Query psy2085
Match_columns 358
No_of_seqs 310 out of 1392
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 23:54:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2085.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2085hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h5i_A Guanine nucleotide-exch 99.8 2.2E-20 7.4E-25 181.0 17.8 125 46-188 134-343 (365)
2 2ynn_A Coatomer subunit beta'; 99.8 9.5E-19 3.2E-23 164.1 23.0 155 4-201 110-275 (304)
3 4gqb_B Methylosome protein 50; 99.8 9.6E-19 3.3E-23 168.9 23.3 160 5-192 95-293 (344)
4 3ow8_A WD repeat-containing pr 99.8 2.1E-18 7.3E-23 163.9 22.3 156 4-190 93-281 (321)
5 3ow8_A WD repeat-containing pr 99.8 3.5E-18 1.2E-22 162.4 22.8 158 4-190 49-239 (321)
6 3frx_A Guanine nucleotide-bind 99.8 1E-17 3.5E-22 158.4 22.7 171 4-189 78-318 (319)
7 1got_B GT-beta; complex (GTP-b 99.8 1.2E-17 4.2E-22 158.9 23.0 147 6-185 157-340 (340)
8 2ynn_A Coatomer subunit beta'; 99.8 4.1E-18 1.4E-22 159.7 19.0 136 36-190 3-174 (304)
9 4aow_A Guanine nucleotide-bind 99.8 2.9E-17 9.9E-22 152.7 24.6 177 4-190 52-339 (340)
10 1got_B GT-beta; complex (GTP-b 99.8 1.6E-17 5.4E-22 158.2 23.2 154 4-190 68-259 (340)
11 4gqb_B Methylosome protein 50; 99.8 8.2E-18 2.8E-22 162.3 21.1 155 4-189 140-332 (344)
12 1vyh_C Platelet-activating fac 99.8 1.4E-17 4.7E-22 163.3 22.6 154 4-190 163-371 (410)
13 3frx_A Guanine nucleotide-bind 99.8 3E-17 1E-21 155.1 23.7 163 4-190 31-229 (319)
14 4g56_B MGC81050 protein; prote 99.8 1.8E-17 6.2E-22 159.7 19.8 154 4-188 152-343 (357)
15 2pbi_B Guanine nucleotide-bind 99.8 2.2E-17 7.6E-22 158.7 20.1 139 4-185 211-354 (354)
16 3fm0_A Protein CIAO1; WDR39,SG 99.8 1.5E-17 5.3E-22 158.8 18.6 129 34-190 3-138 (345)
17 4g56_B MGC81050 protein; prote 99.8 3.6E-17 1.2E-21 157.6 21.2 161 6-192 108-305 (357)
18 1vyh_C Platelet-activating fac 99.8 1.9E-17 6.4E-22 162.3 19.2 142 4-190 121-267 (410)
19 2hes_X YDR267CP; beta-propelle 99.8 2.7E-17 9.2E-22 156.2 19.6 150 4-189 71-231 (330)
20 3lrv_A PRE-mRNA-splicing facto 99.8 3.1E-17 1.1E-21 155.8 19.9 123 38-190 116-246 (343)
21 3iz6_a 40S ribosomal protein R 99.8 2.6E-17 8.8E-22 159.3 19.6 147 4-189 219-376 (380)
22 2hes_X YDR267CP; beta-propelle 99.8 4.6E-17 1.6E-21 154.6 20.9 150 5-189 26-185 (330)
23 3fm0_A Protein CIAO1; WDR39,SG 99.8 2.8E-17 9.7E-22 156.9 19.2 148 4-190 29-183 (345)
24 4ggc_A P55CDC, cell division c 99.8 1.1E-16 3.8E-21 147.3 21.6 63 6-79 38-100 (318)
25 4ery_A WD repeat-containing pr 99.7 1.3E-16 4.5E-21 148.5 22.1 143 4-190 36-182 (312)
26 2xzm_R RACK1; ribosome, transl 99.7 4.1E-16 1.4E-20 148.3 25.4 108 4-131 40-148 (343)
27 3dm0_A Maltose-binding peripla 99.7 1.8E-16 6E-21 165.2 24.4 158 4-190 396-594 (694)
28 3f3f_A Nucleoporin SEH1; struc 99.7 1.8E-16 6.1E-21 145.7 20.8 183 3-190 71-339 (351)
29 1nr0_A Actin interacting prote 99.7 3.3E-17 1.1E-21 168.8 17.6 117 44-190 146-272 (611)
30 1nr0_A Actin interacting prote 99.7 1.7E-16 6E-21 163.4 22.7 129 43-190 57-223 (611)
31 2pm7_B Protein transport prote 99.7 9.3E-17 3.2E-21 150.0 18.7 146 4-189 68-239 (297)
32 1erj_A Transcriptional repress 99.7 2.6E-16 8.7E-21 152.9 21.5 142 4-190 136-289 (393)
33 2xzm_R RACK1; ribosome, transl 99.7 1.7E-16 6E-21 150.9 20.0 134 31-188 6-149 (343)
34 4e54_B DNA damage-binding prot 99.7 4.7E-17 1.6E-21 160.0 15.5 157 5-190 134-329 (435)
35 1erj_A Transcriptional repress 99.7 1.2E-16 4E-21 155.3 17.8 136 36-190 55-198 (393)
36 2ymu_A WD-40 repeat protein; u 99.7 2.1E-16 7.1E-21 158.6 20.0 135 4-185 439-577 (577)
37 2pbi_B Guanine nucleotide-bind 99.7 3.7E-16 1.3E-20 150.1 20.7 136 37-190 55-231 (354)
38 3vu4_A KMHSV2; beta-propeller 99.7 3.5E-16 1.2E-20 150.4 19.9 151 6-190 74-273 (355)
39 3zwl_B Eukaryotic translation 99.7 1.6E-15 5.3E-20 141.6 23.4 155 4-190 45-251 (369)
40 4gga_A P55CDC, cell division c 99.7 6.5E-16 2.2E-20 150.9 21.3 172 6-189 118-396 (420)
41 2aq5_A Coronin-1A; WD40 repeat 99.7 3.1E-16 1.1E-20 151.6 18.7 153 4-190 48-209 (402)
42 4ery_A WD repeat-containing pr 99.7 4.7E-16 1.6E-20 144.8 18.5 123 37-190 14-140 (312)
43 2pm7_B Protein transport prote 99.7 2.5E-16 8.5E-21 147.1 16.3 119 43-190 7-134 (297)
44 1gxr_A ESG1, transducin-like e 99.7 1.2E-15 4.2E-20 140.9 20.6 149 4-190 64-216 (337)
45 3iz6_a 40S ribosomal protein R 99.7 7.5E-16 2.6E-20 149.0 19.5 153 5-191 172-332 (380)
46 3ei3_B DNA damage-binding prot 99.7 2.1E-15 7.3E-20 144.0 21.3 158 4-190 87-284 (383)
47 2w18_A PALB2, fancn, partner a 99.7 8E-16 2.7E-20 150.6 18.5 144 4-186 194-355 (356)
48 2aq5_A Coronin-1A; WD40 repeat 99.7 1.5E-15 5.1E-20 146.8 20.1 151 4-190 95-256 (402)
49 3gre_A Serine/threonine-protei 99.7 7.6E-16 2.6E-20 149.7 18.1 159 4-190 77-247 (437)
50 3dwl_C Actin-related protein 2 99.7 3E-16 1E-20 149.1 14.8 155 4-190 24-238 (377)
51 3bg1_A Protein SEC13 homolog; 99.7 3.4E-16 1.1E-20 147.7 14.7 118 43-189 11-137 (316)
52 3k26_A Polycomb protein EED; W 99.7 2.5E-15 8.5E-20 140.4 20.4 145 5-190 36-194 (366)
53 3f3f_A Nucleoporin SEH1; struc 99.7 1.1E-15 3.9E-20 140.2 17.7 121 43-190 9-145 (351)
54 1sq9_A Antiviral protein SKI8; 99.7 2.3E-15 7.7E-20 143.4 20.3 153 5-190 199-397 (397)
55 1k8k_C P40, ARP2/3 complex 41 99.7 4.3E-15 1.5E-19 139.7 21.7 158 4-190 21-235 (372)
56 2ymu_A WD-40 repeat protein; u 99.7 8.1E-16 2.8E-20 154.3 17.8 115 43-190 14-131 (577)
57 4aez_A CDC20, WD repeat-contai 99.7 3.8E-15 1.3E-19 144.4 21.8 158 4-190 104-295 (401)
58 2j04_B YDR362CP, TAU91; beta p 99.7 1.7E-16 5.7E-21 162.7 12.5 142 5-189 279-429 (524)
59 3vl1_A 26S proteasome regulato 99.7 7.4E-15 2.5E-19 141.2 23.1 160 4-190 110-324 (420)
60 3vl1_A 26S proteasome regulato 99.7 7.7E-16 2.6E-20 148.1 16.2 143 4-190 69-214 (420)
61 2pm9_A Protein WEB1, protein t 99.7 2.4E-15 8.3E-20 143.8 19.3 146 4-190 179-339 (416)
62 3jrp_A Fusion protein of prote 99.7 3.6E-15 1.2E-19 140.0 20.0 148 3-190 69-242 (379)
63 3dm0_A Maltose-binding peripla 99.7 2.7E-15 9.1E-20 156.3 21.0 155 4-190 443-634 (694)
64 3lrv_A PRE-mRNA-splicing facto 99.7 1.1E-15 3.8E-20 145.1 16.0 149 3-190 139-294 (343)
65 3dw8_B Serine/threonine-protei 99.7 2.6E-15 8.7E-20 145.3 17.8 130 43-190 175-318 (447)
66 4a11_B DNA excision repair pro 99.7 5.9E-15 2E-19 139.9 19.9 173 5-190 158-367 (408)
67 3bg1_A Protein SEC13 homolog; 99.7 1.4E-15 4.6E-20 143.5 15.1 146 4-189 26-199 (316)
68 3mmy_A MRNA export factor; mRN 99.7 1.1E-14 3.8E-19 135.7 21.2 113 4-143 55-171 (368)
69 3odt_A Protein DOA1; ubiquitin 99.6 9E-15 3.1E-19 133.9 19.9 139 4-190 156-298 (313)
70 4aez_A CDC20, WD repeat-contai 99.6 9.2E-15 3.1E-19 141.7 21.0 134 43-190 215-382 (401)
71 4a11_B DNA excision repair pro 99.6 6.9E-15 2.4E-19 139.4 19.2 177 4-190 57-278 (408)
72 2vdu_B TRNA (guanine-N(7)-)-me 99.6 6.1E-15 2.1E-19 145.3 19.3 147 6-190 118-273 (450)
73 2j04_A TAU60, YPL007P, hypothe 99.6 1.4E-15 4.8E-20 157.3 15.2 117 44-190 84-213 (588)
74 2oaj_A Protein SNI1; WD40 repe 99.6 2.1E-15 7.3E-20 163.4 17.3 169 5-190 71-244 (902)
75 3jrp_A Fusion protein of prote 99.6 1.6E-14 5.6E-19 135.5 20.4 147 4-190 24-193 (379)
76 1sq9_A Antiviral protein SKI8; 99.6 9.7E-15 3.3E-19 139.0 18.6 153 4-190 138-324 (397)
77 3i2n_A WD repeat-containing pr 99.6 9.8E-15 3.3E-19 136.2 18.2 147 4-189 181-354 (357)
78 3mmy_A MRNA export factor; mRN 99.6 4E-15 1.4E-19 138.8 15.5 126 35-190 28-162 (368)
79 2xyi_A Probable histone-bindin 99.6 1.2E-14 4.2E-19 142.7 19.8 150 5-188 196-353 (430)
80 3dw8_B Serine/threonine-protei 99.6 8.2E-15 2.8E-19 141.8 18.2 161 4-191 190-376 (447)
81 1k8k_C P40, ARP2/3 complex 41 99.6 1.3E-14 4.4E-19 136.4 18.9 153 4-188 109-274 (372)
82 3ei3_B DNA damage-binding prot 99.6 1.3E-14 4.6E-19 138.5 19.1 135 35-189 62-237 (383)
83 2pm9_A Protein WEB1, protein t 99.6 1.7E-15 5.8E-20 144.9 12.9 141 10-190 42-199 (416)
84 1gxr_A ESG1, transducin-like e 99.6 3.6E-14 1.2E-18 130.9 21.0 137 4-186 196-335 (337)
85 3zwl_B Eukaryotic translation 99.6 3.9E-14 1.3E-18 132.1 21.3 170 5-190 129-348 (369)
86 3k26_A Polycomb protein EED; W 99.6 3E-14 1E-18 133.0 20.2 107 4-134 86-194 (366)
87 3v7d_B Cell division control p 99.6 4.4E-14 1.5E-18 138.3 22.2 159 4-190 133-343 (464)
88 1pgu_A Actin interacting prote 99.6 6.8E-15 2.3E-19 147.6 16.6 143 4-189 457-615 (615)
89 4gq1_A NUP37; propeller, trans 99.6 4.8E-15 1.6E-19 144.3 15.1 165 4-190 102-288 (393)
90 1r5m_A SIR4-interacting protei 99.6 8.7E-15 3E-19 139.2 16.4 136 33-190 33-182 (425)
91 3dwl_C Actin-related protein 2 99.6 5.4E-15 1.9E-19 140.4 14.8 154 4-188 113-281 (377)
92 2j04_B YDR362CP, TAU91; beta p 99.6 6.7E-15 2.3E-19 150.8 16.5 154 4-190 226-388 (524)
93 2oit_A Nucleoporin 214KDA; NH2 99.6 3.2E-15 1.1E-19 149.0 13.5 130 41-190 88-224 (434)
94 1r5m_A SIR4-interacting protei 99.6 2.9E-14 9.9E-19 135.6 19.5 154 4-190 121-321 (425)
95 3i2n_A WD repeat-containing pr 99.6 9.3E-15 3.2E-19 136.3 15.5 119 43-190 16-150 (357)
96 3mkq_A Coatomer beta'-subunit; 99.6 1.1E-14 3.9E-19 152.0 17.8 138 35-190 2-174 (814)
97 4e54_B DNA damage-binding prot 99.6 1.1E-14 3.6E-19 143.2 16.4 122 43-190 117-242 (435)
98 3sfz_A APAF-1, apoptotic pepti 99.6 2.7E-14 9.3E-19 156.8 21.3 143 4-190 628-776 (1249)
99 1yfq_A Cell cycle arrest prote 99.6 1.4E-14 4.6E-19 135.0 16.2 157 4-190 113-284 (342)
100 3gre_A Serine/threonine-protei 99.6 2.4E-14 8.1E-19 139.1 18.4 153 4-190 124-294 (437)
101 4aow_A Guanine nucleotide-bind 99.6 5.3E-14 1.8E-18 130.5 19.4 132 34-190 26-161 (340)
102 3mkq_A Coatomer beta'-subunit; 99.6 5.5E-14 1.9E-18 146.8 21.7 154 4-190 68-261 (814)
103 4ggc_A P55CDC, cell division c 99.6 2.4E-14 8.2E-19 131.6 16.5 129 48-190 28-183 (318)
104 2j04_A TAU60, YPL007P, hypothe 99.6 2.9E-14 9.8E-19 147.6 18.7 143 6-190 100-256 (588)
105 3v7d_B Cell division control p 99.6 1E-13 3.5E-18 135.7 21.1 153 5-190 175-383 (464)
106 2xyi_A Probable histone-bindin 99.6 7.6E-14 2.6E-18 137.0 20.1 160 4-190 142-311 (430)
107 1l0q_A Surface layer protein; 99.6 2.3E-13 7.8E-18 129.7 22.8 153 6-190 5-191 (391)
108 4gq1_A NUP37; propeller, trans 99.6 5.3E-14 1.8E-18 136.9 18.3 118 4-134 157-288 (393)
109 1pgu_A Actin interacting prote 99.6 1.5E-13 5E-18 137.9 21.8 135 39-191 56-241 (615)
110 2oaj_A Protein SNI1; WD40 repe 99.6 3.2E-14 1.1E-18 154.3 18.2 121 36-190 8-131 (902)
111 3jro_A Fusion protein of prote 99.6 6.6E-14 2.2E-18 148.2 20.2 107 4-133 22-133 (753)
112 3odt_A Protein DOA1; ubiquitin 99.6 1.2E-13 4.2E-18 126.3 18.4 138 4-190 115-257 (313)
113 3vu4_A KMHSV2; beta-propeller 99.6 9E-14 3.1E-18 133.5 17.7 164 9-189 155-337 (355)
114 2vdu_B TRNA (guanine-N(7)-)-me 99.6 9.8E-14 3.3E-18 136.6 17.6 119 44-190 101-231 (450)
115 1yfq_A Cell cycle arrest prote 99.5 6.4E-14 2.2E-18 130.4 15.1 144 4-190 24-182 (342)
116 3sfz_A APAF-1, apoptotic pepti 99.5 1E-13 3.5E-18 152.2 15.9 153 4-190 1016-1209(1249)
117 1l0q_A Surface layer protein; 99.5 2.1E-12 7.1E-17 123.1 22.9 150 9-190 92-277 (391)
118 3jro_A Fusion protein of prote 99.5 9.8E-14 3.4E-18 146.9 14.7 119 43-190 7-134 (753)
119 4h5i_A Guanine nucleotide-exch 99.5 4.3E-13 1.5E-17 129.6 16.4 71 102-190 134-208 (365)
120 1p22_A F-BOX/WD-repeat protein 99.5 2.1E-12 7.2E-17 126.3 21.0 150 4-190 144-327 (435)
121 2w18_A PALB2, fancn, partner a 99.5 2.1E-12 7.3E-17 126.3 19.4 127 47-190 113-271 (356)
122 2ovr_B FBW7, F-BOX/WD repeat p 99.4 6.1E-12 2.1E-16 123.0 20.6 154 4-190 130-310 (445)
123 2oit_A Nucleoporin 214KDA; NH2 99.4 1.3E-12 4.4E-17 130.1 15.8 154 8-189 113-279 (434)
124 3bws_A Protein LP49; two-domai 99.4 7E-12 2.4E-16 121.1 20.1 119 38-188 295-432 (433)
125 1pby_B Quinohemoprotein amine 99.4 1.2E-11 4E-16 114.2 19.2 148 4-190 2-165 (337)
126 1p22_A F-BOX/WD-repeat protein 99.4 7.4E-12 2.5E-16 122.4 18.1 111 43-190 254-367 (435)
127 4gga_A P55CDC, cell division c 99.4 4.5E-12 1.6E-16 123.6 15.3 110 48-190 108-220 (420)
128 3bws_A Protein LP49; two-domai 99.4 2E-11 6.8E-16 117.9 18.8 141 5-190 183-336 (433)
129 2ovr_B FBW7, F-BOX/WD repeat p 99.4 5.5E-11 1.9E-15 116.2 21.1 129 38-188 271-442 (445)
130 1ri6_A Putative isomerase YBHE 99.4 2.4E-11 8.2E-16 112.4 17.4 146 4-190 5-163 (343)
131 1ri6_A Putative isomerase YBHE 99.3 2.6E-10 9E-15 105.4 22.1 162 36-205 119-332 (343)
132 3u4y_A Uncharacterized protein 99.3 3.3E-10 1.1E-14 105.3 21.7 126 38-190 120-254 (331)
133 2hqs_A Protein TOLB; TOLB, PAL 99.3 2.7E-10 9.3E-15 112.0 19.7 114 44-190 177-302 (415)
134 1jmx_B Amine dehydrogenase; ox 99.2 2.3E-10 7.8E-15 106.3 17.4 146 5-190 13-177 (349)
135 2hqs_A Protein TOLB; TOLB, PAL 99.2 8.1E-10 2.8E-14 108.6 20.4 117 43-191 220-347 (415)
136 1nir_A Nitrite reductase; hemo 99.2 1E-09 3.6E-14 112.3 19.6 152 4-190 191-357 (543)
137 1pby_B Quinohemoprotein amine 99.2 4.2E-09 1.4E-13 97.0 20.9 130 38-190 127-312 (337)
138 3vgz_A Uncharacterized protein 99.1 2.2E-09 7.6E-14 99.9 18.8 130 38-190 81-217 (353)
139 2ojh_A Uncharacterized protein 99.1 8E-10 2.7E-14 99.1 15.2 118 44-190 127-260 (297)
140 2ojh_A Uncharacterized protein 99.1 1.6E-09 5.6E-14 97.0 16.8 127 42-187 38-203 (297)
141 3u4y_A Uncharacterized protein 99.1 2.8E-09 9.5E-14 99.0 18.5 109 50-188 44-160 (331)
142 3hfq_A Uncharacterized protein 99.1 3.9E-09 1.3E-13 99.2 19.3 134 35-190 174-321 (347)
143 1xfd_A DIP, dipeptidyl aminope 99.1 4.9E-10 1.7E-14 115.8 13.7 33 47-79 62-102 (723)
144 3vgz_A Uncharacterized protein 99.1 8.7E-09 3E-13 95.9 19.7 117 48-190 143-264 (353)
145 2ecf_A Dipeptidyl peptidase IV 99.1 1E-09 3.5E-14 114.0 14.1 128 45-190 36-183 (741)
146 1jmx_B Amine dehydrogenase; ox 99.1 7.2E-09 2.5E-13 96.1 18.1 130 37-190 139-327 (349)
147 3hfq_A Uncharacterized protein 99.1 2.4E-09 8.1E-14 100.7 14.9 133 37-190 31-174 (347)
148 1nir_A Nitrite reductase; hemo 99.0 1.2E-08 4.1E-13 104.5 20.5 148 8-190 154-313 (543)
149 3scy_A Hypothetical bacterial 99.0 6.6E-09 2.3E-13 98.3 17.0 120 45-190 210-341 (361)
150 1z68_A Fibroblast activation p 99.0 2E-09 6.7E-14 111.7 12.5 115 47-177 61-185 (719)
151 3o4h_A Acylamino-acid-releasin 99.0 6.8E-09 2.3E-13 105.3 15.6 107 49-190 153-276 (582)
152 2ecf_A Dipeptidyl peptidase IV 99.0 8.1E-09 2.8E-13 107.2 15.4 113 47-177 110-225 (741)
153 1z68_A Fibroblast activation p 98.9 2.5E-09 8.4E-14 111.0 8.0 115 44-190 14-141 (719)
154 3scy_A Hypothetical bacterial 98.9 3.9E-08 1.3E-12 93.0 15.5 124 48-190 157-295 (361)
155 1xfd_A DIP, dipeptidyl aminope 98.9 1.5E-09 5.1E-14 112.2 5.9 117 44-190 15-145 (723)
156 2z3z_A Dipeptidyl aminopeptida 98.8 2.4E-08 8.3E-13 103.1 14.4 130 41-189 116-294 (706)
157 2oiz_A Aromatic amine dehydrog 98.8 1.7E-07 5.7E-12 90.5 18.8 79 107-204 259-356 (361)
158 1jof_A Carboxy-CIS,CIS-muconat 98.8 4.8E-07 1.6E-11 86.4 20.7 133 44-190 143-294 (365)
159 1k32_A Tricorn protease; prote 98.8 1.2E-07 4.2E-12 103.4 17.8 116 43-190 376-504 (1045)
160 1k32_A Tricorn protease; prote 98.8 5.5E-08 1.9E-12 106.1 14.8 115 43-190 334-463 (1045)
161 3o4h_A Acylamino-acid-releasin 98.7 6E-08 2.1E-12 98.3 13.0 109 47-190 111-229 (582)
162 2z3z_A Dipeptidyl aminopeptida 98.7 5.6E-08 1.9E-12 100.4 12.1 111 46-177 82-197 (706)
163 1jof_A Carboxy-CIS,CIS-muconat 98.7 3.8E-07 1.3E-11 87.1 16.2 130 37-189 181-342 (365)
164 4a5s_A Dipeptidyl peptidase 4 98.7 9.4E-08 3.2E-12 100.5 13.0 118 44-190 15-143 (740)
165 3azo_A Aminopeptidase; POP fam 98.5 4.1E-07 1.4E-11 93.2 12.3 115 46-190 130-276 (662)
166 4a5s_A Dipeptidyl peptidase 4 98.5 1.1E-06 3.8E-11 92.2 15.0 75 47-136 63-145 (740)
167 1xip_A Nucleoporin NUP159; bet 98.5 8.4E-07 2.9E-11 87.8 12.9 110 40-190 83-193 (388)
168 1q7f_A NHL, brain tumor CG1071 98.5 4.7E-06 1.6E-10 75.9 16.8 114 46-188 164-280 (286)
