss_pred CCCcceEEEEeCCCeEEEEECCCCcEEEEEcC-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 74 44 56899999999999999999998 699999999999999999999999999999865
No 46
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.70 E-value=1.2e-15 Score=133.00 Aligned_cols=127 Identities=9% Similarity=0.105 Sum_probs=108.4
Q ss_pred cchhc-CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDK-GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~-G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
+|..+ ++.+..+..+ .+.|.+++|+|++..+++++.++ .|++||+++++++....+. .++.++.|+|+
T Consensus 202 ~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~--------~i~v~d~~~~~~~~~~~~~--~~~~~~~~~~~ 270 (369)
T 3zwl_B 202 YDVSNNYEYVDSIDLH-EKSISDMQFSPDLTYFITSSRDT--------NSFLVDVSTLQVLKKYETD--CPLNTAVITPL 270 (369)
T ss_dssp EETTTTTEEEEEEECC-SSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTCCEEEEEECS--SCEEEEEECSS
T ss_pred EECCCCcEeEEEEecC-CCceeEEEECCCCCEEEEecCCc--------eEEEEECCCCceeeeecCC--CCceeEEecCC
Confidence 34555 6677777776 68999999999887777777764 8999999999988877655 89999999999
Q ss_pred c---eeeeCCC--------------eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 85 Y---VLSMDSS--------------VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 85 ~---l~Ssdd~--------------~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ ++++.++ .|++||..+++.+..+.+ |...|++++|+|++.+|++++.|++|++|++..
T Consensus 271 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 271 KEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQG-HFGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp SSEEEEEECCC-------------CEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred CceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheec-ccCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 7 4444555 899999999999999998 689999999999999999999999999999764
No 47
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.70 E-value=3.3e-16 Score=140.89 Aligned_cols=135 Identities=11% Similarity=0.119 Sum_probs=106.6
Q ss_pred eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCe-eEEEEcCCCceeEEecCC-CCCCeeEEEEcCCc--e-ee
Q psy2083 14 FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPA-FYLYDIRADKPLRVKDHM-YGLPIRDIKFHDNY--V-LS 88 (248)
Q Consensus 14 ~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~-V~LwDlRs~~pl~~~~h~-~~~pI~sI~F~~d~--l-~S 88 (248)
+..+.+| .+.|++++|+|++.++++++.|+ + |+|||+++++++.....+ |..+|++++|+|++ + ++
T Consensus 188 ~~~~~~h-~~~v~~~~~s~~g~~l~s~s~d~--------~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~ 258 (355)
T 3vu4_A 188 GVLIKAH-TNPIKMVRLNRKSDMVATCSQDG--------TIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVV 258 (355)
T ss_dssp CEEECCC-SSCEEEEEECTTSSEEEEEETTC--------SEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEE
T ss_pred cEEEEcc-CCceEEEEECCCCCEEEEEeCCC--------CEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEE
Confidence 5667765 79999999999887787877774 8 999999999998877533 55899999999997 4 45
Q ss_pred eCCCeEEEEECCCCCEE--EE--------------------eecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Q psy2083 89 MDSSVVKIWSKDNGSLF--TC--------------------IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLG 146 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~--~t--------------------ie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG 146 (248)
++|++|+|||.+++... .. +...+..+...++|+|||+.|++++.|+++..|.+..-+
T Consensus 259 s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 259 SDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp ETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred ECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 68999999999865311 11 111112234678999999999999999999999998888
Q ss_pred CCCCccccccc
Q psy2083 147 PAPKWCGFLDN 157 (248)
Q Consensus 147 ~aP~wcs~ld~ 157 (248)
...+||-.++.
T Consensus 339 ~~~~~~~~~~~ 349 (355)
T 3vu4_A 339 EMERWLIQMDQ 349 (355)
T ss_dssp TTTEEEEEEEE
T ss_pred CCceEEEeeCc
Confidence 88899977664
No 48
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.70 E-value=3.4e-17 Score=157.30 Aligned_cols=127 Identities=6% Similarity=0.060 Sum_probs=100.2
Q ss_pred cchhcCc-eeEEEecCCCCCeeEEE-EeCCCC--cEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEE
Q psy2083 6 LRQDKGS-LFTCIESGDQTQFNNLC-HIPESG--MMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIK 80 (248)
Q Consensus 6 ~~~~~G~-~~~~~~~~~~~~V~~~~-~~~~~g--~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~ 80 (248)
.|..++. ...++.+| .+.|++++ +++++| +++++|.|+ +|+|||+|+++++.+. .|..+..|.+|+
T Consensus 292 WD~~~~~~~~~~~~~H-~~~V~sv~~~~s~~g~~~laS~S~D~--------tvklWD~~~~~~~~~~~~~~~~~~v~~v~ 362 (524)
T 2j04_B 292 FDLTDPEVPSFYDQVH-DSYILSVSTAYSDFEDTVVSTVAVDG--------YFYIFNPKDIATTKTTVSRFRGSNLVPVV 362 (524)
T ss_dssp EETTBCSSCSEEEECS-SSCEEEEEEECCTTSCCEEEEEETTS--------EEEEECGGGHHHHCEEEEECSCCSCCCEE
T ss_pred EECCCCCCceEEeecc-cccEEEEEEEcCCCCCeEEEEeccCC--------eEEEEECCCCCcccccccccccCcccceE
Confidence 3455553 45566665 68999994 455544 456666664 9999999998765443 454334689999
Q ss_pred EcCCc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 81 FHDNY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 81 F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
|+|++ ++ +++|++|||||.+++.++.++.+ |...|++|+|+|+|.+|++|+.|++|++|++
T Consensus 363 fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g-H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 363 YCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS-RETTITAIGVSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp EETTTTEEEEECSSSEEEEEETTCTTCCEEEEE-CSSCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred eCCCcCeEEEeCCCCcEEEEECcccccceeeec-CCCceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence 99986 44 46899999999999999889998 6999999999999999999999999999985
No 49
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.70 E-value=5.1e-16 Score=135.45 Aligned_cols=128 Identities=12% Similarity=0.162 Sum_probs=102.7
Q ss_pred chhcCceeEEEec----CCCCCeeEEEEeCCC----CcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeE
Q psy2083 7 RQDKGSLFTCIES----GDQTQFNNLCHIPES----GMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRD 78 (248)
Q Consensus 7 ~~~~G~~~~~~~~----~~~~~V~~~~~~~~~----g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~s 78 (248)
+..+++.+..+.. .|...|.+++|+|++ .++++++.|+ +|++||+++++++.... .|..+|++
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg--------~i~v~d~~~~~~~~~~~-~~~~~i~~ 120 (366)
T 3k26_A 50 ECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG--------IIRIINPITMQCIKHYV-GHGNAINE 120 (366)
T ss_dssp EECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC--------EEEEECTTTCCEEEEEE-SCCSCEEE
T ss_pred EcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC--------EEEEEEchhceEeeeec-CCCCcEEE
Confidence 3445555555542 235789999999983 3566666664 99999999998877653 34489999
Q ss_pred EEEcC-Cc--ee-eeCCCeEEEEECCCCCEEEEe---ecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 79 IKFHD-NY--VL-SMDSSVVKIWSKDNGSLFTCI---ESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 79 I~F~~-d~--l~-Ssdd~~IKIWD~~tGk~~~ti---e~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++|+| ++ ++ ++.|+.|+|||.++++.+..+ .+ |...|++++|+|++.+|++++.|+.|.+|++..
T Consensus 121 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 121 LKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEG-HRDEVLSADYDLLGEKIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTS-CSSCEEEEEECTTSSEEEEEETTSCEEEEESCS
T ss_pred EEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccccc-ccCceeEEEECCCCCEEEEecCCCCEEEEECCC
Confidence 99999 65 44 468999999999999999998 55 689999999999999999999999999999864
No 50
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.70 E-value=7.6e-16 Score=137.01 Aligned_cols=133 Identities=9% Similarity=0.102 Sum_probs=108.5
Q ss_pred cchhcCceeEEEecC--C---CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCC---------
Q psy2083 6 LRQDKGSLFTCIESG--D---QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHM--------- 71 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~--~---~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~--------- 71 (248)
+|..+++.+..+... | ...|.+++|+|++..+++++.++ ..|.|++||+++++++......
T Consensus 212 ~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~-----~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 286 (397)
T 1sq9_A 212 SELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN-----SFGCITLYETEFGERIGSLSVPTHSSQASLG 286 (397)
T ss_dssp EETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET-----TEEEEEEEETTTCCEEEEECBC--------C
T ss_pred EECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC-----CCceEEEEECCCCcccceeccCccccccccc
Confidence 466678888887761 3 47899999999887777777661 0028999999999888775310
Q ss_pred ---CCCCeeEEEEcCCc--ee-eeCCCeEEEEECCCCCEEEEee------cCC---------------CCCeeEEEEeCC
Q psy2083 72 ---YGLPIRDIKFHDNY--VL-SMDSSVVKIWSKDNGSLFTCIE------SGD---------------QTQFNNLCHIPE 124 (248)
Q Consensus 72 ---~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie------~~h---------------~~~In~l~~~pd 124 (248)
|..+|.+++|+|++ ++ ++.|+.|+|||.++++++.++. . | ..+|++++|+|+
T Consensus 287 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~~~~~~~~ 365 (397)
T 1sq9_A 287 EFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIE-IEEDILAVDEHGDSLAEPGVFDVKFLKK 365 (397)
T ss_dssp CBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCS-SGGGCCCBCTTSCBCSSCCEEEEEEECT
T ss_pred ccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCccc-chhhhhccccccccccCCceeEEEeccc
Confidence 34899999999987 44 4689999999999999999999 6 5 789999999999
Q ss_pred C----------CEEEEEeCCCeEEEEEcCC
Q psy2083 125 S----------GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 125 s----------gll~sa~ed~~I~~w~Ip~ 144 (248)
+ .+|++|+.|+.|++|++..
T Consensus 366 g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 366 GWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp TTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred cccccccccccceEEEecCCCcEEEEEcCC
Confidence 8 7999999999999999753
No 51
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.70 E-value=1.4e-15 Score=136.84 Aligned_cols=133 Identities=9% Similarity=0.166 Sum_probs=101.6
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCcee------------------------------e--eecCCe
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKI------------------------------L--TYYIPA 53 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~------------------------------~--~~~~G~ 53 (248)
.|..+|+++..+..+ +.|.++++.++. ++++.++ .+ . |+.+|+
T Consensus 86 Wd~~~~~~~~~~~~~--~~v~~v~~~~~~--~~~~~~~-~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~ 160 (355)
T 3vu4_A 86 WDDVKKQDVSRIKVD--APVKDLFLSREF--IVVSYGD-VISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQ 160 (355)
T ss_dssp EETTTTEEEEEEECS--SCEEEEEECSSE--EEEEETT-EEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTC
T ss_pred EECCCCcEEEEEECC--CceEEEEEcCCE--EEEEEcC-EEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcE
Confidence 356788888888753 678888887642 2222211 11 0 466789
Q ss_pred eEEEEcCCCc---------------e-eEEecCCCCCCeeEEEEcCCc--ee-eeCCCe-EEEEECCCCCEEEEee-cCC
Q psy2083 54 FYLYDIRADK---------------P-LRVKDHMYGLPIRDIKFHDNY--VL-SMDSSV-VKIWSKDNGSLFTCIE-SGD 112 (248)
Q Consensus 54 V~LwDlRs~~---------------p-l~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~-IKIWD~~tGk~~~tie-~~h 112 (248)
|++||+++++ | +... .+|..+|++|+|+|++ ++ ++.|++ |+|||.++|+++.++. +.|
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~-~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h 239 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLI-KAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLD 239 (355)
T ss_dssp EEEEECCC------------------CCEEE-CCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTC
T ss_pred EEEEECCCCCccccccccccccccCcccEEE-EccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC
Confidence 9999999865 3 3433 2445899999999998 44 468998 9999999999999998 326
Q ss_pred CCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 113 QTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 113 ~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
..+|++++|+|||.+|++++.|++|++|++..
T Consensus 240 ~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 240 RADVVDMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp CSCEEEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred CCcEEEEEECCCCCEEEEEECCCEEEEEEccC
Confidence 89999999999999999999999999999976
No 52
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.70 E-value=1.8e-16 Score=140.85 Aligned_cols=131 Identities=8% Similarity=0.052 Sum_probs=99.7
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCcee-EEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPL-RVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl-~~~~h~~~~pI~sI~F~~d 84 (248)
.|..+|+++.....++...|.+++|+|++.++++++.|+ +|++||+++++++ ......|..+|++|+|+|+
T Consensus 154 wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg--------~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~ 225 (343)
T 3lrv_A 154 QSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG--------ILDVYNLSSPDQASSRFPVDEEAKIKEVKFADN 225 (343)
T ss_dssp EESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS--------CEEEEESSCTTSCCEECCCCTTSCEEEEEECTT
T ss_pred EECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC--------EEEEEECCCCCCCccEEeccCCCCEEEEEEeCC
Confidence 456678887777666566899999999877666666664 9999999999876 4443335589999999999
Q ss_pred c--eeeeCCCeEEEEECCCCCEEEEeec--CCCCCee--EEEEeCCCCEEEEEeC-CCeEEEEEcCC
Q psy2083 85 Y--VLSMDSSVVKIWSKDNGSLFTCIES--GDQTQFN--NLCHIPESGMMFIANE-NKKILTYYIPS 144 (248)
Q Consensus 85 ~--l~Ssdd~~IKIWD~~tGk~~~tie~--~h~~~In--~l~~~pdsgll~sa~e-d~~I~~w~Ip~ 144 (248)
+ ++++.++.|+|||.++++.+.++++ .|..+++ +++|+|+|.+|++++. |+.|++|++..
T Consensus 226 g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 226 GYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp SSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CCEEEEEeCCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcc
Confidence 7 5555455999999999987766553 0234555 5999999999999998 99999998754
No 53
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.69 E-value=7.5e-16 Score=134.60 Aligned_cols=120 Identities=12% Similarity=0.290 Sum_probs=94.9
Q ss_pred eeEEEecCCCCCeeEEEEeCC--CCcEEEeecCceeeeecCCeeEEEEcCCCc---eeEEecCCCCCCeeEEEEcCC---
Q psy2083 13 LFTCIESGDQTQFNNLCHIPE--SGMMFIANENKKILTYYIPAFYLYDIRADK---PLRVKDHMYGLPIRDIKFHDN--- 84 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~--~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~---pl~~~~h~~~~pI~sI~F~~d--- 84 (248)
.+..+..| ...|++++|+|+ +.++++++.|+ +|++||++++. +.....| ..+|++++|+|+
T Consensus 91 ~~~~~~~h-~~~v~~v~~~p~~~g~~l~s~s~d~--------~v~~wd~~~~~~~~~~~~~~h--~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 91 QIAVHAVH-SASVNSVQWAPHEYGPMLLVASSDG--------KVSVVEFKENGTTSPIIIDAH--AIGVNSASWAPATIE 159 (297)
T ss_dssp CCEEECCC-SSCEEEEEECCGGGCSEEEEEETTS--------EEEEEEBCSSSCBCCEEEECC--SSCEEEEEECCCC--
T ss_pred EEEEeecC-CCceeEEEeCcCCCCcEEEEEECCC--------cEEEEEecCCCceeeeeeecc--cCccceEeecCCccc
Confidence 44455554 688999999997 44566666664 99999999863 2233344 489999999986
Q ss_pred ----------c--ee-eeCCCeEEEEECCCCC----EEEEeecCCCCCeeEEEEeCCC---CEEEEEeCCCeEEEEEcCC
Q psy2083 85 ----------Y--VL-SMDSSVVKIWSKDNGS----LFTCIESGDQTQFNNLCHIPES---GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 85 ----------~--l~-Ssdd~~IKIWD~~tGk----~~~tie~~h~~~In~l~~~pds---gll~sa~ed~~I~~w~Ip~ 144 (248)
+ ++ ++.|++|||||.++++ ...++.+ |...|++++|+|++ .+|++|+.|++|++|++..
T Consensus 160 ~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~-H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG-HSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp ----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECC-CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred ccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecC-CCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 2 44 5689999999999877 6678887 69999999999995 8999999999999999865
No 54
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.69 E-value=1.5e-15 Score=129.89 Aligned_cols=123 Identities=15% Similarity=0.216 Sum_probs=102.5
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL 87 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~ 87 (248)
.++....+...|...|..++++|++. +++++.++ .|++||+++++++.... .|..+|++++|+|++ ++
T Consensus 172 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg--------~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~l~~ 241 (313)
T 3odt_A 172 NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDG--------LIKLVDMHTGDVLRTYE-GHESFVYCIKLLPNGDIVS 241 (313)
T ss_dssp TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTS--------EEEEEETTTCCEEEEEE-CCSSCEEEEEECTTSCEEE
T ss_pred cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCC--------eEEEEECCchhhhhhhh-cCCceEEEEEEecCCCEEE
Confidence 34556666664578999999998765 77776664 99999999999887753 234899999999997 55
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++.|+.|++||.++++++..+.. |..+|++++|+|++. +++++.|+.|++|++..
T Consensus 242 ~~~dg~v~iwd~~~~~~~~~~~~-~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 242 CGEDRTVRIWSKENGSLKQVITL-PAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp EETTSEEEEECTTTCCEEEEEEC-SSSCEEEEEECTTSC-EEEEETTSCEEEEESCG
T ss_pred EecCCEEEEEECCCCceeEEEec-cCceEEEEEEccCCC-EEEEeCCCcEEEEeCCC
Confidence 56899999999999999999998 588999999999998 66799999999999864
No 55
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.69 E-value=6.9e-16 Score=132.25 Aligned_cols=123 Identities=11% Similarity=0.125 Sum_probs=98.2
Q ss_pred ceeEEEecCCCCCeeEEEEeCC--CCcEEEeecCceeeeecCCeeEEEEcCCCcee------------------------
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPE--SGMMFIANENKKILTYYIPAFYLYDIRADKPL------------------------ 65 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~--~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl------------------------ 65 (248)
+.+..+..| .+.|.+++|+|+ +..+++++.|+ +|++||+++++++
T Consensus 101 ~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~dg--------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (351)
T 3f3f_A 101 NKLCTLNDS-KGSLYSVKFAPAHLGLKLACLGNDG--------ILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDF 171 (351)
T ss_dssp EEEEEECCC-SSCEEEEEECCGGGCSEEEEEETTC--------EEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCE
T ss_pred ceeeeeccc-CCceeEEEEcCCCCCcEEEEecCCC--------cEEEecCCChHHhccccccccccccccccCCccccee
Confidence 456666665 689999999998 66677777664 8999999876421
Q ss_pred -----------------------------------EEecCCCCCCeeEEEEcCC-----c-ee-eeCCCeEEEEECCCC-
Q psy2083 66 -----------------------------------RVKDHMYGLPIRDIKFHDN-----Y-VL-SMDSSVVKIWSKDNG- 102 (248)
Q Consensus 66 -----------------------------------~~~~h~~~~pI~sI~F~~d-----~-l~-Ssdd~~IKIWD~~tG- 102 (248)
......|..+|++++|+|+ . ++ ++.|+.|+|||.+++
T Consensus 172 ~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~ 251 (351)
T 3f3f_A 172 CLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKL 251 (351)
T ss_dssp EEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC
T ss_pred EEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCc
Confidence 1112245589999999998 4 44 468999999999875
Q ss_pred ---------------------------------------------CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeE
Q psy2083 103 ---------------------------------------------SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKI 137 (248)
Q Consensus 103 ---------------------------------------------k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I 137 (248)
+.+..+.+ |...|++++|+|++.+|++|+.|+.|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~~dg~v 330 (351)
T 3f3f_A 252 SPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD-HNGEVWSVSWNLTGTILSSAGDDGKV 330 (351)
T ss_dssp ---------------------------------------CCSEEEEEEEEECT-TSSCEEEEEECSSSCCEEEEETTSCE
T ss_pred CccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEec-ccccEEEEEEcCCCCEEEEecCCCcE
Confidence 56777777 68999999999999999999999999
Q ss_pred EEEEcCC
Q psy2083 138 LTYYIPS 144 (248)
Q Consensus 138 ~~w~Ip~ 144 (248)
++|++..
T Consensus 331 ~iw~~~~ 337 (351)
T 3f3f_A 331 RLWKATY 337 (351)
T ss_dssp EEEEECT
T ss_pred EEEecCc
Confidence 9999875
No 56
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.69 E-value=6.7e-16 Score=150.12 Aligned_cols=127 Identities=13% Similarity=0.196 Sum_probs=105.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..++++..++.+| .+.|++++|+|++.++++++.|+ +|+|||+++++++....+. .+|.+++|+|++
T Consensus 546 wd~~~~~~~~~~~~h-~~~v~~v~~spdg~~l~sg~~Dg--------~i~iwd~~~~~~~~~~~~~--~~v~~~~~sp~~ 614 (694)
T 3dm0_A 546 WNLSNCKLRSTLAGH-TGYVSTVAVSPDGSLCASGGKDG--------VVLLWDLAEGKKLYSLEAN--SVIHALCFSPNR 614 (694)
T ss_dssp EETTTCCEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------BCEEEETTTTEEEECCBCS--SCEEEEEECSSS
T ss_pred EECCCCcEEEEEcCC-CCCEEEEEEeCCCCEEEEEeCCC--------eEEEEECCCCceEEEecCC--CcEEEEEEcCCC
Confidence 355667788888776 78999999999888787877775 9999999999988776554 689999999998
Q ss_pred --eeeeCCCeEEEEECCCCCEEEEeecC------------------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 86 --VLSMDSSVVKIWSKDNGSLFTCIESG------------------DQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 --l~Ssdd~~IKIWD~~tGk~~~tie~~------------------h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++++.++.|+|||.++++.+..+..+ +...+++++|+|||.+|++|+.|++|++|++.
T Consensus 615 ~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 615 YWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp SEEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 66677888999999999988877531 01237899999999999999999999999975
No 57
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.69 E-value=8e-16 Score=138.99 Aligned_cols=118 Identities=8% Similarity=0.197 Sum_probs=98.1
Q ss_pred EEecCCCCCeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCC-------ceeEEecCCCCCCeeEEEEcCCc--
Q psy2083 16 CIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRAD-------KPLRVKDHMYGLPIRDIKFHDNY-- 85 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-------~pl~~~~h~~~~pI~sI~F~~d~-- 85 (248)
.+.+| .+.|.+++|+| ++..+++++.|+ +|+|||+.++ +++.... +|..+|++|+|+|++
T Consensus 76 ~~~~h-~~~V~~~~~~p~~~~~l~s~s~dg--------~v~vw~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~ 145 (402)
T 2aq5_A 76 LVCGH-TAPVLDIAWCPHNDNVIASGSEDC--------TVMVWEIPDGGLVLPLREPVITLE-GHTKRVGIVAWHPTAQN 145 (402)
T ss_dssp CBCCC-SSCEEEEEECTTCTTEEEEEETTS--------EEEEEECCTTCCSSCBCSCSEEEE-CCSSCEEEEEECSSBTT
T ss_pred eEecC-CCCEEEEEeCCCCCCEEEEEeCCC--------eEEEEEccCCCCccccCCceEEec-CCCCeEEEEEECcCCCC
Confidence 34444 78999999999 666666766664 9999999997 5655542 344899999999985
Q ss_pred -ee-eeCCCeEEEEECCCCCEEEEe--ecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VL-SMDSSVVKIWSKDNGSLFTCI--ESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~-Ssdd~~IKIWD~~tGk~~~ti--e~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.|+.|+|||.++++.+.++ .. |...|++++|+|++.+|++++.|++|++|++..
T Consensus 146 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 207 (402)
T 2aq5_A 146 VLLSAGCDNVILVWDVGTGAAVLTLGPDV-HPDTIYSVDWSRDGALICTSCRDKRVRVIEPRK 207 (402)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECTTT-CCSCEEEEEECTTSSCEEEEETTSEEEEEETTT
T ss_pred EEEEEcCCCEEEEEECCCCCccEEEecCC-CCCceEEEEECCCCCEEEEEecCCcEEEEeCCC
Confidence 44 468999999999999999999 66 689999999999999999999999999999865
No 58
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.69 E-value=1.4e-15 Score=134.53 Aligned_cols=133 Identities=13% Similarity=0.210 Sum_probs=102.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCc-eeEEec--------------
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADK-PLRVKD-------------- 69 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~-pl~~~~-------------- 69 (248)
+|..+++.+..+..| .+.|.+++|+|++.. +++++.| |.|++||++++. ++....
T Consensus 171 ~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~ll~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (408)
T 4a11_B 171 CDLKSGSCSHILQGH-RQEILAVSWSPRYDYILATASAD--------SRVKLWDVRRASGCLITLDQHNGKKSQAVESAN 241 (408)
T ss_dssp EESSSSCCCEEECCC-CSCEEEEEECSSCTTEEEEEETT--------SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSS
T ss_pred EeCCCcceeeeecCC-CCcEEEEEECCCCCcEEEEEcCC--------CcEEEEECCCCCcccccccccccccceeecccc
Confidence 455678888888776 689999999998886 5565555 499999999875 333321
Q ss_pred CCCCCCeeEEEEcCCc--e-eeeCCCeEEEEECCCC--------------------------------------------
Q psy2083 70 HMYGLPIRDIKFHDNY--V-LSMDSSVVKIWSKDNG-------------------------------------------- 102 (248)
Q Consensus 70 h~~~~pI~sI~F~~d~--l-~Ssdd~~IKIWD~~tG-------------------------------------------- 102 (248)
..|..+|++++|+|++ + +++.|+.|++||.+++
T Consensus 242 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~ 321 (408)
T 4a11_B 242 TAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTV 321 (408)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEET
T ss_pred ccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEEC
Confidence 2455899999999997 4 4467889999997654
Q ss_pred ---CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 103 ---SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 103 ---k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
+++..+.+ |..+|++++|+|++.+|++|+.|+.|.+|++....+.
T Consensus 322 ~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 322 YSGEQITMLKG-HYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp TTCCEEEEECC-CSSCEEEEEEETTTTEEEEEETTSCEEEEEECC----
T ss_pred cCCcceeeecc-CCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCcc
Confidence 45666676 6899999999999999999999999999998775443
No 59
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.68 E-value=2.4e-16 Score=143.15 Aligned_cols=130 Identities=12% Similarity=0.235 Sum_probs=106.8
Q ss_pred cchhcCceeEEEecC-CCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcC-
Q psy2083 6 LRQDKGSLFTCIESG-DQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHD- 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~-~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~- 83 (248)
.|..+++++..+..+ |.+.|++++|+|++..+++++.|+ +|++||+++++++......+..+|++++|+|
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg--------~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 268 (437)
T 3gre_A 197 FDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRG--------IIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF 268 (437)
T ss_dssp EETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTS--------CEEEEETTTTEEEEEEBCTTCEEEEEEEECTT
T ss_pred EeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCC--------eEEEEEcCCccEEEEEecCCCCceEEEEeccc
Confidence 467788999998873 468999999999877777777774 9999999999998876544457999997765
Q ss_pred ---Cc--eee-eCCCeEEEEECCCCCEEEEeecC-------------------------CCCCeeEEEEeCCCCEEEEEe
Q psy2083 84 ---NY--VLS-MDSSVVKIWSKDNGSLFTCIESG-------------------------DQTQFNNLCHIPESGMMFIAN 132 (248)
Q Consensus 84 ---d~--l~S-sdd~~IKIWD~~tGk~~~tie~~-------------------------h~~~In~l~~~pdsgll~sa~ 132 (248)
++ +++ +.|+.|+|||.++|+++.++.++ |...|++++|+ ++.+|++|+
T Consensus 269 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~ 347 (437)
T 3gre_A 269 YGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDE 347 (437)
T ss_dssp TCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEG
T ss_pred cCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecC
Confidence 44 444 57999999999999999888752 34568899999 779999999
Q ss_pred CCCeEEEEEcCC
Q psy2083 133 ENKKILTYYIPS 144 (248)
Q Consensus 133 ed~~I~~w~Ip~ 144 (248)
.|++|++|++..
T Consensus 348 ~d~~i~~wd~~~ 359 (437)
T 3gre_A 348 ATSSIVMFSLNE 359 (437)
T ss_dssp GGTEEEEEETTC
T ss_pred CCCeEEEEECCC
Confidence 999999999865
No 60
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.68 E-value=7.5e-16 Score=134.19 Aligned_cols=124 Identities=10% Similarity=0.192 Sum_probs=99.0
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCC---CcEEEeecCceeeeecCCeeEEEEcCC-CceeEEecCCCCCCeeEEEEcCCc
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPES---GMMFIANENKKILTYYIPAFYLYDIRA-DKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~---g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
..+.+..+.+| .+.|++++|+|++ .++++++.|+ +|+|||+++ +..+.....+|..+|++++|+|++
T Consensus 28 ~~~~~~~~~~h-~~~v~~~~~~~~~~~g~~l~~~~~dg--------~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 98 (368)
T 3mmy_A 28 PMKDIEVTSSP-DDSIGCLSFSPPTLPGNFLIAGSWAN--------DVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDG 98 (368)
T ss_dssp TTCCEECSSCC-SSCEEEEEECCTTSSSEEEEEEETTS--------EEEEEEECTTSCEEEEEEEECSSCEEEEEECTTS
T ss_pred CcceeEeccCC-CCceEEEEEcCCCCCceEEEEECCCC--------cEEEEEcCCCCceeEEEeccccCCEEEEEECcCC
Confidence 34566666665 7999999999985 4566666664 999999998 555533323345899999999997
Q ss_pred --ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEE--eCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 --VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCH--IPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~--~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.|+.|+|||.++++.+... . |..+|++++| +|++.+|++++.|+.|.+|++..
T Consensus 99 ~~l~s~~~dg~v~iwd~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 160 (368)
T 3mmy_A 99 SKVFTASCDKTAKMWDLSSNQAIQIA-Q-HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRS 160 (368)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEE-E-CSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSC
T ss_pred CEEEEEcCCCcEEEEEcCCCCceeec-c-ccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCC
Confidence 44 467999999999999887754 4 4899999999 89999999999999999999875
No 61
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.68 E-value=2.5e-15 Score=130.88 Aligned_cols=129 Identities=14% Similarity=0.131 Sum_probs=107.7
Q ss_pred cchhcCceeEE--EecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTC--IESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~--~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~ 83 (248)
-....|..... +.+| .+.|++++|+|++..+++++.|+ .|++||+.+++++.... .|..+|.+++|+|
T Consensus 15 ~~~~~G~~~~~~~l~~h-~~~v~~~~~s~~~~~l~~~~~dg--------~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~ 84 (369)
T 3zwl_B 15 NLYFQGSHMKAIKLTGH-ERPLTQVKYNKEGDLLFSCSKDS--------SASVWYSLNGERLGTLD-GHTGTIWSIDVDC 84 (369)
T ss_dssp CCCSSCCSEEEEEEECC-SSCEEEEEECTTSCEEEEEESSS--------CEEEEETTTCCEEEEEC-CCSSCEEEEEECT
T ss_pred ceEEeccccccEEEEEe-eceEEEEEEcCCCCEEEEEeCCC--------EEEEEeCCCchhhhhhh-hcCCcEEEEEEcC
Confidence 34446665555 4555 79999999999888788877774 89999999998887753 3348999999999
Q ss_pred Cc--e-eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC-----CeEEEEEcCCCC
Q psy2083 84 NY--V-LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN-----KKILTYYIPSLG 146 (248)
Q Consensus 84 d~--l-~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed-----~~I~~w~Ip~lG 146 (248)
++ + +++.|+.|++||.++++.+..+.. ..+|++++|+|++.+|++++.+ +.|.+|++..-.
T Consensus 85 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~ 153 (369)
T 3zwl_B 85 FTKYCVTGSADYSIKLWDVSNGQCVATWKS--PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDS 153 (369)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEEC--SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECT
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEeec--CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCc
Confidence 87 4 456899999999999999999985 8999999999999999999999 999999987644
No 62
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.68 E-value=3.4e-16 Score=140.62 Aligned_cols=129 Identities=12% Similarity=0.139 Sum_probs=103.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..++++...+.+| .+.|.+++|+|++..+++++.|+ +|++||+++++++.... +|..+|++++|+|++
T Consensus 124 wd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s~d~--------~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~ 193 (420)
T 3vl1_A 124 LDSNFNLQREIDQAH-VSEITKLKFFPSGEALISSSQDM--------QLKIWSVKDGSNPRTLI-GHRATVTDIAIIDRG 193 (420)
T ss_dssp ECTTSCEEEEETTSS-SSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTCCCCEEEE-CCSSCEEEEEEETTT
T ss_pred EeCCCcceeeecccc-cCccEEEEECCCCCEEEEEeCCC--------eEEEEeCCCCcCceEEc-CCCCcEEEEEEcCCC
Confidence 355667777766555 78999999999887787877775 99999999998776652 344899999999997
Q ss_pred --ee-eeCCCeEEEEECCCCCEEEEeecC--CCCC---------------------eeEEEEeCCCCEEEEEeCCCeEEE
Q psy2083 86 --VL-SMDSSVVKIWSKDNGSLFTCIESG--DQTQ---------------------FNNLCHIPESGMMFIANENKKILT 139 (248)
Q Consensus 86 --l~-Ssdd~~IKIWD~~tGk~~~tie~~--h~~~---------------------In~l~~~pdsgll~sa~ed~~I~~ 139 (248)
++ ++.|++|++||.++++.+..+..+ +... +++++|+|++.+|++|+.|+.|.+
T Consensus 194 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 273 (420)
T 3vl1_A 194 RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITV 273 (420)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEE
T ss_pred CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEE
Confidence 44 468999999999999999998741 2334 444555789999999999999999
Q ss_pred EEcCC
Q psy2083 140 YYIPS 144 (248)
Q Consensus 140 w~Ip~ 144 (248)
|++..
T Consensus 274 ~d~~~ 278 (420)
T 3vl1_A 274 HNVFS 278 (420)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 99865
No 63
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.68 E-value=2.7e-15 Score=129.39 Aligned_cols=126 Identities=10% Similarity=0.128 Sum_probs=107.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+++.+..+..| .+.|..++++|++..+++++.++ .|++||+++++++....+. .+|.+++|+|++
T Consensus 168 ~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg--------~i~~~d~~~~~~~~~~~~~--~~v~~~~~s~~~ 236 (337)
T 1gxr_A 168 WDLHNQTLVRQFQGH-TDGASCIDISNDGTKLWTGGLDN--------TVRSWDLREGRQLQQHDFT--SQIFSLGYCPTG 236 (337)
T ss_dssp EETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTTEEEEEEECS--SCEEEEEECTTS
T ss_pred EeCCCCceeeeeecc-cCceEEEEECCCCCEEEEEecCC--------cEEEEECCCCceEeeecCC--CceEEEEECCCC
Confidence 566778888888775 68899999999887787777764 8999999999988877665 789999999997
Q ss_pred ---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 ---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 ---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.++.|++||.++++.. .+.. |..+|++++|+|++.+|++++.|+.|++|+++.
T Consensus 237 ~~l~~~~~~~~i~~~~~~~~~~~-~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 296 (337)
T 1gxr_A 237 EWLAVGMESSNVEVLHVNKPDKY-QLHL-HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp SEEEEEETTSCEEEEETTSSCEE-EECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CEEEEEcCCCcEEEEECCCCCeE-EEcC-CccceeEEEECCCCCEEEEecCCCcEEEEECCC
Confidence 44567999999999988765 4555 589999999999999999999999999999875
No 64
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.68 E-value=5.7e-16 Score=135.79 Aligned_cols=124 Identities=11% Similarity=0.199 Sum_probs=99.2
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC--ceeEEecCCCCCCeeEEEEcCC--c-
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD--KPLRVKDHMYGLPIRDIKFHDN--Y- 85 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~--~pl~~~~h~~~~pI~sI~F~~d--~- 85 (248)
|+++..+.+| .+.|.+++|+|++..+++++.|+ +|+|||+..+ +++... ..|..+|++++|+++ +
T Consensus 1 G~~~~~~~~h-~~~v~~~~~s~~~~~l~~~~~dg--------~i~iw~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~ 70 (379)
T 3jrp_A 1 GSMVVIANAH-NELIHDAVLDYYGKRLATCSSDK--------TIKIFEVEGETHKLIDTL-TGHEGPVWRVDWAHPKFGT 70 (379)
T ss_dssp ----CCEEEC-CCCEEEEEECSSSSEEEEEETTS--------CEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCGGGCS
T ss_pred CCccEEecCC-cccEEEEEEcCCCCEEEEEECCC--------cEEEEecCCCcceeeeEe-cCCCCcEEEEEeCCCCCCC
Confidence 5666777776 79999999999888787777774 8999999854 444443 234589999999866 4
Q ss_pred -ee-eeCCCeEEEEECCCCC--EEEEeecCCCCCeeEEEEeCC--CCEEEEEeCCCeEEEEEcCCC
Q psy2083 86 -VL-SMDSSVVKIWSKDNGS--LFTCIESGDQTQFNNLCHIPE--SGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 86 -l~-Ssdd~~IKIWD~~tGk--~~~tie~~h~~~In~l~~~pd--sgll~sa~ed~~I~~w~Ip~l 145 (248)
++ ++.|+.|+|||.++++ .+..+.. |...|++++|+|+ +.+|++++.|+.|.+|++...
T Consensus 71 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 71 ILASCSYDGKVLIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred EEEEeccCCEEEEEEcCCCceeEeeeecC-CCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 44 4679999999999987 6777776 6899999999999 999999999999999998765
No 65
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.68 E-value=1.6e-15 Score=134.54 Aligned_cols=128 Identities=8% Similarity=0.043 Sum_probs=109.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
++..+++.+..+..+ ...|..++|+|++..+++++.++ .|++||+++++++.... .+..+|.++.|+|++
T Consensus 232 ~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d~--------~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~ 301 (425)
T 1r5m_A 232 YQITEKTPTGKLIGH-HGPISVLEFNDTNKLLLSASDDG--------TLRIWHGGNGNSQNCFY-GHSQSIVSASWVGDD 301 (425)
T ss_dssp EETTCSSCSEEECCC-SSCEEEEEEETTTTEEEEEETTS--------CEEEECSSSBSCSEEEC-CCSSCEEEEEEETTT
T ss_pred EEcCCCceeeeeccC-CCceEEEEECCCCCEEEEEcCCC--------EEEEEECCCCccceEec-CCCccEEEEEECCCC
Confidence 455667777787765 68999999999887777777664 89999999998877653 234899999999997
Q ss_pred --eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 --VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.|+.|++||.++++.+..+.. |..+|++++|+|++.+|++++.|+.|.+|++..
T Consensus 302 ~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 302 KVISCSMDGSVRLWSLKQNTLLALSIV-DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEEC-TTCCEEEEEECTTSSEEEEEETTSCEEEEECHH
T ss_pred EEEEEeCCCcEEEEECCCCcEeEeccc-CCccEEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 5556899999999999999999998 589999999999999999999999999999865
No 66
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.68 E-value=2.5e-16 Score=139.72 Aligned_cols=176 Identities=9% Similarity=0.097 Sum_probs=113.2
Q ss_pred chhcC--ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc---eeEEecCCCCCCeeEEEE
Q psy2083 7 RQDKG--SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK---PLRVKDHMYGLPIRDIKF 81 (248)
Q Consensus 7 ~~~~G--~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~---pl~~~~h~~~~pI~sI~F 81 (248)
|..++ +++.++.+| .+.|.+++|+|++..+++++.|+ +|++||+++++ +.... ..|..+|++++|
T Consensus 39 ~~~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~d~--------~v~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~ 108 (377)
T 3dwl_C 39 EQDGNGWKHARTFSDH-DKIVTCVDWAPKSNRIVTCSQDR--------NAYVYEKRPDGTWKQTLVL-LRLNRAATFVRW 108 (377)
T ss_dssp EEETTEEEECCCBCCC-SSCEEEEEECTTTCCEEEEETTS--------SEEEC------CCCCEEEC-CCCSSCEEEEEC
T ss_pred EccCCceEEEEEEecC-CceEEEEEEeCCCCEEEEEeCCC--------eEEEEEcCCCCceeeeeEe-cccCCceEEEEE
Confidence 34445 566666665 78999999999888888887775 99999999987 44443 234589999999
Q ss_pred cCCc---eeeeCCCeEEEEECCCCC---EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCC-----CC
Q psy2083 82 HDNY---VLSMDSSVVKIWSKDNGS---LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPA-----PK 150 (248)
Q Consensus 82 ~~d~---l~Ssdd~~IKIWD~~tGk---~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~a-----P~ 150 (248)
+|++ ++++.|+.|++||.++++ ....+...|...|++++|+|++.+|++++.|++|++|++...... ..
T Consensus 109 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 188 (377)
T 3dwl_C 109 SPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASV 188 (377)
T ss_dssp CTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCS
T ss_pred CCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccc
Confidence 9987 445689999999999987 367777535899999999999999999999999999998432111 11
Q ss_pred cccc--ccchhhhhhcc-cc---ccccCCceeecHhHHhhcCCccccC
Q psy2083 151 WCGF--LDNLTEELEEN-II---ENVYDDYKFVTRQELEDLGLGHLIG 192 (248)
Q Consensus 151 wcs~--ld~~tee~e~~-~~---~~~yd~y~fvt~~~l~~l~~~~lig 192 (248)
|... ...+..++.+. .. ..-.|+-.+++-.+...+.++++-.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~ 236 (377)
T 3dwl_C 189 WGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSA 236 (377)
T ss_dssp SCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECS
T ss_pred cccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 2211 12222223111 11 1123555677766666777766543
No 67
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.67 E-value=9.2e-16 Score=136.19 Aligned_cols=126 Identities=12% Similarity=0.183 Sum_probs=106.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|..+++++..+..+ ...|..++|+|++ .+++++.++ .|++||+++++++.... .+..+|.+++|+|++
T Consensus 274 ~d~~~~~~~~~~~~~-~~~i~~~~~~~~~-~l~~~~~d~--------~i~i~d~~~~~~~~~~~-~~~~~i~~~~~s~~~ 342 (425)
T 1r5m_A 274 WHGGNGNSQNCFYGH-SQSIVSASWVGDD-KVISCSMDG--------SVRLWSLKQNTLLALSI-VDGVPIFAGRISQDG 342 (425)
T ss_dssp ECSSSBSCSEEECCC-SSCEEEEEEETTT-EEEEEETTS--------EEEEEETTTTEEEEEEE-CTTCCEEEEEECTTS
T ss_pred EECCCCccceEecCC-CccEEEEEECCCC-EEEEEeCCC--------cEEEEECCCCcEeEecc-cCCccEEEEEEcCCC
Confidence 455677788888765 6899999999977 677776664 99999999998877653 234799999999997
Q ss_pred ---eeeeCCCeEEEEECCCCC--------------------EEEEeecCCCC--CeeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 86 ---VLSMDSSVVKIWSKDNGS--------------------LFTCIESGDQT--QFNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 86 ---l~Ssdd~~IKIWD~~tGk--------------------~~~tie~~h~~--~In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
++++.|+.|+|||.++++ ++..+.. |.. .|++++|+|++.+|++++.|+.|.+|
T Consensus 343 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 421 (425)
T 1r5m_A 343 QKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQS-SQDNDYIFDLSWNCAGNKISVAYSLQEGSVV 421 (425)
T ss_dssp SEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECC-TTCCCCEEEEEECTTSSEEEEEESSSCCEEE
T ss_pred CEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcC-cccCCceEEEEccCCCceEEEEecCceEEEE
Confidence 445679999999999988 8999988 455 99999999999999999999999999
Q ss_pred EcC
Q psy2083 141 YIP 143 (248)
Q Consensus 141 ~Ip 143 (248)
+++
T Consensus 422 ~~~ 424 (425)
T 1r5m_A 422 AIP 424 (425)
T ss_dssp ECC
T ss_pred eec
Confidence 986
No 68
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.67 E-value=3.8e-15 Score=128.44 Aligned_cols=123 Identities=11% Similarity=0.120 Sum_probs=103.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|..+++.+..+.. ...+..++|+|++..+++++.++ .|++||+++++......|. .+|.+++|+|++
T Consensus 210 ~d~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~~~--------~i~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~ 277 (337)
T 1gxr_A 210 WDLREGRQLQQHDF--TSQIFSLGYCPTGEWLAVGMESS--------NVEVLHVNKPDKYQLHLHE--SCVLSLKFAYCG 277 (337)
T ss_dssp EETTTTEEEEEEEC--SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTSSCEEEECCCS--SCEEEEEECTTS
T ss_pred EECCCCceEeeecC--CCceEEEEECCCCCEEEEEcCCC--------cEEEEECCCCCeEEEcCCc--cceeEEEECCCC
Confidence 56677888888765 47899999999887777776664 8999999998876655554 899999999997
Q ss_pred --e-eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 86 --V-LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 86 --l-~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+ +++.|+.|++||.++++.+..... ..+|++++|+|++.+|++++.|+.|.+|++
T Consensus 278 ~~l~~~~~dg~i~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 278 KWFVSTGKDNLLNAWRTPYGASIFQSKE--SSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEEC--SSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CEEEEecCCCcEEEEECCCCeEEEEecC--CCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 4 456899999999999998866554 789999999999999999999999999986
No 69
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.67 E-value=6.2e-16 Score=144.70 Aligned_cols=117 Identities=12% Similarity=0.129 Sum_probs=99.9
Q ss_pred EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcC----------Cc
Q psy2083 16 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHD----------NY 85 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~----------d~ 85 (248)
.+..| ...|.+++|+|++.++++++.|+ .|++||+++++++......|..+|++++|+| ++
T Consensus 483 ~~~~~-~~~v~~~~~s~~g~~l~~~~~dg--------~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~ 553 (615)
T 1pgu_A 483 LKTPL-RAKPSYISISPSETYIAAGDVMG--------KILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEE 553 (615)
T ss_dssp CSSCC-SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSC
T ss_pred ccCCc-cCceEEEEECCCCCEEEEcCCCC--------eEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCC
Confidence 33444 78999999999888888887775 8999999999888765422458999999999 76
Q ss_pred --ee-eeCCCeEEEEECCCC-CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 86 --VL-SMDSSVVKIWSKDNG-SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 --l~-Ssdd~~IKIWD~~tG-k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++ ++.|+.|+|||.+++ +++..+.+ |...|++++|+||+. |++++.|+.|++|++.
T Consensus 554 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 554 DLVATGSLDTNIFIYSVKRPMKIIKALNA-HKDGVNNLLWETPST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp CEEEEEETTSCEEEEESSCTTCCEEETTS-STTCEEEEEEEETTE-EEEEETTSCEEEEEEC
T ss_pred CEEEEEcCCCcEEEEECCCCceechhhhc-CccceEEEEEcCCCC-eEEecCCceEEEEeee
Confidence 44 457999999999998 78888888 699999999999999 9999999999999975
No 70
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.67 E-value=4.9e-15 Score=134.22 Aligned_cols=129 Identities=10% Similarity=0.132 Sum_probs=109.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+|+....+..+|.+.|.+++|+|++..+++++.++ .|++||+.+++++.... .|..+|.++.|+++.
T Consensus 118 w~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg--------~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~ 188 (401)
T 4aez_A 118 WNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNG--------LVDIYDVESQTKLRTMA-GHQARVGCLSWNRHV 188 (401)
T ss_dssp EETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCCEEEEEC-CCSSCEEEEEEETTE
T ss_pred eeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCC--------eEEEEECcCCeEEEEec-CCCCceEEEEECCCE
Confidence 456778888888876678999999999877777777664 99999999998877653 445899999998777
Q ss_pred -eeeeCCCeEEEEECC-CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VLSMDSSVVKIWSKD-NGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~Ssdd~~IKIWD~~-tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.|+.|++||.+ .+..+..+.+ |...|++++|+|++.+|++|+.|+.|++|++..
T Consensus 189 l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 248 (401)
T 4aez_A 189 LSSGSRSGAIHHHDVRIANHQIGTLQG-HSSEVCGLAWRSDGLQLASGGNDNVVQIWDARS 248 (401)
T ss_dssp EEEEETTSEEEEEETTSSSCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred EEEEcCCCCEEEEecccCcceeeEEcC-CCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCC
Confidence 555689999999999 5677888888 699999999999999999999999999999875
No 71
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.66 E-value=1e-15 Score=133.44 Aligned_cols=129 Identities=9% Similarity=0.129 Sum_probs=100.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeC---CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec----CCCCCCeeE
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIP---ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD----HMYGLPIRD 78 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~---~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~----h~~~~pI~s 78 (248)
+|..++++...... ...|.+++|+| ++..+++++.++ .|++||+++++++.... ..|..+|++
T Consensus 195 ~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~l~~~~~dg--------~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~ 264 (357)
T 3i2n_A 195 FDLRNMALRWETNI--KNGVCSLEFDRKDISMNKLVATSLEG--------KFHVFDMRTQHPTKGFASVSEKAHKSTVWQ 264 (357)
T ss_dssp EETTTTEEEEEEEC--SSCEEEEEESCSSSSCCEEEEEESTT--------EEEEEEEEEEETTTEEEEEEEECCSSCEEE
T ss_pred EECccCceeeecCC--CCceEEEEcCCCCCCCCEEEEECCCC--------eEEEEeCcCCCcccceeeeccCCCcCCEEE
Confidence 35556666544333 57899999999 777777777664 89999999986654321 234589999
Q ss_pred EEEcCCc---e-eeeCCCeEEEEECCCC-------------------CEEEEeecCCCCCeeEEEEeCCCCEEE-EEeCC
Q psy2083 79 IKFHDNY---V-LSMDSSVVKIWSKDNG-------------------SLFTCIESGDQTQFNNLCHIPESGMMF-IANEN 134 (248)
Q Consensus 79 I~F~~d~---l-~Ssdd~~IKIWD~~tG-------------------k~~~tie~~h~~~In~l~~~pdsgll~-sa~ed 134 (248)
++|+|++ + +++.|+.|+|||.+++ +.+.++.+ |..+|++++|+|++.+|+ +++.|
T Consensus 265 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~s~~~d 343 (357)
T 3i2n_A 265 VRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL-STQPISSLDWSPDKRGLCVCSSFD 343 (357)
T ss_dssp EEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC-CSSCEEEEEECSSSTTEEEEEETT
T ss_pred EEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecccc-CCCCeeEEEEcCCCCeEEEEecCC
Confidence 9999986 4 4468999999999864 35677777 689999999999999998 89999
Q ss_pred CeEEEEEcCCC
Q psy2083 135 KKILTYYIPSL 145 (248)
Q Consensus 135 ~~I~~w~Ip~l 145 (248)
+.|++|++..+
T Consensus 344 ~~i~iw~~~~~ 354 (357)
T 3i2n_A 344 QTVRVLIVTKL 354 (357)
T ss_dssp SEEEEEEECC-
T ss_pred CcEEEEECCCc
Confidence 99999998764
No 72
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.66 E-value=3.7e-15 Score=129.93 Aligned_cols=123 Identities=7% Similarity=0.125 Sum_probs=100.4
Q ss_pred eeEEEecCCCCCeeEEEEeCC----CCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cC---CCCCCeeEEEEcCC
Q psy2083 13 LFTCIESGDQTQFNNLCHIPE----SGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DH---MYGLPIRDIKFHDN 84 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~----~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h---~~~~pI~sI~F~~d 84 (248)
+...+..+|.+.|++++|+|+ ...++++++++ .|++||+.+++++... .| .+..+|.+++|+|+
T Consensus 9 ~~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~--------~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 80 (366)
T 3k26_A 9 CVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSN--------RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYD 80 (366)
T ss_dssp EEEEEECTTCSCEEEEEECTTCCTTSCEEEEEEETT--------EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEEC
T ss_pred EEEEeecCCCCceEEEEEecccCCCCceEEEECCCC--------EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccC
Confidence 334555566899999999984 44466666665 8999999988765443 22 24478999999998
Q ss_pred ----c---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCC
Q psy2083 85 ----Y---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 85 ----~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ ++++.|+.|+|||..+++.+..+.+ |..+|++++|+| ++.+|++|+.|+.|++|++..
T Consensus 81 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 81 SNTSHPLLAVAGSRGIIRIINPITMQCIKHYVG-HGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTTCCEEEEEEETTCEEEEECTTTCCEEEEEES-CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCCCCEEEEecCCCEEEEEEchhceEeeeecC-CCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 3 4456899999999999999999998 699999999999 999999999999999999865
No 73
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.66 E-value=1e-15 Score=133.38 Aligned_cols=130 Identities=10% Similarity=0.098 Sum_probs=100.3
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC---c--
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN---Y-- 85 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d---~-- 85 (248)
-+++..+..+|.+.|.+++|+|++..++++|+.++ .+|+|+|||+.+++.......+|..+|++++|+|+ +
T Consensus 7 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~----~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 82 (357)
T 3i2n_A 7 PQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFAR----GTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRY 82 (357)
T ss_dssp CCEEEEEEEECSSCEEEEEECTTSSEEEEEEC--C----CCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCC
T ss_pred hHHhhhhccCCCCceEEEEEcCCCceEEEecCccC----CCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCce
Confidence 34555544445799999999998877766664300 12499999999987654433334489999999998 4
Q ss_pred ee-eeCCCeEEEEECCCCC-EEEEeecCCCCCeeEEE------EeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 86 VL-SMDSSVVKIWSKDNGS-LFTCIESGDQTQFNNLC------HIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 86 l~-Ssdd~~IKIWD~~tGk-~~~tie~~h~~~In~l~------~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
++ ++.|+.|++||.++++ ++..+.+ |...|++++ |+|++.+|++++.|+.|.+|++..-
T Consensus 83 l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~ 149 (357)
T 3i2n_A 83 LATGDFGGNLHIWNLEAPEMPVYSVKG-HKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQK 149 (357)
T ss_dssp EEEEETTSCEEEECTTSCSSCSEEECC-CSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSC
T ss_pred EEEecCCCeEEEEeCCCCCccEEEEEe-cccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCC
Confidence 44 4679999999999998 8889988 699999995 5789999999999999999998763
No 74
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.66 E-value=2.6e-15 Score=146.22 Aligned_cols=122 Identities=8% Similarity=0.181 Sum_probs=105.4
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLS 88 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~S 88 (248)
++.+.+.+| ++.|.+++|+|++..+++++.++ +|+|||+++++++.... .|..+|++++|+|++ +++
T Consensus 4 ~~~~~~~~h-~~~v~~i~~sp~~~~la~~~~~g--------~v~iwd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~ 73 (814)
T 3mkq_A 4 DIKKTFSNR-SDRVKGIDFHPTEPWVLTTLYSG--------RVEIWNYETQVEVRSIQ-VTETPVRAGKFIARKNWIIVG 73 (814)
T ss_dssp CCEEEEEEE-CSCEEEEEECSSSSEEEEEETTS--------EEEEEETTTTEEEEEEE-CCSSCEEEEEEEGGGTEEEEE
T ss_pred ccceeeecC-CCceEEEEECCCCCEEEEEeCCC--------EEEEEECCCCceEEEEe-cCCCcEEEEEEeCCCCEEEEE
Confidence 345666765 78999999999888788877664 99999999998877654 344899999999998 445
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++|+.|+|||..+|+.+.++.+ |...|++++|+|++..|++++.|++|.+|++..
T Consensus 74 ~~dg~i~vw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~ 128 (814)
T 3mkq_A 74 SDDFRIRVFNYNTGEKVVDFEA-HPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN 128 (814)
T ss_dssp ETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSSEEEEEETTSEEEEEEGGG
T ss_pred eCCCeEEEEECCCCcEEEEEec-CCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCC
Confidence 6899999999999999999998 699999999999999999999999999999864
No 75
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.66 E-value=3.2e-15 Score=135.00 Aligned_cols=125 Identities=8% Similarity=0.152 Sum_probs=103.2
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCC-cEEEeecCceeeeecCCeeEEEEcCCCceeEEec-CCCCCCeeEEEEcCCc--e-
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-HMYGLPIRDIKFHDNY--V- 86 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g-~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~~~pI~sI~F~~d~--l- 86 (248)
+.+..+.+| .+.|..++|+|++. .+++++.|+ +|++||+++++++.... ..|..+|.+++|+|++ +
T Consensus 122 ~~~~~~~~h-~~~v~~~~~~p~~~~~l~s~~~dg--------~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 192 (402)
T 2aq5_A 122 EPVITLEGH-TKRVGIVAWHPTAQNVLLSAGCDN--------VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALIC 192 (402)
T ss_dssp SCSEEEECC-SSCEEEEEECSSBTTEEEEEETTS--------CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEE
T ss_pred CceEEecCC-CCeEEEEEECcCCCCEEEEEcCCC--------EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEE
Confidence 566777766 68999999999875 466666664 99999999998887763 4456899999999987 4
Q ss_pred eeeCCCeEEEEECCCCCEEEEe-ecCCCCC-eeEEEEeCCCCEEEEE---eCCCeEEEEEcCCCC
Q psy2083 87 LSMDSSVVKIWSKDNGSLFTCI-ESGDQTQ-FNNLCHIPESGMMFIA---NENKKILTYYIPSLG 146 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~tGk~~~ti-e~~h~~~-In~l~~~pdsgll~sa---~ed~~I~~w~Ip~lG 146 (248)
+++.|+.|+|||.++++.+..+ .+ |... +.+++|+|++.+|++| +.|++|.+|++....
T Consensus 193 ~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 193 TSCRDKRVRVIEPRKGTVVAEKDRP-HEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECS-SCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred EEecCCcEEEEeCCCCceeeeeccC-CCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 4568999999999999999998 55 4554 8999999999999999 799999999987643
No 76
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.65 E-value=7.1e-15 Score=131.16 Aligned_cols=168 Identities=8% Similarity=0.081 Sum_probs=118.8
Q ss_pred cchhcCceeEEEec-CCCCCeeEEEEeCC-CCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEc
Q psy2083 6 LRQDKGSLFTCIES-GDQTQFNNLCHIPE-SGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFH 82 (248)
Q Consensus 6 ~~~~~G~~~~~~~~-~~~~~V~~~~~~~~-~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~ 82 (248)
.|..+++....+.. +|.+.|.+++|+|+ +..+++++.|+ +|++||+++....... .+.+..+|.+++|+
T Consensus 101 wd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~--------~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 172 (383)
T 3ei3_B 101 WDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG--------ATTLRDFSGSVIQVFAKTDSWDYWYCCVDVS 172 (383)
T ss_dssp EETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT--------EEEEEETTSCEEEEEECCCCSSCCEEEEEEE
T ss_pred EeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC--------EEEEEECCCCceEEEeccCCCCCCeEEEEEC
Confidence 34556666666652 45799999999994 45566666664 9999999974332222 23445789999999
Q ss_pred CCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC-EEEEEeCCCeEEEEEcCCCCCCCCccccccch
Q psy2083 83 DNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPSLGPAPKWCGFLDNL 158 (248)
Q Consensus 83 ~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg-ll~sa~ed~~I~~w~Ip~lG~aP~wcs~ld~~ 158 (248)
|++ ++++.|+.|++||. +++++.++.. |...|++++|+|++. +|++|+.|+.|++|++......... +..+
T Consensus 173 ~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~---~~~~ 247 (383)
T 3ei3_B 173 VSRQMLATGDSTGRLLLLGL-DGHEIFKEKL-HKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSY---IAEM 247 (383)
T ss_dssp TTTTEEEEEETTSEEEEEET-TSCEEEEEEC-SSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCE---EEEE
T ss_pred CCCCEEEEECCCCCEEEEEC-CCCEEEEecc-CCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccce---EEEe
Confidence 997 44568999999999 5889999998 699999999999998 9999999999999999875433211 1111
Q ss_pred hhhhhcc-ccccc---c-CCceeecHhHHhhcCCccc
Q psy2083 159 TEELEEN-IIENV---Y-DDYKFVTRQELEDLGLGHL 190 (248)
Q Consensus 159 tee~e~~-~~~~~---y-d~y~fvt~~~l~~l~~~~l 190 (248)
++. ....+ - |+..+++-.....+.++.+
T Consensus 248 ----~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~ 280 (383)
T 3ei3_B 248 ----PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSS 280 (383)
T ss_dssp ----ECSSCEEEEEECTTTSCEEEEEESSSEEEEEET
T ss_pred ----cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEEC
Confidence 111 11111 2 5566777666566666553
No 77
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.65 E-value=4.7e-15 Score=134.59 Aligned_cols=127 Identities=11% Similarity=0.207 Sum_probs=97.2
Q ss_pred hhcCceeEEEecCCCCCeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCC---Cc---eeEEecCCCCCCeeEEE
Q psy2083 8 QDKGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRA---DK---PLRVKDHMYGLPIRDIK 80 (248)
Q Consensus 8 ~~~G~~~~~~~~~~~~~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs---~~---pl~~~~h~~~~pI~sI~ 80 (248)
..+|+++..+..+|.+.|++++|+| ++..+++++.|+ +|+|||+.+ +. +.....|. .+|++|+
T Consensus 49 ~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg--------~v~vwd~~~~~~~~~~~~~~~~~h~--~~v~~~~ 118 (437)
T 3gre_A 49 NLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQG--------VIKIWNLKEIIVGEVYSSSLTYDCS--STVTQIT 118 (437)
T ss_dssp GCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTS--------EEEEEEHHHHHTTCCCSCSEEEECS--SCEEEEE
T ss_pred cccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCc--------eEEEeECcccccCcccceeeeccCC--CCEEEEE
Confidence 4578999999555589999999999 777787877774 999999987 43 34444444 8899999
Q ss_pred EcCCc--ee-eeCCCeEEEEEC----------------------------------------------------------
Q psy2083 81 FHDNY--VL-SMDSSVVKIWSK---------------------------------------------------------- 99 (248)
Q Consensus 81 F~~d~--l~-Ssdd~~IKIWD~---------------------------------------------------------- 99 (248)
|+|++ ++ ++.|++|+|||.
T Consensus 119 ~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd 198 (437)
T 3gre_A 119 MIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFD 198 (437)
T ss_dssp ECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEE
T ss_pred EeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence 99865 33 345555555554
Q ss_pred -CCCCEEEEeecC-CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 100 -DNGSLFTCIESG-DQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 100 -~tGk~~~tie~~-h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++++.++... |...|++++|+|++.+|++|+.|++|++|++..
T Consensus 199 ~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 245 (437)
T 3gre_A 199 IRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF 245 (437)
T ss_dssp TTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred CCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC
Confidence 455666666642 468999999999999999999999999999875
No 78
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.64 E-value=4.9e-15 Score=151.55 Aligned_cols=128 Identities=9% Similarity=0.185 Sum_probs=111.1
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+|+.+.++.+| .+.|.+++|+|++..+++++.|+ +|++||+++++++.... +|..+|.++.|+|+.
T Consensus 642 w~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~~~d~--------~v~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~ 711 (1249)
T 3sfz_A 642 FKAETGEKLLDIKAH-EDEVLCCAFSSDDSYIATCSADK--------KVKIWDSATGKLVHTYD-EHSEQVNCCHFTNKS 711 (1249)
T ss_dssp EETTTCCEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTCCEEEEEE-CCSSCEEEEEECSSS
T ss_pred EECCCCCEEEEeccC-CCCEEEEEEecCCCEEEEEeCCC--------eEEEEECCCCceEEEEc-CCCCcEEEEEEecCC
Confidence 456788888898876 78999999999888888887775 99999999999887753 345899999999953
Q ss_pred ----e-eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 ----V-LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 ----l-~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ +++.|+.|++||.++|+++.++.+ |..+|++++|+|++.+|++++.|++|++|++..
T Consensus 712 ~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~-h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~ 774 (1249)
T 3sfz_A 712 NHLLLATGSNDFFLKLWDLNQKECRNTMFG-HTNSVNHCRFSPDDELLASCSADGTLRLWDVRS 774 (1249)
T ss_dssp SCCEEEEEETTSCEEEEETTSSSEEEEECC-CSSCEEEEEECSSTTEEEEEESSSEEEEEEGGG
T ss_pred CceEEEEEeCCCeEEEEECCCcchhheecC-CCCCEEEEEEecCCCEEEEEECCCeEEEEeCCC
Confidence 4 446899999999999999999998 699999999999999999999999999999754
No 79
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.64 E-value=9.5e-16 Score=136.03 Aligned_cols=124 Identities=6% Similarity=0.033 Sum_probs=95.2
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce---eEEecCCCCCCeeEEEEcCCc--ee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP---LRVKDHMYGLPIRDIKFHDNY--VL 87 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p---l~~~~h~~~~pI~sI~F~~d~--l~ 87 (248)
....+.+| ...|.+++|+|++..+++++.|+ +|++||++++++ +......|..+|++++|+|++ ++
T Consensus 92 ~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~--------~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 162 (377)
T 3dwl_C 92 QTLVLLRL-NRAATFVRWSPNEDKFAVGSGAR--------VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLA 162 (377)
T ss_dssp CEEECCCC-SSCEEEEECCTTSSCCEEEESSS--------CEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEE
T ss_pred eeeEeccc-CCceEEEEECCCCCEEEEEecCC--------eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEE
Confidence 44555554 68999999999888888887775 899999999864 444432255899999999997 44
Q ss_pred -eeCCCeEEEEECC------------------CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCC
Q psy2083 88 -SMDSSVVKIWSKD------------------NGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 88 -Ssdd~~IKIWD~~------------------tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~ 147 (248)
++.|+.|++||.+ +++++..+ + |...|++++|+|++.+|++++.|++|++|++..-..
