BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2085
(358 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q802W4|NOL10_DANRE Nucleolar protein 10 OS=Danio rerio GN=nol10 PE=2 SV=1
Length = 722
Score = 209 bits (531), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/160 (65%), Positives = 127/160 (79%), Gaps = 3/160 (1%)
Query: 194 LGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAP+WC FLDNLTEELEEN +YDDYKFVTR++LE LGL HLIG+ LLRAYMHGFF
Sbjct: 344 LGPAPRWCSFLDNLTEELEENPESTIYDDYKFVTRKDLESLGLAHLIGSPLLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY K K++ PF +EE++K KIR++IE+ R + VQL KLPKVN+ELALKLM+E
Sbjct: 404 MDIRLYHKVKTMVNPFAYEEYRKDKIRQKIEESRAQRVQLKKLPKVNKELALKLMEEDT- 462
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPS 353
E ++KKKKK ++ NLL DDRF +FENPD+QV E S
Sbjct: 463 --ELTNKKKKKKANVAGNLLMDDRFKVMFENPDYQVDERS 500
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/71 (76%), Positives = 63/71 (88%)
Query: 31 DIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEV 90
DI+RRIELIQDFEMP V TS+R+S DGQY+L+ G YKPRVRCY+T LS+KFERC DS+V
Sbjct: 38 DIQRRIELIQDFEMPTVCTSIRVSRDGQYILAAGTYKPRVRCYDTYQLSLKFERCLDSDV 97
Query: 91 VTFEILSDDYS 101
VTF+ILSDDYS
Sbjct: 98 VTFDILSDDYS 108
>sp|Q7T0Q5|NOL10_XENLA Nucleolar protein 10 OS=Xenopus laevis GN=nol10 PE=2 SV=1
Length = 689
Score = 201 bits (511), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 99/156 (63%), Positives = 127/156 (81%), Gaps = 2/156 (1%)
Query: 194 LGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAP+WC FLDNLTEELEEN VYDDYKFVTR+EL++LGL HLIG+ +LRAYMHGFF
Sbjct: 344 LGPAPRWCSFLDNLTEELEENPENTVYDDYKFVTRKELDELGLSHLIGSPMLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY K K++ PF +EE+KK+KIR++IE+ R + VQ+ KLPKVN+ELALKL +++++
Sbjct: 404 MDIRLYHKVKAMVNPFAYEEYKKEKIRQKIEETRAQRVQIKKLPKVNKELALKLYEDEEE 463
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQV 349
++ +KKK+K N+L DDRF +FENPDFQV
Sbjct: 464 EKQLSKKKKKQKKM--PNILTDDRFKVMFENPDFQV 497
Score = 118 bits (295), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 63/71 (88%)
Query: 31 DIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEV 90
D+RRRIELIQDFEMP VST++++S DGQY+++ G YKPR+RCY+T LS+KFERC DSEV
Sbjct: 38 DVRRRIELIQDFEMPTVSTNIKVSRDGQYIMAAGTYKPRIRCYDTYQLSLKFERCLDSEV 97
Query: 91 VTFEILSDDYS 101
+ F+ILS+DYS
Sbjct: 98 IKFDILSEDYS 108
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 101 SSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTE 153
+S++N INP H L GT EG+VE WDPR + + G LDCA + ++ + + E
Sbjct: 176 ASQINVCDINPTHHLFAAGTTEGRVECWDPRTRSRVGLLDCALSSVTADMEVE 228
>sp|Q66H99|NOL10_RAT Nucleolar protein 10 OS=Rattus norvegicus GN=Nol10 PE=2 SV=1
Length = 688
Score = 191 bits (486), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 101/160 (63%), Positives = 127/160 (79%), Gaps = 3/160 (1%)
Query: 194 LGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAP+WC FLDNLTEELEEN VYDDYKFVT+++LE+LGL HLIG+ LRAYMHGFF
Sbjct: 344 LGPAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLTHLIGSPFLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY K K + PF +EE++K KIR++IE+ R + VQL KLPKVN+ELALKL++E+++
Sbjct: 404 MDIRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLKKLPKVNKELALKLIEEEEE 463
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPS 353
+++ +KK K L N+L DDRF +FENPDFQV E S
Sbjct: 464 KQKSTLKKKVKSL---PNILTDDRFKVMFENPDFQVDEDS 500
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 31 DIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEV 90
D+RRRIELIQDFEMP V T++++S DGQY+L+TG YKPRVRCY+T LS+KFERC DSEV
Sbjct: 38 DVRRRIELIQDFEMPTVCTTIKVSKDGQYILATGTYKPRVRCYDTYQLSLKFERCLDSEV 97