169 3pe7_A Oligogalacturonate lyas 98.4 1.8E-06 6.1E-11 81.7 13.3 112 51-190 41-179 (388)
170 3azo_A Aminopeptidase; POP fam 98.4 3.7E-06 1.2E-10 86.1 16.4 127 45-190 187-327 (662)
171 2xdw_A Prolyl endopeptidase; a 98.4 2E-06 6.9E-11 89.7 14.1 113 47-188 126-268 (710)
172 3no2_A Uncharacterized protein 98.4 1.7E-05 5.7E-10 73.9 18.7 151 4-190 6-197 (276)
173 2gop_A Trilobed protease; beta 98.4 5E-06 1.7E-10 77.5 13.6 98 46-178 59-187 (347)
174 1qks_A Cytochrome CD1 nitrite 98.3 1.9E-05 6.6E-10 81.5 17.7 140 38-190 189-375 (567)
175 3dsm_A Uncharacterized protein 98.3 3.5E-05 1.2E-09 72.8 18.0 112 47-190 132-255 (328)
176 2bkl_A Prolyl endopeptidase; m 98.3 5.4E-06 1.8E-10 86.4 13.1 113 46-190 121-263 (695)
177 3fvz_A Peptidyl-glycine alpha- 98.2 1.2E-05 4E-10 75.8 12.8 115 48-187 198-321 (329)
178 3fvz_A Peptidyl-glycine alpha- 98.2 5.5E-05 1.9E-09 71.1 17.4 130 47-190 92-229 (329)
179 3e5z_A Putative gluconolactona 98.2 6.3E-05 2.1E-09 68.9 17.3 112 45-189 171-287 (296)
180 1q7f_A NHL, brain tumor CG1071 98.2 6E-05 2.1E-09 68.5 16.6 115 46-190 121-239 (286)
181 3pe7_A Oligogalacturonate lyas 98.2 5.9E-06 2E-10 78.0 10.1 121 43-190 185-331 (388)
182 3dsm_A Uncharacterized protein 98.2 4.4E-05 1.5E-09 72.1 16.2 121 40-190 78-214 (328)
183 2dg1_A DRP35, lactonase; beta 98.2 0.00013 4.3E-09 67.7 18.5 105 44-177 43-151 (333)
184 3c5m_A Oligogalacturonate lyas 98.1 2.5E-05 8.4E-10 73.5 13.5 116 43-190 185-331 (396)
185 2gop_A Trilobed protease; beta 98.1 2.4E-05 8.3E-10 72.7 13.1 107 46-191 15-164 (347)
186 2oiz_A Aromatic amine dehydrog 98.1 2.5E-05 8.7E-10 75.1 13.2 89 51-173 259-360 (361)
187 3e5z_A Putative gluconolactona 98.1 6.6E-05 2.3E-09 68.8 15.3 113 35-177 19-131 (296)
188 3c5m_A Oligogalacturonate lyas 98.1 9.3E-05 3.2E-09 69.5 16.3 120 47-189 239-385 (396)
189 1pjx_A Dfpase, DIISOPROPYLFLUO 98.1 0.00017 5.9E-09 65.8 16.9 117 47-188 173-299 (314)
190 2dg1_A DRP35, lactonase; beta 98.1 0.00027 9.3E-09 65.4 18.5 115 44-188 85-213 (333)
191 2xdw_A Prolyl endopeptidase; a 98.0 0.00017 5.8E-09 75.1 18.5 130 44-190 231-416 (710)
192 3g4e_A Regucalcin; six bladed 98.0 0.00012 4E-09 67.8 15.5 105 47-176 150-257 (297)
193 1yr2_A Prolyl oligopeptidase; 98.0 5.2E-05 1.8E-09 79.6 13.1 113 47-189 164-304 (741)
194 1qks_A Cytochrome CD1 nitrite 97.9 0.00012 4.1E-09 75.5 15.2 102 57-190 166-277 (567)
195 1xip_A Nucleoporin NUP159; bet 97.9 0.00023 8E-09 70.2 15.8 100 45-177 126-230 (388)
196 1fwx_A Nitrous oxide reductase 97.8 2.3E-05 7.8E-10 81.3 7.1 136 39-190 270-433 (595)
197 1rwi_B Serine/threonine-protei 97.8 0.00024 8.1E-09 63.5 13.0 111 47-188 151-264 (270)
198 3g4e_A Regucalcin; six bladed 97.8 0.00049 1.7E-08 63.6 15.3 119 40-190 48-184 (297)
199 1rwi_B Serine/threonine-protei 97.8 0.00058 2E-08 60.9 14.8 130 46-190 67-224 (270)
200 3sjl_D Methylamine dehydrogena 97.7 0.00023 8E-09 70.2 12.8 114 51-190 38-171 (386)
201 2bkl_A Prolyl endopeptidase; m 97.7 6.5E-05 2.2E-09 78.2 9.1 115 54-190 76-213 (695)
202 2qe8_A Uncharacterized protein 97.7 0.00043 1.5E-08 65.5 14.1 139 33-191 6-157 (343)
203 2ghs_A AGR_C_1268P; regucalcin 97.6 0.00092 3.2E-08 62.8 14.3 115 42-189 86-213 (326)
204 2ghs_A AGR_C_1268P; regucalcin 97.6 0.0028 9.5E-08 59.5 17.0 104 47-176 180-287 (326)
205 2z2n_A Virginiamycin B lyase; 97.6 0.0044 1.5E-07 55.4 17.4 113 46-190 15-130 (299)
206 2iwa_A Glutamine cyclotransfer 97.5 0.0036 1.2E-07 58.5 16.9 124 35-190 8-137 (266)
207 3no2_A Uncharacterized protein 97.5 0.0011 3.8E-08 61.3 13.3 98 60-190 7-109 (276)
208 3dr2_A Exported gluconolactona 97.5 0.0028 9.7E-08 58.5 15.9 113 34-177 35-147 (305)
209 3iuj_A Prolyl endopeptidase; h 97.5 0.0012 4E-08 68.9 14.1 112 46-189 129-269 (693)
210 2z2n_A Virginiamycin B lyase; 97.5 0.0045 1.5E-07 55.4 16.0 113 46-190 99-214 (299)
211 2mad_H Methylamine dehydrogena 97.4 0.0028 9.7E-08 61.4 15.6 112 50-190 70-197 (373)
212 3nol_A Glutamine cyclotransfer 97.4 0.0031 1.1E-07 59.0 14.8 123 34-190 29-157 (262)
213 3dr2_A Exported gluconolactona 97.4 0.0022 7.6E-08 59.2 13.7 115 44-189 84-225 (305)
214 3hrp_A Uncharacterized protein 97.4 0.0024 8.2E-08 62.5 14.5 114 47-190 132-251 (409)
215 2ece_A 462AA long hypothetical 97.4 0.0022 7.7E-08 64.5 14.3 120 51-190 87-239 (462)
216 1yr2_A Prolyl oligopeptidase; 97.4 0.0015 5.3E-08 68.3 13.7 33 46-78 268-304 (741)
217 1pjx_A Dfpase, DIISOPROPYLFLUO 97.3 0.0021 7.1E-08 58.5 12.4 112 47-190 118-258 (314)
218 2hz6_A Endoplasmic reticulum t 97.3 3.7E-05 1.3E-09 74.3 0.2 138 4-190 10-151 (369)
219 3sjl_D Methylamine dehydrogena 97.3 0.0047 1.6E-07 60.8 14.7 82 51-142 83-179 (386)
220 3mbr_X Glutamine cyclotransfer 97.3 0.0083 2.8E-07 55.4 15.5 123 34-190 7-135 (243)
221 3nok_A Glutaminyl cyclase; bet 97.2 0.0056 1.9E-07 57.4 13.6 125 30-190 37-166 (268)
222 2mad_H Methylamine dehydrogena 97.1 0.0086 2.9E-07 57.9 15.1 79 103-199 268-365 (373)
223 1fwx_A Nitrous oxide reductase 97.1 0.0072 2.5E-07 62.7 14.6 112 46-189 134-309 (595)
224 3c75_H MADH, methylamine dehyd 97.1 0.004 1.4E-07 62.0 12.3 110 55-190 82-211 (426)
225 2qc5_A Streptogramin B lactona 97.0 0.045 1.6E-06 48.7 17.7 120 39-190 10-135 (300)
226 2qc5_A Streptogramin B lactona 97.0 0.076 2.6E-06 47.2 18.7 113 46-190 62-177 (300)
227 2qe8_A Uncharacterized protein 96.9 0.0075 2.6E-07 56.8 12.1 111 46-178 195-308 (343)
228 1mda_H Methylamine dehydrogena 96.9 0.0029 1E-07 61.7 9.2 116 48-188 21-158 (368)
229 3hrp_A Uncharacterized protein 96.8 0.018 6.1E-07 56.3 14.4 132 50-186 271-408 (409)
230 2hz6_A Endoplasmic reticulum t 96.8 0.00072 2.5E-08 65.2 3.9 103 56-190 8-113 (369)
231 1mda_H Methylamine dehydrogena 96.8 0.0045 1.5E-07 60.4 9.6 82 50-145 268-359 (368)
232 1kb0_A Quinohemoprotein alcoho 96.7 0.012 4E-07 61.7 12.4 122 51-190 318-509 (677)
233 2xe4_A Oligopeptidase B; hydro 96.6 0.014 4.8E-07 61.6 12.7 112 47-189 175-305 (751)
234 3c75_H MADH, methylamine dehyd 96.5 0.015 5E-07 58.0 11.4 78 104-199 321-417 (426)
235 2iwa_A Glutamine cyclotransfer 96.5 0.039 1.3E-06 51.5 13.4 121 37-177 97-222 (266)
236 3iuj_A Prolyl endopeptidase; h 96.5 0.055 1.9E-06 56.2 15.9 114 45-190 233-361 (693)
237 3nol_A Glutamine cyclotransfer 96.4 0.027 9.3E-07 52.6 11.6 123 37-177 118-241 (262)
238 1yiq_A Quinohemoprotein alcoho 96.3 0.016 5.6E-07 60.7 10.8 79 68-176 455-533 (689)
239 1npe_A Nidogen, entactin; glyc 96.1 0.43 1.5E-05 42.6 17.7 130 47-189 37-199 (267)
240 1kb0_A Quinohemoprotein alcoho 96.0 0.03 1E-06 58.5 10.9 79 68-176 457-535 (677)
241 3nok_A Glutaminyl cyclase; bet 95.9 0.099 3.4E-06 48.9 12.7 122 36-177 126-251 (268)
242 1yiq_A Quinohemoprotein alcoho 95.7 0.12 4.3E-06 53.9 14.2 51 122-190 454-507 (689)
243 2p4o_A Hypothetical protein; p 95.7 0.85 2.9E-05 41.8 18.4 87 34-136 20-108 (306)
244 2ece_A 462AA long hypothetical 95.7 0.099 3.4E-06 52.5 12.6 147 37-187 239-408 (462)
245 3mbr_X Glutamine cyclotransfer 95.6 0.49 1.7E-05 43.4 16.3 44 37-80 54-97 (243)
246 2fp8_A Strictosidine synthase; 95.4 0.32 1.1E-05 44.8 14.5 113 47-188 81-216 (322)
247 3tc9_A Hypothetical hydrolase; 95.1 0.38 1.3E-05 47.2 14.6 112 47-187 180-300 (430)
248 1npe_A Nidogen, entactin; glyc 95.0 0.78 2.7E-05 40.8 15.3 111 47-190 123-240 (267)
249 2fp8_A Strictosidine synthase; 94.9 0.57 1.9E-05 43.1 14.4 113 48-187 187-312 (322)
250 2ad6_A Methanol dehydrogenase 94.6 0.41 1.4E-05 48.9 13.9 121 52-190 308-496 (571)
251 1flg_A Protein (quinoprotein e 93.9 0.66 2.3E-05 47.5 13.7 64 67-144 465-528 (582)
252 3sbq_A Nitrous-oxide reductase 93.8 0.13 4.3E-06 53.2 7.8 106 38-146 315-432 (638)
253 2ad6_A Methanol dehydrogenase 93.7 0.29 1E-05 49.9 10.6 63 67-143 443-505 (571)
254 2p4o_A Hypothetical protein; p 93.4 0.43 1.5E-05 43.8 10.2 98 48-177 171-274 (306)
255 1flg_A Protein (quinoprotein e 93.4 0.9 3.1E-05 46.5 13.6 51 122-190 465-518 (582)
256 3q7m_A Lipoprotein YFGL, BAMB; 93.2 5 0.00017 37.1 17.6 105 57-190 103-209 (376)
257 1kv9_A Type II quinohemoprotei 92.8 0.3 1E-05 50.8 9.0 63 67-143 437-499 (668)
258 1ijq_A LDL receptor, low-densi 92.1 6.7 0.00023 36.1 16.7 111 48-188 79-195 (316)
259 3sre_A PON1, serum paraoxonase 92.0 0.48 1.7E-05 45.8 8.7 88 38-140 216-308 (355)
260 1k3i_A Galactose oxidase precu 91.3 2.4 8.3E-05 43.4 13.7 120 44-190 184-325 (656)
261 1kv9_A Type II quinohemoprotei 91.3 1.2 4.1E-05 46.2 11.4 52 122-191 437-491 (668)
262 3sre_A PON1, serum paraoxonase 91.3 2 7E-05 41.3 12.3 110 48-187 114-251 (355)
263 3q7m_A Lipoprotein YFGL, BAMB; 90.9 3.1 0.00011 38.6 13.0 96 58-190 240-339 (376)
264 4hw6_A Hypothetical protein, I 90.9 5.8 0.0002 38.7 15.5 31 48-79 141-173 (433)
265 3qqz_A Putative uncharacterize 90.8 9 0.00031 35.0 15.7 124 47-187 122-252 (255)
266 2xe4_A Oligopeptidase B; hydro 90.7 2.6 8.8E-05 44.2 13.4 75 48-133 223-305 (751)
267 4hw6_A Hypothetical protein, I 90.7 13 0.00045 36.2 17.9 131 49-187 276-432 (433)
268 3pbp_A Nucleoporin NUP82; beta 90.6 1.2 4.1E-05 44.5 10.1 84 47-132 67-158 (452)
269 3tc9_A Hypothetical hydrolase; 90.4 2.3 7.9E-05 41.5 12.0 109 48-190 139-259 (430)
270 3v64_C Agrin; beta propeller, 90.0 13 0.00043 34.9 18.6 111 48-188 118-234 (349)
271 3v65_B Low-density lipoprotein 90.0 13 0.00046 35.2 17.2 111 48-188 161-277 (386)
272 1w6s_A Methanol dehydrogenase 89.8 5.8 0.0002 40.8 14.9 29 55-83 318-348 (599)
273 3p5b_L Low density lipoprotein 89.3 12 0.00042 35.8 16.1 116 46-187 112-233 (400)
274 3kya_A Putative phosphatase; s 89.3 4.5 0.00015 40.8 13.3 116 47-186 187-339 (496)
275 1w6s_A Methanol dehydrogenase 89.2 1.7 5.9E-05 44.7 10.4 63 68-144 453-515 (599)
276 3pbp_A Nucleoporin NUP82; beta 88.8 5.9 0.0002 39.5 13.4 112 52-188 27-158 (452)
277 3m0c_C LDL receptor, low-densi 88.7 25 0.00086 37.3 19.3 111 48-188 473-589 (791)
278 3hxj_A Pyrrolo-quinoline quino 88.5 6.5 0.00022 35.1 12.8 106 47-190 138-245 (330)
279 4a2l_A BT_4663, two-component 88.2 14 0.00047 38.5 16.7 124 46-190 357-482 (795)
280 3amr_A 3-phytase; beta-propell 88.1 6.4 0.00022 38.0 12.9 124 37-186 60-206 (355)
281 3hxj_A Pyrrolo-quinoline quino 87.8 12 0.0004 33.4 14.0 107 46-187 215-323 (330)
282 2ism_A Putative oxidoreductase 87.5 6.6 0.00023 37.0 12.6 84 35-133 22-115 (352)
283 3qqz_A Putative uncharacterize 86.8 18 0.00062 32.9 17.3 119 44-186 25-149 (255)
284 3p5b_L Low density lipoprotein 85.6 26 0.00088 33.5 19.1 112 47-188 160-277 (400)
285 3kya_A Putative phosphatase; s 85.1 5.7 0.00019 40.1 11.2 112 48-187 141-277 (496)
286 3v64_C Agrin; beta propeller, 85.0 25 0.00085 32.8 16.6 111 47-187 74-190 (349)
287 2g8s_A Glucose/sorbosone dehyd 84.7 7.1 0.00024 36.8 11.2 86 35-131 9-106 (353)
288 2ism_A Putative oxidoreductase 84.2 16 0.00056 34.2 13.6 70 46-121 75-154 (352)
289 2p9w_A MAL S 1 allergenic prot 83.2 28 0.00094 33.2 14.6 127 48-187 65-214 (334)
290 4a2l_A BT_4663, two-component 82.9 17 0.00059 37.7 14.3 117 48-190 175-293 (795)
291 3s94_A LRP-6, low-density lipo 82.3 31 0.0011 35.2 15.7 103 47-179 41-145 (619)
292 3ei3_A DNA damage-binding prot 82.3 24 0.00081 39.2 15.6 87 38-140 504-599 (1158)
293 1ijq_A LDL receptor, low-densi 82.1 30 0.001 31.6 18.4 113 47-190 121-240 (316)
294 3m0c_C LDL receptor, low-densi 82.0 40 0.0014 35.7 16.8 116 46-187 424-545 (791)
295 4gq2_M Nucleoporin NUP120; bet 81.2 9.7 0.00033 41.3 11.9 41 102-142 236-276 (950)
296 1k3i_A Galactose oxidase precu 80.7 4 0.00014 41.8 8.3 77 47-135 244-326 (656)
297 3amr_A 3-phytase; beta-propell 80.4 40 0.0014 32.4 14.7 117 46-190 128-266 (355)
298 3a9g_A Putative uncharacterize 79.2 20 0.00067 33.8 12.1 84 35-133 20-115 (354)
299 3sov_A LRP-6, low-density lipo 78.8 41 0.0014 31.0 18.7 110 48-188 81-197 (318)
300 3v65_B Low-density lipoprotein 77.8 48 0.0016 31.3 18.6 112 47-190 203-320 (386)
301 3a9g_A Putative uncharacterize 77.7 47 0.0016 31.1 14.3 72 46-121 73-154 (354)
302 3v9f_A Two-component system se 77.4 44 0.0015 34.5 15.1 118 46-190 495-613 (781)
303 1n7d_A LDL receptor, low-densi 76.6 4.8 0.00017 42.0 7.5 110 49-188 456-571 (699)
304 1n7d_A LDL receptor, low-densi 76.0 7.6 0.00026 40.5 8.8 113 48-190 498-616 (699)
305 1cru_A Protein (soluble quinop 75.5 37 0.0013 33.2 13.3 77 35-120 18-99 (454)
306 4fhn_B Nucleoporin NUP120; pro 74.5 8.9 0.00031 42.3 9.3 41 102-142 238-278 (1139)
307 1cru_A Protein (soluble quinop 73.7 70 0.0024 31.2 15.1 73 46-122 77-164 (454)
308 4a0p_A LRP6, LRP-6, low-densit 73.1 86 0.0029 32.0 19.5 111 47-188 81-197 (628)
309 3v9f_A Two-component system se 72.0 67 0.0023 33.0 14.9 118 46-190 407-526 (781)
310 2xbg_A YCF48-like protein; pho 71.3 62 0.0021 29.6 14.1 73 102-192 163-238 (327)
311 3ei3_A DNA damage-binding prot 69.9 35 0.0012 37.8 12.6 87 35-134 543-640 (1158)
312 3sov_A LRP-6, low-density lipo 69.9 68 0.0023 29.5 16.6 112 47-190 123-240 (318)
313 2xzh_A Clathrin heavy chain 1; 67.6 91 0.0031 30.0 14.2 102 68-204 49-169 (365)
314 1bpo_A Protein (clathrin); cla 67.0 1.1E+02 0.0037 30.7 14.9 43 103-145 260-302 (494)
315 2g8s_A Glucose/sorbosone dehyd 64.2 53 0.0018 30.7 11.1 71 47-121 67-149 (353)
316 2p9w_A MAL S 1 allergenic prot 63.5 58 0.002 31.0 11.2 75 47-133 138-216 (334)
317 2xzh_A Clathrin heavy chain 1; 62.9 1.1E+02 0.0038 29.4 14.9 43 103-145 261-303 (365)
318 3das_A Putative oxidoreductase 61.5 1.1E+02 0.0038 28.9 15.1 86 35-131 23-115 (347)
319 1bpo_A Protein (clathrin); cla 58.4 1.5E+02 0.0052 29.7 13.4 62 67-145 47-108 (494)
320 4a0p_A LRP6, LRP-6, low-densit 57.4 1.7E+02 0.0058 29.8 15.8 102 47-179 38-141 (628)
321 2wg3_C Hedgehog-interacting pr 57.4 96 0.0033 30.5 12.0 37 36-76 6-44 (463)
322 1tl2_A L10, protein (tachylect 43.3 1.4E+02 0.0047 27.0 9.6 89 32-132 28-116 (236)
323 3f7f_A Nucleoporin NUP120; nuc 43.0 36 0.0012 35.9 6.5 31 112-142 230-260 (729)
324 4gq2_M Nucleoporin NUP120; bet 41.7 1.1E+02 0.0038 32.9 10.3 35 45-80 235-269 (950)
325 3q6k_A 43.2 kDa salivary prote 38.5 1.8E+02 0.0063 27.9 10.4 87 47-140 88-198 (381)
326 3lcn_C MRNA transport factor G 35.6 26 0.00088 21.0 2.3 14 275-288 7-20 (29)
327 4a9v_A PHOX; hydrolase, beta-p 35.6 1.4E+02 0.0047 30.7 9.2 60 102-177 476-547 (592)
328 3s94_A LRP-6, low-density lipo 35.5 3.6E+02 0.012 27.2 18.8 111 47-187 85-201 (619)
329 4f3f_C Mesothelin; antibody FA 35.3 18 0.00062 26.4 1.9 49 218-285 10-58 (69)
330 2xbg_A YCF48-like protein; pho 34.8 2.6E+02 0.0087 25.2 14.8 120 44-192 161-282 (327)
331 1tl2_A L10, protein (tachylect 32.9 1.3E+02 0.0045 27.2 7.6 66 102-186 41-114 (236)
332 3ott_A Two-component system se 30.7 3.8E+02 0.013 27.1 12.0 112 48-190 474-588 (758)
333 3das_A Putative oxidoreductase 28.2 3.8E+02 0.013 25.1 11.1 34 102-135 32-65 (347)
334 4fhn_B Nucleoporin NUP120; pro 25.2 1.3E+02 0.0045 32.9 7.6 27 164-190 241-270 (1139)
335 2xn4_A Kelch-like protein 2; s 23.8 1.3E+02 0.0043 26.5 6.0 24 112-135 251-279 (302)
336 2vpj_A Kelch-like protein 12; 23.4 1.7E+02 0.0057 25.6 6.8 24 112-135 253-281 (301)
337 1xi4_A Clathrin heavy chain; a 22.4 2.2E+02 0.0076 32.7 8.6 101 67-202 47-166 (1630)
338 2be1_A Serine/threonine-protei 20.1 5.4E+02 0.018 24.0 9.9 83 60-142 12-140 (339)
No 1
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.85 E-value=2.2e-20 Score=180.99 Aligned_cols=125 Identities=14% Similarity=0.113 Sum_probs=99.3
Q ss_pred CCEeEEEEcCCCCEEE-EEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC-----------------------
Q psy2085 46 GVSTSVRISPDGQYVL-STGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS----------------------- 101 (358)
Q Consensus 46 ~~v~~v~~SpDG~~Ll-atG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s----------------------- 101 (358)
..+.+|+|||||++|+ |+|++|++|+|||+.+....+.-....++..+ .+|||..