T Consensus 163 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 163 AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-P-SGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-C-CSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-c-CCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 5689999999985 35667777 5 689999999999999999999999999999876433
No 80
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.64 E-value=1.5e-15 Score=134.06 Aligned_cols=163 Identities=8% Similarity=0.163 Sum_probs=110.5
Q ss_pred eeEEEecCCCCCeeEEEEeCCC-C-cEEEeecCceeeeecCCeeEEEEcCCCcee--EEecCCCCCCeeEEEEcCC----
Q psy2083 13 LFTCIESGDQTQFNNLCHIPES-G-MMFIANENKKILTYYIPAFYLYDIRADKPL--RVKDHMYGLPIRDIKFHDN---- 84 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~-g-~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl--~~~~h~~~~pI~sI~F~~d---- 84 (248)
....+.+| .+.|++++|+|++ | .+++++.| |+|++||++.+... ......|..+|+++.|+|+
T Consensus 95 ~~~~~~~h-~~~V~~v~~~p~~~g~~lasgs~D--------~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 165 (316)
T 3bg1_A 95 KSHEHAGH-DSSVNSVCWAPHDYGLILACGSSD--------GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPG 165 (316)
T ss_dssp EEEEECCC-SSCCCEEEECCTTTCSCEEEECSS--------SCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-
T ss_pred EEEEccCC-CCceEEEEECCCCCCcEEEEEcCC--------CCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCc
Confidence 44555554 7899999999973 4 45555555 49999999987432 2222345589999999986
Q ss_pred --------------c-ee-eeCCCeEEEEECCCC---CEEEEeecCCCCCeeEEEEeCCC----CEEEEEeCCCeEEEEE
Q psy2083 85 --------------Y-VL-SMDSSVVKIWSKDNG---SLFTCIESGDQTQFNNLCHIPES----GMMFIANENKKILTYY 141 (248)
Q Consensus 85 --------------~-l~-Ssdd~~IKIWD~~tG---k~~~tie~~h~~~In~l~~~pds----gll~sa~ed~~I~~w~ 141 (248)
. ++ ++.|++|||||.+++ +++.++.+ |...|++++|+|++ .+|++|+.|++|++|+
T Consensus 166 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~-h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 166 SLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEA-HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp -----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBC-CSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred cccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeeccc-CCCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence 2 44 468999999999865 46677887 69999999999987 7899999999999999
Q ss_pred cCCCCCCCCcccc-ccchhhhhhcc--ccccccCCceeecHhHHhhcCCccc
Q psy2083 142 IPSLGPAPKWCGF-LDNLTEELEEN--IIENVYDDYKFVTRQELEDLGLGHL 190 (248)
Q Consensus 142 Ip~lG~aP~wcs~-ld~~tee~e~~--~~~~~yd~y~fvt~~~l~~l~~~~l 190 (248)
+..... ..|+.. +.. .+.. ....-.|+..++|-.+...+.+|.+
T Consensus 245 ~~~~~~-~~~~~~~~~~----~~~~v~~v~~sp~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 245 CDDASS-NTWSPKLLHK----FNDVVWHVSWSITANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp CSSTTC-CCCBCCEEEE----CSSCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred ccCccc-cchhhhhhhc----CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence 865321 223321 211 1110 0111134556666666666666653
No 81
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.64 E-value=8.2e-15 Score=128.62 Aligned_cols=128 Identities=11% Similarity=0.094 Sum_probs=102.3
Q ss_pred chhcCc--eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcC
Q psy2083 7 RQDKGS--LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHD 83 (248)
Q Consensus 7 ~~~~G~--~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~ 83 (248)
|..+++ .+..+.+| .+.|.+++|+|++..+++++.|+ +|++||+++++..... ...+..+|++++|+|
T Consensus 36 ~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~~~~~dg--------~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 106 (372)
T 1k8k_C 36 EKSGNKWVQVHELKEH-NGQVTGVDWAPDSNRIVTCGTDR--------NAYVWTLKGRTWKPTLVILRINRAARCVRWAP 106 (372)
T ss_dssp EEETTEEEEEEEEECC-SSCEEEEEEETTTTEEEEEETTS--------CEEEEEEETTEEEEEEECCCCSSCEEEEEECT
T ss_pred eCCCCcEEeeeeecCC-CCcccEEEEeCCCCEEEEEcCCC--------eEEEEECCCCeeeeeEEeecCCCceeEEEECC
Confidence 445565 77777765 68999999999887787777764 8999999998654332 234458999999999
Q ss_pred Cc--e-eeeCCCeEEEEECCCCCE---EEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 84 NY--V-LSMDSSVVKIWSKDNGSL---FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 84 d~--l-~Ssdd~~IKIWD~~tGk~---~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++ + +++.++.|++||.++++. ...+...|...|++++|+|++.+|++++.|+.|.+|++.
T Consensus 107 ~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 107 NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 97 4 456799999999998873 444433368899999999999999999999999999974
No 82
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.64 E-value=8.6e-15 Score=127.43 Aligned_cols=86 Identities=16% Similarity=0.415 Sum_probs=68.5
Q ss_pred Ccee-EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEE--cCCc--
Q psy2083 11 GSLF-TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKF--HDNY-- 85 (248)
Q Consensus 11 G~~~-~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F--~~d~-- 85 (248)
+..+ ..+.+| .+.|.+++|+|++..+++++.|+ +|++||+++++++....|. .+|++++| ++++
T Consensus 75 ~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~dg--------~v~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~ 143 (368)
T 3mmy_A 75 GQTIPKAQQMH-TGPVLDVCWSDDGSKVFTASCDK--------TAKMWDLSSNQAIQIAQHD--APVKTIHWIKAPNYSC 143 (368)
T ss_dssp SCEEEEEEEEC-SSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTTEEEEEEECS--SCEEEEEEEECSSCEE
T ss_pred CceeEEEeccc-cCCEEEEEECcCCCEEEEEcCCC--------cEEEEEcCCCCceeecccc--CceEEEEEEeCCCCCE
Confidence 5555 555655 78999999999887788877774 9999999999888777665 89999999 7776
Q ss_pred ee-eeCCCeEEEEECCCCCEEEE
Q psy2083 86 VL-SMDSSVVKIWSKDNGSLFTC 107 (248)
Q Consensus 86 l~-Ssdd~~IKIWD~~tGk~~~t 107 (248)
++ ++.|+.|++||.++++++..
T Consensus 144 l~~~~~dg~i~vwd~~~~~~~~~ 166 (368)
T 3mmy_A 144 VMTGSWDKTLKFWDTRSSNPMMV 166 (368)
T ss_dssp EEEEETTSEEEEECSSCSSCSEE
T ss_pred EEEccCCCcEEEEECCCCcEEEE
Confidence 44 46799999999988765433
No 83
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.63 E-value=1.3e-14 Score=131.44 Aligned_cols=163 Identities=10% Similarity=0.159 Sum_probs=119.7
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---e
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---V 86 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l 86 (248)
.+.....+.+| .+.|.+++|+|++..+++++.|+ +|++||+++++++.... .+..+|++++|+|++ +
T Consensus 206 ~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d~--------~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~p~~~~ll 275 (401)
T 4aez_A 206 ANHQIGTLQGH-SSEVCGLAWRSDGLQLASGGNDN--------VVQIWDARSSIPKFTKT-NHNAAVKAVAWCPWQSNLL 275 (401)
T ss_dssp SSCEEEEEECC-SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTCSSEEEEEC-CCSSCCCEEEECTTSTTEE
T ss_pred CcceeeEEcCC-CCCeeEEEEcCCCCEEEEEeCCC--------eEEEccCCCCCccEEec-CCcceEEEEEECCCCCCEE
Confidence 35566667665 78999999999877777777775 99999999998887653 234899999999975 4
Q ss_pred eee---CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe--CCCeEEEEEcCCCCCCCCccccccchhhh
Q psy2083 87 LSM---DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN--ENKKILTYYIPSLGPAPKWCGFLDNLTEE 161 (248)
Q Consensus 87 ~Ss---dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~--ed~~I~~w~Ip~lG~aP~wcs~ld~~tee 161 (248)
+++ .|+.|++||..+++++.++.. ...|++++|+|++..|++++ .|+.|.+|+++.-...+.+ +
T Consensus 276 ~~~~gs~d~~i~i~d~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~---------~ 344 (401)
T 4aez_A 276 ATGGGTMDKQIHFWNAATGARVNTVDA--GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQV---------D 344 (401)
T ss_dssp EEECCTTTCEEEEEETTTCCEEEEEEC--SSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEE---------E
T ss_pred EEecCCCCCEEEEEECCCCCEEEEEeC--CCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEE---------E
Confidence 443 599999999999999999986 78999999999999999954 8999999998762211110 1
Q ss_pred hhccc-----cccccCCceeecHhHHhhcCCccccCC
Q psy2083 162 LEENI-----IENVYDDYKFVTRQELEDLGLGHLIGT 193 (248)
Q Consensus 162 ~e~~~-----~~~~yd~y~fvt~~~l~~l~~~~ligt 193 (248)
+..+. ...-.|+-.++|-.....+.+|++-..
T Consensus 345 ~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 345 IPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp EECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-
T ss_pred ecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 11111 112234555666666667777765544
No 84
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.63 E-value=4.3e-15 Score=132.11 Aligned_cols=116 Identities=11% Similarity=0.131 Sum_probs=96.6
Q ss_pred CCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC--CC---CCCeeEEEEcCCc--ee-eeCC-
Q psy2083 21 DQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH--MY---GLPIRDIKFHDNY--VL-SMDS- 91 (248)
Q Consensus 21 ~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h--~~---~~pI~sI~F~~d~--l~-Ssdd- 91 (248)
|...|.+++|+|++ .+++++.+ |.|++||+++++++..... .| ..+|++++|+|++ ++ ++.|
T Consensus 185 ~~~~i~~~~~~~~~-~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~ 255 (397)
T 1sq9_A 185 PSQFATSVDISERG-LIATGFNN--------GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN 255 (397)
T ss_dssp SCCCCCEEEECTTS-EEEEECTT--------SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET
T ss_pred CCCCceEEEECCCc-eEEEEeCC--------CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC
Confidence 46889999999987 66666555 4999999999988876531 13 5899999999987 44 4567
Q ss_pred --CeEEEEECCCCCEEEEeecC------------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 92 --SVVKIWSKDNGSLFTCIESG------------DQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 92 --~~IKIWD~~tGk~~~tie~~------------h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
+.|++||.++++++..+... |...|++++|+|++.+|++++.|++|.+|++...
T Consensus 256 ~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 256 SFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp TEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred CCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 89999999999999999861 3889999999999999999999999999998763
No 85
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.63 E-value=3.8e-15 Score=134.56 Aligned_cols=123 Identities=15% Similarity=0.305 Sum_probs=97.5
Q ss_pred eeEEEecCCC------------CCeeEEEEeCCC--CcEEEeecCceeeeecCCeeEEEEcCCCcee-------------
Q psy2083 13 LFTCIESGDQ------------TQFNNLCHIPES--GMMFIANENKKILTYYIPAFYLYDIRADKPL------------- 65 (248)
Q Consensus 13 ~~~~~~~~~~------------~~V~~~~~~~~~--g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl------------- 65 (248)
+...+.+| . +.|++++|+|++ ..+++++.|+ +|++||++++...
T Consensus 73 ~~~~~~~h-~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~--------~i~iw~~~~~~~~~~~~~~~~~~g~~ 143 (447)
T 3dw8_B 73 VYSTFQSH-EPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDK--------TIKLWKISERDKRPEGYNLKEEDGRY 143 (447)
T ss_dssp EEEEEECC-CCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSS--------CEEEEEEEEEEEEEECCSCC------
T ss_pred Eecccccc-cccccccccccccCceEEEEEcCCCCcceEEEeCCCC--------eEEEEecccccCCcceecccCccccc
Confidence 46667765 5 779999999987 5677777664 9999999874331
Q ss_pred --------------------------EEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCC-CCEEEE-------ee
Q psy2083 66 --------------------------RVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDN-GSLFTC-------IE 109 (248)
Q Consensus 66 --------------------------~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~t-Gk~~~t-------ie 109 (248)
.....+|..+|++++|+|++ +++++|+.|+|||.++ ++.+.. +.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 223 (447)
T 3dw8_B 144 RDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANME 223 (447)
T ss_dssp --CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGG
T ss_pred cCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeeccccccc
Confidence 12234556899999999997 6667999999999994 555553 34
Q ss_pred cCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCC
Q psy2083 110 SGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 110 ~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~l 145 (248)
+ |...|++++|+|++ .+|++|+.|++|++|++..-
T Consensus 224 ~-~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 259 (447)
T 3dw8_B 224 E-LTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRAS 259 (447)
T ss_dssp G-CCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTC
T ss_pred c-cCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCC
Confidence 5 68899999999999 99999999999999998763
No 86
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.63 E-value=1.4e-14 Score=127.21 Aligned_cols=129 Identities=7% Similarity=0.046 Sum_probs=102.6
Q ss_pred chhcCceeEEEe-cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce---eEEecCCCCCCeeEEEEc
Q psy2083 7 RQDKGSLFTCIE-SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP---LRVKDHMYGLPIRDIKFH 82 (248)
Q Consensus 7 ~~~~G~~~~~~~-~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p---l~~~~h~~~~pI~sI~F~ 82 (248)
|..+++....+. ..|...|.+++|+|++..+++++.++ .|++||++.+.+ .......|..+|++++|+
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~ 151 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSR--------VISICYFEQENDWWVCKHIKKPIRSTVLSLDWH 151 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTS--------SEEEEEEETTTTEEEEEEECTTCCSCEEEEEEC
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCC--------EEEEEEecCCCcceeeeeeecccCCCeeEEEEc
Confidence 444555444432 33468899999999887787777764 899999999864 233334456899999999
Q ss_pred CCc--ee-eeCCCeEEEEEC------------------CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 83 DNY--VL-SMDSSVVKIWSK------------------DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 83 ~d~--l~-Ssdd~~IKIWD~------------------~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
|++ ++ ++.|+.|++||. .+++++..+.+ |...|++++|+|++.+|++++.|+.|.+|+
T Consensus 152 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 230 (372)
T 1k8k_C 152 PNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS-SCGWVHGVCFSANGSRVAWVSHDSTVCLAD 230 (372)
T ss_dssp TTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC-CSSCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred CCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCC-CCCeEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 987 44 467999999994 47899999987 689999999999999999999999999999
Q ss_pred cCC
Q psy2083 142 IPS 144 (248)
Q Consensus 142 Ip~ 144 (248)
+..
T Consensus 231 ~~~ 233 (372)
T 1k8k_C 231 ADK 233 (372)
T ss_dssp GGG
T ss_pred CCC
Confidence 864
No 87
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.63 E-value=1.7e-14 Score=128.75 Aligned_cols=125 Identities=11% Similarity=0.095 Sum_probs=100.8
Q ss_pred hcCceeEEEecCCCCCeeEEEEeCCC-CcEEEeecCceeeeecCCeeEEEEcCCCceeEEec-CCCCCCeeEEEEcC-Cc
Q psy2083 9 DKGSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-HMYGLPIRDIKFHD-NY 85 (248)
Q Consensus 9 ~~G~~~~~~~~~~~~~V~~~~~~~~~-g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~~~pI~sI~F~~-d~ 85 (248)
.+.+....+.+| .+.|++++|+|++ .++++++.|+ +|+|||+.+++...... ++|..+|.+++|+| ++
T Consensus 61 ~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~~dg--------~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 131 (383)
T 3ei3_B 61 KSYKLHRTASPF-DRRVTSLEWHPTHPTTVAVGSKGG--------DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNT 131 (383)
T ss_dssp TTCEEEEEECCC-SSCEEEEEECSSCTTEEEEEEBTS--------CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEE
T ss_pred cccceEEeccCC-CCCEEEEEECCCCCCEEEEEcCCC--------eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCC
Confidence 456677777776 7999999999987 5677776664 99999999987766543 35568999999999 44
Q ss_pred --e-eeeCCCeEEEEECCCCCEEEEeecC--CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 86 --V-LSMDSSVVKIWSKDNGSLFTCIESG--DQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 --l-~Ssdd~~IKIWD~~tGk~~~tie~~--h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+ +++.|+.|+|||.++ +.+..+..+ |...|++++|+|++.+|++|+.|+.|.+|++.
T Consensus 132 ~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 193 (383)
T 3ei3_B 132 NQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD 193 (383)
T ss_dssp EEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT
T ss_pred CEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC
Confidence 4 456899999999994 666777652 23779999999999999999999999999983
No 88
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.63 E-value=1.6e-14 Score=132.16 Aligned_cols=124 Identities=13% Similarity=0.180 Sum_probs=101.2
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD 90 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd 90 (248)
...++.+| .+.|+++..+ +++.+++++.|+ +|++||+++++++.... +|..+|++++|++++ ++++.
T Consensus 113 ~~~~l~~h-~~~v~~~~~~-~~~~l~sgs~dg--------~i~vwd~~~~~~~~~~~-~h~~~V~~l~~~~~~~l~s~s~ 181 (464)
T 3v7d_B 113 QRTTLRGH-MTSVITCLQF-EDNYVITGADDK--------MIRVYDSINKKFLLQLS-GHDGGVWALKYAHGGILVSGST 181 (464)
T ss_dssp EEEEEECC-SSSCEEEEEE-ETTEEEEEETTS--------CEEEEETTTTEEEEEEC-CCSSCEEEEEECSTTEEEEEET
T ss_pred ceEEEcCC-CCCcEEEEEE-CCCEEEEEcCCC--------cEEEEECCCCcEEEEEe-CCCcCEEEEEEcCCCEEEEEeC
Confidence 45567776 5666554444 456777777774 99999999999887763 445899999999987 55568
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEe--CCCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHI--PESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~--pdsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
|++|++||.++|+.+..+.+ |..+|++++|+ |++.+|++|+.|++|++|+++.....
T Consensus 182 dg~i~vwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~ 240 (464)
T 3v7d_B 182 DRTVRVWDIKKGCCTHVFEG-HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSV 240 (464)
T ss_dssp TSCEEEEETTTTEEEEEECC-CSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC
T ss_pred CCCEEEEECCCCcEEEEECC-CCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccc
Confidence 99999999999999999998 69999999998 58899999999999999999875443
No 89
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.63 E-value=3.9e-15 Score=136.77 Aligned_cols=118 Identities=9% Similarity=0.128 Sum_probs=93.8
Q ss_pred CCCCCeeEEEEeCCCC-cEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc--eee-eCCCeE
Q psy2083 20 GDQTQFNNLCHIPESG-MMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY--VLS-MDSSVV 94 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g-~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~--l~S-sdd~~I 94 (248)
+|.+.|++++|+|.++ .++++|.|+ +|+|||++++...... .|....++.+++|++++ +++ +.|+.|
T Consensus 162 gH~~~V~~l~f~p~~~~~l~s~s~D~--------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i 233 (435)
T 4e54_B 162 GAGGSITGLKFNPLNTNQFYASSMEG--------TTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNV 233 (435)
T ss_dssp SSSCCCCEEEECSSCTTEEEEECSSS--------CEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCC--------EEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcE
Confidence 3478999999998554 566666664 9999999987543333 44545678999999997 444 579999
Q ss_pred EEEECCCCCEEEEeecCCCCCeeEEEEeCCCC-EEEEEeCCCeEEEEEcCCCCC
Q psy2083 95 KIWSKDNGSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 95 KIWD~~tGk~~~tie~~h~~~In~l~~~pdsg-ll~sa~ed~~I~~w~Ip~lG~ 147 (248)
++||.+ |+.+.++.+ |..+|++++|+|++. +|++|+.|+.|++|++.....
T Consensus 234 ~~wd~~-~~~~~~~~~-h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~ 285 (435)
T 4e54_B 234 ILLNMD-GKELWNLRM-HKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRG 285 (435)
T ss_dssp EEEESS-SCBCCCSBC-CSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCS
T ss_pred eeeccC-cceeEEEec-ccceEEeeeecCCCceEEEEecCcceeeEEecccccc
Confidence 999987 677778888 699999999999985 788999999999999876543
No 90
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.62 E-value=2.2e-14 Score=122.62 Aligned_cols=122 Identities=12% Similarity=0.230 Sum_probs=99.7
Q ss_pred cCceeEEEecCCCCCeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V 86 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l 86 (248)
.++....+..+ ...|.+++++| ++..+++++.++ .|++||. ++++......+..+|++++|+|++ +
T Consensus 131 ~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d~--------~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~~~ 199 (313)
T 3odt_A 131 EGSLVYNLQAH-NASVWDAKVVSFSENKFLTASADK--------TIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGHFI 199 (313)
T ss_dssp TTEEEEEEECC-SSCEEEEEEEETTTTEEEEEETTS--------CEEEEET--TEEEEEECSSCSSCEEEEEEEETTEEE
T ss_pred CCcEEEecccC-CCceeEEEEccCCCCEEEEEECCC--------CEEEEec--CceEEEEeccCcccEEEEEEcCCCeEE
Confidence 45566666665 68999999998 555566666664 9999994 445555543355899999999998 5
Q ss_pred eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 87 LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 87 ~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+++.++.|++||.++++++..+.+ |..+|++++|+|++ .|++++.|+.|.+|++..
T Consensus 200 ~~~~dg~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~ 255 (313)
T 3odt_A 200 SCSNDGLIKLVDMHTGDVLRTYEG-HESFVYCIKLLPNG-DIVSCGEDRTVRIWSKEN 255 (313)
T ss_dssp EEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTS-CEEEEETTSEEEEECTTT
T ss_pred EccCCCeEEEEECCchhhhhhhhc-CCceEEEEEEecCC-CEEEEecCCEEEEEECCC
Confidence 567899999999999999999998 68999999999999 689999999999999865
No 91
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.62 E-value=1.4e-14 Score=126.79 Aligned_cols=128 Identities=9% Similarity=0.245 Sum_probs=99.2
Q ss_pred chhcCc--eeEEEecCCCCCeeEEEEeCC--CCcEEEeecCceeeeecCCeeEEEEcCCCceeE-EecCCCCCCeeEEEE
Q psy2083 7 RQDKGS--LFTCIESGDQTQFNNLCHIPE--SGMMFIANENKKILTYYIPAFYLYDIRADKPLR-VKDHMYGLPIRDIKF 81 (248)
Q Consensus 7 ~~~~G~--~~~~~~~~~~~~V~~~~~~~~--~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~-~~~h~~~~pI~sI~F 81 (248)
|..+++ .+..+..| ...|.+++|+|+ +..+++++.|+ +|++||++++.... .....|..+|++++|
T Consensus 85 d~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~d~--------~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~ 155 (379)
T 3jrp_A 85 KEENGRWSQIAVHAVH-SASVNSVQWAPHEYGPLLLVASSDG--------KVSVVEFKENGTTSPIIIDAHAIGVNSASW 155 (379)
T ss_dssp EEETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETTS--------EEEEEECCTTSCCCEEEEECCTTCEEEEEE
T ss_pred EcCCCceeEeeeecCC-CcceEEEEeCCCCCCCEEEEecCCC--------cEEEEecCCCCceeeEEecCCCCceEEEEE
Confidence 444555 55555554 689999999998 66677776664 99999999873321 122234489999999
Q ss_pred cC-------------Cc---eeeeCCCeEEEEECCCCC----EEEEeecCCCCCeeEEEEeCC---CCEEEEEeCCCeEE
Q psy2083 82 HD-------------NY---VLSMDSSVVKIWSKDNGS----LFTCIESGDQTQFNNLCHIPE---SGMMFIANENKKIL 138 (248)
Q Consensus 82 ~~-------------d~---l~Ssdd~~IKIWD~~tGk----~~~tie~~h~~~In~l~~~pd---sgll~sa~ed~~I~ 138 (248)
+| ++ ++++.|+.|+|||.++++ +...+.+ |..+|++++|+|+ +.+|++++.|+.|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~ 234 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG-HSDWVRDVAWSPTVLLRSYLASVSQDRTCI 234 (379)
T ss_dssp CCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECC-CSSCEEEEEECCCCSSSEEEEEEETTSCEE
T ss_pred cCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEec-ccCcEeEEEECCCCCCCCeEEEEeCCCEEE
Confidence 99 44 445689999999998765 4456676 6899999999999 89999999999999
Q ss_pred EEEcCC
Q psy2083 139 TYYIPS 144 (248)
Q Consensus 139 ~w~Ip~ 144 (248)
+|++..
T Consensus 235 iwd~~~ 240 (379)
T 3jrp_A 235 IWTQDN 240 (379)
T ss_dssp EEEESS
T ss_pred EEeCCC
Confidence 999876
No 92
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.62 E-value=8.3e-15 Score=134.55 Aligned_cols=122 Identities=11% Similarity=0.223 Sum_probs=98.0
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCC-CceeEEecCCCCCCeeEEEEcCCc---e
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRA-DKPLRVKDHMYGLPIRDIKFHDNY---V 86 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs-~~pl~~~~h~~~~pI~sI~F~~d~---l 86 (248)
+.+..+..| .+.|++++|+|++..++ +++.+ |+|++||+|+ +.|+.... .|..+|.+|+|+|++ +
T Consensus 268 ~~~~~~~~~-~~~v~~i~~~p~~~~~l~tg~~d--------g~v~vwd~~~~~~~~~~~~-~h~~~v~~i~~sp~~~~~l 337 (430)
T 2xyi_A 268 KPSHTVDAH-TAEVNCLSFNPYSEFILATGSAD--------KTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETIL 337 (430)
T ss_dssp SCSEEEECC-SSCEEEEEECSSCTTEEEEEETT--------SEEEEEETTCTTSCSEEEE-CCSSCEEEEEECSSCTTEE
T ss_pred cceeEeecC-CCCeEEEEeCCCCCCEEEEEeCC--------CeEEEEeCCCCCCCeEEee-cCCCCEEEEEECCCCCCEE
Confidence 566677655 68899999999887655 55555 4999999998 46666653 234899999999986 4
Q ss_pred e-eeCCCeEEEEECCC--------------CCEEEEeecCCCCCeeEEEEeCCCC-EEEEEeCCCeEEEEEcCC
Q psy2083 87 L-SMDSSVVKIWSKDN--------------GSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPS 144 (248)
Q Consensus 87 ~-Ssdd~~IKIWD~~t--------------Gk~~~tie~~h~~~In~l~~~pdsg-ll~sa~ed~~I~~w~Ip~ 144 (248)
+ ++.|+.|+|||..+ .+.+..+.+ |...|++++|+|++. +|++++.|+.|++|.++.
T Consensus 338 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 338 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG-HTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCC-CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred EEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCC-CCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 4 45799999999987 356667776 688999999999998 999999999999999764
No 93
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.62 E-value=6.5e-15 Score=135.26 Aligned_cols=121 Identities=13% Similarity=0.139 Sum_probs=90.6
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCcee-EEecCCCCCCeeEEEEcCC-c--ee
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPL-RVKDHMYGLPIRDIKFHDN-Y--VL 87 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl-~~~~h~~~~pI~sI~F~~d-~--l~ 87 (248)
......++ ...|++++|+|.++. +++|+.| |+|+|||+.++... ....++|..+|++|+|+|. + ++
T Consensus 111 ~~~~~~~~-~~~V~~l~~~P~~~~~lasGs~d--------g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~ 181 (435)
T 4e54_B 111 ILQKAAPF-DRRATSLAWHPTHPSTVAVGSKG--------GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFY 181 (435)
T ss_dssp SCCEEEEC-SSCEEEEEECSSCTTCEEEEETT--------SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEE
T ss_pred ecccCCCC-CCCEEEEEEeCCCCCEEEEEeCC--------CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEE
Confidence 34444454 578999999996654 5555555 49999999987543 3344566699999999984 4 54
Q ss_pred -eeCCCeEEEEECCCCCEEEEeecCC--CCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 88 -SMDSSVVKIWSKDNGSLFTCIESGD--QTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 88 -Ssdd~~IKIWD~~tGk~~~tie~~h--~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++.|++|+|||.+++.. ..+..+| ...+.+++|+|++.+|++|+.|+.|.+|++.
T Consensus 182 s~s~D~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~ 239 (435)
T 4e54_B 182 ASSMEGTTRLQDFKGNIL-RVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD 239 (435)
T ss_dssp EECSSSCEEEEETTSCEE-EEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS
T ss_pred EEeCCCEEEEeeccCCce-eEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC
Confidence 46899999999986544 4443312 3467899999999999999999999999975
No 94
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.62 E-value=4.4e-15 Score=134.35 Aligned_cols=163 Identities=9% Similarity=0.062 Sum_probs=119.1
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d 84 (248)
.|..+++++..++++ +.|.+++|+|++.++++++++ .+.+|+..+++.+.. ....++.+|++|+|+|+
T Consensus 162 wd~~~~~~~~~~~~~--~~V~~v~fspdg~~l~s~s~~---------~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspd 230 (365)
T 4h5i_A 162 IDPSDLTEKFEIETR--GEVKDLHFSTDGKVVAYITGS---------SLEVISTVTGSCIARKTDFDKNWSLSKINFIAD 230 (365)
T ss_dssp EETTTTEEEEEEECS--SCCCEEEECTTSSEEEEECSS---------CEEEEETTTCCEEEEECCCCTTEEEEEEEEEET
T ss_pred eECCCCcEEEEeCCC--CceEEEEEccCCceEEeccce---------eEEEEEeccCcceeeeecCCCCCCEEEEEEcCC
Confidence 456778888888754 689999999987766666544 578888888876554 34455689999999999
Q ss_pred c--ee-eeCCC----eEEEEECCCCCE----EEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccc
Q psy2083 85 Y--VL-SMDSS----VVKIWSKDNGSL----FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCG 153 (248)
Q Consensus 85 ~--l~-Ssdd~----~IKIWD~~tGk~----~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs 153 (248)
+ ++ ++.++ .+++||...+.. ...+.+ |..+|++++|+|||.+|++|+.|++|++|++....+.
T Consensus 231 g~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~----- 304 (365)
T 4h5i_A 231 DTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN-RFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMS----- 304 (365)
T ss_dssp TEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES-SCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEE-----
T ss_pred CCEEEEEecCCcceeEEeecccccceecceeeeeecC-CCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEE-----
Confidence 7 33 34444 688999887654 234556 6889999999999999999999999999998753221
Q ss_pred cccchhhhhhcc--c---cccccCCceeecHhHHhhcCCccc
Q psy2083 154 FLDNLTEELEEN--I---IENVYDDYKFVTRQELEDLGLGHL 190 (248)
Q Consensus 154 ~ld~~tee~e~~--~---~~~~yd~y~fvt~~~l~~l~~~~l 190 (248)
..+ ++-| . ...-.|+-.++|-.....+.++++
T Consensus 305 --~~~---~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 305 --KIF---KQAHSFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp --EEE---TTSSSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred --EEe---cCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 111 1111 1 223357778888888888888876
No 95
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.61 E-value=1.1e-14 Score=141.88 Aligned_cols=128 Identities=13% Similarity=0.188 Sum_probs=109.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+|+.+..+.+| .+.|.+++|+|++..+++++.++ +|++||+++++++.... .|..+|++++|+|++
T Consensus 40 wd~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg--------~i~vw~~~~~~~~~~~~-~~~~~v~~~~~s~~~ 109 (814)
T 3mkq_A 40 WNYETQVEVRSIQVT-ETPVRAGKFIARKNWIIVGSDDF--------RIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTK 109 (814)
T ss_dssp EETTTTEEEEEEECC-SSCEEEEEEEGGGTEEEEEETTS--------EEEEEETTTCCEEEEEE-CCSSCEEEEEECSSS
T ss_pred EECCCCceEEEEecC-CCcEEEEEEeCCCCEEEEEeCCC--------eEEEEECCCCcEEEEEe-cCCCCEEEEEEeCCC
Confidence 455778899998876 68999999999888888877764 99999999998877653 344899999999997
Q ss_pred --ee-eeCCCeEEEEECCCC-CEEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 --VL-SMDSSVVKIWSKDNG-SLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l~-Ssdd~~IKIWD~~tG-k~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.|++|++||.+++ .....+.+ |..+|.+++|+| ++.+|++++.|++|.+|++..
T Consensus 110 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~ 172 (814)
T 3mkq_A 110 PYVLSGSDDLTVKLWNWENNWALEQTFEG-HEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (814)
T ss_dssp SEEEEEETTSEEEEEEGGGTSEEEEEEEC-CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred CEEEEEcCCCEEEEEECCCCceEEEEEcC-CCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 44 568999999999987 66677777 689999999999 888999999999999999854
No 96
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.61 E-value=3e-14 Score=130.29 Aligned_cols=126 Identities=7% Similarity=0.071 Sum_probs=106.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+++++..+.+| .+.|.+++|+|++..+++++.|+ +|++||+++++++.... +|..+|.++.|++..
T Consensus 295 wd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~sg~~dg--------~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~ 364 (464)
T 3v7d_B 295 WDVAQMKCLYILSGH-TDRIYSTIYDHERKRCISASMDT--------TIRIWDLENGELMYTLQ-GHTALVGLLRLSDKF 364 (464)
T ss_dssp EETTTTEEEEEECCC-SSCEEEEEEETTTTEEEEEETTS--------CEEEEETTTTEEEEEEC-CCSSCEEEEEECSSE
T ss_pred EECCCCcEEEEecCC-CCCEEEEEEcCCCCEEEEEeCCC--------cEEEEECCCCcEEEEEe-CCCCcEEEEEEcCCE
Confidence 466788888888776 68999999999888788877775 99999999999887763 345899999999766
Q ss_pred -eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.|++|++||.++++....+.. ...+..++|+|++.+|++|+ |+.|++|++..
T Consensus 365 l~s~s~dg~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~ 421 (464)
T 3v7d_B 365 LVSAAADGSIRGWDANDYSRKFSYHH--TNLSAITTFYVSDNILVSGS-ENQFNIYNLRS 421 (464)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEEC--TTCCCEEEEEECSSEEEEEE-TTEEEEEETTT
T ss_pred EEEEeCCCcEEEEECCCCceeeeecC--CCCccEEEEEeCCCEEEEec-CCeEEEEECCC
Confidence 5557899999999999988777764 67888999999999999999 89999999876
No 97
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.60 E-value=2e-14 Score=129.79 Aligned_cols=118 Identities=9% Similarity=0.159 Sum_probs=93.1
Q ss_pred EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEe------cCCCCCCeeEEEEcCCc---
Q psy2083 16 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVK------DHMYGLPIRDIKFHDNY--- 85 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~------~h~~~~pI~sI~F~~d~--- 85 (248)
.+..+|...|.+++|+|++..++++ .| |+|+|||++++ +++... ...|..+|++++|+|++
T Consensus 171 ~~~~~h~~~v~~~~~~~~~~~l~s~-~d--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 241 (447)
T 3dw8_B 171 IFANAHTYHINSISINSDYETYLSA-DD--------LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNT 241 (447)
T ss_dssp EECSCCSSCCCEEEECTTSSEEEEE-CS--------SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTE
T ss_pred EeccCCCcceEEEEEcCCCCEEEEe-CC--------CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcE
Confidence 4444458999999999977666665 55 49999999954 444422 22445899999999984
Q ss_pred ee-eeCCCeEEEEECCCCCE----EEEeecCCCC------------CeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 VL-SMDSSVVKIWSKDNGSL----FTCIESGDQT------------QFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 l~-Ssdd~~IKIWD~~tGk~----~~tie~~h~~------------~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.|+.|+|||.++++. +..+.. |.. +|++++|+|+|.+|+++++ +.|++|++..
T Consensus 242 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 242 FVYSSSKGTIRLCDMRASALCDRHSKLFEE-PEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp EEEEETTSCEEEEETTTCSSSCTTCEEECC-C-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC
T ss_pred EEEEeCCCeEEEEECcCCccccceeeEecc-CCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC
Confidence 44 46899999999999987 788887 454 8999999999999999999 9999999976
No 98
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.60 E-value=2e-14 Score=131.95 Aligned_cols=123 Identities=11% Similarity=0.244 Sum_probs=98.0
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC---ceeEEecCCCCCCeeEEEEcCCc---e-e
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD---KPLRVKDHMYGLPIRDIKFHDNY---V-L 87 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~---~pl~~~~h~~~~pI~sI~F~~d~---l-~ 87 (248)
..+.+| .+.|.+++|+|+++.++++++++ |+|++||+|++ +++.... .|..+|++|+|+|++ + +
T Consensus 225 ~~~~~h-~~~v~~v~~~p~~~~~l~s~~~d-------g~i~i~d~~~~~~~~~~~~~~-~~~~~v~~i~~~p~~~~~l~t 295 (430)
T 2xyi_A 225 NIFTGH-TAVVEDVAWHLLHESLFGSVADD-------QKLMIWDTRNNNTSKPSHTVD-AHTAEVNCLSFNPYSEFILAT 295 (430)
T ss_dssp EEECCC-SSCEEEEEECSSCTTEEEEEETT-------SEEEEEETTCSCSSSCSEEEE-CCSSCEEEEEECSSCTTEEEE
T ss_pred eeecCC-CCCEeeeEEeCCCCCEEEEEeCC-------CeEEEEECCCCCCCcceeEee-cCCCCeEEEEeCCCCCCEEEE
Confidence 344444 78899999999666655444433 49999999987 5665542 344899999999986 4 4
Q ss_pred eeCCCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCC
Q psy2083 88 SMDSSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPES-GMMFIANENKKILTYYIPSLGP 147 (248)
Q Consensus 88 Ssdd~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~Ip~lG~ 147 (248)
++.|++|+|||.++ ++++.++.. |...|++++|+|++ .+|++++.|++|.+|++...+.
T Consensus 296 g~~dg~v~vwd~~~~~~~~~~~~~-h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~ 356 (430)
T 2xyi_A 296 GSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 356 (430)
T ss_dssp EETTSEEEEEETTCTTSCSEEEEC-CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTC
T ss_pred EeCCCeEEEEeCCCCCCCeEEeec-CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcc
Confidence 56899999999998 678889988 68999999999999 5799999999999999987654
No 99
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.60 E-value=1.9e-14 Score=132.53 Aligned_cols=117 Identities=7% Similarity=0.020 Sum_probs=96.4
Q ss_pred EEecCCCCCeeEEEEeCC---CCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-ee
Q psy2083 16 CIESGDQTQFNNLCHIPE---SGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SM 89 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~---~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ss 89 (248)
.+.+| .+.|.+++|+|+ +.++++++.|+ +|++||+++++++.....+|..+|++++|+ ++ ++ ++
T Consensus 190 ~~~~h-~~~v~~~~~sp~~~~~~~l~s~~~d~--------~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~ 259 (450)
T 2vdu_B 190 PILGH-VSMLTDVHLIKDSDGHQFIITSDRDE--------HIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAG 259 (450)
T ss_dssp CSEEC-SSCEEEEEEEECTTSCEEEEEEETTS--------CEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEE
T ss_pred eeecc-cCceEEEEEcCCCCCCcEEEEEcCCC--------cEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEe
Confidence 44444 688999999998 65677777664 999999999988776444555899999999 76 44 56
Q ss_pred CCCeEEEEECCCCCEEEEeecC------------------------CCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEc
Q psy2083 90 DSSVVKIWSKDNGSLFTCIESG------------------------DQTQFNNLCHIPESGMMFIAN-ENKKILTYYI 142 (248)
Q Consensus 90 dd~~IKIWD~~tGk~~~tie~~------------------------h~~~In~l~~~pdsgll~sa~-ed~~I~~w~I 142 (248)
.|++|+|||.++|+++.++..+ ....|.+++++|++.+|++++ .++.|.+|++
T Consensus 260 ~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 260 GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred CCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 8999999999999999988631 135789999999999999999 8999999998
No 100
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.60 E-value=1e-14 Score=132.77 Aligned_cols=115 Identities=9% Similarity=0.152 Sum_probs=88.2
Q ss_pred CCCCCeeEEEEeC--------CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc---ee
Q psy2083 20 GDQTQFNNLCHIP--------ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY---VL 87 (248)
Q Consensus 20 ~~~~~V~~~~~~~--------~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~---l~ 87 (248)
+|.+.|++++|+| ++.+|+++|.|. +|+|||++++.++.. ..|. .+|.+|+|+|++ ++
T Consensus 134 gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~--------tv~~Wd~~~~~~~~~~~~~~--~~v~~v~~~p~~~~~l~ 203 (393)
T 4gq1_A 134 GHHNFVNDIDIADVYSADNRLAEQVIASVGDDC--------TLIIWRLTDEGPILAGYPLS--SPGISVQFRPSNPNQLI 203 (393)
T ss_dssp SCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS--------EEEEEEEETTEEEEEEEECS--SCEEEEEEETTEEEEEE
T ss_pred CCCCceEEEEEccccccccCCCCCEEEEEECCC--------eEEEEECCCCceeeeecCCC--CCcEEEEECCCCCceEE
Confidence 4589999999997 555666777664 999999999877654 4555 799999999985 44
Q ss_pred -eeCCCeEEEEECCCCCEEEEeec------------------------CCCCCeeEEEEe-CCCCEEEEEeCCCeEEEEE
Q psy2083 88 -SMDSSVVKIWSKDNGSLFTCIES------------------------GDQTQFNNLCHI-PESGMMFIANENKKILTYY 141 (248)
Q Consensus 88 -Ssdd~~IKIWD~~tGk~~~tie~------------------------~h~~~In~l~~~-pdsgll~sa~ed~~I~~w~ 141 (248)
++.|++|+|||.++++....... +|...+.++.|+ ||+..|++++.|+++++|+
T Consensus 204 ~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd 283 (393)
T 4gq1_A 204 VGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWN 283 (393)
T ss_dssp EEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEE
T ss_pred ecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEE
Confidence 46899999999998875443221 246788899987 7999999999999999999
Q ss_pred cCC
Q psy2083 142 IPS 144 (248)
Q Consensus 142 Ip~ 144 (248)
+..
T Consensus 284 ~~~ 286 (393)
T 4gq1_A 284 LFA 286 (393)
T ss_dssp C--
T ss_pred Ccc
Confidence 743
No 101
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.58 E-value=2.7e-14 Score=137.03 Aligned_cols=118 Identities=8% Similarity=0.016 Sum_probs=91.5
Q ss_pred EEecCCCCCeeEEEEeCC------CCcEEEeecCceeeeecCCeeEEEEcCCCc-----------eeEEecCCCCCCeeE
Q psy2083 16 CIESGDQTQFNNLCHIPE------SGMMFIANENKKILTYYIPAFYLYDIRADK-----------PLRVKDHMYGLPIRD 78 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~------~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~-----------pl~~~~h~~~~pI~s 78 (248)
++.++ .+.|.+++|+|+ +++|++++.|+ +|+|||+..+. |..+. .+|..+|++
T Consensus 202 ~l~~~-~~~V~~v~wsp~~~~~~~~~~LAs~s~Dg--------tvrlWd~~~~~~~~~~~~~~~~p~~~l-~~h~~~v~s 271 (524)
T 2j04_B 202 TIVHS-FGEVWDLKWHEGCHAPHLVGCLSFVSQEG--------TINFLEIIDNATDVHVFKMCEKPSLTL-SLADSLITT 271 (524)
T ss_dssp EEEEC-CCSEEEEEECSSCCCSSSSCEEEEEETTS--------CEEEEECCCCSSSSSEEECCCSCSEEE-CCTTTCEEE
T ss_pred EEEec-CCcEEEEEECCCCCCCCCCceEEEEecCC--------eEEEEEcCCCccccccceeecCceEEE-EcCCCCEEE
Confidence 34544 688999999996 34566666664 99999998763 22222 234589999
Q ss_pred EEEcCCc--eeeeCCCeEEEEECCCC-CEEEEeecCCCCCeeEE--EEeCCC-CEEEEEeCCCeEEEEEcCC
Q psy2083 79 IKFHDNY--VLSMDSSVVKIWSKDNG-SLFTCIESGDQTQFNNL--CHIPES-GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 79 I~F~~d~--l~Ssdd~~IKIWD~~tG-k~~~tie~~h~~~In~l--~~~pds-gll~sa~ed~~I~~w~Ip~ 144 (248)
++|+++. ++++.|++|+|||++++ .+...+.+ |..+|+++ +|+|+| .+|++|+.|++|++|++..
T Consensus 272 v~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~-H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~ 342 (524)
T 2j04_B 272 FDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQV-HDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD 342 (524)
T ss_dssp EEESSSSEEEEEETTSEEEEEETTBCSSCSEEEEC-SSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG
T ss_pred EEecCCCeEEEEeCCCEEEEEECCCCCCceEEeec-ccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC
Confidence 9999876 44568999999999987 45667787 69999999 567887 8999999999999999743
No 102
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.58 E-value=3.8e-14 Score=143.73 Aligned_cols=128 Identities=14% Similarity=0.139 Sum_probs=103.5
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeE--E--------ecCCCCCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLR--V--------KDHMYGLP 75 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~--~--------~~h~~~~p 75 (248)
.|..+|+++.++.+ .+.|++++|+|++.++++++.|+ +|++||+++++... . ...+|..+
T Consensus 84 Wd~~~~~~~~~~~~--~~~V~~v~~sp~g~~l~sgs~dg--------~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~ 153 (902)
T 2oaj_A 84 LSLYSQKVLTTVFV--PGKITSIDTDASLDWMLIGLQNG--------SMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSP 153 (902)
T ss_dssp EETTTCSEEEEEEC--SSCEEEEECCTTCSEEEEEETTS--------CEEEEETTTTEEEEEEECCHHHHHTCSSSCCCC
T ss_pred EECCCCcEEEEEcC--CCCEEEEEECCCCCEEEEEcCCC--------cEEEEECCCCccccceeccccccccccccCCCC
Confidence 35567888888864 37899999999888788877774 99999999986531 1 11345589
Q ss_pred eeEEEEcCCc----eeeeCCCeEEEEECCCCCEEEEeecC-----------------CCCCeeEEEEeCCCCEEEEEeCC
Q psy2083 76 IRDIKFHDNY----VLSMDSSVVKIWSKDNGSLFTCIESG-----------------DQTQFNNLCHIPESGMMFIANEN 134 (248)
Q Consensus 76 I~sI~F~~d~----l~Ssdd~~IKIWD~~tGk~~~tie~~-----------------h~~~In~l~~~pdsgll~sa~ed 134 (248)
|++|+|+|+. +++++|++| |||.++++++.++..+ |...|++++|+|||.+|++|++|
T Consensus 154 V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~D 232 (902)
T 2oaj_A 154 IVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHED 232 (902)
T ss_dssp CCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECC
Confidence 9999999963 445689999 9999999999888751 13679999999999999999999
Q ss_pred CeEEEEEcCC
Q psy2083 135 KKILTYYIPS 144 (248)
Q Consensus 135 ~~I~~w~Ip~ 144 (248)
++|++|++..
T Consensus 233 g~i~lWd~~~ 242 (902)
T 2oaj_A 233 NSLVFWDANS 242 (902)
T ss_dssp CCEEEEETTT
T ss_pred CeEEEEECCC
Confidence 9999999854
No 103
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.58 E-value=6e-15 Score=134.38 Aligned_cols=109 Identities=12% Similarity=0.095 Sum_probs=82.3
Q ss_pred EEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEE----ecCCCCCCeeEEEEcC--------Cc--eee-eC
Q psy2083 27 NLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRV----KDHMYGLPIRDIKFHD--------NY--VLS-MD 90 (248)
Q Consensus 27 ~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~----~~h~~~~pI~sI~F~~--------d~--l~S-sd 90 (248)
.+.++|.++. +++++.| ++|+|||++.+..... ...+|..+|++|+|+| ++ |+| ++
T Consensus 93 ~~~~~~~~~~~las~~~d--------~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~ 164 (393)
T 4gq1_A 93 NVNSSPVYSLFLACVCQD--------NTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD 164 (393)
T ss_dssp ----CCEEEEEEEEEETT--------SCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET
T ss_pred ceeecCCCCCEEEEEeCC--------CcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEEC
Confidence 3344444444 4455555 4999999999854322 1345669999999997 44 554 69
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCC-EEEEEeCCCeEEEEEcCC
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPS 144 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsg-ll~sa~ed~~I~~w~Ip~ 144 (248)
|++|||||.+++.++..+.+ |..+|.+++|+|+++ +|++|+.|++|++|++..
T Consensus 165 D~tv~~Wd~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t 218 (393)
T 4gq1_A 165 DCTLIIWRLTDEGPILAGYP-LSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTL 218 (393)
T ss_dssp TSEEEEEEEETTEEEEEEEE-CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred CCeEEEEECCCCceeeeecC-CCCCcEEEEECCCCCceEEecCCCCEEEEEECCC
Confidence 99999999999888888887 589999999999874 899999999999999754
No 104
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.58 E-value=4e-14 Score=130.30 Aligned_cols=124 Identities=13% Similarity=0.153 Sum_probs=101.4
Q ss_pred cCceeEEEec-CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeE----E-ecCCCCCCeeEEEEcC
Q psy2083 10 KGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLR----V-KDHMYGLPIRDIKFHD 83 (248)
Q Consensus 10 ~G~~~~~~~~-~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~----~-~~h~~~~pI~sI~F~~ 83 (248)
+|+++..+.. .+...|.+++|+|++..+++++.++ .|.+||+++++... . ..|. .+|++|+|+|
T Consensus 136 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g--------~v~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~sp 205 (450)
T 2vdu_B 136 SKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFG--------DVYSIDINSIPEEKFTQEPILGHV--SMLTDVHLIK 205 (450)
T ss_dssp SSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS--------EEEEEETTSCCCSSCCCCCSEECS--SCEEEEEEEE
T ss_pred CCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCC--------cEEEEecCCcccccccceeeeccc--CceEEEEEcC
Confidence 6777777752 2357899999999887787776664 89999999886542 2 3444 8999999999
Q ss_pred C---c--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 84 N---Y--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 84 d---~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ + ++ ++.|+.|+|||..+++.+.++..+|...|++++|+ |+.+|++|+.|++|++|++..
T Consensus 206 ~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~ 271 (450)
T 2vdu_B 206 DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKT 271 (450)
T ss_dssp CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTT
T ss_pred CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCC
Confidence 8 6 44 46799999999999999888543368999999999 999999999999999999865
No 105
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.57 E-value=6.4e-14 Score=143.33 Aligned_cols=118 Identities=10% Similarity=0.155 Sum_probs=101.4
Q ss_pred EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-eeCCC
Q psy2083 16 CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSS 92 (248)
Q Consensus 16 ~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~ 92 (248)
.+.+| .+.|++++|+|++..+++++.|+ +|++||+++++++.... +|..+|.+++|+|++ ++ ++.|+
T Consensus 610 ~~~~h-~~~v~~~~~s~~~~~l~s~~~d~--------~i~vw~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~~~d~ 679 (1249)
T 3sfz_A 610 VVRPH-TDAVYHACFSQDGQRIASCGADK--------TLQVFKAETGEKLLDIK-AHEDEVLCCAFSSDDSYIATCSADK 679 (1249)
T ss_dssp EECCC-SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEecc-cccEEEEEECCCCCEEEEEeCCC--------eEEEEECCCCCEEEEec-cCCCCEEEEEEecCCCEEEEEeCCC
Confidence 34454 78999999999888888877774 99999999998877653 445899999999997 44 46899
Q ss_pred eEEEEECCCCCEEEEeecCCCCCeeEEEEeC--CCCEEEEEeCCCeEEEEEcCC
Q psy2083 93 VVKIWSKDNGSLFTCIESGDQTQFNNLCHIP--ESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 93 ~IKIWD~~tGk~~~tie~~h~~~In~l~~~p--dsgll~sa~ed~~I~~w~Ip~ 144 (248)
+|+|||..+|+++.++.+ |...|++++|+| ++.++++|+.|+.|.+|++..
T Consensus 680 ~v~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~ 732 (1249)
T 3sfz_A 680 KVKIWDSATGKLVHTYDE-HSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ 732 (1249)
T ss_dssp EEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS
T ss_pred eEEEEECCCCceEEEEcC-CCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC
Confidence 999999999999999998 699999999999 556899999999999999865
No 106
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.57 E-value=7.4e-15 Score=137.02 Aligned_cols=114 Identities=11% Similarity=0.203 Sum_probs=91.0
Q ss_pred CCCeeEEEEeCCCCcEEE---eecCceeeeecCCeeEEEEcCCC--------ceeEE--ecCCCCCCeeEEEEcCC-c--
Q psy2083 22 QTQFNNLCHIPESGMMFI---ANENKKILTYYIPAFYLYDIRAD--------KPLRV--KDHMYGLPIRDIKFHDN-Y-- 85 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~---ag~d~~~~~~~~G~V~LwDlRs~--------~pl~~--~~h~~~~pI~sI~F~~d-~-- 85 (248)
.+.|.+++|+|++.++++ +++.+ |+|+|||++++ +|+.. ...+|+.+|++|+|+|+ .
T Consensus 92 ~~~v~~l~~spdg~~lav~~~sgs~d-------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~ 164 (434)
T 2oit_A 92 KFPIHHLALSCDNLTLSACMMSSEYG-------SIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSM 164 (434)
T ss_dssp SSCEEEEEECTTSCEEEEEEEETTTE-------EEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTE
T ss_pred CCcccEEEEcCCCCEEEEEEeccCCC-------ceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCE
Confidence 457999999998877773 33333 49999999875 44332 22345589999999997 3
Q ss_pred ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 86 VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 86 l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++ ++.|++|+|||.+++..+....+ |...|++++|+|+|.+|++|+.|++|.+|++.
T Consensus 165 las~s~Dg~v~iwD~~~~~~~~~~~~-~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 165 VAVCLADGSIAVLQVTETVKVCATLP-STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EEEEETTSCEEEEEESSSEEEEEEEC-GGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred EEEEECCCeEEEEEcCCCcceeeccC-CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 44 46899999999999977766666 57899999999999999999999999999975
No 107
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.57 E-value=5.1e-14 Score=142.78 Aligned_cols=113 Identities=12% Similarity=0.140 Sum_probs=97.4
Q ss_pred CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-eee-eCCCeEEEE
Q psy2083 20 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VLS-MDSSVVKIW 97 (248)
Q Consensus 20 ~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~S-sdd~~IKIW 97 (248)
+|.+.|++++|+|++.++++++.|+ +|+|||....+.+....| ..+|++|+|+|+. |++ +.|++|+||
T Consensus 15 gh~~~V~~lafspdg~~lAsgs~Dg--------~I~lw~~~~~~~~~~~~~--~~~V~~l~fspg~~L~S~s~D~~v~lW 84 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQNLLAIATVTG--------EVHIYGQQQVEVVIKLED--RSAIKEMRFVKGIYLVVINAKDTVYVL 84 (902)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTS--------EEEEECSTTCEEEEECSS--CCCEEEEEEETTTEEEEEETTCEEEEE
T ss_pred CCCCCcEEEEECCCCCEEEEEeCCC--------EEEEEeCCCcEEEEEcCC--CCCEEEEEEcCCCEEEEEECcCeEEEE
Confidence 3478999999999888787777774 999999988776655544 4899999999954 554 589999999
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|.++++++.++.. ...|++++|+|++.+|++|+.|++|++|++..
T Consensus 85 d~~~~~~~~~~~~--~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~ 129 (902)
T 2oaj_A 85 SLYSQKVLTTVFV--PGKITSIDTDASLDWMLIGLQNGSMIVYDIDR 129 (902)
T ss_dssp ETTTCSEEEEEEC--SSCEEEEECCTTCSEEEEEETTSCEEEEETTT
T ss_pred ECCCCcEEEEEcC--CCCEEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 9999999999974 68999999999999999999999999999865
No 108
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.57 E-value=2.4e-14 Score=127.84 Aligned_cols=115 Identities=14% Similarity=0.214 Sum_probs=94.7
Q ss_pred CCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCceeEEecCCC-----CCCeeEEEEcCCc---ee-eeC
Q psy2083 21 DQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADKPLRVKDHMY-----GLPIRDIKFHDNY---VL-SMD 90 (248)
Q Consensus 21 ~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~-----~~pI~sI~F~~d~---l~-Ssd 90 (248)
|.+.|.+++|+|+++.++ +++.+ |+|++||+++++++....... ..+|++++|+|++ ++ +++
T Consensus 164 ~~~~v~~~~~~~~~~~~l~~~~~d--------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 235 (416)
T 2pm9_A 164 SVDEVISLAWNQSLAHVFASAGSS--------NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATG 235 (416)
T ss_dssp SSCCCCEEEECSSCTTEEEEESSS--------SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEEC
T ss_pred CCCCeeEEEeCCCCCcEEEEEcCC--------CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEEC
Confidence 468899999999855544 54444 499999999998877764321 5789999999985 44 457
Q ss_pred CC---eEEEEECCCC-CEEEEee-cCCCCCeeEEEEeC-CCCEEEEEeCCCeEEEEEcCC
Q psy2083 91 SS---VVKIWSKDNG-SLFTCIE-SGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 91 d~---~IKIWD~~tG-k~~~tie-~~h~~~In~l~~~p-dsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ .|++||.+++ +++..+. + |...|++++|+| ++.+|++++.|++|++|++..
T Consensus 236 d~~~~~i~~~d~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~ 294 (416)
T 2pm9_A 236 SDNDPSILIWDLRNANTPLQTLNQG-HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES 294 (416)
T ss_dssp CSSSCCCCEEETTSTTSCSBCCCSC-CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS
T ss_pred CCCCceEEEEeCCCCCCCcEEeecC-ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC
Confidence 77 9999999987 6777887 6 689999999999 999999999999999999865
No 109
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.56 E-value=2.5e-14 Score=139.41 Aligned_cols=111 Identities=10% Similarity=0.112 Sum_probs=89.4
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCC---CCCeeEEEEcCCc--ee-eeCCCeEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMY---GLPIRDIKFHDNY--VL-SMDSSVVK 95 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~---~~pI~sI~F~~d~--l~-Ssdd~~IK 95 (248)
++.|++++|+|++..+++++.++ +|+|||..+ .+...+|.- +..|.+++||||+ |+ +++|++|+
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg--------~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk 154 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNG--------NVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ 154 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTS--------CEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCC--------cEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEE
Confidence 68899999999998888888875 999999544 455445320 1259999999998 44 46899999
Q ss_pred EEECCCCC-------EEEEee---cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 96 IWSKDNGS-------LFTCIE---SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 96 IWD~~tGk-------~~~tie---~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|||..+|+ .+.++. .+|...|.+++|+||| +++++.|+.|++|++-.
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~ 211 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSA 211 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCS
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCC
Confidence 99999986 367874 2367899999999999 88899999999999743
No 110
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.56 E-value=8.4e-14 Score=123.09 Aligned_cols=127 Identities=12% Similarity=0.127 Sum_probs=101.9
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec------------CCCC
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD------------HMYG 73 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~------------h~~~ 73 (248)
+...++....+.+| .+.|++++|+| ++..+++++.|+ +|++||+.++....... ..|.
T Consensus 29 ~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~~l~~~~~dg--------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (408)
T 4a11_B 29 GLELNKDRDVERIH-GGGINTLDIEPVEGRYMLSGGSDG--------VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHR 99 (408)
T ss_dssp TEEECTTEEECCCC-SSCEEEEEECTTTCCEEEEEETTS--------CEEEEECCCCSSSSCEEECEEEEECTTCTTCCS
T ss_pred ccccCcceeeeecc-CCcEEEEEEecCCCCEEEEEcCCC--------eEEEEECCCCcccceEeccccccccccccccCC
Confidence 34456666666665 79999999999 777777777774 99999999885543322 2355
Q ss_pred CCeeEEEEcC-Cc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC---CEEEEEeCCCeEEEEEcCC
Q psy2083 74 LPIRDIKFHD-NY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES---GMMFIANENKKILTYYIPS 144 (248)
Q Consensus 74 ~pI~sI~F~~-d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds---gll~sa~ed~~I~~w~Ip~ 144 (248)
.+|++++|+| +. ++ ++.|+.|++||.++++....+.. ...+.++++.|.+ .++++++.++.|.+|++..
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNF--EETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEEC--SSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccC--CCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 8999999999 44 44 45799999999999999998886 7899999999855 4999999999999999865
No 111
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.56 E-value=1.7e-13 Score=121.97 Aligned_cols=126 Identities=10% Similarity=0.145 Sum_probs=104.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|..+|+++..+..+ ..+.+++|+|++..++++++.+ |+|++||+++++.+....+. .+|.+++|+|++
T Consensus 17 ~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~d-------~~i~v~d~~~~~~~~~~~~~--~~v~~~~~spdg 85 (391)
T 1l0q_A 17 IDVTSNKVTATIPVG--SNPMGAVISPDGTKVYVANAHS-------NDVSIIDTATNNVIATVPAG--SSPQGVAVSPDG 85 (391)
T ss_dssp EETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEEGGG-------TEEEEEETTTTEEEEEEECS--SSEEEEEECTTS
T ss_pred EECCCCeEEEEeecC--CCcceEEECCCCCEEEEECCCC-------CeEEEEECCCCeEEEEEECC--CCccceEECCCC
Confidence 567789999998876 5689999999888776555433 49999999999888877655 489999999997
Q ss_pred --e-eee-CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEE-EEEeCCCeEEEEEcCC
Q psy2083 86 --V-LSM-DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMM-FIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l-~Ss-dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll-~sa~ed~~I~~w~Ip~ 144 (248)
+ +++ +++.|++||..+++.+..+.. ...+++++|+|++..| ++++.+++|.+|++..
T Consensus 86 ~~l~~~~~~~~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 147 (391)
T 1l0q_A 86 KQVYVTNMASSTLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT 147 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CEEEEEECCCCEEEEEECCCCeEEEEEeC--CCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 3 344 679999999999999988887 5688999999999877 6778899999999754
No 112
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.56 E-value=4.8e-14 Score=122.59 Aligned_cols=121 Identities=10% Similarity=0.104 Sum_probs=97.0
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-Cce-eEEecCCCCCCeeEEEEcC-Cc--
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-DKP-LRVKDHMYGLPIRDIKFHD-NY-- 85 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~p-l~~~~h~~~~pI~sI~F~~-d~-- 85 (248)
++++.++. |.+.|.++++.|++ +++++.++ +|++||+++ +.. .......+..+|.+|+|+| ++
T Consensus 141 ~~~~~~~~--~~~~v~~~~~~~~~--l~~~~~d~--------~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 208 (342)
T 1yfq_A 141 NLNSNNTK--VKNKIFTMDTNSSR--LIVGMNNS--------QVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEG 208 (342)
T ss_dssp ESCSSSSS--SCCCEEEEEECSSE--EEEEESTT--------EEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCE
T ss_pred CCeeeEEe--eCCceEEEEecCCc--EEEEeCCC--------eEEEEECCccccccceeeecCCCCceeEEEECCCCCCE
Confidence 55555555 35789999998865 66766664 899999998 543 3334444558999999999 76
Q ss_pred -eeeeCCCeEEEEECCCC------CEEEEeecCCCC---------CeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VLSMDSSVVKIWSKDNG------SLFTCIESGDQT---------QFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~Ssdd~~IKIWD~~tG------k~~~tie~~h~~---------~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.++.|+|||.+.+ +....+.. |.. +|++++|+|++.+|++++.|+.|.+|++..
T Consensus 209 l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 209 YACSSIDGRVAVEFFDDQGDDYNSSKRFAFRC-HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp EEEEETTSEEEEEECCTTCCSTTCTTCEEEEC-CCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred EEEEecCCcEEEEEEcCCCcccccccceeeec-ccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence 55568999999999987 88888887 444 999999999999999999999999999864
No 113
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.55 E-value=9.2e-14 Score=120.76 Aligned_cols=115 Identities=12% Similarity=0.168 Sum_probs=94.0
Q ss_pred ecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc----eeEEecCCCCCCeeEEEEcCCc---e-eee
Q psy2083 18 ESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK----PLRVKDHMYGLPIRDIKFHDNY---V-LSM 89 (248)
Q Consensus 18 ~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~----pl~~~~h~~~~pI~sI~F~~d~---l-~Ss 89 (248)
..+|.+.|.+++|+|++..+++++.|+ +|++||+.++. +.....|. .+|++++|+|++ + +++
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~--------~v~iw~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~~ 76 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDG--------SLTVYKFDIQAKNVDLLQSLRYK--HPLLCCNFIDNTDLQIYVGT 76 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTS--------EEEEEEEETTTTEEEEEEEEECS--SCEEEEEEEESSSEEEEEEE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCC--------eEEEEEeCCCCccccceeeeecC--CceEEEEECCCCCcEEEEEc
Confidence 334578999999999888788877775 99999999887 44445554 899999999873 4 446
Q ss_pred CCCeEEEEEC-CCCCEEEEeec-CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 90 DSSVVKIWSK-DNGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 90 dd~~IKIWD~-~tGk~~~tie~-~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.|+.|++||. ++++. ..+.+ .|...|++++|+| +++|++++.|+.|.+|++..
T Consensus 77 ~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 77 VQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp TTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHH
T ss_pred CCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccc
Confidence 7999999999 87765 55554 0489999999999 99999999999999999864
No 114
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.55 E-value=1.8e-13 Score=127.96 Aligned_cols=123 Identities=11% Similarity=0.141 Sum_probs=102.6
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCC-cEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCC---CeeEEEEcCC-
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGL---PIRDIKFHDN- 84 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g-~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~---pI~sI~F~~d- 84 (248)
+++.+..+.+| .+.|..++|+|++. .+++++.|+ +|++||+++++++.... .|.. +|++++|+|+
T Consensus 149 ~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d~--------~v~vwd~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~ 218 (615)
T 1pgu_A 149 SGNSLGEVSGH-SQRINACHLKQSRPMRSMTVGDDG--------SVVFYQGPPFKFSASDR-THHKQGSFVRDVEFSPDS 218 (615)
T ss_dssp TCCEEEECCSC-SSCEEEEEECSSSSCEEEEEETTT--------EEEEEETTTBEEEEEEC-SSSCTTCCEEEEEECSTT
T ss_pred CCCcceeeecC-CccEEEEEECCCCCcEEEEEeCCC--------cEEEEeCCCcceeeeec-ccCCCCceEEEEEECCCC
Confidence 45566666665 78999999999877 466666664 99999999998877653 2336 8999999999
Q ss_pred c--ee-eeCCCeEEEEECCCCCEEEEe-e---cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 85 Y--VL-SMDSSVVKIWSKDNGSLFTCI-E---SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 85 ~--l~-Ssdd~~IKIWD~~tGk~~~ti-e---~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+ ++ ++.|+.|++||.++++.+..+ . . |..+|++++|+ ++.+|++++.|+.|++|++..