Query: 91 VTFEILSDDYS 101
VTFEILSDDYS
Sbjct: 98 VTFEILSDDYS 108
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 101 SSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCIS 147
++E N IN VH L GTIEG+VE WDPR++ + G LDCA N ++
Sbjct: 176 AAENNVCDINTVHGLFATGTIEGRVECWDPRVRKRVGVLDCALNSVT 222
>sp|Q5RJG1|NOL10_MOUSE Nucleolar protein 10 OS=Mus musculus GN=Nol10 PE=2 SV=1
Length = 687
Score = 191 bits (485), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 101/160 (63%), Positives = 127/160 (79%), Gaps = 3/160 (1%)
Query: 194 LGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAP+WC FLDNLTEELEEN VYDDYKFVT+++LE+LGL HLIG+ LRAYMHGFF
Sbjct: 344 LGPAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLTHLIGSPFLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY K K + PF +EE++K KIR++IE+ R + VQL KLPKVN+ELALKL++E+++
Sbjct: 404 MDIRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLKKLPKVNKELALKLIEEEEE 463
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPS 353
+++ +KK K L N+L DDRF +FENPDFQV E S
Sbjct: 464 KQKSTLKKKVKSL---PNILTDDRFKVMFENPDFQVDEES 500
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 31 DIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEV 90
D+RRRIELIQDFEMP V T++++S DGQY+L+TG YKPRVRCY+T LS+KFERC DSEV
Sbjct: 38 DVRRRIELIQDFEMPTVCTTIKVSKDGQYILATGTYKPRVRCYDTYQLSLKFERCLDSEV 97
Query: 91 VTFEILSDDYS 101
VTFEILSDDYS
Sbjct: 98 VTFEILSDDYS 108
>sp|Q9BSC4|NOL10_HUMAN Nucleolar protein 10 OS=Homo sapiens GN=NOL10 PE=1 SV=1
Length = 688
Score = 191 bits (485), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 101/160 (63%), Positives = 127/160 (79%), Gaps = 3/160 (1%)
Query: 194 LGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAP+WC FLDNLTEELEEN VYDDYKFVT+++LE+LGL HLIG+ LRAYMHGFF
Sbjct: 344 LGPAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLTHLIGSPFLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY K K + PF +EE++K KIR++IE+ R + VQL KLPKVN+ELALKL++E+++
Sbjct: 404 MDIRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLKKLPKVNKELALKLIEEEEE 463
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPS 353
+++ +KK K L N+L DDRF +FENPDFQV E S
Sbjct: 464 KQKSTWKKKVKSL---PNILTDDRFKVMFENPDFQVDEES 500
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 31 DIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEV 90
D+RRRIELIQDFEMP V T++++S DGQY+L+TG YKPRVRCY+T LS+KFERC DSEV
Sbjct: 38 DVRRRIELIQDFEMPTVCTTIKVSKDGQYILATGTYKPRVRCYDTYQLSLKFERCLDSEV 97
Query: 91 VTFEILSDDYS 101
VTFEILSDDYS
Sbjct: 98 VTFEILSDDYS 108
>sp|Q6NVM6|NOL10_XENTR Nucleolar protein 10 OS=Xenopus tropicalis GN=nol10 PE=2 SV=1
Length = 686
Score = 189 bits (479), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/156 (63%), Positives = 119/156 (76%), Gaps = 5/156 (3%)
Query: 194 LGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAP+WC FLDNLTEELEEN VYDDYKFVTR+EL++LGL HLIG+ LLRAYMHGFF
Sbjct: 344 LGPAPRWCSFLDNLTEELEENPESTVYDDYKFVTRKELDELGLSHLIGSPLLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY K K++ PF +EE+KK+KIR++IE+ R + VQ+ KLPKVN K + K
Sbjct: 404 MDIRLYHKVKAMVNPFAYEEYKKEKIRQKIEEARAQRVQIKKLPKVN-----KELALKLY 458
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQV 349
EE E +KKKK + N+L DDRF +FENPDFQV
Sbjct: 459 EEEEELSQKKKKQKKMPNILSDDRFKVMFENPDFQV 494
Score = 118 bits (295), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 63/71 (88%)
Query: 31 DIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEV 90
D+RRRIELIQDFEMP VST++++S DGQY+++ G YKPRVRCY+T LS+KFERC D+EV
Sbjct: 38 DVRRRIELIQDFEMPTVSTNIKVSRDGQYIMAAGTYKPRVRCYDTYQLSLKFERCLDAEV 97
Query: 91 VTFEILSDDYS 101
V F+ILS+DYS
Sbjct: 98 VKFDILSEDYS 108