T Consensus 134 ~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v-~fspdg~~l~s~s~~~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 134 DYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDL-HFSTDGKVVAYITGSSLEVISTVTGSCIAR 212 (365)
T ss_dssp CCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEE-EECTTSSEEEEECSSCEEEEETTTCCEEEE
T ss_pred cCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEE-EEccCCceEEeccceeEEEEEeccCcceee
Confidence 4588999999999875 56778999999999876554432222232221 1222221
Q ss_pred ---------------------------------------------------------CCeeEEEEcCCCCEEEEEeCCCe
Q psy2085 102 ---------------------------------------------------------SELNSIAINPVHQLICVGTIEGK 124 (358)
Q Consensus 102 ---------------------------------------------------------~~In~i~~np~~~llasGs~DGt 124 (358)
..|++|+|+|++++||+|+.||+
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~ 292 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNS 292 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSC
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCE
Confidence 56999999999999999999999
Q ss_pred EEEEeCCCCceeEEE-eCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCC
Q psy2085 125 VEAWDPRMKVKAGTL-DCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEI 188 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L-~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~t 188 (358)
|++||+++++++.++ .+|...| ++|+|||||++|+| .| +|||||+..
T Consensus 293 V~iwd~~~~~~~~~~~~gH~~~V-----------------~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 293 IALVKLKDLSMSKIFKQAHSFAI-----------------TEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEEETTTTEEEEEETTSSSSCE-----------------EEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred EEEEECCCCcEEEEecCcccCCE-----------------EEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 999999999999875 6888887 88999999999997 57 999999964
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.83 E-value=9.5e-19 Score=164.11 Aligned_cols=155 Identities=17% Similarity=0.216 Sum_probs=120.7
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.|..++|.|+++..|+ +... .+.+.+ .|...|.+++|+| ++.+ +++|+.|++|+|||+.+...
T Consensus 110 ~~l~sgs~D~~v~lWd~~~~~-------------~~~~~~~~h~~~v~~v~~~p~~~~~-l~sgs~D~~v~iwd~~~~~~ 175 (304)
T 2ynn_A 110 PYVLSGSDDLTVKLWNWENNW-------------ALEQTFEGHEHFVMCVAFNPKDPST-FASGCLDRTVKVWSLGQSTP 175 (304)
T ss_dssp SEEEEEETTSCEEEEEGGGTT-------------EEEEEECCCCSCEEEEEECTTCTTE-EEEEETTSEEEEEETTCSSC
T ss_pred CEEEEECCCCeEEEEECCCCc-------------chhhhhcccCCcEEEEEECCCCCCE-EEEEeCCCeEEEEECCCCCc
Confidence 4788999999999999 3321 234445 3778899999999 5565 57889999999999976432
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcC--CCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccc
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINP--VHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGK 158 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np--~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~Gt 158 (358)
.+.. ...+...|++++|+| ++.+|++|+.||+|++||+++++++.++.+|...+
T Consensus 176 ~~~~------------~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v------------ 231 (304)
T 2ynn_A 176 NFTL------------TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNV------------ 231 (304)
T ss_dssp SEEE------------ECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCE------------
T ss_pred ccee------------ccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCE------------
Confidence 2211 112225789999987 67799999999999999999999999999998877
Q ss_pred cCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCcE---EecCCCCCcc
Q psy2085 159 ASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKKT---YNLGPAPKWC 201 (358)
Q Consensus 159 Rs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~~---y~lgpap~Wc 201 (358)
..+.|+|++..|+| .| +|+|||..+++. +..+..+.||
T Consensus 232 -----~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~ 275 (304)
T 2ynn_A 232 -----SFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWC 275 (304)
T ss_dssp -----EEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEE
T ss_pred -----EEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEE
Confidence 78999999999997 47 999999999883 2334445564
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.82 E-value=9.6e-19 Score=168.86 Aligned_cols=160 Identities=12% Similarity=0.109 Sum_probs=111.1
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee--e
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK--F 82 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk--~ 82 (358)
+..+++.|+++..|+-...+.+ .+.......|...|++|+|+|||++| ++|+.|++|+|||+.+.... +
T Consensus 95 ~l~~~s~dg~v~lWd~~~~~~~--------~~~~~~~~~H~~~V~~v~~spdg~~l-~sgs~d~~i~iwd~~~~~~~~~~ 165 (344)
T 4gqb_B 95 GILVASDSGAVELWELDENETL--------IVSKFCKYEHDDIVSTVSVLSSGTQA-VSGSKDICIKVWDLAQQVVLSSY 165 (344)
T ss_dssp EEEEEETTSEEEEEEECTTSSC--------EEEEEEEECCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTTEEEEEE
T ss_pred eEEEEECCCEEEEEeccCCCce--------eEeeccccCCCCCEEEEEECCCCCEE-EEEeCCCeEEEEECCCCcEEEEE
Confidence 5678999999999993222111 11112234688999999999999987 67889999999999875432 1
Q ss_pred eeeccCceEEEEEe-----------ecCCC---------------------CCeeEEEEcCC-CCEEEEEeCCCeEEEEe
Q psy2085 83 ERCFDSEVVTFEIL-----------SDDYS---------------------SELNSIAINPV-HQLICVGTIEGKVEAWD 129 (358)
Q Consensus 83 ~r~~d~e~v~f~~L-----------S~D~s---------------------~~In~i~~np~-~~llasGs~DGtV~iWD 129 (358)
..|. ..+ ....+ +.|.+ ..+++++|+|+ +.+|++|+.||+|++||
T Consensus 166 ~~h~-~~V-~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd 243 (344)
T 4gqb_B 166 RAHA-AQV-TCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVD 243 (344)
T ss_dssp CCCS-SCE-EEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred cCcC-Cce-EEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEE
Confidence 2222 122 11111 22222 35778888885 45788888888888888
Q ss_pred CCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCC-EEEE--ec-ceEEEECCCCcEE
Q psy2085 130 PRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEE-EEES--SD-DDQAWTKEIKKTY 192 (358)
Q Consensus 130 ~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~-~llS--aD-~IKIWD~~tG~~y 192 (358)
+++++++.++.+|...+ ++|+|+|++. +|+| .| +|+|||..+|+.+
T Consensus 244 ~~~~~~~~~~~~h~~~v-----------------~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 244 TKSTSCVLSSAVHSQCV-----------------TGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF 293 (344)
T ss_dssp SCC--CCEEEECCSSCE-----------------EEEEECSSSSCCEEEEETTSCEEEECTTCCEEE
T ss_pred CCCCcEEEEEcCCCCCE-----------------EEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE
Confidence 88888888888877776 8899999985 6775 47 9999999998744
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.81 E-value=2.1e-18 Score=163.87 Aligned_cols=156 Identities=17% Similarity=0.225 Sum_probs=114.3
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.++.++|.|+++..|+-... ++++.+. ++..+.+++|+|||++| ++|+.++.|++||+.+.....
T Consensus 93 ~~l~s~s~D~~i~lWd~~~~-------------~~~~~~~~~~~~~~~~~~spdg~~l-~~g~~dg~v~i~~~~~~~~~~ 158 (321)
T 3ow8_A 93 PIAASSSLDAHIRLWDLENG-------------KQIKSIDAGPVDAWTLAFSPDSQYL-ATGTHVGKVNIFGVESGKKEY 158 (321)
T ss_dssp SEEEEEETTSEEEEEETTTT-------------EEEEEEECCTTCCCCEEECTTSSEE-EEECTTSEEEEEETTTCSEEE
T ss_pred CEEEEEeCCCcEEEEECCCC-------------CEEEEEeCCCccEEEEEECCCCCEE-EEEcCCCcEEEEEcCCCceeE
Confidence 46788999999999993222 1233343 56778999999999987 678889999999998754332
Q ss_pred eeeccCceEEEEEeecCCC-----------------------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy2085 83 ERCFDSEVVTFEILSDDYS-----------------------------SELNSIAINPVHQLICVGTIEGKVEAWDPRMK 133 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s-----------------------------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~ 133 (358)
........+....++||.. ..|++++|+|++++|++|+.||+|++||++++
T Consensus 159 ~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~ 238 (321)
T 3ow8_A 159 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA 238 (321)
T ss_dssp EEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC
T ss_pred EecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc
Confidence 2111111222222222221 56888888888888888888888888888888
Q ss_pred ceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 134 VKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 134 ~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
..+.++.+|...+ .+++|+|++.+|+| .| +|+|||+.+++
T Consensus 239 ~~~~~~~~h~~~v-----------------~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 239 NLAGTLSGHASWV-----------------LNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp CEEEEECCCSSCE-----------------EEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred ceeEEEcCCCCce-----------------EEEEECCCCCEEEEEeCCCcEEEEeCCCCE
Confidence 8888888777666 78999999999997 46 99999999987
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.81 E-value=3.5e-18 Score=162.40 Aligned_cols=158 Identities=16% Similarity=0.057 Sum_probs=119.8
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.+..++|.|+++..|.-.. .+.++...++ |...|.+++|+|++.++ +||+.|++|+|||+.+.....
T Consensus 49 ~~l~tgs~D~~v~vW~~~~-----------~~~~~~~~l~gh~~~v~~~~~~~~~~~l-~s~s~D~~i~lWd~~~~~~~~ 116 (321)
T 3ow8_A 49 ETVVTGSLDDLVKVWKWRD-----------ERLDLQWSLEGHQLGVVSVDISHTLPIA-ASSSLDAHIRLWDLENGKQIK 116 (321)
T ss_dssp CEEEEEETTSCEEEEEEET-----------TEEEEEEEECCCSSCEEEEEECSSSSEE-EEEETTSEEEEEETTTTEEEE
T ss_pred CEEEEEcCCCCEEEEECCC-----------CCeeeeeeeccCCCCEEEEEECCCCCEE-EEEeCCCcEEEEECCCCCEEE
Confidence 3788999999999998321 1234444554 78899999999999965 678899999999998653221
Q ss_pred eeeccCceEEEEEeecCC-----------------------------CCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy2085 83 ERCFDSEVVTFEILSDDY-----------------------------SSELNSIAINPVHQLICVGTIEGKVEAWDPRMK 133 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~-----------------------------s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~ 133 (358)
.-......+....++||. ...|.+++|+|++.+||+|+.||+|++||++++
T Consensus 117 ~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~ 196 (321)
T 3ow8_A 117 SIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG 196 (321)
T ss_dssp EEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred EEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 111000001111112221 156899999999999999999999999999999
Q ss_pred ceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 134 VKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 134 ~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+.+.++.+|..++ .+|+|+|++++|+| .| +|+|||+.+++
T Consensus 197 ~~~~~~~~h~~~v-----------------~~l~~spd~~~l~s~s~dg~i~iwd~~~~~ 239 (321)
T 3ow8_A 197 KLLHTLEGHAMPI-----------------RSLTFSPDSQLLVTASDDGYIKIYDVQHAN 239 (321)
T ss_dssp EEEEEECCCSSCC-----------------CEEEECTTSCEEEEECTTSCEEEEETTTCC
T ss_pred cEEEEEcccCCce-----------------eEEEEcCCCCEEEEEcCCCeEEEEECCCcc
Confidence 9999999888776 78999999999997 46 99999999887
No 6
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.79 E-value=1e-17 Score=158.37 Aligned_cols=171 Identities=16% Similarity=0.183 Sum_probs=119.5
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|.+++|.|+++..|+-... ++++.| .|...|.+++|+|+|++| ++|+.|++|+|||+....+..
T Consensus 78 ~~l~s~s~D~~v~~wd~~~~-------------~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~i~vwd~~~~~~~~ 143 (319)
T 3frx_A 78 AYALSASWDKTLRLWDVATG-------------ETYQRFVGHKSDVMSVDIDKKASMI-ISGSRDKTIKVWTIKGQCLAT 143 (319)
T ss_dssp SEEEEEETTSEEEEEETTTT-------------EEEEEEECCSSCEEEEEECTTSCEE-EEEETTSCEEEEETTSCEEEE
T ss_pred CEEEEEeCCCEEEEEECCCC-------------CeeEEEccCCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEE
Confidence 58899999999999993222 234455 478899999999999976 678899999999997543221
Q ss_pred -eeeccCceEE---------------EEEeecC-------------------CCCCeeEEEEcCCCCEEEEEeCCCeEEE
Q psy2085 83 -ERCFDSEVVT---------------FEILSDD-------------------YSSELNSIAINPVHQLICVGTIEGKVEA 127 (358)
Q Consensus 83 -~r~~d~e~v~---------------f~~LS~D-------------------~s~~In~i~~np~~~llasGs~DGtV~i 127 (358)
..|. ..+.. +...+.| +...|++++|+|++.+|++|+.||+|++
T Consensus 144 ~~~h~-~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~i 222 (319)
T 3frx_A 144 LLGHN-DWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIML 222 (319)
T ss_dssp ECCCS-SCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred EeccC-CcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 1111 11111 1111122 3368999999999999999999999999
Q ss_pred EeCCCCceeEEEeCCCCccccccCCCccc---cc------------------cC--------CCc--eeeEEcCCCCEEE
Q psy2085 128 WDPRMKVKAGTLDCAFNCISNERDTEEKE---GK------------------AS--------SDE--SSEEEEEEEEEEE 176 (358)
Q Consensus 128 WD~Rs~~~i~~L~~~~~~v~~~~~i~gl~---Gt------------------Rs--------~~P--~sI~fs~d~~~ll 176 (358)
||+++++++.++..+.......|++++.. ++ +. ..+ .+|+|+|+|++|+
T Consensus 223 wd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~ 302 (319)
T 3frx_A 223 WNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLF 302 (319)
T ss_dssp EETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEE
T ss_pred EECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEE
Confidence 99999999988876543322334444311 00 10 011 6889999999998
Q ss_pred E--ec-ceEEEECCCC
Q psy2085 177 S--SD-DDQAWTKEIK 189 (358)
Q Consensus 177 S--aD-~IKIWD~~tG 189 (358)
| .| +|+|||+.|+
T Consensus 303 sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 303 AGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEETTSCEEEEEEEEC
T ss_pred EeecCceEEEEEEeec
Confidence 6 46 9999998765
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.79 E-value=1.2e-17 Score=158.94 Aligned_cols=147 Identities=14% Similarity=0.180 Sum_probs=107.2
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee--e
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK--F 82 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk--~ 82 (358)
.++++.|+++..|+-... +++..|. |.+.|.+++|+|+|++| ++|+.|++|++||+.+.... +
T Consensus 157 l~s~s~d~~i~~wd~~~~-------------~~~~~~~~h~~~v~~~~~~~~~~~l-~sg~~d~~v~~wd~~~~~~~~~~ 222 (340)
T 1got_B 157 IVTSSGDTTCALWDIETG-------------QQTTTFTGHTGDVMSLSLAPDTRLF-VSGACDASAKLWDVREGMCRQTF 222 (340)
T ss_dssp EEEEETTSCEEEEETTTT-------------EEEEEECCCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTCSEEEEE
T ss_pred EEEEECCCcEEEEECCCC-------------cEEEEEcCCCCceEEEEECCCCCEE-EEEeCCCcEEEEECCCCeeEEEE
Confidence 567889999999983222 2344453 77889999999999976 67888999999999875432 2
Q ss_pred eeeccCceEEEEEeecCCC-------------------------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy2085 83 ERCFDSEVVTFEILSDDYS-------------------------------SELNSIAINPVHQLICVGTIEGKVEAWDPR 131 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s-------------------------------~~In~i~~np~~~llasGs~DGtV~iWD~R 131 (358)
..|. ..+....++|+.. ..|++++|+|++.+|++|+.||+|++||++
T Consensus 223 ~~h~--~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~ 300 (340)
T 1got_B 223 TGHE--SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300 (340)
T ss_dssp CCCS--SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred cCCc--CCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcc
Confidence 1221 1122222222211 357888888888888888888888888888
Q ss_pred CCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEE
Q psy2085 132 MKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWT 185 (358)
Q Consensus 132 s~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD 185 (358)
++.++.++.+|...+ .+|+|+|+|.+|+| .| +|+|||
T Consensus 301 ~~~~~~~~~~h~~~v-----------------~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 301 KADRAGVLAGHDNRV-----------------SCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TCCEEEEEECCSSCE-----------------EEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cCcEeeEeecCCCcE-----------------EEEEEcCCCCEEEEEcCCccEEecC
Confidence 888888888777766 88999999999997 47 999997
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.79 E-value=4.1e-18 Score=159.75 Aligned_cols=136 Identities=15% Similarity=0.231 Sum_probs=98.7
Q ss_pred eeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee-eeccCceEEEEEee----------cC----
Q psy2085 36 IELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE-RCFDSEVVTFEILS----------DD---- 99 (358)
Q Consensus 36 Ieliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~-r~~d~e~v~f~~LS----------~D---- 99 (358)
+++.+.|. |.+.|++|+|||||++| +||+.|++|+|||+.+...... ...... +....++ .|
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~~~l-~s~~~dg~v~lWd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~s~s~d~~i~ 80 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWV-LTTLYSGRVELWNYETQVEVRSIQVTETP-VRAGKFIARKNWIIVGSDDFRIR 80 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEE-EEEETTSEEEEEETTTTEEEEEEECCSSC-EEEEEEEGGGTEEEEEETTSEEE
T ss_pred ceeEEeecCCCCceEEEEECCCCCEE-EEEcCCCcEEEEECCCCceeEEeeccCCc-EEEEEEeCCCCEEEEECCCCEEE
Confidence 34555664 78899999999999987 5678999999999987532211 111111 2111111 12
Q ss_pred ---------------CCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-eeEEEeCCCCccccccCCCccccccCCCc
Q psy2085 100 ---------------YSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKV-KAGTLDCAFNCISNERDTEEKEGKASSDE 163 (358)
Q Consensus 100 ---------------~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~-~i~~L~~~~~~v~~~~~i~gl~GtRs~~P 163 (358)
+.+.|++|+|+|++.+|++|+.||+|++||++++. ....+.+|...+
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v----------------- 143 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFV----------------- 143 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCE-----------------
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcE-----------------
Confidence 12678999999999999999999999999988774 456677777766
Q ss_pred eeeEEcC-CCCEEEE--ec-ceEEEECCCCc
Q psy2085 164 SSEEEEE-EEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 164 ~sI~fs~-d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+++|+| ++..|+| .| +|+|||+.++.
T Consensus 144 ~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~ 174 (304)
T 2ynn_A 144 MCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (304)
T ss_dssp EEEEECTTCTTEEEEEETTSEEEEEETTCSS
T ss_pred EEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 8899999 5678886 47 99999998765
No 9
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.79 E-value=2.9e-17 Score=152.69 Aligned_cols=177 Identities=16% Similarity=0.117 Sum_probs=115.5
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.|..++|.|+++..|+ ..... ....+++.+ .|...|.+++|+|||++| ++|+.|+.|++|+.......