T Consensus 219 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~ 283 (615)
T 1pgu_A 219 GEFVITVGSDRKISCFDGKSGEFLKYIEDDQEP-VQGGIFALSWL-DSQKFATVGADATIRVWDVTT 283 (615)
T ss_dssp CCEEEEEETTCCEEEEETTTCCEEEECCBTTBC-CCSCEEEEEES-SSSEEEEEETTSEEEEEETTT
T ss_pred CCEEEEEeCCCeEEEEECCCCCEeEEecccccc-cCCceEEEEEc-CCCEEEEEcCCCcEEEEECCC
Confidence 6 44 568999999999999999999 5 5 68999999999 999999999999999999875
No 115
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.55 E-value=5.1e-13 Score=114.64 Aligned_cols=128 Identities=9% Similarity=0.170 Sum_probs=105.8
Q ss_pred chhcCceeEEEe-cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGSLFTCIE-SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~~~~~~~-~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
|..+|+++.++. ++|...|.+++|+|++..+++++.|+ +|+|||+++++++.... +|...+.++.+.+..
T Consensus 51 d~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg--------~v~iw~~~~~~~~~~~~-~h~~~~~~~~~~~~~ 121 (318)
T 4ggc_A 51 SASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA--------EVQLWDVQQQKRLRNMT-SHSARVGSLSWNSYI 121 (318)
T ss_dssp ETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS--------EEEEEETTTTEEEEEEE-CCSSCEEEEEEETTE
T ss_pred ECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC--------cEEEeecCCceeEEEec-CccceEEEeecCCCE
Confidence 667899998875 33467899999999888788877775 99999999999887652 344788888888777
Q ss_pred ee-eeCCCeEEEEECCCCC-EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 VL-SMDSSVVKIWSKDNGS-LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 l~-Ssdd~~IKIWD~~tGk-~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.++.+++|+..++. .+..+.+ |...+..+++.+++.+|++++.|+.|++|++..
T Consensus 122 l~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 122 LSSGSRSGHIHHHDVRVAEHHVATLSG-HSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp EEEEETTSEEEEEETTSSSCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred EEEEecCCceEeeecCCCceeEEEEcC-ccCceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence 44 5689999999998764 5566676 689999999999999999999999999999864
No 116
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.54 E-value=7.6e-14 Score=138.02 Aligned_cols=120 Identities=10% Similarity=0.166 Sum_probs=96.4
Q ss_pred EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC--ceeEEecCCCCCCeeEEEEcCC--c---ee
Q psy2083 15 TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD--KPLRVKDHMYGLPIRDIKFHDN--Y---VL 87 (248)
Q Consensus 15 ~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~--~pl~~~~h~~~~pI~sI~F~~d--~---l~ 87 (248)
..+.+| .+.|++++|+|++..+++++.|+ +|++||++++ +++... .+|..+|++++|+++ + ++
T Consensus 3 ~~l~gH-~~~V~~l~~s~dg~~latg~~dg--------~I~vwd~~~~~~~~~~~l-~~h~~~V~~l~~s~~~~~~~l~s 72 (753)
T 3jro_A 3 VIANAH-NELIHDAVLDYYGKRLATCSSDK--------TIKIFEVEGETHKLIDTL-TGHEGPVWRVDWAHPKFGTILAS 72 (753)
T ss_dssp -----C-CCCEEEECCCSSSCCEEEEETTT--------EEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCTTSCSEEEE
T ss_pred eecccC-cceeEEEEECCCCCeEEEEECCC--------cEEEEecCCCCCccceec-cCCcCceEEEEecCCCCCCEEEE
Confidence 345555 79999999999888888887775 9999999854 444443 344589999999876 5 44
Q ss_pred eeCCCeEEEEECCCCC--EEEEeecCCCCCeeEEEEeCC--CCEEEEEeCCCeEEEEEcCCC
Q psy2083 88 SMDSSVVKIWSKDNGS--LFTCIESGDQTQFNNLCHIPE--SGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk--~~~tie~~h~~~In~l~~~pd--sgll~sa~ed~~I~~w~Ip~l 145 (248)
++.|++|++||.++++ ....+.+ |..+|++++|+|+ +.++++|+.|++|++|++..-
T Consensus 73 ~s~Dg~I~vwd~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 73 CSYDGKVLIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred EeCCCeEEEEECCCCcccccccccC-CCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 5689999999999987 6677777 6899999999999 999999999999999998664
No 117
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.54 E-value=1.8e-13 Score=125.06 Aligned_cols=127 Identities=13% Similarity=0.237 Sum_probs=102.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec--CCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD--HMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~--h~~~~pI~sI~F~~ 83 (248)
.|..+|+++.++.++ ...+..+.+. +..+++++.|+ +|++||+++++++.... ..|..+|++++|++
T Consensus 304 ~d~~~~~~~~~~~~~-~~~v~~~~~~--~~~l~~~~~dg--------~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 372 (445)
T 2ovr_B 304 WDVETGNCIHTLTGH-QSLTSGMELK--DNILVSGNADS--------TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK 372 (445)
T ss_dssp EETTTCCEEEEECCC-CSCEEEEEEE--TTEEEEEETTS--------CEEEEETTTCCEEEEECSTTSCSSCEEEEEECS
T ss_pred EECCCCCEEEEEcCC-cccEEEEEEe--CCEEEEEeCCC--------eEEEEECCCCcEEEEEccCCCCCCCEEEEEECC
Confidence 466788888888776 5666666553 44566666664 99999999999887753 13558999999987
Q ss_pred Cc-eeeeCCCeEEEEECCCCCEEEEee-----cCCCCCeeEEEEeCCCCEEEEEeCCCe----EEEEEcCC
Q psy2083 84 NY-VLSMDSSVVKIWSKDNGSLFTCIE-----SGDQTQFNNLCHIPESGMMFIANENKK----ILTYYIPS 144 (248)
Q Consensus 84 d~-l~Ssdd~~IKIWD~~tGk~~~tie-----~~h~~~In~l~~~pdsgll~sa~ed~~----I~~w~Ip~ 144 (248)
+. ++++.|+.|+|||..+|+.+..+. + |...|++++|+|++.++++|+.|++ |.+|++..
T Consensus 373 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 373 NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGG-SGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEEECTTGG-GTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CEEEEEeCCCeEEEEECCCCceeeeeeccccCC-CCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 76 555789999999999999999883 3 4789999999999999999999997 99998753
No 118
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.54 E-value=3.3e-13 Score=123.31 Aligned_cols=124 Identities=5% Similarity=0.108 Sum_probs=103.1
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+|+++.++.+| .+.|.++++. +..+++++.|+ +|++||+.+++++.... +|..+|.++.|+++.
T Consensus 144 wd~~~~~~~~~~~~h-~~~v~~~~~~--~~~l~s~~~dg--------~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~ 211 (445)
T 2ovr_B 144 WSAVTGKCLRTLVGH-TGGVWSSQMR--DNIIISGSTDR--------TLKVWNAETGECIHTLY-GHTSTVRCMHLHEKR 211 (445)
T ss_dssp EETTTCCEEEECCCC-SSCEEEEEEE--TTEEEEEETTS--------CEEEEETTTTEEEEEEC-CCSSCEEEEEEETTE
T ss_pred EECCCCcEEEEEcCC-CCCEEEEEec--CCEEEEEeCCC--------eEEEEECCcCcEEEEEC-CCCCcEEEEEecCCE
Confidence 456688888888876 7889998887 34676776664 99999999998877653 345899999998877
Q ss_pred -eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.|++|++||.++++++..+.+ |..+|+++++ ++..+++|+.|+.|.+|++..
T Consensus 212 l~s~s~dg~i~~wd~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~ 268 (445)
T 2ovr_B 212 VVSGSRDATLRVWDIETGQCLHVLMG-HVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 268 (445)
T ss_dssp EEEEETTSEEEEEESSSCCEEEEEEC-CSSCEEEEEE--CSSCEEEEETTSCEEEEEGGG
T ss_pred EEEEeCCCEEEEEECCCCcEEEEEcC-CcccEEEEEE--CCCEEEEEcCCCEEEEEECCC
Confidence 5567899999999999999999998 6899998888 788999999999999999754
No 119
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.54 E-value=5.2e-13 Score=121.79 Aligned_cols=128 Identities=9% Similarity=0.165 Sum_probs=106.5
Q ss_pred chhcCceeEEEec-CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~-~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
|..+|++...+.. +|...|++++|+|++.++++|+.|+ +|+|||+++++++.... +|...|.++.+++..
T Consensus 131 d~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg--------~v~iWd~~~~~~~~~~~-~h~~~v~~~s~~~~~ 201 (420)
T 4gga_A 131 SASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA--------EVQLWDVQQQKRLRNMT-SHSARVGSLSWNSYI 201 (420)
T ss_dssp ETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTEEEEEEC-CCSSCEEEEEEETTE
T ss_pred ECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC--------eEEEEEcCCCcEEEEEe-CCCCceEEEeeCCCE
Confidence 5678998887753 3467899999999888787877774 99999999998887652 445899999998777
Q ss_pred ee-eeCCCeEEEEECCCC-CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 VL-SMDSSVVKIWSKDNG-SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 l~-Ssdd~~IKIWD~~tG-k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++ ++.|+.+++||.... ..+.++.+ |...+..++++|++.++++++.|+.|.+|++..
T Consensus 202 l~sgs~d~~i~~~d~~~~~~~~~~~~~-h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~ 261 (420)
T 4gga_A 202 LSSGSRSGHIHHHDVRVAEHHVATLSG-HSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 261 (420)
T ss_dssp EEEEETTSEEEEEETTSSSCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred EEEEeCCCceeEeeecccceeeEEecc-cccceeeeeecCCCCeeeeeeccccceEEeecc
Confidence 44 568999999998874 45677787 699999999999999999999999999999754
No 120
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.53 E-value=2.5e-13 Score=124.23 Aligned_cols=124 Identities=7% Similarity=0.151 Sum_probs=101.7
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
.|..+|++...+.+| .+.|.++++ ++..+++++.|+ +|++||+++++++.... .|..+|.++.|+++.
T Consensus 158 wd~~~~~~~~~~~~h-~~~v~~l~~--~~~~l~sg~~dg--------~i~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~ 225 (435)
T 1p22_A 158 WDKNTLECKRILTGH-TGSVLCLQY--DERVIITGSSDS--------TVRVWDVNTGEMLNTLI-HHCEAVLHLRFNNGM 225 (435)
T ss_dssp EESSSCCEEEEECCC-SSCEEEEEC--CSSEEEEEETTS--------CEEEEESSSCCEEEEEC-CCCSCEEEEECCTTE
T ss_pred EeCCCCeEEEEEcCC-CCcEEEEEE--CCCEEEEEcCCC--------eEEEEECCCCcEEEEEc-CCCCcEEEEEEcCCE
Confidence 456678888888876 688888887 456677776664 99999999998877653 345899999999877
Q ss_pred -eeeeCCCeEEEEECCCCCEE---EEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 -VLSMDSSVVKIWSKDNGSLF---TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 -l~Ssdd~~IKIWD~~tGk~~---~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++++.|+.|++||.++++.. ..+.+ |...|+++++ ++.+|++|+.|++|++|++..
T Consensus 226 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~ 285 (435)
T 1p22_A 226 MVTCSKDRSIAVWDMASPTDITLRRVLVG-HRAAVNVVDF--DDKYIVSASGDRTIKVWNTST 285 (435)
T ss_dssp EEEEETTSCEEEEECSSSSCCEEEEEECC-CSSCEEEEEE--ETTEEEEEETTSEEEEEETTT
T ss_pred EEEeeCCCcEEEEeCCCCCCceeeeEecC-CCCcEEEEEe--CCCEEEEEeCCCeEEEEECCc
Confidence 55678999999999998766 55666 6899999988 788999999999999999865
No 121
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.52 E-value=2.4e-13 Score=132.48 Aligned_cols=120 Identities=11% Similarity=0.150 Sum_probs=95.1
Q ss_pred eeEEEecCCC----CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce-------eEEe---cCCCCCCeeE
Q psy2083 13 LFTCIESGDQ----TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP-------LRVK---DHMYGLPIRD 78 (248)
Q Consensus 13 ~~~~~~~~~~----~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p-------l~~~---~h~~~~pI~s 78 (248)
+++.++ |+. ..|.+++|+||+..|++|+.|+ +|+|||+++++. +.+. ..+|..+|.+
T Consensus 117 ~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DG--------tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~s 187 (588)
T 2j04_A 117 MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDG--------ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTH 187 (588)
T ss_dssp EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTS--------EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEE
T ss_pred eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCC--------EEEEEECCCCccccccceeeeeeecccccccccEEE
Confidence 555566 532 2599999999999899988885 999999999852 3442 1334579999
Q ss_pred EEEcCCc-eeeeCCCeEEEEECCCCCE---EEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 79 IKFHDNY-VLSMDSSVVKIWSKDNGSL---FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 79 I~F~~d~-l~Ssdd~~IKIWD~~tGk~---~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|+|+|++ ++++.|++||+||..+++. ..++.++|...|.+++|+ |+.|++++ +++|++|++..
T Consensus 188 VawSPdgLaass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~ 254 (588)
T 2j04_A 188 IVWYEDVLVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKN 254 (588)
T ss_dssp EEEETTEEEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTT
T ss_pred EEEcCCcEEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCC
Confidence 9999999 5667899999999998873 457753367899999999 68999998 69999999764
No 122
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.52 E-value=3e-13 Score=123.73 Aligned_cols=166 Identities=11% Similarity=0.215 Sum_probs=116.5
Q ss_pred chhcCcee---EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcC
Q psy2083 7 RQDKGSLF---TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHD 83 (248)
Q Consensus 7 ~~~~G~~~---~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~ 83 (248)
|..++... ..+.+| .+.|+.+.+ ++..+++++.|+ +|++||+++++++.... .|..+|.++.|++
T Consensus 239 d~~~~~~~~~~~~~~~~-~~~v~~~~~--~~~~l~s~~~dg--------~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~ 306 (435)
T 1p22_A 239 DMASPTDITLRRVLVGH-RAAVNVVDF--DDKYIVSASGDR--------TIKVWNTSTCEFVRTLN-GHKRGIACLQYRD 306 (435)
T ss_dssp ECSSSSCCEEEEEECCC-SSCEEEEEE--ETTEEEEEETTS--------EEEEEETTTCCEEEEEE-CCSSCEEEEEEET
T ss_pred eCCCCCCceeeeEecCC-CCcEEEEEe--CCCEEEEEeCCC--------eEEEEECCcCcEEEEEc-CCCCcEEEEEeCC
Confidence 34445544 444444 688888887 456677777664 99999999998887653 3348999999987
Q ss_pred Cc-eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCC----CCCccccccch
Q psy2083 84 NY-VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGP----APKWCGFLDNL 158 (248)
Q Consensus 84 d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~----aP~wcs~ld~~ 158 (248)
+. ++++.|+.|++||.++|+++.++.+ |...|++++| ++.+|++|+.|+.|++|++..... ....| +
T Consensus 307 ~~l~~g~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~--~--- 378 (435)
T 1p22_A 307 RLVVSGSSDNTIRLWDIECGACLRVLEG-HEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLC--L--- 378 (435)
T ss_dssp TEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTE--E---
T ss_pred CEEEEEeCCCeEEEEECCCCCEEEEEeC-CcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchh--e---
Confidence 66 5557899999999999999999998 6899999888 889999999999999999754221 11001 1
Q ss_pred hhhhhccc---cccccCCceeecHhHHhhcCCccccCC
Q psy2083 159 TEELEENI---IENVYDDYKFVTRQELEDLGLGHLIGT 193 (248)
Q Consensus 159 tee~e~~~---~~~~yd~y~fvt~~~l~~l~~~~ligt 193 (248)
..+..+. ....+|+..++|-.+...+.++.+-+.
T Consensus 379 -~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 379 -RTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp -EEECCCSSCCCCEEECSSCEEECCSSSEEEEEC----
T ss_pred -eeccCCCCCeEEEEeCCCEEEEEeCCCEEEEEECCCC
Confidence 1122221 112257777888777777777766543
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.52 E-value=6e-13 Score=118.44 Aligned_cols=126 Identities=6% Similarity=0.122 Sum_probs=104.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|..+|+++..+..+ ..+..++|+|++..+++++.++ |+|++||+++++++....+. ..+.+++|+|++
T Consensus 59 ~d~~~~~~~~~~~~~--~~v~~~~~spdg~~l~~~~~~~-------~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg 127 (391)
T 1l0q_A 59 IDTATNNVIATVPAG--SSPQGVAVSPDGKQVYVTNMAS-------STLSVIDTTSNTVAGTVKTG--KSPLGLALSPDG 127 (391)
T ss_dssp EETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEETTT-------TEEEEEETTTTEEEEEEECS--SSEEEEEECTTS
T ss_pred EECCCCeEEEEEECC--CCccceEECCCCCEEEEEECCC-------CEEEEEECCCCeEEEEEeCC--CCcceEEECCCC
Confidence 567789999998876 4899999999888787776654 49999999999887776554 578999999997
Q ss_pred --e-ee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEE-EEEeCCCeEEEEEcCC
Q psy2083 86 --V-LS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMM-FIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l-~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll-~sa~ed~~I~~w~Ip~ 144 (248)
+ ++ +.++.|++||..+++.+..+.. ...+++++|+|++..| ++++.+++|.+|++..
T Consensus 128 ~~l~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~ 189 (391)
T 1l0q_A 128 KKLYVTNNGDKTVSVINTVTKAVINTVSV--GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT 189 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEEC--CSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CEEEEEeCCCCEEEEEECCCCcEEEEEec--CCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 4 44 4689999999999999999987 4677999999999887 5667889999999754
No 124
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.51 E-value=2.9e-13 Score=133.84 Aligned_cols=127 Identities=9% Similarity=0.229 Sum_probs=99.2
Q ss_pred hhcCc--eeEEEecCCCCCeeEEEEeCC--CCcEEEeecCceeeeecCCeeEEEEcCCCcee-EEecCCCCCCeeEEEEc
Q psy2083 8 QDKGS--LFTCIESGDQTQFNNLCHIPE--SGMMFIANENKKILTYYIPAFYLYDIRADKPL-RVKDHMYGLPIRDIKFH 82 (248)
Q Consensus 8 ~~~G~--~~~~~~~~~~~~V~~~~~~~~--~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl-~~~~h~~~~pI~sI~F~ 82 (248)
..+|+ ....+.+| .+.|.+++|+|+ +..+++++.|+ +|++||++++.+. ......|..+|.++.|+
T Consensus 84 ~~~~~~~~~~~~~~h-~~~V~~v~~sp~~~~~~l~sgs~dg--------~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~ 154 (753)
T 3jro_A 84 EENGRWSQIAVHAVH-SASVNSVQWAPHEYGPLLLVASSDG--------KVSVVEFKENGTTSPIIIDAHAIGVNSASWA 154 (753)
T ss_dssp EETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETTS--------EEEEEECCSSSCCCCEEEECCSSCEEEEEEC
T ss_pred CCCCcccccccccCC-CCCeEEEEECCCCCCCEEEEEeCCC--------cEEEEEeecCCCcceeEeecCCCceEEEEec
Confidence 34454 45555554 789999999998 66677776664 9999999988322 11222344899999999
Q ss_pred CC-------------c---eeeeCCCeEEEEECCCC----CEEEEeecCCCCCeeEEEEeCC---CCEEEEEeCCCeEEE
Q psy2083 83 DN-------------Y---VLSMDSSVVKIWSKDNG----SLFTCIESGDQTQFNNLCHIPE---SGMMFIANENKKILT 139 (248)
Q Consensus 83 ~d-------------~---l~Ssdd~~IKIWD~~tG----k~~~tie~~h~~~In~l~~~pd---sgll~sa~ed~~I~~ 139 (248)
|. + ++++.|++|++||.+++ .+..++.+ |..+|++++|+|+ +.+|++|+.|+.|.+
T Consensus 155 p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~-h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~i 233 (753)
T 3jro_A 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG-HSDWVRDVAWSPTVLLRSYLASVSQDRTCII 233 (753)
T ss_dssp CCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECC-CSSCEEEEEECCCCSSSEEEEEEESSSCEEE
T ss_pred CcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecC-CCCcEEEEEeccCCCCCCEEEEEecCCEEEE
Confidence 93 4 55568999999999987 56667777 6999999999999 899999999999999
Q ss_pred EEcCC
Q psy2083 140 YYIPS 144 (248)
Q Consensus 140 w~Ip~ 144 (248)
|++..
T Consensus 234 wd~~~ 238 (753)
T 3jro_A 234 WTQDN 238 (753)
T ss_dssp EEESS
T ss_pred ecCCC
Confidence 99876
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.49 E-value=8.8e-13 Score=121.65 Aligned_cols=94 Identities=5% Similarity=0.021 Sum_probs=68.7
Q ss_pred ecCCeeEEEEcCCCceeEEec--CCCCCCeeEEEEcCCc--e------------e-eeCCCeEEEEECCCCCEEEEee--
Q psy2083 49 YYIPAFYLYDIRADKPLRVKD--HMYGLPIRDIKFHDNY--V------------L-SMDSSVVKIWSKDNGSLFTCIE-- 109 (248)
Q Consensus 49 ~~~G~V~LwDlRs~~pl~~~~--h~~~~pI~sI~F~~d~--l------------~-Ssdd~~IKIWD~~tGk~~~tie-- 109 (248)
+.|++|||||+++++.+.+.. |.+...|.+++|+|++ + + ++.|++||+||..+|+.+..+.
T Consensus 200 S~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~ 279 (356)
T 2w18_A 200 TIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYC 279 (356)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEEC
T ss_pred cCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEee
Confidence 334599999999999888763 2234578888999987 3 2 2478999999999999887763
Q ss_pred --cCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 110 --SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 110 --~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.+|...+.+.++ ++.++++++.|++|++|++..
T Consensus 280 ~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~t 314 (356)
T 2w18_A 280 LPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLL 314 (356)
T ss_dssp CCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTT
T ss_pred ccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCC
Confidence 123444444444 488999999999999999864
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.47 E-value=2.1e-12 Score=116.50 Aligned_cols=127 Identities=13% Similarity=0.137 Sum_probs=102.5
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
-+|..+|+.+..+... +.+..++|+|++..++++++.+ |.|++||+++++++....+. ..+.+++|+|+
T Consensus 287 ~~d~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~-------~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~d 355 (433)
T 3bws_A 287 IYSMDKEKLIDTIGPP--GNKRHIVSGNTENKIYVSDMCC-------SKIEVYDLKEKKVQKSIPVF--DKPNTIALSPD 355 (433)
T ss_dssp EEETTTTEEEEEEEEE--ECEEEEEECSSTTEEEEEETTT-------TEEEEEETTTTEEEEEEECS--SSEEEEEECTT
T ss_pred EEECCCCcEEeeccCC--CCcceEEECCCCCEEEEEecCC-------CEEEEEECCCCcEEEEecCC--CCCCeEEEcCC
Confidence 3667778887777543 5788999999877776664443 49999999999887776654 78999999999
Q ss_pred c--ee-eeC---------------CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCC
Q psy2083 85 Y--VL-SMD---------------SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPS 144 (248)
Q Consensus 85 ~--l~-Ssd---------------d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~ 144 (248)
+ ++ ++. |+.|++||..+++.+..+.. ...+++++|+|||..|++++. |++|.+|++..
T Consensus 356 g~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 356 GKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA--GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC--CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 7 33 332 46999999999999999987 578999999999999998875 99999999764
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.47 E-value=1.1e-12 Score=118.37 Aligned_cols=133 Identities=11% Similarity=0.063 Sum_probs=105.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|..+|+.+..+..+ ..+..++++|++..+++++.......+.+|.|++||+++++++....|. ..+.+++|+|++
T Consensus 239 ~d~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~g 314 (433)
T 3bws_A 239 IDRKTKLEIRKTDKI--GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP--GNKRHIVSGNTE 314 (433)
T ss_dssp EETTTTEEEEECCCC--SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE--ECEEEEEECSST
T ss_pred EECCCCcEEEEecCC--CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC--CCcceEEECCCC
Confidence 566788888887765 5689999999888887776422111122469999999999887776655 578999999987
Q ss_pred ---eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC---------------CCeEEEEEcCC
Q psy2083 86 ---VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE---------------NKKILTYYIPS 144 (248)
Q Consensus 86 ---l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e---------------d~~I~~w~Ip~ 144 (248)
+++ +.++.|++||.++++.+..+.. ...+++++|+|+|..|++++. |+.|.+|++..
T Consensus 315 ~~l~~~~~~~~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 315 NKIYVSDMCCSKIEVYDLKEKKVQKSIPV--FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred CEEEEEecCCCEEEEEECCCCcEEEEecC--CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 344 5799999999999999988875 788999999999999998887 46999999765
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.29 E-value=1.3e-10 Score=106.85 Aligned_cols=123 Identities=7% Similarity=0.078 Sum_probs=93.6
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL- 87 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~- 87 (248)
|.....+.+| ...|.+++|+|++..++.++.++ ..++|++||++++++.....|. ..+.+++|+||+ |+
T Consensus 168 g~~~~~l~~~-~~~v~~~~~Spdg~~la~~s~~~-----~~~~i~~~d~~tg~~~~l~~~~--~~~~~~~~spdg~~la~ 239 (415)
T 2hqs_A 168 GYNQFVVHRS-PQPLMSPAWSPDGSKLAYVTFES-----GRSALVIQTLANGAVRQVASFP--RHNGAPAFSPDGSKLAF 239 (415)
T ss_dssp SCSCEEEEEE-SSCEEEEEECTTSSEEEEEECTT-----SSCEEEEEETTTCCEEEEECCS--SCEEEEEECTTSSEEEE
T ss_pred CCCCEEEeCC-CCcceeeEEcCCCCEEEEEEecC-----CCcEEEEEECCCCcEEEeecCC--CcccCEEEcCCCCEEEE
Confidence 4455565554 57899999999988888777663 1248999999999887665554 689999999998 44
Q ss_pred ee-CC--CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CC--eEEEEEcC
Q psy2083 88 SM-DS--SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NK--KILTYYIP 143 (248)
Q Consensus 88 Ss-dd--~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~--~I~~w~Ip 143 (248)
++ .+ ..|.+||..+|+. ..+.. |...+++++|+|||..|++++. ++ +|.+|++.
T Consensus 240 ~~~~~g~~~i~~~d~~~~~~-~~l~~-~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~ 299 (415)
T 2hqs_A 240 ALSKTGSLNLYVMDLASGQI-RQVTD-GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN 299 (415)
T ss_dssp EECTTSSCEEEEEETTTCCE-EECCC-CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred EEecCCCceEEEEECCCCCE-EeCcC-CCCcccceEECCCCCEEEEEECCCCCcEEEEEECC
Confidence 43 33 4599999998886 56666 4788999999999998888876 45 56666754
No 129
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.26 E-value=1.4e-10 Score=99.79 Aligned_cols=128 Identities=9% Similarity=0.064 Sum_probs=100.0
Q ss_pred cchhcCceeEEEecCCCC-CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCC----CCCeeEEE
Q psy2083 6 LRQDKGSLFTCIESGDQT-QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMY----GLPIRDIK 80 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~-~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~----~~pI~sI~ 80 (248)
+|..+|+.+..+..++.. .+..++++|++..+++++..+ +.|.+||+.+++.+....... +..+..++
T Consensus 16 ~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~-------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (337)
T 1pby_B 16 IDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS-------ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAA 88 (337)
T ss_dssp EETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT-------TEEEEEETTTCCEEEEEECCBTTEEEECTTCEE
T ss_pred EECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC-------CeEEEEECCCCCeEeeEEcCCcccccccccceE
Confidence 677789998888755222 478899999887777666553 489999999998876544321 12678999
Q ss_pred EcCCc--eeee-------------CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 81 FHDNY--VLSM-------------DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 81 F~~d~--l~Ss-------------dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
|+|++ ++.+ .++.|.+||..+++.+..+.. ...+++++|+|||..|+++ ++.|.+|++..
T Consensus 89 ~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~ 163 (337)
T 1pby_B 89 LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--PRQITMLAWARDGSKLYGL--GRDLHVMDPEA 163 (337)
T ss_dssp ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--CSSCCCEEECTTSSCEEEE--SSSEEEEETTT
T ss_pred ECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC--CCCcceeEECCCCCEEEEe--CCeEEEEECCC
Confidence 99997 4444 478999999999999888886 5678899999999988888 68899999754
No 130
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.26 E-value=2.8e-10 Score=98.77 Aligned_cols=128 Identities=7% Similarity=0.122 Sum_probs=98.0
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce-eEEecCCCCCCeeEEEEcC
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP-LRVKDHMYGLPIRDIKFHD 83 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p-l~~~~h~~~~pI~sI~F~~ 83 (248)
-+|..+|+....+..+ ...+ .++|+|++..+++++..+ +.|.+||+.+++. .....++ ..|+.+++|+|
T Consensus 24 ~~d~~~~~~~~~~~~~-~~~~-~~~~s~dg~~l~~~~~~~-------~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~s~ 93 (331)
T 3u4y_A 24 FFSTDTLEILNQITLG-YDFV-DTAITSDCSNVVVTSDFC-------QTLVQIETQLEPPKVVAIQEG-QSSMADVDITP 93 (331)
T ss_dssp EEETTTCCEEEEEECC-CCEE-EEEECSSSCEEEEEESTT-------CEEEEEECSSSSCEEEEEEEC-SSCCCCEEECT
T ss_pred EEeCcccceeeeEEcc-CCcc-eEEEcCCCCEEEEEeCCC-------CeEEEEECCCCceeEEecccC-CCCccceEECC
Confidence 3677889998888765 3556 899999888777776643 3899999999886 5444332 35666699999
Q ss_pred Cc--eeeeCCC----eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEE-eCCCe-EEEEEcCC
Q psy2083 84 NY--VLSMDSS----VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIA-NENKK-ILTYYIPS 144 (248)
Q Consensus 84 d~--l~Ssdd~----~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa-~ed~~-I~~w~Ip~ 144 (248)
++ ++++... .|.+||.++++.+..+.. ...+++++|+|||..|+++ ..++. |.+|++..
T Consensus 94 dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 94 DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp TSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred CCCEEEEecCCCCcccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEecCCCceEEEEEECC
Confidence 97 5555433 999999999999998886 5667999999999866555 55577 99999864
No 131
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.26 E-value=2.5e-10 Score=99.39 Aligned_cols=130 Identities=15% Similarity=0.061 Sum_probs=102.4
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCC--------Ce
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGL--------PI 76 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~--------pI 76 (248)
.+|..+|+.+..+..+ ..+..++++|+++.+++++..+ +.|.+||+.+++.+.......+. .+
T Consensus 73 ~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~v~~~~~-------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (353)
T 3vgz_A 73 RLDPVTLEVTQAIHND--LKPFGATINNTTQTLWFGNTVN-------SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQP 143 (353)
T ss_dssp EECTTTCCEEEEEEES--SCCCSEEEETTTTEEEEEETTT-------TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEE
T ss_pred EEcCCCCeEEEEEecC--CCcceEEECCCCCEEEEEecCC-------CEEEEEeCCCCeeEEEEecCCCccccccCCCCC
Confidence 3677889988888765 4578899999888777666653 48999999999887665432111 16
Q ss_pred eEEEEcCCc--ee-ee--CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 77 RDIKFHDNY--VL-SM--DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 77 ~sI~F~~d~--l~-Ss--dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.++.|+|++ +. ++ +++.|.+||.++++....+.. +...+++++|+|||+.+++++.++.|.+|+...
T Consensus 144 ~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~ 215 (353)
T 3vgz_A 144 RELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQN-TGKMSTGLALDSEGKRLYTTNADGELITIDTAD 215 (353)
T ss_dssp EEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECC-CCTTCCCCEEETTTTEEEEECTTSEEEEEETTT
T ss_pred ceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecC-CCCccceEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 889999997 33 33 478899999999999999884 256688999999999999999999999999654
No 132
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.25 E-value=8.4e-11 Score=109.51 Aligned_cols=115 Identities=4% Similarity=0.032 Sum_probs=85.8
Q ss_pred CCCCeeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc--e-eeeCCCeEE
Q psy2083 21 DQTQFNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY--V-LSMDSSVVK 95 (248)
Q Consensus 21 ~~~~V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~--l-~Ssdd~~IK 95 (248)
|.+.|.+++|+|+++. +++++.| |+|++||++++..+.. ..| ..+|++++|+|++ + +++.|++|+
T Consensus 148 h~~~V~~v~~~p~~~~~las~s~D--------g~v~iwD~~~~~~~~~~~~~--~~~v~~v~wspdg~~lasgs~dg~v~ 217 (434)
T 2oit_A 148 AGGMVIDMKWNPTVPSMVAVCLAD--------GSIAVLQVTETVKVCATLPS--TVAVTSVCWSPKGKQLAVGKQNGTVV 217 (434)
T ss_dssp GGGSEEEEEECSSCTTEEEEEETT--------SCEEEEEESSSEEEEEEECG--GGCEEEEEECTTSSCEEEEETTSCEE
T ss_pred CCCceEEEEECCCCCCEEEEEECC--------CeEEEEEcCCCcceeeccCC--CCceeEEEEcCCCCEEEEEcCCCcEE
Confidence 4688999999998555 5555555 4999999999865543 344 4899999999998 4 456899999
Q ss_pred EEECCCCCEEEEeecC------CCCCeeEEEEeCCCCEEEEEe-CC------CeEEEEEcCCCC
Q psy2083 96 IWSKDNGSLFTCIESG------DQTQFNNLCHIPESGMMFIAN-EN------KKILTYYIPSLG 146 (248)
Q Consensus 96 IWD~~tGk~~~tie~~------h~~~In~l~~~pdsgll~sa~-ed------~~I~~w~Ip~lG 146 (248)
+||.+ ++....+..+ |...|.+++|++++.++++.+ .+ ..+.+|+++..+
T Consensus 218 iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 218 QYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp EECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred EEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCC
Confidence 99998 7777776541 123789999999887765433 33 238999998754
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.20 E-value=1.4e-09 Score=94.66 Aligned_cols=131 Identities=9% Similarity=0.069 Sum_probs=101.3
Q ss_pred ccchhcCceeEEEecCCCC--------CeeEEEEeCCCCcEEEee-cCceeeeecCCeeEEEEcCCCceeEEec-CCCCC
Q psy2083 5 ELRQDKGSLFTCIESGDQT--------QFNNLCHIPESGMMFIAN-ENKKILTYYIPAFYLYDIRADKPLRVKD-HMYGL 74 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~--------~V~~~~~~~~~g~l~~ag-~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~~~ 74 (248)
-+|..+|+.+..+..++.. .+..++++|+++.+++++ .++ +.|.+||+++++.+.... ++ .
T Consensus 115 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-------~~i~~~d~~~~~~~~~~~~~~--~ 185 (353)
T 3vgz_A 115 AIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKE-------SVIWVVDGGNIKLKTAIQNTG--K 185 (353)
T ss_dssp EEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSS-------CEEEEEETTTTEEEEEECCCC--T
T ss_pred EEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCC-------ceEEEEcCCCCceEEEecCCC--C
Confidence 3677889988888765212 268899999888777766 332 489999999998877665 33 5
Q ss_pred CeeEEEEcCCc---eeeeCCCeEEEEECCCCCEEEEeecC---CCCCeeEEEEeCCCCEEEEEeCC-CeEEEEEcCC
Q psy2083 75 PIRDIKFHDNY---VLSMDSSVVKIWSKDNGSLFTCIESG---DQTQFNNLCHIPESGMMFIANEN-KKILTYYIPS 144 (248)
Q Consensus 75 pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~---h~~~In~l~~~pdsgll~sa~ed-~~I~~w~Ip~ 144 (248)
.+..+.|+|++ ++++.++.|.+||..+++.+..+..+ +...+++++|+|||+.+++++.+ +.|.+|++..
T Consensus 186 ~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 262 (353)
T 3vgz_A 186 MSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRN 262 (353)
T ss_dssp TCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTT
T ss_pred ccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 68999999997 44456889999999999998887641 24467889999999988877765 8999999754
No 134
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.20 E-value=7.7e-10 Score=95.18 Aligned_cols=124 Identities=7% Similarity=0.085 Sum_probs=94.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCC--------------
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHM-------------- 71 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~-------------- 71 (248)
+|..+++....+..+ ..+..++++|++..++++ ++ .|.+||+++++++......
T Consensus 120 ~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~--~~--------~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~ 187 (337)
T 1pby_B 120 YDAETLSRRKAFEAP--RQITMLAWARDGSKLYGL--GR--------DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLA 187 (337)
T ss_dssp EETTTTEEEEEEECC--SSCCCEEECTTSSCEEEE--SS--------SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCC
T ss_pred EECCCCcEEEEEeCC--CCcceeEECCCCCEEEEe--CC--------eEEEEECCCCcEeeeeeccccCCCceeCCCccE
Confidence 456677777777764 467888899988777776 22 6788888777654332111
Q ss_pred ---------------------------------------------------CCCCeeEEEEcCCc--eeeeCCCeEEEEE
Q psy2083 72 ---------------------------------------------------YGLPIRDIKFHDNY--VLSMDSSVVKIWS 98 (248)
Q Consensus 72 ---------------------------------------------------~~~pI~sI~F~~d~--l~Ssdd~~IKIWD 98 (248)
+...+.+++|+|++ +..+ ++.|.+||
T Consensus 188 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d 266 (337)
T 1pby_B 188 VWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFD 266 (337)
T ss_dssp CCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEE
T ss_pred EeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEE
Confidence 11234568999997 5555 68999999
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
..+++.+..+.. ...+.+++|+|||..|++++.++.|.+|++..
T Consensus 267 ~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 267 LEKNASIKRVPL--PHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp TTTTEEEEEEEC--SSCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred CCCCcCcceecC--CCceeeEEECCCCCEEEEEcCCCcEEEEECcC
Confidence 999999998886 56788999999999999999999999999764
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.16 E-value=1.2e-09 Score=94.89 Aligned_cols=127 Identities=11% Similarity=0.154 Sum_probs=97.2
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCe-eEEEEcCCCcee-----EEecCCCCCCeeE
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPA-FYLYDIRADKPL-----RVKDHMYGLPIRD 78 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~-V~LwDlRs~~pl-----~~~~h~~~~pI~s 78 (248)
-+|..+|+.+..+..+ .....++++|++..+++++.++ +. |.+||+.....+ ..... +.....
T Consensus 112 v~d~~~~~~~~~~~~~--~~~~~~~~spdg~~l~~~~~~~-------~~~i~~~~~~~~g~~~~~~~~~~~~--~~~~~~ 180 (331)
T 3u4y_A 112 SYSFLKNKFISTIPIP--YDAVGIAISPNGNGLILIDRSS-------ANTVRRFKIDADGVLFDTGQEFISG--GTRPFN 180 (331)
T ss_dssp EEETTTTEEEEEEECC--TTEEEEEECTTSSCEEEEEETT-------TTEEEEEEECTTCCEEEEEEEEECS--SSSEEE
T ss_pred EEECCCCCeEEEEECC--CCccceEECCCCCEEEEEecCC-------CceEEEEEECCCCcEeecCCccccC--CCCccc
Confidence 3677788888888765 4678999999888777766553 36 999999865332 11222 356799
Q ss_pred EEEcCCc---eeee-CCCeEEEEECCCCCE---EEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCC
Q psy2083 79 IKFHDNY---VLSM-DSSVVKIWSKDNGSL---FTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPS 144 (248)
Q Consensus 79 I~F~~d~---l~Ss-dd~~IKIWD~~tGk~---~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~ 144 (248)
+.|+|++ ++++ .++.|.+||.++++. +..+.. ...+.+++|+|||..|++++. ++.|.+|++..
T Consensus 181 ~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~--~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 181 ITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT--NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC--SSCCCCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred eEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC--CCCCceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 9999997 3343 688999999999998 888886 577889999999998777764 67899999754
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.16 E-value=3.6e-10 Score=97.51 Aligned_cols=119 Identities=9% Similarity=0.144 Sum_probs=89.2
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC--CCce--eEEecCCCCCCeeEEEEcCCc--e
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR--ADKP--LRVKDHMYGLPIRDIKFHDNY--V 86 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR--s~~p--l~~~~h~~~~pI~sI~F~~d~--l 86 (248)
.+..+.. ...+..++|+|++..+++++.++ |.|++||+. +++. +...... ..+..++|+|++ +
T Consensus 30 ~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~-------~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l 98 (343)
T 1ri6_A 30 LTQVVDV--PGQVQPMVVSPDKRYLYVGVRPE-------FRVLAYRIAPDDGALTFAAESALP--GSLTHISTDHQGQFV 98 (343)
T ss_dssp EEEEEEC--SSCCCCEEECTTSSEEEEEETTT-------TEEEEEEECTTTCCEEEEEEEECS--SCCSEEEECTTSSEE
T ss_pred EeeeEec--CCCCceEEECCCCCEEEEeecCC-------CeEEEEEecCCCCceeeccccccC--CCCcEEEEcCCCCEE
Confidence 3444544 36788999999888788877763 489999998 5543 3333322 378999999997 4
Q ss_pred -eee-CCCeEEEEEC---CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCC
Q psy2083 87 -LSM-DSSVVKIWSK---DNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPS 144 (248)
Q Consensus 87 -~Ss-dd~~IKIWD~---~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~ 144 (248)
+++ .++.|.+||. .+++....+.. ...+++++|+|||..|++++ .+++|.+|++..
T Consensus 99 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 99 FVGSYNAGNVSVTRLEDGLPVGVVDVVEG--LDGCHSANISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp EEEETTTTEEEEEEEETTEEEEEEEEECC--CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred EEEecCCCeEEEEECCCCccccccccccC--CCCceEEEECCCCCEEEEecCCCCEEEEEEecC
Confidence 344 4889999999 44456666665 46789999999999888888 889999999865
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.16 E-value=8.9e-10 Score=92.21 Aligned_cols=125 Identities=8% Similarity=0.079 Sum_probs=89.3
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-CceeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-DKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
+|..+|+......+ ...|.+++|+|++..+++++ ++ .|.+||+.+ +++...........|.+++|+|+
T Consensus 27 ~d~~~~~~~~~~~~--~~~v~~~~~spdg~~l~~~~-~~--------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 27 FNIRTRKMRVVWQT--PELFEAPNWSPDGKYLLLNS-EG--------LLYRLSLAGDPSPEKVDTGFATICNNDHGISPD 95 (297)
T ss_dssp EETTTTEEEEEEEE--SSCCEEEEECTTSSEEEEEE-TT--------EEEEEESSSCCSCEECCCTTCCCBCSCCEECTT
T ss_pred EeCCCCceeeeccC--CcceEeeEECCCCCEEEEEc-CC--------eEEEEeCCCCCCceEeccccccccccceEECCC
Confidence 45666776655553 47899999999887676654 43 899999999 87766553333467899999999
Q ss_pred c--eee-e--CCCeEEEE--ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEE-EEeCCCeEEEEEcCC
Q psy2083 85 Y--VLS-M--DSSVVKIW--SKDNGSLFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPS 144 (248)
Q Consensus 85 ~--l~S-s--dd~~IKIW--D~~tGk~~~tie~~h~~~In~l~~~pdsgll~-sa~ed~~I~~w~Ip~ 144 (248)
+ ++. + .++.++|| |..+++ ...+.. ...+++++|+|||..|+ +++.++.+.+|.+..
T Consensus 96 g~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~ 160 (297)
T 2ojh_A 96 GALYAISDKVEFGKSAIYLLPSTGGT-PRLMTK--NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDI 160 (297)
T ss_dssp SSEEEEEECTTTSSCEEEEEETTCCC-CEECCS--SSSEEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred CCEEEEEEeCCCCcceEEEEECCCCc-eEEeec--CCCccceEECCCCCEEEEEECCCCceEEEEEEC
Confidence 7 443 4 23445555 455555 455555 45699999999999776 788899999998753
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.15 E-value=1.4e-09 Score=104.34 Aligned_cols=127 Identities=8% Similarity=0.088 Sum_probs=101.9
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEc--CCCceeEEecCCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDI--RADKPLRVKDHMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDl--Rs~~pl~~~~h~~~~pI~sI~F~~ 83 (248)
+|..+|+++.++..++ .+..++|+|++..+++++.++ +|++||+ .+++.+....++ ..+..|+|+|
T Consensus 164 ~D~~t~~~~~~i~~g~--~~~~v~~spdg~~l~v~~~d~--------~V~v~D~~~~t~~~~~~i~~g--~~p~~va~sp 231 (543)
T 1nir_A 164 VDGDSKKIVKVIDTGY--AVHISRMSASGRYLLVIGRDA--------RIDMIDLWAKEPTKVAEIKIG--IEARSVESSK 231 (543)
T ss_dssp EETTTCCEEEEEECST--TEEEEEECTTSCEEEEEETTS--------EEEEEETTSSSCEEEEEEECC--SEEEEEEECC
T ss_pred EECCCceEEEEEecCc--ccceEEECCCCCEEEEECCCC--------eEEEEECcCCCCcEEEEEecC--CCcceEEeCC
Confidence 6788999999999663 388889999998899988875 9999999 788877766554 5679999999
Q ss_pred ----Cc--eee-e-CCCeEEEEECCCCCEEEEeecC---------C-CCCeeEEEEeCCCCE-EEEEeCCCeEEEEEcCC
Q psy2083 84 ----NY--VLS-M-DSSVVKIWSKDNGSLFTCIESG---------D-QTQFNNLCHIPESGM-MFIANENKKILTYYIPS 144 (248)
Q Consensus 84 ----d~--l~S-s-dd~~IKIWD~~tGk~~~tie~~---------h-~~~In~l~~~pdsgl-l~sa~ed~~I~~w~Ip~ 144 (248)
++ +.+ + .+++|+|||..+++++.++..+ | ...+.++.++|+++. +++..++++|.+|++..
T Consensus 232 ~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~ 311 (543)
T 1nir_A 232 FKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKD 311 (543)
T ss_dssp STTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTT
T ss_pred CcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecC
Confidence 87 443 3 5899999999999999998751 1 226889999998765 45556789999999865
No 139
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.13 E-value=1.9e-09 Score=99.14 Aligned_cols=127 Identities=12% Similarity=0.130 Sum_probs=92.1
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
.|..+|+... +..+ .+.+..++|+|++..++ +++.++ +..|.+||++++++.....|. ..+.+++|+||
T Consensus 208 ~d~~tg~~~~-l~~~-~~~~~~~~~spdg~~la~~~~~~g------~~~i~~~d~~~~~~~~l~~~~--~~~~~~~~spd 277 (415)
T 2hqs_A 208 QTLANGAVRQ-VASF-PRHNGAPAFSPDGSKLAFALSKTG------SLNLYVMDLASGQIRQVTDGR--SNNTEPTWFPD 277 (415)
T ss_dssp EETTTCCEEE-EECC-SSCEEEEEECTTSSEEEEEECTTS------SCEEEEEETTTCCEEECCCCS--SCEEEEEECTT
T ss_pred EECCCCcEEE-eecC-CCcccCEEEcCCCCEEEEEEecCC------CceEEEEECCCCCEEeCcCCC--CcccceEECCC
Confidence 4556677654 3443 46889999999887776 444332 236999999998775444444 78999999999
Q ss_pred c--ee-eeC-CC--eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC---CeEEEEEcCC
Q psy2083 85 Y--VL-SMD-SS--VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN---KKILTYYIPS 144 (248)
Q Consensus 85 ~--l~-Ssd-d~--~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed---~~I~~w~Ip~ 144 (248)
+ |+ +++ ++ .|.+||..+|+. ..+.. +...+.+++|+|||..|++++.+ .+|.+|++..
T Consensus 278 g~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~-~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~ 344 (415)
T 2hqs_A 278 SQNLAFTSDQAGRPQVYKVNINGGAP-QRITW-EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT 344 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTSSCC-EECCC-SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT
T ss_pred CCEEEEEECCCCCcEEEEEECCCCCE-EEEec-CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCC
Confidence 7 44 454 44 677889998874 34444 36788899999999999888764 5899998754
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.12 E-value=5.6e-10 Score=107.62 Aligned_cols=127 Identities=9% Similarity=0.069 Sum_probs=93.1
Q ss_pred cchhcCceeEEEecCCCC---CeeEEEEeCCCCcEEEeecCcee-eeecCCeeEEEEcCCCceeEEec-CCCCCCeeEEE
Q psy2083 6 LRQDKGSLFTCIESGDQT---QFNNLCHIPESGMMFIANENKKI-LTYYIPAFYLYDIRADKPLRVKD-HMYGLPIRDIK 80 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~---~V~~~~~~~~~g~l~~ag~d~~~-~~~~~G~V~LwDlRs~~pl~~~~-h~~~~pI~sI~ 80 (248)
.|..+|+....+.++ .. .|.+++|+||+..++.++.+..+ ..++++.|.+||+.++++..... ..+...|..++
T Consensus 42 ~d~~~g~~~~~~~~~-~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~ 120 (723)
T 1xfd_A 42 WNVETNTSTVLIEGK-KIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAG 120 (723)
T ss_dssp BCGGGCCCEEEECTT-TTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCC
T ss_pred EECCCCcEEEEeccc-cccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccE
Confidence 567788888877765 33 48999999998888877765432 23445799999999987632222 22234589999
Q ss_pred EcCCc--eeeeCCCeEEEEECCCCCEEEEeecCCCCCe------------------eEEEEeCCCCEEEEEeCC
Q psy2083 81 FHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQF------------------NNLCHIPESGMMFIANEN 134 (248)
Q Consensus 81 F~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~I------------------n~l~~~pdsgll~sa~ed 134 (248)
|+||+ |+.+.++.|.+||..+|+....... +...+ ++++|+|||..|++++.+
T Consensus 121 ~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~-~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~ 193 (723)
T 1xfd_A 121 WGPKGQQLIFIFENNIYYCAHVGKQAIRVVST-GKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIN 193 (723)
T ss_dssp BCSSTTCEEEEETTEEEEESSSSSCCEEEECC-CBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred ECCCCCEEEEEECCeEEEEECCCCceEEEecC-CCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEEC
Confidence 99998 6666668999999999887665554 13333 789999999999888754
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.11 E-value=1.6e-09 Score=93.44 Aligned_cols=124 Identities=7% Similarity=0.137 Sum_probs=88.2
Q ss_pred cCc--eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC---CCceeEEecCCCCCCeeEEEEcCC
Q psy2083 10 KGS--LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR---ADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 10 ~G~--~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR---s~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
+|+ .+..+..+ +.+..++|+|++..+++++.++ |.|.+||+. ..+++...... ..+.+++|+|+
T Consensus 71 ~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~-------~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~~s~d 139 (343)
T 1ri6_A 71 DGALTFAAESALP--GSLTHISTDHQGQFVFVGSYNA-------GNVSVTRLEDGLPVGVVDVVEGL--DGCHSANISPD 139 (343)
T ss_dssp TCCEEEEEEEECS--SCCSEEEECTTSSEEEEEETTT-------TEEEEEEEETTEEEEEEEEECCC--TTBCCCEECTT
T ss_pred CCceeeccccccC--CCCcEEEEcCCCCEEEEEecCC-------CeEEEEECCCCccccccccccCC--CCceEEEECCC
Confidence 455 44455554 3788999999888787776644 489999994 33444444332 46899999999
Q ss_pred c--ee-ee-CCCeEEEEECCC-CCEEE----EeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCC
Q psy2083 85 Y--VL-SM-DSSVVKIWSKDN-GSLFT----CIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPS 144 (248)
Q Consensus 85 ~--l~-Ss-dd~~IKIWD~~t-Gk~~~----tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~ 144 (248)
+ ++ ++ .++.|++||..+ |+... .+.......+++++|+|+|..+++++ .+++|.+|++..
T Consensus 140 g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 140 NRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp SSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred CCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 7 33 44 688999999998 76532 22321145788999999999776665 789999999864
No 142
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.10 E-value=3.3e-10 Score=107.41 Aligned_cols=124 Identities=7% Similarity=0.023 Sum_probs=93.5
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~- 85 (248)
|..+|++.+....+ . .+++|+||+..++.++.+.. ..++|.+||+.++++.....|. ..+.+++|+||+
T Consensus 138 d~~~g~~~~l~~~~--~--~~~~~spDG~~la~~~~~~~----~~~~i~~~d~~~g~~~~l~~~~--~~~~~~~~SpDG~ 207 (582)
T 3o4h_A 138 ALDGGGLRELARLP--G--FGFVSDIRGDLIAGLGFFGG----GRVSLFTSNLSSGGLRVFDSGE--GSFSSASISPGMK 207 (582)
T ss_dssp EEETTEEEEEEEES--S--CEEEEEEETTEEEEEEEEET----TEEEEEEEETTTCCCEEECCSS--CEEEEEEECTTSC
T ss_pred EccCCcEEEeecCC--C--ceEEECCCCCEEEEEEEcCC----CCeEEEEEcCCCCCceEeecCC--CccccceECCCCC
Confidence 44456554444433 2 78899998888876665521 1137999999998776555554 678999999998
Q ss_pred -eeee-CCC--eEEEEECCCCCEEEEeecCCCCCeeEEE--------EeCCCCEEEEEeCCCeEEEEEc
Q psy2083 86 -VLSM-DSS--VVKIWSKDNGSLFTCIESGDQTQFNNLC--------HIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 86 -l~Ss-dd~--~IKIWD~~tGk~~~tie~~h~~~In~l~--------~~pdsgll~sa~ed~~I~~w~I 142 (248)
|+++ .++ .|.+||.++|+.. .+.. |...+.+++ |+|||.++++++.++++++|.+
T Consensus 208 ~l~~~~~~~~~~i~~~d~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 208 VTAGLETAREARLVTVDPRDGSVE-DLEL-PSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEEEECSSCEEEEEECTTTCCEE-ECCC-SCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred EEEEccCCCeeEEEEEcCCCCcEE-EccC-CCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 5554 566 8999999999887 5555 466777777 9999999999999999999998
No 143
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.08 E-value=1.5e-09 Score=94.07 Aligned_cols=127 Identities=10% Similarity=0.168 Sum_probs=91.6
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCC-----CCCeeEEE
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMY-----GLPIRDIK 80 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~-----~~pI~sI~ 80 (248)
+|..+|+.+..+..+....+..++++|++..+++++..+ +.|.+||+.+++.+......+ +..+..++
T Consensus 26 ~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~-------~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~ 98 (349)
T 1jmx_B 26 VDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY-------GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFA 98 (349)
T ss_dssp EETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT-------TEEEEEETTTTEEEEEEESCCSTTEEEECSSCEE
T ss_pred EECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCC-------CcEEEEeCCCCcEEEEEEcccccccccccccceE
Confidence 677788988888765223678999999887676665443 489999999998776543221 23488999
Q ss_pred EcCCc--eee-eC------------CCeEEEEECCCCCE---EEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 81 FHDNY--VLS-MD------------SSVVKIWSKDNGSL---FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 81 F~~d~--l~S-sd------------d~~IKIWD~~tGk~---~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
|+|++ ++. +. ++.|.+||..+|+. +..+.. +..+.+++|+|||. +++++.+ |.+|++
T Consensus 99 ~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~-l~~~~~~--i~~~d~ 173 (349)
T 1jmx_B 99 ISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM--PRQVYLMRAADDGS-LYVAGPD--IYKMDV 173 (349)
T ss_dssp ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC--CSSCCCEEECTTSC-EEEESSS--EEEECT
T ss_pred ECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC--CCcccceeECCCCc-EEEccCc--EEEEeC
Confidence 99997 443 32 48999999998543 444544 55788999999999 6665443 888886
Q ss_pred CC
Q psy2083 143 PS 144 (248)
Q Consensus 143 p~ 144 (248)
..
T Consensus 174 ~~ 175 (349)
T 1jmx_B 174 KT 175 (349)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 144
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.07 E-value=2.7e-09 Score=102.33 Aligned_cols=128 Identities=10% Similarity=0.060 Sum_probs=99.9
Q ss_pred cch--hcCceeEEEecCCCCCeeEEEEeC----CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC-C-------
Q psy2083 6 LRQ--DKGSLFTCIESGDQTQFNNLCHIP----ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH-M------- 71 (248)
Q Consensus 6 ~~~--~~G~~~~~~~~~~~~~V~~~~~~~----~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h-~------- 71 (248)
+|. .+++++.++..+ ..+..++|+| ++..+++++..+ ++|.+||..+.+++.+... +
T Consensus 205 ~D~~~~t~~~~~~i~~g--~~p~~va~sp~~~~dg~~l~v~~~~~-------~~v~v~D~~t~~~~~~i~~~g~~~~~~~ 275 (543)
T 1nir_A 205 IDLWAKEPTKVAEIKIG--IEARSVESSKFKGYEDRYTIAGAYWP-------PQFAIMDGETLEPKQIVSTRGMTVDTQT 275 (543)
T ss_dssp EETTSSSCEEEEEEECC--SEEEEEEECCSTTCTTTEEEEEEEES-------SEEEEEETTTCCEEEEEECCEECSSSCC
T ss_pred EECcCCCCcEEEEEecC--CCcceEEeCCCcCCCCCEEEEEEccC-------CeEEEEeccccccceeecccCcccCccc
Confidence 455 689999998865 5789999999 888888887643 4999999999998876532 1
Q ss_pred --CCCCeeEEEEcCCc---eee-eCCCeEEEEECCCCCEEE--EeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEc
Q psy2083 72 --YGLPIRDIKFHDNY---VLS-MDSSVVKIWSKDNGSLFT--CIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYI 142 (248)
Q Consensus 72 --~~~pI~sI~F~~d~---l~S-sdd~~IKIWD~~tGk~~~--tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~I 142 (248)
.+..+.+|.|++++ +++ .+++.|.+||..+++.+. ++.. ...+.+++|+|||.++++++ .+++|.+|+.
T Consensus 276 ~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~--~~~~~~~~~spdg~~l~va~~~~~~v~v~D~ 353 (543)
T 1nir_A 276 YHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGA--APFLHDGGWDSSHRYFMTAANNSNKVAVIDS 353 (543)
T ss_dssp EESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEEC--CSSCCCEEECTTSCEEEEEEGGGTEEEEEET
T ss_pred cccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEecc--CcCccCceECCCCCEEEEEecCCCeEEEEEC
Confidence 12368899999975 444 478999999999877655 5654 56788999999999877665 5789999996
Q ss_pred CC
Q psy2083 143 PS 144 (248)
Q Consensus 143 p~ 144 (248)
..
T Consensus 354 ~t 355 (543)
T 1nir_A 354 KD 355 (543)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 145
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.02 E-value=1.6e-09 Score=90.70 Aligned_cols=92 Identities=16% Similarity=0.086 Sum_probs=74.4
Q ss_pred CCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCCCE
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPESGM 127 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pdsgl 127 (248)
+++|++||+.++++.....|. .+|.+++|+|++ ++++.++.|.+||..+ ++.......++...+++++|+|||..
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~--~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 98 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTP--ELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGAL 98 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEES--SCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSE
T ss_pred ceeEEEEeCCCCceeeeccCC--cceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCCE
Confidence 469999999999877666665 789999999998 6666788999999999 88877666522468899999999999
Q ss_pred EEEEe--CCCeEEEEEcCC
Q psy2083 128 MFIAN--ENKKILTYYIPS 144 (248)
Q Consensus 128 l~sa~--ed~~I~~w~Ip~ 144 (248)
|++++ .++.+.+|.+..
T Consensus 99 l~~~~~~~~~~~~l~~~~~ 117 (297)
T 2ojh_A 99 YAISDKVEFGKSAIYLLPS 117 (297)
T ss_dssp EEEEECTTTSSCEEEEEET
T ss_pred EEEEEeCCCCcceEEEEEC
Confidence 99999 445666666543
No 146
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.01 E-value=2e-09 Score=104.27 Aligned_cols=99 Identities=12% Similarity=0.165 Sum_probs=76.7
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC---ceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEEC
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD---KPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSK 99 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~---~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~ 99 (248)
|..++|+||+..+++++. + +|.+||+.++ .+.....|. ..+.+++|+||+ |+.+.++.|.+||.
T Consensus 111 v~~~~~SpDg~~l~~~~~-~--------~i~~~d~~~~~~~~~~~l~~~~--~~~~~~~~SPDG~~la~~~~~~i~~~d~ 179 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-G--------ELYLYDLKQEGKAAVRQLTHGE--GFATDAKLSPKGGFVSFIRGRNLWVIDL 179 (741)
T ss_dssp SCCCEECTTSSEEEEEET-T--------EEEEEESSSCSTTSCCBCCCSS--SCEEEEEECTTSSEEEEEETTEEEEEET
T ss_pred cceeEECCCCCEEEEEeC-C--------cEEEEECCCCCcceEEEcccCC--cccccccCCCCCCEEEEEeCCcEEEEec
Confidence 788999998887777765 3 8999999988 554444443 789999999998 66666779999999
Q ss_pred CCCCEEEEeecCCCCC----------------eeEEEEeCCCCEEEEEeCCC
Q psy2083 100 DNGSLFTCIESGDQTQ----------------FNNLCHIPESGMMFIANENK 135 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~----------------In~l~~~pdsgll~sa~ed~ 135 (248)
.+|+....... +... +++++|+|||..|++++.|+
T Consensus 180 ~~g~~~~~~~~-~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 180 ASGRQMQLTAD-GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp TTTEEEECCCC-CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred CCCCEEEeccC-CccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 98876654443 1222 47899999999999887664
No 147
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.98 E-value=3.5e-09 Score=91.73 Aligned_cols=108 Identities=6% Similarity=-0.017 Sum_probs=80.1
Q ss_pred EEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eee-eCCCeEEEEECCCCCE
Q psy2083 29 CHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLS-MDSSVVKIWSKDNGSL 104 (248)
Q Consensus 29 ~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~S-sdd~~IKIWD~~tGk~ 104 (248)
++.+++..+++++.+ ++|.+||+.+++.+..........+..++|+|++ +++ ..++.|.+||..+|+.
T Consensus 6 ~~~~~~~~~v~~~~~--------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 6 ALKAGHEYMIVTNYP--------NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN 77 (349)
T ss_dssp CCCTTCEEEEEEETT--------TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred cccCCCEEEEEeCCC--------CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE
Confidence 344444334455555 3999999999988776554422357899999997 334 3688999999999999
Q ss_pred EEEeecCC-----CCCeeEEEEeCCCCEEEEEeCC------------CeEEEEEcCC
Q psy2083 105 FTCIESGD-----QTQFNNLCHIPESGMMFIANEN------------KKILTYYIPS 144 (248)
Q Consensus 105 ~~tie~~h-----~~~In~l~~~pdsgll~sa~ed------------~~I~~w~Ip~ 144 (248)
...+..++ ...+++++|+|||..|++++.+ +.|.+|++..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 134 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD 134 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG
T ss_pred EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCC
Confidence 88887521 1237899999999999999865 8999999764
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.98 E-value=1.6e-09 Score=104.55 Aligned_cols=97 Identities=10% Similarity=0.046 Sum_probs=76.3
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKD 100 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~ 100 (248)
..|.+++|+|+ +.++.+.+ + +|++||+.++++.....+. ..+.+++|+||+ |+.+.++.|.+||..
T Consensus 82 ~~v~~~~~spd-~~~~~~~~-~--------~i~~~d~~~~~~~~l~~~~--~~~~~~~~SpdG~~la~~~~~~i~v~~~~ 149 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFTQ-G--------GLVGFDMLARKVTYLFDTN--EETASLDFSPVGDRVAYVRNHNLYIARGG 149 (706)
T ss_dssp CCCEEEEETTT-TEEEEEET-T--------EEEEEETTTTEEEEEECCT--TCCTTCEECTTSSEEEEEETTEEEEEECB
T ss_pred cCceeEEECCC-CeEEEEEC-C--------EEEEEECCCCceEEccCCc--ccccCCcCCCCCCEEEEEECCeEEEEecC
Confidence 46899999998 66655543 3 8999999998876665554 679999999998 666788999999999
Q ss_pred C-----CCEEEEeecCCCCC--------------eeEEEEeCCCCEEEEEe
Q psy2083 101 N-----GSLFTCIESGDQTQ--------------FNNLCHIPESGMMFIAN 132 (248)
Q Consensus 101 t-----Gk~~~tie~~h~~~--------------In~l~~~pdsgll~sa~ 132 (248)
+ |+.......+ ... +++++|+|||..|++++
T Consensus 150 ~~~~~~g~~~~~~~~~-~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~ 199 (706)
T 2z3z_A 150 KLGEGMSRAIAVTIDG-TETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYR 199 (706)
T ss_dssp CTTSCCCCCEESCSCC-BTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEE
T ss_pred cccccCCCcEEeccCC-CCCeEcccchhhhhcCCCceEEECCCCCEEEEEE
Confidence 8 8876544431 222 48999999999999987
No 149
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.98 E-value=1.7e-09 Score=104.74 Aligned_cols=126 Identities=14% Similarity=0.267 Sum_probs=85.8
Q ss_pred cchhcCceeEEEecCCCC---CeeEEEEeCCCCcEEEeecCcee-eeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEE
Q psy2083 6 LRQDKGSLFTCIESGDQT---QFNNLCHIPESGMMFIANENKKI-LTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKF 81 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~---~V~~~~~~~~~g~l~~ag~d~~~-~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F 81 (248)
.|..+|+....+.++ .. .|.++.|+||+..++.++...+. -.+.+++|++||+.+++++..... ...+.+++|
T Consensus 41 ~~~~~g~~~~~~~~~-~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l--~~~~~~~~~ 117 (719)
T 1z68_A 41 YNIETGQSYTILSNR-TMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL--PRPIQYLCW 117 (719)
T ss_dssp EESSSCCEEEEECHH-HHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC--CSSBCCEEE
T ss_pred EEcCCCcEEEEEccc-cccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec--CcccccceE
Confidence 455677776666653 11 38899999998877776652110 011235999999999876321111 146899999
Q ss_pred cCCc--eeeeCCCeEEEEECCCCCEEEEeecCCCCCe-----------------eEEEEeCCCCEEEEEeCC
Q psy2083 82 HDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQF-----------------NNLCHIPESGMMFIANEN 134 (248)
Q Consensus 82 ~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~I-----------------n~l~~~pdsgll~sa~ed 134 (248)
+||+ |+.+.++.|++||..+|+.......++...| .+++|+|||..|++++.|
T Consensus 118 SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 118 SPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp CSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred CCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 9998 7777788999999999887543322112212 589999999999988755
No 150
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.98 E-value=4.4e-09 Score=101.82 Aligned_cols=117 Identities=9% Similarity=0.107 Sum_probs=87.7
Q ss_pred CCeeEEEEeCCCCcEEEeec-CceeeeecCCeeEEEEcCCCceeEEec-CCCC----------------------CCeeE
Q psy2083 23 TQFNNLCHIPESGMMFIANE-NKKILTYYIPAFYLYDIRADKPLRVKD-HMYG----------------------LPIRD 78 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~-d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~~----------------------~pI~s 78 (248)
..|..++|+||+..+++++. ++. ....+|.+||+.++++..... +... ..|.+
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~---~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSD---RNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSC---TTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCC
T ss_pred CCCCCceEecCCCEEEEEeccCCC---CcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence 46889999999888887776 420 000189999999998765543 2222 23899
Q ss_pred EEEcCCc--eeeeCCCeEEEEECCCCC--EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 79 IKFHDNY--VLSMDSSVVKIWSKDNGS--LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 79 I~F~~d~--l~Ssdd~~IKIWD~~tGk--~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++|+||+ |+.+.++.|.+||..+|+ ....+.. |...+++++|+|||..|+.+++ ++|.+|++..