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 101 SSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTE 153
+S++N INP H L GT EGKVE WDPR + + G LDCA + ++ + + E
Sbjct: 176 ASQINVCDINPAHHLFAAGTTEGKVECWDPRTRNRVGLLDCALSSVTADMEVE 228
>sp|O74879|NOL10_SCHPO Ribosome biogenesis protein enp2 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=enp2 PE=1 SV=1
Length = 634
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 111/159 (69%), Gaps = 6/159 (3%)
Query: 193 NLGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGF 252
+L PAP+WC FLDN+TEE+EEN +YDDYKFVT++EL +LGL HL+GT ++RAYMHGF
Sbjct: 355 SLNPAPRWCSFLDNITEEMEENPAPTIYDDYKFVTKKELLNLGLDHLVGTGVIRAYMHGF 414
Query: 253 FMDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLPKVNQELALKLMDEKQ 312
F+D LY KA+ ++ PF +EE ++K ++ER+E++R ++ PKVN LA +L ++
Sbjct: 415 FIDNNLYEKARLIANPFSYEEHRQKIVKERLEKQRASKIRSQNRPKVNAGLASRLSYQEN 474
Query: 313 KAEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIE 351
K +KK + ++LED+RF +F + +F+V E
Sbjct: 475 KL------RKKTGVTDGPSILEDERFKNVFTDKEFEVDE 507
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 53/74 (71%)
Query: 32 IRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVV 91
+ RIEL+QDFE P S ++ + DG+Y ++TG+YKP ++ ++ +S+KFER D+E V
Sbjct: 40 LSHRIELLQDFEYPEASNRIKCTRDGKYAMATGVYKPHIKVFDFAEMSLKFERHTDAENV 99
Query: 92 TFEILSDDYSSELN 105
FEILSDD++ ++
Sbjct: 100 QFEILSDDWTKSVH 113
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 98 DDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDC 141
D + +N I INP+HQL+ GT G VE WDPR + + G L+
Sbjct: 181 DSPTGGVNVIDINPMHQLLAFGTDAGSVEFWDPRDRSRVGILEI 224
>sp|P48234|NOL10_YEAST Ribosome biogenesis protein ENP2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ENP2 PE=1 SV=2
Length = 707
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 104/167 (62%), Gaps = 18/167 (10%)
Query: 194 LGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGP+P+WC FLD++TEELEE + VY +Y+F+TR +++ L L HL+G+ +LRAYMHGFF
Sbjct: 346 LGPSPRWCSFLDSITEELEEKPSDTVYSNYRFITRDDVKKLNLTHLVGSRVLRAYMHGFF 405
Query: 254 MDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQE-----RTRGVQLNKLPKVNQELALKLM 308
++ LY K ++ P +++ ++++IR RIE+E R+ G KVN+ L KL
Sbjct: 406 INTELYDKVSLIANPDAYKDEREREIRRRIEKERESRIRSSGAVQKPKIKVNKTLVDKL- 464
Query: 309 DEKQKAEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPSSD 355
+K+ +++ +L DDRF ++FE+ +FQV E D
Sbjct: 465 ------------SQKRGDKVAGKVLTDDRFKEMFEDEEFQVDEDDYD 499
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 51/71 (71%)
Query: 35 RIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFE 94
R+ELIQDFE S +++S DGQY ++TG YKP++ Y+ NLS+KF+R D+E V F
Sbjct: 46 RVELIQDFEFSEASNKIKVSRDGQYCMATGTYKPQIHVYDFANLSLKFDRHTDAENVDFT 105
Query: 95 ILSDDYSSELN 105
ILSDD++ ++
Sbjct: 106 ILSDDWTKSVH 116
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 104 LNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTL 139
+N ++IN V+ L+ GT VE WDPR + + L
Sbjct: 183 VNHVSINEVNGLLAAGTETNVVEFWDPRSRSRVSKL 218
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,217,898
Number of Sequences: 539616
Number of extensions: 5871364
Number of successful extensions: 104550
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 611
Number of HSP's that attempted gapping in prelim test: 68511
Number of HSP's gapped (non-prelim): 21531
length of query: 358
length of database: 191,569,459
effective HSP length: 119
effective length of query: 239
effective length of database: 127,355,155
effective search space: 30437882045
effective search space used: 30437882045
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)