T Consensus 52 ~~l~S~s~D~~i~vWd~~~~~~---------~~~~~~~~l~~h~~~V~~~~~s~dg~~l-~s~~~d~~i~~~~~~~~~~~ 121 (340)
T 4aow_A 52 DMILSASRDKTIIMWKLTRDET---------NYGIPQRALRGHSHFVSDVVISSDGQFA-LSGSWDGTLRLWDLTTGTTT 121 (340)
T ss_dssp TEEEEEETTSCEEEEEECCSSS---------CSEEEEEEECCCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTTEEE
T ss_pred CEEEEEcCCCeEEEEECCCCCc---------ccceeeEEEeCCCCCEEEEEECCCCCEE-EEEcccccceEEeeccccee
Confidence 5889999999999999 32211 112234444 377899999999999987 56778889999988753221
Q ss_pred eeeeccC-------------------------------------------ceEEEEEee------------cCC------
Q psy2085 82 FERCFDS-------------------------------------------EVVTFEILS------------DDY------ 100 (358)
Q Consensus 82 ~~r~~d~-------------------------------------------e~v~f~~LS------------~D~------ 100 (358)
....... ..+....++ .|.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d 201 (340)
T 4aow_A 122 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 201 (340)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEE
T ss_pred eeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEE
Confidence 1100000 000001111 111
Q ss_pred -------------CCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccc------cc---
Q psy2085 101 -------------SSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKE------GK--- 158 (358)
Q Consensus 101 -------------s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~------Gt--- 158 (358)
.+.|++|+|+|++++|++|+.||+|++||+++.+++..+..+.......+..++.. |+
T Consensus 202 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~i 281 (340)
T 4aow_A 202 LANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKI 281 (340)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEE
T ss_pred CCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEE
Confidence 16799999999999999999999999999999999988876543222222222110 11
Q ss_pred ------------c----------CCCc-eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 159 ------------A----------SSDE-SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 159 ------------R----------s~~P-~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
. ...+ ++|+|+|+|++|+| .| +|+|||+.+|+
T Consensus 282 wd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 282 WDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 0 0111 78999999999987 46 99999999884
No 10
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.79 E-value=1.6e-17 Score=158.18 Aligned_cols=154 Identities=12% Similarity=0.135 Sum_probs=117.8
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc--e
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS--M 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls--l 80 (358)
.|..++|.|+++..|+.... +.++.+. +...|.+++|+|+|++| ++|+.++.|+|||+.+.. .
T Consensus 68 ~~l~s~s~Dg~v~iWd~~~~-------------~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~d~~v~iw~~~~~~~~~ 133 (340)
T 1got_B 68 RLLLSASQDGKLIIWDSYTT-------------NKVHAIPLRSSWVMTCAYAPSGNYV-ACGGLDNICSIYNLKTREGNV 133 (340)
T ss_dssp SEEEEEETTTEEEEEETTTC-------------CEEEEEECSSSCEEEEEECTTSSEE-EEEETTCEEEEEETTTCSBSC
T ss_pred CEEEEEeCCCcEEEEECCCC-------------CcceEeecCCccEEEEEECCCCCEE-EEEeCCCeEEEEECccCCCcc
Confidence 47889999999999983222 1233333 66789999999999987 677889999999997532 1
Q ss_pred ee----eeeccCceEEEEE---------eecC-------------------CCCCeeEEEEcCCCCEEEEEeCCCeEEEE
Q psy2085 81 KF----ERCFDSEVVTFEI---------LSDD-------------------YSSELNSIAINPVHQLICVGTIEGKVEAW 128 (358)
Q Consensus 81 k~----~r~~d~e~v~f~~---------LS~D-------------------~s~~In~i~~np~~~llasGs~DGtV~iW 128 (358)
+. ..|. . .+..+. .+.| +.+.|++++|+|++.+|++|+.||+|++|
T Consensus 134 ~~~~~~~~h~-~-~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~w 211 (340)
T 1got_B 134 RVSRELAGHT-G-YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW 211 (340)
T ss_dssp EEEEEEECCS-S-CEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeEEEecCCC-c-cEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEE
Confidence 11 1121 1 121111 1122 22679999999999999999999999999
Q ss_pred eCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 129 DPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 129 D~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|++++.++.++.+|...+ .+|+|+|++..|+| .| +|+|||+.+++
T Consensus 212 d~~~~~~~~~~~~h~~~v-----------------~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~ 259 (340)
T 1got_B 212 DVREGMCRQTFTGHESDI-----------------NAICFFPNGNAFATGSDDATCRLFDLRADQ 259 (340)
T ss_dssp ETTTCSEEEEECCCSSCE-----------------EEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred ECCCCeeEEEEcCCcCCE-----------------EEEEEcCCCCEEEEEcCCCcEEEEECCCCc
Confidence 999999999999888777 88999999999997 46 99999999877
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.78 E-value=8.2e-18 Score=162.31 Aligned_cols=155 Identities=8% Similarity=-0.008 Sum_probs=114.3
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..+++.|+++..|+-... ++++.|. |...|++++|+|+|..++++|+.|++|+|||+.+.....
T Consensus 140 ~~l~sgs~d~~i~iwd~~~~-------------~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~ 206 (344)
T 4gqb_B 140 TQAVSGSKDICIKVWDLAQQ-------------VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPAS 206 (344)
T ss_dssp SEEEEEETTSCEEEEETTTT-------------EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEE
T ss_pred CEEEEEeCCCeEEEEECCCC-------------cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceee
Confidence 47889999999999983222 3455564 788999999999998888899999999999998643221
Q ss_pred --eeeccCceEEEEEee-----------cC-------------------CCCCeeEEEEcCCC-CEEEEEeCCCeEEEEe
Q psy2085 83 --ERCFDSEVVTFEILS-----------DD-------------------YSSELNSIAINPVH-QLICVGTIEGKVEAWD 129 (358)
Q Consensus 83 --~r~~d~e~v~f~~LS-----------~D-------------------~s~~In~i~~np~~-~llasGs~DGtV~iWD 129 (358)
..+.....+....++ .| +...|++|+|+|++ .+||+|+.||+|++||
T Consensus 207 ~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd 286 (344)
T 4gqb_B 207 QIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLD 286 (344)
T ss_dssp ECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEEC
T ss_pred eeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEE
Confidence 111111111111111 12 11789999999997 6899999999999999
Q ss_pred CCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEE-EE--ec-ceEEEECCCC
Q psy2085 130 PRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEE-ES--SD-DDQAWTKEIK 189 (358)
Q Consensus 130 ~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~l-lS--aD-~IKIWD~~tG 189 (358)
+++++.+ .+.+|...| ++|+|||++..| +| .| +|++|++.+.
T Consensus 287 ~~~~~~~-~~~~H~~~V-----------------~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 287 SSLSELF-RSQAHRDFV-----------------RDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp TTCCEEE-EECCCSSCE-----------------EEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred CCCCcEE-EEcCCCCCE-----------------EEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 9988754 567888777 889999998754 45 48 9999999865
No 12
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.78 E-value=1.4e-17 Score=163.29 Aligned_cols=154 Identities=16% Similarity=0.131 Sum_probs=111.8
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee-
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK- 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk- 81 (358)
.+..++|.|+++..|+.... ++++.+ .|...|++++|+|+|++| ++|+.|++|++||+.+....
T Consensus 163 ~~l~sgs~D~~i~iwd~~~~-------------~~~~~~~~h~~~V~~v~~~p~~~~l-~s~s~D~~i~~wd~~~~~~~~ 228 (410)
T 1vyh_C 163 KLLASCSADMTIKLWDFQGF-------------ECIRTMHGHDHNVSSVSIMPNGDHI-VSASRDKTIKMWEVQTGYCVK 228 (410)
T ss_dssp SEEEEEETTSCCCEEETTSS-------------CEEECCCCCSSCEEEEEECSSSSEE-EEEETTSEEEEEETTTCCEEE
T ss_pred CEEEEEeCCCeEEEEeCCCC-------------ceeEEEcCCCCCEEEEEEeCCCCEE-EEEeCCCeEEEEECCCCcEEE
Confidence 47889999999999983221 234444 367889999999999987 57789999999999865321
Q ss_pred -eeeeccCceEEEEEeec----------C-------------------CCCCeeEEEEcCC-------------------
Q psy2085 82 -FERCFDSEVVTFEILSD----------D-------------------YSSELNSIAINPV------------------- 112 (358)
Q Consensus 82 -~~r~~d~e~v~f~~LS~----------D-------------------~s~~In~i~~np~------------------- 112 (358)
+..|. ..+....+++ | +...|++++|+|+
T Consensus 229 ~~~~h~--~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (410)
T 1vyh_C 229 TFTGHR--EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGK 306 (410)
T ss_dssp EEECCS--SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC------
T ss_pred EEeCCC--ccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCC
Confidence 22221 1111111111 1 1156788888875
Q ss_pred -CCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCC
Q psy2085 113 -HQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEI 188 (358)
Q Consensus 113 -~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~t 188 (358)
+.+|++|+.||+|++||++++.++.++.+|...+ .+|.|+|+|.+|+| .| +|+|||..+
T Consensus 307 ~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v-----------------~~v~~~~~g~~l~s~s~D~~i~vwd~~~ 369 (410)
T 1vyh_C 307 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV-----------------RGVLFHSGGKFILSCADDKTLRVWDYKN 369 (410)
T ss_dssp -CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCE-----------------EEEEECSSSSCEEEEETTTEEEEECCTT
T ss_pred CCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcE-----------------EEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 5578888888888888888888888887777665 78999999999997 46 999999988
Q ss_pred Cc
Q psy2085 189 KK 190 (358)
Q Consensus 189 G~ 190 (358)
++
T Consensus 370 ~~ 371 (410)
T 1vyh_C 370 KR 371 (410)
T ss_dssp SC
T ss_pred Cc
Confidence 77
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.78 E-value=3e-17 Score=155.13 Aligned_cols=163 Identities=12% Similarity=0.152 Sum_probs=103.4
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+..++|.|+++..|. ..... .--..++.| .|...|++++|+|||++| +||+.|++|+|||+.+....
T Consensus 31 ~~l~s~s~D~~v~~W~~~~~~~---------~~~~~~~~~~~h~~~v~~~~~s~dg~~l-~s~s~D~~v~~wd~~~~~~~ 100 (319)
T 3frx_A 31 NLLLSASRDKTLISWKLTGDDQ---------KFGVPVRSFKGHSHIVQDCTLTADGAYA-LSASWDKTLRLWDVATGETY 100 (319)
T ss_dssp TEEEEEETTSEEEEEEEEEETT---------EEEEEEEEEECCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTTEEE
T ss_pred cEEEEecCCccEEEecCCCCCc---------cccccceEEeCCcccEEEEEECCCCCEE-EEEeCCCEEEEEECCCCCee
Confidence 5789999999999999 32110 011234455 378899999999999987 57789999999999875321
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeC--------CCCcc-------
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDC--------AFNCI------- 146 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~--------~~~~v------- 146 (358)
. .. ..+...|++++|+|++.+|++|+.||+|++||++.+ ++.++.+ ...+.
T Consensus 101 ~--~~-----------~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~ 166 (319)
T 3frx_A 101 Q--RF-----------VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ-CLATLLGHNDWVSQVRVVPNEKADDDS 166 (319)
T ss_dssp E--EE-----------ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC-EEEEECCCSSCEEEEEECCC------C
T ss_pred E--EE-----------ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eEEEEeccCCcEEEEEEccCCCCCCCc
Confidence 1 00 112256777777777777777777777777777533 3322210 00000
Q ss_pred --ccccCCCccc-------cc------cCCCc-eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 147 --SNERDTEEKE-------GK------ASSDE-SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 147 --~~~~~i~gl~-------Gt------Rs~~P-~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
-...+.++.. +. .+..+ .+++|+|+|++|+| .| +|+|||+.+++
T Consensus 167 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 167 VTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred cEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 0000001100 00 11112 88999999999997 46 99999999887
No 14
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.77 E-value=1.8e-17 Score=159.68 Aligned_cols=154 Identities=7% Similarity=0.016 Sum_probs=112.2
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..+++.++++..|+...+ ++++.|. |...|++|+|+|++..++++|+.+++|+|||+.+.....
T Consensus 152 ~~l~sgs~dg~v~iwd~~~~-------------~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~ 218 (357)
T 4g56_B 152 TQAVSGGKDFSVKVWDLSQK-------------AVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPAT 218 (357)
T ss_dssp SEEEEEETTSCEEEEETTTT-------------EEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBC
T ss_pred CEEEEEeCCCeEEEEECCCC-------------cEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceee
Confidence 47889999999999983222 2444554 778899999999998777888899999999997643221
Q ss_pred e--eeccCceEEEEEeecC-----------CC-------------------CCeeEEEEcCCC-CEEEEEeCCCeEEEEe
Q psy2085 83 E--RCFDSEVVTFEILSDD-----------YS-------------------SELNSIAINPVH-QLICVGTIEGKVEAWD 129 (358)
Q Consensus 83 ~--r~~d~e~v~f~~LS~D-----------~s-------------------~~In~i~~np~~-~llasGs~DGtV~iWD 129 (358)
. .+.....+....++|+ .. ..|++|+|+|++ .+||+|+.||+|++||
T Consensus 219 ~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd 298 (357)
T 4g56_B 219 RIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLD 298 (357)
T ss_dssp BCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEEC
T ss_pred eeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEE
Confidence 1 1111111222222222 11 679999999986 5899999999999999
Q ss_pred CCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcC-CCCEEEE--ec-ceEEEECCC
Q psy2085 130 PRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEE-EEEEEES--SD-DDQAWTKEI 188 (358)
Q Consensus 130 ~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~-d~~~llS--aD-~IKIWD~~t 188 (358)
+++++.+..+ +|...| ++|+||| ++.+|+| .| +|+|||+.+
T Consensus 299 ~~~~~~~~~~-~H~~~V-----------------~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 299 ADFSEVFRDL-SHRDFV-----------------TGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp TTSCEEEEEC-CCSSCE-----------------EEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred CCCCcEeEEC-CCCCCE-----------------EEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 9998877665 576666 8899998 7888886 47 999999865
No 15
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.76 E-value=2.2e-17 Score=158.68 Aligned_cols=139 Identities=19% Similarity=0.210 Sum_probs=112.7
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.+.++++.|+.+..|+-... ++++.|. |...|++++|+|+|++| ++|+.|++|+|||+.......
T Consensus 211 ~~l~sgs~Dg~v~~wd~~~~-------------~~~~~~~~h~~~v~~v~~~p~~~~l-~s~s~D~~v~lwd~~~~~~~~ 276 (354)
T 2pbi_B 211 NTFVSGGCDKKAMVWDMRSG-------------QCVQAFETHESDVNSVRYYPSGDAF-ASGSDDATCRLYDLRADREVA 276 (354)
T ss_dssp CEEEEEETTSCEEEEETTTC-------------CEEEEECCCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTTEEEE
T ss_pred CEEEEEeCCCeEEEEECCCC-------------cEEEEecCCCCCeEEEEEeCCCCEE-EEEeCCCeEEEEECCCCcEEE
Confidence 47899999999999993222 2344554 77889999999999976 678899999999998642110
Q ss_pred eeeccCceEEEEEee-cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCC
Q psy2085 83 ERCFDSEVVTFEILS-DDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASS 161 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS-~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~ 161 (358)
.+. ......+++++|+|++.+|++|+.||+|++||++++.++..+.+|...+
T Consensus 277 ------------~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v--------------- 329 (354)
T 2pbi_B 277 ------------IYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRV--------------- 329 (354)
T ss_dssp ------------EECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCE---------------
T ss_pred ------------EEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcE---------------
Confidence 111 1111468999999999999999999999999999999999999998877
Q ss_pred CceeeEEcCCCCEEEE--ec-ceEEEE
Q psy2085 162 DESSEEEEEEEEEEES--SD-DDQAWT 185 (358)
Q Consensus 162 ~P~sI~fs~d~~~llS--aD-~IKIWD 185 (358)
.+|+|+|+|++|+| .| +|+||+
T Consensus 330 --~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 330 --STLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp --EEEEECTTSSCEEEEETTSEEEEEC
T ss_pred --EEEEECCCCCEEEEEcCCCCEEecC
Confidence 88999999999997 46 999996
No 16
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.76 E-value=1.5e-17 Score=158.78 Aligned_cols=129 Identities=15% Similarity=0.183 Sum_probs=105.2
Q ss_pred cceeEEEEee-CCC-CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC
Q psy2085 34 RRIELIQDFE-MPG-VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP 111 (358)
Q Consensus 34 ~rIeliqdfe-~~~-~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np 111 (358)
..+++++.+. |+. .|.+++|||||++| +||+.|++|+|||+.+..... ...+...+...|++|+|+|
T Consensus 3 ~~~~~~~~~~~h~~~~v~~l~~sp~g~~l-as~~~D~~i~iw~~~~~~~~~----------~~~~~~~h~~~v~~~~~sp 71 (345)
T 3fm0_A 3 DSLVLLGRVPAHPDSRCWFLAWNPAGTLL-ASCGGDRRIRIWGTEGDSWIC----------KSVLSEGHQRTVRKVAWSP 71 (345)
T ss_dssp -CEEEEEEECCSTTSCEEEEEECTTSSCE-EEEETTSCEEEEEEETTEEEE----------EEEECSSCSSCEEEEEECT
T ss_pred ccEEEeeeecCCCCCcEEEEEECCCCCEE-EEEcCCCeEEEEEcCCCccee----------eeeeccccCCcEEEEEECC
Confidence 3567888885 777 89999999999976 678899999999987643211 1123345557899999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCc--eeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEEC
Q psy2085 112 VHQLICVGTIEGKVEAWDPRMKV--KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTK 186 (358)
Q Consensus 112 ~~~llasGs~DGtV~iWD~Rs~~--~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~ 186 (358)
++++||+|+.||+|++||..++. ++.++.+|...+ .+|+|+|++++|+| .| +|+|||+
T Consensus 72 ~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v-----------------~~v~~sp~~~~l~s~s~D~~v~iwd~ 134 (345)
T 3fm0_A 72 CGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEV-----------------KSVAWAPSGNLLATCSRDKSVWVWEV 134 (345)
T ss_dssp TSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCE-----------------EEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCc-----------------eEEEEeCCCCEEEEEECCCeEEEEEC
Confidence 99999999999999999998774 578888888877 88999999999997 47 9999999
Q ss_pred CCCc
Q psy2085 187 EIKK 190 (358)
Q Consensus 187 ~tG~ 190 (358)
.++.
T Consensus 135 ~~~~ 138 (345)
T 3fm0_A 135 DEED 138 (345)
T ss_dssp CTTS
T ss_pred CCCC
Confidence 8764
No 17
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.76 E-value=3.6e-17 Score=157.64 Aligned_cols=161 Identities=13% Similarity=0.089 Sum_probs=110.4
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeee
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERC 85 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~ 85 (358)
.+.++.++++..|+-..++.+. +.......|...|++|+|+|||++| ++|+.+++|+|||+.+........
T Consensus 108 ~l~~s~dg~v~lWd~~~~~~~~--------~~~~~~~~h~~~V~~v~~spdg~~l-~sgs~dg~v~iwd~~~~~~~~~~~ 178 (357)
T 4g56_B 108 ILVASDSGAVELWEILEKESLL--------VNKFAKYEHDDIVKTLSVFSDGTQA-VSGGKDFSVKVWDLSQKAVLKSYN 178 (357)
T ss_dssp EEEEETTSCEEEC--------C--------CCCEEECCCSSCEEEEEECSSSSEE-EEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEEEECCCEEEEeeccccceeE--------EEeeccCCCCCCEEEEEECCCCCEE-EEEeCCCeEEEEECCCCcEEEEEc
Confidence 4577889999999822221110 1112334678899999999999987 677899999999998754322111
Q ss_pred ccCceEEEEEeec-----------CCC---------------------CCeeEEEEcCC-CCEEEEEeCCCeEEEEeCCC
Q psy2085 86 FDSEVVTFEILSD-----------DYS---------------------SELNSIAINPV-HQLICVGTIEGKVEAWDPRM 132 (358)
Q Consensus 86 ~d~e~v~f~~LS~-----------D~s---------------------~~In~i~~np~-~~llasGs~DGtV~iWD~Rs 132 (358)
.....+....+++ |.+ ..|++|+|+|+ +.+||+|+.||+|++||+++
T Consensus 179 ~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~ 258 (357)
T 4g56_B 179 AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN 258 (357)
T ss_dssp CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC
T ss_pred CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCC
Confidence 1111122222222 211 45888889887 46888888899999999988
Q ss_pred CceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCC-EEEE--ec-ceEEEECCCCcEE
Q psy2085 133 KVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEE-EEES--SD-DDQAWTKEIKKTY 192 (358)
Q Consensus 133 ~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~-~llS--aD-~IKIWD~~tG~~y 192 (358)
++++.++.++...+ ++|+|+|++. +|+| .| +|+|||.++|+.+
T Consensus 259 ~~~~~~~~~~~~~v-----------------~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 259 PDSAQTSAVHSQNI-----------------TGLAYSYHSSPFLASISEDCTVAVLDADFSEVF 305 (357)
T ss_dssp GGGCEEECCCSSCE-----------------EEEEECSSSSCCEEEEETTSCEEEECTTSCEEE
T ss_pred CcEeEEEeccceeE-----------------EEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe
Confidence 88888888877766 8899999875 5765 47 9999999998844
No 18
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.76 E-value=1.9e-17 Score=162.33 Aligned_cols=142 Identities=9% Similarity=0.160 Sum_probs=116.8
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+..++|.|+++..|+ +... +++.+. |...|++++|+|+|++| ++|+.|++|+|||+.+....
T Consensus 121 ~~l~s~s~Dg~i~vwd~~~~~--------------~~~~l~~h~~~V~~v~~~~~~~~l-~sgs~D~~i~iwd~~~~~~~ 185 (410)
T 1vyh_C 121 SVMVSASEDATIKVWDYETGD--------------FERTLKGHTDSVQDISFDHSGKLL-ASCSADMTIKLWDFQGFECI 185 (410)
T ss_dssp SEEEEEESSSCEEEEETTTCC--------------CCEEECCCSSCEEEEEECTTSSEE-EEEETTSCCCEEETTSSCEE
T ss_pred CEEEEEeCCCeEEEEECCCCc--------------EEEEEeccCCcEEEEEEcCCCCEE-EEEeCCCeEEEEeCCCCcee
Confidence 4788999999999999 3221 223333 67889999999999976 67889999999999864321
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCC
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASS 161 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~ 161 (358)
+.. ..+...|++++|+|++.+|++|+.||+|++||++++.++.++.+|...+
T Consensus 186 --~~~-----------~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v--------------- 237 (410)
T 1vyh_C 186 --RTM-----------HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV--------------- 237 (410)
T ss_dssp --ECC-----------CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE---------------
T ss_pred --EEE-----------cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccE---------------
Confidence 111 1233689999999999999999999999999999999999999988776
Q ss_pred CceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 162 DESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 162 ~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
..+.|+|++.+|+| .| +|+|||+.+++
T Consensus 238 --~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~ 267 (410)
T 1vyh_C 238 --RMVRPNQDGTLIASCSNDQTVRVWVVATKE 267 (410)
T ss_dssp --EEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred --EEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 78999999999997 47 99999999887
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.76 E-value=2.7e-17 Score=156.17 Aligned_cols=150 Identities=15% Similarity=0.173 Sum_probs=111.1
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc--
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS-- 79 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls-- 79 (358)
.+..++|.|+++..|+ +.... -....++++.+. |...|++++|+|||++| +||+.|++|+|||+.+..