T Consensus 114 ~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~-~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~ 181 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTH-GEGFATDAKLSPKGGFVSFIRG-RNLWVIDLAS 181 (741)
T ss_dssp CEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCC-SSSCEEEEEECTTSSEEEEEET-TEEEEEETTT
T ss_pred eEECCCCCEEEEEeCCcEEEEECCCCCcceEEEccc-CCcccccccCCCCCCEEEEEeC-CcEEEEecCC
Confidence 9999998 666556999999999882 3445555 4688999999999999998885 5899999754
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.96 E-value=2.1e-08 Score=87.95 Aligned_cols=130 Identities=15% Similarity=0.143 Sum_probs=86.2
Q ss_pred chhcCc--eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-C--ceeEEecCC--------CC
Q psy2083 7 RQDKGS--LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-D--KPLRVKDHM--------YG 73 (248)
Q Consensus 7 ~~~~G~--~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~--~pl~~~~h~--------~~ 73 (248)
+..+|. .+..+..+ ...+..++++|++..+++++..+ |+|.+||+.. + +++....+. ..
T Consensus 69 ~~~~g~~~~~~~~~~~-~~~p~~~a~spdg~~l~~~~~~~-------~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~ 140 (347)
T 3hfq_A 69 QIDGQTAHKLNTVVAP-GTPPAYVAVDEARQLVYSANYHK-------GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDG 140 (347)
T ss_dssp EEETTEEEEEEEEEEE-SCCCSEEEEETTTTEEEEEETTT-------TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSS
T ss_pred EecCCcEEEeeeeecC-CCCCEEEEECCCCCEEEEEeCCC-------CEEEEEEeCCCCCeeecceeecCCCCCCccccC
Confidence 343444 44443333 35788999999888888887543 4899999963 3 333333222 11
Q ss_pred CCeeEEEEcCCc-ee-e-eCCCeEEEEECC-CCCEEE--EeecCCCCCeeEEEEeCCCCEEEEE-eCCCeEEEEEcCC
Q psy2083 74 LPIRDIKFHDNY-VL-S-MDSSVVKIWSKD-NGSLFT--CIESGDQTQFNNLCHIPESGMMFIA-NENKKILTYYIPS 144 (248)
Q Consensus 74 ~pI~sI~F~~d~-l~-S-sdd~~IKIWD~~-tGk~~~--tie~~h~~~In~l~~~pdsgll~sa-~ed~~I~~w~Ip~ 144 (248)
..+.+++|+|++ ++ + ..++.|.+||.. +|+... .+.......+++++|+|||..++++ ..++.|.+|++..
T Consensus 141 ~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 141 SHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 248899999998 33 3 357899999998 565432 2222113468899999999966665 4678999998753
No 152
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.95 E-value=7.3e-09 Score=105.58 Aligned_cols=122 Identities=10% Similarity=0.097 Sum_probs=92.7
Q ss_pred chhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc
Q psy2083 7 RQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 7 ~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~ 85 (248)
+..+++. ..+. +|...+..++|+|++..+++++.++ .|++||+.+++..... .| ..+|.+++|+||+
T Consensus 365 d~~~~~~-~~l~-~~~~~~~~~~~SpDG~~la~~~~~~--------~v~~~d~~tg~~~~~~~~~--~~~v~~~~~SpDG 432 (1045)
T 1k32_A 365 DYRTGKA-EKFE-ENLGNVFAMGVDRNGKFAVVANDRF--------EIMTVDLETGKPTVIERSR--EAMITDFTISDNS 432 (1045)
T ss_dssp ETTTCCE-EECC-CCCCSEEEEEECTTSSEEEEEETTS--------EEEEEETTTCCEEEEEECS--SSCCCCEEECTTS
T ss_pred ECCCCCc-eEec-CCccceeeeEECCCCCEEEEECCCC--------eEEEEECCCCceEEeccCC--CCCccceEECCCC
Confidence 3434443 3334 3357899999999888887777664 8999999998876654 44 3789999999998
Q ss_pred --eee-eCC----------CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 86 --VLS-MDS----------SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 86 --l~S-sdd----------~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+++ +.+ +.|++||..+|+ ...+.. |...+.+++|+|||..|++++.+.....|..
T Consensus 433 ~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~-~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 433 RFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATT-ENSHDYAPAFDADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp CEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSC-SSSBEEEEEECTTSCEEEEEESCCCCCEECS
T ss_pred CeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeC-CCcccCCceEcCCCCEEEEEecccCCcCcch
Confidence 443 332 489999999887 666666 4778899999999999999998777666654
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.95 E-value=8e-09 Score=90.67 Aligned_cols=129 Identities=12% Similarity=0.206 Sum_probs=86.9
Q ss_pred ccchhcCceeE--EEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce--eEE-ecCCCCCCeeEE
Q psy2083 5 ELRQDKGSLFT--CIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP--LRV-KDHMYGLPIRDI 79 (248)
Q Consensus 5 ~~~~~~G~~~~--~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p--l~~-~~h~~~~pI~sI 79 (248)
.+|..+|+... ..... ..+..++|+|++. +++++..+ .++.|.+||+.++.. +.. ..+ +..+..|
T Consensus 22 ~~d~~tg~~~~~~~~~~~--~~p~~~a~spdg~-l~~~~~~~-----~~~~v~~~~~~~g~~~~~~~~~~~--~~~p~~~ 91 (347)
T 3hfq_A 22 TLDTTAKTLTNDGLLAAT--QNPTYLALSAKDC-LYSVDKED-----DEGGIAAWQIDGQTAHKLNTVVAP--GTPPAYV 91 (347)
T ss_dssp EEETTTTEEEEEEEEEEC--SCCCCEEECTTCE-EEEEEEET-----TEEEEEEEEEETTEEEEEEEEEEE--SCCCSEE
T ss_pred EEcCCCCeEEEeeeeecc--CCcceEEEccCCe-EEEEEecC-----CCceEEEEEecCCcEEEeeeeecC--CCCCEEE
Confidence 46777777543 33333 5678899999776 77665521 124899999987753 332 223 3678999
Q ss_pred EEcCCc--ee-ee-CCCeEEEEECC-CCC--EEEEeecC--------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 80 KFHDNY--VL-SM-DSSVVKIWSKD-NGS--LFTCIESG--------DQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 80 ~F~~d~--l~-Ss-dd~~IKIWD~~-tGk--~~~tie~~--------h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+|+|++ ++ ++ .++.|++||.. +|+ .+..+... +...+++++|+|||.++++...+++|.+|++.
T Consensus 92 a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 92 AVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 999997 44 34 67899999996 343 33333320 01248899999999966666678899999987
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.94 E-value=3.7e-08 Score=87.02 Aligned_cols=112 Identities=13% Similarity=0.137 Sum_probs=81.2
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce--eEEec--CCCCCCeeEEEEcCCc--e-eee-C-CCe
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP--LRVKD--HMYGLPIRDIKFHDNY--V-LSM-D-SSV 93 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p--l~~~~--h~~~~pI~sI~F~~d~--l-~Ss-d-d~~ 93 (248)
..+..++|+|++..+++++..+ ++|.+||+++++. +.... ..+......++|+||+ + ++. + ++.
T Consensus 211 ~~~~~~~~spdg~~l~v~~~~~-------~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~ 283 (361)
T 3scy_A 211 SGPRHLIFNSDGKFAYLINEIG-------GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADG 283 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTT-------CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCE
T ss_pred CCCeEEEEcCCCCEEEEEcCCC-------CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCE
Confidence 5678899999887787777543 4899999997754 22221 1112346899999998 4 344 4 589
Q ss_pred EEEEECC--CCC--EEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcC
Q psy2083 94 VKIWSKD--NGS--LFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIP 143 (248)
Q Consensus 94 IKIWD~~--tGk--~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip 143 (248)
|.+||.. +|+ .+..+.. ...+++++|+|||.+|++++ .++.|.+|.+.
T Consensus 284 i~v~~~~~~~g~~~~~~~~~~--g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 284 VAIFKVDETNGTLTKVGYQLT--GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp EEEEEECTTTCCEEEEEEEEC--SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEcCCCCcEEEeeEecC--CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 9999985 566 4445554 45788999999999998888 56899998763
No 155
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.89 E-value=1.2e-08 Score=98.31 Aligned_cols=128 Identities=12% Similarity=0.135 Sum_probs=90.1
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-----CceeEEecCCCCC------
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-----DKPLRVKDHMYGL------ 74 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-----~~pl~~~~h~~~~------ 74 (248)
.|..+|+....... ...+..++|+||+..++.+ .++ .|.+||+.+ +++..........
T Consensus 106 ~d~~~~~~~~l~~~--~~~~~~~~~SpdG~~la~~-~~~--------~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~ 174 (706)
T 2z3z_A 106 FDMLARKVTYLFDT--NEETASLDFSPVGDRVAYV-RNH--------NLYIARGGKLGEGMSRAIAVTIDGTETLVYGQA 174 (706)
T ss_dssp EETTTTEEEEEECC--TTCCTTCEECTTSSEEEEE-ETT--------EEEEEECBCTTSCCCCCEESCSCCBTTEEESSC
T ss_pred EECCCCceEEccCC--cccccCCcCCCCCCEEEEE-ECC--------eEEEEecCcccccCCCcEEeccCCCCCeEcccc
Confidence 35556665554443 3678899999988777664 443 899999998 7765543222111
Q ss_pred -------CeeEEEEcCCc--eee-e---------------------------------CCCeEEEEECCCCCEEEEeec-
Q psy2083 75 -------PIRDIKFHDNY--VLS-M---------------------------------DSSVVKIWSKDNGSLFTCIES- 110 (248)
Q Consensus 75 -------pI~sI~F~~d~--l~S-s---------------------------------dd~~IKIWD~~tGk~~~tie~- 110 (248)
.+.++.|+||+ |+. + .+..|.+||..+|+......+
T Consensus 175 ~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~ 254 (706)
T 2z3z_A 175 VHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGE 254 (706)
T ss_dssp CGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCS
T ss_pred hhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCC
Confidence 15899999998 443 3 236799999999886544432
Q ss_pred CCCCCeeEEEEeCCCCEEEEEeCCC-----eEEEEEcCC
Q psy2083 111 GDQTQFNNLCHIPESGMMFIANENK-----KILTYYIPS 144 (248)
Q Consensus 111 ~h~~~In~l~~~pdsgll~sa~ed~-----~I~~w~Ip~ 144 (248)
.|...+.+++|+|||..|++++.++ +|.+|++..
T Consensus 255 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~ 293 (706)
T 2z3z_A 255 PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAET 293 (706)
T ss_dssp CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTT
T ss_pred CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCC
Confidence 2356799999999999998887665 899998754
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.87 E-value=5e-08 Score=86.19 Aligned_cols=112 Identities=10% Similarity=0.185 Sum_probs=78.7
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce------e------EEecCCCCCCeeEEEEcCCc--e-eee
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP------L------RVKDHMYGLPIRDIKFHDNY--V-LSM 89 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p------l------~~~~h~~~~pI~sI~F~~d~--l-~Ss 89 (248)
+..++|+|++..+++++..+ +.|.+||+..... + .......+.....++|+|++ + +++
T Consensus 157 ~~~~~~spdg~~l~~~~~~~-------~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 229 (361)
T 3scy_A 157 LHCVRITPDGKYLLADDLGT-------DQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLIN 229 (361)
T ss_dssp EEEEEECTTSSEEEEEETTT-------TEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred ceEEEECCCCCEEEEEeCCC-------CEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEc
Confidence 46789999887777665533 3899999886431 1 11122223567899999997 3 344
Q ss_pred -CCCeEEEEECCCCCE--EEEeec--CCCCCeeEEEEeCCCCEEEEEeCC--CeEEEEEcC
Q psy2083 90 -DSSVVKIWSKDNGSL--FTCIES--GDQTQFNNLCHIPESGMMFIANEN--KKILTYYIP 143 (248)
Q Consensus 90 -dd~~IKIWD~~tGk~--~~tie~--~h~~~In~l~~~pdsgll~sa~ed--~~I~~w~Ip 143 (248)
.++.|.+||..+|+. +..+.. .+...+++++|+|||..|++++.+ +.|.+|++.
T Consensus 230 ~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 230 EIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp TTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 588999999998754 333332 113456799999999998887765 899999985
No 157
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.85 E-value=1.1e-07 Score=84.06 Aligned_cols=130 Identities=7% Similarity=0.115 Sum_probs=96.5
Q ss_pred cchhcCceeEEEecCC---------CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCC
Q psy2083 6 LRQDKGSLFTCIESGD---------QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLP 75 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~---------~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~p 75 (248)
++ .+|+.+..+.... -.....+++.|++|.++++...+ +.|++||..+++.+... ...++..
T Consensus 171 ~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~-------~~I~~~~~~~G~~~~~~~~~~~~~~ 242 (329)
T 3fvz_A 171 FS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN-------GRIQCFKTDTKEFVREIKHASFGRN 242 (329)
T ss_dssp EC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT-------TEEEEEETTTCCEEEEECCTTTTTC
T ss_pred Ec-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC-------CEEEEEECCCCcEEEEEeccccCCC
Confidence 45 3677777775321 12378999999877777776554 48999999988877664 2344577
Q ss_pred eeEEEEcCC------c---eeeeCCCeEEEEECCCCCEEEEeec--CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 76 IRDIKFHDN------Y---VLSMDSSVVKIWSKDNGSLFTCIES--GDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 76 I~sI~F~~d------~---l~Ssdd~~IKIWD~~tGk~~~tie~--~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
+.+++|+|. + +..+.+..|++||..+|+.+.++.+ .+...+++++++|||.++++...+++|..|++.
T Consensus 243 ~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 243 VFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred cceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 889999993 2 2223456899999999999999852 135678999999999888888888999999864
No 158
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.83 E-value=4.9e-08 Score=87.34 Aligned_cols=130 Identities=13% Similarity=0.136 Sum_probs=89.6
Q ss_pred ccchhcCcee--EEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC-CCceeEEecCCCCCCeeEEEE
Q psy2083 5 ELRQDKGSLF--TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR-ADKPLRVKDHMYGLPIRDIKF 81 (248)
Q Consensus 5 ~~~~~~G~~~--~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR-s~~pl~~~~h~~~~pI~sI~F 81 (248)
++|..+|++- ..........+..++++|++..+++++.+ +|.+||+. +++......+..+.....++|
T Consensus 20 ~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~---------~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~ 90 (365)
T 1jof_A 20 QFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK---------KWSSFAVKSPTEIVHEASHPIGGHPRANDA 90 (365)
T ss_dssp EEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT---------EEEEEEEEETTEEEEEEEEECCSSGGGGCT
T ss_pred EEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc---------eEEEEEECCCCCEEEeeEeecCCCCccEEE
Confidence 4677778753 23322213467889999988778777665 69999997 776654333211123567999
Q ss_pred cCCc----eeee--------------CCCeEEEEECC-CCCEEEEeec---CCCCCeeEEEEeCCCCEEEEEeC-CCeEE
Q psy2083 82 HDNY----VLSM--------------DSSVVKIWSKD-NGSLFTCIES---GDQTQFNNLCHIPESGMMFIANE-NKKIL 138 (248)
Q Consensus 82 ~~d~----l~Ss--------------dd~~IKIWD~~-tGk~~~tie~---~h~~~In~l~~~pdsgll~sa~e-d~~I~ 138 (248)
+|++ +.++ .++.+++|+.. +|+....+.. .+...+++++|+|||..|++++. +.+|.
T Consensus 91 spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~ 170 (365)
T 1jof_A 91 DTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLW 170 (365)
T ss_dssp TSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEE
Confidence 9987 2233 57899999997 5776555441 12567899999999998888764 57999
Q ss_pred EEEcC
Q psy2083 139 TYYIP 143 (248)
Q Consensus 139 ~w~Ip 143 (248)
+|++.
T Consensus 171 ~~~~~ 175 (365)
T 1jof_A 171 THRKL 175 (365)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99985
No 159
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.83 E-value=2.3e-08 Score=101.88 Aligned_cols=109 Identities=12% Similarity=0.092 Sum_probs=86.7
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeE-EEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-eeCCCeEEEEEC
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFY-LYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSSVVKIWSK 99 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~-LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD~ 99 (248)
.+..++|+ ++..++.++.+. .+. +||+.++++..... +...+..++|+||+ |+ +++++.|++||.
T Consensus 339 ~~~~~~~s-dg~~l~~~s~~~--------~l~~~~d~~~~~~~~l~~--~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~ 407 (1045)
T 1k32_A 339 RYVRRGGD-TKVAFIHGTREG--------DFLGIYDYRTGKAEKFEE--NLGNVFAMGVDRNGKFAVVANDRFEIMTVDL 407 (1045)
T ss_dssp EEEEECSS-SEEEEEEEETTE--------EEEEEEETTTCCEEECCC--CCCSEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEeeeEc-CCCeEEEEECCC--------ceEEEEECCCCCceEecC--CccceeeeEECCCCCEEEEECCCCeEEEEEC
Confidence 67778888 766677766653 788 99999876544443 34789999999998 44 467889999999
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC----------eEEEEEcCC
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK----------KILTYYIPS 144 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~----------~I~~w~Ip~ 144 (248)
.+|+....+.+ |...+.+++|+|||..|++++.++ .|.+|++..
T Consensus 408 ~tg~~~~~~~~-~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 408 ETGKPTVIERS-REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp TTCCEEEEEEC-SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred CCCceEEeccC-CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 99998887766 588899999999999998887644 899999753
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.78 E-value=2.6e-08 Score=97.82 Aligned_cols=137 Identities=9% Similarity=0.107 Sum_probs=92.5
Q ss_pred cchhcCceeEEEecCCCC----CeeEEEEeCCCCcEEEeecCcee-eeecCCeeEEEEcCCCceeEEecCCCCCCeeEEE
Q psy2083 6 LRQDKGSLFTCIESGDQT----QFNNLCHIPESGMMFIANENKKI-LTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIK 80 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~----~V~~~~~~~~~g~l~~ag~d~~~-~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~ 80 (248)
.|..+|++...+.++... ..++..++||+..++.++.+..+ -.++.|.+.|||+.+++......|. ..+..++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~--~~~~~~~ 118 (740)
T 4a5s_A 41 FNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIP--NNTQWVT 118 (740)
T ss_dssp EETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC--TTEEEEE
T ss_pred EECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCC--CcceeeE
Confidence 567788887777765311 12347889988877777665322 1223357789999999765544443 6799999
Q ss_pred EcCCc--eeeeCCCeEEEEECCCCCEEEE-eecCCCCCe-----------------eEEEEeCCCCEEEEEeCC-CeEEE
Q psy2083 81 FHDNY--VLSMDSSVVKIWSKDNGSLFTC-IESGDQTQF-----------------NNLCHIPESGMMFIANEN-KKILT 139 (248)
Q Consensus 81 F~~d~--l~Ssdd~~IKIWD~~tGk~~~t-ie~~h~~~I-----------------n~l~~~pdsgll~sa~ed-~~I~~ 139 (248)
|+||+ |+.+.++.|.+||..+|+.... ..+ +...+ ..+.|+|||..|+.++.| +.+..
T Consensus 119 ~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g-~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~ 197 (740)
T 4a5s_A 119 WSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTG-KEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPL 197 (740)
T ss_dssp ECSSTTCEEEEETTEEEEESSTTSCCEECCSCC-BTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCE
T ss_pred ECCCCCEEEEEECCeEEEEECCCCceEEEcCCC-CccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCce
Confidence 99998 7767788999999998875432 122 12222 348999999988887644 44666
Q ss_pred EEcCCC
Q psy2083 140 YYIPSL 145 (248)
Q Consensus 140 w~Ip~l 145 (248)
|.+|..
T Consensus 198 ~~~~~~ 203 (740)
T 4a5s_A 198 IEYSFY 203 (740)
T ss_dssp EEEEEC
T ss_pred EEEEee
Confidence 666543
No 161
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.77 E-value=5.7e-09 Score=100.58 Aligned_cols=110 Identities=6% Similarity=0.086 Sum_probs=81.2
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCC---CeeEEEEcCCc--eee-eCC-----
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGL---PIRDIKFHDNY--VLS-MDS----- 91 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~---pI~sI~F~~d~--l~S-sdd----- 91 (248)
..+.++.|+||+.++++ +.+ |+|++||+.+++......+. .. .|.+++|+||+ |++ +++
T Consensus 17 ~~~~~~~~spdg~~~~~-~~d--------g~i~~~d~~~g~~~~~~~~~-~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~ 86 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQK--------GTVRLWNVETNTSTVLIEGK-KIESLRAIRYEISPDREYALFSYNVEPIYQ 86 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSS--------SCEEEBCGGGCCCEEEECTT-TTTTTTCSEEEECTTSSEEEEEESCCCCSS
T ss_pred ccccccEEcCCCcEEEE-eCC--------CCEEEEECCCCcEEEEeccc-cccccccceEEECCCCCEEEEEecCcccee
Confidence 34678889998775543 444 49999999999876665432 22 59999999998 544 343
Q ss_pred ----CeEEEEECCCCCEEEEeec--CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 92 ----SVVKIWSKDNGSLFTCIES--GDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 92 ----~~IKIWD~~tGk~~~tie~--~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+.|.+||..+|+. ..+.. +|...+++++|+|||..|+.++. ++|.+|++..
T Consensus 87 ~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~ 143 (723)
T 1xfd_A 87 HSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVG 143 (723)
T ss_dssp SCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSS
T ss_pred ecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCC
Confidence 6788999999986 34432 12345889999999999999886 7899998754
No 162
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.75 E-value=7.3e-07 Score=76.06 Aligned_cols=131 Identities=13% Similarity=0.242 Sum_probs=87.8
Q ss_pred cchhcCceeEEEec-CCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec-CCCCCCeeEEEEcC
Q psy2083 6 LRQDKGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-HMYGLPIRDIKFHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~-~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~~~pI~sI~F~~ 83 (248)
++. +|+.+..+.. .+...+..+++.|++. ++++...+ +.|++||.. ++.+.... ++.-..+..|+|++
T Consensus 147 ~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~-------~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~ 216 (286)
T 1q7f_A 147 FDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNRA-------HCVKVFNYE-GQYLRQIGGEGITNYPIGVGINS 216 (286)
T ss_dssp ECT-TSCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGGG-------TEEEEEETT-CCEEEEESCTTTSCSEEEEEECT
T ss_pred EcC-CCCEEEEeCCCCccCCcEEEEECCCCC-EEEEECCC-------CEEEEEcCC-CCEEEEEccCCccCCCcEEEECC
Confidence 443 4666776652 2235678888888654 55554432 389999984 44444442 22224678999999
Q ss_pred Cc--eee-eCCC-eEEEEECCCCCEEEEeecCC-CCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCC
Q psy2083 84 NY--VLS-MDSS-VVKIWSKDNGSLFTCIESGD-QTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPA 148 (248)
Q Consensus 84 d~--l~S-sdd~-~IKIWD~~tGk~~~tie~~h-~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~a 148 (248)
++ +++ ..++ .|.+||. +|+.+.++..+. ...+.++++.|+|.++++ +.+++|.+|.+....|.
T Consensus 217 ~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~pv 284 (286)
T 1q7f_A 217 NGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLAPV 284 (286)
T ss_dssp TCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCCCT
T ss_pred CCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccccccc
Confidence 87 333 3454 9999996 588888887521 124779999999986666 67999999998765553
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.73 E-value=1.6e-08 Score=97.78 Aligned_cols=107 Identities=14% Similarity=0.172 Sum_probs=78.3
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCC--CCeeEEEEcCCc--eee-eC---------C
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYG--LPIRDIKFHDNY--VLS-MD---------S 91 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~--~pI~sI~F~~d~--l~S-sd---------d 91 (248)
.++.|+|++. ++.++.+ |+|++||+.++++.....+... ..|.+++|+||+ |+. ++ +
T Consensus 19 ~~~~~s~dg~-~~~~~~d--------~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~ 89 (719)
T 1z68_A 19 FFPNWISGQE-YLHQSAD--------NNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYT 89 (719)
T ss_dssp CCCEESSSSE-EEEECTT--------SCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred CccEECCCCe-EEEEcCC--------CCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecc
Confidence 3678888774 4444444 4899999999987766543210 248999999998 443 34 5
Q ss_pred CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 92 SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 92 ~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+.|++||..+|+.+....- ...+++++|+|||..|+.+. +++|.+|++..
T Consensus 90 ~~i~~~d~~~g~~~~~~~l--~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~ 139 (719)
T 1z68_A 90 ATYYIYDLSNGEFVRGNEL--PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPG 139 (719)
T ss_dssp EEEEEEETTTTEECCSSCC--CSSBCCEEECSSTTCEEEEE-TTEEEEESSTT
T ss_pred eEEEEEECCCCccccceec--CcccccceECCCCCEEEEEE-CCeEEEEeCCC
Confidence 8999999999876322222 34688999999999999886 67999998753
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.73 E-value=5.8e-07 Score=80.27 Aligned_cols=115 Identities=12% Similarity=0.113 Sum_probs=79.2
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC-CCceeE--Eec-CCCCCCeeEEEEcCCc--ee-ee-CCCe
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR-ADKPLR--VKD-HMYGLPIRDIKFHDNY--VL-SM-DSSV 93 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR-s~~pl~--~~~-h~~~~pI~sI~F~~d~--l~-Ss-dd~~ 93 (248)
...+..++|+|++..+++++..+ +.|.+||+. +++... ... ..++..+..++|+|++ +. ++ .++.
T Consensus 144 ~~~~~~~~~spdG~~l~~~~~~~-------~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~ 216 (365)
T 1jof_A 144 NTGIHGMVFDPTETYLYSADLTA-------NKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNR 216 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTT-------TEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTE
T ss_pred CCcceEEEECCCCCEEEEEcCCC-------CEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCe
Confidence 36788999999887777665432 389999998 675432 221 1124668999999998 33 33 4789
Q ss_pred EEEEECC--CCCEE---EEeec---C---CCC------CeeEEE-EeCCCCEEEEEeCCC------eEEEEEcC
Q psy2083 94 VKIWSKD--NGSLF---TCIES---G---DQT------QFNNLC-HIPESGMMFIANENK------KILTYYIP 143 (248)
Q Consensus 94 IKIWD~~--tGk~~---~tie~---~---h~~------~In~l~-~~pdsgll~sa~ed~------~I~~w~Ip 143 (248)
|.+|+.+ +|+.. ..+.. + |.. .+.+++ |+|||..|++++.+. +|.+|++.
T Consensus 217 v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 217 ICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp EEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred EEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 9999765 67753 22321 0 011 488999 999999988887543 89999985
No 165
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.70 E-value=1.2e-07 Score=89.64 Aligned_cols=105 Identities=10% Similarity=0.005 Sum_probs=78.5
Q ss_pred eeEEEEeCCCCc-EEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-eeCC----CeEEE
Q psy2083 25 FNNLCHIPESGM-MFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SMDS----SVVKI 96 (248)
Q Consensus 25 V~~~~~~~~~g~-l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd----~~IKI 96 (248)
+...+++|++.. +++++.++ .+.|||+.++++.....+. . .++.|+||+ |+ ++++ ..|.+
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~~--------~~~l~d~~~g~~~~l~~~~--~--~~~~~spDG~~la~~~~~~~~~~~i~~ 179 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATED--------RVALYALDGGGLRELARLP--G--FGFVSDIRGDLIAGLGFFGGGRVSLFT 179 (582)
T ss_dssp BEEEEEEECSSCEEEEEECSS--------CEEEEEEETTEEEEEEEES--S--CEEEEEEETTEEEEEEEEETTEEEEEE
T ss_pred ceeeeeCCCCCeEEEEecCCC--------CceEEEccCCcEEEeecCC--C--ceEEECCCCCEEEEEEEcCCCCeEEEE
Confidence 445677877654 44555544 4559999998776655433 2 899999998 54 4444 78999
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC--eEEEEEcC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK--KILTYYIP 143 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~--~I~~w~Ip 143 (248)
||..+|+.. .+.. |...+++++|+|||..|+++..++ +|.+|++.
T Consensus 180 ~d~~~g~~~-~l~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~ 226 (582)
T 3o4h_A 180 SNLSSGGLR-VFDS-GEGSFSSASISPGMKVTAGLETAREARLVTVDPR 226 (582)
T ss_dssp EETTTCCCE-EECC-SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTT
T ss_pred EcCCCCCce-Eeec-CCCccccceECCCCCEEEEccCCCeeEEEEEcCC
Confidence 999988865 6665 478899999999999999888888 88888864
No 166
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.68 E-value=1.4e-06 Score=74.24 Aligned_cols=125 Identities=9% Similarity=0.056 Sum_probs=88.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC-CCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH-MYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h-~~~~pI~sI~F~~d 84 (248)
++ .+|+.+..+...+...+..+++.|++. ++.+...+ +.|.+||.. ++.+..... .....++.|+|+++
T Consensus 105 ~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~-------~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~ 174 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKV-------MRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDK 174 (286)
T ss_dssp EC-TTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTT-------TEEEEECTT-SCEEEEEECTTTCSSEEEEEECSS
T ss_pred EC-CCCcEEEEecCccCCCceEEEEeCCCC-EEEEECCC-------CEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCC
Confidence 45 467777777654345788888888664 55544332 389999964 455544432 22245899999998
Q ss_pred c--eee-eCCCeEEEEECCCCCEEEEeecC-CCCCeeEEEEeCCCCEEEEEeCCC-eEEEEE
Q psy2083 85 Y--VLS-MDSSVVKIWSKDNGSLFTCIESG-DQTQFNNLCHIPESGMMFIANENK-KILTYY 141 (248)
Q Consensus 85 ~--l~S-sdd~~IKIWD~~tGk~~~tie~~-h~~~In~l~~~pdsgll~sa~ed~-~I~~w~ 141 (248)
+ +++ +.++.|++||. +|+.+.++... +...++++++.|+|.++++...++ .|.+|+
T Consensus 175 g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~ 235 (286)
T 1q7f_A 175 QEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT 235 (286)
T ss_dssp SEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC
T ss_pred CCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEEC
Confidence 7 333 45889999998 47777777641 125788999999998888887776 999997
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.65 E-value=1.8e-07 Score=89.36 Aligned_cols=119 Identities=8% Similarity=0.060 Sum_probs=80.7
Q ss_pred CCCeeEEEEeCCCCcEEEeecCcee--eeecCCeeEEEEcCC------CceeEEe-cCCCCCCeeEEEEcCCc--ee-ee
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKI--LTYYIPAFYLYDIRA------DKPLRVK-DHMYGLPIRDIKFHDNY--VL-SM 89 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~--~~~~~G~V~LwDlRs------~~pl~~~-~h~~~~pI~sI~F~~d~--l~-Ss 89 (248)
...+..++|+||+..++.++.+..- ......+|.+||+.+ +.+.... .+. ..+..+.|+||+ |+ ++
T Consensus 129 ~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~SpDG~~la~~~ 206 (662)
T 3azo_A 129 GLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAH--RFVTGPRLSPDGRQAVWLA 206 (662)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCS--SEECCCEECTTSSEEEEEE
T ss_pred CccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCC--CcccCceECCCCCEEEEEE
Confidence 4567899999998888877655100 000113899999998 6554433 332 578889999998 44 34
Q ss_pred -CC-------CeEEEEECC-CCC--EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 90 -DS-------SVVKIWSKD-NGS--LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 90 -dd-------~~IKIWD~~-tGk--~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+. ..|.+||.. +|+ ....+..++...+.+++|+|||.++++++.++...+|-+
T Consensus 207 ~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~ 270 (662)
T 3azo_A 207 WDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRV 270 (662)
T ss_dssp ECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEE
T ss_pred CCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEE
Confidence 32 479999999 572 333444323678999999999998888888884444443
No 168
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.58 E-value=8.3e-07 Score=82.51 Aligned_cols=102 Identities=10% Similarity=0.158 Sum_probs=77.4
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-eeeeCCCeEEEEECC
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VLSMDSSVVKIWSKD 100 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~Ssdd~~IKIWD~~ 100 (248)
.+ |+.++| ++.+|+++ .+ |.|++||+++-..... .+.+..+|.++.+.+.. ++...|+.|.+||..
T Consensus 88 p~-V~~l~f--d~~~L~v~-~~--------~~l~v~dv~sl~~~~~-~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~ 154 (388)
T 1xip_A 88 PD-VIFVCF--HGDQVLVS-TR--------NALYSLDLEELSEFRT-VTSFEKPVFQLKNVNNTLVILNSVNDLSALDLR 154 (388)
T ss_dssp TT-EEEEEE--ETTEEEEE-ES--------SEEEEEESSSTTCEEE-EEECSSCEEEEEECSSEEEEEETTSEEEEEETT
T ss_pred CC-eeEEEE--CCCEEEEE-cC--------CcEEEEEchhhhccCc-cceeecceeeEEecCCCEEEEECCCCEEEEEcc
Confidence 35 888888 56666665 44 3899999998653222 12334789999988766 555789999999999
Q ss_pred CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 101 NGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 101 tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++.... + ...|+++||+|+| +++|..|+++.+|..+
T Consensus 155 ~~~~~~-~----~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~ 190 (388)
T 1xip_A 155 TKSTKQ-L----AQNVTSFDVTNSQ--LAVLLKDRSFQSFAWR 190 (388)
T ss_dssp TCCEEE-E----EESEEEEEECSSE--EEEEETTSCEEEEEEE
T ss_pred CCcccc-c----cCCceEEEEcCCc--eEEEEcCCcEEEEcCC
Confidence 888753 2 3579999999999 6789999999999654
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.55 E-value=3.5e-06 Score=74.32 Aligned_cols=130 Identities=12% Similarity=0.111 Sum_probs=89.0
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc-eeEEecC--------CCCCC
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK-PLRVKDH--------MYGLP 75 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~-pl~~~~h--------~~~~p 75 (248)
.+|..+|+++..+..++-.....+++.|++. ++++...+ +.|++||..... .+..... .+-..
T Consensus 73 ~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~-l~v~d~~~-------~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~ 144 (329)
T 3fvz_A 73 VIDPNNAEILQSSGKNLFYLPHGLSIDTDGN-YWVTDVAL-------HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQ 144 (329)
T ss_dssp EECTTTCCEEEEECTTTCSSEEEEEECTTSC-EEEEETTT-------TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSS
T ss_pred EEECCCCeEEeccCCCccCCceEEEECCCCC-EEEEECCC-------CEEEEEeCCCCeEEEEEecccCCCCCCccccCC
Confidence 4677789988887755456788999998666 55444432 389999986542 4554421 11235
Q ss_pred eeEEEEcC-Cc--eee-e-CCCeEEEEECCCCCEEEEeecC---------CCCCeeEEEEeCC-CCEEEEEeCCCeEEEE
Q psy2083 76 IRDIKFHD-NY--VLS-M-DSSVVKIWSKDNGSLFTCIESG---------DQTQFNNLCHIPE-SGMMFIANENKKILTY 140 (248)
Q Consensus 76 I~sI~F~~-d~--l~S-s-dd~~IKIWD~~tGk~~~tie~~---------h~~~In~l~~~pd-sgll~sa~ed~~I~~w 140 (248)
.+.|+|+| ++ +++ + .++.|++|| .+|+.+..+... +-..++++++.|+ +.++++...+++|.+|
T Consensus 145 P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~ 223 (329)
T 3fvz_A 145 PTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCF 223 (329)
T ss_dssp EEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEE
Confidence 78999999 55 333 3 478999999 568888887531 0123889999999 5555555677899999
Q ss_pred EcC
Q psy2083 141 YIP 143 (248)
Q Consensus 141 ~Ip 143 (248)
+..
T Consensus 224 ~~~ 226 (329)
T 3fvz_A 224 KTD 226 (329)
T ss_dssp ETT
T ss_pred ECC
Confidence 864
No 170
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.49 E-value=5.2e-06 Score=71.33 Aligned_cols=102 Identities=15% Similarity=0.236 Sum_probs=73.6
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC-CCce---eEEecCCCCCCeeEEEEcCCc-eeeeCCCeEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR-ADKP---LRVKDHMYGLPIRDIKFHDNY-VLSMDSSVVKI 96 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR-s~~p---l~~~~h~~~~pI~sI~F~~d~-l~Ssdd~~IKI 96 (248)
....+.++++|++..+ .+...+ +.|.+||+. .++. .... ......+..|+|++++ +..+.++.|.+
T Consensus 171 ~~~~~gi~~s~dg~~l-v~~~~~-------~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~~~~v~~ 241 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNLL-VSDTGD-------NATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASAGDGVHV 241 (296)
T ss_dssp CSSEEEEEECTTSCEE-EEETTT-------TEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEETTEEEE
T ss_pred CCCCccEEECCCCCEE-EEeCCC-------CeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEcCCeEEE
Confidence 3567899999987767 443332 389999997 4443 2223 2223456789999998 33333889999
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEE-eCCCCEEEEEeCCC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCH-IPESGMMFIANENK 135 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~-~pdsgll~sa~ed~ 135 (248)
||.+ |+.+..+.. +.. +++++| .||++.|++++.++
T Consensus 242 ~~~~-g~~~~~~~~-~~~-~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 242 LTPD-GDELGRVLT-PQT-TSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp ECTT-SCEEEEEEC-SSC-CCEEEEESTTSCEEEEEETTE
T ss_pred ECCC-CCEEEEEEC-CCC-ceeEEEECCCCCEEEEEcCCe
Confidence 9997 899988886 244 999999 58999999998764
No 171
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.47 E-value=7.4e-07 Score=87.44 Aligned_cols=109 Identities=11% Similarity=0.177 Sum_probs=78.4
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCC-CC--CeeEEEEcCCc--ee-eeCC----
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMY-GL--PIRDIKFHDNY--VL-SMDS---- 91 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~-~~--pI~sI~F~~d~--l~-Ssdd---- 91 (248)
....++.|+|++.++++ + ++ +|++||+.++++.... .|.. .. ..+++.|+||+ |+ ++++
T Consensus 17 ~~~~~~~w~~dg~~~~~-~-~~--------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~ 86 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYK-Q-EN--------NILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQW 86 (740)
T ss_dssp CCCCCEEECSSSEEEEE-E-TT--------EEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECS
T ss_pred ccccccEECCCCcEEEE-c-CC--------cEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeE
Confidence 34668899998755544 3 53 8999999999875554 2321 11 23558999998 44 4454
Q ss_pred -----CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 92 -----SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 92 -----~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+.+.|||..+|+.. .+.. |...+..++|+|||..|+.+. ++.|.+|++..
T Consensus 87 r~~~~~~~~~~d~~~~~~~-~l~~-~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~ 141 (740)
T 4a5s_A 87 RHSYTASYDIYDLNKRQLI-TEER-IPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPN 141 (740)
T ss_dssp SSCEEEEEEEEETTTTEEC-CSSC-CCTTEEEEEECSSTTCEEEEE-TTEEEEESSTT
T ss_pred EEccceEEEEEECCCCcEE-Eccc-CCCcceeeEECCCCCEEEEEE-CCeEEEEECCC
Confidence 45679999998754 4555 477899999999999998885 67899998653
No 172
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.46 E-value=2.5e-06 Score=74.51 Aligned_cols=99 Identities=9% Similarity=0.046 Sum_probs=76.7
Q ss_pred CCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-eeeeCCCeEEEEECCCCCEEEEeecCC
Q psy2083 34 SGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VLSMDSSVVKIWSKDNGSLFTCIESGD 112 (248)
Q Consensus 34 ~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h 112 (248)
+..+++++.++ .|.+||..+++.++.+.-.....++++.++|++ ++-+.++.|..||. +|+.+..+..++
T Consensus 5 ~~~lv~~~~~~--------~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~-~G~~~W~~~~~~ 75 (276)
T 3no2_A 5 QHLLVGGSGWN--------KIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITR-DGRELWNIAAPA 75 (276)
T ss_dssp CEEEEECTTCS--------EEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEECBSEEEEECT-TSCEEEEEECCT
T ss_pred CcEEEeeCCCC--------EEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeCCCCEEEECC-CCCEEEEEcCCC
Confidence 45555555554 899999999999888753322468999999998 44366788999999 899999998722
Q ss_pred CCCeeEEEEeCCCCEEEEEeC-CCeEEEEE
Q psy2083 113 QTQFNNLCHIPESGMMFIANE-NKKILTYY 141 (248)
Q Consensus 113 ~~~In~l~~~pdsgll~sa~e-d~~I~~w~ 141 (248)
...++++.+.|||+++++.+. +++|..++
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd 105 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGHPSTILEVN 105 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEESTTEEEEEEC
T ss_pred CccccccEECCCCCEEEEecCCCCEEEEEe
Confidence 358899999999999999887 66666554
No 173
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.45 E-value=5e-06 Score=73.67 Aligned_cols=128 Identities=7% Similarity=-0.008 Sum_probs=91.8
Q ss_pred ccchhcCceeEEEecCC----CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEE
Q psy2083 5 ELRQDKGSLFTCIESGD----QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIK 80 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~----~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~ 80 (248)
.+|..++++...+..+. ......+++ +++.+++++.. .+++|.+||+.+++.+.....+ .....+.
T Consensus 109 ~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~------~~~~v~viD~~t~~~~~~i~~g--~~p~~i~ 178 (328)
T 3dsm_A 109 IINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWS------YQNRILKIDTETDKVVDELTIG--IQPTSLV 178 (328)
T ss_dssp EEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECT------TCCEEEEEETTTTEEEEEEECS--SCBCCCE
T ss_pred EEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCC------CCCEEEEEECCCCeEEEEEEcC--CCccceE
Confidence 47888888888877541 014556666 46667766531 0248999999999876665433 3457899
Q ss_pred EcCCc--eeee-CC----------CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 81 FHDNY--VLSM-DS----------SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 81 F~~d~--l~Ss-dd----------~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+++++ .+++ .+ +.|.+||..+++...++........+.++++||++.|++++. .|.+|+...
T Consensus 179 ~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t 253 (328)
T 3dsm_A 179 MDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEA 253 (328)
T ss_dssp ECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTC
T ss_pred EcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCC
Confidence 99987 3333 33 689999999999888876411236899999999999999876 888988754
No 174
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.45 E-value=8.6e-06 Score=78.84 Aligned_cols=126 Identities=7% Similarity=-0.009 Sum_probs=94.3
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC--CCceeEEecCCCCCCeeEEEEc-
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR--ADKPLRVKDHMYGLPIRDIKFH- 82 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR--s~~pl~~~~h~~~~pI~sI~F~- 82 (248)
+|..+++.+..+..+ ..+..+.++||+.++++++.++ .|.+||+. +.+.+.....+ ..-..+.|+
T Consensus 182 iD~~t~~v~~~i~~g--~~p~~v~~SpDGr~lyv~~~dg--------~V~viD~~~~t~~~v~~i~~G--~~P~~ia~s~ 249 (567)
T 1qks_A 182 IDGSTYEIKTVLDTG--YAVHISRLSASGRYLFVIGRDG--------KVNMIDLWMKEPTTVAEIKIG--SEARSIETSK 249 (567)
T ss_dssp EETTTCCEEEEEECS--SCEEEEEECTTSCEEEEEETTS--------EEEEEETTSSSCCEEEEEECC--SEEEEEEECC
T ss_pred EECCCCeEEEEEeCC--CCccceEECCCCCEEEEEcCCC--------eEEEEECCCCCCcEeEEEecC--CCCceeEEcc
Confidence 788899999999876 4677899999988888887664 89999996 77666554433 345799999
Q ss_pred ---CCc---eee-eCCCeEEEEECCCCCEEEEeecC---------CCC--------------------------------
Q psy2083 83 ---DNY---VLS-MDSSVVKIWSKDNGSLFTCIESG---------DQT-------------------------------- 114 (248)
Q Consensus 83 ---~d~---l~S-sdd~~IKIWD~~tGk~~~tie~~---------h~~-------------------------------- 114 (248)
||+ +++ -.+++|.|+|..+++++.++... |+.
T Consensus 250 ~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~ 329 (567)
T 1qks_A 250 MEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTD 329 (567)
T ss_dssp STTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTC
T ss_pred ccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCC
Confidence 587 333 36899999999999988876531 000
Q ss_pred -------------CeeEEEEeCCCCEEEEEeC-CCeEEEEEcC
Q psy2083 115 -------------QFNNLCHIPESGMMFIANE-NKKILTYYIP 143 (248)
Q Consensus 115 -------------~In~l~~~pdsgll~sa~e-d~~I~~w~Ip 143 (248)
...++.|+|||.++++++. +.+|.+++..
T Consensus 330 ~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~ 372 (567)
T 1qks_A 330 LNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTK 372 (567)
T ss_dssp SSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETT
T ss_pred CccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECC
Confidence 1236789999998888774 5789888854
No 175
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.45 E-value=3.7e-06 Score=73.20 Aligned_cols=110 Identities=9% Similarity=0.151 Sum_probs=77.8
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-ee-C---------
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SM-D--------- 90 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ss-d--------- 90 (248)
.+...+|+||+..++.++.+.. .....|.+||+.++++.....+. . +..+.|+||+ |+ ++ +
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~---~~~~~l~~~~~~~g~~~~l~~~~--~-~~~~~wspdg~~l~~~~~~~~~~~~~~~ 133 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEE---KKVSEIWVADLETLSSKKILEAK--N-IRSLEWNEDSRKLLIVGFKRREDEDFIF 133 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETT---TTEEEEEEEETTTTEEEEEEEES--E-EEEEEECTTSSEEEEEEECCCC------
T ss_pred cCCCeEECCCCCEEEEEEeccC---CCcceEEEEECCCCceEEEEcCC--C-ccceeECCCCCEEEEEEccCCCcCCcEE
Confidence 4677899998887776554310 00125888899988776655443 3 8999999997 33 33 2
Q ss_pred -----------------CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC-------eEEEEEcC
Q psy2083 91 -----------------SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK-------KILTYYIP 143 (248)
Q Consensus 91 -----------------d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~-------~I~~w~Ip 143 (248)
...|.+||..+|+.+..+.. . .+.+++|+||| ++++++.+. ...+|.+.
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~--~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 134 EDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK--P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp ---CCCC---------CEEEEEEEETTTTEEEEEEEE--E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE
T ss_pred EcccceeecCcccccCccceEEEEECCCCeEEeeecC--C-CcccccCCCCe-EEEEEecccccccccccccEEEeC
Confidence 25799999998887566766 4 78899999999 888887652 45666654
No 176
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.45 E-value=5.2e-06 Score=73.51 Aligned_cols=127 Identities=6% Similarity=-0.033 Sum_probs=92.0
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCC----CCeeEEE
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYG----LPIRDIK 80 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~----~pI~sI~ 80 (248)
-+|+.+|+.+.++... .....+++++++ .++++...+ +.|.+||+.+++......-+.+ .....++
T Consensus 68 viD~~t~~~~~~i~~~--~~p~~i~~~~~g-~lyv~~~~~-------~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~ 137 (328)
T 3dsm_A 68 AIDINTFKEVGRITGF--TSPRYIHFLSDE-KAYVTQIWD-------YRIFIINPKTYEITGYIECPDMDMESGSTEQMV 137 (328)
T ss_dssp EEETTTCCEEEEEECC--SSEEEEEEEETT-EEEEEEBSC-------SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEE
T ss_pred EEECcccEEEEEcCCC--CCCcEEEEeCCC-eEEEEECCC-------CeEEEEECCCCeEEEEEEcCCccccCCCcceEE
Confidence 3688899999998754 567888887865 666666332 3899999999876654432210 1446777
Q ss_pred EcCCc-eeee--CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC----------CeEEEEEcC
Q psy2083 81 FHDNY-VLSM--DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN----------KKILTYYIP 143 (248)
Q Consensus 81 F~~d~-l~Ss--dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed----------~~I~~w~Ip 143 (248)
+.... .++. .++.|.+||..+++.+.++.. ....+++++.|+|.+++++..+ +.|.+++..
T Consensus 138 ~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~--g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~ 211 (328)
T 3dsm_A 138 QYGKYVYVNCWSYQNRILKIDTETDKVVDELTI--GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE 211 (328)
T ss_dssp EETTEEEEEECTTCCEEEEEETTTTEEEEEEEC--SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT
T ss_pred EECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc--CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECC
Confidence 74333 3333 478999999999999999986 4567889999999977776654 688888854
No 177
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.42 E-value=3.3e-06 Score=74.50 Aligned_cols=125 Identities=7% Similarity=0.015 Sum_probs=83.1
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEE--EcC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIK--FHD 83 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~--F~~ 83 (248)
+|..+|+......++ ...+...+|+||+..++.++.+. .|.+||+.++++....... ...+.... +++
T Consensus 65 ~d~~~g~~~~lt~~~-~~~~~~~~~spdg~~l~~~~~~~--------~l~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~~ 134 (388)
T 3pe7_A 65 LDLNTQVATQLTEGR-GDNTFGGFLSPDDDALFYVKDGR--------NLMRVDLATLEENVVYQVP-AEWVGYGTWVANS 134 (388)
T ss_dssp EETTTCEEEECCCSS-CBCSSSCEECTTSSEEEEEETTT--------EEEEEETTTCCEEEEEECC-TTEEEEEEEEECT
T ss_pred EeCCCCceEEeeeCC-CCCccceEEcCCCCEEEEEeCCC--------eEEEEECCCCcceeeeech-hhcccccceeECC
Confidence 345556655544443 33444678999888888777664 8999999999765543221 23344444 377
Q ss_pred Cc--eee-----------------------eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeC-CCCEEEEEeCCC--
Q psy2083 84 NY--VLS-----------------------MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENK-- 135 (248)
Q Consensus 84 d~--l~S-----------------------sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p-dsgll~sa~ed~-- 135 (248)
++ +++ ..+..|.+||..+|+....... ...+++++|+| ||+.|+.+.+++
T Consensus 135 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~--~~~~~~~~~sp~dg~~l~~~~~~~~~ 212 (388)
T 3pe7_A 135 DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQE--NQWLGHPIYRPYDDSTVAFCHEGPHD 212 (388)
T ss_dssp TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEE--SSCEEEEEEETTEEEEEEEEECSCTT
T ss_pred CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecC--CccccccEECCCCCCEEEEEEecCCC
Confidence 76 331 1346799999999986555444 67899999999 999888777643
Q ss_pred ----eEEEEEc
Q psy2083 136 ----KILTYYI 142 (248)
Q Consensus 136 ----~I~~w~I 142 (248)
.|.++++
T Consensus 213 ~~~~~l~~~d~ 223 (388)
T 3pe7_A 213 LVDARMWLINE 223 (388)
T ss_dssp TSSCSEEEEET
T ss_pred CCcceEEEEeC
Confidence 5666654
No 178
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.41 E-value=6.2e-06 Score=72.00 Aligned_cols=128 Identities=9% Similarity=0.135 Sum_probs=94.8
Q ss_pred ccccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCC-----CCCCee
Q psy2083 3 AQELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHM-----YGLPIR 77 (248)
Q Consensus 3 ~~~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~-----~~~pI~ 77 (248)
.+++|+ +|+++-.+..++...+.++.+.+++..+++.+.+. +.|..+|. .++.++...-. .-.+..
T Consensus 58 V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~-------~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~ 128 (276)
T 3no2_A 58 AKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHP-------STILEVNM-KGEVLSKTEFETGIERPHAQFR 128 (276)
T ss_dssp EEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTT-------EEEEEECT-TSCEEEEEEECCSCSSGGGSCS
T ss_pred EEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCC-------CEEEEEeC-CCCEEEEEeccCCCCccccccc
Confidence 357888 89999998875345788888889887777766622 26777775 66666554211 012456
Q ss_pred EEEEcCCc--eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 78 DIKFHDNY--VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 78 sI~F~~d~--l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
.+.+.+++ +++ ..++.|..||.+ |+.+.++.. ...+.++.+.|+|.++++++.+++|..++.
T Consensus 129 ~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~--~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~ 193 (276)
T 3no2_A 129 QINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKL--SGTPFSSAFLDNGDCLVACGDAHCFVQLNL 193 (276)
T ss_dssp CCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEEC--SSCCCEEEECTTSCEEEECBTTSEEEEECT
T ss_pred CceECCCCCEEEEecCCCEEEEECCC-CCEEEEEEC--CCCccceeEcCCCCEEEEeCCCCeEEEEeC
Confidence 67888887 444 468899999998 999999987 456778899999999999988888988863
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.41 E-value=1.3e-05 Score=69.60 Aligned_cols=131 Identities=8% Similarity=0.040 Sum_probs=82.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d 84 (248)
+|..+|+.......+ ...+..+++.|++.+++++..+. ...+.|.+||..+++..... ....+..++++.|+|+
T Consensus 71 ~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~----~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~ 145 (333)
T 2dg1_A 71 INPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDF----KSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSK 145 (333)
T ss_dssp ECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTS----SSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTT
T ss_pred EeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCCC----CCCceEEEEeCCCCEEEEEEccCccCCcccceEECCC
Confidence 566667665554332 36788999888765444443330 01137999999887654222 2223467999999999
Q ss_pred c--eeeeC-------CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEE-eCCCeEEEEEcC
Q psy2083 85 Y--VLSMD-------SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIA-NENKKILTYYIP 143 (248)
Q Consensus 85 ~--l~Ssd-------d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa-~ed~~I~~w~Ip 143 (248)
+ ++++. .+.|-.||.++++....... ...++.++|+|||..|+++ +.++.|..|++.
T Consensus 146 g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 146 GGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--ISVANGIALSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp SCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred CCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CCcccceEECCCCCEEEEEeCCCCeEEEEEec
Confidence 8 33432 24555666665555433333 4568899999999865554 567899999874
No 180
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.41 E-value=2.5e-06 Score=76.95 Aligned_cols=94 Identities=14% Similarity=0.182 Sum_probs=70.2
Q ss_pred EEEeCCCCcEEEeec-Cceeeee---cCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCC
Q psy2083 28 LCHIPESGMMFIANE-NKKILTY---YIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDN 101 (248)
Q Consensus 28 ~~~~~~~g~l~~ag~-d~~~~~~---~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~t 101 (248)
++|+|+++.++++++ +.. .++ ..++|.+||+.+++.+....-+ . ..+|+|+|++ +.+++.+.|.+||..+
T Consensus 259 ~a~~~dg~~lyv~~~~~~~-~~~~~~~~~~v~viD~~t~~~v~~i~~~--~-p~~ia~spdg~~l~v~n~~~v~v~D~~t 334 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGK-EGTHKFPAAEIWVMDTKTKQRVARIPGR--D-ALSMTIDQQRNLMLTLDGGNVNVYDISQ 334 (361)
T ss_dssp EEEETTTTEEEEEEESSCC-TTCTTCCCSEEEEEETTTTEEEEEEECT--T-CCEEEEETTTTEEEEECSSCEEEEECSS
T ss_pred EEEecCCCeEEEEEccCCC-cccccCCCceEEEEECCCCcEEEEEecC--C-eeEEEECCCCCEEEEeCCCeEEEEECCC
Confidence 677888787777654 110 000 1248999999999888775433 3 8999999998 5555459999999999
Q ss_pred C--CEEEEeecCCCCCeeEEEEeCCCC
Q psy2083 102 G--SLFTCIESGDQTQFNNLCHIPESG 126 (248)
Q Consensus 102 G--k~~~tie~~h~~~In~l~~~pdsg 126 (248)
| +.+.++.+ .....+.++++|||+
T Consensus 335 ~~l~~~~~i~~-~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 335 PEPKLLRTIEG-AAEASLQVQFHPVGG 360 (361)
T ss_dssp SSCEEEEEETT-SCSSEEEEEECCCSC
T ss_pred CcceeeEEecc-CCCCcEEEEecCCCC
Confidence 9 99999854 256788999999987
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.40 E-value=2.5e-06 Score=83.16 Aligned_cols=116 Identities=3% Similarity=-0.008 Sum_probs=79.3
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCe-------
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSV------- 93 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~------- 93 (248)
.+..++|+||+..++.+.+++ |+...+|++||+.+++.+...... ..+.+++|+||+ +.++.++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~---G~~~~~i~v~d~~tg~~~~~~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSAS---GSDWVTIKFMKVDGAKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEET---TCSCEEEEEEETTTTEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred EEEEEEECCCCCEEEEEEcCC---CCceEEEEEEECCCCCCCcccccC--cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 477889999888776554443 111238999999999876533222 236789999997 44555444
Q ss_pred ---------EEEEECCCCCE--EEEeec-CCCCCeeEEEEeCCCCEEEEEeC-----CCeEEEEEcCC
Q psy2083 94 ---------VKIWSKDNGSL--FTCIES-GDQTQFNNLCHIPESGMMFIANE-----NKKILTYYIPS 144 (248)
Q Consensus 94 ---------IKIWD~~tGk~--~~tie~-~h~~~In~l~~~pdsgll~sa~e-----d~~I~~w~Ip~ 144 (248)
|.+|++.+++. ...++. .|...+.+++|+|||+.|+.++. +..|.+|++..
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 99999998762 222232 12445778999999998888765 56788888753
No 182
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.40 E-value=5.2e-06 Score=74.83 Aligned_cols=132 Identities=5% Similarity=-0.034 Sum_probs=85.3
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCce--eeeecCCeeEEEEcCCCceeEEecCC-----CCCCee
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKK--ILTYYIPAFYLYDIRADKPLRVKDHM-----YGLPIR 77 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~--~~~~~~G~V~LwDlRs~~pl~~~~h~-----~~~pI~ 77 (248)
.+|..+|+.+..+..+ ... .++++||+..+++++.... .-|..+++|.+||+.+.+++....-. .+....
T Consensus 35 v~D~~t~~~~~~i~~g-~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~ 111 (361)
T 2oiz_A 35 VYDYTNGKFLGMVPTA-FNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDG 111 (361)
T ss_dssp EEETTTCCEEEEEECC-EEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGG
T ss_pred EEECCCCeEEEEecCC-CCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcc
Confidence 4678899999998876 233 8999999888888763100 00001248999999998877654211 124567
Q ss_pred EEEEcCCc--ee-ee-C-CCeEEEEECCCCCEEEE-eecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEc
Q psy2083 78 DIKFHDNY--VL-SM-D-SSVVKIWSKDNGSLFTC-IESGDQTQFNNLCHIPES-GMMFIANENKKILTYYI 142 (248)
Q Consensus 78 sI~F~~d~--l~-Ss-d-d~~IKIWD~~tGk~~~t-ie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~I 142 (248)
.+.|+|++ +. +. . ++.|.+||..+++.+.+ +.. ... ..+.+.|++ ..+++.+.|+++..|.+
T Consensus 112 ~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~--~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~ 180 (361)
T 2oiz_A 112 LFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA--AGC-WSVIPQPNRPRSFMTICGDGGLLTINL 180 (361)
T ss_dssp GEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG--TTE-EEEEECTTSSSEEEEEETTSSEEEEEE
T ss_pred eEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC--CCc-ceeEEcCCCCeeEEEECCCCcEEEEEE
Confidence 89999998 43 33 3 68999999999999888 654 211 123455554 34445555555555543
No 183
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.38 E-value=5e-06 Score=73.32 Aligned_cols=117 Identities=7% Similarity=0.010 Sum_probs=80.2
Q ss_pred cchhcCceeEEEecCCCCCeeE-----EEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEE
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNN-----LCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIK 80 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~-----~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~ 80 (248)
++..+|..++.+..+ ...+.. .+|+||+..++.++..++ ...|.+||+.++++..... .++..+..+.
T Consensus 15 ~~~~~g~~~~~lt~~-~~~~~~~~~~~~~~SpDg~~l~~~~~~~g-----~~~l~~~d~~~g~~~~lt~-~~~~~~~~~~ 87 (388)
T 3pe7_A 15 QDASTGAQVTRLTPP-DVTCHRNYFYQKCFTRDGSKLLFGGAFDG-----PWNYYLLDLNTQVATQLTE-GRGDNTFGGF 87 (388)
T ss_dssp ECTTTCCEEEECSCT-TSCEECCCTTSCCBCTTSCEEEEEECTTS-----SCEEEEEETTTCEEEECCC-SSCBCSSSCE
T ss_pred ecCCCCcceEEecCC-cccccchhhcCccCCCCCCEEEEEEcCCC-----CceEEEEeCCCCceEEeee-CCCCCccceE
Confidence 356678888777655 344444 778998887777766331 1258889999987765543 3345566788
Q ss_pred EcCCc--ee-eeCCCeEEEEECCCCCEEEEeecCCCCCeeEE--EEeCCCCEEEE
Q psy2083 81 FHDNY--VL-SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNL--CHIPESGMMFI 130 (248)
Q Consensus 81 F~~d~--l~-Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l--~~~pdsgll~s 130 (248)
|+||+ |+ ++.++.|.+||..+|+....++. +...+... .++||+.+++.
T Consensus 88 ~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~dg~~l~~ 141 (388)
T 3pe7_A 88 LSPDDDALFYVKDGRNLMRVDLATLEENVVYQV-PAEWVGYGTWVANSDCTKLVG 141 (388)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-CTTEEEEEEEEECTTSSEEEE
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcceeeeec-hhhcccccceeECCCCCeecc
Confidence 99998 44 45678999999999987766665 23444333 34899988774
No 184
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.36 E-value=2e-06 Score=83.71 Aligned_cols=115 Identities=9% Similarity=0.032 Sum_probs=75.1
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eeeCCCe------
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSMDSSV------ 93 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ssdd~~------ 93 (248)
..+..+.|+||+..++.+.+.+ |+.+.+|++||+.+++++. .++..+....+++|+||+ + .++.+..
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~---G~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~ 196 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPN---AADEAVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVD 196 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEET---TCSCCEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGG
T ss_pred EEEEEEEECCCCCEEEEEECCC---CCceEEEEEEECCCCCCcC-CcccCcccccceEEecCCCEEEEEEecCCCCCccc
Confidence 3577889999887766433321 1223589999999998751 122211223689999997 4 4455554
Q ss_pred -------EEEEECCCCC----EEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC--eEEEEEc
Q psy2083 94 -------VKIWSKDNGS----LFTCIESGDQTQFNNLCHIPESGMMFIANENK--KILTYYI 142 (248)
Q Consensus 94 -------IKIWD~~tGk----~~~tie~~h~~~In~l~~~pdsgll~sa~ed~--~I~~w~I 142 (248)
|++|++.++. ++..... |...+.+++++|||..|++++.++ +..+|.+
T Consensus 197 ~~~~~~~v~~~~l~t~~~~~~lv~~~~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~ 257 (695)
T 2bkl_A 197 ERPGYTTIRYHTLGTEPSKDTVVHERTG-DPTTFLQSDLSRDGKYLFVYILRGWSENDVYWK 257 (695)
T ss_dssp GGGGGCEEEEEETTSCGGGCEEEECCCC-CTTCEEEEEECTTSCCEEEEEEETTTEEEEEEE
T ss_pred cCCCCCEEEEEECCCCchhceEEEecCC-CCEEEEEEEECCCCCEEEEEEeCCCCceEEEEE
Confidence 9999999886 2322222 345788999999999888777554 4445544
No 185
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.35 E-value=2.1e-06 Score=81.95 Aligned_cols=119 Identities=3% Similarity=-0.024 Sum_probs=80.1
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC-CC---ceeEEecCCCCCCeeEEEEcCCc--eeee-CCC--
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR-AD---KPLRVKDHMYGLPIRDIKFHDNY--VLSM-DSS-- 92 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR-s~---~pl~~~~h~~~~pI~sI~F~~d~--l~Ss-dd~-- 92 (248)
...+..+.|+||+..|+.++.+...+......|.+||+. ++ ++..... ++...+.++.|+||+ ++++ .++
T Consensus 187 ~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~-~~~~~~~~~~~spdg~l~~~~~~~~~~ 265 (662)
T 3azo_A 187 HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG-GPEEAIAQAEWAPDGSLIVATDRTGWW 265 (662)
T ss_dssp SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE-ETTBCEEEEEECTTSCEEEEECTTSSC
T ss_pred CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC-CCCceEcceEECCCCeEEEEECCCCCe
Confidence 367788899999888876664420000011379999999 56 4433332 223679999999998 4444 456
Q ss_pred eEEEEECCCCCEEEEeecCCCCC--------eeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 93 VVKIWSKDNGSLFTCIESGDQTQ--------FNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 93 ~IKIWD~~tGk~~~tie~~h~~~--------In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
.|.+||..+|+....... +... +.+++|+|++.+++++++ +++++|.+.