T Consensus 71 ~~las~s~D~~v~iw~~~~~~~-------~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l-as~s~D~~v~iwd~~~~~~~ 142 (330)
T 2hes_X 71 SLLAAGSFDSTVSIWAKEESAD-------RTFEMDLLAIIEGHENEVKGVAWSNDGYYL-ATCSRDKSVWIWETDESGEE 142 (330)
T ss_dssp SEEEEEETTSCEEEEEC--------------CCCEEEEEEC----CEEEEEECTTSCEE-EEEETTSCEEEEECCTTCCC
T ss_pred CEEEEEeCCCcEEEEEcccCcC-------ccccceeEEEEcCCCCcEEEEEECCCCCEE-EEEeCCCEEEEEeccCCCCC
Confidence 4678999999999998 32110 001234555554 78899999999999987 678899999999995321
Q ss_pred eeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCC--ceeEEEeCCCCccccccCCCcccc
Q psy2085 80 MKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMK--VKAGTLDCAFNCISNERDTEEKEG 157 (358)
Q Consensus 80 lk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~--~~i~~L~~~~~~v~~~~~i~gl~G 157 (358)
.++.. .+ ..+...|++|+|+|++.+|++|+.||+|++||++++ .++.++.+|...+
T Consensus 143 ~~~~~----------~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v----------- 200 (330)
T 2hes_X 143 YECIS----------VL-QEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTV----------- 200 (330)
T ss_dssp CEEEE----------EE-CCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCE-----------
T ss_pred eEEEE----------Ee-ccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcE-----------
Confidence 11111 11 233468999999999999999999999999999877 6788999888877
Q ss_pred ccCCCceeeEEcCC--CCEEEE--ec-ceEEEECCCC
Q psy2085 158 KASSDESSEEEEEE--EEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 158 tRs~~P~sI~fs~d--~~~llS--aD-~IKIWD~~tG 189 (358)
.++.|+|+ +..|+| .| +|+|||+.++
T Consensus 201 ------~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 201 ------WSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp ------EEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred ------EEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 88999998 667876 47 9999998754
No 20
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.76 E-value=3.1e-17 Score=155.81 Aligned_cols=123 Identities=9% Similarity=0.020 Sum_probs=99.0
Q ss_pred EEEEee--CCCCEeEEEEcC--CCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC
Q psy2085 38 LIQDFE--MPGVSTSVRISP--DGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH 113 (358)
Q Consensus 38 liqdfe--~~~~v~~v~~Sp--DG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~ 113 (358)
+++.+. +.+.|.+++|+| +|++| ++|+.|++|++||+.+..... .........|++++|+|++
T Consensus 116 ~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~s~dg~i~~wd~~~~~~~~------------~~~~~~~~~i~~~~~~pdg 182 (343)
T 3lrv_A 116 VLREIEVDSANEIIYMYGHNEVNTEYF-IWADNRGTIGFQSYEDDSQYI------------VHSAKSDVEYSSGVLHKDS 182 (343)
T ss_dssp EEEEEECCCSSCEEEEECCC---CCEE-EEEETTCCEEEEESSSSCEEE------------EECCCSSCCCCEEEECTTS
T ss_pred eeEEeecCCCCCEEEEEcCCCCCCCEE-EEEeCCCcEEEEECCCCcEEE------------EEecCCCCceEEEEECCCC
Confidence 344554 446799999999 99987 577889999999998654311 1111112469999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCcee-EEEeC-CCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCCC
Q psy2085 114 QLICVGTIEGKVEAWDPRMKVKA-GTLDC-AFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEIK 189 (358)
Q Consensus 114 ~llasGs~DGtV~iWD~Rs~~~i-~~L~~-~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~tG 189 (358)
.+||+|+.||+|++||+++++.+ .++.. |..++ .+|+|+|+|.+|++ +| +|+|||++++
T Consensus 183 ~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v-----------------~~l~fs~~g~~l~s~~~~~v~iwd~~~~ 245 (343)
T 3lrv_A 183 LLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKI-----------------KEVKFADNGYWMVVECDQTVVCFDLRKD 245 (343)
T ss_dssp CEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCE-----------------EEEEECTTSSEEEEEESSBEEEEETTSS
T ss_pred CEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCE-----------------EEEEEeCCCCEEEEEeCCeEEEEEcCCC
Confidence 99999999999999999999988 88887 77776 88999999999997 57 9999999987
Q ss_pred c
Q psy2085 190 K 190 (358)
Q Consensus 190 ~ 190 (358)
+
T Consensus 246 ~ 246 (343)
T 3lrv_A 246 V 246 (343)
T ss_dssp T
T ss_pred C
Confidence 6
No 21
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.76 E-value=2.6e-17 Score=159.27 Aligned_cols=147 Identities=18% Similarity=0.186 Sum_probs=113.2
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+..+++.|+++..|+ ....+ .++.+ .|.+.|++|+|+|||++| +||+.|++|+|||+.+....
T Consensus 219 ~~l~sgs~D~~v~~wd~~~~~~-------------~~~~~~~h~~~v~~v~~~p~~~~l-~s~s~D~~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 219 NMFISGSCDTTVRLWDLRITSR-------------AVRTYHGHEGDINSVKFFPDGQRF-GTGSDDGTCRLFDMRTGHQL 284 (380)
T ss_dssp CEEEEEETTSCEEEEETTTTCC-------------CCEEECCCSSCCCEEEECTTSSEE-EEECSSSCEEEEETTTTEEE
T ss_pred CEEEEEECCCeEEEEECCCCCc-------------ceEEECCcCCCeEEEEEecCCCeE-EEEcCCCeEEEEECCCCcEE
Confidence 4778999999999999 33221 22333 477889999999999976 67889999999999875321
Q ss_pred e--eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE----eCCCCccccccCCCcc
Q psy2085 82 F--ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTL----DCAFNCISNERDTEEK 155 (358)
Q Consensus 82 ~--~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L----~~~~~~v~~~~~i~gl 155 (358)
. ..+.+. .+.....|++++|+|++.+|++|+.||+|++||+.+++.+..+ .+|...|
T Consensus 285 ~~~~~~~~~--------~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v--------- 347 (380)
T 3iz6_a 285 QVYNREPDR--------NDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRI--------- 347 (380)
T ss_dssp EEECCCCSS--------SCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCC---------
T ss_pred EEecccccc--------cccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCce---------
Confidence 1 111100 0111145899999999999999999999999999999988877 4565555
Q ss_pred ccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCC
Q psy2085 156 EGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 156 ~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG 189 (358)
.+|+|+|+|.+|+| .| +|+|||+..+
T Consensus 348 --------~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 348 --------SCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp --------CEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred --------EEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 78999999999997 47 9999999764
No 22
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.76 E-value=4.6e-17 Score=154.58 Aligned_cols=150 Identities=12% Similarity=0.144 Sum_probs=108.4
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe--e-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF--E-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf--e-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
+..+++.|+++..|+-... ...+++.+ . |...|++|+|+|+|++| ++|+.|++|+|||+......
T Consensus 26 ~las~~~D~~i~lw~~~~~-----------~~~~~~~~~~~~h~~~v~~v~~sp~~~~l-as~s~D~~v~iw~~~~~~~~ 93 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYD-----------DFTLIDVLDETAHKKAIRSVAWRPHTSLL-AAGSFDSTVSIWAKEESADR 93 (330)
T ss_dssp EEEEEESSSCEEEEECSSS-----------CCEEEEEECTTCCCSCEEEEEECTTSSEE-EEEETTSCEEEEEC------
T ss_pred EEEEEcCCCEEEEEEecCC-----------CeEEEEEEecCCccCCEEEEEECCCCCEE-EEEeCCCcEEEEEcccCcCc
Confidence 6788999999999983211 11334444 2 77899999999999976 67889999999998642100
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCC----ceeEEEeCCCCccccccCCCcccc
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMK----VKAGTLDCAFNCISNERDTEEKEG 157 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~----~~i~~L~~~~~~v~~~~~i~gl~G 157 (358)
...... ...+ ..+...|++|+|+|++++||+|+.||+|++||++.. +++.++.+|...+
T Consensus 94 ---~~~~~~--~~~~-~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v----------- 156 (330)
T 2hes_X 94 ---TFEMDL--LAII-EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDV----------- 156 (330)
T ss_dssp ----CCCEE--EEEE-C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCE-----------
T ss_pred ---ccccee--EEEE-cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCce-----------
Confidence 000000 0111 234478999999999999999999999999999532 4577888887776
Q ss_pred ccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCC
Q psy2085 158 KASSDESSEEEEEEEEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 158 tRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG 189 (358)
.+|.|+|++.+|+| .| +|+|||..++
T Consensus 157 ------~~v~~~p~~~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 157 ------KHVIWHPSEALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp ------EEEEECSSSSEEEEEETTSCEEEEEEETT
T ss_pred ------EEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 88999999999997 47 9999998776
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.76 E-value=2.8e-17 Score=156.94 Aligned_cols=148 Identities=11% Similarity=0.100 Sum_probs=112.6
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.+..+++.|+++..|+ +.... .......-.|...|++++|||||++| ++|+.|++|+|||+.....++
T Consensus 29 ~~las~~~D~~i~iw~~~~~~~----------~~~~~~~~~h~~~v~~~~~sp~g~~l-~s~s~D~~v~iw~~~~~~~~~ 97 (345)
T 3fm0_A 29 TLLASCGGDRRIRIWGTEGDSW----------ICKSVLSEGHQRTVRKVAWSPCGNYL-ASASFDATTCIWKKNQDDFEC 97 (345)
T ss_dssp SCEEEEETTSCEEEEEEETTEE----------EEEEEECSSCSSCEEEEEECTTSSEE-EEEETTSCEEEEEECCC-EEE
T ss_pred CEEEEEcCCCeEEEEEcCCCcc----------eeeeeeccccCCcEEEEEECCCCCEE-EEEECCCcEEEEEccCCCeEE
Confidence 4677899999999998 32210 00111112477899999999999987 678899999999987654322
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc---eeEEEeCCCCccccccCCCcccccc
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKV---KAGTLDCAFNCISNERDTEEKEGKA 159 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~---~i~~L~~~~~~v~~~~~i~gl~GtR 159 (358)
...+ ..+...|++|+|+|++++|++|+.||+|++||++++. ++..+..|...+
T Consensus 98 ~~~~-----------~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v------------- 153 (345)
T 3fm0_A 98 VTTL-----------EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDV------------- 153 (345)
T ss_dssp EEEE-----------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCE-------------
T ss_pred EEEc-----------cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCe-------------
Confidence 1111 2334789999999999999999999999999998774 456777777766
Q ss_pred CCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 160 SSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 160 s~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.++.|+|++.+|++ .| +|+|||..+++
T Consensus 154 ----~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~ 183 (345)
T 3fm0_A 154 ----KHVVWHPSQELLASASYDDTVKLYREEEDD 183 (345)
T ss_dssp ----EEEEECSSSSCEEEEETTSCEEEEEEETTE
T ss_pred ----EEEEECCCCCEEEEEeCCCcEEEEEecCCC
Confidence 78999999999987 46 99999998765
No 24
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.75 E-value=1.1e-16 Score=147.30 Aligned_cols=63 Identities=14% Similarity=0.199 Sum_probs=46.1
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS 79 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls 79 (358)
++.++.|+++..|+...+ +.+.+++--.|...|++|+|+|+|++| +||+.|++|+|||+.+..
T Consensus 38 ~lAvg~D~tV~iWd~~tg----------~~~~~~~~~~~~~~V~~v~~~~~~~~l-~sgs~Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 38 VLAVALDNSVYLWSASSG----------DILQLLQMEQPGEYISSVAWIKEGNYL-AVGTSSAEVQLWDVQQQK 100 (318)
T ss_dssp EEEEEETTEEEEEETTTC----------CEEEEEECCSTTCCEEEEEECTTSSEE-EEEETTSEEEEEETTTTE
T ss_pred EEEEEeCCEEEEEECCCC----------CEEEEEEecCCCCeEEEEEECCCCCEE-EEEECCCcEEEeecCCce
Confidence 356677899999983322 112333333466789999999999987 678899999999998653
No 25
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.75 E-value=1.3e-16 Score=148.50 Aligned_cols=143 Identities=15% Similarity=0.132 Sum_probs=115.2
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..+++.|+.+..|..... ++++.+ .|...|.+++|+|||++| ++|+.++.|+|||+.+.....
T Consensus 36 ~~l~s~~~dg~i~iw~~~~~-------------~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~d~~i~vwd~~~~~~~~ 101 (312)
T 4ery_A 36 EWLASSSADKLIKIWGAYDG-------------KFEKTISGHKLGISDVAWSSDSNLL-VSASDDKTLKIWDVSSGKCLK 101 (312)
T ss_dssp SEEEEEETTSCEEEEETTTC-------------CEEEEECCCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTCCEEE
T ss_pred CEEEEeeCCCeEEEEeCCCc-------------ccchhhccCCCceEEEEEcCCCCEE-EEECCCCEEEEEECCCCcEEE
Confidence 46788899999999983211 122333 477889999999999977 567789999999998653211
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSD 162 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~ 162 (358)
.. ..+...|.+++|+|++++|++|+.||+|++||+++++++..+..|..++
T Consensus 102 --~~-----------~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v---------------- 152 (312)
T 4ery_A 102 --TL-----------KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV---------------- 152 (312)
T ss_dssp --EE-----------ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE----------------
T ss_pred --EE-----------cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcE----------------
Confidence 10 1223679999999999999999999999999999999999998887776
Q ss_pred ceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 163 ESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 163 P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.++.|+|++.+|++ .| .|+|||+.+++
T Consensus 153 -~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~ 182 (312)
T 4ery_A 153 -SAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 182 (312)
T ss_dssp -EEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred -EEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 78999999999986 46 99999999887
No 26
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.75 E-value=4.1e-16 Score=148.32 Aligned_cols=108 Identities=11% Similarity=0.096 Sum_probs=73.7
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.+..++|.|+++..|+-....... ..-.++..+ .|...|++++|+|+|.+| +||+.|++|+|||+.+.....
T Consensus 40 ~~l~sgs~D~~v~iWd~~~~~~~~------~~~~~~~~l~~h~~~V~~~~~~~~~~~l-~s~s~D~~v~lwd~~~~~~~~ 112 (343)
T 2xzm_R 40 PVLISGSRDKTVMIWKLYEEEQNG------YFGIPHKALTGHNHFVSDLALSQENCFA-ISSSWDKTLRLWDLRTGTTYK 112 (343)
T ss_dssp CEEEEEETTSCEEEEEECSSCCSS------BSEEEEEEECCCSSCEEEEEECSSTTEE-EEEETTSEEEEEETTSSCEEE
T ss_pred CEEEEEcCCCEEEEEECCcCCccc------ccccccchhccCCCceEEEEECCCCCEE-EEEcCCCcEEEEECCCCcEEE
Confidence 478999999999999932111100 011233444 478899999999999976 578899999999998653211
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPR 131 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~R 131 (358)
. . ..+...|++|+|+|++.+|++|+.||+|++||++
T Consensus 113 ~--~-----------~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 113 R--F-----------VGHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp E--E-----------ECCCSCEEEEEECSSTTEEEEEETTSCEEEEESS
T ss_pred E--E-----------cCCCCcEEEEEECCCCCEEEEEcCCCEEEEEecc
Confidence 0 0 1122567777777777777777777777777765
No 27
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.74 E-value=1.8e-16 Score=165.18 Aligned_cols=158 Identities=15% Similarity=0.131 Sum_probs=113.9
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+..++|.|+++..|. ...... + -...+.+ .|...|++|+|||||++| +||+.|++|+|||+.+....
T Consensus 396 ~~l~s~s~D~~i~~W~~~~~~~~------~---~~~~~~~~~h~~~v~~v~~s~~g~~l-~sgs~Dg~v~vwd~~~~~~~ 465 (694)
T 3dm0_A 396 DIIVSASRDKSIILWKLTKDDKA------Y---GVAQRRLTGHSHFVEDVVLSSDGQFA-LSGSWDGELRLWDLAAGVST 465 (694)
T ss_dssp SEEEEEETTSEEEEEECCCSTTC------S---CEEEEEEECCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTTEEE
T ss_pred CEEEEEeCCCcEEEEEccCCCcc------c---ccccceecCCCCcEEEEEECCCCCEE-EEEeCCCcEEEEECCCCcce
Confidence 4788999999999998 322111 0 0122233 488899999999999987 67889999999999875332
Q ss_pred --eeeeccCceEEEEEeecCCC--------------------------------CCeeEEEEcCCC--CEEEEEeCCCeE
Q psy2085 82 --FERCFDSEVVTFEILSDDYS--------------------------------SELNSIAINPVH--QLICVGTIEGKV 125 (358)
Q Consensus 82 --~~r~~d~e~v~f~~LS~D~s--------------------------------~~In~i~~np~~--~llasGs~DGtV 125 (358)
+..|. .. |..+.++++.. ..|++++|+|++ .+|++|+.||+|
T Consensus 466 ~~~~~h~-~~-v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v 543 (694)
T 3dm0_A 466 RRFVGHT-KD-VLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTV 543 (694)
T ss_dssp EEEECCS-SC-EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCE
T ss_pred eEEeCCC-CC-EEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeE
Confidence 22222 22 22222222211 347888888875 578888888888
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
++||+++++++.++.+|...+ .+|+|+|++++|+| .| +|+|||+.+|+
T Consensus 544 ~vwd~~~~~~~~~~~~h~~~v-----------------~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 544 KVWNLSNCKLRSTLAGHTGYV-----------------STVAVSPDGSLCASGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp EEEETTTCCEEEEECCCSSCE-----------------EEEEECTTSSEEEEEETTSBCEEEETTTTE
T ss_pred EEEECCCCcEEEEEcCCCCCE-----------------EEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 888888888888888777666 88999999999997 46 99999999988
No 28
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.74 E-value=1.8e-16 Score=145.67 Aligned_cols=183 Identities=15% Similarity=0.092 Sum_probs=111.1
Q ss_pred ceEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCC--CCEEEEEEecCCeEEEEEcCCCc
Q psy2085 3 VEYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPD--GQYVLSTGIYKPRVRCYETDNLS 79 (358)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpD--G~~LlatG~~d~~IrvwDl~~ls 79 (358)
-.|.++++.|+.+..|+-..... ....++.+++..+. +...|.+++|+|+ |++| ++|+.++.|+|||+.+..
T Consensus 71 ~~~l~s~~~dg~v~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 71 GRIIASASYDKTVKLWEEDPDQE----ECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKL-ACLGNDGILRLYDALEPS 145 (351)
T ss_dssp CSEEEEEETTSCEEEEEECTTSC----TTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEE-EEEETTCEEEEEECSSTT
T ss_pred CCEEEEEcCCCeEEEEecCCCcc----cccccCcceeeeecccCCceeEEEEcCCCCCcEE-EEecCCCcEEEecCCChH
Confidence 35889999999999999322211 11223445666664 7889999999999 9876 567789999999987542
Q ss_pred ee--ee--ee---------ccCceEEE----------------------------------EEeecCCCCCeeEEEEcCC
Q psy2085 80 MK--FE--RC---------FDSEVVTF----------------------------------EILSDDYSSELNSIAINPV 112 (358)
Q Consensus 80 lk--~~--r~---------~d~e~v~f----------------------------------~~LS~D~s~~In~i~~np~ 112 (358)
.. +. .. .....+.. ...-..+...|++++|+|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~ 225 (351)
T 3f3f_A 146 DLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPS 225 (351)
T ss_dssp CTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCC
T ss_pred HhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCC
Confidence 11 00 00 00000000 0011223478999999999
Q ss_pred C----CEEEEEeCCCeEEEEeCCCCceeEEEeCCCCcccc-----c--cCCCcc-c--------------cc-----c-C
Q psy2085 113 H----QLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISN-----E--RDTEEK-E--------------GK-----A-S 160 (358)
Q Consensus 113 ~----~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~-----~--~~i~gl-~--------------Gt-----R-s 160 (358)
+ .+|++|+.||+|++||++++........+...... . ....+. . +. + +
T Consensus 226 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 305 (351)
T 3f3f_A 226 IGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDH 305 (351)
T ss_dssp SSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTT
T ss_pred CCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecc
Confidence 8 89999999999999999886433222111100000 0 000000 0 00 0 1
Q ss_pred CCc-eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 161 SDE-SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 161 ~~P-~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
..+ .+|+|+|++++|+| .| .|+|||+.+++
T Consensus 306 ~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 306 NGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp SSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred cccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 112 89999999999997 46 99999999876
No 29
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.74 E-value=3.3e-17 Score=168.82 Aligned_cols=117 Identities=15% Similarity=0.229 Sum_probs=96.6
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG 123 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG 123 (358)
|...|++++|+|+|.++++||+.|++|++||+.+.. +... + ..|...|++|+|+|++++||+|+.||
T Consensus 146 h~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~--~~~~----------l-~~H~~~V~~v~fspdg~~las~s~D~ 212 (611)
T 1nr0_A 146 QARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK--FKST----------F-GEHTKFVHSVRYNPDGSLFASTGGDG 212 (611)
T ss_dssp CSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE--EEEE----------E-CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe--Eeee----------e-ccccCceEEEEECCCCCEEEEEECCC
Confidence 567889999999988766888899999999976532 1111 1 23447899999999999999999999
Q ss_pred eEEEEeCCCCceeEEEe-------CCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 124 KVEAWDPRMKVKAGTLD-------CAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~-------~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+|++||+++++++..+. +|...+ .+|+|+|+|++|+| .| +|+|||+.+|+
T Consensus 213 ~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V-----------------~~v~~spdg~~l~s~s~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 213 TIVLYNGVDGTKTGVFEDDSLKNVAHSGSV-----------------FGLTWSPDGTKIASASADKTIKIWNVATLK 272 (611)
T ss_dssp CEEEEETTTCCEEEECBCTTSSSCSSSSCE-----------------EEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred cEEEEECCCCcEeeeeccccccccccCCCE-----------------EEEEECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 99999999999988884 566555 88999999999997 47 99999999887
No 30
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.74 E-value=1.7e-16 Score=163.38 Aligned_cols=129 Identities=18% Similarity=0.188 Sum_probs=101.4
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc--eeee-eeccCceEEEEEeecC--------------------
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS--MKFE-RCFDSEVVTFEILSDD-------------------- 99 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls--lk~~-r~~d~e~v~f~~LS~D-------------------- 99 (358)
+|...|++++|||||++| |||+.|++|+|||+.+.. ++.. ..+...+ ....++||
T Consensus 57 ~h~~~v~~~~~spdg~~l-asg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v-~~v~fs~dg~~l~~~~~~~~~~~~v~~w 134 (611)
T 1nr0_A 57 EHSHQTTVAKTSPSGYYC-ASGDVHGNVRIWDTTQTTHILKTTIPVFSGPV-KDISWDSESKRIAAVGEGRERFGHVFLF 134 (611)
T ss_dssp CCSSCEEEEEECTTSSEE-EEEETTSEEEEEESSSTTCCEEEEEECSSSCE-EEEEECTTSCEEEEEECCSSCSEEEEET
T ss_pred CCCCceEEEEECCCCcEE-EEEeCCCCEEEeECCCCcceeeEeecccCCce-EEEEECCCCCEEEEEECCCCceeEEEEe
Confidence 578889999999999987 788899999999986432 2211 1111222 22222222
Q ss_pred -----------CCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeE
Q psy2085 100 -----------YSSELNSIAINPVHQ-LICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEE 167 (358)
Q Consensus 100 -----------~s~~In~i~~np~~~-llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~ 167 (358)
+...|++|+|+|++. +|++|+.||+|++||.++++++.++.+|...+ .+|+
T Consensus 135 d~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V-----------------~~v~ 197 (611)
T 1nr0_A 135 DTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFV-----------------HSVR 197 (611)
T ss_dssp TTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCE-----------------EEEE
T ss_pred eCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCce-----------------EEEE
Confidence 236799999999986 69999999999999999999999999998877 8899
Q ss_pred EcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 168 EEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 168 fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|+|+|++|+| .| +|+|||..+|+
T Consensus 198 fspdg~~las~s~D~~i~lwd~~~g~ 223 (611)
T 1nr0_A 198 YNPDGSLFASTGGDGTIVLYNGVDGT 223 (611)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred ECCCCCEEEEEECCCcEEEEECCCCc
Confidence 9999999997 57 99999998876
No 31
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.74 E-value=9.3e-17 Score=149.98 Aligned_cols=146 Identities=16% Similarity=0.173 Sum_probs=110.5
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCC--CCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPD--GQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpD--G~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.+..++|.|+++..|+....+ .+.+..+ .|...|++++|+|+ |.+| ++|+.|++|+|||+.+...
T Consensus 68 ~~l~s~s~D~~v~iWd~~~~~-----------~~~~~~~~~h~~~v~~v~~~p~~~g~~l-~s~s~d~~v~~wd~~~~~~ 135 (297)
T 2pm7_B 68 TILASCSYDGKVMIWKEENGR-----------WSQIAVHAVHSASVNSVQWAPHEYGPML-LVASSDGKVSVVEFKENGT 135 (297)
T ss_dssp SEEEEEETTTEEEEEEBSSSC-----------BCCCEEECCCSSCEEEEEECCGGGCSEE-EEEETTSEEEEEEBCSSSC
T ss_pred CEEEEEcCCCEEEEEEcCCCc-----------eEEEEEeecCCCceeEEEeCcCCCCcEE-EEEECCCcEEEEEecCCCc
Confidence 578899999999999932221 1122333 37788999999998 8766 6788999999999976421
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCC-------------CCEEEEEeCCCeEEEEeCCCCc----eeEEEeCCC
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPV-------------HQLICVGTIEGKVEAWDPRMKV----KAGTLDCAF 143 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~-------------~~llasGs~DGtV~iWD~Rs~~----~i~~L~~~~ 143 (358)
.. .. .+ ..+...|++++|+|+ +.+||+|+.||+|++||++++. .+.+|.+|.
T Consensus 136 ~~-------~~---~~-~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~ 204 (297)
T 2pm7_B 136 TS-------PI---II-DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS 204 (297)
T ss_dssp BC-------CE---EE-ECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS
T ss_pred ee-------ee---ee-ecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCC
Confidence 00 00 00 123367999999997 4699999999999999998876 567888888
Q ss_pred CccccccCCCccccccCCCceeeEEcCCC---CEEEE--ec-ceEEEECCCC
Q psy2085 144 NCISNERDTEEKEGKASSDESSEEEEEEE---EEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 144 ~~v~~~~~i~gl~GtRs~~P~sI~fs~d~---~~llS--aD-~IKIWD~~tG 189 (358)
..+ .+|+|+|++ .+|+| .| +|+|||..++
T Consensus 205 ~~V-----------------~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 205 DWV-----------------RDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp SCE-----------------EEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred Cce-----------------EEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 777 889999985 67876 47 9999999864
No 32
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.73 E-value=2.6e-16 Score=152.94 Aligned_cols=142 Identities=15% Similarity=0.206 Sum_probs=108.6
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..+++.|+++..|+-... +++..+ .|...|++++|+|||++| ++|+.|++|+|||+.+.....
T Consensus 136 ~~l~s~~~d~~i~iwd~~~~-------------~~~~~~~~h~~~v~~~~~~p~~~~l-~s~s~d~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 136 KFLATGAEDRLIRIWDIENR-------------KIVMILQGHEQDIYSLDYFPSGDKL-VSGSGDRTVRIWDLRTGQCSL 201 (393)
T ss_dssp SEEEEEETTSCEEEEETTTT-------------EEEEEECCCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTTEEEE
T ss_pred CEEEEEcCCCeEEEEECCCC-------------cEEEEEccCCCCEEEEEEcCCCCEE-EEecCCCcEEEEECCCCeeEE
Confidence 46788899999999983222 133344 377889999999999987 577889999999998653211
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEe-------CCCCccccccCCCc
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGTIEGKVEAWDPRMKVKAGTLD-------CAFNCISNERDTEE 154 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs~DGtV~iWD~Rs~~~i~~L~-------~~~~~v~~~~~i~g 154 (358)
. +. +...|.+++|+| ++.+|++|+.||+|++||++++..+..+. +|...+
T Consensus 202 ~------------~~--~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v-------- 259 (393)
T 1erj_A 202 T------------LS--IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSV-------- 259 (393)
T ss_dssp E------------EE--CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCE--------
T ss_pred E------------EE--cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCE--------
Confidence 1 11 115799999999 78999999999999999999999888773 344444
Q ss_pred cccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 155 KEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 155 l~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+|+|+|+|++|+| .| +|+|||+.++.
T Consensus 260 ---------~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~ 289 (393)
T 1erj_A 260 ---------YSVVFTRDGQSVVSGSLDRSVKLWNLQNAN 289 (393)
T ss_dssp ---------EEEEECTTSSEEEEEETTSEEEEEEC----
T ss_pred ---------EEEEECCCCCEEEEEeCCCEEEEEECCCCC
Confidence 88999999999997 47 99999998653
No 33
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.73 E-value=1.7e-16 Score=150.88 Aligned_cols=134 Identities=10% Similarity=0.055 Sum_probs=106.0
Q ss_pred ccccceeEEEEee-CCCCEeEEEE-----cC-CCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCC
Q psy2085 31 DIRRRIELIQDFE-MPGVSTSVRI-----SP-DGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSE 103 (358)
Q Consensus 31 ~~~~rIeliqdfe-~~~~v~~v~~-----Sp-DG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~ 103 (358)
+....+++++.+. |...|++|+| +| ||++| +||+.|++|+|||+.+...... .......+ ..|...
T Consensus 6 ~~~~~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l-~sgs~D~~v~iWd~~~~~~~~~-----~~~~~~~l-~~h~~~ 78 (343)
T 2xzm_R 6 SLDIQVVKRGILEGHSDWVTSIVAGFSQKENEDSPVL-ISGSRDKTVMIWKLYEEEQNGY-----FGIPHKAL-TGHNHF 78 (343)
T ss_dssp CEEEEEEEEEEEECCSSCEEEEEECCCSSTTCCCCEE-EEEETTSCEEEEEECSSCCSSB-----SEEEEEEE-CCCSSC
T ss_pred ccceEeeeeeeeccchhhhhheeeEEEeecCCCCCEE-EEEcCCCEEEEEECCcCCcccc-----cccccchh-ccCCCc
Confidence 3445567777775 8889999999 77 89876 6788999999999975321000 00001111 234478
Q ss_pred eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-c
Q psy2085 104 LNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-D 180 (358)
Q Consensus 104 In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~ 180 (358)
|++++|+|++.+|++|+.||+|++||+++++++.++.+|...+ .+|+|+|++++|+| .| +
T Consensus 79 V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v-----------------~~v~~sp~~~~l~s~~~d~~ 141 (343)
T 2xzm_R 79 VSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEV-----------------YSVAFSPDNRQILSAGAERE 141 (343)
T ss_dssp EEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCE-----------------EEEEECSSTTEEEEEETTSC
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcE-----------------EEEEECCCCCEEEEEcCCCE
Confidence 9999999999999999999999999999999999999998877 88999999999997 47 9
Q ss_pred eEEEECCC
Q psy2085 181 DQAWTKEI 188 (358)
Q Consensus 181 IKIWD~~t 188 (358)
|+|||+..
T Consensus 142 i~~wd~~~ 149 (343)
T 2xzm_R 142 IKLWNILG 149 (343)
T ss_dssp EEEEESSS
T ss_pred EEEEeccC
Confidence 99999874
No 34
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.72 E-value=4.7e-17 Score=159.99 Aligned_cols=157 Identities=9% Similarity=0.088 Sum_probs=99.1
Q ss_pred EEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 5 YCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
+..+++.|+++..|+ .... ...+++...|.+.|++|+|+| ||++| +||+.|++|+|||+....+..
T Consensus 134 ~lasGs~dg~i~lWd~~~~~-----------~~~~~~~~gH~~~V~~l~f~p~~~~~l-~s~s~D~~v~iwd~~~~~~~~ 201 (435)
T 4e54_B 134 TVAVGSKGGDIMLWNFGIKD-----------KPTFIKGIGAGGSITGLKFNPLNTNQF-YASSMEGTTRLQDFKGNILRV 201 (435)
T ss_dssp CEEEEETTSCEEEECSSCCS-----------CCEEECCCSSSCCCCEEEECSSCTTEE-EEECSSSCEEEEETTSCEEEE
T ss_pred EEEEEeCCCEEEEEECCCCC-----------ceeEEEccCCCCCEEEEEEeCCCCCEE-EEEeCCCEEEEeeccCCceeE
Confidence 466888999999998 3221 112233345888999999998 67766 678899999999998654332
Q ss_pred eeeccCce-----EEE-------EEeecC------------------CCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCC
Q psy2085 83 ERCFDSEV-----VTF-------EILSDD------------------YSSELNSIAINPVHQ-LICVGTIEGKVEAWDPR 131 (358)
Q Consensus 83 ~r~~d~e~-----v~f-------~~LS~D------------------~s~~In~i~~np~~~-llasGs~DGtV~iWD~R 131 (358)
....+... +.+ ...+.| +...|++|+|+|++. +|++|+.||+|++||++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~ 281 (435)
T 4e54_B 202 FASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLR 281 (435)
T ss_dssp EECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETT
T ss_pred EeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecc
Confidence 22211110 000 000111 114566666666543 56666666666666666
Q ss_pred CCceeEEE---eCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 132 MKVKAGTL---DCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 132 s~~~i~~L---~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+......+ .+|...| ++|+|+|+|.+|+| .| +|+|||+.+++
T Consensus 282 ~~~~~~~~~~~~~h~~~v-----------------~~~~~spdg~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 282 QVRGKASFLYSLPHRHPV-----------------NAACFSPDGARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp TCCSSSCCSBCCBCSSCE-----------------EECCBCTTSSEEEEEESSSCEEEEESSSSS
T ss_pred cccccceEEEeeeccccc-----------------cceeECCCCCeeEEEcCCCEEEEEECCCCc
Confidence 55443322 2233333 78999999999997 57 99999999887
No 35
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.72 E-value=1.2e-16 Score=155.33 Aligned_cols=136 Identities=19% Similarity=0.258 Sum_probs=104.2
Q ss_pred eeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccC-ce---EEEEE-eecCCCCCeeEEEEc
Q psy2085 36 IELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDS-EV---VTFEI-LSDDYSSELNSIAIN 110 (358)
Q Consensus 36 Ieliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~-e~---v~f~~-LS~D~s~~In~i~~n 110 (358)
+++++.++|...|++++|||||++| |+|+ +++++||++.+......-..+. .. ..... .++.....|++++|+
T Consensus 55 ~~~~~~~~h~~~V~~v~fspdg~~l-a~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s 132 (393)
T 1erj_A 55 VELHKSLDHTSVVCCVKFSNDGEYL-ATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFS 132 (393)
T ss_dssp EEEEEEEECSSCCCEEEECTTSSEE-EEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEEC
T ss_pred ceeEEecCCCCEEEEEEECCCCCEE-EEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEEC
Confidence 4677888999999999999999987 4565 5789999998754321110000 00 00000 011112359999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECC
Q psy2085 111 PVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKE 187 (358)
Q Consensus 111 p~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~ 187 (358)
|++.+||+|+.||+|++||+.+++.+..+.+|...+ .+++|+|++.+|+| .| +|+|||+.
T Consensus 133 ~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v-----------------~~~~~~p~~~~l~s~s~d~~v~iwd~~ 195 (393)
T 1erj_A 133 PDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDI-----------------YSLDYFPSGDKLVSGSGDRTVRIWDLR 195 (393)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-----------------EEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCE-----------------EEEEEcCCCCEEEEecCCCcEEEEECC
Confidence 999999999999999999999999999999998877 88999999999997 46 99999999
Q ss_pred CCc
Q psy2085 188 IKK 190 (358)
Q Consensus 188 tG~ 190 (358)
+|+
T Consensus 196 ~~~ 198 (393)
T 1erj_A 196 TGQ 198 (393)
T ss_dssp TTE
T ss_pred CCe
Confidence 987
No 36
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.72 E-value=2.1e-16 Score=158.65 Aligned_cols=135 Identities=19% Similarity=0.228 Sum_probs=107.7
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..+++.|+++..|+... ++++.+ .|...+++++|||||++| ++|+.++.|+|||.....+
T Consensus 439 ~~l~~~~~d~~v~~w~~~~--------------~~~~~~~~~~~~v~~~~~spd~~~l-as~~~d~~i~iw~~~~~~~-- 501 (577)
T 2ymu_A 439 QTIASASDDKTVKLWNRNG--------------QLLQTLTGHSSSVRGVAFSPDGQTI-ASASDDKTVKLWNRNGQLL-- 501 (577)
T ss_dssp SEEEEEETTSEEEEEETTS--------------CEEEEEECCSSCEEEEEECTTSCEE-EEEETTSEEEEEETTSCEE--
T ss_pred CEEEEEcCCCEEEEEECCC--------------CEEEEEcCCCCCEEEEEEcCCCCEE-EEEeCCCEEEEEcCCCCEE--
Confidence 3667788888898897321 123333 477889999999999987 5778899999999653211
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSD 162 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~ 162 (358)
+.. ..+...|++|+|+|++++||+|+.||+|++||. +++++.++.+|...|
T Consensus 502 -~~~-----------~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v---------------- 552 (577)
T 2ymu_A 502 -QTL-----------TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV---------------- 552 (577)
T ss_dssp -EEE-----------ECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCE----------------
T ss_pred -EEE-----------eCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCE----------------
Confidence 111 123368999999999999999999999999994 788999999998887
Q ss_pred ceeeEEcCCCCEEEE--ec-ceEEEE
Q psy2085 163 ESSEEEEEEEEEEES--SD-DDQAWT 185 (358)
Q Consensus 163 P~sI~fs~d~~~llS--aD-~IKIWD 185 (358)
.+|+|+|||++|+| .| +|+|||
T Consensus 553 -~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 553 -WGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp -EEEEECTTSSCEEEEETTSCEEEEC
T ss_pred -EEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 88999999999997 47 999997
No 37
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.72 E-value=3.7e-16 Score=150.14 Aligned_cols=136 Identities=8% Similarity=0.048 Sum_probs=102.8
Q ss_pred eEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecC----------------
Q psy2085 37 ELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDD---------------- 99 (358)
Q Consensus 37 eliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D---------------- 99 (358)
...+.+. |...|++++|+|||++| +||+.|++|+|||+.+.............+..+.++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l-~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~ 133 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRI-VSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVY 133 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEE-EEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEE
Confidence 3445553 88999999999999976 67889999999998764322111111111111111221
Q ss_pred -------------------CCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccC
Q psy2085 100 -------------------YSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKAS 160 (358)
Q Consensus 100 -------------------~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs 160 (358)
++..|.+++|+|++..|++|+.||+|++||+++++++.++.+|...+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v-------------- 199 (354)
T 2pbi_B 134 PLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADV-------------- 199 (354)
T ss_dssp ECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE--------------
T ss_pred EEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCe--------------
Confidence 23678999999999999999999999999999999999999988776
Q ss_pred CCceeeEEcC--CCCEEEE--ec-ceEEEECCCCc
Q psy2085 161 SDESSEEEEE--EEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 161 ~~P~sI~fs~--d~~~llS--aD-~IKIWD~~tG~ 190 (358)
..+.|+| ++..|+| .| +|++||+.+|+
T Consensus 200 ---~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~ 231 (354)
T 2pbi_B 200 ---LCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ 231 (354)
T ss_dssp ---EEEEECCCSSCCEEEEEETTSCEEEEETTTCC
T ss_pred ---EEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 6788877 4678886 47 99999999988
No 38
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.71 E-value=3.5e-16 Score=150.40 Aligned_cols=151 Identities=5% Similarity=0.045 Sum_probs=104.2
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCC-cee--e
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNL-SMK--F 82 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~l-slk--~ 82 (358)
++.+++++++..|+...+ ++++.++++..|.+++|+|++ ++++ .+++|+|||+.+. ... +
T Consensus 74 ~~~~~~d~~v~iWd~~~~-------------~~~~~~~~~~~v~~v~~~~~~--~~~~--~~~~i~i~d~~~~~~~~~~~ 136 (355)
T 3vu4_A 74 AFVTGVKEVVHIWDDVKK-------------QDVSRIKVDAPVKDLFLSREF--IVVS--YGDVISVFKFGNPWKRITDD 136 (355)
T ss_dssp EEECSSTTEEEEEETTTT-------------EEEEEEECSSCEEEEEECSSE--EEEE--ETTEEEEEESSTTCCBSSCC
T ss_pred EEEECCccEEEEEECCCC-------------cEEEEEECCCceEEEEEcCCE--EEEE--EcCEEEEEECCCCceeeEEe
Confidence 356677788999984333 345566778888888888775 2221 2456666666543 100 0
Q ss_pred e-----------------eeccCceE--EE---------------------EEeecCCCCCeeEEEEcCCCCEEEEEeCC
Q psy2085 83 E-----------------RCFDSEVV--TF---------------------EILSDDYSSELNSIAINPVHQLICVGTIE 122 (358)
Q Consensus 83 ~-----------------r~~d~e~v--~f---------------------~~LS~D~s~~In~i~~np~~~llasGs~D 122 (358)
. ...+..+. +. ...-..|.+.|++|+|+|++.+||+|+.|
T Consensus 137 ~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d 216 (355)
T 3vu4_A 137 IRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQD 216 (355)
T ss_dssp EEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCC
Confidence 0 00000000 00 01113455789999999999999999999
Q ss_pred Ce-EEEEeCCCCceeEEEe-C-CCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 123 GK-VEAWDPRMKVKAGTLD-C-AFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 123 Gt-V~iWD~Rs~~~i~~L~-~-~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|+ |++||+++++++.++. + |...+ .+|+|+|+|++|+| .| +|+|||+.++.
T Consensus 217 ~~~v~iwd~~~~~~~~~~~~g~h~~~v-----------------~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 217 GTIIRVFKTEDGVLVREFRRGLDRADV-----------------VDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp CSEEEEEETTTCCEEEEEECTTCCSCE-----------------EEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CCEEEEEECCCCcEEEEEEcCCCCCcE-----------------EEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 98 9999999999999998 4 66666 88999999999997 46 99999998754
No 39
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.71 E-value=1.6e-15 Score=141.63 Aligned_cols=155 Identities=13% Similarity=0.074 Sum_probs=118.0
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|.++++.++.+..|+-... ++++.+. |...|.+++|+|||++| ++|+.++.|+|||+.+.....
T Consensus 45 ~~l~~~~~dg~i~vwd~~~~-------------~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~ 110 (369)
T 3zwl_B 45 DLLFSCSKDSSASVWYSLNG-------------ERLGTLDGHTGTIWSIDVDCFTKYC-VTGSADYSIKLWDVSNGQCVA 110 (369)
T ss_dssp CEEEEEESSSCEEEEETTTC-------------CEEEEECCCSSCEEEEEECTTSSEE-EEEETTTEEEEEETTTCCEEE
T ss_pred CEEEEEeCCCEEEEEeCCCc-------------hhhhhhhhcCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCcEEE
Confidence 47888899999999982222 2344454 77899999999999987 567789999999998764432
Q ss_pred eeeccCceEEEEEeecCCC-----------------------------------------------CCeeEEEEcCCCCE
Q psy2085 83 ERCFDSEVVTFEILSDDYS-----------------------------------------------SELNSIAINPVHQL 115 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s-----------------------------------------------~~In~i~~np~~~l 115 (358)
.......+ ....++++.. ..|.+++|+|++.+
T Consensus 111 ~~~~~~~v-~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (369)
T 3zwl_B 111 TWKSPVPV-KRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKY 189 (369)
T ss_dssp EEECSSCE-EEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCE
T ss_pred EeecCCCe-EEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCE
Confidence 22222222 1111222110 18999999999999
Q ss_pred EEEEeCCCeEEEEeCCC-CceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 116 ICVGTIEGKVEAWDPRM-KVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 116 lasGs~DGtV~iWD~Rs-~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|++|+.||.|.+||+++ +..+..+..|...+ .++.|+|++.+|++ .| .|+|||+.+++
T Consensus 190 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 251 (369)
T 3zwl_B 190 IIAGHKDGKISKYDVSNNYEYVDSIDLHEKSI-----------------SDMQFSPDLTYFITSSRDTNSFLVDVSTLQ 251 (369)
T ss_dssp EEEEETTSEEEEEETTTTTEEEEEEECCSSCE-----------------EEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EEEEcCCCEEEEEECCCCcEeEEEEecCCCce-----------------eEEEECCCCCEEEEecCCceEEEEECCCCc
Confidence 99999999999999999 77888888887776 78999999999986 46 99999999987
No 40
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.71 E-value=6.5e-16 Score=150.91 Aligned_cols=172 Identities=13% Similarity=0.134 Sum_probs=105.1
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee--e
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF--E 83 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~--~ 83 (358)
.+.|+-|+++..|+...+ +.+.+++--.+...|++|+|||||++| ++|+.|++|+|||+.+..... .