T Consensus 266 ~l~~~~~~~~~~~~l~~~-~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 266 NLHRVDPATGAATQLCRR-EEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp EEEEECTTTCCEEESSCC-SSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEE
T ss_pred EEEEEECCCCceeecccc-cccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEE
Confidence 566777777775543332 1221 678999999999999999 999999654
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.34 E-value=2.7e-05 Score=67.50 Aligned_cols=113 Identities=12% Similarity=0.142 Sum_probs=77.5
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cCCCCCCeeEEEEcCCc--e
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DHMYGLPIRDIKFHDNY--V 86 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h~~~~pI~sI~F~~d~--l 86 (248)
.+.....+..+ ...+.++++.|++. ++.++..+ +.|.+||..+++..... .+ ...+.+++|++++ +
T Consensus 33 ~~~~~~~~~~~-~~~~~~~~~~~~g~-l~~~~~~~-------~~i~~~d~~~~~~~~~~~~~--~~~~~~i~~~~dg~l~ 101 (333)
T 2dg1_A 33 TAEPWLEISKK-GLQLEGLNFDRQGQ-LFLLDVFE-------GNIFKINPETKEIKRPFVSH--KANPAAIKIHKDGRLF 101 (333)
T ss_dssp ECEEEEEEESS-CCCEEEEEECTTSC-EEEEETTT-------CEEEEECTTTCCEEEEEECS--SSSEEEEEECTTSCEE
T ss_pred ccceeEEEecc-CccccCcEECCCCC-EEEEECCC-------CEEEEEeCCCCcEEEEeeCC--CCCcceEEECCCCcEE
Confidence 45555666554 35678888887655 55444332 38999999988765443 33 3679999999997 4
Q ss_pred eee-CC----CeEEEEECCCCCEEEEeec-CCCCCeeEEEEeCCCCEEEEEeC
Q psy2083 87 LSM-DS----SVVKIWSKDNGSLFTCIES-GDQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 87 ~Ss-dd----~~IKIWD~~tGk~~~tie~-~h~~~In~l~~~pdsgll~sa~e 133 (248)
+++ .+ +.|.+||.++++....+.. .+...++++++.|+|.++++...
T Consensus 102 v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 154 (333)
T 2dg1_A 102 VCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFR 154 (333)
T ss_dssp EEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECC
T ss_pred EEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEecc
Confidence 443 34 5899999998876544431 11457999999999988777654
No 187
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.32 E-value=2.6e-05 Score=66.61 Aligned_cols=115 Identities=17% Similarity=0.204 Sum_probs=78.9
Q ss_pred CCeeEEEEe----CCCCcEEEeecCceeeeecCCeeEEEEcC-CCce----eEEecCCCC-CCeeEEEEcCCc---eeee
Q psy2083 23 TQFNNLCHI----PESGMMFIANENKKILTYYIPAFYLYDIR-ADKP----LRVKDHMYG-LPIRDIKFHDNY---VLSM 89 (248)
Q Consensus 23 ~~V~~~~~~----~~~g~l~~ag~d~~~~~~~~G~V~LwDlR-s~~p----l~~~~h~~~-~pI~sI~F~~d~---l~Ss 89 (248)
...+.++++ |++..++.+...+ +.|.+||+. .++. .......+. .....+++++++ +.+.
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~-------~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~ 244 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPT-------KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW 244 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTT-------TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE
T ss_pred CCcceEEEecccCCCCCEEEEEECCC-------CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEc
Confidence 346788888 8765666554432 389999987 4432 111111111 346789999987 3334
Q ss_pred CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEE-eCCCeEEEEEcCCC
Q psy2083 90 DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIA-NENKKILTYYIPSL 145 (248)
Q Consensus 90 dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa-~ed~~I~~w~Ip~l 145 (248)
.++.|.+||.++|+.+..+.. +...+.+++|+||+..|+++ ..++.|..|++..-
T Consensus 245 ~~~~i~~~d~~~g~~~~~~~~-~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 245 GSSHIEVFGPDGGQPKMRIRC-PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp TTTEEEEECTTCBSCSEEEEC-SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCCEEEEEcCCCCcEeEEEeC-CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 678999999998988888876 25789999999999955554 55689999987653
No 188
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.31 E-value=1.2e-05 Score=70.65 Aligned_cols=130 Identities=8% Similarity=0.020 Sum_probs=81.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d 84 (248)
+|..+|+......+ ...+..+.|+| +++.++.++.+.. ......|.+||+..+++.....+..+..+..+.|+|+
T Consensus 173 ~d~~~g~~~~~~~~--~~~~~~~~~sp~dg~~l~~~~~~~~--~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spd 248 (396)
T 3c5m_A 173 VDIETGELEVIHQD--TAWLGHPIYRPFDDSTVGFCHEGPH--DLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPD 248 (396)
T ss_dssp EETTTCCEEEEEEE--SSCEEEEEEETTEEEEEEEEECSCS--SSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTT
T ss_pred EECCCCcEEeeccC--CcccccceECCCCCCEEEEEecCCC--CCCCceEEEEECCCCceeEeeccCCCccccceEECCC
Confidence 35556665554443 35788899999 6665655443220 0001378999998765433333222345888999999
Q ss_pred c--ee-eeCC-----CeEEEEECCCCCEEEEeecCCCCCeeEEEEeC-CCCEEEEEe----------------CCCeEEE
Q psy2083 85 Y--VL-SMDS-----SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIP-ESGMMFIAN----------------ENKKILT 139 (248)
Q Consensus 85 ~--l~-Ssdd-----~~IKIWD~~tGk~~~tie~~h~~~In~l~~~p-dsgll~sa~----------------ed~~I~~ 139 (248)
+ |+ .+.+ +.|.+||..+|+....... . ..+ ++|+| ||.++++++ .+..|.+
T Consensus 249 g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~--~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~ 324 (396)
T 3c5m_A 249 GSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM--P-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYV 324 (396)
T ss_dssp SSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC--C-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEE
T ss_pred CCEEEEEecCCCCccceEEEEECCCCCeEEeeeC--C-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEE
Confidence 7 33 3322 4599999998876443332 2 234 89999 999888765 3467888
Q ss_pred EEcC
Q psy2083 140 YYIP 143 (248)
Q Consensus 140 w~Ip 143 (248)
|++.
T Consensus 325 ~d~~ 328 (396)
T 3c5m_A 325 LNTK 328 (396)
T ss_dssp EETT
T ss_pred Eecc
Confidence 8864
No 189
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.29 E-value=2.5e-05 Score=67.03 Aligned_cols=124 Identities=12% Similarity=0.083 Sum_probs=79.8
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC--C-CCCCeeEEEEc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH--M-YGLPIRDIKFH 82 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h--~-~~~pI~sI~F~ 82 (248)
++..++ ...+..+ ...+..+++.|++.++++...+. .|.+||..+++....... . ....++.++++
T Consensus 55 ~~~~~~--~~~~~~~-~~~~~~l~~~~dg~l~v~~~~~~--------~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d 123 (296)
T 3e5z_A 55 WSDDGQ--LSPEMHP-SHHQNGHCLNKQGHLIACSHGLR--------RLERQREPGGEWESIADSFEGKKLNSPNDVCLA 123 (296)
T ss_dssp EETTSC--EEEEESS-CSSEEEEEECTTCCEEEEETTTT--------EEEEECSTTCCEEEEECEETTEECCCCCCEEEC
T ss_pred EECCCC--eEEEECC-CCCcceeeECCCCcEEEEecCCC--------eEEEEcCCCCcEEEEeeccCCCCCCCCCCEEEC
Confidence 555555 5555543 46788888888665444433333 799999988865433211 1 11346789999
Q ss_pred CCc--eee----e--------------CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 83 DNY--VLS----M--------------DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 83 ~d~--l~S----s--------------dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
|++ +++ + ..+.|-.+|.. |+. ..+.. +....+.++|+|||..+++.+.+++|..|++
T Consensus 124 ~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~-~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~ 200 (296)
T 3e5z_A 124 PDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIR-DRVKPNGLAFLPSGNLLVSDTGDNATHRYCL 200 (296)
T ss_dssp TTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEEC-CCSSEEEEEECTTSCEEEEETTTTEEEEEEE
T ss_pred CCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeec-CCCCCccEEECCCCCEEEEeCCCCeEEEEEE
Confidence 998 332 1 02345455555 554 44444 2677899999999998877777899999998
Q ss_pred C
Q psy2083 143 P 143 (248)
Q Consensus 143 p 143 (248)
.
T Consensus 201 ~ 201 (296)
T 3e5z_A 201 N 201 (296)
T ss_dssp C
T ss_pred C
Confidence 5
No 190
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.17 E-value=2.4e-06 Score=75.09 Aligned_cols=131 Identities=10% Similarity=0.070 Sum_probs=84.6
Q ss_pred cchhcCceeEEEecCCCCC-----eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEE
Q psy2083 6 LRQDKGSLFTCIESGDQTQ-----FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIK 80 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~-----V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~ 80 (248)
+|..+|..++.+..+ ... +..++|+|++..++.++..+ ....|.+||+.++++.....+. ...+..+.
T Consensus 15 ~d~~~g~~~~~l~~~-~~~~~~~~~~~~~~SpdG~~l~~~~~~~-----g~~~l~~~d~~~~~~~~l~~~~-~~~~~~~~ 87 (396)
T 3c5m_A 15 VDSDTQVKVTRLTPT-DIICHRNYFYQKCFTQDGKKLLFAGDFD-----GNRNYYLLNLETQQAVQLTEGK-GDNTFGGF 87 (396)
T ss_dssp ECTTTCCEEEECSCT-TSCEECCCTTSCCBCTTSCEEEEEECTT-----SSCEEEEEETTTTEEEECCCSS-CBCTTTCE
T ss_pred ecCCCCcceEEEecC-CCCccceeeecCcCCCCCCEEEEEEecC-----CCceEEEEECCCCcEEEeecCC-CCccccce
Confidence 577788877777543 222 67888999888766655442 1247889999988765543322 22233478
Q ss_pred EcCCc--e-eeeCCCeEEEEECCCCCEEEEeecCCCCCeeE-------------------EEEeCCCCEEEEE-----eC
Q psy2083 81 FHDNY--V-LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNN-------------------LCHIPESGMMFIA-----NE 133 (248)
Q Consensus 81 F~~d~--l-~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~-------------------l~~~pdsgll~sa-----~e 133 (248)
|+||+ | .++.++.|.+||..+|+....... +.....+ ++++||+..++.+ ..
T Consensus 88 ~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~ 166 (396)
T 3c5m_A 88 ISTDERAFFYVKNELNLMKVDLETLEEQVIYTV-DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNP 166 (396)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCC
T ss_pred ECCCCCEEEEEEcCCcEEEEECCCCCcEEEEec-ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCC
Confidence 99997 4 456777999999999887665553 1332222 3457777665544 34
Q ss_pred CCeEEEEEcCC
Q psy2083 134 NKKILTYYIPS 144 (248)
Q Consensus 134 d~~I~~w~Ip~ 144 (248)
+..|.+|++..
T Consensus 167 ~~~l~~~d~~~ 177 (396)
T 3c5m_A 167 TCRLIKVDIET 177 (396)
T ss_dssp CEEEEEEETTT
T ss_pred cceEEEEECCC
Confidence 56777777643
No 191
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.17 E-value=1.3e-05 Score=74.35 Aligned_cols=106 Identities=12% Similarity=0.074 Sum_probs=80.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc-----------eeEEecCCCCCCeeEEEEcCCc-eeeeC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK-----------PLRVKDHMYGLPIRDIKFHDNY-VLSMD 90 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~-----------pl~~~~h~~~~pI~sI~F~~d~-l~Ssd 90 (248)
..++.++.++..|++++||.+ .+.+|++.+.+ |.....+. . |+.|+| .+. ++.+.
T Consensus 38 ~~~nlLais~~~gll~a~~~~---------~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp--~-V~~l~f-d~~~L~v~~ 104 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGS---------KAVVGELQLLRDHITSDSTPLTFKWEKEIP--D-VIFVCF-HGDQVLVST 104 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETT---------EEEEEEHHHHHHHHHSSSCCCCCSEEEECT--T-EEEEEE-ETTEEEEEE
T ss_pred ccccEEEEcCCCCEEEEeCCC---------EEEEEEhhHhhhhhccccccccceEEeeCC--C-eeEEEE-CCCEEEEEc
Confidence 368999999999999988888 47789865432 43344444 5 999999 333 55558
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++.|++||..+-....++.. +..+++++.+.+.. +++++.|+.+.+|++..
T Consensus 105 ~~~l~v~dv~sl~~~~~~~~-~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~ 155 (388)
T 1xip_A 105 RNALYSLDLEELSEFRTVTS-FEKPVFQLKNVNNT--LVILNSVNDLSALDLRT 155 (388)
T ss_dssp SSEEEEEESSSTTCEEEEEE-CSSCEEEEEECSSE--EEEEETTSEEEEEETTT
T ss_pred CCcEEEEEchhhhccCccce-eecceeeEEecCCC--EEEEECCCCEEEEEccC
Confidence 89999999987666556665 47789988776653 88899999999999874
No 192
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.14 E-value=4.2e-05 Score=64.02 Aligned_cols=112 Identities=3% Similarity=-0.025 Sum_probs=76.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee-eeCCCeEEEEEC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL-SMDSSVVKIWSK 99 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~-Ssdd~~IKIWD~ 99 (248)
..+..+++.+++. ++.+...+ +.|.+||........... .....+..|++++++ .+ ...++.|.+||.
T Consensus 150 ~~p~~i~~~~~g~-l~v~~~~~-------~~i~~~~~~~~~~~~~~~-~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~ 220 (270)
T 1rwi_B 150 NDPDGVAVDNSGN-VYVTDTDN-------NRVVKLEAESNNQVVLPF-TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLA 220 (270)
T ss_dssp CSCCCEEECTTCC-EEEEEGGG-------TEEEEECTTTCCEEECCC-SSCCSEEEEEECTTCCEEEEETTTSCEEEECT
T ss_pred CCceeEEEeCCCC-EEEEECCC-------CEEEEEecCCCceEeecc-cCCCCceEEEECCCCCEEEEECCCCcEEEEcC
Confidence 3567788887654 55554432 389999998765433221 111457899999987 33 335788999999
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.+.... .+...+...+.++++.|+|.++++...+++|.+|..+.
T Consensus 221 ~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 221 GSTTST-VLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp TCSCCE-ECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred CCCcce-eeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 755433 33321135788999999999888888899999997653
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.13 E-value=3.8e-05 Score=74.28 Aligned_cols=100 Identities=7% Similarity=-0.063 Sum_probs=79.7
Q ss_pred CCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEECC--CCCEEEEe
Q psy2083 34 SGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWSKD--NGSLFTCI 108 (248)
Q Consensus 34 ~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~~--tGk~~~ti 108 (248)
++.++++..++ |+|.++|..+++.+.....+ ..+..+.|+||+ .+++.++.|.+||.. +++.+.++
T Consensus 166 ~~~~~V~~~~~-------~~V~viD~~t~~v~~~i~~g--~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i 236 (567)
T 1qks_A 166 ENLFSVTLRDA-------GQIALIDGSTYEIKTVLDTG--YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI 236 (567)
T ss_dssp GGEEEEEETTT-------TEEEEEETTTCCEEEEEECS--SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEE
T ss_pred CceEEEEeCCC-------CeEEEEECCCCeEEEEEeCC--CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEE
Confidence 34455555553 59999999999888776554 567799999998 555678899999996 89999999
Q ss_pred ecCCCCCeeEEEEe----CCCCEEEEEeCC-CeEEEEEcCC
Q psy2083 109 ESGDQTQFNNLCHI----PESGMMFIANEN-KKILTYYIPS 144 (248)
Q Consensus 109 e~~h~~~In~l~~~----pdsgll~sa~ed-~~I~~w~Ip~ 144 (248)
.. ......++|+ |||++++++++. ++|.+++...
T Consensus 237 ~~--G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 237 KI--GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp EC--CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred ec--CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 87 4567899999 799999999876 8999998544
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.05 E-value=0.00044 Score=58.05 Aligned_cols=125 Identities=6% Similarity=-0.027 Sum_probs=79.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
++. +|+........+...+..+++.+++ .+..+.... +.|..||. +++............+..+++++++
T Consensus 125 ~d~-~g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~-------~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g 194 (299)
T 2z2n_A 125 ITD-DGKIREYELPNKGSYPSFITLGSDN-ALWFTENQN-------NAIGRITE-SGDITEFKIPTPASGPVGITKGNDD 194 (299)
T ss_dssp ECT-TCCEEEEECSSTTCCEEEEEECTTS-CEEEEETTT-------TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS
T ss_pred ECC-CCCEEEecCCCCCCCCceEEEcCCC-CEEEEeCCC-------CEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCC
Confidence 444 4554433222123567788887765 455444332 37999999 6654433222223467899999987
Q ss_pred --eee-eCCCeEEEEECCCCCEEEEeec-CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 86 --VLS-MDSSVVKIWSKDNGSLFTCIES-GDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 86 --l~S-sdd~~IKIWD~~tGk~~~tie~-~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
.++ ..++.|.+||. +|+... +.. .+...+.++++.|+|.+.++...++.|..|+.
T Consensus 195 ~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 195 ALWFVEIIGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp SEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CEEEEccCCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 333 34788999999 777543 432 12467899999999886666557788998874
No 195
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.05 E-value=8.2e-05 Score=64.46 Aligned_cols=102 Identities=8% Similarity=0.042 Sum_probs=73.4
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEc--CCCce-----eEEecCCCCCCeeEEEEcCCc---eeeeCCC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDI--RADKP-----LRVKDHMYGLPIRDIKFHDNY---VLSMDSS 92 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDl--Rs~~p-----l~~~~h~~~~pI~sI~F~~d~---l~Ssdd~ 92 (248)
...+.++++|++..++.+.+.. +.|..||+ .++.. +.... ........+++++++ ++....+
T Consensus 149 ~~pngi~~spdg~~lyv~~~~~-------~~i~~~~~d~~~G~~~~~~~~~~~~-~~~~~p~g~~~d~~G~lwva~~~~~ 220 (297)
T 3g4e_A 149 DISNGLDWSLDHKIFYYIDSLS-------YSVDAFDYDLQTGQISNRRSVYKLE-KEEQIPDGMCIDAEGKLWVACYNGG 220 (297)
T ss_dssp SBEEEEEECTTSCEEEEEEGGG-------TEEEEEEECTTTCCEEEEEEEEECC-GGGCEEEEEEEBTTSCEEEEEETTT
T ss_pred ccccceEEcCCCCEEEEecCCC-------CcEEEEeccCCCCcccCcEEEEECC-CCCCCCCeeEECCCCCEEEEEcCCC
Confidence 3568899999887776665543 38999998 44432 11111 111346789999987 3344677
Q ss_pred eEEEEECCCCCEEEEeecCCCCCeeEEEEe-CCCCEEEEEeC
Q psy2083 93 VVKIWSKDNGSLFTCIESGDQTQFNNLCHI-PESGMMFIANE 133 (248)
Q Consensus 93 ~IKIWD~~tGk~~~tie~~h~~~In~l~~~-pdsgll~sa~e 133 (248)
.|..||.++|+.+..+.. +...+++++|. ||++.|++++.
T Consensus 221 ~v~~~d~~tG~~~~~i~~-p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 221 RVIRLDPVTGKRLQTVKL-PVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEECTTTCCEEEEEEC-SSSBEEEEEEESGGGCEEEEEEB
T ss_pred EEEEEcCCCceEEEEEEC-CCCCceEEEEeCCCCCEEEEEcC
Confidence 899999999999999987 24689999998 89888877764
No 196
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.02 E-value=0.00019 Score=62.22 Aligned_cols=127 Identities=13% Similarity=0.109 Sum_probs=79.7
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeE---EecCCCCCCeeEEEEc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLR---VKDHMYGLPIRDIKFH 82 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~---~~~h~~~~pI~sI~F~ 82 (248)
+++.+|+..... . ....+.++|+|++..++.+..... ....+.|..||+..+. +. ............+.++
T Consensus 174 ~d~~~g~~~~~~-~--~~~p~gl~~spdg~~lyv~~~~~~--~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d 247 (305)
T 3dr2_A 174 LPPDGSPLQRMA-D--LDHPNGLAFSPDEQTLYVSQTPEQ--GHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVD 247 (305)
T ss_dssp ECSSSCCCEEEE-E--ESSEEEEEECTTSSEEEEEECCC-----CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEEC
T ss_pred EcCCCCcEEEEe-c--CCCCcceEEcCCCCEEEEEecCCc--CCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEEC
Confidence 344445543332 2 245688999998876776655410 0001379999998654 21 1111111234678899
Q ss_pred CCc-eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 83 DNY-VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 83 ~d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+++ |..+..+.|.+||. +|+.+..+.. +..+++++|.|+++.|++++.+ .+..+++
T Consensus 248 ~~G~lwv~~~~gv~~~~~-~g~~~~~~~~--~~~~~~~~f~~d~~~L~it~~~-~l~~~~~ 304 (305)
T 3dr2_A 248 RGGWLWSSSGTGVCVFDS-DGQLLGHIPT--PGTASNCTFDQAQQRLFITGGP-CLWMLPL 304 (305)
T ss_dssp TTSCEEECCSSEEEEECT-TSCEEEEEEC--SSCCCEEEECTTSCEEEEEETT-EEEEEEC
T ss_pred CCCCEEEecCCcEEEECC-CCCEEEEEEC--CCceeEEEEeCCCCEEEEEcCC-eEEEEEC
Confidence 888 44444456999999 5899988886 4468899999999988888875 3444443
No 197
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.94 E-value=6.3e-05 Score=73.77 Aligned_cols=115 Identities=6% Similarity=0.027 Sum_probs=75.3
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCC---------
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSS--------- 92 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~--------- 92 (248)
.+....|+||+..++.++++++ +...+|++||+.+++.+....+. ..+.+++|+||. +.++.++
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G---~e~~~i~v~dl~tg~~~~~~~~~--~~~~~~~wspD~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGG---SDWRTVKFVGVADGKPLADELKW--VKFSGLAWLGNDALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETT---CSEEEEEEEETTTCCEEEEEEEE--EESCCCEESTTSEEEEEECCCC--------
T ss_pred EEEeEEECCCCCEEEEEEcCCC---CceEEEEEEECCCCCCCCccCCC--ceeccEEEECCCEEEEEEecCccccccccc
Confidence 5678899998887766554421 11137999999999875532221 234678999985 4444333
Q ss_pred -----eEEEEECCCCCE--EEEeec-CCCCCeeEEEEeCCCCEEEEEeCCC-----eEEEEEcC
Q psy2083 93 -----VVKIWSKDNGSL--FTCIES-GDQTQFNNLCHIPESGMMFIANENK-----KILTYYIP 143 (248)
Q Consensus 93 -----~IKIWD~~tGk~--~~tie~-~h~~~In~l~~~pdsgll~sa~ed~-----~I~~w~Ip 143 (248)
.|.+|+..++.. ...++. .++..+.++.++|||..|+..+.++ .|.+|++.
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~ 302 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVT 302 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEE
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECC
Confidence 499999988762 223332 1223578999999999888777543 77777764
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.91 E-value=0.00098 Score=55.86 Aligned_cols=126 Identities=9% Similarity=-0.002 Sum_probs=78.2
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|.. |+........+...+..+++.+++. +..+...+ |.|..||.. ++............+.+|.+++++
T Consensus 41 ~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~-------~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g 110 (299)
T 2z2n_A 41 INLD-GKITEYPLPTPDAKVMCLTISSDGE-VWFTENAA-------NKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNG 110 (299)
T ss_dssp ECTT-CCEEEEECSSTTCCEEEEEECTTSC-EEEEETTT-------TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS
T ss_pred EcCC-CCeEEecCCcccCceeeEEECCCCC-EEEeCCCC-------CeEEEECCC-CcEEEEeCCCcCCCceeeEECCCC
Confidence 4554 5543332121235677888877654 44444422 379999986 332111111123568999999987
Q ss_pred --eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 86 --VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 86 --l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
.++ ..++.|.+||. +|+......+.+...++++++.|+|.+.++...++.|..|+.
T Consensus 111 ~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 169 (299)
T 2z2n_A 111 DIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE 169 (299)
T ss_dssp CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC
Confidence 333 35778999999 676543322212457899999999988877777788888864
No 199
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.88 E-value=0.00031 Score=65.19 Aligned_cols=128 Identities=9% Similarity=0.018 Sum_probs=84.0
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCc-e-eeeecCCeeEEEEcCCCceeEEecCCC------CCCe
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK-K-ILTYYIPAFYLYDIRADKPLRVKDHMY------GLPI 76 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~-~-~~~~~~G~V~LwDlRs~~pl~~~~h~~------~~pI 76 (248)
-+|..+++.+..+..+ ... .+.++||+..+++++... + .-|..+++|.+||..+.+++....-.. +..-
T Consensus 63 ViD~~t~~v~~~I~vG-~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P 139 (386)
T 3sjl_D 63 VIDGEAGRVIGMIDGG-FLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYP 139 (386)
T ss_dssp EEETTTTEEEEEEEEC-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCG
T ss_pred EEECCCCeEEEEEECC-CCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCC
Confidence 3788899999999876 233 499999999888776310 0 000012389999999998876542211 1234
Q ss_pred eEEEEcCCc---eeee--CCCeEEEEECCCCCEEEEeecCCCCC--e---e---EEEEeCCCCEEEEEeCC-CeE
Q psy2083 77 RDIKFHDNY---VLSM--DSSVVKIWSKDNGSLFTCIESGDQTQ--F---N---NLCHIPESGMMFIANEN-KKI 137 (248)
Q Consensus 77 ~sI~F~~d~---l~Ss--dd~~IKIWD~~tGk~~~tie~~h~~~--I---n---~l~~~pdsgll~sa~ed-~~I 137 (248)
..+.|+||+ .++. .++.|.++|..+++.+.++.. +.. + . -+++++||.++++..++ +++
T Consensus 140 ~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v--~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 140 WMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV--PDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp GGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC--CSEEEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred ceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC--CCcceeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 579999998 3343 378999999999999999974 221 0 0 13555666666665544 444
No 200
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.88 E-value=0.00019 Score=69.77 Aligned_cols=135 Identities=9% Similarity=0.062 Sum_probs=83.6
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCcee--------eeecCCeeEEEEcCCCce--eEEe-cCCCCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKI--------LTYYIPAFYLYDIRADKP--LRVK-DHMYGL 74 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~--------~~~~~G~V~LwDlRs~~p--l~~~-~h~~~~ 74 (248)
+|..+|+.......+ ..+..++|+||+..++.++.+..- -......|.+||+.++.. ..+. ...+..
T Consensus 156 ~d~~tg~~~~~~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~ 233 (710)
T 2xdw_A 156 MKVDGAKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPK 233 (710)
T ss_dssp EETTTTEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTT
T ss_pred EECCCCCCCcccccC--cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCe
Confidence 456667766532222 235678999988877776655310 000112499999998752 2332 222335
Q ss_pred CeeEEEEcCCc---eeeeC-----CCeEEEEECCC------CC-EEEEeecCCCCCeeEEEEeCCCCEEEEEeCC----C
Q psy2083 75 PIRDIKFHDNY---VLSMD-----SSVVKIWSKDN------GS-LFTCIESGDQTQFNNLCHIPESGMMFIANEN----K 135 (248)
Q Consensus 75 pI~sI~F~~d~---l~Ssd-----d~~IKIWD~~t------Gk-~~~tie~~h~~~In~l~~~pdsgll~sa~ed----~ 135 (248)
.+.++.|+||+ ++++. +..|.+||..+ |+ .+..+.+ +...+.. .|+|+|+.|+..+.. .
T Consensus 234 ~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~-~~~~~~~-~~s~dg~~l~~~s~~~~~~~ 311 (710)
T 2xdw_A 234 WMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID-NFEGEYD-YVTNEGTVFTFKTNRHSPNY 311 (710)
T ss_dssp CEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC-SSSSCEE-EEEEETTEEEEEECTTCTTC
T ss_pred EEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC-CCCcEEE-EEeccCCEEEEEECCCCCCC
Confidence 67899999998 33332 56899999987 54 4666766 2445544 588999877766543 3
Q ss_pred eEEEEEcCC
Q psy2083 136 KILTYYIPS 144 (248)
Q Consensus 136 ~I~~w~Ip~ 144 (248)
+|.+|++..
T Consensus 312 ~l~~~d~~~ 320 (710)
T 2xdw_A 312 RLINIDFTD 320 (710)
T ss_dssp EEEEEETTS
T ss_pred EEEEEeCCC
Confidence 588887654
No 201
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.84 E-value=0.00039 Score=57.97 Aligned_cols=110 Identities=5% Similarity=-0.004 Sum_probs=75.1
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee-eCCCeEEEEEC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIWSK 99 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD~ 99 (248)
..+..+++.+++ .++.+...+ +.|.+||..+....... ......+..|++++++ .++ ..++.|.+||.
T Consensus 108 ~~p~~i~~~~~g-~l~v~~~~~-------~~i~~~~~~~~~~~~~~-~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 108 NYPEGLAVDTQG-AVYVADRGN-------NRVVKLAAGSKTQTVLP-FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEA 178 (270)
T ss_dssp SSEEEEEECTTC-CEEEEEGGG-------TEEEEECTTCCSCEECC-CCSCCSCCCEEECTTCCEEEEEGGGTEEEEECT
T ss_pred CCCcceEECCCC-CEEEEECCC-------CEEEEEECCCceeEeec-cccCCCceeEEEeCCCCEEEEECCCCEEEEEec
Confidence 567888888855 455554432 37999987765443322 1111357899999987 333 45789999999
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
.++........ +...++++++.|+|.+.++...++.|..|+.
T Consensus 179 ~~~~~~~~~~~-~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~ 220 (270)
T 1rwi_B 179 ESNNQVVLPFT-DITAPWGIAVDEAGTVYVTEHNTNQVVKLLA 220 (270)
T ss_dssp TTCCEEECCCS-SCCSEEEEEECTTCCEEEEETTTSCEEEECT
T ss_pred CCCceEeeccc-CCCCceEEEECCCCCEEEEECCCCcEEEEcC
Confidence 87765544333 1367889999999977777777889999975
No 202
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.84 E-value=0.00017 Score=66.86 Aligned_cols=112 Identities=12% Similarity=0.095 Sum_probs=80.8
Q ss_pred EEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eee----------CCCeE
Q psy2083 28 LCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSM----------DSSVV 94 (248)
Q Consensus 28 ~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ss----------dd~~I 94 (248)
....|++..++++.... ...+++|.+.|..+.+.+.....+. .| . +.++||+ + +++ .++.|
T Consensus 38 ~~~~pd~~~vyV~~~~~---~~~~~~V~ViD~~t~~v~~~I~vG~-~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~V 111 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAH---FAAVTQQFVIDGEAGRVIGMIDGGF-LP-N-PVVADDGSFIAHASTVFSRIARGERTDYV 111 (386)
T ss_dssp CCCCCCTTEEEEEECGG---GCSSEEEEEEETTTTEEEEEEEECS-SC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcc---cCCCCEEEEEECCCCeEEEEEECCC-CC-c-EEECCCCCEEEEEcccccccccCCCCCEE
Confidence 34457777787776530 0012489999999999887765443 35 4 9999998 3 332 36789
Q ss_pred EEEECCCCCEEEEeecCC------CCCeeEEEEeCCCCEEEEEeC--CCeEEEEEcCCC
Q psy2083 95 KIWSKDNGSLFTCIESGD------QTQFNNLCHIPESGMMFIANE--NKKILTYYIPSL 145 (248)
Q Consensus 95 KIWD~~tGk~~~tie~~h------~~~In~l~~~pdsgll~sa~e--d~~I~~w~Ip~l 145 (248)
.+||..+++.+.++.... ......++|+|||+.+++++. ++.|.++|+...
T Consensus 112 sviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~ 170 (386)
T 3sjl_D 112 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK 170 (386)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred EEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCC
Confidence 999999999999987410 024667999999999999985 578999986553
No 203
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.83 E-value=0.00069 Score=59.72 Aligned_cols=126 Identities=5% Similarity=-0.044 Sum_probs=88.0
Q ss_pred cCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee
Q psy2083 10 KGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL 87 (248)
Q Consensus 10 ~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~ 87 (248)
+.+.++++..+.......+.|.++ |.++.+++.. ..++|..+|+.+++.+....-.....--.+.++.+. ++
T Consensus 8 ~~~vv~~~p~~~~~f~~Gl~~~~d-g~Lyvstg~~-----~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~ 81 (266)
T 2iwa_A 8 IVEVLNEFPHDPYAFTQGLVYAEN-DTLFESTGLY-----GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQV 81 (266)
T ss_dssp EEEEEEEEECCTTCCEEEEEECST-TEEEEEECST-----TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEE
T ss_pred CceEEEEEECCCCCCcccEEEeCC-CeEEEECCCC-----CCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEE
Confidence 567888887653345678999887 5777655421 024899999999988776432211223467777655 44
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+-.++.|-++|..+++.+.++.. . .-....+++||+.+++++.+++|.+.+...
T Consensus 82 t~~~~~v~viD~~t~~v~~~i~~--g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t 135 (266)
T 2iwa_A 82 VWLKNIGFIYDRRTLSNIKNFTH--Q-MKDGWGLATDGKILYGSDGTSILYEIDPHT 135 (266)
T ss_dssp ETTCSEEEEEETTTTEEEEEEEC--C-SSSCCEEEECSSSEEEECSSSEEEEECTTT
T ss_pred EecCCEEEEEECCCCcEEEEEEC--C-CCCeEEEEECCCEEEEECCCCeEEEEECCC
Confidence 45689999999999999999975 2 111244668998888888888998888544
No 204
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.82 E-value=0.00031 Score=60.84 Aligned_cols=104 Identities=6% Similarity=0.081 Sum_probs=69.5
Q ss_pred eCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeE-EEEcCCc--eeeeCCCeEEEEECCCCCEEEE
Q psy2083 31 IPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRD-IKFHDNY--VLSMDSSVVKIWSKDNGSLFTC 107 (248)
Q Consensus 31 ~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~s-I~F~~d~--l~Ssdd~~IKIWD~~tGk~~~t 107 (248)
+|++..++.++.+..-.....+.|.+|| ++++.... ..+...|.+ +.|+ ++ +++++++.++|| ..+|+....
T Consensus 223 spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~-~~~~~~~~~~~~~s-dg~~~~~~~~~~~~l~-~~~g~~~~~ 297 (347)
T 2gop_A 223 DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL-DEVDRGVGQAKIKD-GKVYFTLFEEGSVNLY-IWDGEIKPI 297 (347)
T ss_dssp EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESS-TTCCSEEEEEEEET-TEEEEEEEETTEEEEE-EESSSEEEE
T ss_pred CCCCCEEEEEEccccCCccccceEEEEC--CCceEecc-ccCCcccCCccEEc-CcEEEEEecCCcEEEE-EcCCceEEE
Confidence 8888777766544210011124788888 55543332 233467886 9999 87 344678899999 887776444
Q ss_pred eecCCCCCeeEEEEeCCCCEEEEEeCCCeE-EEEEcC
Q psy2083 108 IESGDQTQFNNLCHIPESGMMFIANENKKI-LTYYIP 143 (248)
Q Consensus 108 ie~~h~~~In~l~~~pdsgll~sa~ed~~I-~~w~Ip 143 (248)
+.. ...|.+++++| +++++++.+.+. .+|.+.
T Consensus 298 ~~~--~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 298 AKG--RHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp ECS--SSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred ecC--CCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 433 67899999999 788888877665 777764
No 205
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.79 E-value=0.00059 Score=59.12 Aligned_cols=110 Identities=12% Similarity=0.098 Sum_probs=72.5
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCC---CCeeEEEEcCCc-eeeeC-------
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYG---LPIRDIKFHDNY-VLSMD------- 90 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~---~pI~sI~F~~d~-l~Ssd------- 90 (248)
...++.+++.+++. ++++.... +.|.+||.. ++......+..+ ..++++.+++++ +.-+|
T Consensus 85 ~~~~~gl~~d~dG~-l~v~~~~~-------~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~ 155 (305)
T 3dr2_A 85 TAFTNGNAVDAQQR-LVHCEHGR-------RAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRK 155 (305)
T ss_dssp CSCEEEEEECTTSC-EEEEETTT-------TEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSC
T ss_pred CCccceeeECCCCC-EEEEECCC-------CEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccc
Confidence 35678888888655 55554432 278999986 543222221111 246789999998 33221
Q ss_pred ------------CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC------CeEEEEEcC
Q psy2083 91 ------------SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN------KKILTYYIP 143 (248)
Q Consensus 91 ------------d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed------~~I~~w~Ip 143 (248)
.+.|..||..+|+..... . ....|.++|+||+..|+++... ..|..|++.
T Consensus 156 ~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~--~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~ 223 (305)
T 3dr2_A 156 PSQGCPADPELAHHSVYRLPPDGSPLQRMA-D--LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWR 223 (305)
T ss_dssp GGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E--ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEE
T ss_pred cccccccccccCCCeEEEEcCCCCcEEEEe-c--CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEec
Confidence 246778888778755443 3 4667899999999988777665 689999864
No 206
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.79 E-value=0.0021 Score=53.87 Aligned_cols=126 Identities=7% Similarity=-0.016 Sum_probs=78.3
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
++.. |+............+..+++.+++. ++.+...+ +.|..||. +++............+..|.+++++
T Consensus 130 ~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~-------~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g 199 (300)
T 2qc5_A 130 LTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTENQN-------NSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDG 199 (300)
T ss_dssp ECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEEEETTT-------TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS
T ss_pred ECCC-CCEEEccCCCCCCCceeEEECCCCC-EEEEecCC-------CeEEEECC-CCcEEEeeCCCCCCCcceEEECCCC
Confidence 4554 5544332221135677888777655 55554432 37999998 5554433221222467899999887
Q ss_pred --eee-eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 86 --VLS-MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 86 --l~S-sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
.++ ...+.|.+||. +|+......+.+...+.++++.|+|.+.++...++.|..|+.
T Consensus 200 ~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 200 ALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp SEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 333 35678999998 576544322212467889999999886666656788888864
No 207
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.78 E-value=0.00065 Score=57.80 Aligned_cols=126 Identities=12% Similarity=0.102 Sum_probs=78.9
Q ss_pred cchhcCceeEEEe---cCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecC---CCCCCeeE
Q psy2083 6 LRQDKGSLFTCIE---SGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDH---MYGLPIRD 78 (248)
Q Consensus 6 ~~~~~G~~~~~~~---~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h---~~~~pI~s 78 (248)
+|..+|+...... .++...+..+++.+++|.++.++..+ .|..||.. ++.... ... .....+++
T Consensus 51 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~--------~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~ 121 (314)
T 1pjx_A 51 IDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL--------GLLVVQTD-GTFEEIAKKDSEGRRMQGCND 121 (314)
T ss_dssp ECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT--------EEEEEETT-SCEEECCSBCTTSCBCBCCCE
T ss_pred EeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCC--------CEEEEeCC-CCEEEEEeccCCCccccCCcC
Confidence 4555666543322 01125678888888746666655543 58899998 654333 211 11235889
Q ss_pred EEEcCCc--eee-eCC---------------CeEEEEECCCCCEEEEeecCCCCCeeEEEEe----CCCCEEEEE-eCCC
Q psy2083 79 IKFHDNY--VLS-MDS---------------SVVKIWSKDNGSLFTCIESGDQTQFNNLCHI----PESGMMFIA-NENK 135 (248)
Q Consensus 79 I~F~~d~--l~S-sdd---------------~~IKIWD~~tGk~~~tie~~h~~~In~l~~~----pdsgll~sa-~ed~ 135 (248)
|.+++++ .++ ..+ +.|..||.. |+....... ....+.++++ |+++.|+++ ..++
T Consensus 122 i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~~~~~i~~~~~~d~dg~~l~v~~~~~~ 198 (314)
T 1pjx_A 122 CAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA--FQFPNGIAVRHMNDGRPYQLIVAETPTK 198 (314)
T ss_dssp EEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE--ESSEEEEEEEECTTSCEEEEEEEETTTT
T ss_pred EEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC--CCCcceEEEecccCCCCCEEEEEECCCC
Confidence 9999987 333 333 467777776 665444433 4567899999 999766555 5678
Q ss_pred eEEEEEcC
Q psy2083 136 KILTYYIP 143 (248)
Q Consensus 136 ~I~~w~Ip 143 (248)
.|..|++.
T Consensus 199 ~i~~~~~~ 206 (314)
T 1pjx_A 199 KLWSYDIK 206 (314)
T ss_dssp EEEEEEEE
T ss_pred eEEEEECC
Confidence 99999864
No 208
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.77 E-value=0.00063 Score=60.23 Aligned_cols=116 Identities=9% Similarity=0.100 Sum_probs=74.4
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC-----CCCCCeeEEEEcCC-c--eee-e---
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH-----MYGLPIRDIKFHDN-Y--VLS-M--- 89 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h-----~~~~pI~sI~F~~d-~--l~S-s--- 89 (248)
-..+..+++.+++ .|+.+..... .--.+.|..||+.+++.+..... .....++.|.|+++ + .++ +
T Consensus 66 ~~~p~gv~~d~~g-~L~v~D~g~~--~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 66 FDTVLGIKSDGNG-IVWMLDNGNQ--SKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CSCEEEEEECSSS-EEEEEECHHH--HTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred eeEeeEEEEcCCC-cEEEEcCCCC--cCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence 3567888888864 4554432100 00013799999999876554321 11234689999975 3 233 3
Q ss_pred CCCeEEEEECCCCCEEEEeecCCC-----------------------------CCeeEEEEeCCCCEEEEEeCCC-eEEE
Q psy2083 90 DSSVVKIWSKDNGSLFTCIESGDQ-----------------------------TQFNNLCHIPESGMMFIANENK-KILT 139 (248)
Q Consensus 90 dd~~IKIWD~~tGk~~~tie~~h~-----------------------------~~In~l~~~pdsgll~sa~ed~-~I~~ 139 (248)
.++.|.+||..+|+....+.. |. ..+|.++++|||..|+++..++ ++..
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~-~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~ 221 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQG-YPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYR 221 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTT-CTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEE
T ss_pred CCCeEEEEECCCCCEEEEecC-CCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEE
Confidence 567999999999987766543 11 2368999999999888887665 5544
Q ss_pred EE
Q psy2083 140 YY 141 (248)
Q Consensus 140 w~ 141 (248)
++
T Consensus 222 ~~ 223 (343)
T 2qe8_A 222 IK 223 (343)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.75 E-value=0.0014 Score=56.49 Aligned_cols=122 Identities=6% Similarity=-0.010 Sum_probs=76.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCC---CCCCeeEEEEc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHM---YGLPIRDIKFH 82 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~---~~~pI~sI~F~ 82 (248)
++..+|+. ..+... ..+..+++.+++. ++++..+ .|.+||..+++........ ....++.+.++
T Consensus 40 ~d~~~~~~-~~~~~~--~~~~~i~~~~dG~-l~v~~~~---------~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d 106 (297)
T 3g4e_A 40 WDSFTKQV-QRVTMD--APVSSVALRQSGG-YVATIGT---------KFCALNWKEQSAVVLATVDNDKKNNRFNDGKVD 106 (297)
T ss_dssp EETTTCCE-EEEECS--SCEEEEEEBTTSS-EEEEETT---------EEEEEETTTTEEEEEEECCTTCSSEEEEEEEEC
T ss_pred EECCCCcE-EEEeCC--CceEEEEECCCCC-EEEEECC---------eEEEEECCCCcEEEEEecCCCCCCCCCCCEEEC
Confidence 45555554 334432 5688888888766 5555433 6899999987543322221 12347899999
Q ss_pred CCc--eeee-C---------CCeEEEEECCC-CCEEEEeecCCCCCeeEEEEeCCCCEEEEE-eCCCeEEEEEc
Q psy2083 83 DNY--VLSM-D---------SSVVKIWSKDN-GSLFTCIESGDQTQFNNLCHIPESGMMFIA-NENKKILTYYI 142 (248)
Q Consensus 83 ~d~--l~Ss-d---------d~~IKIWD~~t-Gk~~~tie~~h~~~In~l~~~pdsgll~sa-~ed~~I~~w~I 142 (248)
+++ .+++ . ...-+||.... |+....... ....|.++|+||+..|+.+ +.+++|..|++
T Consensus 107 ~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~--~~~pngi~~spdg~~lyv~~~~~~~i~~~~~ 178 (297)
T 3g4e_A 107 PAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQ--VDISNGLDWSLDHKIFYYIDSLSYSVDAFDY 178 (297)
T ss_dssp TTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEE--ESBEEEEEECTTSCEEEEEEGGGTEEEEEEE
T ss_pred CCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeec--cccccceEEcCCCCEEEEecCCCCcEEEEec
Confidence 998 3332 2 23345666553 444433333 4567899999999866554 55789999987
No 210
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.74 E-value=3.8e-06 Score=76.18 Aligned_cols=130 Identities=8% Similarity=0.105 Sum_probs=61.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCee-EEEEcCC
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIR-DIKFHDN 84 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~-sI~F~~d 84 (248)
+|+.+|+++-.+.. +.+.+..+.+++..+++++.+ |.|..||..+++.++.........+. +..+..+
T Consensus 24 ~d~~tG~~~W~~~~---~~~~s~p~~~~g~~~v~~s~d--------g~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~ 92 (369)
T 2hz6_A 24 VSKRTGSIKWTLKE---DPVLQVPTHVEEPAFLPDPND--------GSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSD 92 (369)
T ss_dssp EETTTCCEEEEEEC---CCSCCCC-----CCEEECTTT--------CCEEEC-----CCSEECSCCHHHHHTTCSCC---
T ss_pred EECCCCCEEEEecC---CCceecceEcCCCEEEEeCCC--------CEEEEEECCCCceeeeeeccCccccccCceEecC
Confidence 68889998887765 245555555554445444444 48999999999877665322111111 1111123
Q ss_pred c--eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCccc
Q psy2083 85 Y--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCG 153 (248)
Q Consensus 85 ~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs 153 (248)
+ ++++.++.|..||.++|+.+..+.. ... ..++|+++.+++++.|+.|..|+... -...|-.
T Consensus 93 ~~v~~g~~dg~v~a~D~~tG~~~w~~~~--~~~---~~~~p~~~~v~~~~~dg~v~a~d~~t--G~~~W~~ 156 (369)
T 2hz6_A 93 GILYMGKKQDIWYVIDLLTGEKQQTLSS--AFA---DSLSPSTSLLYLGRTEYTITMYDTKT--RELRWNA 156 (369)
T ss_dssp --CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSS--SSCCCEE
T ss_pred CEEEEEeCCCEEEEEECCCCcEEEEecC--CCc---ccccccCCEEEEEecCCEEEEEECCC--CCEEEeE
Confidence 3 4456788999999999999888876 222 35668999999999999999998654 2456753
No 211
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.72 E-value=0.0008 Score=66.05 Aligned_cols=96 Identities=9% Similarity=0.067 Sum_probs=67.8
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEE
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMM 128 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll 128 (248)
|.|..||+++++.++...++ .++.+..+..++ ++++.++.+++||.++|+.+.++..++...-+-+.+.++|..+
T Consensus 457 g~l~A~D~~tG~~~W~~~~~--~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~ 534 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHV--SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQY 534 (677)
T ss_dssp EEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred cEEEEEeCCCCcEEeecCCC--CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEE
Confidence 78999999999998887654 566665565543 4456799999999999999999985212222335666888655
Q ss_pred EEE-eC----------------CCeEEEEEcCCCCCCC
Q psy2083 129 FIA-NE----------------NKKILTYYIPSLGPAP 149 (248)
Q Consensus 129 ~sa-~e----------------d~~I~~w~Ip~lG~aP 149 (248)
++. +. .+.+..|.+|.-...|
T Consensus 535 v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~~a~~~ 572 (677)
T 1kb0_A 535 VSVAVGWGGVYGLAARATERQGPGTVYTFVVGGKARMP 572 (677)
T ss_dssp EEEEECCCHHHHHHCCSCSCCCCCEEEEEEETCBCCCC
T ss_pred EEEeccCCccccccccccccCCCCeEEEEecccccccc
Confidence 543 22 3688999988544444
No 212
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.71 E-value=0.00099 Score=60.56 Aligned_cols=130 Identities=13% Similarity=0.037 Sum_probs=84.4
Q ss_pred cccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCc-ee-eeecCCeeEEEEcCCCceeEEecCC-C-----CCC
Q psy2083 4 QELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK-KI-LTYYIPAFYLYDIRADKPLRVKDHM-Y-----GLP 75 (248)
Q Consensus 4 ~~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~-~~-~~~~~G~V~LwDlRs~~pl~~~~h~-~-----~~p 75 (248)
.-+|..+|+.+.++..+ ... .++++||+..++.++... .. -|..+++|.+||+.+.+++....-. . +..
T Consensus 50 ~v~D~~t~~~~~~i~~g-~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~ 126 (373)
T 2mad_H 50 WVLDAGSGSILGHVNGG-FLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPY 126 (373)
T ss_pred EEEECCCCeEEEEecCC-CCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCC
Confidence 34678899999998876 233 899999999888886310 00 0011248999999988776543211 0 112
Q ss_pred eeEEEEcCCc---eeee-C-CCeEEEEECCCCCEEEE-eecCCCCCeeEEEEeCCC-CEEEEEeCCCeEEEEEc
Q psy2083 76 IRDIKFHDNY---VLSM-D-SSVVKIWSKDNGSLFTC-IESGDQTQFNNLCHIPES-GMMFIANENKKILTYYI 142 (248)
Q Consensus 76 I~sI~F~~d~---l~Ss-d-d~~IKIWD~~tGk~~~t-ie~~h~~~In~l~~~pds-gll~sa~ed~~I~~w~I 142 (248)
-..+.|+||+ ++++ . ++.|-++| .+++.+.+ +.. ... +.+.|++ ..+++.+.|+++..++.
T Consensus 127 p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~--~~~---~~~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 127 SWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS--PTC---YHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred ccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC--Cce---EEEEeCCCceEEEEcCCCCEEEEEC
Confidence 3479999997 3333 3 57899999 99999888 654 222 3455655 34445556676666655
No 213
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.71 E-value=0.0017 Score=57.01 Aligned_cols=102 Identities=9% Similarity=0.121 Sum_probs=69.7
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC--CC-ce-----eEEecCCCCCCeeEEEEcCCc---eeeeCC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR--AD-KP-----LRVKDHMYGLPIRDIKFHDNY---VLSMDS 91 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR--s~-~p-----l~~~~h~~~~pI~sI~F~~d~---l~Ssdd 91 (248)
...+.++++|++..++.+.... +.|.+||+. ++ .. +.... ........+.+.+++ +++..+
T Consensus 179 ~~~~~i~~s~dg~~lyv~~~~~-------~~I~~~d~~~~~Gl~~~~~~~~~~~~-~~~~~p~gi~~d~~G~lwva~~~~ 250 (326)
T 2ghs_A 179 SIPNSICFSPDGTTGYFVDTKV-------NRLMRVPLDARTGLPTGKAEVFIDST-GIKGGMDGSVCDAEGHIWNARWGE 250 (326)
T ss_dssp SSEEEEEECTTSCEEEEEETTT-------CEEEEEEBCTTTCCBSSCCEEEEECT-TSSSEEEEEEECTTSCEEEEEETT
T ss_pred cccCCeEEcCCCCEEEEEECCC-------CEEEEEEcccccCCcccCceEEEECC-CCCCCCCeeEECCCCCEEEEEeCC
Confidence 3567888888877666554433 389999986 55 21 21221 112345789999887 333356
Q ss_pred CeEEEEECCCCCEEEEeecCCCCCeeEEEEe-CCCCEEEEEeCC
Q psy2083 92 SVVKIWSKDNGSLFTCIESGDQTQFNNLCHI-PESGMMFIANEN 134 (248)
Q Consensus 92 ~~IKIWD~~tGk~~~tie~~h~~~In~l~~~-pdsgll~sa~ed 134 (248)
+.|.+||. +|+.+..+.. +...+.+++|. ||++.|++++..
T Consensus 251 ~~v~~~d~-~g~~~~~i~~-~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 251 GAVDRYDT-DGNHIARYEV-PGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp TEEEEECT-TCCEEEEEEC-SCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CEEEEECC-CCCEEEEEEC-CCCCcEEEEEecCCCCEEEEEecC
Confidence 78999999 6888888876 25579999998 898877666544
No 214
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.68 E-value=0.0037 Score=52.27 Aligned_cols=110 Identities=8% Similarity=-0.025 Sum_probs=72.0
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee-eCCCeEEEEEC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS-MDSSVVKIWSK 99 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S-sdd~~IKIWD~ 99 (248)
..+..+++.+++ .++.+...+ +.|..||.. ++............+.++++.+++ .++ ..++.|..||.
T Consensus 62 ~~~~~i~~~~~g-~l~v~~~~~-------~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 132 (300)
T 2qc5_A 62 AKVMCLIVSSLG-DIWFTENGA-------NKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTA 132 (300)
T ss_dssp CCEEEEEECTTS-CEEEEETTT-------TEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CcceeEEECCCC-CEEEEecCC-------CeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECC
Confidence 567777777655 455544432 379999988 544322221123568999999887 333 34778999999
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
. |+......+.....++++++.|+|.+.++...++.|..|+.
T Consensus 133 ~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 133 D-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN 174 (300)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred C-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC
Confidence 8 77653222211457899999999997666666788888864
No 215
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.58 E-value=0.00062 Score=66.08 Aligned_cols=116 Identities=5% Similarity=-0.053 Sum_probs=70.9
Q ss_pred eEEEEeCCCCcEEEeecCceee-----eecCCeeEEEEcCCCce--eEEe-cCCCCCCeeEEEEcCCc---eeeeCCC--
Q psy2083 26 NNLCHIPESGMMFIANENKKIL-----TYYIPAFYLYDIRADKP--LRVK-DHMYGLPIRDIKFHDNY---VLSMDSS-- 92 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~-----~~~~G~V~LwDlRs~~p--l~~~-~h~~~~pI~sI~F~~d~---l~Ssdd~-- 92 (248)
..++|+||+..++.++.+..-. ......|++||+.++.. ..+. ...+...+.++.|+||+ ++++.++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 5788999888777776653000 00112499999998752 2333 22333578899999998 3344333
Q ss_pred --eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC---CCeEEEEEcCC
Q psy2083 93 --VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE---NKKILTYYIPS 144 (248)
Q Consensus 93 --~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e---d~~I~~w~Ip~ 144 (248)
.|.+||..+|+ +..+.+ +...+....+ |+|+++++.+. +.+|..|++..
T Consensus 251 ~~~l~~~~~~~~~-~~~l~~-~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~ 304 (695)
T 2bkl_A 251 ENDVYWKRPGEKD-FRLLVK-GVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAK 304 (695)
T ss_dssp EEEEEEECTTCSS-CEEEEE-CSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTB
T ss_pred ceEEEEEcCCCCc-eEEeec-CCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCC
Confidence 67777766665 445554 2455555555 66665555442 47888888643
No 216
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.58 E-value=0.0013 Score=59.88 Aligned_cols=106 Identities=9% Similarity=-0.003 Sum_probs=74.1
Q ss_pred eCCCCcEEEeec-CceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeee-----------CCCeEEE
Q psy2083 31 IPESGMMFIANE-NKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSM-----------DSSVVKI 96 (248)
Q Consensus 31 ~~~~g~l~~ag~-d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ss-----------dd~~IKI 96 (248)
.|++..++++.. ... ...+|.+||..+++.+....-+. .| .+.|+||+ +..+ .+++|.+
T Consensus 29 ~~~~~~~yv~~~~~~~----~~~~v~v~D~~t~~~~~~i~~g~-~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~v 101 (373)
T 2mad_H 29 GADGRRSYINLPAHHS----AIIQQWVLDAGSGSILGHVNGGF-LP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEV 101 (373)
T ss_pred CCCCCEEEEeCCcccC----CccEEEEEECCCCeEEEEecCCC-CC--CeEECCCCCEEEEEeccccccccCCCCCeEEE
Confidence 355555666654 210 00078999999998776654442 34 99999998 3333 2678999
Q ss_pred EECCCCCEEEEeecC---C---CCCeeEEEEeCCCCEEEEEeC--CCeEEEEEcCC
Q psy2083 97 WSKDNGSLFTCIESG---D---QTQFNNLCHIPESGMMFIANE--NKKILTYYIPS 144 (248)
Q Consensus 97 WD~~tGk~~~tie~~---h---~~~In~l~~~pdsgll~sa~e--d~~I~~w~Ip~ 144 (248)
||..+++.+.++... + ......++++|||+.|++++. +..|.+++ ..
T Consensus 102 iD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t 156 (373)
T 2mad_H 102 FDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QG 156 (373)
T ss_pred EECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CC
Confidence 999999999888641 0 123457899999999999985 47899988 54
No 217
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.55 E-value=0.0053 Score=53.98 Aligned_cols=130 Identities=12% Similarity=0.164 Sum_probs=90.3
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCC-CCCC---eeEEE
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHM-YGLP---IRDIK 80 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~-~~~p---I~sI~ 80 (248)
-+|+.+++.+.++..+ ... .....+|++.++++.+++ +|.+.|..+.+.+....-+ .+.| .+.+.
T Consensus 90 viD~~t~~v~~~i~~g-~~~--g~glt~Dg~~l~vs~gs~--------~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele 158 (266)
T 2iwa_A 90 IYDRRTLSNIKNFTHQ-MKD--GWGLATDGKILYGSDGTS--------ILYEIDPHTFKLIKKHNVKYNGHRVIRLNELE 158 (266)
T ss_dssp EEETTTTEEEEEEECC-SSS--CCEEEECSSSEEEECSSS--------EEEEECTTTCCEEEEEECEETTEECCCEEEEE
T ss_pred EEECCCCcEEEEEECC-CCC--eEEEEECCCEEEEECCCC--------eEEEEECCCCcEEEEEEECCCCcccccceeEE
Confidence 4788899999998754 111 222445778888776543 8999999998765543211 1233 57888
Q ss_pred EcCCc-eee-e-CCCeEEEEECCCCCEEEEeecC------------CCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCC
Q psy2083 81 FHDNY-VLS-M-DSSVVKIWSKDNGSLFTCIESG------------DQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPS 144 (248)
Q Consensus 81 F~~d~-l~S-s-dd~~IKIWD~~tGk~~~tie~~------------h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~ 144 (248)
|. ++ +.. . .++.|-+-|+.+|+.+.++... .....|.+++.|+++.+++++ ..++|..-++..
T Consensus 159 ~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 159 YI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 88 55 333 2 5789999999999999999741 003568999999998777777 558888887765
Q ss_pred CC
Q psy2083 145 LG 146 (248)
Q Consensus 145 lG 146 (248)
..
T Consensus 238 ~~ 239 (266)
T 2iwa_A 238 VR 239 (266)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 218
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.52 E-value=0.0035 Score=57.44 Aligned_cols=112 Identities=10% Similarity=0.044 Sum_probs=75.0
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe---cCCCCC--CeeEEEEcCC-c-ee--eeCCCe
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK---DHMYGL--PIRDIKFHDN-Y-VL--SMDSSV 93 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~---~h~~~~--pI~sI~F~~d-~-l~--Ssdd~~ 93 (248)
..++.+++.|++|.++.+..+ |.|..||..++...... ..+... |.+.|+|+|+ + +. .+..+.
T Consensus 219 ~~p~~iav~p~~g~lyv~d~~--------~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~ 290 (409)
T 3hrp_A 219 GKIGAVALDETEEWLYFVDSN--------KNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSS 290 (409)
T ss_dssp SCCCBCEECTTSSEEEEECTT--------CEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTE
T ss_pred CCcEEEEEeCCCCeEEEEECC--------CcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCE
Confidence 567788888877887775443 48999999887533321 111111 3349999995 4 33 345789
Q ss_pred EEEEECCCCCEEEEeecCC--------------CCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCC
Q psy2083 94 VKIWSKDNGSLFTCIESGD--------------QTQFNNLCHIPESGMMFIAN-ENKKILTYYIPS 144 (248)
Q Consensus 94 IKIWD~~tGk~~~tie~~h--------------~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~ 144 (248)
|..||.+ |+ +..+.+.. -...+.+++.|+|.++++-. .+.+|+.|+.+.
T Consensus 291 I~~~~~~-g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~ 354 (409)
T 3hrp_A 291 VYKITPD-GE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILD 354 (409)
T ss_dssp EEEECTT-CC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTT
T ss_pred EEEEecC-CC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCC
Confidence 9999976 44 34443310 13478999999999777766 788999998653
No 219
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.51 E-value=0.0023 Score=62.74 Aligned_cols=51 Identities=10% Similarity=0.217 Sum_probs=44.1
Q ss_pred CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 92 SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 92 ~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
+.|..||..||+.+-.+.. ..++++..+.++++++++++.|+.+.+|+...
T Consensus 457 g~l~A~D~~tG~~~W~~~~--~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~t 507 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEH--VSPWNGGTLTTAGNVVFQGTADGRLVAYHAAT 507 (677)
T ss_dssp EEEEEEETTTTEEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred cEEEEEeCCCCcEEeecCC--CCCCcCcceEeCCCEEEEECCCCcEEEEECCC
Confidence 6899999999999888875 56677777888999999999999999999754
No 220
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.48 E-value=0.0013 Score=61.52 Aligned_cols=129 Identities=5% Similarity=-0.004 Sum_probs=88.5
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCce--eeeecCCeeEEEEcCCCceeEEecCC------CCCCe
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKK--ILTYYIPAFYLYDIRADKPLRVKDHM------YGLPI 76 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~--~~~~~~G~V~LwDlRs~~pl~~~~h~------~~~pI 76 (248)
-+|..+++.+..+..+ ... .+.++||+..+++++.... ..|-.++.|.++|..+.+.+....-. .+..-
T Consensus 103 VID~~t~~vv~~I~vG-~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P 179 (426)
T 3c75_H 103 VIDGSTGRILGMTDGG-FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQ 179 (426)
T ss_dssp EEETTTTEEEEEEEEC-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCG
T ss_pred EEECCCCEEEEEEECC-CCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCc
Confidence 4788999999999876 234 8999999999888763100 00011248999999999887654211 01234
Q ss_pred eEEEEcCCc---eeee-C-CCeEEEEECCCCCEEEEeecCCCCC--e------eEEEEeCCCCEEEEEeCCCeEE
Q psy2083 77 RDIKFHDNY---VLSM-D-SSVVKIWSKDNGSLFTCIESGDQTQ--F------NNLCHIPESGMMFIANENKKIL 138 (248)
Q Consensus 77 ~sI~F~~d~---l~Ss-d-d~~IKIWD~~tGk~~~tie~~h~~~--I------n~l~~~pdsgll~sa~ed~~I~ 138 (248)
..+.|+||+ .++. . ++.|-+.|..+++.+.++.. ... + .-+.+++||.++++...++++.
T Consensus 180 ~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v--~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~ 252 (426)
T 3c75_H 180 WMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV--PDCYHIFPASPTVFYMNCRDGSLARVDFADGETK 252 (426)
T ss_dssp GGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC--CSEEEEEEEETTEEEEEETTSSEEEEECCTTCCE
T ss_pred ceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc--CCceeeccCCCcEEEEEcCCCCEEEEECCCCcEE
Confidence 578999998 3343 3 68999999999999999875 221 1 1256778888777777666654
No 221
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.41 E-value=0.0011 Score=64.75 Aligned_cols=116 Identities=9% Similarity=0.104 Sum_probs=71.1
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCC-------
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDS------- 91 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd------- 91 (248)
...+..++++||+..++-+.+.+ |+...+|++||+.+++.+....+. ....+++|+ |+ +.++.+
T Consensus 128 ~~~l~~~~~SpDg~~lAy~~~~~---G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 128 TTALDQLSFSRDGRILAYSLSLA---GSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp CCEEEEEEECTTSSEEEEEEECS---SCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC----
T ss_pred cEEEEEEEECCCCCEEEEEEecC---CCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCcccccc
Confidence 34577888999887666332221 112248999999999865532211 113577899 76 444544
Q ss_pred ------CeEEEEECCCCCE--EEEeec-C-CCCCeeEEEEeCCCCEEEEEeC-C---CeEEEEEcC
Q psy2083 92 ------SVVKIWSKDNGSL--FTCIES-G-DQTQFNNLCHIPESGMMFIANE-N---KKILTYYIP 143 (248)
Q Consensus 92 ------~~IKIWD~~tGk~--~~tie~-~-h~~~In~l~~~pdsgll~sa~e-d---~~I~~w~Ip 143 (248)
..|++|++.++.. ...++. . |...+.++.++|||..|+.... + +.|.++++.
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~ 267 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLS 267 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETT
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECC
Confidence 3599999987642 223332 1 1334678999999997755442 2 467777653
No 222
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.41 E-value=1e-05 Score=73.33 Aligned_cols=91 Identities=11% Similarity=0.143 Sum_probs=50.4
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCC---
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPES--- 125 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pds--- 125 (248)
|.|..||+++++.++..... . .+.++|++ ++++.++.|..||.++|+.+.+++. . .....++.++.
T Consensus 102 g~v~a~D~~tG~~~w~~~~~--~---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~--~-~~~~~~~~~~~~~~ 173 (369)
T 2hz6_A 102 DIWYVIDLLTGEKQQTLSSA--F---ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY--F-DYAASLPEDDVDYK 173 (369)
T ss_dssp EEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCCEEEE--E-EECCBCCCCCTTCC
T ss_pred CEEEEEECCCCcEEEEecCC--C---cccccccCCEEEEEecCCEEEEEECCCCCEEEeEec--c-cccCccccCCcccc
Confidence 48999999999988876433 1 23445544 4456789999999999998766653 1 12233444443
Q ss_pred CEEEEEeCCCeEEEEEcCCCCCCCCcc
Q psy2083 126 GMMFIANENKKILTYYIPSLGPAPKWC 152 (248)
Q Consensus 126 gll~sa~ed~~I~~w~Ip~lG~aP~wc 152 (248)
+.+++++.++.|..|+... | ...|-
T Consensus 174 ~~v~~~~~dg~v~a~d~~t-G-~~~W~ 198 (369)
T 2hz6_A 174 MSHFVSNGDGLVVTVDSES-G-DVLWI 198 (369)
T ss_dssp CCEEEEETSCEEEEECTTT-C-CEEEE
T ss_pred ceEEEECCCCEEEEEECCC-C-cEEEE
Confidence 6788889999999998654 2 34564
No 223
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.41 E-value=0.0051 Score=53.96 Aligned_cols=98 Identities=10% Similarity=-0.018 Sum_probs=67.6
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCC
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDN 101 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~t 101 (248)
.....+++|+++.++.++..+ +.|..||..+++.... ... ..|.++.|++++ ++++. ..|.+||.++
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~-------~~i~~~d~~~~~~~~~-~~~--~~v~~i~~~~dg~l~v~~~-~gl~~~d~~~ 118 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILE-------RELHELHLASGRKTVH-ALP--FMGSALAKISDSKQLIASD-DGLFLRDTAT 118 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGG-------TEEEEEETTTTEEEEE-ECS--SCEEEEEEEETTEEEEEET-TEEEEEETTT
T ss_pred CCcCCeEeCCCCEEEEEECCC-------CEEEEEECCCCcEEEE-ECC--CcceEEEEeCCCeEEEEEC-CCEEEEECCC
Confidence 346788888877776665543 4899999998754322 222 579999999988 45554 4588999998
Q ss_pred CCEEEEeec--CC-CCCeeEEEEeCCCCEEEEEe
Q psy2083 102 GSLFTCIES--GD-QTQFNNLCHIPESGMMFIAN 132 (248)
Q Consensus 102 Gk~~~tie~--~h-~~~In~l~~~pdsgll~sa~ 132 (248)
|+....... .. ...++++++.|+|.+.++..
T Consensus 119 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~ 152 (326)
T 2ghs_A 119 GVLTLHAELESDLPGNRSNDGRMHPSGALWIGTM 152 (326)
T ss_dssp CCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEE
T ss_pred CcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeC
Confidence 885432221 00 13589999999999776554
No 224
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.39 E-value=0.0031 Score=57.87 Aligned_cols=128 Identities=5% Similarity=-0.025 Sum_probs=78.6
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe---cCCCCCCeeEEEE
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK---DHMYGLPIRDIKF 81 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~---~h~~~~pI~sI~F 81 (248)
.++..+|.+.+..... .... +++.++++.++++..++ .+.|.+||...+...... .......++++++
T Consensus 156 ~id~~~g~~~~~~~~~--~~~~-ia~~~~g~~l~~~d~~~------~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav 226 (409)
T 3hrp_A 156 LISVDDNKVTTVHPGF--KGGK-PAVTKDKQRVYSIGWEG------THTVYVYMKASGWAPTRIGQLGSTFSGKIGAVAL 226 (409)
T ss_dssp EEETTTTEEEEEEETC--CBCB-CEECTTSSEEEEEBSST------TCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEE
T ss_pred EEECCCCEEEEeeccC--CCCc-eeEecCCCcEEEEecCC------CceEEEEEcCCCceeEEeeeccchhcCCcEEEEE
Confidence 4566666665555543 2333 88888887777776653 127889998766432222 1112356789999
Q ss_pred cC-Cc-eeee-CCCeEEEEECCCCCEEEE----eecCCCC--CeeEEEEeCCCCEEEEE-eCCCeEEEEEc
Q psy2083 82 HD-NY-VLSM-DSSVVKIWSKDNGSLFTC----IESGDQT--QFNNLCHIPESGMMFIA-NENKKILTYYI 142 (248)
Q Consensus 82 ~~-d~-l~Ss-dd~~IKIWD~~tGk~~~t----ie~~h~~--~In~l~~~pdsgll~sa-~ed~~I~~w~I 142 (248)
+| ++ |..+ .++.|..||..++..... ..+ +.. |.+.++|+|+++.|+++ ..+.+|..|+.
T Consensus 227 ~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g-~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~ 296 (409)
T 3hrp_A 227 DETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSG-SLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITP 296 (409)
T ss_dssp CTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCS-CCCCSSCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred eCCCCeEEEEECCCcEEEEECCCCCEEEEecccccC-CCCCCccccEEEeCCCCEEEEEeCCCCEEEEEec
Confidence 99 45 3334 467899999998764322 122 111 22499999965555555 55688888864
No 225
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.39 E-value=0.012 Score=51.11 Aligned_cols=122 Identities=8% Similarity=0.013 Sum_probs=82.9
Q ss_pred ceeEEEecCCCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee
Q psy2083 12 SLFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS 88 (248)
Q Consensus 12 ~~~~~~~~~~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S 88 (248)
++++++.+......-.+.|.+ +.|+ ++|..+ ...|+.+|+.+++.+....-.....--.+.+..+. +++
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~--~~LyestG~~g------~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~lt 81 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR--GHLYESTGETG------RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLT 81 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET--TEEEEEECCTT------SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEE
T ss_pred EEEEEcCCCCccccccEEEEC--CEEEEECCCCC------CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEE
Confidence 467777554356677888775 4555 444432 24899999999988776532211112356666665 555
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
-.++.+-++|.++++.+.++.. ...-..+ .+|++.|+++..+.+|.++|-..+
T Consensus 82 w~~~~v~v~D~~tl~~~~ti~~--~~~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~ 134 (243)
T 3mbr_X 82 WRNHEGFVYDLATLTPRARFRY--PGEGWAL--TSDDSHLYMSDGTAVIRKLDPDTL 134 (243)
T ss_dssp SSSSEEEEEETTTTEEEEEEEC--SSCCCEE--EECSSCEEEECSSSEEEEECTTTC
T ss_pred eeCCEEEEEECCcCcEEEEEeC--CCCceEE--eeCCCEEEEECCCCeEEEEeCCCC
Confidence 5689999999999999999986 3322334 467888888888899999885543
No 226
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.39 E-value=0.0051 Score=54.36 Aligned_cols=120 Identities=8% Similarity=0.088 Sum_probs=82.3
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS 88 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S 88 (248)
.++++++.+......-.+.|. ++.|+.++++. |.|+.+|+.+++.+... -.....--.|.+..+. +++
T Consensus 43 ~~Vv~~~phd~~~ftqGL~~~--~~~Ly~stG~~-------g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~lt 112 (268)
T 3nok_A 43 AHIIREYPHATNAFTQGLVFH--QGHFFESTGHQ-------GTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLT 112 (268)
T ss_dssp EEEEEEEECCTTCCEEEEEEE--TTEEEEEETTT-------TEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEE
T ss_pred eEEEEEEcCCCccccceEEEE--CCEEEEEcCCC-------CEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEE
Confidence 367777765434455677765 35666555554 48999999999876655 2211122347777666 555
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
-.++.+-++|.++++.+.++.. ...-..+| +|++.|++++.+++|.++|...
T Consensus 113 w~~~~v~V~D~~Tl~~~~ti~~--~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T 164 (268)
T 3nok_A 113 WTEGLLFTWSGMPPQRERTTRY--SGEGWGLC--YWNGKLVRSDGGTMLTFHEPDG 164 (268)
T ss_dssp SSSCEEEEEETTTTEEEEEEEC--SSCCCCEE--EETTEEEEECSSSEEEEECTTT
T ss_pred ccCCEEEEEECCcCcEEEEEeC--CCceeEEe--cCCCEEEEECCCCEEEEEcCCC
Confidence 5799999999999999999986 33323444 6788888887788898888544
No 227
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.38 E-value=0.0015 Score=61.16 Aligned_cols=91 Identities=11% Similarity=0.032 Sum_probs=69.9
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee----------CCCeEEEEECCCCCEEEEeecC---C---
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM----------DSSVVKIWSKDNGSLFTCIESG---D--- 112 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss----------dd~~IKIWD~~tGk~~~tie~~---h--- 112 (248)
++|.++|+.+.+.+....-+. .| .|.|+||+ .++. .++.|.++|..+++.+.++... .
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~-~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~ 175 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGF-LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLV 175 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECS-SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CeEEEEECCCCEEEEEEECCC-CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccccc
Confidence 489999999998887765442 46 89999997 2332 3678999999999999998640 0
Q ss_pred CCCeeEEEEeCCCCEEEEEeC--CCeEEEEEcCCC
Q psy2083 113 QTQFNNLCHIPESGMMFIANE--NKKILTYYIPSL 145 (248)
Q Consensus 113 ~~~In~l~~~pdsgll~sa~e--d~~I~~w~Ip~l 145 (248)
......++|+|||+.+++++. ++.|.+.|....
T Consensus 176 g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~ 210 (426)
T 3c75_H 176 GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGK 210 (426)
T ss_dssp SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCC
Confidence 123557899999999999985 478988886653
No 228
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.36 E-value=0.0043 Score=60.93 Aligned_cols=78 Identities=6% Similarity=-0.062 Sum_probs=54.6
Q ss_pred CCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCE
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGM 127 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgl 127 (248)
+|+|..||+++++.++...+. .++..-.+...+ | +++.|+.|+.||.+||+.+-.++.++...-+-+.+..||..
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~q 531 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYV--TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQ 531 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred ceeEEEEECCCCCeEeEccCC--CCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEE
Confidence 478999999999998876554 455544454443 3 34579999999999999999988621222234667788865
Q ss_pred EEE
Q psy2083 128 MFI 130 (248)
Q Consensus 128 l~s 130 (248)
.++
T Consensus 532 yv~ 534 (689)
T 1yiq_A 532 YVT 534 (689)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 229
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.35 E-value=0.0071 Score=53.25 Aligned_cols=123 Identities=10% Similarity=0.021 Sum_probs=81.7
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEE-EeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMF-IANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL 87 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~-~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~ 87 (248)
-++++++.+......-.+.|. + +.|+ ++|.++ ...|+.+|+.+++.+....-.....--.|.+..+. ++
T Consensus 31 ~~vv~~~phd~~~ftqGL~~~-~-~~LyestG~~g------~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~l 102 (262)
T 3nol_A 31 YQIVHSYPHDTKAFTEGFFYR-N-GYFYESTGLNG------RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGL 102 (262)
T ss_dssp EEEEEEEECCTTCEEEEEEEE-T-TEEEEEEEETT------EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEE
T ss_pred eEEEEEecCCCCcccceEEEE-C-CEEEEECCCCC------CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEE
Confidence 356677755434455677776 4 4555 444432 13899999999988776543311222446776665 55
Q ss_pred eeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Q psy2083 88 SMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSL 145 (248)
Q Consensus 88 Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~l 145 (248)
+-.++.+-++|.++++.+.++.. ...=. .+.+|++.|++++.+.+|..+|-..+
T Consensus 103 tw~~~~v~v~D~~t~~~~~ti~~--~~eG~--glt~dg~~L~~SdGs~~i~~iDp~T~ 156 (262)
T 3nol_A 103 TWKNGLGFVWNIRNLRQVRSFNY--DGEGW--GLTHNDQYLIMSDGTPVLRFLDPESL 156 (262)
T ss_dssp ESSSSEEEEEETTTCCEEEEEEC--SSCCC--CEEECSSCEEECCSSSEEEEECTTTC
T ss_pred EeeCCEEEEEECccCcEEEEEEC--CCCce--EEecCCCEEEEECCCCeEEEEcCCCC
Confidence 55689999999999999999986 22222 34467888887777888888875543
No 230
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.34 E-value=0.0066 Score=53.58 Aligned_cols=121 Identities=11% Similarity=0.191 Sum_probs=75.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|+.+|+.+-..... ....... +++.++.++.+ |.|..+|.++++.++.........+.+.....+.
T Consensus 254 ~d~~tG~~~w~~~~~---~~~~~~~--~~~~l~~~~~~--------g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~ 320 (376)
T 3q7m_A 254 LDLRSGQIMWKRELG---SVNDFIV--DGNRIYLVDQN--------DRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGN 320 (376)
T ss_dssp EETTTCCEEEEECCC---CEEEEEE--ETTEEEEEETT--------CCEEEEETTTCCEEEEECTTTTSCCCCCEEETTE
T ss_pred EECCCCcEEeeccCC---CCCCceE--ECCEEEEEcCC--------CeEEEEECCCCcEEEeecccCCCcccCCEEECCE
Confidence 566667666554432 2223222 24455555554 4899999999998887642111233344444444
Q ss_pred -eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 86 -VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 86 -l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
++++.++.|.++|.++|+.+..+... ...+.+.... .++.|++++.++.+..|+
T Consensus 321 l~v~~~~g~l~~~d~~tG~~~~~~~~~-~~~~~~~~~~-~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 321 LVVGDSEGYLHWINVEDGRFVAQQKVD-SSGFQTEPVA-ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECC-TTCBCSCCEE-ETTEEEEEBTTSCEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEecC-CCcceeCCEE-ECCEEEEEeCCCEEEEEe
Confidence 55567889999999999998887751 3344322222 356788899999998885
No 231
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.32 E-value=0.0061 Score=53.80 Aligned_cols=114 Identities=14% Similarity=0.149 Sum_probs=74.1
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe------cCCCCCCeeEEEEcCCc-eeeeC-----
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK------DHMYGLPIRDIKFHDNY-VLSMD----- 90 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~------~h~~~~pI~sI~F~~d~-l~Ssd----- 90 (248)
..+..++++|++..+++....+ +|.++||.+.+++. ..+ ...+-..+..|+|++++ |.-+|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~------~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~ 89 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFY------QPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQS 89 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGG------CCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHH
T ss_pred CCcceEEECCCCCEEEEeCCCC------CCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCc
Confidence 4688999998765444432211 12367777665432 211 11122468999999987 44333
Q ss_pred --CCeEEEEECCCCCEEEEeecC-----CCCCeeEEEEeCCCCEEEEEe----CCCeEEEEEcC
Q psy2083 91 --SSVVKIWSKDNGSLFTCIESG-----DQTQFNNLCHIPESGMMFIAN----ENKKILTYYIP 143 (248)
Q Consensus 91 --d~~IKIWD~~tGk~~~tie~~-----h~~~In~l~~~pdsgll~sa~----ed~~I~~w~Ip 143 (248)
+..|.+||..+|+.+.++... +...++++++.|+++.++++. .+..|.+|+..
T Consensus 90 ~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~ 153 (343)
T 2qe8_A 90 KSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQ 153 (343)
T ss_dssp TSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETT
T ss_pred CCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECC
Confidence 568999999999988887641 113579999999877776665 46889999865
No 232
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.31 E-value=0.0043 Score=60.93 Aligned_cols=52 Identities=13% Similarity=0.196 Sum_probs=43.5
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++.|..||+.||+.+-.+.. ..+++.-.+...++++|+|+.|+.++.|+...
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~--~~~~~~g~~~tagglvf~gt~dg~l~a~D~~t 505 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPY--VTIFNGGTLSTAGNLVFEGSADGRVIAYAADT 505 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred ceeEEEEECCCCCeEeEccC--CCCccCccceECCCEEEEECCCCcEEEEECCC
Confidence 37799999999999988876 45566667788999999999999999998643
No 233
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.30 E-value=0.0066 Score=53.44 Aligned_cols=122 Identities=10% Similarity=0.158 Sum_probs=84.3
Q ss_pred cccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC-CCCCC---eeEE
Q psy2083 4 QELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH-MYGLP---IRDI 79 (248)
Q Consensus 4 ~~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h-~~~~p---I~sI 79 (248)
..+|+.+++.+++|.....+ ..++ ++++.++.+.+++ +|.++|..+.+.+....- ..+.| +|.+
T Consensus 110 ~v~D~~t~~~~~ti~~~~eG--~glt--~dg~~L~~SdGs~--------~i~~iDp~T~~v~~~I~V~~~g~~~~~lNEL 177 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNYDGEG--WGLT--HNDQYLIMSDGTP--------VLRFLDPESLTPVRTITVTAHGEELPELNEL 177 (262)
T ss_dssp EEEETTTCCEEEEEECSSCC--CCEE--ECSSCEEECCSSS--------EEEEECTTTCSEEEEEECEETTEECCCEEEE
T ss_pred EEEECccCcEEEEEECCCCc--eEEe--cCCCEEEEECCCC--------eEEEEcCCCCeEEEEEEeccCCcccccccee
Confidence 34788899999999864222 3444 4567777765554 899999999876654321 12344 4567
Q ss_pred EEcCCceee--eCCCeEEEEECCCCCEEEEeecC-----------CCCCeeEEEEeCCCCEEEEEeCC-CeE
Q psy2083 80 KFHDNYVLS--MDSSVVKIWSKDNGSLFTCIESG-----------DQTQFNNLCHIPESGMMFIANEN-KKI 137 (248)
Q Consensus 80 ~F~~d~l~S--sdd~~IKIWD~~tGk~~~tie~~-----------h~~~In~l~~~pdsgll~sa~ed-~~I 137 (248)
.|....|.. -.++.|-+-|+++|+.+..|... ...-.|.+|+.|+++.|++++.- ++|
T Consensus 178 e~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~ 249 (262)
T 3nol_A 178 EWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKV 249 (262)
T ss_dssp EEETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEE
T ss_pred EEECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCce
Confidence 887433333 35778999999999999998751 01356999999999999998865 443
No 234
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.29 E-value=0.0013 Score=60.21 Aligned_cols=87 Identities=9% Similarity=-0.066 Sum_probs=67.2
Q ss_pred eeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--e-eee----------CCCeEEEEECCCCCEEEEeecCC-C-----
Q psy2083 53 AFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--V-LSM----------DSSVVKIWSKDNGSLFTCIESGD-Q----- 113 (248)
Q Consensus 53 ~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l-~Ss----------dd~~IKIWD~~tGk~~~tie~~h-~----- 113 (248)
+|.++|..+.+.+....-+. .| .+.|+||+ + ++. .++.|.+||..+++.+.++..+. .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTTEEEEEEEECT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred eEEEEECCCCeEEEEEeCCC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence 78899999999888765553 46 79999997 3 332 36899999999999999997410 0
Q ss_pred CCeeEEEEeCCCCEEEEEeCC--CeEEE--EEc
Q psy2083 114 TQFNNLCHIPESGMMFIANEN--KKILT--YYI 142 (248)
Q Consensus 114 ~~In~l~~~pdsgll~sa~ed--~~I~~--w~I 142 (248)
.....++|+|||+.+++++.. ..+.+ +|.
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~ 156 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGA 156 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTT
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEch
Confidence 245678999999999999863 56777 765
No 235
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.24 E-value=0.0072 Score=57.27 Aligned_cols=141 Identities=11% Similarity=0.071 Sum_probs=88.4
Q ss_pred cccchhcCceeEEEecC-C-CCCeeEEEEeCCCCcEEEeecC------cee-----eeecCCeeEEEEcCCCceeEEecC
Q psy2083 4 QELRQDKGSLFTCIESG-D-QTQFNNLCHIPESGMMFIANEN------KKI-----LTYYIPAFYLYDIRADKPLRVKDH 70 (248)
Q Consensus 4 ~~~~~~~G~~~~~~~~~-~-~~~V~~~~~~~~~g~l~~ag~d------~~~-----~~~~~G~V~LwDlRs~~pl~~~~h 70 (248)
..+|..+++++.+++.+ + ...-..+-++|+...++++.-- .+. .+-...+|.+||+.+++.+.+.+-
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 46889999999998732 1 1223457778877766665300 000 000124899999999877766544
Q ss_pred C-CCCCeeEEEE--cCCc----eeee-----CCCeEEEEECCCCCE--EEEee--cC---C------------CCCeeEE
Q psy2083 71 M-YGLPIRDIKF--HDNY----VLSM-----DSSVVKIWSKDNGSL--FTCIE--SG---D------------QTQFNNL 119 (248)
Q Consensus 71 ~-~~~pI~sI~F--~~d~----l~Ss-----dd~~IKIWD~~tGk~--~~tie--~~---h------------~~~In~l 119 (248)
+ .+..-..|.| +|++ +++. .+++|-+|..+.|+. .+.+. .. . ...+.++
T Consensus 247 g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 247 GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 3 1223345656 8886 5556 677887777665431 12221 10 0 1235688
Q ss_pred EEeCCCCEEEEEeCC-CeEEEEEcCC
Q psy2083 120 CHIPESGMMFIANEN-KKILTYYIPS 144 (248)
Q Consensus 120 ~~~pdsgll~sa~ed-~~I~~w~Ip~ 144 (248)
.++|||..|.+++.. +.|.+|+|..
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEECSS
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecC
Confidence 999999999999975 7999999853
No 236
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.23 E-value=0.011 Score=51.45 Aligned_cols=122 Identities=9% Similarity=0.129 Sum_probs=84.2
Q ss_pred cccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC-CCCCC---eeEE
Q psy2083 4 QELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH-MYGLP---IRDI 79 (248)
Q Consensus 4 ~~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h-~~~~p---I~sI 79 (248)
..+|+.+++.+.+|.....+ ..++ ++++.|+.+.+++ +|.++|..+.+.+....- .++.| +|-+
T Consensus 88 ~v~D~~tl~~~~ti~~~~~G--wglt--~dg~~L~vSdgs~--------~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeL 155 (243)
T 3mbr_X 88 FVYDLATLTPRARFRYPGEG--WALT--SDDSHLYMSDGTA--------VIRKLDPDTLQQVGSIKVTAGGRPLDNLNEL 155 (243)
T ss_dssp EEEETTTTEEEEEEECSSCC--CEEE--ECSSCEEEECSSS--------EEEEECTTTCCEEEEEECEETTEECCCEEEE
T ss_pred EEEECCcCcEEEEEeCCCCc--eEEe--eCCCEEEEECCCC--------eEEEEeCCCCeEEEEEEEccCCcccccceee
Confidence 45788999999999865222 4555 4567777765554 899999999876654321 12233 4566
Q ss_pred EEcCCceee--eCCCeEEEEECCCCCEEEEeecC------------CCCCeeEEEEeCCCCEEEEEeCC-CeE
Q psy2083 80 KFHDNYVLS--MDSSVVKIWSKDNGSLFTCIESG------------DQTQFNNLCHIPESGMMFIANEN-KKI 137 (248)
Q Consensus 80 ~F~~d~l~S--sdd~~IKIWD~~tGk~~~tie~~------------h~~~In~l~~~pdsgll~sa~ed-~~I 137 (248)
.+....|.. ..+..|.+-|+++|+.+..+... ...-.|.+++.|+++.|++.+.- ++|
T Consensus 156 e~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~ 228 (243)
T 3mbr_X 156 EWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPML 228 (243)
T ss_dssp EEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEE
T ss_pred EEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcE
Confidence 776444333 25778999999999999998731 01357999999999888888754 443
No 237
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.18 E-value=0.00096 Score=61.16 Aligned_cols=127 Identities=7% Similarity=-0.048 Sum_probs=79.3
Q ss_pred ccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecC--ceeeeecCCeeEEEEcCCCceeEEecCC--C----CCCe
Q psy2083 5 ELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN--KKILTYYIPAFYLYDIRADKPLRVKDHM--Y----GLPI 76 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d--~~~~~~~~G~V~LwDlRs~~pl~~~~h~--~----~~pI 76 (248)
-+|..+++.+.++..+. .. .+.++||++.+++++.. ...-|..+++|.+||+.+.+++....-+ . +..-
T Consensus 50 vID~~t~~v~~~i~vG~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P 126 (368)
T 1mda_H 50 VSCAGCGVTLGHSLGAF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRV 126 (368)
T ss_dssp EEETTTTEEEEEEEECT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCT
T ss_pred EEECCCCeEEEEEeCCC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCc
Confidence 47889999999998773 44 79999999998888631 0000001248999999999987765321 0 1224
Q ss_pred eEEEEcCCc---eeee--CCCeEEE--EECCCCCEEEEeecCCCCCeeEEEEeCCCC-EEEEEeCCCeEEEEEc
Q psy2083 77 RDIKFHDNY---VLSM--DSSVVKI--WSKDNGSLFTCIESGDQTQFNNLCHIPESG-MMFIANENKKILTYYI 142 (248)
Q Consensus 77 ~sI~F~~d~---l~Ss--dd~~IKI--WD~~tGk~~~tie~~h~~~In~l~~~pdsg-ll~sa~ed~~I~~w~I 142 (248)
..+.|+||+ +++. ++..|.+ +|..+ +..+.. ... +.+.|+++ .+++.+.|+++...++
T Consensus 127 ~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v--~~~---~~~~p~g~~~~~~~~~dg~~~~vd~ 192 (368)
T 1mda_H 127 HIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS--ASC---FHIHPGAAATHYLGSCPASLAASDL 192 (368)
T ss_dssp TSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC--SSC---CCCEEEETTEEECCCCTTSCEEEEC
T ss_pred ceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC--CCc---eEEccCCCeEEEEEcCCCCEEEEEC
Confidence 689999998 3333 3577888 99987 566653 221 12334442 3333445555544444
No 238
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.13 E-value=0.015 Score=56.85 Aligned_cols=113 Identities=4% Similarity=-0.065 Sum_probs=73.7
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC--c-eeEEecCCCCCCeeEEEEcCCc---eeeeC----CCe
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD--K-PLRVKDHMYGLPIRDIKFHDNY---VLSMD----SSV 93 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~--~-pl~~~~h~~~~pI~sI~F~~d~---l~Ssd----d~~ 93 (248)
.+..+.++||+..++.++.+.. .....|.+||+.++ + +.....+. ..+....+ +++ ++.++ ...
T Consensus 269 ~~~~~~~SpDG~~l~~~~~~~~---~~~~~l~~~d~~~~~~~~~~~l~~~~--~~~~~~~~-~dg~~l~~~s~~~~~~~~ 342 (741)
T 1yr2_A 269 RGHGASVSSDGRWVVITSSEGT---DPVNTVHVARVTNGKIGPVTALIPDL--KAQWDFVD-GVGDQLWFVSGDGAPLKK 342 (741)
T ss_dssp CEEEEEECTTSCEEEEEEECTT---CSCCEEEEEEEETTEECCCEEEECSS--SSCEEEEE-EETTEEEEEECTTCTTCE
T ss_pred EEEEEEECCCCCEEEEEEEccC---CCcceEEEEECCCCCCcccEEecCCC--CceEEEEe-ccCCEEEEEECCCCCCCE
Confidence 5788999998877776554320 01248999999887 4 43333333 33444434 554 33443 345
Q ss_pred EEEEECCCC-CEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 94 VKIWSKDNG-SLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 94 IKIWD~~tG-k~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
|.+||..++ .....+-+++...+.+++++ ++.+++++.+++..++|.+.
T Consensus 343 l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 343 IVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred EEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 999999886 35555555345567788887 67889999999988888654
No 239
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.08 E-value=0.012 Score=51.94 Aligned_cols=123 Identities=9% Similarity=0.165 Sum_probs=75.0
Q ss_pred cchhcCceeEEEecCCC--------CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCe-
Q psy2083 6 LRQDKGSLFTCIESGDQ--------TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPI- 76 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~--------~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI- 76 (248)
+|+.+|+.+-.+..... ..+...... +++.+++++.+ |.|..+|.++++.++..... ..+
T Consensus 68 ~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~~~--------g~l~a~d~~tG~~~W~~~~~--~~~~ 136 (376)
T 3q7m_A 68 LNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-SGGHVYIGSEK--------AQVYALNTSDGTVAWQTKVA--GEAL 136 (376)
T ss_dssp EETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-ETTEEEEEETT--------SEEEEEETTTCCEEEEEECS--SCCC
T ss_pred EEccCCceeeeecCccccccccccCcccccCceE-eCCEEEEEcCC--------CEEEEEECCCCCEEEEEeCC--CceE
Confidence 67778887766554210 122222222 24555555554 48999999999988876433 222
Q ss_pred eEEEEcCCc-eeeeCCCeEEEEECCCCCEEEEeecCCCCCe------eEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 77 RDIKFHDNY-VLSMDSSVVKIWSKDNGSLFTCIESGDQTQF------NNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 77 ~sI~F~~d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~I------n~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
.......+. ++.+.++.|..+|.++|+.+-.... ..++ ...+. +++.++++..++.+..++..
T Consensus 137 ~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~--~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~ 206 (376)
T 3q7m_A 137 SRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNL--DMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLME 206 (376)
T ss_dssp SCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC--CC-----CCCCCCEE--ETTEEEECCTTTEEEEEETT
T ss_pred cCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeC--CCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECC
Confidence 222333334 5566788999999999999888775 2222 22222 25677888888888888754
No 240
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.07 E-value=0.0088 Score=56.69 Aligned_cols=114 Identities=15% Similarity=0.152 Sum_probs=77.0
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCC--CCeeEEEEcCCc--eeeeC-----------
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYG--LPIRDIKFHDNY--VLSMD----------- 90 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~--~pI~sI~F~~d~--l~Ssd----------- 90 (248)
.++.+.|++ +++++.++. -|...|.|.++|..+.+.+....-+-+ .--..+-|+|+. +++++
T Consensus 141 h~~~~~pdG-i~Vs~~g~~--~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~ 217 (462)
T 2ece_A 141 HTVHCGPDA-IYISALGNE--EGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGL 217 (462)
T ss_dssp EEEEECSSC-EEEEEEEET--TSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCC
T ss_pred cceeECCCe-EEEEcCCCc--CCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCcccccccc
Confidence 456677866 555444431 123346899999999988776532211 112357889987 55664
Q ss_pred ---------CCeEEEEECCCCCEEEEeecCCC-CCeeEEEE--eCCCCEEEEEeC------CCeEEEEEc
Q psy2083 91 ---------SSVVKIWSKDNGSLFTCIESGDQ-TQFNNLCH--IPESGMMFIANE------NKKILTYYI 142 (248)
Q Consensus 91 ---------d~~IKIWD~~tGk~~~tie~~h~-~~In~l~~--~pdsgll~sa~e------d~~I~~w~I 142 (248)
...|.+||..+++.+.++..+.. .....+.| +|++..++++++ +++|.+|+.
T Consensus 218 ~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~ 287 (462)
T 2ece_A 218 KLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFY 287 (462)
T ss_dssp CTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEE
T ss_pred chhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEe
Confidence 78999999999999999986201 34556666 999999999986 458876553
No 241
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.03 E-value=0.0093 Score=52.69 Aligned_cols=118 Identities=14% Similarity=0.168 Sum_probs=81.8
Q ss_pred cccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC-CCCCC---eeEE
Q psy2083 4 QELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH-MYGLP---IRDI 79 (248)
Q Consensus 4 ~~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h-~~~~p---I~sI 79 (248)
..+|+.+++.+++|... ..=..++ ++++.|+.+.+++ +|.++|..+.+.+....- .++.+ ++.+
T Consensus 119 ~V~D~~Tl~~~~ti~~~--~eGwGLt--~Dg~~L~vSdGs~--------~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeL 186 (268)
T 3nok_A 119 FTWSGMPPQRERTTRYS--GEGWGLC--YWNGKLVRSDGGT--------MLTFHEPDGFALVGAVQVKLRGQPVELINEL 186 (268)
T ss_dssp EEEETTTTEEEEEEECS--SCCCCEE--EETTEEEEECSSS--------EEEEECTTTCCEEEEEECEETTEECCCEEEE
T ss_pred EEEECCcCcEEEEEeCC--CceeEEe--cCCCEEEEECCCC--------EEEEEcCCCCeEEEEEEeCCCCccccccccc
Confidence 45788999999999864 2224555 3466777665554 899999999876654311 12233 4677
Q ss_pred EEcCCceee--eCCCeEEEEECCCCCEEEEeecC------------CCCCeeEEEEeCCCCEEEEEeC
Q psy2083 80 KFHDNYVLS--MDSSVVKIWSKDNGSLFTCIESG------------DQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 80 ~F~~d~l~S--sdd~~IKIWD~~tGk~~~tie~~------------h~~~In~l~~~pdsgll~sa~e 133 (248)
.|....|.. ..+..|.+-|+++|+.+..|... ...-.|.+|+.|+++.|++++.
T Consensus 187 e~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 187 ECANGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEETTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 887444333 25778999999999999998741 0136799999999888887764
No 242
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.95 E-value=0.055 Score=45.41 Aligned_cols=110 Identities=10% Similarity=0.086 Sum_probs=73.2
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--ee--eeCCCeEEEEEC
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VL--SMDSSVVKIWSK 99 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~--Ssdd~~IKIWD~ 99 (248)
....+++.++++.++.+.... +.|..+|+..+........+. .....|++++++ +. ....+.|.++|.
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~-------~~I~~~~~~g~~~~~~~~~~~-~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~ 108 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISE-------PSIGRASLHGGEPTTIIRQDL-GSPEGIALDHLGRTIFWTDSQLDRIEVAKM 108 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTT-------TEEEEEESSSCCCEEEECTTC-CCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cEEEEEEecCCCEEEEEECCC-------CEEEEEecCCCCcEEEEECCC-CCccEEEEEecCCeEEEEECCCCEEEEEEc
Confidence 456888888888888776543 489999998765433332221 246899999863 33 335778999998
Q ss_pred CCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC---CeEEEEEc
Q psy2083 100 DNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN---KKILTYYI 142 (248)
Q Consensus 100 ~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed---~~I~~w~I 142 (248)
+. +....+-.......+.+++.|+++.|+.+... ++|..+.+
T Consensus 109 ~g-~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~ 153 (267)
T 1npe_A 109 DG-TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHM 153 (267)
T ss_dssp TS-CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEET
T ss_pred CC-CCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEec
Confidence 74 33333332113567899999988887777754 57777764
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.92 E-value=0.14 Score=42.95 Aligned_cols=112 Identities=9% Similarity=-0.014 Sum_probs=72.9
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC-c-eeeeC----CCeEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN-Y-VLSMD----SSVVKI 96 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d-~-l~Ssd----d~~IKI 96 (248)
.....+++.++++.++.+.... +.|..+|+...........+. ..-+.|+++|+ + +.-++ .+.|..
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~-------~~I~~~~~~g~~~~~~~~~~~-~~P~~i~vd~~~g~lyv~~~~~~~~~I~~ 150 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQL-------DRIEVAKMDGTQRRVLFDTGL-VNPRGIVTDPVRGNLYWTDWNRDNPKIET 150 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTT-------TEEEEEETTSCSCEEEECSSC-SSEEEEEEETTTTEEEEEECCSSSCEEEE
T ss_pred CCccEEEEEecCCeEEEEECCC-------CEEEEEEcCCCCEEEEEECCC-CCccEEEEeeCCCEEEEEECCCCCcEEEE
Confidence 4678888888888887766543 489999987543222222121 23589999995 4 33332 457888
Q ss_pred EECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcC
Q psy2083 97 WSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIP 143 (248)
Q Consensus 97 WD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip 143 (248)
++.+ |+....+........+.+++.|+++.|+.+.. .++|..++..
T Consensus 151 ~~~d-g~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~ 197 (267)
T 1npe_A 151 SHMD-GTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPA 197 (267)
T ss_dssp EETT-SCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EecC-CCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecC
Confidence 8876 55444443211356889999999887777765 4788888753
No 244
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.71 E-value=0.013 Score=57.19 Aligned_cols=133 Identities=10% Similarity=-0.069 Sum_probs=90.4
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceee------------------------------eecCCeeE
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKIL------------------------------TYYIPAFY 55 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~------------------------------~~~~G~V~ 55 (248)
+|..+++....+.-+ ++--.+.++|+++++++++.+.... ....+.|.
T Consensus 180 ID~~t~~v~~qI~Vg--g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 180 VDADKWEVAWQVLVS--GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EETTTTEEEEEEEES--SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EECCCCeEEEEEEeC--CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 466677777776643 2345677899999988887653100 01125699
Q ss_pred EEEcCC--Cce-eEEecCCCCCCeeEEEEcCCc--eeee--CCCeEEEEECCCCC------------EEEEeecCCCCCe
Q psy2083 56 LYDIRA--DKP-LRVKDHMYGLPIRDIKFHDNY--VLSM--DSSVVKIWSKDNGS------------LFTCIESGDQTQF 116 (248)
Q Consensus 56 LwDlRs--~~p-l~~~~h~~~~pI~sI~F~~d~--l~Ss--dd~~IKIWD~~tGk------------~~~tie~~h~~~I 116 (248)
+.|.++ ++. +....-+ ....+|.|+||+ ++.+ .+.+|.++|..+.+ .+..++. ....
T Consensus 258 VID~~~~~~~~~~~~Ipvg--~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v--G~gP 333 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPIA--NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL--GLGP 333 (595)
T ss_dssp EEECSGGGCCSSEEEEEEE--SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC--CSCE
T ss_pred EEeCcccCCceeEEEEecC--CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC--CCCc
Confidence 999998 555 3222212 335789999998 4444 47899999999653 5667776 4677
Q ss_pred eEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 117 NNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 117 n~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
..++|+|||...++.--|++|..|++..
T Consensus 334 ~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 334 LHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred ceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 8999999994444455689999999754
No 245
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.68 E-value=0.06 Score=52.53 Aligned_cols=102 Identities=10% Similarity=0.028 Sum_probs=69.3
Q ss_pred CCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC-c--eeeeCCCeEEEEECCCCCEEEEeecCCCCCee--EEEEeCCC
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN-Y--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFN--NLCHIPES 125 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d-~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In--~l~~~pds 125 (248)
+|.|.-||+++++.++...+. .++....+... + ++++.++.|+.||.++|+.+..++. ...+. -+.+..+|
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~--~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~--~~~~~~~p~~~~~~G 512 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYP--THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEA--QSGIVAAPMTFELAG 512 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC--SSCCCSCCEEEEETT
T ss_pred cceEEEEeCCCCcEEEEccCC--CCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecC--CCCcccCceEEEECC
Confidence 489999999999998876544 44443333322 3 4445789999999999999999986 23222 23444566
Q ss_pred CEEEEEeC---------------------CCeEEEEEcCCCCCCCCcccccc
Q psy2083 126 GMMFIANE---------------------NKKILTYYIPSLGPAPKWCGFLD 156 (248)
Q Consensus 126 gll~sa~e---------------------d~~I~~w~Ip~lG~aP~wcs~ld 156 (248)
.+.++.+. .+.|.+|-++..+.-|.|-.-++
T Consensus 513 ~~yva~~~G~g~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~p~~~~~~~ 564 (668)
T 1kv9_A 513 RQYVAIMAGWGGVATLTGGESMNLPGMKNRSRLLVFALDGKAQLPPPAPAPA 564 (668)
T ss_dssp EEEEEEEECCCSHHHHHCCGGGGSTTCCCCCEEEEEEETCCCCCCCCCCCCC
T ss_pred EEEEEEEecCCCccccccccccccccCCCCCeEEEEEcCccCCCCCCccccc
Confidence 54333322 35899999999888898854333
No 246
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.64 E-value=0.012 Score=57.47 Aligned_cols=120 Identities=13% Similarity=0.101 Sum_probs=80.5
Q ss_pred cchhc--Cce-eEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce----------eEEecCCC
Q psy2083 6 LRQDK--GSL-FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP----------LRVKDHMY 72 (248)
Q Consensus 6 ~~~~~--G~~-~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p----------l~~~~h~~ 72 (248)
+|..+ |+. ++++.-+ .....+.++||+.++++++... .+|.+||+.+.+. .....-.-
T Consensus 259 ID~~~~~~~~~~~~Ipvg--~~PhGv~~sPDGk~v~V~~~~s-------~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v 329 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPIA--NNPHGCNMAPDKKHLCVAGKLS-------PTVTVLDVTRFDAVFYENADPRSAVVAEPEL 329 (595)
T ss_dssp EECSGGGCCSSEEEEEEE--SSCCCEEECTTSSEEEEECTTS-------SBEEEEEGGGHHHHHHSCCCGGGGEEECCBC
T ss_pred EeCcccCCceeEEEEecC--CCceEEEEcCCCCEEEEeCCCC-------CeEEEEECcccccccccccCcccceEEEcCC
Confidence 45555 666 6777654 3456899999988877776543 4999999996531 01112223
Q ss_pred CCCeeEEEEcCCc-e-eee-CCCeEEEEECCC----------CCEEEEeecCCCCCe-e----EEEEeCCCCEEEEEeCC
Q psy2083 73 GLPIRDIKFHDNY-V-LSM-DSSVVKIWSKDN----------GSLFTCIESGDQTQF-N----NLCHIPESGMMFIANEN 134 (248)
Q Consensus 73 ~~pI~sI~F~~d~-l-~Ss-dd~~IKIWD~~t----------Gk~~~tie~~h~~~I-n----~l~~~pdsgll~sa~ed 134 (248)
|..-..++|++++ + ++. -|.+|-.||.++ .+.+.++..+ ..+- + ..+++|||..|++++.-
T Consensus 330 G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~-yqpGh~~~~~g~t~~~DGk~l~~~Nk~ 408 (595)
T 1fwx_A 330 GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH-YQPGHLKTVMGETLDATNDWLVCLSKF 408 (595)
T ss_dssp CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECS-SCEEEEEETTTTSTTCCSSEEEEEESC
T ss_pred CCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecc-cccccceeccceEeCCCCCEEEEcCCC
Confidence 4667899999998 2 333 588888899987 6678888772 3321 1 12457999999999864
Q ss_pred C
Q psy2083 135 K 135 (248)
Q Consensus 135 ~ 135 (248)
.
T Consensus 409 s 409 (595)
T 1fwx_A 409 S 409 (595)
T ss_dssp C
T ss_pred C
Confidence 3
No 247
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.61 E-value=0.029 Score=47.70 Aligned_cols=119 Identities=5% Similarity=0.032 Sum_probs=76.6
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+|+. |+..-....+ ...+.+.+..+ +|.++.++.++ .|..||.. ++.++..... ...+.++.+.+++
T Consensus 122 ~d~~-g~~~~~~~~~-~~~~~~~~~~~-~g~l~vgt~~~--------~l~~~d~~-g~~~~~~~~~-~~~~~~~~~d~~g 188 (330)
T 3hxj_A 122 INTD-GTEKWRFKTK-KAIYATPIVSE-DGTIYVGSNDN--------YLYAINPD-GTEKWRFKTN-DAITSAASIGKDG 188 (330)
T ss_dssp ECTT-SCEEEEEECS-SCCCSCCEECT-TSCEEEECTTS--------EEEEECTT-SCEEEEEECS-SCCCSCCEECTTC
T ss_pred EcCC-CCEEEEEcCC-CceeeeeEEcC-CCEEEEEcCCC--------EEEEECCC-CCEeEEEecC-CCceeeeEEcCCC
Confidence 5555 6665555543 23344444443 44566655543 79999999 7776655432 3467778887666
Q ss_pred -eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 86 -VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 86 -l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
+..+. +.|..+| .+|+.+..+.. ....++++++.++|. |.+++.++.+..++
T Consensus 189 ~l~v~t-~~l~~~d-~~g~~~~~~~~-~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~ 241 (330)
T 3hxj_A 189 TIYFGS-DKVYAIN-PDGTEKWNFYA-GYWTVTRPAISEDGT-IYVTSLDGHLYAIN 241 (330)
T ss_dssp CEEEES-SSEEEEC-TTSCEEEEECC-SSCCCSCCEECTTSC-EEEEETTTEEEEEC
T ss_pred EEEEEe-CEEEEEC-CCCcEEEEEcc-CCcceeceEECCCCe-EEEEcCCCeEEEEC
Confidence 33333 7788999 77888777765 256788888888764 56677777777764
No 248
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.60 E-value=0.025 Score=54.49 Aligned_cols=76 Identities=8% Similarity=0.071 Sum_probs=52.0
Q ss_pred CCeeEEEEcCCCceeEEecCCCCCCeeEEEE-cCCc--eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeE--EEEeCCC
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMYGLPIRDIKF-HDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNN--LCHIPES 125 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F-~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~--l~~~pds 125 (248)
.|.|.-||+++++.++...+. .++..-.. ..++ .+++.|+.++.||.++|+.+-.++. ...+.. +.+..||
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~--~~g~~a~P~~y~~~G 540 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH--LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQT--GSGIVSPPITWEQDG 540 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES--SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC--SSCCCSCCEEEEETT
T ss_pred cceEEEEECCCCCEEEEecCC--CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecC--CCCcccCceEEEECC
Confidence 579999999999998876543 34332111 1233 3456799999999999999999986 444433 5666777
Q ss_pred CEEEE
Q psy2083 126 GMMFI 130 (248)
Q Consensus 126 gll~s 130 (248)
.+.++
T Consensus 541 ~qYv~ 545 (582)
T 1flg_A 541 EQYLG 545 (582)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 64443
No 249
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.59 E-value=0.048 Score=46.33 Aligned_cols=123 Identities=7% Similarity=0.010 Sum_probs=74.6
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY 85 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~ 85 (248)
+| .+|+.+-.+..+ ...+.+++..+ +|.+.+++.++ .|..+|. +++.++..... ...+.++.+.+++
T Consensus 200 ~d-~~g~~~~~~~~~-~~~~~~~~~~~-~g~l~v~t~~~--------gl~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~g 266 (330)
T 3hxj_A 200 IN-PDGTEKWNFYAG-YWTVTRPAISE-DGTIYVTSLDG--------HLYAINP-DGTEKWRFKTG-KRIESSPVIGNTD 266 (330)
T ss_dssp EC-TTSCEEEEECCS-SCCCSCCEECT-TSCEEEEETTT--------EEEEECT-TSCEEEEEECS-SCCCSCCEECTTS
T ss_pred EC-CCCcEEEEEccC-CcceeceEECC-CCeEEEEcCCC--------eEEEECC-CCCEeEEeeCC-CCccccceEcCCC
Confidence 45 456655555443 24455555554 44566665554 5777774 55565554332 1234456666555
Q ss_pred --eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 86 --VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 86 --l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.+++.++.|..+|. +|+.+..+... ...+++++..++|. |.+++.++.+.....+.
T Consensus 267 ~l~v~t~~ggl~~~d~-~g~~~~~~~~~-~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 267 TIYFGSYDGHLYAINP-DGTEKWNFETG-SWIIATPVIDENGT-IYFGTRNGKFYALFNLE 324 (330)
T ss_dssp CEEEECTTCEEEEECT-TSCEEEEEECS-SCCCSCCEECTTCC-EEEECTTSCEEEEEC--
T ss_pred eEEEecCCCCEEEECC-CCcEEEEEEcC-CccccceEEcCCCE-EEEEcCCCeEEEEeccc
Confidence 45566767888897 68888777752 45677777777765 56788899888775443
No 250
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.57 E-value=0.017 Score=55.44 Aligned_cols=78 Identities=6% Similarity=-0.065 Sum_probs=52.6
Q ss_pred CCeeEEEEcCCCceeEEecCCCCCCeeEEEEc-CCc--eeeeCCCeEEEEECCCCCEEEEeecCCCCCee--EEEEeCCC
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMYGLPIRDIKFH-DNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFN--NLCHIPES 125 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~-~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In--~l~~~pds 125 (248)
+|.|..||+++++.++...+. .++.+..+. .++ ++++.|+.|..||.++|+.+.+++. ...+. -+.+.++|
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~--~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~--~~~~~~~p~~~~~~G 518 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEK--FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKM--PSGGIGSPMTYSFKG 518 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEES--SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC--SSCCCSCCEEEEETT
T ss_pred CCeEEEEECCCCCEEEEecCC--CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeC--CCCcEeeeEEEEECC
Confidence 579999999999998876554 344433222 233 4456789999999999999999986 23332 23445677
Q ss_pred CEEEEEe
Q psy2083 126 GMMFIAN 132 (248)
Q Consensus 126 gll~sa~ 132 (248)
.++++..
T Consensus 519 ~~yv~~~ 525 (571)
T 2ad6_A 519 KQYIGSM 525 (571)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 6554443
No 251
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.56 E-value=0.026 Score=54.12 Aligned_cols=52 Identities=6% Similarity=-0.040 Sum_probs=41.5
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
++.|..||..+|+.+-++.. ..++.+..+...++++++++.|+.+..++...
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~--~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~t 494 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWE--KFAAWGGTLYTKGGLVWYATLDGYLKALDNKD 494 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEE--SSCCCSBCEEETTTEEEEECTTSEEEEEETTT
T ss_pred CCeEEEEECCCCCEEEEecC--CCCccceeEEECCCEEEEEcCCCeEEEEECCC
Confidence 47899999999999888875 44555545556788999999999999999654
No 252
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.40 E-value=0.042 Score=52.93 Aligned_cols=51 Identities=4% Similarity=0.018 Sum_probs=39.7
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++.|.-||+.+|+.+-+... ..+++.-.+...++++|+|+.|+.++.|+..
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~--~~~~~~g~~~tagglvf~g~~dg~l~A~D~~ 515 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKE--HLPLWAGVLATAGNLVFTGTGDGYFKAFDAK 515 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEE--SSCCCSCCEEETTTEEEEECTTSEEEEEETT
T ss_pred cceEEEEECCCCCEEEEecC--CCCCcccceEeCCCEEEEECCCCcEEEEECC
Confidence 57899999999999877765 3444443444568899999999999999864
No 253
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.33 E-value=0.088 Score=45.50 Aligned_cols=110 Identities=6% Similarity=0.040 Sum_probs=69.8
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce--eEEecCC-CCCCeeEEEEcC-Cc-e-eee-C------
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP--LRVKDHM-YGLPIRDIKFHD-NY-V-LSM-D------ 90 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p--l~~~~h~-~~~pI~sI~F~~-d~-l-~Ss-d------ 90 (248)
.+..+++.+++|.++.+.... .|..+|..++.. +.....+ .-...+.|.+.+ ++ + ++. .
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~~--------~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~ 152 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCYY--------HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDR 152 (322)
T ss_dssp CEEEEEEETTTTEEEEEETTT--------EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTT
T ss_pred CCceEEEcCCCCcEEEEECCC--------CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCccccccc
Confidence 456777776556677665544 478888776532 2111111 012368899999 77 2 322 1
Q ss_pred -----------CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEE-eCCCeEEEEEcC
Q psy2083 91 -----------SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIA-NENKKILTYYIP 143 (248)
Q Consensus 91 -----------d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa-~ed~~I~~w~Ip 143 (248)
++.|-.||..+++....... ....|.++++||++.|+++ ....+|..|++.
T Consensus 153 ~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~--~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~ 215 (322)
T 2fp8_A 153 GVQQIMDTSDKTGRLIKYDPSTKETTLLLKE--LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLE 215 (322)
T ss_dssp CHHHHHHHTCCCEEEEEEETTTTEEEEEEEE--ESCCCEEEECTTSSEEEEEEGGGTEEEEEESS
T ss_pred ccceehcccCCCceEEEEeCCCCEEEEeccC--CccCcceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 25688899887765443333 3556789999999977666 456899999865
No 254
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.20 E-value=0.55 Score=40.91 Aligned_cols=126 Identities=10% Similarity=-0.001 Sum_probs=77.0
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC----CceeEEecCCCCCCeeEEEE
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA----DKPLRVKDHMYGLPIRDIKF 81 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs----~~pl~~~~h~~~~pI~sI~F 81 (248)
++..++.....+... .....+.+.++++.++.+.... +.|..+|+.. .........+. .....|++
T Consensus 15 i~~~~~~~~~~~~~~--~~p~g~~~d~~~~~ly~~D~~~-------~~I~~~~~~g~~~~~~~~~~~~~~~-~~p~glav 84 (316)
T 1ijq_A 15 MTLDRSEYTSLIPNL--RNVVALDTEVASNRIYWSDLSQ-------RMICSTQLDRAHGVSSYDTVISRDI-QAPDGLAV 84 (316)
T ss_dssp EETTSCCCEEEECSC--SSEEEEEEETTTTEEEEEETTT-------TEEEEEEC--------CEEEECSSC-SCCCEEEE
T ss_pred EECCCcceEehhcCC--CceEEEEEEeCCCEEEEEECCC-------CcEEEEECCCCCCCcccEEEEeCCC-CCcCEEEE
Confidence 444445544444443 5678899998888888776554 4899999986 22222222221 23478999
Q ss_pred cCC-c-eee--eCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC--CeEEEEEc
Q psy2083 82 HDN-Y-VLS--MDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN--KKILTYYI 142 (248)
Q Consensus 82 ~~d-~-l~S--sdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed--~~I~~w~I 142 (248)
++. + |.- +..+.|.+.|.+.......+.. .....+++++.|.++.|+.+... ++|..++.
T Consensus 85 d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~ 150 (316)
T 1ijq_A 85 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 150 (316)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC-TTCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred eecCCeEEEEECCCCEEEEEeCCCCceEEEEEC-CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcC
Confidence 864 3 433 4577899999874333333333 14678999999988877777654 56766653
No 255
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.19 E-value=0.11 Score=50.65 Aligned_cols=51 Identities=12% Similarity=0.155 Sum_probs=42.1
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
++.|.-||..||+.+-.+.. ..+.....+...++++|+++.|+.++.|+..
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~--~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~ 487 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPY--PTHWNGGTLSTAGNLVFQGTAAGQMHAYSAD 487 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred cceEEEEeCCCCcEEEEccC--CCCCcCceeEeCCCEEEEECCcccchhhhhh
Confidence 47899999999999888775 4555555667789999999999999999864
No 256
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.18 E-value=0.095 Score=50.87 Aligned_cols=110 Identities=11% Similarity=0.127 Sum_probs=67.4
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC--ceeEEecCCCCCCeeEEEEcCCc---eeee-C---CCe
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD--KPLRVKDHMYGLPIRDIKFHDNY---VLSM-D---SSV 93 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~--~pl~~~~h~~~~pI~sI~F~~d~---l~Ss-d---d~~ 93 (248)
..+.++.++||+..++.+...+ +....|.++|+.++ .+.....+. ..+... +++++ ++.+ . ...
T Consensus 234 ~~~~~~~~SpDg~~l~~~~~~~----~~~~~i~~~d~~~~~~~~~~l~~~~--~~~~~~-~~~~g~~l~~~t~~~~~~~~ 306 (693)
T 3iuj_A 234 HRYVGATVTEDDRFLLISAANS----TSGNRLYVKDLSQENAPLLTVQGDL--DADVSL-VDNKGSTLYLLTNRDAPNRR 306 (693)
T ss_dssp CSEEEEEECTTSCEEEEEEESS----SSCCEEEEEETTSTTCCCEEEECSS--SSCEEE-EEEETTEEEEEECTTCTTCE
T ss_pred eEEEEEEEcCCCCEEEEEEccC----CCCcEEEEEECCCCCCceEEEeCCC--CceEEE-EeccCCEEEEEECCCCCCCE
Confidence 4577888999888776544332 12348999999887 333333333 334444 44333 3333 2 357
Q ss_pred EEEEECCCCCE--EEEeecCCCCCeeEEEEeCCCCEEEEEe-CCC--eEEEEEc
Q psy2083 94 VKIWSKDNGSL--FTCIESGDQTQFNNLCHIPESGMMFIAN-ENK--KILTYYI 142 (248)
Q Consensus 94 IKIWD~~tGk~--~~tie~~h~~~In~l~~~pdsgll~sa~-ed~--~I~~w~I 142 (248)
|..||..+++. ++.+.++ ...+. .|+|+++.|+... +++ +|.+|++
T Consensus 307 l~~~d~~~~~~~~~~~l~~~-~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~ 357 (693)
T 3iuj_A 307 LVTVDAANPGPAHWRDLIPE-RQQVL--TVHSGSGYLFAEYMVDATARVEQFDY 357 (693)
T ss_dssp EEEEETTSCCGGGCEEEECC-CSSCE--EEEEETTEEEEEEEETTEEEEEEECT
T ss_pred EEEEeCCCCCccccEEEecC-CCCEE--EEEEECCEEEEEEEECCeeEEEEEEC
Confidence 88999998765 5567763 44443 8889887666554 454 5666654
No 257
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.81 E-value=0.13 Score=48.50 Aligned_cols=107 Identities=10% Similarity=0.230 Sum_probs=68.7
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC----------ceeEE--ec-----CCCCCCeeEEEEcCCc-
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD----------KPLRV--KD-----HMYGLPIRDIKFHDNY- 85 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~----------~pl~~--~~-----h~~~~pI~sI~F~~d~- 85 (248)
.|..+..+|+|.+|+..|.. +|.+-++-.+ .++.. +. .....+|.++.|||-+
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~---------~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~ 137 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDN---------EIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSY 137 (452)
T ss_dssp TTCEEEECTTSSEEEEECSS---------EEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBG
T ss_pred ceeEEEECCCCCEEEEecCC---------eEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccC
Confidence 56778888876666666655 4666665422 11111 11 1124789999999975
Q ss_pred -----eeeeCCCeEEEEECCCC--CEEEEee-------c-CCCCCeeEEEEeCCCCEEEEEe--CCCeEEEE
Q psy2083 86 -----VLSMDSSVVKIWSKDNG--SLFTCIE-------S-GDQTQFNNLCHIPESGMMFIAN--ENKKILTY 140 (248)
Q Consensus 86 -----l~Ssdd~~IKIWD~~tG--k~~~tie-------~-~h~~~In~l~~~pdsgll~sa~--ed~~I~~w 140 (248)
|+=.+|++||+||.... ++. .+. . .+...|.++||.+++=.|.+.+ ++|.|...
T Consensus 138 ~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 138 RDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp GGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred CCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 44468889999999862 222 221 1 0236899999999876677766 88888765
No 258
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=95.76 E-value=0.24 Score=45.61 Aligned_cols=130 Identities=13% Similarity=0.087 Sum_probs=74.5
Q ss_pred cccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCC-eeEEEEcCCCcee--EEecCCCCCCeeEEE
Q psy2083 4 QELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP-AFYLYDIRADKPL--RVKDHMYGLPIRDIK 80 (248)
Q Consensus 4 ~~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G-~V~LwDlRs~~pl--~~~~h~~~~pI~sI~ 80 (248)
+.++...+........ ......+++.+++..++.+...++ ... .+..++ +.+... ...... .....|+
T Consensus 162 ~~id~~~~~v~~~~~~--~~~P~~ia~d~~G~~lyvad~~~~----~~~~~v~~~~-~~g~~~~~~~l~~~--~~p~gia 232 (430)
T 3tc9_A 162 RLIDFEKEYVSTVYSG--LSKVRTICWTHEADSMIITNDQNN----NDRPNNYILT-RESGFKVITELTKG--QNCNGAE 232 (430)
T ss_dssp EEEETTTTEEEEEECC--CSCEEEEEECTTSSEEEEEECCSC----TTSEEEEEEE-GGGTSCSEEEEEEC--SSCCCEE
T ss_pred EEEECCCCEEEEEecC--CCCcceEEEeCCCCEEEEEeCCCC----cccceEEEEe-CCCceeeeeeeccC--CCceEEE
Confidence 3466655554444443 356788999998776776655321 001 233334 333211 111111 2347889
Q ss_pred EcC-Cc-eeee--CCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEc
Q psy2083 81 FHD-NY-VLSM--DSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYI 142 (248)
Q Consensus 81 F~~-d~-l~Ss--dd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~I 142 (248)
++| ++ |.-+ ..+.|..+|..++..............+.++|+|+|..|+.+. ...+|..++.
T Consensus 233 vdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~ 299 (430)
T 3tc9_A 233 THPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDY 299 (430)
T ss_dssp ECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeC
Confidence 999 55 4433 5678999999866542222221134578999999999555554 5678888764
No 259
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.57 E-value=0.32 Score=44.49 Aligned_cols=165 Identities=15% Similarity=0.224 Sum_probs=96.7
Q ss_pred cchhcCceeEEEecCCCCCeeEEEEeCC---CC----cEEEeecC--ceeeeecCCeeEEEEcC-CCceeEEecC---C-
Q psy2083 6 LRQDKGSLFTCIESGDQTQFNNLCHIPE---SG----MMFIANEN--KKILTYYIPAFYLYDIR-ADKPLRVKDH---M- 71 (248)
Q Consensus 6 ~~~~~G~~~~~~~~~~~~~V~~~~~~~~---~g----~l~~ag~d--~~~~~~~~G~V~LwDlR-s~~pl~~~~h---~- 71 (248)
+|. +|++++.+..+ .+|++..-|. +| +.+++..+ . .+|.+|++. ..+++..... .
T Consensus 55 ydl-~G~~l~~~~~g---~~nnVD~r~~~~l~g~~~dla~as~R~~~~-------n~l~vf~iDp~~~~l~~i~~~~~pv 123 (355)
T 3amr_A 55 YSL-DGKMLHSYNTG---KLNNVDIRYDFPLNGKKVDIAAASNRSEGK-------NTIEIYAIDGKNGTLQSMTDPDHPI 123 (355)
T ss_dssp EET-TSCEEEEECCS---CEEEEEEEEEEEETTEEEEEEEEEECSTTC-------CEEEEEEECTTTCCEEECSCTTSCE
T ss_pred EcC-CCcEEEEccCC---CcccEEEecccccCCceEeEEEEeCCCCCC-------CeEEEEEECCCCCceeeccccccCc
Confidence 455 89999998753 5777776662 11 12333333 2 489999883 3334444321 0
Q ss_pred -CC-CCeeEEEE--cCC-c----eeeeCCCeEEEEEC---C----CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCC
Q psy2083 72 -YG-LPIRDIKF--HDN-Y----VLSMDSSVVKIWSK---D----NGSLFTCIESGDQTQFNNLCHIPESGMMFIANENK 135 (248)
Q Consensus 72 -~~-~pI~sI~F--~~d-~----l~Ssdd~~IKIWD~---~----tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~ 135 (248)
-+ ..+..+++ ++. + +++..++.+..|++ . +++.+.+|.. ...+-.+.+.+..+.|+++-|+.
T Consensus 124 ~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l--gsq~EgcvvDd~~g~Lyv~eEd~ 201 (355)
T 3amr_A 124 ATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM--NSQTEGMAADDEYGRLYIAEEDE 201 (355)
T ss_dssp ECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC--SSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC--CCCcceEEEcCCCCeEEEecccc
Confidence 11 33556777 553 2 44556788888887 2 3467788887 56788888999999999999997
Q ss_pred eEEEEEcC-CCCCCCC--ccccccchhhhhhcccccccc-C----CceeecHhHHhhcC
Q psy2083 136 KILTYYIP-SLGPAPK--WCGFLDNLTEELEENIIENVY-D----DYKFVTRQELEDLG 186 (248)
Q Consensus 136 ~I~~w~Ip-~lG~aP~--wcs~ld~~tee~e~~~~~~~y-d----~y~fvt~~~l~~l~ 186 (248)
-|..|+.. .-+..++ .+--...++.+.| .-++| . .|-|++.+.-..+.
T Consensus 202 GIw~~da~p~~~~~~~~v~~~~~g~l~aDvE---GLai~~~~~g~gyLivSsQG~~s~~ 257 (355)
T 3amr_A 202 AIWKFSAEPDGGSNGTVIDRADGRHLTRDIE---GLTIYYAADGKGYLMASSQGNSSYA 257 (355)
T ss_dssp EEEEEECSTTSCSCCEEEEEBSSSSBCSCEE---EEEEEECGGGCEEEEEEEGGGTEEE
T ss_pred eEEEEeCCcCCCCCceEEEEecCCccccCcc---eEEEEecCCCCEEEEEEcCCCCEEE
Confidence 66665532 2112211 1111334444333 23354 3 47888876664443
No 260
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.56 E-value=0.21 Score=48.40 Aligned_cols=60 Identities=8% Similarity=-0.025 Sum_probs=43.4
Q ss_pred CCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCcccc
Q psy2083 91 SSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKWCGF 154 (248)
Q Consensus 91 d~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~wcs~ 154 (248)
.+.|.-||+.+|+.+-.... ..+..+-.+...++++|.++.|+.++.|+... | ...|-..
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~--~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~t-G-~~lW~~~ 511 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKME--RFAVWGGTMATAGDLVFYGTLDGYLKARDSDT-G-DLLWKFK 511 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEE--SSCCCSBCEEETTTEEEEECTTSEEEEEETTT-C-CEEEEEE
T ss_pred cCeEEEEECCCCCEEeEecC--CCCccCcceEecCCEEEEECCCCeEEEEECCC-C-CEEEEee
Confidence 46899999999999887764 33444333445789999999999999999755 2 2346543
No 261
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.48 E-value=0.35 Score=41.62 Aligned_cols=110 Identities=11% Similarity=0.015 Sum_probs=67.1
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc--eeEEecCCCCCCeeEEEEcCCc---eeeeC--------
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK--PLRVKDHMYGLPIRDIKFHDNY---VLSMD-------- 90 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~--pl~~~~h~~~~pI~sI~F~~d~---l~Ssd-------- 90 (248)
..+.+++.|++..++.+.... +.|..||+.... ......... . -..|++.+++ ++...
T Consensus 186 ~p~gia~~~dg~~lyv~d~~~-------~~I~~~~~~~~~~~~~~~~~~~~-g-P~gi~~d~~G~l~va~~~~~~~~~~~ 256 (322)
T 2fp8_A 186 VPGGAEVSADSSFVLVAEFLS-------HQIVKYWLEGPKKGTAEVLVKIP-N-PGNIKRNADGHFWVSSSEELDGNMHG 256 (322)
T ss_dssp CCCEEEECTTSSEEEEEEGGG-------TEEEEEESSSTTTTCEEEEEECS-S-EEEEEECTTSCEEEEEEEETTSSTTS
T ss_pred cCcceEECCCCCEEEEEeCCC-------CeEEEEECCCCcCCccceEEeCC-C-CCCeEECCCCCEEEEecCcccccccC
Confidence 456788888777666654432 389999998531 111111121 2 5779999987 33323
Q ss_pred --CCeEEEEECCCCCEEEEeecCC---CCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 91 --SSVVKIWSKDNGSLFTCIESGD---QTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 91 --d~~IKIWD~~tGk~~~tie~~h---~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.+.|..+|.. |+.+..+.... ...+.++++ .++.+.++......|..+.+..
T Consensus 257 ~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 257 RVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp CEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred CCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 3567788875 88888887411 134667776 4555555555678899988654
No 262
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.45 E-value=0.88 Score=38.96 Aligned_cols=121 Identities=14% Similarity=0.177 Sum_probs=71.8
Q ss_pred hcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-ee
Q psy2083 9 DKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VL 87 (248)
Q Consensus 9 ~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~ 87 (248)
...+.++.|..+ .....+++.+++ .++.+.... +.|..||.... ........ .....|+|.+++ +.