T Consensus 118 ~lAvgld~tV~lWd~~tg----------~~~~~~~~~~~~~~V~sv~fspdg~~l-asgs~Dg~v~iWd~~~~~~~~~~~ 186 (420)
T 4gga_A 118 VLAVALDNSVYLWSASSG----------DILQLLQMEQPGEYISSVAWIKEGNYL-AVGTSSAEVQLWDVQQQKRLRNMT 186 (420)
T ss_dssp EEEEEETTEEEEEETTTC----------CEEEEEECCSTTCCEEEEEECTTSSEE-EEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEEEEeCCEEEEEECCCC----------CEEEEEEecCCCCcEEEEEECCCCCEE-EEEECCCeEEEEEcCCCcEEEEEe
Confidence 356777889999983332 122333333466789999999999987 678899999999998643211 1
Q ss_pred eeccCceEE----------------------------------------EEEeecCCC----------------------
Q psy2085 84 RCFDSEVVT----------------------------------------FEILSDDYS---------------------- 101 (358)
Q Consensus 84 r~~d~e~v~----------------------------------------f~~LS~D~s---------------------- 101 (358)
.|. ..+.. ....+++..
T Consensus 187 ~h~-~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~ 265 (420)
T 4gga_A 187 SHS-ARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG 265 (420)
T ss_dssp CCS-SCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSC
T ss_pred CCC-CceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecccccc
Confidence 110 11100 000111100
Q ss_pred -----------CCeeEEEEcCCC-CEEEEE--eCCCeEEEEeCCCCceeEEEeC-C----------CCc-cccccCCCc-
Q psy2085 102 -----------SELNSIAINPVH-QLICVG--TIEGKVEAWDPRMKVKAGTLDC-A----------FNC-ISNERDTEE- 154 (358)
Q Consensus 102 -----------~~In~i~~np~~-~llasG--s~DGtV~iWD~Rs~~~i~~L~~-~----------~~~-v~~~~~i~g- 154 (358)
..|.+++|+|.+ .++++| +.||+|++||++++.++..+.. . ... +......++
T Consensus 266 ~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~ 345 (420)
T 4gga_A 266 WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQ 345 (420)
T ss_dssp SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCC
T ss_pred ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCE
Confidence 578999999964 566654 5799999999999987765541 1 010 111111111
Q ss_pred cc------cc------cCCCc-eeeEEcCCCCEEEE--ec-ceEEEECCCC
Q psy2085 155 KE------GK------ASSDE-SSEEEEEEEEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 155 l~------Gt------Rs~~P-~sI~fs~d~~~llS--aD-~IKIWD~~tG 189 (358)
+. |. .+..+ .+|+|+|+|++|+| .| +|+|||+.+.
T Consensus 346 I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 346 LVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 10 21 12223 89999999999997 47 9999999753
No 41
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.71 E-value=3.1e-16 Score=151.65 Aligned_cols=153 Identities=12% Similarity=0.112 Sum_probs=114.4
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.+..++++++.+..|. ....+..+ .+..+ .|.+.|++++|+| +|++| ++|+.|++|+|||+.+...
T Consensus 48 ~~~~~~~~~g~i~v~~~~~~~~~~~----------~~~~~~~h~~~V~~~~~~p~~~~~l-~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 48 ALICEASGGGAFLVLPLGKTGRVDK----------NVPLVCGHTAPVLDIAWCPHNDNVI-ASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp EEEBCCSSSCCEEEEETTCCEECCT----------TCCCBCCCSSCEEEEEECTTCTTEE-EEEETTSEEEEEECCTTCC
T ss_pred EEEEEEcCCCEEEEEECccCCCCCC----------CCceEecCCCCEEEEEeCCCCCCEE-EEEeCCCeEEEEEccCCCC
Confidence 3455678899999998 33332211 11222 4778999999999 88765 6788999999999987532
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeEEE--eCCCCccccccCCCcccc
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPVH-QLICVGTIEGKVEAWDPRMKVKAGTL--DCAFNCISNERDTEEKEG 157 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~-~llasGs~DGtV~iWD~Rs~~~i~~L--~~~~~~v~~~~~i~gl~G 157 (358)
... .......+ ..+...|++|+|+|++ .+|++|+.||+|++||+++++++.++ ..|...+
T Consensus 117 ~~~--~~~~~~~~----~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v----------- 179 (402)
T 2aq5_A 117 VLP--LREPVITL----EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTI----------- 179 (402)
T ss_dssp SSC--BCSCSEEE----ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCE-----------
T ss_pred ccc--cCCceEEe----cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCce-----------
Confidence 110 00011111 1233689999999998 69999999999999999999999999 6777666
Q ss_pred ccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 158 KASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 158 tRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+++|+|++.+|++ .| .|+|||+.+++
T Consensus 180 ------~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 209 (402)
T 2aq5_A 180 ------YSVDWSRDGALICTSCRDKRVRVIEPRKGT 209 (402)
T ss_dssp ------EEEEECTTSSCEEEEETTSEEEEEETTTTE
T ss_pred ------EEEEECCCCCEEEEEecCCcEEEEeCCCCc
Confidence 88999999999986 46 99999999987
No 42
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.70 E-value=4.7e-16 Score=144.75 Aligned_cols=123 Identities=14% Similarity=0.195 Sum_probs=102.5
Q ss_pred eEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCE
Q psy2085 37 ELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQL 115 (358)
Q Consensus 37 eliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~l 115 (358)
.+...+ .|...|++++|+|||++| ++|+.++.|+|||+.+.... +.. ..+...|++++|+|++++
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l-~s~~~dg~i~iw~~~~~~~~--~~~-----------~~h~~~v~~~~~~~~~~~ 79 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWL-ASSSADKLIKIWGAYDGKFE--KTI-----------SGHKLGISDVAWSSDSNL 79 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTCCEE--EEE-----------CCCSSCEEEEEECTTSSE
T ss_pred eeEEEEcccCCcEEEEEECCCCCEE-EEeeCCCeEEEEeCCCcccc--hhh-----------ccCCCceEEEEEcCCCCE
Confidence 344444 478899999999999977 67788999999999764321 111 123368999999999999
Q ss_pred EEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 116 ICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 116 lasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|++|+.||+|++||+++++++..+.+|...+ ..+.|+|++++|++ .| +|+|||+.+++
T Consensus 80 l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 140 (312)
T 4ery_A 80 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYV-----------------FCCNFNPQSNLIVSGSFDESVRIWDVKTGK 140 (312)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCE-----------------EEEEECSSSSEEEEEETTSCEEEEETTTCC
T ss_pred EEEECCCCEEEEEECCCCcEEEEEcCCCCCE-----------------EEEEEcCCCCEEEEEeCCCcEEEEECCCCE
Confidence 9999999999999999999999999888776 78999999999997 46 99999999887
No 43
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.70 E-value=2.5e-16 Score=147.09 Aligned_cols=119 Identities=9% Similarity=0.053 Sum_probs=94.6
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC--CCEEEEEe
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV--HQLICVGT 120 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~--~~llasGs 120 (358)
.|.+.|++++|+|||++| +||+.|++|+|||+.....+..+.+ ..|++.|++|+|+|. +.+||||+
T Consensus 7 ~h~~~V~~~~~s~~g~~l-as~s~D~~v~iw~~~~~~~~~~~~l-----------~gH~~~V~~v~~s~~~~g~~l~s~s 74 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRM-ATCSSDKTIKIFEVEGETHKLIDTL-----------TGHEGPVWRVDWAHPKFGTILASCS 74 (297)
T ss_dssp SCSSCEEEEEECTTSSEE-EEEETTSCEEEEEBCSSCBCCCEEE-----------CCCSSCEEEEEECCGGGCSEEEEEE
T ss_pred CCcCceEEEEECCCCCEE-EEEeCCCEEEEEecCCCCcEEEEEE-----------ccccCCeEEEEecCCCcCCEEEEEc
Confidence 478899999999999986 6788999999999975322111111 233478999999864 78999999
Q ss_pred CCCeEEEEeCCCCc--eeEEEeCCCCccccccCCCccccccCCCceeeEEcCC--CCEEEE--ec-ceEEEECCCCc
Q psy2085 121 IEGKVEAWDPRMKV--KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEE--EEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 121 ~DGtV~iWD~Rs~~--~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d--~~~llS--aD-~IKIWD~~tG~ 190 (358)
.||+|++||++++. ++.++.+|...+ .+++|+|+ +.+|++ .| +|+|||+.++.
T Consensus 75 ~D~~v~iWd~~~~~~~~~~~~~~h~~~v-----------------~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 75 YDGKVMIWKEENGRWSQIAVHAVHSASV-----------------NSVQWAPHEYGPMLLVASSDGKVSVVEFKENG 134 (297)
T ss_dssp TTTEEEEEEBSSSCBCCCEEECCCSSCE-----------------EEEEECCGGGCSEEEEEETTSEEEEEEBCSSS
T ss_pred CCCEEEEEEcCCCceEEEEEeecCCCce-----------------eEEEeCcCCCCcEEEEEECCCcEEEEEecCCC
Confidence 99999999999874 567777777766 88999997 788886 46 99999998763
No 44
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.70 E-value=1.2e-15 Score=140.88 Aligned_cols=149 Identities=11% Similarity=0.152 Sum_probs=115.1
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|.++++ ++.+..|+ ...+ ....+..+....+...+.+++|+|||++| ++|+.++.|++||+.+.....
T Consensus 64 ~~l~~~~-dg~i~iw~~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~ 133 (337)
T 1gxr_A 64 RHVYTGG-KGCVKVWDISHPG--------NKSPVSQLDCLNRDNYIRSCKLLPDGCTL-IVGGEASTLSIWDLAAPTPRI 133 (337)
T ss_dssp SEEEEEC-BSEEEEEETTSTT--------CCSCSEEEECSCTTSBEEEEEECTTSSEE-EEEESSSEEEEEECCCC--EE
T ss_pred cEEEEcC-CCeEEEEECCCCC--------ceeeeecccccCCCCcEEEEEEcCCCCEE-EEEcCCCcEEEEECCCCCcce
Confidence 3566666 88999998 3221 11233344444578899999999999987 566789999999998754221
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSD 162 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~ 162 (358)
.... ..+...|++++|+|++++|++|+.||.|.+||+++++.+..+..|...+
T Consensus 134 ~~~~-----------~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i---------------- 186 (337)
T 1gxr_A 134 KAEL-----------TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA---------------- 186 (337)
T ss_dssp EEEE-----------ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE----------------
T ss_pred eeec-----------ccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCce----------------
Confidence 1111 1122679999999999999999999999999999999999998887766
Q ss_pred ceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 163 ESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 163 P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.++.|+|+++.|++ .| .|++||+.+++
T Consensus 187 -~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 216 (337)
T 1gxr_A 187 -SCIDISNDGTKLWTGGLDNTVRSWDLREGR 216 (337)
T ss_dssp -EEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred -EEEEECCCCCEEEEEecCCcEEEEECCCCc
Confidence 78999999999986 46 99999999887
No 45
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.69 E-value=7.5e-16 Score=148.95 Aligned_cols=153 Identities=16% Similarity=0.150 Sum_probs=110.5
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEE-E--eeCCCCEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQ-D--FEMPGVSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliq-d--fe~~~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
+.+++|.|+++..|+-...+ .+..+. . ..|...|.++.|+| ++.+| ++|+.|++|+|||+.....
T Consensus 172 ~l~s~s~D~~i~~wd~~~~~----------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l-~sgs~D~~v~~wd~~~~~~ 240 (380)
T 3iz6_a 172 RLITGSGDQTCVLWDVTTGQ----------RISIFGSEFPSGHTADVLSLSINSLNANMF-ISGSCDTTVRLWDLRITSR 240 (380)
T ss_dssp CEEEECTTSCEEEECTTTCC----------EEEEECCCSSSSCCSCEEEEEECSSSCCEE-EEEETTSCEEEEETTTTCC
T ss_pred EEEEECCCCcEEEEEcCCCc----------EEEEeecccCCCCccCeEEEEeecCCCCEE-EEEECCCeEEEEECCCCCc
Confidence 57899999999999932221 111110 0 13567899999987 67654 7888999999999974211
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCcccc-ccCCCcccccc
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISN-ERDTEEKEGKA 159 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~-~~~i~gl~GtR 159 (358)
. .+.. ..+.+.|++|+|+|++++|++|+.||+|++||++++.++.++..+...... ...+
T Consensus 241 ~-~~~~-----------~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v------- 301 (380)
T 3iz6_a 241 A-VRTY-----------HGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIV------- 301 (380)
T ss_dssp C-CEEE-----------CCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSC-------
T ss_pred c-eEEE-----------CCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCce-------
Confidence 0 0000 123368999999999999999999999999999999999888754321100 0011
Q ss_pred CCCceeeEEcCCCCEEEE--ec-ceEEEECCCCcE
Q psy2085 160 SSDESSEEEEEEEEEEES--SD-DDQAWTKEIKKT 191 (358)
Q Consensus 160 s~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~~ 191 (358)
.+++|+|+|++|++ .| .|+|||..+++.
T Consensus 302 ----~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~ 332 (380)
T 3iz6_a 302 ----TSVAFSISGRLLFAGYSNGDCYVWDTLLAEM 332 (380)
T ss_dssp ----SEEEECSSSSEEEEECTTSCEEEEETTTCCE
T ss_pred ----EEEEECCCCCEEEEEECCCCEEEEECCCCce
Confidence 78999999999997 46 999999988873
No 46
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.69 E-value=2.1e-15 Score=144.01 Aligned_cols=158 Identities=8% Similarity=0.019 Sum_probs=109.2
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..+++.++.+..|+-...+ ....++...|...|.+++|+| ++++| ++|+.++.|+|||+.+..+..
T Consensus 87 ~~l~s~~~dg~i~iwd~~~~~----------~~~~~~~~~h~~~v~~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~ 155 (383)
T 3ei3_B 87 TTVAVGSKGGDIILWDYDVQN----------KTSFIQGMGPGDAITGMKFNQFNTNQL-FVSSIRGATTLRDFSGSVIQV 155 (383)
T ss_dssp TEEEEEEBTSCEEEEETTSTT----------CEEEECCCSTTCBEEEEEEETTEEEEE-EEEETTTEEEEEETTSCEEEE
T ss_pred CEEEEEcCCCeEEEEeCCCcc----------cceeeecCCcCCceeEEEeCCCCCCEE-EEEeCCCEEEEEECCCCceEE
Confidence 478899999999999932211 112222235888999999999 56655 678899999999998643322
Q ss_pred eeecc--CceEEEEEeecC----------------------------CCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCC
Q psy2085 83 ERCFD--SEVVTFEILSDD----------------------------YSSELNSIAINPVHQ-LICVGTIEGKVEAWDPR 131 (358)
Q Consensus 83 ~r~~d--~e~v~f~~LS~D----------------------------~s~~In~i~~np~~~-llasGs~DGtV~iWD~R 131 (358)
..... ...+....++++ +...|++++|+|++. +|++|+.||+|++||++
T Consensus 156 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 235 (383)
T 3ei3_B 156 FAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLR 235 (383)
T ss_dssp EECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGG
T ss_pred EeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCC
Confidence 21111 011222222222 226788888888877 88888888888888888
Q ss_pred C----CceeEEEeCCCCccccccCCCccccccCCCceeeEEcC-CCCEEEE--ec-ceEEEECCCCc
Q psy2085 132 M----KVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEE-EEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 132 s----~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~-d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+ +.++..+ .|...+ .+|+|+| ++.+|++ .| .|+|||+.+++
T Consensus 236 ~~~~~~~~~~~~-~~~~~v-----------------~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 236 NIKDKNSYIAEM-PHEKPV-----------------NAAYFNPTDSTKLLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp GCCSTTCEEEEE-ECSSCE-----------------EEEEECTTTSCEEEEEESSSEEEEEETTBTT
T ss_pred CCCcccceEEEe-cCCCce-----------------EEEEEcCCCCCEEEEEcCCCcEEEEECCCCc
Confidence 7 5556655 344444 8899999 9999986 46 99999999887
No 47
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.69 E-value=8e-16 Score=150.58 Aligned_cols=144 Identities=11% Similarity=0.012 Sum_probs=98.0
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee----CCCCEeEEEEcCCCCEE-----------EEEEecCC
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE----MPGVSTSVRISPDGQYV-----------LSTGIYKP 68 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe----~~~~v~~v~~SpDG~~L-----------latG~~d~ 68 (358)
++.-|+|.|+++..|+-..+ ++++.|. +...+.+++|||||+++ +++|+.|.
T Consensus 194 ~~LaSgS~D~TIkIWDl~TG-------------k~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~ 260 (356)
T 2w18_A 194 EALLGTTIMNNIVIWNLKTG-------------QLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVF 260 (356)
T ss_dssp TEEEEEETTSEEEEEETTTC-------------CEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCE
T ss_pred ceEEEecCCCcEEEEECCCC-------------cEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCc
Confidence 46678999999999994333 2333343 22467888999999987 36788999
Q ss_pred eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCcccc
Q psy2085 69 RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISN 148 (358)
Q Consensus 69 ~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~ 148 (358)
+|++||+.+.... . +. ...+.+++...+.+.+++ +.++|+|+.||+|++||+++++++.+|.+|...+.
T Consensus 261 tIklWd~~tgk~l--~-----v~-~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vv- 329 (356)
T 2w18_A 261 QLIVINPKTTLSV--G-----VM-LYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHW- 329 (356)
T ss_dssp EEEEEETTTTEEE--E-----EE-EECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCC-
T ss_pred EEEEEECCCCEEE--E-----EE-EeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeE-
Confidence 9999999864221 0 00 000112222333334443 78999999999999999999999999998765431
Q ss_pred ccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEEC
Q psy2085 149 ERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTK 186 (358)
Q Consensus 149 ~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~ 186 (358)
..++|||+|++|+| .| +|||||.
T Consensus 330 ---------------s~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 330 ---------------SFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp ---------------CEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred ---------------EEEEECCCCCEEEEEECCCcEEEecC
Confidence 35899999999997 47 9999995
No 48
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.68 E-value=1.5e-15 Score=146.80 Aligned_cols=151 Identities=15% Similarity=0.126 Sum_probs=115.7
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+.++++.|+.+..|+ .... .... .. +.+..+ .|...|++++|+|+|+.++++|+.++.|+|||+.+....
T Consensus 95 ~~l~s~s~dg~v~vw~~~~~~-~~~~---~~---~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 167 (402)
T 2aq5_A 95 NVIASGSEDCTVMVWEIPDGG-LVLP---LR---EPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAV 167 (402)
T ss_dssp TEEEEEETTSEEEEEECCTTC-CSSC---BC---SCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEE
T ss_pred CEEEEEeCCCeEEEEEccCCC-Cccc---cC---CceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCcc
Confidence 5788999999999999 3321 1110 00 223334 478899999999999655678889999999999865321
Q ss_pred eeeeccCceEEEEEee-cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE-eCCCCc-cccccCCCccccc
Q psy2085 82 FERCFDSEVVTFEILS-DDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTL-DCAFNC-ISNERDTEEKEGK 158 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS-~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L-~~~~~~-v~~~~~i~gl~Gt 158 (358)
. .+. ..+...|++++|+|++.+|++|+.||+|++||+++++.+..+ .+|... +
T Consensus 168 ~------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~------------ 223 (402)
T 2aq5_A 168 L------------TLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRP------------ 223 (402)
T ss_dssp E------------EECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSC------------
T ss_pred E------------EEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcc------------
Confidence 1 111 223368999999999999999999999999999999999888 566543 3
Q ss_pred cCCCceeeEEcCCCCEEEEe-----c-ceEEEECCCCc
Q psy2085 159 ASSDESSEEEEEEEEEEESS-----D-DDQAWTKEIKK 190 (358)
Q Consensus 159 Rs~~P~sI~fs~d~~~llSa-----D-~IKIWD~~tG~ 190 (358)
..+.|+|++.+|+++ | .|+|||..+++
T Consensus 224 -----~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 224 -----VHAVFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp -----CEEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred -----eEEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 679999999988864 6 99999999876
No 49
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.68 E-value=7.6e-16 Score=149.72 Aligned_cols=159 Identities=11% Similarity=-0.003 Sum_probs=118.3
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcC---CCc
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETD---NLS 79 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~---~ls 79 (358)
.|..+++.|+++..|+ ....+. . ..+....+.|...|.+++|+|+|++| ++|+.|++|+|||+. ...
T Consensus 77 ~~l~s~s~dg~v~vwd~~~~~~~----~----~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~dg~i~vwd~~~~~~~~ 147 (437)
T 3gre_A 77 PYLITGSDQGVIKIWNLKEIIVG----E----VYSSSLTYDCSSTVTQITMIPNFDAF-AVSSKDGQIIVLKVNHYQQES 147 (437)
T ss_dssp CEEEEEETTSEEEEEEHHHHHTT----C----CCSCSEEEECSSCEEEEEECTTSSEE-EEEETTSEEEEEEEEEEEETT
T ss_pred CEEEEecCCceEEEeECcccccC----c----ccceeeeccCCCCEEEEEEeCCCCEE-EEEeCCCEEEEEEeccccCCc
Confidence 5889999999999999 321100 0 11223445688999999999999977 577889999999995 221
Q ss_pred eeeeeeccCceEEEEEeecC-CCCCeeEEE--EcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeC--CCCccccccCCCc
Q psy2085 80 MKFERCFDSEVVTFEILSDD-YSSELNSIA--INPVHQLICVGTIEGKVEAWDPRMKVKAGTLDC--AFNCISNERDTEE 154 (358)
Q Consensus 80 lk~~r~~d~e~v~f~~LS~D-~s~~In~i~--~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~--~~~~v~~~~~i~g 154 (358)
. .+......+....++++ ....+.++. ++|++.+|++|+.||+|++||+++++++.++.+ |...+
T Consensus 148 ~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v-------- 217 (437)
T 3gre_A 148 E--VKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAV-------- 217 (437)
T ss_dssp E--EEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCE--------
T ss_pred e--eeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCce--------
Confidence 1 11111112333333442 336788888 668899999999999999999999999999987 55555
Q ss_pred cccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 155 KEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 155 l~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+++|+|++.+|++ .| +|+|||+.+++
T Consensus 218 ---------~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 247 (437)
T 3gre_A 218 ---------SSICIDEECCVLILGTTRGIIDIWDIRFNV 247 (437)
T ss_dssp ---------EEEEECTTSCEEEEEETTSCEEEEETTTTE
T ss_pred ---------EEEEECCCCCEEEEEcCCCeEEEEEcCCcc
Confidence 88999999999997 46 99999999887
No 50
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.68 E-value=3e-16 Score=149.12 Aligned_cols=155 Identities=14% Similarity=0.061 Sum_probs=100.1
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc-e-
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS-M- 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls-l- 80 (358)
.|..+++.++.+..|+.... ..++++.+ .|...|++++|+|||++| ++|+.|++|+|||+.+.. .