T Consensus 20 ~~~~~~~~~p~~--~~pegia~~~~g-~lyv~d~~~-------~~I~~~d~~g~-~~~~~~~~--~~p~gia~~~dG~l~ 86 (306)
T 2p4o_A 20 APAKIITSFPVN--TFLENLASAPDG-TIFVTNHEV-------GEIVSITPDGN-QQIHATVE--GKVSGLAFTSNGDLV 86 (306)
T ss_dssp CCEEEEEEECTT--CCEEEEEECTTS-CEEEEETTT-------TEEEEECTTCC-EEEEEECS--SEEEEEEECTTSCEE
T ss_pred CCceEeEeCCCC--CCcceEEECCCC-CEEEEeCCC-------CeEEEECCCCc-eEEEEeCC--CCceeEEEcCCCcEE
Confidence 345677777654 456788888854 466655433 48999998764 33222222 457899999987 33
Q ss_pred eeC--C-C-eEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 88 SMD--S-S-VVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 88 Ssd--d-~-~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
-++ . + .|-.+|..+|+.............+.+++.+++.++++-..++.|..++.
T Consensus 87 vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~ 145 (306)
T 2p4o_A 87 ATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDV 145 (306)
T ss_dssp EEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEET
T ss_pred EEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeC
Confidence 332 2 2 35556878888644333211234567777665544444335777777764
No 263
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.39 E-value=0.6 Score=40.40 Aligned_cols=109 Identities=13% Similarity=0.242 Sum_probs=72.4
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcC---CCceeEEecC------CCCCCeeEEEEcCCc----eee
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIR---ADKPLRVKDH------MYGLPIRDIKFHDNY----VLS 88 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlR---s~~pl~~~~h------~~~~pI~sI~F~~d~----l~S 88 (248)
....-.+++.|.++.++++.+.+ ...||.++ .+..+.+.++ ..-..+.+|+|+|.. ++|
T Consensus 120 N~g~EGLA~d~~~~~L~va~E~~--------p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS 191 (255)
T 3qqz_A 120 NCGFEGLAYSRQDHTFWFFKEKN--------PIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLS 191 (255)
T ss_dssp SSCCEEEEEETTTTEEEEEEESS--------SEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEE
T ss_pred cCCcceEEEeCCCCEEEEEECcC--------CceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEE
Confidence 34568999999888888877764 34455443 1122332211 011346899999985 777
Q ss_pred eCCCeEEEEECCCCCEEEEeecCCC--------CCeeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 89 MDSSVVKIWSKDNGSLFTCIESGDQ--------TQFNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 89 sdd~~IKIWD~~tGk~~~tie~~h~--------~~In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
..++.+-+.|.+ |+++..+.-... .....++|.|+|. |++.||...+..|
T Consensus 192 ~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f 249 (255)
T 3qqz_A 192 HESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRF 249 (255)
T ss_dssp TTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEE
T ss_pred CCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEEE
Confidence 788899899976 887777654101 2457899999997 6666988876665
No 264
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=95.30 E-value=0.14 Score=50.36 Aligned_cols=113 Identities=6% Similarity=0.017 Sum_probs=65.6
Q ss_pred CeeEEEEe-CCCCcEEEeecCceeeeecCCeeEEEEcCCC-ceeEEecCCCCCCeeEEEEcCCc---eeeeCC-----Ce
Q psy2083 24 QFNNLCHI-PESGMMFIANENKKILTYYIPAFYLYDIRAD-KPLRVKDHMYGLPIRDIKFHDNY---VLSMDS-----SV 93 (248)
Q Consensus 24 ~V~~~~~~-~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-~pl~~~~h~~~~pI~sI~F~~d~---l~Ssdd-----~~ 93 (248)
.+....++ ||+..++-+.+.+ |+...+|.++|+.++ +.+.. +- .....++.|+||+ +.++.+ ..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~---G~~~~~l~v~dl~~g~~~l~~--~~-~~~~~~~~WspDg~~l~y~~~d~~~~~~~ 248 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMS---GNEVYTIEFKRISDPSQTIAD--KV-SGTNGEIVWGPDHTSLFYVTKDETLRENK 248 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESS---SSSCEEEEEEETTCTTCCCCC--CE-EEECSCCEECSSTTEEEEEEECTTCCEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCC---CCceEEEEEEECCCCCEeCCc--cc-cCceeeEEEecCCCEEEEEEECCCCCCCE
Confidence 46678889 8877665433321 111236999999998 63211 10 0113568899997 334432 36
Q ss_pred EEEEECCCCCE--EEEeecCCCCCeeEEEEeCCCCEEEEEeCC---CeEEEEEc
Q psy2083 94 VKIWSKDNGSL--FTCIESGDQTQFNNLCHIPESGMMFIANEN---KKILTYYI 142 (248)
Q Consensus 94 IKIWD~~tGk~--~~tie~~h~~~In~l~~~pdsgll~sa~ed---~~I~~w~I 142 (248)
|..|++.++.. ...++..+..-..++.++|||..|+..+.+ ..|.++++
T Consensus 249 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~ 302 (751)
T 2xe4_A 249 VWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDL 302 (751)
T ss_dssp EEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEES
T ss_pred EEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEEC
Confidence 88889887642 233332113345578999999877766532 34444444
No 265
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.26 E-value=1.1 Score=39.46 Aligned_cols=142 Identities=12% Similarity=0.028 Sum_probs=85.6
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC---CCeEEEEE
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD---SSVVKIWS 98 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd---d~~IKIWD 98 (248)
....+++.+.++.++.+.... +.|.++|+............- ..-+.|+++|.. +.-+| ...|...+
T Consensus 80 ~p~glavd~~~g~ly~~d~~~-------~~I~~~~~dG~~~~~l~~~~~-~~P~giavdp~~g~ly~td~~~~~~I~r~~ 151 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSET-------NRIEVSNLDGSLRKVLFWQEL-DQPRAIALDPSSGFMYWTDWGEVPKIERAG 151 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTT-------TEEEEEETTSCSCEEEECSSC-SSEEEEEEEGGGTEEEEEECSSSCEEEEEE
T ss_pred CccEEEEEcCCCeEEEEECCC-------CEEEEEECCCCcEEEEEeCCC-CCccEEEEeCCCCEEEEEecCCCCEEEEEE
Confidence 345677776677766654433 489999987653322222221 345899999864 44444 46777777
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCCCCCCCCccccccchhh-hhhccccccccCCcee
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPSLGPAPKWCGFLDNLTE-ELEENIIENVYDDYKF 176 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~lG~aP~wcs~ld~~te-e~e~~~~~~~yd~y~f 176 (248)
.+ |+....+-...-...|.++++|+++.|+.+. ...+|..++.. | +....+.+ .+.....-++++++-|
T Consensus 152 ~d-G~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d--G------~~~~~~~~~~~~~P~glav~~~~ly 222 (318)
T 3sov_A 152 MD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD--G------TNRQAVVKGSLPHPFALTLFEDILY 222 (318)
T ss_dssp TT-SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--S------CSCEEEECSCCSCEEEEEEETTEEE
T ss_pred cC-CCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCC--C------CceEEEecCCCCCceEEEEeCCEEE
Confidence 76 5544444321145679999999888777775 45788888764 2 22222222 3333334567888999
Q ss_pred ecHhHH
Q psy2083 177 VTRQEL 182 (248)
Q Consensus 177 vt~~~l 182 (248)
+|...-
T Consensus 223 wtd~~~ 228 (318)
T 3sov_A 223 WTDWST 228 (318)
T ss_dssp EEETTT
T ss_pred EEecCC
Confidence 985443
No 266
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.22 E-value=1.1 Score=40.29 Aligned_cols=111 Identities=7% Similarity=-0.001 Sum_probs=71.8
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee--eCCCeEEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS--MDSSVVKIWS 98 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S--sdd~~IKIWD 98 (248)
.....+.+.+.++.++.+.... +.|..+|+..+........+- .....|++.+.. |.- +..+.|.+.+
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~-------~~I~r~~~~g~~~~~~~~~~~-~~p~glavd~~~g~lY~~d~~~~~I~~~~ 187 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTL-------DRILRANLNGSNVEEVVSTGL-ESPGGLAVDWVHDKLYWTDSGTSRIEVAN 187 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTT-------TEEEEEETTSCCEEEEECSSC-SCCCCEEEETTTTEEEEEETTTTEEEECB
T ss_pred CccEEEEEecCCCeEEEEeCCC-------CcEEEEecCCCCcEEEEeCCC-CCccEEEEEeCCCeEEEEcCCCCeEEEEe
Confidence 5677899998888888765544 489999998765433332221 234678888643 433 3467888888
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC--CeEEEEEc
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN--KKILTYYI 142 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed--~~I~~w~I 142 (248)
.+.......+.. .....+.+++.|.++.|+.+... ++|..++.
T Consensus 188 ~dg~~~~~l~~~-~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~ 232 (386)
T 3v65_B 188 LDGAHRKVLLWQ-SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 232 (386)
T ss_dssp TTSCSCEEEECS-SCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred CCCCceEEeecC-CCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeC
Confidence 874333333333 14678999999988877777643 56666653
No 267
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=94.78 E-value=2 Score=37.93 Aligned_cols=145 Identities=13% Similarity=0.052 Sum_probs=86.8
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC--C-CeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD--S-SVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd--d-~~IKIW 97 (248)
.....+++.+.++.++.+.... +.|.+.|+............ -..-+.|+++|.. +.-+| . +.|...
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~-------~~I~~~~~dG~~~~~l~~~~-l~~P~~iavdp~~g~ly~td~~~~~~I~r~ 187 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGT-------SRIEVANLDGAHRKVLLWQS-LEKPRAIALHPMEGTIYWTDWGNTPRIEAS 187 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTT-------TEEEEEETTSCSCEEEECTT-CSCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCccEEEEecCCCeEEEEcCCC-------CeEEEEcCCCCceEEEEeCC-CCCcceEEEecCcCeEEEeccCCCCEEEEE
Confidence 3456788877777776654443 37999998765322222211 1335899999854 44443 3 667778
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCCCCCCCCccccccch-hhhhhccccccccCCce
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPSLGPAPKWCGFLDNL-TEELEENIIENVYDDYK 175 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~lG~aP~wcs~ld~~-tee~e~~~~~~~yd~y~ 175 (248)
|.+ |.....+-...-...|.+++.|+++.|+.+.. .++|..++.. |.. ...+ ...+.....-++++++-
T Consensus 188 ~~d-G~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d--G~~------~~~~~~~~~~~P~giav~~~~l 258 (349)
T 3v64_C 188 SMD-GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD--GSH------RKAVISQGLPHPFAITVFEDSL 258 (349)
T ss_dssp ETT-SCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--SCS------CEEEECSSCSSEEEEEEETTEE
T ss_pred eCC-CCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC--CCc------eEEEEeCCCCCceEEEEECCEE
Confidence 876 54444442211456899999998887777764 4678888753 211 1111 12233334456688999
Q ss_pred eecHhHHhh
Q psy2083 176 FVTRQELED 184 (248)
Q Consensus 176 fvt~~~l~~ 184 (248)
|+|...-..
T Consensus 259 y~td~~~~~ 267 (349)
T 3v64_C 259 YWTDWHTKS 267 (349)
T ss_dssp EEEETTTTE
T ss_pred EEecCCCCe
Confidence 998554433
No 268
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=94.75 E-value=0.62 Score=45.10 Aligned_cols=73 Identities=8% Similarity=0.029 Sum_probs=48.8
Q ss_pred CCeeEEEEcCCCceeEEecCCCCCCeeE--EEEcCCc-eeeeCCCeEEEEECCCCCEEEEeecCCCCCee--EEEEeCCC
Q psy2083 51 IPAFYLYDIRADKPLRVKDHMYGLPIRD--IKFHDNY-VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFN--NLCHIPES 125 (248)
Q Consensus 51 ~G~V~LwDlRs~~pl~~~~h~~~~pI~s--I~F~~d~-l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In--~l~~~pds 125 (248)
.|.+.-||+++++.++...+. .|+.+ +.-..+. .+++.|+.++.+|.+||+.+-+++. ...+. -+.+..||
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l--~~g~~~~P~~y~~~G 527 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMER--FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKI--PSGAIGYPMTYTHKG 527 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEES--SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC--SSCCCSCCEEEEETT
T ss_pred cCeEEEEECCCCCEEeEecCC--CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeC--CCCcEeccEEEEeCC
Confidence 479999999999998876544 33332 2212222 4456799999999999999998875 22222 24555677
Q ss_pred CE
Q psy2083 126 GM 127 (248)
Q Consensus 126 gl 127 (248)
.+
T Consensus 528 ~q 529 (599)
T 1w6s_A 528 TQ 529 (599)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 269
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=94.72 E-value=1.3 Score=38.24 Aligned_cols=114 Identities=14% Similarity=0.183 Sum_probs=77.0
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeee-CCCeEEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSM-DSSVVKIWS 98 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ss-dd~~IKIWD 98 (248)
.+++..+++.|+++.|+++++.+ +.|...|+. ++.+....-.-....-.|++.+++ +++. .++.+-+.+
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~-------~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKP-------AAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETT-------EEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred ccCcceeEEeCCCCEEEEEECCC-------CeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 35789999999888888876665 489999998 665554321111346788888877 4554 356777877
Q ss_pred CCCCC---EEEEeec-----CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 99 KDNGS---LFTCIES-----GDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 99 ~~tGk---~~~tie~-----~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
..... .+..+.. ......-.+++.|+++.|+++++.....+|-+.
T Consensus 98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred cCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 65433 2233321 013445789999999999999988776777665
No 270
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=94.66 E-value=1.5 Score=39.40 Aligned_cols=143 Identities=14% Similarity=0.073 Sum_probs=84.4
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC--C-CeEEEEE
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD--S-SVVKIWS 98 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd--d-~~IKIWD 98 (248)
....+++.+.++.|+.+.... +.|.+.|+...........+- ..-+.|+++|.. |.-+| . +.|...|
T Consensus 160 ~p~glavd~~~g~lY~~d~~~-------~~I~~~~~dg~~~~~l~~~~l-~~P~giavdp~~g~ly~td~~~~~~I~r~~ 231 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGT-------SRIEVANLDGAHRKVLLWQSL-EKPRAIALHPMEGTIYWTDWGNTPRIEASS 231 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTT-------TEEEECBTTSCSCEEEECSSC-SCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred CccEEEEEeCCCeEEEEcCCC-------CeEEEEeCCCCceEEeecCCC-CCCcEEEEEcCCCeEEEeccCCCCEEEEEe
Confidence 456777777777776654443 378888887553322222221 245899999864 44443 3 6677788
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCCCCCCCCccccccchhhhhhccccccccCCceee
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDDYKFV 177 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~~~~yd~y~fv 177 (248)
.+ |.....+-...-...|.++++|+++.|+.+.. ..+|..+++. |...+ .+ +.+.+.....-++++++-|+
T Consensus 232 ~d-G~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d--G~~~~--~~---~~~~~~~P~giav~~~~ly~ 303 (386)
T 3v65_B 232 MD-GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD--GSHRK--AV---ISQGLPHPFAITVFEDSLYW 303 (386)
T ss_dssp TT-SCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTT--SCSCE--EE---ECSSCSSEEEEEEETTEEEE
T ss_pred CC-CCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC--CCeeE--EE---EECCCCCceEEEEECCEEEE
Confidence 76 44444443211456899999998887777764 4678888753 21110 11 11223333345668899999
Q ss_pred cHhHH
Q psy2083 178 TRQEL 182 (248)
Q Consensus 178 t~~~l 182 (248)
|...-
T Consensus 304 td~~~ 308 (386)
T 3v65_B 304 TDWHT 308 (386)
T ss_dssp EETTT
T ss_pred eeCCC
Confidence 86443
No 271
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=94.66 E-value=2.4 Score=38.28 Aligned_cols=145 Identities=14% Similarity=0.061 Sum_probs=89.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC---CCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD---SSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd---d~~IKIW 97 (248)
.....+++.+.++.|+.+.... +.|.+.|+............ ...-+.|+++|.. |.-+| ...|...
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~-------~~I~~~~~~g~~~~~l~~~~-~~~P~~iavdp~~g~ly~td~~~~~~I~~~ 230 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVL-------GTVSVADTKGVKRKTLFREN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 230 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTT-------TEEEEECTTTCSEEEEEECS-SCCEEEEEEETTTTEEEEEECSSSCCEEEE
T ss_pred CCcccEEEEecCCceEEEECCC-------CeEEEEeCCCCceEEEEeCC-CCCcceEEEecccCeEEEEeCCCCCEEEEE
Confidence 4566778777677777665443 48999999876443332222 1335899999854 54444 3578888
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCCCCCCCCccccccchhh---hhhccccccccCC
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPSLGPAPKWCGFLDNLTE---ELEENIIENVYDD 173 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~lG~aP~wcs~ld~~te---e~e~~~~~~~yd~ 173 (248)
+.+ |.....+-...-...|.+++.|+++.|+.+.. ..+|..+++.. +....+.+ .+.....-+++++
T Consensus 231 ~~d-G~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG--------~~~~~~~~~~~~l~~P~gl~v~~~ 301 (400)
T 3p5b_L 231 GLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG--------GNRKTILEDEKRLAHPFSLAVFED 301 (400)
T ss_dssp ETT-SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS--------CCCEEEEECSSTTSSEEEEEEETT
T ss_pred eCC-CCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC--------CccEEEEeCCCCCCCCEEEEEeCC
Confidence 876 54444443211467899999999888888864 46888887542 12222222 2333334567889
Q ss_pred ceeecHhHHhh
Q psy2083 174 YKFVTRQELED 184 (248)
Q Consensus 174 y~fvt~~~l~~ 184 (248)
+-|+|...-..
T Consensus 302 ~lywtd~~~~~ 312 (400)
T 3p5b_L 302 KVFWTDIINEA 312 (400)
T ss_dssp EEEEEESSSCS
T ss_pred EEEEecCCCCe
Confidence 99998644333
No 272
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.52 E-value=2.4 Score=41.06 Aligned_cols=145 Identities=10% Similarity=0.025 Sum_probs=90.2
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC-c-eeeeC---CCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN-Y-VLSMD---SSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d-~-l~Ssd---d~~IKIW 97 (248)
.....+++.+.++.|+.+.... +.|.+.|+..+.........- ..-+.|+++|. + +.-+| ...|...
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~-------~~I~v~~~dG~~~~~l~~~~l-~~P~~iavdp~~G~lY~tD~g~~~~I~r~ 151 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGT-------NRIEVSKLDGQHRQVLVWKDL-DSPRALALDPAEGFMYWTEWGGKPKIDRA 151 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTT-------TEEEEEETTSTTCEEEECSSC-CCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCcceEEEEeCCCEEEEEECCC-------CEEEEEecCCCcEEEEEeCCC-CCcccEEEccCCCeEEEeCCCCCCEEEEE
Confidence 3466788877777777665543 489999987653322221221 23489999985 4 55454 4567777
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCCCCCCCCccccccchhhhhhccccccccCCcee
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPSLGPAPKWCGFLDNLTEELEENIIENVYDDYKF 176 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~lG~aP~wcs~ld~~tee~e~~~~~~~yd~y~f 176 (248)
+.+ |.....+-.+ -...+.+++.++++.|+.+.. ...|..+++.. .. ..-+.+.+.+.-.-++++++-|
T Consensus 152 ~~d-G~~~~~l~~~-~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG--~~------~~v~~~~l~~P~glav~~~~ly 221 (628)
T 4a0p_A 152 AMD-GSERTTLVPN-VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLG--LN------REVIADDLPHPFGLTQYQDYIY 221 (628)
T ss_dssp ETT-SCSCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEETTS--CS------CEEEEECCSCEEEEEEETTEEE
T ss_pred eCC-CCceEEEECC-CCCcceEEEccccCEEEEEECCCCEEEEEcCCC--Cc------eEEeeccCCCceEEEEECCEEE
Confidence 776 4444443331 578899999999888888865 46788887642 21 1222233443345677899999
Q ss_pred ecHhHHhhc
Q psy2083 177 VTRQELEDL 185 (248)
Q Consensus 177 vt~~~l~~l 185 (248)
+|...-..+
T Consensus 222 ~tD~~~~~I 230 (628)
T 4a0p_A 222 WTDWSRRSI 230 (628)
T ss_dssp EEETTTTEE
T ss_pred EecCCCCEE
Confidence 996544333
No 273
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=94.47 E-value=2.4 Score=37.43 Aligned_cols=111 Identities=8% Similarity=0.017 Sum_probs=71.7
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eee--eCCCeEEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLS--MDSSVVKIWS 98 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~S--sdd~~IKIWD 98 (248)
.....+.+.+.++.++.+.... +.|..+|+..+........+- .....|++.+.. |.- +..+.|.+.+
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~-------~~I~r~~~~g~~~~~~~~~~~-~~p~glavd~~~g~ly~~d~~~~~I~~~~ 144 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTL-------DRILRANLNGSNVEEVVSTGL-ESPGGLAVDWVHDKLYWTDSGTSRIEVAN 144 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTT-------TEEEEEETTSCSCEEEECSSC-SCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CceEEEEEeccccEEEEEeccC-------CceEEEecCCCCceEEEeCCC-CCccEEEEecCCCeEEEEcCCCCeEEEEc
Confidence 4567888888888888765543 489999998765433332221 234688998643 433 3467899999
Q ss_pred CCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC--CeEEEEEc
Q psy2083 99 KDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN--KKILTYYI 142 (248)
Q Consensus 99 ~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed--~~I~~w~I 142 (248)
.+ |+....+....-...+++++.|.++.|+.+... ++|..++.
T Consensus 145 ~d-G~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~ 189 (349)
T 3v64_C 145 LD-GAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 189 (349)
T ss_dssp TT-SCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred CC-CCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeC
Confidence 87 443333332124678999999987777766543 56766654
No 274
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=94.34 E-value=0.22 Score=42.78 Aligned_cols=98 Identities=15% Similarity=0.151 Sum_probs=61.8
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC-Cce--eEEecCCCCCCeeEEEEcCCc-eeee--CCCeEEEEE
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA-DKP--LRVKDHMYGLPIRDIKFHDNY-VLSM--DSSVVKIWS 98 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~p--l~~~~h~~~~pI~sI~F~~d~-l~Ss--dd~~IKIWD 98 (248)
.+.+ +++++.++.+.... +.|..||+.. ++. ....... ..-..+++++++ +..+ ..+.|.++|
T Consensus 171 pngi--s~dg~~lyv~d~~~-------~~I~~~~~~~~g~~~~~~~~~~~--~~P~gi~vd~dG~l~va~~~~~~V~~~~ 239 (306)
T 2p4o_A 171 ANGL--KRFGNFLYVSNTEK-------MLLLRIPVDSTDKPGEPEIFVEQ--TNIDDFAFDVEGNLYGATHIYNSVVRIA 239 (306)
T ss_dssp EEEE--EEETTEEEEEETTT-------TEEEEEEBCTTSCBCCCEEEEES--CCCSSEEEBTTCCEEEECBTTCCEEEEC
T ss_pred CCCc--CcCCCEEEEEeCCC-------CEEEEEEeCCCCCCCccEEEecc--CCCCCeEECCCCCEEEEeCCCCeEEEEC
Confidence 3444 66666676665543 4899999875 321 1111111 234678899887 3333 467888999
Q ss_pred CCCCCEEE--EeecCCCCCeeEEEEe---CCCCEEEEEeCCC
Q psy2083 99 KDNGSLFT--CIESGDQTQFNNLCHI---PESGMMFIANENK 135 (248)
Q Consensus 99 ~~tGk~~~--tie~~h~~~In~l~~~---pdsgll~sa~ed~ 135 (248)
.. |+... .+... ....++++|. ||++.|++++..+
T Consensus 240 ~~-G~~~~~~~~~~~-~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 240 PD-RSTTIIAQAEQG-VIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp TT-CCEEEEECGGGT-CTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred CC-CCEEEEeecccc-cCCceEEEEecccCCCCEEEEECCCC
Confidence 86 77643 34431 3568899998 8988888877543
No 275
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.27 E-value=1.5 Score=38.23 Aligned_cols=115 Identities=14% Similarity=0.209 Sum_probs=68.0
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC---CCCCCeeEEEEcCCc--eeeeCCCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH---MYGLPIRDIKFHDNY--VLSMDSSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h---~~~~pI~sI~F~~d~--l~Ssdd~~IKIW 97 (248)
..+..+.+.+++ .+++++.++ .+++++...++-...... ..+..+.+|.|.++. ++.+.++.| .+
T Consensus 205 ~~~~~~~~~~~g-~~~~~~~~G--------~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~ 274 (327)
T 2xbg_A 205 RRLHNMGFTPDG-RLWMIVNGG--------KIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LC 274 (327)
T ss_dssp SCEEEEEECTTS-CEEEEETTT--------EEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EE
T ss_pred CccceeEECCCC-CEEEEeCCc--------eEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EE
Confidence 355666666644 455555553 566553211221111110 112458899998766 555667777 67
Q ss_pred ECCCCCEEEEeecC--CCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCC
Q psy2083 98 SKDNGSLFTCIESG--DQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAP 149 (248)
Q Consensus 98 D~~tGk~~~tie~~--h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP 149 (248)
..+.|+..+.+... .+..+.++.|.++ +.+++++.++.|..+.- ..-++|
T Consensus 275 S~DgG~tW~~~~~~~~~~~~~~~v~~~~~-~~~~~~G~~G~i~~~~~-~~~~~~ 326 (327)
T 2xbg_A 275 SQDGGQTWQQDVDVKKVPSNFYKILFFSP-DQGFILGQKGILLRYVT-DLTAAP 326 (327)
T ss_dssp ESSTTSSCEECGGGTTSSSCCCEEEEEET-TEEEEECSTTEEEEECC-CCTTC-
T ss_pred eCCCCcccEEcCccCCCCCCeEEEEEECC-CceEEEcCCceEEEEcC-cccCCC
Confidence 77778888877621 1357889999754 45777888998887753 444444
No 276
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=93.74 E-value=0.69 Score=42.44 Aligned_cols=107 Identities=12% Similarity=0.139 Sum_probs=64.6
Q ss_pred CeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCC-----CeEE
Q psy2083 24 QFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDS-----SVVK 95 (248)
Q Consensus 24 ~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd-----~~IK 95 (248)
....+++.| +++.|+.+.... .|+.+|+..+........ ...-..|+|++++ |..++. +..-
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~--------~I~~id~~~~~v~~~~~~--~~~P~~ia~d~~G~~lyvad~~~~~~~~~v 207 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQH--------PTRLIDFEKEYVSTVYSG--LSKVRTICWTHEADSMIITNDQNNNDRPNN 207 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTE--------EEEEEETTTTEEEEEECC--CSCEEEEEECTTSSEEEEEECCSCTTSEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCC--------cEEEEECCCCEEEEEecC--CCCcceEEEeCCCCEEEEEeCCCCcccceE
Confidence 346778887 467777775543 799999987654333222 2456899999986 444432 1122
Q ss_pred EEECCCCCEE--EEeecCCCCCeeEEEEeCCCCEEEEE-eCCCeEEEEEc
Q psy2083 96 IWSKDNGSLF--TCIESGDQTQFNNLCHIPESGMMFIA-NENKKILTYYI 142 (248)
Q Consensus 96 IWD~~tGk~~--~tie~~h~~~In~l~~~pdsgll~sa-~ed~~I~~w~I 142 (248)
+|...+|... ..+.. ....+++++.|+.+.|+.+ ..+++|..|+.
T Consensus 208 ~~~~~~g~~~~~~~l~~--~~~p~giavdp~~g~lyv~d~~~~~V~~~~~ 255 (430)
T 3tc9_A 208 YILTRESGFKVITELTK--GQNCNGAETHPINGELYFNSWNAGQVFRYDF 255 (430)
T ss_dssp EEEEGGGTSCSEEEEEE--CSSCCCEEECTTTCCEEEEETTTTEEEEEET
T ss_pred EEEeCCCceeeeeeecc--CCCceEEEEeCCCCEEEEEECCCCEEEEEEC
Confidence 3333444432 34433 3456788999944444544 46678888874
No 277
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=93.71 E-value=3.1 Score=35.96 Aligned_cols=143 Identities=13% Similarity=0.047 Sum_probs=86.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC--C-CeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD--S-SVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd--d-~~IKIW 97 (248)
.....+++.+.++.++.+.... +.|.++|+............ ...-+.|+++|.. +.-+| . +.|...
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~-------~~I~~~~~~g~~~~~~~~~~-~~~P~~iavdp~~g~ly~~d~~~~~~I~~~ 148 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVL-------GTVSVADTKGVKRKTLFREN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 148 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTT-------TEEEEEETTSSSEEEEEECT-TCCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCcCEEEEeecCCeEEEEECCC-------CEEEEEeCCCCceEEEEECC-CCCcceEEeCCCCCEEEEEccCCCCeEEEE
Confidence 3456777776677776654433 48999998765332222211 1345899999854 43332 2 577777
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCCCCCCCCccccccchh---hhhhccccccccCC
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPSLGPAPKWCGFLDNLT---EELEENIIENVYDD 173 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~lG~aP~wcs~ld~~t---ee~e~~~~~~~yd~ 173 (248)
+.+ |+....+-...-...|.+++.|+++.|+.+.. ..+|..++.. |. +...+. +.+..-..-+++++
T Consensus 149 ~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d--g~------~~~~~~~~~~~~~~P~giav~~~ 219 (316)
T 1ijq_A 149 GLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN--GG------NRKTILEDEKRLAHPFSLAVFED 219 (316)
T ss_dssp ETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--SC------SCEEEEECTTTTSSEEEEEEETT
T ss_pred cCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecC--CC------ceEEEeecCCccCCcEEEEEECC
Confidence 775 66555553211457889999998888877764 4689888864 21 122221 12332234566789
Q ss_pred ceeecHhHH
Q psy2083 174 YKFVTRQEL 182 (248)
Q Consensus 174 y~fvt~~~l 182 (248)
+-|+|...-
T Consensus 220 ~ly~~d~~~ 228 (316)
T 1ijq_A 220 KVFWTDIIN 228 (316)
T ss_dssp EEEEEETTT
T ss_pred EEEEEECCC
Confidence 999986543
No 278
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=93.67 E-value=1.8 Score=39.70 Aligned_cols=131 Identities=8% Similarity=0.053 Sum_probs=73.4
Q ss_pred cccchhcCceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCC-eeEEEEcCCCce-eEEecCCCCCCeeEEEE
Q psy2083 4 QELRQDKGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP-AFYLYDIRADKP-LRVKDHMYGLPIRDIKF 81 (248)
Q Consensus 4 ~~~~~~~G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G-~V~LwDlRs~~p-l~~~~h~~~~pI~sI~F 81 (248)
+.+++.+|...+.... ......+++.+++. ++.+...+. .+. .+...+...+.. -...... ..-+.|++
T Consensus 165 ~~id~~~g~v~~~~~~--~~~P~giavd~dG~-lyVad~~~~----~~~~gv~~~~~~~~~~~~~~~~~~--~~P~giav 235 (433)
T 4hw6_A 165 RHVDFVNQYVDIKTTN--IGQCADVNFTLNGD-MVVVDDQSS----DTNTGIYLFTRASGFTERLSLCNA--RGAKTCAV 235 (433)
T ss_dssp EEEETTTTEEEEECCC--CSCEEEEEECTTCC-EEEEECCSC----TTSEEEEEECGGGTTCCEEEEEEC--SSBCCCEE
T ss_pred EEEECCCCEEEEeecC--CCCccEEEECCCCC-EEEEcCCCC----cccceEEEEECCCCeecccccccc--CCCCEEEE
Confidence 3466666665555443 35678999999877 665544210 000 133333322210 0111111 23467889
Q ss_pred cC-Cc-ee--eeCCCeEEEEECCCCCEEEEee-cCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcC
Q psy2083 82 HD-NY-VL--SMDSSVVKIWSKDNGSLFTCIE-SGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIP 143 (248)
Q Consensus 82 ~~-d~-l~--Ssdd~~IKIWD~~tGk~~~tie-~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip 143 (248)
++ ++ |. ...++.|..+|..+|.....+- .+....-+.++|+|+++.|+.+. ...+|..++..
T Consensus 236 d~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 236 HPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp CTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred eCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 98 55 33 3357789999999888734332 21122334699999999555555 55788887753
No 279
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=92.83 E-value=2.7 Score=38.29 Aligned_cols=111 Identities=14% Similarity=0.263 Sum_probs=69.2
Q ss_pred CCeeEEEE--eCCCCc--EEEeecCceeeeecCCeeEEEEcCC-------CceeEEecCCCCCCeeEEEEcCCc--eeee
Q psy2083 23 TQFNNLCH--IPESGM--MFIANENKKILTYYIPAFYLYDIRA-------DKPLRVKDHMYGLPIRDIKFHDNY--VLSM 89 (248)
Q Consensus 23 ~~V~~~~~--~~~~g~--l~~ag~d~~~~~~~~G~V~LwDlRs-------~~pl~~~~h~~~~pI~sI~F~~d~--l~Ss 89 (248)
..+..+|. .|.++. +|+.+.+ |.+..|++.. .+.+..+.-+ ..+-.+...+.. |.-+
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~--------G~~~q~~l~~~~~g~~~~~lVR~f~lg--sq~EgcvvDd~~g~Lyv~ 197 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKE--------GEFEQYELKADKNGYISGKKVRAFKMN--SQTEGMAADDEYGRLYIA 197 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSS--------SEEEEEEEEECTTSCEEEEEEEEEECS--SCEEEEEEETTTTEEEEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCC--------CeEEEEEEEeCCCCcccceEEEEecCC--CCcceEEEcCCCCeEEEe
Confidence 45677888 455553 5555555 4899999832 2444554443 567888888764 4444
Q ss_pred -CCCeEEEEECC-----CCCEEEEeecCCC-CCeeEEEEeCC--C-CEEEEEeC-CCeEEEEEcC
Q psy2083 90 -DSSVVKIWSKD-----NGSLFTCIESGDQ-TQFNNLCHIPE--S-GMMFIANE-NKKILTYYIP 143 (248)
Q Consensus 90 -dd~~IKIWD~~-----tGk~~~tie~~h~-~~In~l~~~pd--s-gll~sa~e-d~~I~~w~Ip 143 (248)
.+.-|--+|.+ +++.+..+..++- ..+-.|++.+. + ++|+++|+ +.++.+|+..
T Consensus 198 eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 198 EEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp ETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred cccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 55555555644 3556666543112 47888999654 3 47777775 4689999873
No 280
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=92.54 E-value=1.6 Score=42.84 Aligned_cols=115 Identities=8% Similarity=0.067 Sum_probs=62.9
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc--eeEEecCCCCCCeeEEEEcCCc---eeee---CCCeEEEE
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK--PLRVKDHMYGLPIRDIKFHDNY---VLSM---DSSVVKIW 97 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~--pl~~~~h~~~~pI~sI~F~~d~---l~Ss---dd~~IKIW 97 (248)
.+++|+||+..++.+..+.. .....|.++++.++. ...+..........++.|+||+ ++++ ....|.++
T Consensus 224 ~~~~WspDg~~l~y~~~d~~---~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~ 300 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDET---LRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLL 300 (751)
T ss_dssp SCCEECSSTTEEEEEEECTT---CCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEE
T ss_pred eeEEEecCCCEEEEEEECCC---CCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEE
Confidence 35678888766665544310 001268899998764 2333321212345688999998 3333 24468889
Q ss_pred ECCCCC-EE--EEeecCCCCCeeEEEEeCCCCEEEEEeCC--CeEEEEEcC
Q psy2083 98 SKDNGS-LF--TCIESGDQTQFNNLCHIPESGMMFIANEN--KKILTYYIP 143 (248)
Q Consensus 98 D~~tGk-~~--~tie~~h~~~In~l~~~pdsgll~sa~ed--~~I~~w~Ip 143 (248)
|..+++ .. ..+.++......++.|+.++.+++..+.+ +.-++|-++
T Consensus 301 d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d 351 (751)
T 2xe4_A 301 DLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAP 351 (751)
T ss_dssp ESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEE
T ss_pred ECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEc
Confidence 998763 23 45544223344444444445556666554 444444443
No 281
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=91.97 E-value=9.7 Score=38.00 Aligned_cols=146 Identities=14% Similarity=0.063 Sum_probs=92.0
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC---CCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD---SSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd---d~~IKIW 97 (248)
.....+++.+.++.|+.+.... +.|.+.|+............ ....+.|+++|.. |.-+| ...|...
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~-------~~I~v~~ldG~~~~~l~~~~-l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~ 542 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVL-------GTVSVADTKGVKRKTLFREN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 542 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTT-------TEEEEEETTSSSEEEEEECT-TCCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCcceeeeeecCCcEEEEecCC-------CeEEEEeCCCCeEEEEEeCC-CCCcceEEEecCCCCEEEecCCCCCeEEEE
Confidence 4567788888787887765554 48999999865432222212 1346899999864 54444 3678888
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCCCCCCCCccccccchhh---hhhccccccccCC
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPSLGPAPKWCGFLDNLTE---ELEENIIENVYDD 173 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~lG~aP~wcs~ld~~te---e~e~~~~~~~yd~ 173 (248)
+.+ |.....+-...-...+.|++.|.++.|+.+.. ..+|..+++- |. ....|.. .|...-.-+++.+
T Consensus 543 ~~d-G~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d--G~------~~~~v~~~~~~l~~P~glav~~~ 613 (791)
T 3m0c_C 543 GLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN--GG------NRKTILEDEKRLAHPFSLAVFED 613 (791)
T ss_dssp ETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--SC------SCEEEEECTTTTSSEEEEEEETT
T ss_pred ecC-CCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecC--CC------ceEEEecCCCccCCCCEEEEeCC
Confidence 886 55554443311467899999998888888864 4677777653 21 2222222 1222224467889
Q ss_pred ceeecHhHHhhc
Q psy2083 174 YKFVTRQELEDL 185 (248)
Q Consensus 174 y~fvt~~~l~~l 185 (248)
+-|+|......+
T Consensus 614 ~lYwtD~~~~~I 625 (791)
T 3m0c_C 614 KVFWTDIINEAI 625 (791)
T ss_dssp EEEEEETTTTEE
T ss_pred EEEEEECCCCEE
Confidence 999997665554
No 282
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=91.94 E-value=3.8 Score=37.02 Aligned_cols=90 Identities=11% Similarity=0.190 Sum_probs=61.4
Q ss_pred CeeEEEEcC---CCceeEEecC-------------CCCCCeeEEEEcCCc---eeeeCC-CeEEEEECCCCCEEEEeec-
Q psy2083 52 PAFYLYDIR---ADKPLRVKDH-------------MYGLPIRDIKFHDNY---VLSMDS-SVVKIWSKDNGSLFTCIES- 110 (248)
Q Consensus 52 G~V~LwDlR---s~~pl~~~~h-------------~~~~pI~sI~F~~d~---l~Ssdd-~~IKIWD~~tGk~~~tie~- 110 (248)
..|..||+. ++++++..+- .+ ...+.++..+++ |..+-. +.|-..|.+ |+.+..+..
T Consensus 100 ~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~-~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd-G~~~~~~~~~ 177 (334)
T 2p9w_A 100 SSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRP-FGVVQSAQDRDGNSYVAFALGMPAIARVSAD-GKTVSTFAWE 177 (334)
T ss_dssp CEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCC-EEEEEEEECTTSCEEEEEEESSCEEEEECTT-SCCEEEEEEC
T ss_pred CEEEEEcCCcCCCCCEEEEecCccccccccccccccc-cCCceeEECCCCCEEEeCCCCCCeEEEEeCC-CCEEeeeeec
Confidence 479999999 8887765431 11 247899999987 544544 544444554 554444321
Q ss_pred ----CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC
Q psy2083 111 ----GDQTQFNNLCHIPESGMMFIANENKKILTYYIP 143 (248)
Q Consensus 111 ----~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip 143 (248)
......|.+++.|||.+|+++..++++..+++.
T Consensus 178 ~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 178 SGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp CCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred CCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 012247899999999999999779999999976
No 283
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=91.93 E-value=4.4 Score=38.43 Aligned_cols=132 Identities=11% Similarity=0.086 Sum_probs=72.9
Q ss_pred ccchhcCceeEEEecC--CCCCeeEEEE-------eCCCCcEEEeecCceeeeecCCeeEEEEcCC-Ccee-----EEec
Q psy2083 5 ELRQDKGSLFTCIESG--DQTQFNNLCH-------IPESGMMFIANENKKILTYYIPAFYLYDIRA-DKPL-----RVKD 69 (248)
Q Consensus 5 ~~~~~~G~~~~~~~~~--~~~~V~~~~~-------~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs-~~pl-----~~~~ 69 (248)
.+|..++...+.+..+ .......++| .+++..++++...++- ......|.+.|-.. +... ....
T Consensus 166 ~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~-~~~~~~V~~i~r~~~G~~~~~~~~~~v~ 244 (496)
T 3kya_A 166 LIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK-GDESPSVYIIKRNADGTFDDRSDIQLIA 244 (496)
T ss_dssp EEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT-GGGEEEEEEEECCTTSCCSTTSCEEEEE
T ss_pred EEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCC-cccCceEEEEecCCCCceeecccceeec
Confidence 3566555544444332 0124688888 8877767766554200 00011466776333 1211 1111
Q ss_pred CCCCCCeeEEEEcCCc--eee--eCCCeEEEEECC-------CCCE--------------EEEeecCCCCCeeEEEEeCC
Q psy2083 70 HMYGLPIRDIKFHDNY--VLS--MDSSVVKIWSKD-------NGSL--------------FTCIESGDQTQFNNLCHIPE 124 (248)
Q Consensus 70 h~~~~pI~sI~F~~d~--l~S--sdd~~IKIWD~~-------tGk~--------------~~tie~~h~~~In~l~~~pd 124 (248)
.+. ..+.++++|+. |.- ..++.|..+|.+ +|+. +.++.. ......+||+|+
T Consensus 245 -~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~--~~~p~~ia~~p~ 320 (496)
T 3kya_A 245 -AYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIAD--PSWEFQIFIHPT 320 (496)
T ss_dssp -EES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSS--SSCCEEEEECTT
T ss_pred -cCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCC--CCCceEEEEcCC
Confidence 111 23578889953 333 357789999987 6654 222222 345678999999
Q ss_pred CCEEEEEe-CCCeEEEEE
Q psy2083 125 SGMMFIAN-ENKKILTYY 141 (248)
Q Consensus 125 sgll~sa~-ed~~I~~w~ 141 (248)
|+.|+++. ...+|+.++
T Consensus 321 G~~lYvaD~~~h~I~kid 338 (496)
T 3kya_A 321 GKYAYFGVINNHYFMRSD 338 (496)
T ss_dssp SSEEEEEETTTTEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEe
Confidence 99666664 557888754
No 284
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=91.64 E-value=2 Score=41.25 Aligned_cols=89 Identities=11% Similarity=0.039 Sum_probs=54.7
Q ss_pred eeEEEEcCCCce--eEEecCCCCCCeeEEEEcCCc---eeee-CCCeEEEEECCCCCEEEEeec-CCCCCeeEEEEeCCC
Q psy2083 53 AFYLYDIRADKP--LRVKDHMYGLPIRDIKFHDNY---VLSM-DSSVVKIWSKDNGSLFTCIES-GDQTQFNNLCHIPES 125 (248)
Q Consensus 53 ~V~LwDlRs~~p--l~~~~h~~~~pI~sI~F~~d~---l~Ss-dd~~IKIWD~~tGk~~~tie~-~h~~~In~l~~~pds 125 (248)
.+.+||+.+++. +............++++..++ ++++ ++..+.+||..+++ ...+.+ .....-.++++.+|+
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~-W~~~~~~~~~R~~~s~~~~~dg 298 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS-WIPGPDMQVARGYQSSATMSDG 298 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE-EEECCCCSSCCSSCEEEECTTS
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCc-eeECCCCCccccccceEEecCC
Confidence 689999999853 222211111233457777766 5555 56689999998764 333322 001122356777899
Q ss_pred CEEEEEe-CC-----CeEEEEEc
Q psy2083 126 GMMFIAN-EN-----KKILTYYI 142 (248)
Q Consensus 126 gll~sa~-ed-----~~I~~w~I 142 (248)
.+++.|+ .+ ..+.+|+.
T Consensus 299 ~iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 299 RVFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp CEEEECCCCCSSSCCCCEEEEET
T ss_pred eEEEEeCcccCCcccccceEeCC
Confidence 9999998 34 56888875
No 285
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=91.60 E-value=6.1 Score=34.24 Aligned_cols=104 Identities=12% Similarity=0.154 Sum_probs=61.4
Q ss_pred CCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEc--CCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEE
Q psy2083 22 QTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDI--RADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIW 97 (248)
Q Consensus 22 ~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDl--Rs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIW 97 (248)
...+..+.+.|+ +.+++++..+. ..+-+|- .+=+++. ......+..+.+.+++ ++.+.++.+.++
T Consensus 162 ~~~~~~~~~~~~-~~~~~~g~~G~-------~~~S~d~gG~tW~~~~---~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s 230 (327)
T 2xbg_A 162 IGVMRNLNRSPS-GEYVAVSSRGS-------FYSTWEPGQTAWEPHN---RTTSRRLHNMGFTPDGRLWMIVNGGKIAFS 230 (327)
T ss_dssp CCCEEEEEECTT-SCEEEEETTSS-------EEEEECTTCSSCEEEE---CCSSSCEEEEEECTTSCEEEEETTTEEEEE
T ss_pred CcceEEEEEcCC-CcEEEEECCCc-------EEEEeCCCCCceeECC---CCCCCccceeEECCCCCEEEEeCCceEEEe
Confidence 345677777775 44555555542 3344443 1112221 1223578899998887 556678888887
Q ss_pred ECCCCCEEEEeecC---CCCCeeEEEEeCCCCEEEEEeCCCeE
Q psy2083 98 SKDNGSLFTCIESG---DQTQFNNLCHIPESGMMFIANENKKI 137 (248)
Q Consensus 98 D~~tGk~~~tie~~---h~~~In~l~~~pdsgll~sa~ed~~I 137 (248)
+.+.|+..+.+... +...+.++.+.|++.+++++. ++.|
T Consensus 231 ~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i 272 (327)
T 2xbg_A 231 DPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL 272 (327)
T ss_dssp ETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE
T ss_pred cCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE
Confidence 65557766665420 123588899998877666555 5555
No 286
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=91.29 E-value=8 Score=34.78 Aligned_cols=111 Identities=9% Similarity=-0.036 Sum_probs=70.6
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC----ceeEEecCCCCCCeeEEEEcCC-c-eee--eCCCeE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD----KPLRVKDHMYGLPIRDIKFHDN-Y-VLS--MDSSVV 94 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~----~pl~~~~h~~~~pI~sI~F~~d-~-l~S--sdd~~I 94 (248)
..+..+.|.+.++.++.+.... +.|..+|+... ......... -.....|++.+. + |.- +..+.|
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~-------~~I~~~~~~g~~~~~~~~~~~~~~-~~~p~glavD~~~~~lY~~d~~~~~I 183 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQ-------RMICSTQLDRAHGVSSYDTVISRD-IQAPDGLAVDWIHSNIYWTDSVLGTV 183 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTT-------TEEEEEEC------CCCEEEECSS-CSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CcceEEeeeeccCceEEEecCC-------CeEEEEEcccCCCCCcceEEEeCC-CCCcccEEEEecCCceEEEECCCCeE
Confidence 5788999998888888775543 38899998762 222222212 134678888863 3 443 346789
Q ss_pred EEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC--CeEEEEEc
Q psy2083 95 KIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN--KKILTYYI 142 (248)
Q Consensus 95 KIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed--~~I~~w~I 142 (248)
.+.|.+.+.....+.. .-...+.+++.|.++.|+.+... ++|...+.
T Consensus 184 ~~~~~~g~~~~~l~~~-~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~ 232 (400)
T 3p5b_L 184 SVADTKGVKRKTLFRE-NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 232 (400)
T ss_dssp EEECTTTCSEEEEEEC-SSCCEEEEEEETTTTEEEEEECSSSCCEEEEET
T ss_pred EEEeCCCCceEEEEeC-CCCCcceEEEecccCeEEEEeCCCCCEEEEEeC
Confidence 8999875444444443 14568899999988888777633 56666653
No 287
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=90.85 E-value=7.2 Score=37.93 Aligned_cols=106 Identities=13% Similarity=0.205 Sum_probs=64.9
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCC-------CCCCeeEEEEcCCc--eeeeCCCe
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHM-------YGLPIRDIKFHDNY--VLSMDSSV 93 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~-------~~~pI~sI~F~~d~--l~Ssdd~~ 93 (248)
..|.+++..++ |.+..+..++ -+.+||..+++.... .+. ....|.+|...+++ .+++++ -
T Consensus 215 ~~i~~i~~d~~-g~lwigt~~~--------Gl~~~~~~~~~~~~~-~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-G 283 (795)
T 4a2l_A 215 KQIQAILQQSP-TRIWVATEGA--------GLFLINPKTKEIKNY-LHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-D 283 (795)
T ss_dssp CCEEEEEEEET-TEEEEEEBSS--------CEEEEETTTTEEEEE-CCCTTCTTSCSCSBEEEEEECTTSCEEEEESS-C
T ss_pred CeeEEEEEcCC-CCEEEEECCC--------CeEEEeCCCCeEEEe-ecCCCCccccCCCeEEEEEEcCCCCEEEEeCC-h
Confidence 45666655553 4455554433 388899887643322 221 12469999998877 445555 5
Q ss_pred EEEEECCCCCEEEEeecC-------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 94 VKIWSKDNGSLFTCIESG-------DQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 94 IKIWD~~tGk~~~tie~~-------h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
|.+||..+++. ..+... ....|++++..++|. |.+|+.++-|..|+
T Consensus 284 l~~~~~~~~~~-~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~ 336 (795)
T 4a2l_A 284 LNIYHEGTDSF-ASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYH 336 (795)
T ss_dssp EEEEETTTTEE-EEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEEC
T ss_pred hheEcCCCCeE-EEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeC
Confidence 78999987654 444310 125689999888776 55677666666554
No 288
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=90.53 E-value=8.6 Score=34.04 Aligned_cols=110 Identities=11% Similarity=0.059 Sum_probs=62.1
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc-eeEEec--CCCCCCeeEEEEcCC----c
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK-PLRVKD--HMYGLPIRDIKFHDN----Y 85 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~-pl~~~~--h~~~~pI~sI~F~~d----~ 85 (248)
.+..+..+ -..-..++|.|++. ++++...+ .|+++| ..++ ++.... .........|+|+|+ +
T Consensus 20 ~~~~va~~-l~~P~~ia~~pdG~-l~V~e~~g--------~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g 88 (354)
T 3a9g_A 20 KISEVASD-LEVPWSIAPLGGGR-YLVTERPG--------RLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKS 88 (354)
T ss_dssp EEEEEECS-CSCEEEEEEEETTE-EEEEETTT--------EEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSC
T ss_pred EEEEEeCC-CCCCeEEEEcCCCe-EEEEeCCC--------EEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCC
Confidence 44445544 35678899998655 55554443 788887 3444 332211 111235789999997 3
Q ss_pred -e-ee-eC---C----CeEEEEECCCC--C------EEEEeecCCCCCeeEEEEeCCCCEEEEEeC
Q psy2083 86 -V-LS-MD---S----SVVKIWSKDNG--S------LFTCIESGDQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 86 -l-~S-sd---d----~~IKIWD~~tG--k------~~~tie~~h~~~In~l~~~pdsgll~sa~e 133 (248)
| ++ +. + ..|-.|+...+ . .+..+........+.++|.|||.+.++-++
T Consensus 89 ~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~ 154 (354)
T 3a9g_A 89 WVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGD 154 (354)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCC
T ss_pred EEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECC
Confidence 2 22 22 2 45666776543 1 122233211234678999999987776544
No 289
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=90.17 E-value=9.3 Score=33.65 Aligned_cols=109 Identities=14% Similarity=0.134 Sum_probs=60.9
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCc--eeEEec--CCCCCCeeEEEEcCC----
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADK--PLRVKD--HMYGLPIRDIKFHDN---- 84 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~--pl~~~~--h~~~~pI~sI~F~~d---- 84 (248)
.+..+..+ -..-..++|.|++. ++.+... |.|+++| .++ ++.... .........|+|+|+
T Consensus 22 ~~~~va~~-l~~P~~ia~~pdG~-l~V~e~~--------g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~ 89 (352)
T 2ism_A 22 RVEEVVGG-LEVPWALAFLPDGG-MLIAERP--------GRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQE 89 (352)
T ss_dssp CEEEEECC-CSCEEEEEECTTSC-EEEEETT--------TEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTS
T ss_pred EEEEEECC-CCCceEEEEcCCCe-EEEEeCC--------CeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCC
Confidence 34444443 34567899888765 5555444 3788888 443 222111 111235689999998
Q ss_pred c-e--eeeCC-----CeEEEEECCCCC------EEEEee--cCCCCCeeEEEEeCCCCEEEEEeC
Q psy2083 85 Y-V--LSMDS-----SVVKIWSKDNGS------LFTCIE--SGDQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 85 ~-l--~Ssdd-----~~IKIWD~~tGk------~~~tie--~~h~~~In~l~~~pdsgll~sa~e 133 (248)
+ | +.+.. ..|-.|+...++ .+..+. .+.....+.++|.|||.+.++-++
T Consensus 90 g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~ 154 (352)
T 2ism_A 90 PYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGE 154 (352)
T ss_dssp CEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCC
T ss_pred CEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECC
Confidence 3 3 22322 556667766442 122233 111234578999999977666543
No 290
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=89.67 E-value=9.3 Score=37.14 Aligned_cols=108 Identities=5% Similarity=0.058 Sum_probs=66.3
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCC------CCCCeeEEEEcCCc--eeeeCCCeEE
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHM------YGLPIRDIKFHDNY--VLSMDSSVVK 95 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~------~~~pI~sI~F~~d~--l~Ssdd~~IK 95 (248)
.|.++...+ .|.+-.+..++ -|..||..++.- ....+. ....|.++...+++ -++++++-|.
T Consensus 311 ~i~~i~~D~-~g~lWigt~~~--------Gl~~~~~~~~~~-~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~ 380 (795)
T 4a2l_A 311 SVRSIFMDS-QGGMWLGTYFG--------GLNYYHPIRNRF-KNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLN 380 (795)
T ss_dssp CEEEEEECT-TSCEEEEESSS--------CEEEECGGGGSS-EEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEE
T ss_pred cEEEEEEeC-CcCEEEEECCC--------CeEEeCCCcccc-eEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeE
Confidence 455554444 45555555443 478888766532 222111 12468999988887 5566776788
Q ss_pred EEECCCCCEEEEeecC-------CCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 96 IWSKDNGSLFTCIESG-------DQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 96 IWD~~tGk~~~tie~~-------h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
.||..+++...-.... ....|.+++..++|.+|.+|+.++-+..|+
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 381 LYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILH 433 (795)
T ss_dssp EECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEE
T ss_pred EEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEe
Confidence 9999877643322110 025688999888888577777766666665
No 291
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=89.62 E-value=5.5 Score=36.43 Aligned_cols=110 Identities=10% Similarity=-0.004 Sum_probs=63.3
Q ss_pred eeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce-eEEecCCCCCCeeEEEEcCCc--eee--eCCCeEEEEEC
Q psy2083 25 FNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP-LRVKDHMYGLPIRDIKFHDNY--VLS--MDSSVVKIWSK 99 (248)
Q Consensus 25 V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p-l~~~~h~~~~pI~sI~F~~d~--l~S--sdd~~IKIWD~ 99 (248)
.+.+++.|++|.++.+.... +.|..+|..++.. ......+....-..|+|+|++ |.- ...+.|..+|.
T Consensus 230 P~giavd~~~G~lyv~d~~~-------~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~ 302 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHH-------AMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDY 302 (433)
T ss_dssp BCCCEECTTTCCEEECBTTC-------SEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEB
T ss_pred CCEEEEeCCCCeEEEEECCC-------CEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeC
Confidence 45677777677777665543 4899999987654 122222211222469999987 333 45678888775
Q ss_pred C--CCCE--EEEeec--C------------CCCCeeEEEE---------eCCCCEEEEEeCCCeEEEEE
Q psy2083 100 D--NGSL--FTCIES--G------------DQTQFNNLCH---------IPESGMMFIANENKKILTYY 141 (248)
Q Consensus 100 ~--tGk~--~~tie~--~------------h~~~In~l~~---------~pdsgll~sa~ed~~I~~w~ 141 (248)
+ ++.. ...+.+ + .-...+.+++ .++|.+.++-....+|+.++
T Consensus 303 d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 303 NRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp CTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred CCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence 5 4432 122221 0 0123567999 55555555445567888775
No 292
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=89.60 E-value=7.8 Score=33.77 Aligned_cols=109 Identities=14% Similarity=0.124 Sum_probs=70.0
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce-eEEecCCCCCCeeEEEEcCC-c-eeee--CCCeEEEEE
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP-LRVKDHMYGLPIRDIKFHDN-Y-VLSM--DSSVVKIWS 98 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p-l~~~~h~~~~pI~sI~F~~d-~-l~Ss--dd~~IKIWD 98 (248)
.+..+.|.+.++.++-+.... +.|..+|+..+.. ......+- .....|++.+. + |.-+ ..+.|.+.|
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~-------~~I~r~~~~g~~~~~~~~~~~l-~~p~glavd~~~g~ly~~d~~~~~I~~~~ 107 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSE-------EAIKRTEFNKTESVQNVVVSGL-LSPDGLACDWLGEKLYWTDSETNRIEVSN 107 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTT-------TEEEEEETTSSSCCCEEEEECC-SCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ccEEEEEEeCCCEEEEEECCC-------CcEEEEEccCCCceEEEEcCCC-CCccEEEEEcCCCeEEEEECCCCEEEEEE
Confidence 467788888778887765543 4899999987632 11111111 23567888864 3 4333 467899999
Q ss_pred CCCCCEEEEee-cCCCCCeeEEEEeCCCCEEEEEeC--CCeEEEEEc
Q psy2083 99 KDNGSLFTCIE-SGDQTQFNNLCHIPESGMMFIANE--NKKILTYYI 142 (248)
Q Consensus 99 ~~tGk~~~tie-~~h~~~In~l~~~pdsgll~sa~e--d~~I~~w~I 142 (248)
.+ |+....+. . .....+.+++.|.++.|+.+.. .++|...+.
T Consensus 108 ~d-G~~~~~l~~~-~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~ 152 (318)
T 3sov_A 108 LD-GSLRKVLFWQ-ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGM 152 (318)
T ss_dssp TT-SCSCEEEECS-SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEET
T ss_pred CC-CCcEEEEEeC-CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEc
Confidence 87 44434443 3 2467899999998888887763 466666653
No 293
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=89.20 E-value=5.2 Score=37.92 Aligned_cols=111 Identities=18% Similarity=0.231 Sum_probs=68.0
Q ss_pred CeeEEEEeC-CCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCC--CCCeeEEEE-------cCCc--eeeeCC
Q psy2083 24 QFNNLCHIP-ESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMY--GLPIRDIKF-------HDNY--VLSMDS 91 (248)
Q Consensus 24 ~V~~~~~~~-~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~--~~pI~sI~F-------~~d~--l~Ssdd 91 (248)
....++|.| +.+.|+++.... +.|++.|+..+.......-+. -.....|+| ++++ +..+++
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~-------~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~ 212 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGH-------KAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAID 212 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETE-------EEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEEC
T ss_pred CCCEEEEccCCCCEEEEEECCC-------CeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeC
Confidence 356788888 467788776654 279999999875433322111 113788999 8886 444432
Q ss_pred C--------eEEEEECCC-CCEE-----EEeecCCCCCeeEEEEeCCCCEEEEE-eCCCeEEEEEcC
Q psy2083 92 S--------VVKIWSKDN-GSLF-----TCIESGDQTQFNNLCHIPESGMMFIA-NENKKILTYYIP 143 (248)
Q Consensus 92 ~--------~IKIWD~~t-Gk~~-----~tie~~h~~~In~l~~~pdsgll~sa-~ed~~I~~w~Ip 143 (248)
. .|-+.+... |+.. ..+.. -...+.+++.|+++.|+.+ ..+++|..|++.
T Consensus 213 ~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~--~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 213 YDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA--YKQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp CCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE--ESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred CCCCcccCceEEEEecCCCCceeecccceeecc--CCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 2 255666554 3321 23322 2345678999966665555 466789999864
No 294
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=88.92 E-value=3.1 Score=35.81 Aligned_cols=115 Identities=15% Similarity=0.234 Sum_probs=65.5
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCcee-------EEecCCCCCCeeEEEEcCCc-eeeeCCCeE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPL-------RVKDHMYGLPIRDIKFHDNY-VLSMDSSVV 94 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl-------~~~~h~~~~pI~sI~F~~d~-l~Ssdd~~I 94 (248)
..+..++|.| +|.|+++ .++ .+.-.|..+.... .+=..+... -..+.|++++ |..+.|+.|
T Consensus 41 ~~~~~laf~P-~G~LYaV-~~G--------~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav~dG~i 109 (236)
T 1tl2_A 41 SNFKFLFLSP-GGELYGV-LND--------KIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAVSKDKL 109 (236)
T ss_dssp TTCSEEEECT-TSCEEEE-ETT--------EEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEEETTEE
T ss_pred ccceeEEECC-CccEEEE-eCC--------eEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEeCCCEE
Confidence 4677899999 7778888 443 5555554442211 111111111 4889999998 444455777
Q ss_pred EEEECCC-CC-EE----EEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCCCCCCCCc
Q psy2083 95 KIWSKDN-GS-LF----TCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPSLGPAPKW 151 (248)
Q Consensus 95 KIWD~~t-Gk-~~----~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~lG~aP~w 151 (248)
-=|+.-+ +. .+ +.+-.+-=..+..|.|.|+|.+.++. |+++.-. .|..++-..|
T Consensus 110 yr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~-~~P~~~~~~w 169 (236)
T 1tl2_A 110 YKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKA-LPPVSNQDNW 169 (236)
T ss_dssp EEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEE-CCCSSTTCCH
T ss_pred EEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEec-CCCCCCCccc
Confidence 5566522 21 11 11111001478899999999877766 7776544 3445666667
No 295
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=88.92 E-value=7.6 Score=35.00 Aligned_cols=114 Identities=13% Similarity=0.138 Sum_probs=65.7
Q ss_pred CeeEEEEeCC-CC--cEEEeecCceeeeecCCeeEEEEcCCC-ce---eEEecCCCCCCeeEEEEcCCc--eeeeC----
Q psy2083 24 QFNNLCHIPE-SG--MMFIANENKKILTYYIPAFYLYDIRAD-KP---LRVKDHMYGLPIRDIKFHDNY--VLSMD---- 90 (248)
Q Consensus 24 ~V~~~~~~~~-~g--~l~~ag~d~~~~~~~~G~V~LwDlRs~-~p---l~~~~h~~~~pI~sI~F~~d~--l~Ssd---- 90 (248)
....+.++++ +| .|+++.... ..++|.||++... .. +....+..-...|++.+.+++ .++.+
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~-----~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ft 187 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPG-----SSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFI 187 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECST-----TCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCS
T ss_pred eeeeeEEEECCCCcEEEEEEECCC-----CCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeC
Confidence 3455555552 22 366664431 2358888887654 21 222333322357889999887 33332
Q ss_pred C------------CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCC
Q psy2083 91 S------------SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPS 144 (248)
Q Consensus 91 d------------~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~ 144 (248)
| ..=+||-...++......+ -.-.|.++|+||+..|..+. ..++|..|++..
T Consensus 188 d~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~~--l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 188 DPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEG--FDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp SHHHHHHHHHTTCCCEEEEEECTTCCEEEEEE--ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CcccccchhhccCCccEEEEEECCeEEEeecC--CcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 1 1223433333443333333 46789999999998877775 568999999853
No 296
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=88.34 E-value=0.88 Score=44.63 Aligned_cols=110 Identities=9% Similarity=-0.032 Sum_probs=66.3
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCC----CceeEEecCCCCCCeeEEEEcCC-c-eeee--CCCeE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRA----DKPLRVKDHMYGLPIRDIKFHDN-Y-VLSM--DSSVV 94 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs----~~pl~~~~h~~~~pI~sI~F~~d-~-l~Ss--dd~~I 94 (248)
..+..+++.+.++.|+.+.... +.|+.+|+.. .........+. .....|++.+. + |.-+ ..+.|
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~-------~~I~~~~~~g~~~~~~~~~~i~~~~-~~P~glavD~~~g~LY~tD~~~~~I 477 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQ-------RMICSTQLDRAHGVSSYDTVISRDI-QAPDGLAVDWIHSNIYWTDSVLGTV 477 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTT-------TSBEEEESCCCCC-CCCCCBCCSCC---CCCEECCCSSSBCEECCTTTSCE
T ss_pred cceEEEccccccCeEEEEecCC-------CeEEEEecCCCCCCcceEEEEeCCC-CCcceEEEEeeCCcEEEEeccCCeE
Confidence 4567888888888888775543 4899999875 22211111111 12456888743 3 4433 46788
Q ss_pred EEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC--CeEEEEE
Q psy2083 95 KIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN--KKILTYY 141 (248)
Q Consensus 95 KIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed--~~I~~w~ 141 (248)
.+.|...+.....+.. .....+.+++.|.++.|+.+... ++|..++
T Consensus 478 ~v~d~dg~~~~~l~~~-~~~~P~giavDp~~g~ly~td~~~~~~I~~~~ 525 (699)
T 1n7d_A 478 SVADTKGVKRKTLFRE-QGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 525 (699)
T ss_dssp EEEBSSSCCEEEECCC-SSCCCCCEECCSSSSCCEECCCSSSCCEEBCC
T ss_pred EEEecCCCceEEEEeC-CCCCcceEEEccCCCcEEEcccCCCCeEEEEe
Confidence 9999874443333332 13567889999988877776543 5665554
No 297
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=88.22 E-value=19 Score=34.60 Aligned_cols=146 Identities=11% Similarity=0.051 Sum_probs=88.9
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCC-c-eeeeC---CCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDN-Y-VLSMD---SSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d-~-l~Ssd---d~~IKIW 97 (248)
.....+++...++.|+.+.... +.|.+.++...........+- ..-++|+++|. + +.-+| ...|.-.
T Consensus 392 ~~p~GlAvD~~~~~lY~tD~~~-------~~I~v~~~~G~~~~~l~~~~l-~~P~~iavdp~~G~ly~tD~g~~~~I~r~ 463 (619)
T 3s94_A 392 AHPDGIAVDWVARNLYWTDTGT-------DRIEVTRLNGTMRKILISEDL-EEPRAIVLDPMVGYMYWTDWGEIPKIERA 463 (619)
T ss_dssp SCCCEEEEETTTTEEEEEETTT-------TEEEEEETTSCSCEEEECTTC-CSEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCcCceEEecccCcEEEEeCCC-------CcEEEEeCCCCeEEEEEECCC-CCeeeEEEEcCCCcEEEecCCCCCEEEEE
Confidence 4566788877777777765443 488998887653211222221 24589999986 4 54444 2455555
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC-CeEEEEEcCCCCCCCCccccccchh-hhhhccccccccCCce
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN-KKILTYYIPSLGPAPKWCGFLDNLT-EELEENIIENVYDDYK 175 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed-~~I~~w~Ip~lG~aP~wcs~ld~~t-ee~e~~~~~~~yd~y~ 175 (248)
+.+ |.....+-...-...|.+++.++++.|..+... ++|..+++- |.. ...+. .++.+-..-++++|+-
T Consensus 464 ~~d-G~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~d--G~~------~~~~~~~~l~~P~glav~~~~l 534 (619)
T 3s94_A 464 ALD-GSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTD--GTG------RRVLVEDKIPHIFGFTLLGDYV 534 (619)
T ss_dssp ETT-SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESS--SCC------CEEEEECCCCSSCCEEEETTEE
T ss_pred ccC-CCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecC--CCc------eEEEeccCCCCcEEEEEECCEE
Confidence 554 554444432124678999999988888888654 678887763 222 11221 2333334457899999
Q ss_pred eecHhHHhhc
Q psy2083 176 FVTRQELEDL 185 (248)
Q Consensus 176 fvt~~~l~~l 185 (248)
|+|...-..+
T Consensus 535 y~tD~~~~~I 544 (619)
T 3s94_A 535 YWTDWQRRSI 544 (619)
T ss_dssp EEECTTSSCE
T ss_pred EEeecCCCeE
Confidence 9997655544
No 298
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=87.90 E-value=23 Score=35.26 Aligned_cols=111 Identities=9% Similarity=-0.024 Sum_probs=69.7
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC----ceeEEecCCCCCCeeEEEEcCCc--eeee--CCCeE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD----KPLRVKDHMYGLPIRDIKFHDNY--VLSM--DSSVV 94 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~----~pl~~~~h~~~~pI~sI~F~~d~--l~Ss--dd~~I 94 (248)
..+..+.+.+.++.|+.+.... +.|+.+++... ....+...+ -.....|++.+.+ |.-+ ..+.|
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~-------~~I~~~~l~g~~~~~~~~~vi~~~-l~~P~GLAvD~~~~~LY~tD~~~~~I 495 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQ-------RMICSTQLDRAHGVSSYDTVISRD-IQAPDGLAVDWIHSNIYWTDSVLGTV 495 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTT-------TEEEEEEC--------CEEEECSS-CSCCCEEEEETTTTEEEEEETTTTEE
T ss_pred CceEEEeecccCCeeEEeeccc-------eeEEEEeccCCCCCcceeEEEecC-CCCcceeeeeecCCcEEEEecCCCeE
Confidence 5678888888778877665543 37888898753 222222212 1345688888654 4444 46789
Q ss_pred EEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC--CeEEEEEc
Q psy2083 95 KIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN--KKILTYYI 142 (248)
Q Consensus 95 KIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed--~~I~~w~I 142 (248)
.+.|.+ |+...++-.......+.|++.|..+.|+.+... .+|...++
T Consensus 496 ~v~~ld-G~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~ 544 (791)
T 3m0c_C 496 SVADTK-GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 544 (791)
T ss_dssp EEEETT-SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EEEeCC-CCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEec
Confidence 999987 444444432114578899999998888877643 56666554
No 299
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=87.81 E-value=20 Score=34.42 Aligned_cols=145 Identities=12% Similarity=0.017 Sum_probs=86.6
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC---CCeEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD---SSVVKIW 97 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd---d~~IKIW 97 (248)
.....+++.+.++.++.+.... +.|.+.|+............ ...-+.|+++|.. +.-+| ...|..-
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~-------~~I~v~~~dG~~~~~l~~~~-l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~ 155 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSET-------NRIEVSNLDGSLRKVLFWQE-LDQPRAIALDPSSGFMYWTDWGEVPKIERA 155 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTT-------TEEEEEETTSCSCEEEECSS-CSCCCCEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCcCeEEEEecCCEEEEEeCCC-------CEEEEEECCCCCEEEEEeCC-CCCCceEEEecCCCeEEEeccCCCCEEEEE
Confidence 4678899988888888776554 48999999865322222111 1235789999863 54444 3456555
Q ss_pred ECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeC-CCeEEEEEcCCCCCCCCccccccchhh-hhhccccccccCCce
Q psy2083 98 SKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANE-NKKILTYYIPSLGPAPKWCGFLDNLTE-ELEENIIENVYDDYK 175 (248)
Q Consensus 98 D~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~e-d~~I~~w~Ip~lG~aP~wcs~ld~~te-e~e~~~~~~~yd~y~ 175 (248)
+.+ |.....+-...-...|.+++.|+++.|+.+.. ..+|..+++- |. +...+.+ .+.+-..-++++|+-
T Consensus 156 ~~d-G~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~d--G~------~~~~~~~~~~~~P~gi~~~~~~l 226 (619)
T 3s94_A 156 GMD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD--GT------NRQAVVKGSLPHPFALTLFEDIL 226 (619)
T ss_dssp ETT-SCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSS--CC------EEC---------CCCEEESSSEE
T ss_pred ECC-CCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCC--CC------ccEEEEeCCCCCceEEEEeCCEE
Confidence 665 55444443211467899999998888887764 4667777653 32 2223333 344444557788999
Q ss_pred eecHhHHhh
Q psy2083 176 FVTRQELED 184 (248)
Q Consensus 176 fvt~~~l~~ 184 (248)
|+|.-.-..
T Consensus 227 y~td~~~~~ 235 (619)
T 3s94_A 227 YWTDWSTHS 235 (619)
T ss_dssp EEECTTTCS
T ss_pred EEecCCCCE
Confidence 999654433
No 300
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=87.42 E-value=5.8 Score=41.35 Aligned_cols=109 Identities=11% Similarity=0.157 Sum_probs=65.4
Q ss_pred cCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCceeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEE
Q psy2083 50 YIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNYVLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMF 129 (248)
Q Consensus 50 ~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~ 129 (248)
..|.|.+|++..++........-..+|.+|+=-...++.+-.+.|+|||....+.+. .+..+-..|..+.....+++|+
T Consensus 862 ~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~ig~~l~vy~l~~~~~L~-~~~~~~~~i~~~~l~~~~~~I~ 940 (1158)
T 3ei3_A 862 KQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKTKGDFIL 940 (1158)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEETTEEEEEEECTTSCEE-EEEEECCCSCEEEEEEETTEEE
T ss_pred CceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEcCCEEEEEECCCCceEE-EEeeccccEEEEEEeccCCEEE
Confidence 458999999976544333222224789998744445777777899999998766544 2220011232223333577888
Q ss_pred EEeCCCeEEEEEc-CCC--------CCCCCccccccchh
Q psy2083 130 IANENKKILTYYI-PSL--------GPAPKWCGFLDNLT 159 (248)
Q Consensus 130 sa~ed~~I~~w~I-p~l--------G~aP~wcs~ld~~t 159 (248)
+|.--.-|..+.. +.- -..|+|+.-.+-|.
T Consensus 941 vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld 979 (1158)
T 3ei3_A 941 VGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILD 979 (1158)
T ss_dssp EEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEE
T ss_pred EEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEc
Confidence 8887666655432 211 35799976665553
No 301
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=85.75 E-value=3 Score=40.82 Aligned_cols=140 Identities=14% Similarity=0.060 Sum_probs=77.9
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC---CCeEEEEECC
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD---SSVVKIWSKD 100 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd---d~~IKIWD~~ 100 (248)
..+++.+.++.|+.+.... +.|.++|+...........+ ...-+.|+++|.. |.-++ .+.|...+..
T Consensus 456 ~glavD~~~g~LY~tD~~~-------~~I~v~d~dg~~~~~l~~~~-~~~P~giavDp~~g~ly~td~~~~~~I~~~~~d 527 (699)
T 1n7d_A 456 DGLAVDWIHSNIYWTDSVL-------GTVSVADTKGVKRKTLFREQ-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 527 (699)
T ss_dssp CCEECCCSSSBCEECCTTT-------SCEEEEBSSSCCEEEECCCS-SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSS
T ss_pred ceEEEEeeCCcEEEEeccC-------CeEEEEecCCCceEEEEeCC-CCCcceEEEccCCCcEEEcccCCCCeEEEEeCC
Confidence 4555555566666553332 48999998765433222211 1234788998864 44443 2567776665
Q ss_pred CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEe-CCCeEEEEEcCCCCCCCCccccccchh---hhhhccccccccCCcee
Q psy2083 101 NGSLFTCIESGDQTQFNNLCHIPESGMMFIAN-ENKKILTYYIPSLGPAPKWCGFLDNLT---EELEENIIENVYDDYKF 176 (248)
Q Consensus 101 tGk~~~tie~~h~~~In~l~~~pdsgll~sa~-ed~~I~~w~Ip~lG~aP~wcs~ld~~t---ee~e~~~~~~~yd~y~f 176 (248)
|.....+-...-...|.|++.|+++.|+.+. ...+|..+++. |. ....+. ..+.....-+++.++-|
T Consensus 528 -G~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d--G~------~~~~~~~~~~~~~~P~glavd~~~ly 598 (699)
T 1n7d_A 528 -GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN--GG------NRKTILEDEKRLAHPFSLAVFEDKVF 598 (699)
T ss_dssp -SCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSS--SS------CCEEECCCSSSCSSCCCCEEETTEEE
T ss_pred -CCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccC--CC------ceEEEEecCCcCCCceEeEEECCEEE
Confidence 4433333211135678899999887777665 45688888753 21 111111 12222234466778888
Q ss_pred ecHhHH
Q psy2083 177 VTRQEL 182 (248)
Q Consensus 177 vt~~~l 182 (248)
+|...-
T Consensus 599 wtd~~~ 604 (699)
T 1n7d_A 599 WTDIIN 604 (699)
T ss_dssp EECSTT
T ss_pred EEeCCC
Confidence 886443
No 302
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=85.56 E-value=21 Score=33.49 Aligned_cols=98 Identities=9% Similarity=0.094 Sum_probs=65.9
Q ss_pred eeEEEEcCCCceeEEecCCC--CC-CeeEEEEcCCc--eeeeCCCeEEEEECCCCC------------EEEEeecC----
Q psy2083 53 AFYLYDIRADKPLRVKDHMY--GL-PIRDIKFHDNY--VLSMDSSVVKIWSKDNGS------------LFTCIESG---- 111 (248)
Q Consensus 53 ~V~LwDlRs~~pl~~~~h~~--~~-pI~sI~F~~d~--l~Ssdd~~IKIWD~~tGk------------~~~tie~~---- 111 (248)
.||.-++............+ .. .|..+..+|++ ++-..++.|.|-.+-.+. ...++.-+
T Consensus 42 ~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~ 121 (452)
T 3pbp_A 42 IIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEV 121 (452)
T ss_dssp EEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC-
T ss_pred EEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCccc
Confidence 79988988554444432221 23 68899999998 444677788887765321 01122210
Q ss_pred -CCCCeeEEEEeC---CCCEEEEEeCCCeEEEEEcCCCCCCCC
Q psy2083 112 -DQTQFNNLCHIP---ESGMMFIANENKKILTYYIPSLGPAPK 150 (248)
Q Consensus 112 -h~~~In~l~~~p---dsgll~sa~ed~~I~~w~Ip~lG~aP~ 150 (248)
.+.+|..+-|+| ++..|++-.+|++|++|++..--..|.
T Consensus 122 ~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~ 164 (452)
T 3pbp_A 122 GPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI 164 (452)
T ss_dssp -CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE
T ss_pred CCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc
Confidence 147899999999 457899999999999999986444553
No 303
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=85.55 E-value=22 Score=32.69 Aligned_cols=114 Identities=9% Similarity=0.111 Sum_probs=62.1
Q ss_pred CceeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce--eEEecCC-----CCCCeeEEEEcC
Q psy2083 11 GSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP--LRVKDHM-----YGLPIRDIKFHD 83 (248)
Q Consensus 11 G~~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p--l~~~~h~-----~~~pI~sI~F~~ 83 (248)
|-.+..+..+ -...+.++|.|++. ++++...+ |.|++++...++. +...... .......|+|+|
T Consensus 16 gf~~~~~a~~-l~~P~~~a~~pdG~-l~V~e~~g-------g~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~P 86 (454)
T 1cru_A 16 NFDKKVILSN-LNKPHALLWGPDNQ-IWLTERAT-------GKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHP 86 (454)
T ss_dssp TSCEEEEECC-CSSEEEEEECTTSC-EEEEETTT-------CEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECT
T ss_pred CeEEEEEECC-CCCceEEEEcCCCc-EEEEEcCC-------CEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECC
Confidence 3344555543 45678999999765 54544443 2688887665543 2222111 124567999999
Q ss_pred C----c---eeeeC------------CCeEEEEECCC--CC-----E-EEEeecCCCCCeeEEEEeCCCCEEEEEeC
Q psy2083 84 N----Y---VLSMD------------SSVVKIWSKDN--GS-----L-FTCIESGDQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 84 d----~---l~Ssd------------d~~IKIWD~~t--Gk-----~-~~tie~~h~~~In~l~~~pdsgll~sa~e 133 (248)
+ + ++.+. ...|--|+... ++ . +..+........+.++|.|||.+.++.++
T Consensus 87 df~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 87 DFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp TTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 5 3 33322 12333344332 11 1 11222211245789999999998887665
No 304
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=83.64 E-value=24 Score=31.63 Aligned_cols=108 Identities=9% Similarity=0.046 Sum_probs=70.9
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEE-ecC----CCC-CCeeEEEE---cCCc--eeeeC-
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRV-KDH----MYG-LPIRDIKF---HDNY--VLSMD- 90 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~-~~h----~~~-~pI~sI~F---~~d~--l~Ssd- 90 (248)
..--++.|.+.+|.+..++--. |+|..||...+.-..+ .+. +.+ ..+..|.| .+++ ++.++
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~-------g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~ 85 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYK-------GRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKN 85 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTT-------TEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEE
T ss_pred cCCcCccCcCCCCEEEEEeccC-------CEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcc
Confidence 3445677877778777766543 5999999975533222 222 111 13578999 5776 33244
Q ss_pred -------------CCeEEEEECC---CCCEEEEeecC------------CCCCeeEEEEeCCCCEEEEEeCC-CeE
Q psy2083 91 -------------SSVVKIWSKD---NGSLFTCIESG------------DQTQFNNLCHIPESGMMFIANEN-KKI 137 (248)
Q Consensus 91 -------------d~~IKIWD~~---tGk~~~tie~~------------h~~~In~l~~~pdsgll~sa~ed-~~I 137 (248)
++.|..+|.. +|+.+..+.-. -....|++++.++|+.-++++-. +.|
T Consensus 86 ~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I 161 (334)
T 2p9w_A 86 AKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAI 161 (334)
T ss_dssp TTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEE
T ss_pred cccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeE
Confidence 5778899999 88887665420 01358999999999988888776 553
No 305
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=83.31 E-value=18 Score=37.73 Aligned_cols=91 Identities=12% Similarity=0.039 Sum_probs=62.5
Q ss_pred eeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc-eeeeCCCeEEEEECCCCCE--EEEeecCCCCCeeEEEEeCC-----
Q psy2083 53 AFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY-VLSMDSSVVKIWSKDNGSL--FTCIESGDQTQFNNLCHIPE----- 124 (248)
Q Consensus 53 ~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~-l~Ssdd~~IKIWD~~tGk~--~~tie~~h~~~In~l~~~pd----- 124 (248)
.|++.|...++.+.......+..|...+.+... ++++ .+.+-+++.++|+. +...+- +.+|.|+++.|-
T Consensus 493 ~Irli~~~~~~~~~~w~~p~~~~I~~As~n~~~vvva~-g~~l~~fel~~~~L~~~~~~~l--~~evscl~i~~~~~~~~ 569 (1158)
T 3ei3_A 493 SVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV-GRALYYLQIHPQELRQISHTEM--EHEVACLDITPLGDSNG 569 (1158)
T ss_dssp CEEEEESSSCCEEEEECCTTCCCCCEEEECSSEEEEEE-TTEEEEEEEETTEEEEEEEEEC--SSCEEEEECCCCSSSTT
T ss_pred EEEEEECCCCeEEEEEECCCCCEEEEEEeCCCEEEEEE-CCEEEEEEeeCCceeeecccCC--CCceEEEEeecCCCCcc
Confidence 478888766555544433334678888877766 4443 56666777776642 334444 578999998763
Q ss_pred -CCEEEEEeC-CCeEEEEEcCCCC
Q psy2083 125 -SGMMFIANE-NKKILTYYIPSLG 146 (248)
Q Consensus 125 -sgll~sa~e-d~~I~~w~Ip~lG 146 (248)
+..+++|.. |++|+++.+|.|.
T Consensus 570 ~s~~~aVg~~~d~tv~I~sL~~l~ 593 (1158)
T 3ei3_A 570 LSPLCAIGLWTDISARILKLPSFE 593 (1158)
T ss_dssp CCSEEEEEETTTTEEEEEETTTCC
T ss_pred cccEEEEEECCCCEEEEEECCCCC
Confidence 479999996 9999999998753
No 306
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.89 E-value=7.7 Score=39.44 Aligned_cols=39 Identities=3% Similarity=0.168 Sum_probs=32.7
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD 69 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~ 69 (248)
..+++++..++...+++.+-|. ++|+|++.+++.+.+.+
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~--------~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDY--------KLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTC--------EEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCC--------EEEEEECCCCCeEeeec
Confidence 3567788888888888999886 89999999999888765
No 307
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=82.63 E-value=3.7 Score=39.29 Aligned_cols=75 Identities=11% Similarity=0.073 Sum_probs=42.8
Q ss_pred eEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc---eeee-CC-----CeEEE
Q psy2083 26 NNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY---VLSM-DS-----SVVKI 96 (248)
Q Consensus 26 ~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~---l~Ss-dd-----~~IKI 96 (248)
.++++..++.+++.+|.++ +.+.+||..+.+......-.....-.++...+++ ++++ .+ ..+.+
T Consensus 246 ~~~~~~~~g~lyv~GG~~~-------~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~ 318 (656)
T 1k3i_A 246 PGISMDGNGQIVVTGGNDA-------KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEV 318 (656)
T ss_dssp CEEEECTTSCEEEECSSST-------TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEE
T ss_pred ccccCCCCCCEEEeCCCCC-------CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceE
Confidence 3456666555555555443 3899999998754333211111111345566554 5555 33 57999
Q ss_pred EECCCCCEEEEe
Q psy2083 97 WSKDNGSLFTCI 108 (248)
Q Consensus 97 WD~~tGk~~~ti 108 (248)
||..+++ ...+
T Consensus 319 yd~~t~~-W~~~ 329 (656)
T 1k3i_A 319 YSPSSKT-WTSL 329 (656)
T ss_dssp EETTTTE-EEEE
T ss_pred eCCCCCc-ceeC
Confidence 9998765 4444
No 308
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=81.80 E-value=28 Score=33.66 Aligned_cols=107 Identities=9% Similarity=0.025 Sum_probs=61.0
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec-CCCCCCeeEEEEcCCc--eeeeCCCeEEEEEC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD-HMYGLPIRDIKFHDNY--VLSMDSSVVKIWSK 99 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~-h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~ 99 (248)
..|.+++..+ .|.+..+...+ -+..||.++++...... ......|.+|...+++ .+++. +-|-.+|.
T Consensus 407 ~~v~~i~~d~-~g~lWigt~~~--------Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~ 476 (781)
T 3v9f_A 407 NSVLCSLKDS-EGNLWFGTYLG--------NISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDL 476 (781)
T ss_dssp SBEEEEEECT-TSCEEEEETTE--------EEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEES
T ss_pred cceEEEEECC-CCCEEEEeccC--------CEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeC
Confidence 3455555444 34455554433 58889988765322211 1123578999988877 34445 56778999
Q ss_pred CCCCEEEEeecC----CCCCeeEEEEeCCCCEEEEEeCCCeEEEE
Q psy2083 100 DNGSLFTCIESG----DQTQFNNLCHIPESGMMFIANENKKILTY 140 (248)
Q Consensus 100 ~tGk~~~tie~~----h~~~In~l~~~pdsgll~sa~ed~~I~~w 140 (248)
.+++...-.... ....|++++..++|.+.+ |+.++-+..|
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~ 520 (781)
T 3v9f_A 477 ASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIY 520 (781)
T ss_dssp SSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEE
T ss_pred CCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEE
Confidence 887654332220 025788998888777554 5543224334
No 309
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=81.57 E-value=29 Score=31.03 Aligned_cols=112 Identities=12% Similarity=0.129 Sum_probs=62.2
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCce--eEEec---CCCCCCeeEEEEcCC---
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKP--LRVKD---HMYGLPIRDIKFHDN--- 84 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~p--l~~~~---h~~~~pI~sI~F~~d--- 84 (248)
.+..+..+ -..-..++|.|++. ++.+.... |.|++++...++. +.... ..-......|+|+|+
T Consensus 23 ~~~~va~g-L~~P~~ia~~pdG~-llVter~~-------G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~ 93 (347)
T 3das_A 23 VLRTVATG-LNSPWGLAPLPGGD-LLVSSRDE-------ATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYAS 93 (347)
T ss_dssp EEEEEECC-CSSEEEEEECTTSC-EEEEETTT-------CEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHH
T ss_pred eeEEeecC-CCCceEEEEcCCCc-EEEEEecC-------CEEEEEECCCCcEeeecccCceeecCCCCceeeEecccccc
Confidence 44445554 46678999999765 55554422 4899988766543 22211 111245789999996
Q ss_pred -c-e-ee---eCCCeEEEEECCCC----------C-EEEEeecCCCCCeeEEEEeCCCCEEEEEeC
Q psy2083 85 -Y-V-LS---MDSSVVKIWSKDNG----------S-LFTCIESGDQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 85 -~-l-~S---sdd~~IKIWD~~tG----------k-~~~tie~~h~~~In~l~~~pdsgll~sa~e 133 (248)
+ | ++ ..+..|--|....+ + .+..+.......-+.++|.|||.+.++.++
T Consensus 94 ~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 94 DHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp HCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred CCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence 2 2 22 12333333444431 1 122232211234567999999988887654
No 310
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=81.27 E-value=19 Score=35.10 Aligned_cols=80 Identities=13% Similarity=0.129 Sum_probs=52.1
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC-----------ceeEEecCCCCCCeeEEEE
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD-----------KPLRVKDHMYGLPIRDIKF 81 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-----------~pl~~~~h~~~~pI~sI~F 81 (248)
...++.-. .....+...||+.+++++|--+ .+|.++|++.- +-.....-.-|+.-.-.+|
T Consensus 315 ~~~~iP~p--ksPHGv~vsPDGkyi~v~GKLs-------ptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~F 385 (638)
T 3sbq_A 315 FTRYVPVP--KNPHGCNTSSDGKYFIAAGKLS-------PTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTF 385 (638)
T ss_dssp SEEEEEES--SSCCCEEECTTSCEEEEECTTS-------SBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEE
T ss_pred eEEEEeCC--CCCcceeeCCCCCEEEEcCCCC-------CeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEE
Confidence 44455543 3445788899888877776654 59999999841 1112222223466678899
Q ss_pred cCCc-eeee--CCCeEEEEECCC
Q psy2083 82 HDNY-VLSM--DSSVVKIWSKDN 101 (248)
Q Consensus 82 ~~d~-l~Ss--dd~~IKIWD~~t 101 (248)
.+++ +.++ -|.+|--|++.+
T Consensus 386 d~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 386 DGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp CSSSEEEEEETTTTEEEEEEHHH
T ss_pred CCCCceEeeeeecceEEEEeccH
Confidence 9998 4443 577788899875
No 311
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=80.46 E-value=42 Score=32.21 Aligned_cols=109 Identities=10% Similarity=-0.010 Sum_probs=71.0
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeee--CCCeEEEEE
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSM--DSSVVKIWS 98 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ss--dd~~IKIWD 98 (248)
..+..+.|.+.++.++.+.... +.|..+++..+....+...+- .....|++.+.. |.-+ ..+.|.+-|
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~-------~~I~r~~~~g~~~~~v~~~g~-~~P~GlAvD~~~~~LY~tD~~~~~I~v~~ 108 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISL-------KTISRAFMNGSALEHVVEFGL-DYPEGMAVDWLGKNLYWADTGTNRIEVSK 108 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTT-------TEEEEEETTSCSCEEEECSSC-SCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CceEEEEEECCCCEEEEEECCC-------CeEEEEECCCCCcEEEEeCCC-CCcceEEEEeCCCEEEEEECCCCEEEEEe
Confidence 4677899999888888775554 489999987654433332221 235688887653 4444 467888888
Q ss_pred CCCCCEEEEee-cCCCCCeeEEEEeCCCCEEEEEeC--CCeEEEEE
Q psy2083 99 KDNGSLFTCIE-SGDQTQFNNLCHIPESGMMFIANE--NKKILTYY 141 (248)
Q Consensus 99 ~~tGk~~~tie-~~h~~~In~l~~~pdsgll~sa~e--d~~I~~w~ 141 (248)
.+ |+....+- . .-...+++++.|..|.|+.+.. .++|...+
T Consensus 109 ~d-G~~~~~l~~~-~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~ 152 (628)
T 4a0p_A 109 LD-GQHRQVLVWK-DLDSPRALALDPAEGFMYWTEWGGKPKIDRAA 152 (628)
T ss_dssp TT-STTCEEEECS-SCCCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred cC-CCcEEEEEeC-CCCCcccEEEccCCCeEEEeCCCCCCEEEEEe
Confidence 87 44333333 3 1467789999998878877763 35555544
No 312
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=79.10 E-value=7.1 Score=37.94 Aligned_cols=59 Identities=8% Similarity=0.143 Sum_probs=42.0
Q ss_pred eeEEEEcCCc--eeeeCC-------------CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC
Q psy2083 76 IRDIKFHDNY--VLSMDS-------------SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN 134 (248)
Q Consensus 76 I~sI~F~~d~--l~Ssdd-------------~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed 134 (248)
-..|.|++++ .++.|. ..|-..|..+|+...-+..-....+|.+||+||+..|+++.+.
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEES
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeC
Confidence 3568999987 333442 1566678888887665553013689999999999999998754
No 313
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=77.16 E-value=54 Score=31.57 Aligned_cols=107 Identities=8% Similarity=0.077 Sum_probs=59.8
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEe-cC-----CCCCCeeEEEEcCCc--eeeeCCCeEE
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVK-DH-----MYGLPIRDIKFHDNY--VLSMDSSVVK 95 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~-~h-----~~~~pI~sI~F~~d~--l~Ssdd~~IK 95 (248)
.|.++...+ .|.+..+... -+.+||..+++..... .. .....|.+|...+++ .++++.+-|-
T Consensus 212 ~i~~i~~d~-~g~lwigt~~---------Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~ 281 (781)
T 3v9f_A 212 DVRCIYKDT-NGNIWIGTSK---------GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIM 281 (781)
T ss_dssp SEEEEEECT-TCCEEEEETT---------EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEEEESSSCEE
T ss_pred ceeEEEEcC-CCCEEEEeCC---------cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCCeE
Confidence 455554444 4445555444 3788998776432211 10 112569999988887 4555645677
Q ss_pred EEECCCCCEEEEee--------c---C--CCCCeeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy2083 96 IWSKDNGSLFTCIE--------S---G--DQTQFNNLCHIPESGMMFIANENKKILTYY 141 (248)
Q Consensus 96 IWD~~tGk~~~tie--------~---~--h~~~In~l~~~pdsgll~sa~ed~~I~~w~ 141 (248)
++|..+++...-.. + . ....|++++..++|. |.+|+.++-|..|+
T Consensus 282 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~ 339 (781)
T 3v9f_A 282 ILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFIS 339 (781)
T ss_dssp EEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEEC
T ss_pred EECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeC
Confidence 89998765322111 0 0 134688888888776 56677665565554
No 314
>3lcn_C MRNA transport factor GFD1; nuclear mRNA export, metal-binding, nucleus, RNA-binding, ZI finger, membrane, nuclear pore complex; 2.00A {Saccharomyces cerevisiae}
Probab=69.63 E-value=3.2 Score=23.74 Aligned_cols=14 Identities=36% Similarity=0.665 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHhh
Q psy2083 226 KKKKIRERIEQERT 239 (248)
Q Consensus 226 ~~~~~~~~~~~~~~ 239 (248)
+.+.+++||||+|+
T Consensus 7 Km~lLKKKIEEQr~ 20 (29)
T 3lcn_C 7 KMKLLKKKIEEQRE 20 (29)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 56778889999986
No 315
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=66.11 E-value=20 Score=34.65 Aligned_cols=58 Identities=9% Similarity=0.160 Sum_probs=40.0
Q ss_pred eEEEEcCCc--eeeeCC-------------CeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCC
Q psy2083 77 RDIKFHDNY--VLSMDS-------------SVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANEN 134 (248)
Q Consensus 77 ~sI~F~~d~--l~Ssdd-------------~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed 134 (248)
=.|.|++.+ +++-|. ..+-+.+..+|+...-+...-.++++.+||+||+..||+.-+.
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvniQH 551 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEES
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEEEC
Confidence 358899987 444342 2345567777886655543124799999999999999988543
No 316
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=65.75 E-value=21 Score=31.25 Aligned_cols=65 Identities=8% Similarity=0.227 Sum_probs=42.1
Q ss_pred eEEEEcCCc--eeeeCCCeEEEEECCCCCE--EEEee--cCCCCCeeEEEEeCC---CCEEEEEeCC------CeEEEEE
Q psy2083 77 RDIKFHDNY--VLSMDSSVVKIWSKDNGSL--FTCIE--SGDQTQFNNLCHIPE---SGMMFIANEN------KKILTYY 141 (248)
Q Consensus 77 ~sI~F~~d~--l~Ssdd~~IKIWD~~tGk~--~~tie--~~h~~~In~l~~~pd---sgll~sa~ed------~~I~~w~ 141 (248)
..++|.|++ +++...+.|.+++ +|+. +..+. .......+.++++|| ++.|+++... ..|..|.
T Consensus 34 ~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~ 111 (352)
T 2ism_A 34 WALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLR 111 (352)
T ss_dssp EEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEE
T ss_pred eEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEE
Confidence 589999998 4444468899998 4542 22221 101356889999998 6666666542 5677766
Q ss_pred cC
Q psy2083 142 IP 143 (248)
Q Consensus 142 Ip 143 (248)
..
T Consensus 112 ~~ 113 (352)
T 2ism_A 112 HL 113 (352)
T ss_dssp EC
T ss_pred eC
Confidence 54
No 317
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=64.93 E-value=71 Score=27.84 Aligned_cols=103 Identities=11% Similarity=0.049 Sum_probs=53.9
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCC--ceeEEec---CCCCCCeeEEEEcCC----c---eeeeC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRAD--KPLRVKD---HMYGLPIRDIKFHDN----Y---VLSMD 90 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~--~pl~~~~---h~~~~pI~sI~F~~d----~---l~Ssd 90 (248)
..-..++|.|++..++++... |.|+++|.... .++.... .........|+|+|+ + +..+.
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~--------G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~ 89 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRG--------GELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSE 89 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETT--------TEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCcEEEEEcCCCCEEEEEeCC--------ceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeC
Confidence 456789999976525555444 47888885321 1221110 111234689999996 3 33222
Q ss_pred -------CCeEEEEECCCC--C--EEEE-ee--c---CCCCCeeEEEEeCCCCEEEEEeC
Q psy2083 91 -------SSVVKIWSKDNG--S--LFTC-IE--S---GDQTQFNNLCHIPESGMMFIANE 133 (248)
Q Consensus 91 -------d~~IKIWD~~tG--k--~~~t-ie--~---~h~~~In~l~~~pdsgll~sa~e 133 (248)
...|--|+...+ + .... +. + ......+.++|.|||.+.++-++
T Consensus 90 ~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 90 VGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp ECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred CCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 124445555432 1 1111 11 1 00123568999999976666554
No 318
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=63.92 E-value=24 Score=31.11 Aligned_cols=67 Identities=10% Similarity=0.170 Sum_probs=42.4
Q ss_pred eeEEEEcCCc--eeeeCCCeEEEEECCCCC-EEEEee--cCCCCCeeEEEEeCC---CCEEEEEeC----C----CeEEE
Q psy2083 76 IRDIKFHDNY--VLSMDSSVVKIWSKDNGS-LFTCIE--SGDQTQFNNLCHIPE---SGMMFIANE----N----KKILT 139 (248)
Q Consensus 76 I~sI~F~~d~--l~Ssdd~~IKIWD~~tGk-~~~tie--~~h~~~In~l~~~pd---sgll~sa~e----d----~~I~~ 139 (248)
-..++|.|++ +++..++.|+++|. +|+ .+..+. .......+.++++|+ ++.|+++.. + ..|..
T Consensus 31 P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r 109 (354)
T 3a9g_A 31 PWSIAPLGGGRYLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIR 109 (354)
T ss_dssp EEEEEEEETTEEEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEE
T ss_pred CeEEEEcCCCeEEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEE
Confidence 4689999998 44444588888874 565 333221 101356889999998 666666653 2 56666
Q ss_pred EEcC
Q psy2083 140 YYIP 143 (248)
Q Consensus 140 w~Ip 143 (248)
|...
T Consensus 110 ~~~~ 113 (354)
T 3a9g_A 110 GRLD 113 (354)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 6543
No 319
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=62.26 E-value=16 Score=37.01 Aligned_cols=35 Identities=17% Similarity=0.223 Sum_probs=26.9
Q ss_pred CeeEEEEcCCc--eee-eCCCeEEEEECCCCCEEEEee
Q psy2083 75 PIRDIKFHDNY--VLS-MDSSVVKIWSKDNGSLFTCIE 109 (248)
Q Consensus 75 pI~sI~F~~d~--l~S-sdd~~IKIWD~~tGk~~~tie 109 (248)
.|.++...++. +.+ +-|+.+|||+..+|+++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 35566666664 444 789999999999999998864
No 320
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=60.13 E-value=94 Score=27.68 Aligned_cols=135 Identities=11% Similarity=0.123 Sum_probs=72.2
Q ss_pred eeEEEecCCCCCeeEEEEeCCCCcEEEeecC---ce-------eeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEc
Q psy2083 13 LFTCIESGDQTQFNNLCHIPESGMMFIANEN---KK-------ILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFH 82 (248)
Q Consensus 13 ~~~~~~~~~~~~V~~~~~~~~~g~l~~ag~d---~~-------~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~ 82 (248)
.+.++++..-...|++++.++++..++ +.- +. ..+...|.|.-||-.+-+.+ .+.- ..-|.|+|+
T Consensus 155 ~~~~~~g~~~~~pND~~v~~~G~fyvt-~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~--~~~l--~~pNGia~s 229 (355)
T 3sre_A 155 HLKTIRHKLLPSVNDIVAVGPEHFYAT-NDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVV--AEGF--DFANGINIS 229 (355)
T ss_dssp EEEEECCTTCSSEEEEEEEETTEEEEE-ESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEE--EEEE--SSEEEEEEC
T ss_pred EEeccccCCCCCCceEEEeCCCCEEec-CCcEeCCcccccchhhccCCccEEEEEECCeEEEe--ecCC--cccCcceEC
Confidence 444555443346789999987654333 221 00 00011246666665321221 1111 234899999
Q ss_pred CCc----eeeeCCCeEEEEECCC-CCE--EEEeecCCCCCeeEEEEeC-CCCEEEEEeCC-CeEEEEEcCCCCCCCCccc
Q psy2083 83 DNY----VLSMDSSVVKIWSKDN-GSL--FTCIESGDQTQFNNLCHIP-ESGMMFIANEN-KKILTYYIPSLGPAPKWCG 153 (248)
Q Consensus 83 ~d~----l~Ssdd~~IKIWD~~t-Gk~--~~tie~~h~~~In~l~~~p-dsgll~sa~ed-~~I~~w~Ip~lG~aP~wcs 153 (248)
||+ ++.+..+.|..||... |+. ...+.. ......+++.+ +|.+.+++.-+ .+|..| -|. .++|..--
T Consensus 230 pDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~--~g~PDGi~vD~e~G~lwva~~~~g~~v~~~-~P~-~~~~s~v~ 305 (355)
T 3sre_A 230 PDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSF--DTLVDNISVDPVTGDLWVGCHPNGMRIFFY-DAE-NPPGSEVL 305 (355)
T ss_dssp TTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEC--SSEEEEEEECTTTCCEEEEEESCHHHHHSC-CTT-SCCCEEEE
T ss_pred CCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeC--CCCCceEEEeCCCCcEEEEecCCceEEEEE-CCC-CCCCCEEE
Confidence 997 3445678898998763 442 223433 45567799999 58877766534 455444 243 24454433
Q ss_pred ccc
Q psy2083 154 FLD 156 (248)
Q Consensus 154 ~ld 156 (248)
...
T Consensus 306 rI~ 308 (355)
T 3sre_A 306 RIQ 308 (355)
T ss_dssp EEE
T ss_pred EEE
Confidence 333
No 321
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=58.88 E-value=9.8 Score=39.28 Aligned_cols=39 Identities=3% Similarity=0.168 Sum_probs=31.7
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEec
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKD 69 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~ 69 (248)
..+++++..++...+++.+-|. ++|+||+++++.+.+.+
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~--------~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDY--------KLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTC--------EEEEEETTTTEEEEEEE
T ss_pred ceeEEeeccCCccEEEEEeCCC--------EEEEEECCCCCeEEeec
Confidence 4567777777777888888886 89999999999888765
No 322
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=57.45 E-value=54 Score=24.02 Aligned_cols=49 Identities=4% Similarity=-0.122 Sum_probs=24.9
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCC
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDN 101 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~t 101 (248)
|.+-|||-..+.+++.........-..+.+..++ ++-..++.+ +|...+
T Consensus 34 GNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~~~~-iW~S~t 84 (113)
T 3mez_B 34 CNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDRLNT-VFVSNT 84 (113)
T ss_dssp SCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTTSCE-EEECSC
T ss_pred CEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCCCCE-EEECCC
Confidence 4677777644566665432211122356677776 333223333 676543
No 323
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=54.55 E-value=23 Score=31.66 Aligned_cols=91 Identities=8% Similarity=0.049 Sum_probs=49.9
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEc---CC-c-e-ee-eCCCeEEEEECCCCCEEEEeecC---CCCCeeE-E-
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFH---DN-Y-V-LS-MDSSVVKIWSKDNGSLFTCIESG---DQTQFNN-L- 119 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~---~d-~-l-~S-sdd~~IKIWD~~tGk~~~tie~~---h~~~In~-l- 119 (248)
|.|.-.|..+|+.++........|+....-. .+ . + +. ..|+.|-.+|.++|.....+... +.+++.. -
T Consensus 20 G~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~ 99 (339)
T 2be1_A 20 GGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTN 99 (339)
T ss_dssp SCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC
T ss_pred CeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCCC
Confidence 5888888888888887643311232221100 12 2 2 33 47888889999988655544420 0222321 0
Q ss_pred -EE-e----CCCCEEEEEeCCCeEEEEEc
Q psy2083 120 -CH-I----PESGMMFIANENKKILTYYI 142 (248)
Q Consensus 120 -~~-~----pdsgll~sa~ed~~I~~w~I 142 (248)
.+ . -.++.+++|+.++++...++
T Consensus 100 pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~ 128 (339)
T 2be1_A 100 IVVNDSGKIVEDEKVYTGSMRTIMYTINM 128 (339)
T ss_dssp ----------CCEEEEECEEEEEEEEEET
T ss_pred ceeecccccccCCEEEEEecCCEEEEEEC
Confidence 00 0 15677888888888765553
No 324
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=49.16 E-value=26 Score=34.88 Aligned_cols=38 Identities=8% Similarity=0.093 Sum_probs=30.1
Q ss_pred CeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecC
Q psy2083 24 QFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDH 70 (248)
Q Consensus 24 ~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h 70 (248)
.++++.-++ ...+++.+-|. ++|+||+++++++.+.+-
T Consensus 222 ~~Is~~~~~-~~fLftL~~Dh--------~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFH-ERYLIVLTQNC--------HLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEET-TTEEEEEETTC--------EEEEEETTTTEEEEEEET
T ss_pred ceEEEeccC-CcEEEEEEcCC--------eEEEEEcCCCceEEeecc
Confidence 466665555 56788888887 899999999998888764
No 325
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=47.95 E-value=25 Score=34.98 Aligned_cols=38 Identities=21% Similarity=0.356 Sum_probs=27.8
Q ss_pred CCCeeEEEEcCCceee-eCCCeEEEEECCCCCEEEEeec
Q psy2083 73 GLPIRDIKFHDNYVLS-MDSSVVKIWSKDNGSLFTCIES 110 (248)
Q Consensus 73 ~~pI~sI~F~~d~l~S-sdd~~IKIWD~~tGk~~~tie~ 110 (248)
+..|.++.+...-+.+ +-|+.+||||.++|+++.+..-
T Consensus 221 ~~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 221 DSVISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CCEEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred CceEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3446666665333444 7899999999999999888754
No 326
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=47.60 E-value=89 Score=27.77 Aligned_cols=67 Identities=7% Similarity=0.130 Sum_probs=42.4
Q ss_pred eeEEEEcCCc--eeeeC-CCeEEEEECCCCCE--EEEee---cCCCCCeeEEEEeCC---CCEEEEE-e--CCCeEEEEE
Q psy2083 76 IRDIKFHDNY--VLSMD-SSVVKIWSKDNGSL--FTCIE---SGDQTQFNNLCHIPE---SGMMFIA-N--ENKKILTYY 141 (248)
Q Consensus 76 I~sI~F~~d~--l~Ssd-d~~IKIWD~~tGk~--~~tie---~~h~~~In~l~~~pd---sgll~sa-~--ed~~I~~w~ 141 (248)
-..|+|.|++ +++.- .+.|++++..+|+. +..+. .........++++|| ++.|.+. + .+.+|.-|.
T Consensus 34 P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~ 113 (347)
T 3das_A 34 PWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRML 113 (347)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEE
T ss_pred ceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEE
Confidence 3689999998 44443 78899998877764 22221 101456889999996 5656553 2 345565554
Q ss_pred c
Q psy2083 142 I 142 (248)
Q Consensus 142 I 142 (248)
.
T Consensus 114 ~ 114 (347)
T 3das_A 114 Y 114 (347)
T ss_dssp B
T ss_pred e
Confidence 4
No 327
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=44.31 E-value=1.7e+02 Score=25.89 Aligned_cols=58 Identities=7% Similarity=-0.004 Sum_probs=32.3
Q ss_pred eeeeCCCeEEEEECCCCCEEE-EeecCCCCCee---EEE-----------EeC---------CCCEEEE-EeCCCeEEEE
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFT-CIESGDQTQFN---NLC-----------HIP---------ESGMMFI-ANENKKILTY 140 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~-tie~~h~~~In---~l~-----------~~p---------dsgll~s-a~ed~~I~~w 140 (248)
++++.|+.|.-.|..+|+.+- +.+. .+++. ++. -.| .++.++. -.+++++..+
T Consensus 216 ~~~~~dg~v~A~d~~~G~~~W~~~~l--~sPv~~~~dv~~~~~~g~~v~~~~P~~~~~~~~~~~~~v~v~~t~~G~~~Al 293 (339)
T 2be1_A 216 IAPFRDKSLLASDLDFRIARWVSPTF--PGIIVGLFDVFNDLRTNENILVPHPFNPGDHESISSNKVYLDQTSNLSWFAL 293 (339)
T ss_dssp EEEETTTEEEEECSTTCCEEEECCCC--SSCEEEEEEEEEETTTTEEEEEECCCCC--------CCEEEEECTTCCEEEE
T ss_pred EEECCCCEEEEEECCCCcEEEEeecC--CCCeEEEEEEEEecCCCCEEEecCCCcccccccccCCeEEEEECCCCcEEEe
Confidence 556677777777777777664 3332 23322 111 122 2344555 5778998888
Q ss_pred EcCCC
Q psy2083 141 YIPSL 145 (248)
Q Consensus 141 ~Ip~l 145 (248)
..+.+
T Consensus 294 s~~~y 298 (339)
T 2be1_A 294 SSQNF 298 (339)
T ss_dssp ETTTC
T ss_pred cCCCC
Confidence 86554
No 328
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=42.90 E-value=30 Score=29.62 Aligned_cols=68 Identities=12% Similarity=0.073 Sum_probs=38.1
Q ss_pred CeeEEEEcCCc-eeeeCCCeEEEEECCCCCE------EEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 75 PIRDIKFHDNY-VLSMDSSVVKIWSKDNGSL------FTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 75 pI~sI~F~~d~-l~Ssdd~~IKIWD~~tGk~------~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.++.++|||++ |.+..++.+---+..++.. -+.|-..--.....+.|.|+|.+.++ + |++|.-++=|.
T Consensus 42 ~~~~laf~P~G~LYaV~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~-dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGVLNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-S-KDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEEETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-E-TTEEEEESCCC
T ss_pred cceeEEECCCccEEEEeCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-C-CCEEEEeCCCc
Confidence 67899999988 4443555433333333211 11121000112367899999988887 4 58777665443
No 329
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=37.96 E-value=1.1e+02 Score=27.96 Aligned_cols=56 Identities=11% Similarity=0.202 Sum_probs=35.3
Q ss_pred eEEEEcCCc--eeeeCC-CeEEEEECCCCCEE--EEeec-----CCCCCeeEEEEeCC---CCEEEEEe
Q psy2083 77 RDIKFHDNY--VLSMDS-SVVKIWSKDNGSLF--TCIES-----GDQTQFNNLCHIPE---SGMMFIAN 132 (248)
Q Consensus 77 ~sI~F~~d~--l~Ssdd-~~IKIWD~~tGk~~--~tie~-----~h~~~In~l~~~pd---sgll~sa~ 132 (248)
..++|.|++ +++... +.|.+++..+|+.. ..+.. +....+.+++|+|| ++.|.++.
T Consensus 30 ~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 30 HALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred eEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 589999998 444433 46888887667642 22221 01345679999996 66666554
No 330
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=33.12 E-value=32 Score=35.41 Aligned_cols=34 Identities=18% Similarity=0.228 Sum_probs=25.0
Q ss_pred eeEEEEcCCc--eee-eCCCeEEEEECCCCCEEEEee
Q psy2083 76 IRDIKFHDNY--VLS-MDSSVVKIWSKDNGSLFTCIE 109 (248)
Q Consensus 76 I~sI~F~~d~--l~S-sdd~~IKIWD~~tGk~~~tie 109 (248)
|.++...++. +.+ +-|+++||||..+|+++.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 3444555553 444 789999999999999988864
No 331
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=32.37 E-value=2.2e+02 Score=23.80 Aligned_cols=76 Identities=13% Similarity=0.258 Sum_probs=48.7
Q ss_pred CCCeeEEEEc-CCc--eeeeCCCeEEEEECC-------CCCEEEEeecCCCCCeeEEEEe-CCCCEEEEEeCCCeEEEEE
Q psy2083 73 GLPIRDIKFH-DNY--VLSMDSSVVKIWSKD-------NGSLFTCIESGDQTQFNNLCHI-PESGMMFIANENKKILTYY 141 (248)
Q Consensus 73 ~~pI~sI~F~-~d~--l~Ssdd~~IKIWD~~-------tGk~~~tie~~h~~~In~l~~~-pdsgll~sa~ed~~I~~w~ 141 (248)
+..|.++... ++. ++.+..+.+|..... .|+...++.. ...+-.+... .++..|+..++++.+.-+.
T Consensus 83 ~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~--~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~ 160 (256)
T 1zvt_A 83 GATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPE--NAHVMPPVVIEDASDMLLAITQAGRMLMFP 160 (256)
T ss_dssp TCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCT--TCCBCCCEECCCTTCEEEEEETTSEEEEEE
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECC--CCEEEEEEEecCCCCEEEEEcCCCeEEEEE
Confidence 3567777442 333 667889999998864 2444445544 3455555565 3456788999999998887
Q ss_pred cCCCCCCCC
Q psy2083 142 IPSLGPAPK 150 (248)
Q Consensus 142 Ip~lG~aP~ 150 (248)
+..+-+-.|
T Consensus 161 ~~ei~~~gR 169 (256)
T 1zvt_A 161 VSDLPQLSK 169 (256)
T ss_dssp GGGSCBCSS
T ss_pred HHHCCCcCc
Confidence 655544444
No 332
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=32.03 E-value=2.1e+02 Score=23.36 Aligned_cols=89 Identities=6% Similarity=0.052 Sum_probs=45.8
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC-----CCeEEEEECCCCCEEEEeecCCCCC-eeEEEEeC
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD-----SSVVKIWSKDNGSLFTCIESGDQTQ-FNNLCHIP 123 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd-----d~~IKIWD~~tGk~~~tie~~h~~~-In~l~~~p 123 (248)
..+..||+.+.+............-.++....+. ++++. .+.+-++|.++++ ...+.+- +.+ ....+..-
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~-~~~r~~~~~~~~ 250 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNA-WRQVADM-NMCRRNAGVCAV 250 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTE-EEEECCC-SSCCBSCEEEEE
T ss_pred cEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCC-EeeCCCC-CCccccCeEEEE
Confidence 4689999998754433221101111223333343 55442 3468899998754 4444431 111 12222334
Q ss_pred CCCEEEEEeCCC-----eEEEEEc
Q psy2083 124 ESGMMFIANENK-----KILTYYI 142 (248)
Q Consensus 124 dsgll~sa~ed~-----~I~~w~I 142 (248)
++.+++.|+.++ .|..|++
T Consensus 251 ~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 251 NGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEET
T ss_pred CCEEEEECCcCCCcccccEEEEcC
Confidence 777878877553 3666664
No 333
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=29.70 E-value=3.7e+02 Score=25.47 Aligned_cols=105 Identities=12% Similarity=0.166 Sum_probs=54.9
Q ss_pred CCeeEEEEeCCCCcEEEeecCceeeeecCCeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECC
Q psy2083 23 TQFNNLCHIPESGMMFIANENKKILTYYIPAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKD 100 (248)
Q Consensus 23 ~~V~~~~~~~~~g~l~~ag~d~~~~~~~~G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~ 100 (248)
..|++++ -+..|.+-.+..++ +..||=.+-+............|.+|....++ -+++.+ -+-.+|..
T Consensus 22 n~V~~I~-qD~~G~lWigT~~G---------L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigT~~-Gl~~yd~~ 90 (758)
T 3ott_A 22 SVVSCFL-QDSEGLIWIGSNKG---------LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNTYLYMGTDN-GILVYNYR 90 (758)
T ss_dssp CCEEEEE-ECTTSCEEEEESSC---------EEEECSSCEEECSCTTSTTSSCEEEEEEETTTEEEEEETT-EEEEEETT
T ss_pred ceEEEEE-ECCCCCEEEEECCC---------ccccCCCceEEEEccCCCCCceEEEEEEcCCCcEEEEeCC-CeEEEeCC
Confidence 4555554 44466666665553 55566433111110011112468888877776 334454 46789998
Q ss_pred CCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEc
Q psy2083 101 NGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYI 142 (248)
Q Consensus 101 tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~I 142 (248)
+++... ........|++++. . .+.|.+|+.+ -+..|+.
T Consensus 91 ~~~f~~-~~~~~~~~i~~i~~-~-~g~lWigt~~-Gl~~~~~ 128 (758)
T 3ott_A 91 ADRYEQ-PETDFPTDVRTMAL-Q-GDTLWLGALN-GLYTYQL 128 (758)
T ss_dssp TTEECC-CSCCCCSCEEEEEE-E-TTEEEEEETT-EEEEEET
T ss_pred CCEEEC-cccCCCceEEEEEe-c-CCcEEEEcCC-cceeEeC
Confidence 765322 11101235777654 3 4567777766 4656653
No 334
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=28.45 E-value=3.4e+02 Score=24.76 Aligned_cols=105 Identities=13% Similarity=0.101 Sum_probs=58.4
Q ss_pred CCeeEEEEeCCCC-cEEEeecCceeeeecCCeeEEEEcCCC---ceeEEec----C----CCCCCeeEEEEcCC----c-
Q psy2083 23 TQFNNLCHIPESG-MMFIANENKKILTYYIPAFYLYDIRAD---KPLRVKD----H----MYGLPIRDIKFHDN----Y- 85 (248)
Q Consensus 23 ~~V~~~~~~~~~g-~l~~ag~d~~~~~~~~G~V~LwDlRs~---~pl~~~~----h----~~~~pI~sI~F~~d----~- 85 (248)
..-+.++|.|++. .++++... |.|+++|.... .++.... . ........|+|+|+ .
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~--------G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~ 85 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKE--------GYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGK 85 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETT--------TEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCE
T ss_pred CCceEEEECCCCCeEEEEEeCC--------ceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCE
Confidence 3457888888764 35555544 48999975422 2333211 1 01245789999997 2
Q ss_pred --eeee-C-C----------CeEEEEECCC----------CCEEEEee-cCCCCCeeEEEEeCCCCEEEEEeCCC
Q psy2083 86 --VLSM-D-S----------SVVKIWSKDN----------GSLFTCIE-SGDQTQFNNLCHIPESGMMFIANENK 135 (248)
Q Consensus 86 --l~Ss-d-d----------~~IKIWD~~t----------Gk~~~tie-~~h~~~In~l~~~pdsgll~sa~ed~ 135 (248)
|.-+ . + ..|--|.... .+.+..+. +........++|.|||.|.++.++.+
T Consensus 86 lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 86 LYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp EEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred EEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 3322 1 1 1222244432 12333343 11134567899999999888877654
No 335
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=28.33 E-value=3.9e+02 Score=25.31 Aligned_cols=80 Identities=8% Similarity=0.054 Sum_probs=42.3
Q ss_pred eEEEEcCCCceeEE-ecCCCCCCeeEEEEcCCc--eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEE
Q psy2083 54 FYLYDIRADKPLRV-KDHMYGLPIRDIKFHDNY--VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFI 130 (248)
Q Consensus 54 V~LwDlRs~~pl~~-~~h~~~~pI~sI~F~~d~--l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~s 130 (248)
+..||..+.+.... .+.-....|.+|... ++ -+++.++ |-.+|+++++.. .+... ...++..++....|.|+.
T Consensus 538 l~~~~~~~~~~~~~~~~gl~~~~i~~i~~~-~g~lWi~t~~G-l~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~G~l~f 613 (758)
T 3ott_A 538 VMRINPKDESQQSISFGSFSNNEILSMTCV-KNSIWVSTTNG-LWIIDRKTMDAR-QQNMT-NKRFTSLLFDPKEDCVYL 613 (758)
T ss_dssp EEEECC--CCCCBCCCCC---CCEEEEEEE-TTEEEEEESSC-EEEEETTTCCEE-EC--C-CCCCSEEEEETTTTEEEE
T ss_pred eEEEecCCCceEEecccCCCccceEEEEEC-CCCEEEECCCC-eEEEcCCCceeE-EecCC-CCceeeeEEECCCCcEEE
Confidence 67788776532211 111112347788775 44 4555666 456799877643 33220 345566666555666777
Q ss_pred EeCCCeE
Q psy2083 131 ANENKKI 137 (248)
Q Consensus 131 a~ed~~I 137 (248)
|+.+|-+
T Consensus 614 G~~~Gl~ 620 (758)
T 3ott_A 614 GGADGFG 620 (758)
T ss_dssp ECBSEEE
T ss_pred ecCCceE
Confidence 7777743
No 336
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=27.99 E-value=2.4e+02 Score=22.86 Aligned_cols=90 Identities=16% Similarity=0.053 Sum_probs=46.2
Q ss_pred CeeEEEEcCCCceeEEecCCCCCCeeEEEEcCCc--eeeeC-----CCeEEEEECCCCCEEEEeecCCCC-CeeEEEEeC
Q psy2083 52 PAFYLYDIRADKPLRVKDHMYGLPIRDIKFHDNY--VLSMD-----SSVVKIWSKDNGSLFTCIESGDQT-QFNNLCHIP 123 (248)
Q Consensus 52 G~V~LwDlRs~~pl~~~~h~~~~pI~sI~F~~d~--l~Ssd-----d~~IKIWD~~tGk~~~tie~~h~~-~In~l~~~p 123 (248)
..+..||+.+.+............-.++....+. ++++. ...|-+||.++++ ...+..- +. .....+..-
T Consensus 175 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~-p~~r~~~~~~~~ 252 (301)
T 2vpj_A 175 NSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDS-WTTVTSM-TTPRCYVGATVL 252 (301)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE-EEEECCC-SSCCBSCEEEEE
T ss_pred ceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCc-EEECCCC-CCcccceeEEEE
Confidence 4789999998865433221111111123333343 55442 3568899998764 4444320 11 112222333
Q ss_pred CCCEEEEEeCC-----CeEEEEEcC
Q psy2083 124 ESGMMFIANEN-----KKILTYYIP 143 (248)
Q Consensus 124 dsgll~sa~ed-----~~I~~w~Ip 143 (248)
++.+++.|+.+ ..|..|++.
T Consensus 253 ~~~i~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 253 RGRLYAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp TTEEEEECCBCSSSBEEEEEEEETT
T ss_pred CCEEEEEcCcCCCcccccEEEEcCC
Confidence 67777777755 346666643
No 337
>3zwl_E Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=26.64 E-value=53 Score=21.26 Aligned_cols=21 Identities=19% Similarity=0.501 Sum_probs=16.1
Q ss_pred hhHHHHHHHHHHHHHHHhhcCc
Q psy2083 221 EFEEFKKKKIRERIEQERTRGV 242 (248)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~r~ 242 (248)
.+..||. +++++|+++|+-|+
T Consensus 23 EW~awRa-~~~~~L~eer~~~~ 43 (50)
T 3zwl_E 23 QWTEYRE-KIGQEMEKSMNFKI 43 (50)
T ss_dssp HHHHHHH-HHHHHHHHHHCCCC
T ss_pred HHHHHHH-HHHHHHHHHHHHcC
Confidence 3566776 56789999999886
No 338
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=24.87 E-value=3.8e+02 Score=26.12 Aligned_cols=88 Identities=9% Similarity=-0.038 Sum_probs=56.8
Q ss_pred eeEEEEcCC----CceeEEe-cCCCCCCeeEEEEcCCc--eeee--CCCeEEEEECCC------CCE-------EEEeec
Q psy2083 53 AFYLYDIRA----DKPLRVK-DHMYGLPIRDIKFHDNY--VLSM--DSSVVKIWSKDN------GSL-------FTCIES 110 (248)
Q Consensus 53 ~V~LwDlRs----~~pl~~~-~h~~~~pI~sI~F~~d~--l~Ss--dd~~IKIWD~~t------Gk~-------~~tie~ 110 (248)
.|.+-|.|. +.++..+ .-. ..-..|.++||+ ++.+ -+.+|-+.|.++ ++. +..++.
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~p--ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~ 376 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVP--KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL 376 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEES--SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC
T ss_pred CeeEEccccccccCCceEEEEeCC--CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC
Confidence 467777776 3333221 101 122457889998 4444 477899999874 332 455555
Q ss_pred CCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcCC
Q psy2083 111 GDQTQFNNLCHIPESGMMFIANENKKILTYYIPS 144 (248)
Q Consensus 111 ~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip~ 144 (248)
.-.....+|.++|....+---|++|--|.|..
T Consensus 377 --GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 377 --GLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp --CSCEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred --CCcccEEEECCCCceEeeeeecceEEEEeccH
Confidence 34556789999996666666999999998754
No 339
>3h6r_A Clitocypin analog; cysteine proteinase inhibitor, kunitz inhibitor, beta trefoil; 1.95A {Clitocybe nebularis} PDB: 3h6r_B 3h6s_E
Probab=23.42 E-value=2.8e+02 Score=21.98 Aligned_cols=59 Identities=14% Similarity=0.136 Sum_probs=32.2
Q ss_pred eeeeCCCeEEEEECCCCCEEEEeecCCCCCeeEEEEeCCCCEEEEEeCCCeEEEEEcC--CCCCCCCcc
Q psy2083 86 VLSMDSSVVKIWSKDNGSLFTCIESGDQTQFNNLCHIPESGMMFIANENKKILTYYIP--SLGPAPKWC 152 (248)
Q Consensus 86 l~Ssdd~~IKIWD~~tGk~~~tie~~h~~~In~l~~~pdsgll~sa~ed~~I~~w~Ip--~lG~aP~wc 152 (248)
|.++.-.--+|-+..+|--..+|.+- ...| .....+..+++..|.+-.+| .-+++|.|-
T Consensus 88 V~t~~~~EW~I~~~~~~p~~~tI~~~-~~~v-------G~~~~~gtn~~~~V~~~~~~~i~~~~~P~Wq 148 (152)
T 3h6r_A 88 VIAGDPKEYILQLVPSTADVYIIRAP-IQRV-------GVDVEVGVQGNTLVYKFFPVDGSGGDRPAWR 148 (152)
T ss_dssp CEEESCCCBEEEECTTCSSEEEEECC-CSCT-------TEEEEEEEETTEEEEEEEECCSCCCCCEEEE
T ss_pred eEecceeEEEEEeCCCCCCcEEEcCC-cccc-------ceeEEEeeCCCcEEEEeCCCCCCCCCCCcee
Confidence 55555555566666665334455550 1111 22333444555677777777 447888994
No 340
>3aj1_A Cellulose synthase operon protein D; alpha and beta fold, octamer, tetramer of dimers, molecule R cellulose biosynthesis; 2.50A {Acetobacter xylinus} PDB: 3aj2_A 3a8e_A
Probab=20.83 E-value=24 Score=28.68 Aligned_cols=22 Identities=23% Similarity=0.475 Sum_probs=17.6
Q ss_pred CCCCCCCccccccchhhhhhcc
Q psy2083 144 SLGPAPKWCGFLDNLTEELEEN 165 (248)
Q Consensus 144 ~lG~aP~wcs~ld~~tee~e~~ 165 (248)
.+..-|.||.||..+.+|++..
T Consensus 14 ~~~~~P~~~~Fl~aLa~Ei~~~ 35 (167)
T 3aj1_A 14 IFEKKPDFTLFLQTLSWEIDDQ 35 (167)
T ss_dssp ---CCSCCHHHHHHHHHHHHHH
T ss_pred eeccCcchHHHHHHHHHHHHhc
Confidence 3567899999999999999975
No 341
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=20.71 E-value=4e+02 Score=22.81 Aligned_cols=110 Identities=8% Similarity=0.010 Sum_probs=54.7
Q ss_pred CCeeEEEEeCC---CCcEEEeecCceeeeecCCeeEEEEcCCC-------ceeEEe-cC--CCCCCeeEEEEcCCc---e
Q psy2083 23 TQFNNLCHIPE---SGMMFIANENKKILTYYIPAFYLYDIRAD-------KPLRVK-DH--MYGLPIRDIKFHDNY---V 86 (248)
Q Consensus 23 ~~V~~~~~~~~---~g~l~~ag~d~~~~~~~~G~V~LwDlRs~-------~pl~~~-~h--~~~~pI~sI~F~~d~---l 86 (248)
+....+++.|+ ++.++.+......-+.....|.-|++... +.+... .. .....-..|.|.||+ +
T Consensus 66 ~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv 145 (353)
T 2g8s_A 66 GGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFI 145 (353)
T ss_dssp CSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEE
T ss_pred CCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEE
Confidence 45688999986 77777664321000000125666776543 111111 10 011223689999998 3
Q ss_pred eeeCC-------------CeEEEEECCCCC-------------EEEEeecCCCCCeeEEEEeCCCCEEEEEeCC
Q psy2083 87 LSMDS-------------SVVKIWSKDNGS-------------LFTCIESGDQTQFNNLCHIPESGMMFIANEN 134 (248)
Q Consensus 87 ~Ssdd-------------~~IKIWD~~tGk-------------~~~tie~~h~~~In~l~~~pdsgll~sa~ed 134 (248)
..++. +.|--.|.+ |+ ....+..+ -...+.++|.|+.+.|+++...
T Consensus 146 ~~Gd~~~~~~~q~~~~~~g~I~ri~~d-G~~p~~npf~~~~~~~~~i~a~G-~rnp~gl~~d~~~g~l~~~d~g 217 (353)
T 2g8s_A 146 ALGENNQRPTAQDLDKLQGKLVRLTDQ-GEIPDDNPFIKESGVRAEIWSYG-IRNPQGMAMNPWSNALWLNEHG 217 (353)
T ss_dssp EECCTTCGGGGGCTTSCTTEEEEEETT-SCCCTTCTTTTSTTSCTTEEEEC-CSEEEEEEEETTTTEEEEEEEC
T ss_pred EECCCCCCCccCCCCCCCeEEEEECCC-CCCCCCCCCcCCCCCCccEEEEc-CcCccceEEECCCCCEEEEecC
Confidence 33332 234344554 32 01111111 2457789999966667766544
Done!