T Consensus 24 ~~l~~~~~d~~i~iw~~~~~-----------~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~s~d~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 24 TEFVTTTATNQVELYEQDGN-----------GWKHARTFSDHDKIVTCVDWAPKSNRI-VTCSQDRNAYVYEKRPDGTWK 91 (377)
T ss_dssp SEEECCCSSSCBCEEEEETT-----------EEEECCCBCCCSSCEEEEEECTTTCCE-EEEETTSSEEEC------CCC
T ss_pred CEEEEecCCCEEEEEEccCC-----------ceEEEEEEecCCceEEEEEEeCCCCEE-EEEeCCCeEEEEEcCCCCcee
Confidence 46778889999999993221 01233333 377889999999999977 577889999999998643 1
Q ss_pred ---eeeeeccCceEEEEEeecC---------------------------------CCCCeeEEEEcCCCCEEEEEeCCCe
Q psy2085 81 ---KFERCFDSEVVTFEILSDD---------------------------------YSSELNSIAINPVHQLICVGTIEGK 124 (358)
Q Consensus 81 ---k~~r~~d~e~v~f~~LS~D---------------------------------~s~~In~i~~np~~~llasGs~DGt 124 (358)
.+..|. .. +....++++ +...|++++|+|++++|++|+.||+
T Consensus 92 ~~~~~~~~~-~~-v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~ 169 (377)
T 3dwl_C 92 QTLVLLRLN-RA-ATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRK 169 (377)
T ss_dssp CEEECCCCS-SC-EEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSC
T ss_pred eeeEecccC-Cc-eEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCE
Confidence 111111 11 111111211 2256788888888888888888888
Q ss_pred EEEEeCCC------------------CceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEE
Q psy2085 125 VEAWDPRM------------------KVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQA 183 (358)
Q Consensus 125 V~iWD~Rs------------------~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKI 183 (358)
|++||+++ ++++..+ .|...+ .+++|+|++++|++ .| +|+|
T Consensus 170 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v-----------------~~~~~sp~~~~l~~~~~d~~i~i 231 (377)
T 3dwl_C 170 AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWV-----------------HAVGFSPSGNALAYAGHDSSVTI 231 (377)
T ss_dssp EEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSE-----------------EEEEECTTSSCEEEEETTTEEC-
T ss_pred EEEEEEEecccCCCccccccccccchhhhhhcc-cCCceE-----------------EEEEECCCCCEEEEEeCCCcEEE
Confidence 88888753 3333444 444444 88999999999986 46 9999
Q ss_pred EECCCCc
Q psy2085 184 WTKEIKK 190 (358)
Q Consensus 184 WD~~tG~ 190 (358)
||+.+++
T Consensus 232 wd~~~~~ 238 (377)
T 3dwl_C 232 AYPSAPE 238 (377)
T ss_dssp CEECSTT
T ss_pred EECCCCC
Confidence 9999886
No 51
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.68 E-value=3.4e-16 Score=147.69 Aligned_cols=118 Identities=12% Similarity=0.018 Sum_probs=92.2
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC--CCCEEEEEe
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP--VHQLICVGT 120 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np--~~~llasGs 120 (358)
.|.+.|++++|+|||++| +||+.|++|+|||+.+....... .+ ..|.+.|++|+|+| ++++|++|+
T Consensus 11 ~H~~~V~~v~~s~~g~~l-asgs~D~~v~lwd~~~~~~~~~~----------~l-~gH~~~V~~v~~~~~~~~~~l~s~s 78 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRL-ATCSSDRSVKIFDVRNGGQILIA----------DL-RGHEGPVWQVAWAHPMYGNILASCS 78 (316)
T ss_dssp ---CCEEEEEECGGGCEE-EEEETTTEEEEEEEETTEEEEEE----------EE-ECCSSCEEEEEECCGGGSSCEEEEE
T ss_pred cccCeEEEeeEcCCCCEE-EEEeCCCeEEEEEecCCCcEEEE----------EE-cCCCccEEEEEeCCCCCCCEEEEEE
Confidence 478899999999999976 67889999999999754321111 11 23447899999986 478999999
Q ss_pred CCCeEEEEeCCCCc--eeEEEeCCCCccccccCCCccccccCCCceeeEEcCC--CCEEEE--ec-ceEEEECCCC
Q psy2085 121 IEGKVEAWDPRMKV--KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEE--EEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 121 ~DGtV~iWD~Rs~~--~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d--~~~llS--aD-~IKIWD~~tG 189 (358)
.||+|++||++++. ++.++.+|...+ ++|+|+|+ +.+|+| .| +|+|||..++
T Consensus 79 ~D~~v~iWd~~~~~~~~~~~~~~h~~~V-----------------~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 79 YDRKVIIWREENGTWEKSHEHAGHDSSV-----------------NSVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp TTSCEEEECCSSSCCCEEEEECCCSSCC-----------------CEEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred CCCEEEEEECCCCcceEEEEccCCCCce-----------------EEEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 99999999999874 567777787776 88999998 778887 46 9999999876
No 52
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.68 E-value=2.5e-15 Score=140.39 Aligned_cols=145 Identities=11% Similarity=0.107 Sum_probs=112.1
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee---CCCCEeEEEEcCC----CCEEEEEEecCCeEEEEEcCC
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE---MPGVSTSVRISPD----GQYVLSTGIYKPRVRCYETDN 77 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe---~~~~v~~v~~SpD----G~~LlatG~~d~~IrvwDl~~ 77 (358)
+.+.++++..+..|+-... +.+..++.+. +...|.+++|+|+ |++| ++|+.++.|+|||+.+
T Consensus 36 ~~~~~~~~~~v~vw~~~~~----------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l-~~~~~dg~i~v~d~~~ 104 (366)
T 3k26_A 36 LVFATVGSNRVTLYECHSQ----------GEIRLLQSYVDADADENFYTCAWTYDSNTSHPLL-AVAGSRGIIRIINPIT 104 (366)
T ss_dssp EEEEEEETTEEEEEEECGG----------GCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEE-EEEETTCEEEEECTTT
T ss_pred eEEEECCCCEEEEEEcCCC----------cEEEeeeeccccCCCCcEEEEEeccCCCCCCCEE-EEecCCCEEEEEEchh
Confidence 4566666778888983222 1234455554 5688999999999 5555 6788999999999986
Q ss_pred CceeeeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEE---eCCCCccccccCCC
Q psy2085 78 LSMKFERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGTIEGKVEAWDPRMKVKAGTL---DCAFNCISNERDTE 153 (358)
Q Consensus 78 lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs~DGtV~iWD~Rs~~~i~~L---~~~~~~v~~~~~i~ 153 (358)
...... + ..+...|++++|+| ++.+|++|+.||+|++||+++++.+..+ ..|...+
T Consensus 105 ~~~~~~------------~-~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v------- 164 (366)
T 3k26_A 105 MQCIKH------------Y-VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEV------- 164 (366)
T ss_dssp CCEEEE------------E-ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCE-------
T ss_pred ceEeee------------e-cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCce-------
Confidence 533211 1 12236899999999 8999999999999999999999998888 5566665
Q ss_pred ccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 154 EKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 154 gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.++.|+|++.+|++ .| .|+|||+.+++
T Consensus 165 ----------~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 165 ----------LSADYDLLGEKIMSCGMDHSLKLWRINSKR 194 (366)
T ss_dssp ----------EEEEECTTSSEEEEEETTSCEEEEESCSHH
T ss_pred ----------eEEEECCCCCEEEEecCCCCEEEEECCCCc
Confidence 88999999999997 46 99999999876
No 53
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.68 E-value=1.1e-15 Score=140.24 Aligned_cols=121 Identities=13% Similarity=0.103 Sum_probs=96.8
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC--CCCEEEEEe
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP--VHQLICVGT 120 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np--~~~llasGs 120 (358)
.|.+.|++++|+|||++| ++|+.++.|+|||+.+....+.. ...+ ..+...|++++|+| ++.+|++|+
T Consensus 9 gH~~~v~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~--------~~~~-~~~~~~v~~~~~~~~~d~~~l~s~~ 78 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGRHV-ATCSSDQHIKVFKLDKDTSNWEL--------SDSW-RAHDSSIVAIDWASPEYGRIIASAS 78 (351)
T ss_dssp CCSSCEEEEEECSSSSEE-EEEETTSEEEEEEECSSSCCEEE--------EEEE-ECCSSCEEEEEECCGGGCSEEEEEE
T ss_pred ccccceeEEEEcCCCCEE-EEeeCCCeEEEEECCCCCCccee--------ccee-ccCCCcEEEEEEcCCCCCCEEEEEc
Confidence 478899999999999976 67788999999999864321110 0011 12337899999999 589999999
Q ss_pred CCCeEEEEeCCCC---------ceeEEEeCCCCccccccCCCccccccCCCceeeEEcCC--CCEEEE--ec-ceEEEEC
Q psy2085 121 IEGKVEAWDPRMK---------VKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEE--EEEEES--SD-DDQAWTK 186 (358)
Q Consensus 121 ~DGtV~iWD~Rs~---------~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d--~~~llS--aD-~IKIWD~ 186 (358)
.||+|++||++++ +++..+..|...+ .++.|+|+ +.+|++ .| .|+|||+
T Consensus 79 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~~~l~~~~~dg~v~iwd~ 141 (351)
T 3f3f_A 79 YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSL-----------------YSVKFAPAHLGLKLACLGNDGILRLYDA 141 (351)
T ss_dssp TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCE-----------------EEEEECCGGGCSEEEEEETTCEEEEEEC
T ss_pred CCCeEEEEecCCCcccccccCcceeeeecccCCce-----------------eEEEEcCCCCCcEEEEecCCCcEEEecC
Confidence 9999999999987 5577777777766 88999999 998886 46 9999999
Q ss_pred CCCc
Q psy2085 187 EIKK 190 (358)
Q Consensus 187 ~tG~ 190 (358)
.+++
T Consensus 142 ~~~~ 145 (351)
T 3f3f_A 142 LEPS 145 (351)
T ss_dssp SSTT
T ss_pred CChH
Confidence 8876
No 54
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.68 E-value=2.3e-15 Score=143.44 Aligned_cols=153 Identities=17% Similarity=0.100 Sum_probs=109.5
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee----C---CCCEeEEEEcCCCCEEEEEEecC---CeEEEEE
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE----M---PGVSTSVRISPDGQYVLSTGIYK---PRVRCYE 74 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe----~---~~~v~~v~~SpDG~~LlatG~~d---~~IrvwD 74 (358)
+.++++.++.+..|+-... ++++.+. | ...+.+++|+|+|++|+ +|+.+ +.|+|||
T Consensus 199 ~l~~~~~dg~i~i~d~~~~-------------~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~-~~~~d~~~g~i~i~d 264 (397)
T 1sq9_A 199 LIATGFNNGTVQISELSTL-------------RPLYNFESQHSMINNSNSIRSVKFSPQGSLLA-IAHDSNSFGCITLYE 264 (397)
T ss_dssp EEEEECTTSEEEEEETTTT-------------EEEEEEECCC---CCCCCEEEEEECSSTTEEE-EEEEETTEEEEEEEE
T ss_pred eEEEEeCCCcEEEEECCCC-------------ceeEEEeccccccccCCccceEEECCCCCEEE-EEecCCCCceEEEEE
Confidence 6677888888888883211 2344444 4 78899999999999874 56678 8999999
Q ss_pred cCCCceeeeeeccCceE--EEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEe------CC----
Q psy2085 75 TDNLSMKFERCFDSEVV--TFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLD------CA---- 142 (358)
Q Consensus 75 l~~lslk~~r~~d~e~v--~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~------~~---- 142 (358)
+.+...... ...... ....-.-.+...|++++|+|++.+|++|+.||+|++||+++++++..+. .|
T Consensus 265 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 342 (397)
T 1sq9_A 265 TEFGERIGS--LSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDI 342 (397)
T ss_dssp TTTCCEEEE--ECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGC
T ss_pred CCCCcccce--eccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhh
Confidence 986532211 110000 0000000023689999999999999999999999999999999999998 55
Q ss_pred -----------CCccccccCCCccccccCCCceeeEEcCCC----------CEEEE--ec-ceEEEECCCCc
Q psy2085 143 -----------FNCISNERDTEEKEGKASSDESSEEEEEEE----------EEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 143 -----------~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~----------~~llS--aD-~IKIWD~~tG~ 190 (358)
...+ .+++|+|++ .+|++ .| .|+|||+.+|+
T Consensus 343 ~~g~~~~~~~~~~~v-----------------~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 343 LAVDEHGDSLAEPGV-----------------FDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CCBCTTSCBCSSCCE-----------------EEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred hccccccccccCCce-----------------eEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 3333 889999998 68886 46 99999998874
No 55
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.68 E-value=4.3e-15 Score=139.69 Aligned_cols=158 Identities=10% Similarity=0.015 Sum_probs=110.1
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|.+.++.++.+..|+.... ..++++.+. |...|++++|+|||++| ++|+.++.|++||+.+.....
T Consensus 21 ~~l~~~~~d~~v~i~~~~~~-----------~~~~~~~~~~h~~~v~~~~~~~~~~~l-~~~~~dg~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 21 TQIAICPNNHEVHIYEKSGN-----------KWVQVHELKEHNGQVTGVDWAPDSNRI-VTCGTDRNAYVWTLKGRTWKP 88 (372)
T ss_dssp SEEEEECSSSEEEEEEEETT-----------EEEEEEEEECCSSCEEEEEEETTTTEE-EEEETTSCEEEEEEETTEEEE
T ss_pred CEEEEEeCCCEEEEEeCCCC-----------cEEeeeeecCCCCcccEEEEeCCCCEE-EEEcCCCeEEEEECCCCeeee
Confidence 46778888999999983221 134566664 78899999999999987 567789999999997654221
Q ss_pred eeec--cCceEEEEEeecC---------------------------------CCCCeeEEEEcCCCCEEEEEeCCCeEEE
Q psy2085 83 ERCF--DSEVVTFEILSDD---------------------------------YSSELNSIAINPVHQLICVGTIEGKVEA 127 (358)
Q Consensus 83 ~r~~--d~e~v~f~~LS~D---------------------------------~s~~In~i~~np~~~llasGs~DGtV~i 127 (358)
.... ....+....++++ +...|++++|+|++.+|++|+.||+|++
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~ 168 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRI 168 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEE
Confidence 1110 0111111111111 1256788888888888888888888888
Q ss_pred EeCC------------------CCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEEC
Q psy2085 128 WDPR------------------MKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTK 186 (358)
Q Consensus 128 WD~R------------------s~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~ 186 (358)
||++ ++.++..+..|...+ .++.|+|++.+|++ .| .|+|||.
T Consensus 169 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~~~~~d~~i~i~d~ 231 (372)
T 1k8k_C 169 FSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWV-----------------HGVCFSANGSRVAWVSHDSTVCLADA 231 (372)
T ss_dssp EECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCE-----------------EEEEECSSSSEEEEEETTTEEEEEEG
T ss_pred EEcccccccccccccccccccchhhheEecCCCCCeE-----------------EEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 8854 456666666665554 88999999999986 46 9999999
Q ss_pred CCCc
Q psy2085 187 EIKK 190 (358)
Q Consensus 187 ~tG~ 190 (358)
.+++
T Consensus 232 ~~~~ 235 (372)
T 1k8k_C 232 DKKM 235 (372)
T ss_dssp GGTT
T ss_pred CCCc
Confidence 9888
No 56
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.68 E-value=8.1e-16 Score=154.33 Aligned_cols=115 Identities=18% Similarity=0.248 Sum_probs=95.3
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE 122 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D 122 (358)
.|.+.|++|+|||||++| |||+.|++|+|||.....++ . + ..|++.|.+++|+|++++||+|+.|
T Consensus 14 GH~~~V~~~a~spdg~~l-as~~~d~~v~iWd~~~~~~~---~----------l-~gh~~~V~~l~fspdg~~las~~~d 78 (577)
T 2ymu_A 14 AHSSSVRGVAFSPDGQTI-ASASDDKTVKLWNRNGQLLQ---T----------L-TGHSSSVWGVAFSPDGQTIASASDD 78 (577)
T ss_dssp CCSSCEEEEEECTTSSCE-EEEETTSEEEEECTTSCEEE---E----------E-ECCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCcEEEEEECCCCCEE-EEEeCCCEEEEEECCCCEEE---E----------E-eCCCCCEEEEEECCCCCEEEEEeCC
Confidence 388999999999999987 67789999999996432111 1 1 1234789999999999999999999
Q ss_pred CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 123 GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 123 GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|+|++||. +++++.++.+|...+ .+++|+|++++|++ .| ++++|+.....
T Consensus 79 ~~i~vWd~-~~~~~~~~~~~~~~v-----------------~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~ 131 (577)
T 2ymu_A 79 KTVKLWNR-NGQLLQTLTGHSSSV-----------------RGVAFSPDGQTIASASDDKTVKLWNRNGQL 131 (577)
T ss_dssp SCEEEEET-TSCEEEEECCCSSCE-----------------EEEEECTTSSEEEEEETTSCEEEEETTCCE
T ss_pred CEEEEEEC-CCCEEEEEECCCCCE-----------------EEEEECCCCCEEEEEcCCCceeecccccce
Confidence 99999995 778899999988777 88999999999997 36 99999986543
No 57
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.68 E-value=3.8e-15 Score=144.41 Aligned_cols=158 Identities=15% Similarity=0.137 Sum_probs=115.8
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
.+.+.++.++.+..|....+ ++..+....+...|.+++|+|||++| ++|+.++.|+|||+.+......
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~-----------~~~~~~~~~~~~~v~~v~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~ 171 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSG-----------SVSALAETDESTYVASVKWSHDGSFL-SVGLGNGLVDIYDVESQTKLRT 171 (401)
T ss_dssp TSEEEEEETTEEEEEETTTC-----------CEEEEEECCTTCCEEEEEECTTSSEE-EEEETTSCEEEEETTTCCEEEE
T ss_pred CCEEEEECCCeEEEeeCCCC-----------cEeEeeecCCCCCEEEEEECCCCCEE-EEECCCCeEEEEECcCCeEEEE
Confidence 35678888999999983222 12223334467889999999999987 5678899999999986543211
Q ss_pred e-eccCceEEEE-------Eeec--------------------CCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy2085 84 R-CFDSEVVTFE-------ILSD--------------------DYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK 135 (358)
Q Consensus 84 r-~~d~e~v~f~-------~LS~--------------------D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~ 135 (358)
. .....+..+. ..+. .+.+.|.+++|+|++.+|++|+.||+|++||++++.+
T Consensus 172 ~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 251 (401)
T 4aez_A 172 MAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIP 251 (401)
T ss_dssp ECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSE
T ss_pred ecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCc
Confidence 1 1111221111 0111 1227899999999999999999999999999999999
Q ss_pred eEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-E----ec-ceEEEECCCCc
Q psy2085 136 AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-S----SD-DDQAWTKEIKK 190 (358)
Q Consensus 136 i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-S----aD-~IKIWD~~tG~ 190 (358)
+..+..|...+ .+++|+|++..++ + .| .|++||+.+|+
T Consensus 252 ~~~~~~~~~~v-----------------~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~ 295 (401)
T 4aez_A 252 KFTKTNHNAAV-----------------KAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA 295 (401)
T ss_dssp EEEECCCSSCC-----------------CEEEECTTSTTEEEEECCTTTCEEEEEETTTCC
T ss_pred cEEecCCcceE-----------------EEEEECCCCCCEEEEecCCCCCEEEEEECCCCC
Confidence 99998887766 7899999876555 4 27 99999999988
No 58
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.67 E-value=1.7e-16 Score=162.71 Aligned_cols=142 Identities=11% Similarity=-0.105 Sum_probs=111.1
Q ss_pred EEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEE--EEcCCCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 5 YCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSV--RISPDGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v--~~SpDG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
+..++|.|+++..|+ .... .+++.+ .|...|++| .|+|+|..+++||+.|++|+|||+.+...
T Consensus 279 ~lasgs~DgtV~lWD~~~~~-------------~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~ 345 (524)
T 2j04_B 279 TVVCGFKNGFVAEFDLTDPE-------------VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIAT 345 (524)
T ss_dssp EEEEEETTSEEEEEETTBCS-------------SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHH
T ss_pred eEEEEeCCCEEEEEECCCCC-------------CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCc
Confidence 678899999999999 3221 012223 377889999 67899844568899999999999976321
Q ss_pred --eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccc
Q psy2085 81 --KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGK 158 (358)
Q Consensus 81 --k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~Gt 158 (358)
.+..|.. . ..|++|+|+|+++.|++|+.|++|++||++++.++.++.+|...|
T Consensus 346 ~~~~~~~~~-----------~--~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V------------ 400 (524)
T 2j04_B 346 TKTTVSRFR-----------G--SNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTI------------ 400 (524)
T ss_dssp HCEEEEECS-----------C--CSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCE------------
T ss_pred ccccccccc-----------c--CcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCce------------
Confidence 1111110 0 247899999999999999999999999999999989998888877
Q ss_pred cCCCceeeEEcCCCCEEEE--ec-ceEEEECCCC
Q psy2085 159 ASSDESSEEEEEEEEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 159 Rs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG 189 (358)
.+|+|||+|+.|+| .| +|+|||...+
T Consensus 401 -----~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 401 -----TAIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp -----EEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred -----EEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence 88999999999997 47 9999998653
No 59
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.67 E-value=7.4e-15 Score=141.21 Aligned_cols=160 Identities=11% Similarity=0.014 Sum_probs=115.2
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.+..+++.++.+..|+-... ++++.+ .|...|++++|+|||++| ++|+.+++|+|||+.+.....
T Consensus 110 ~~l~~~~~dg~i~iwd~~~~-------------~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~ 175 (420)
T 3vl1_A 110 RRFILGTTEGDIKVLDSNFN-------------LQREIDQAHVSEITKLKFFPSGEAL-ISSSQDMQLKIWSVKDGSNPR 175 (420)
T ss_dssp CEEEEEETTSCEEEECTTSC-------------EEEEETTSSSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTCCCCE
T ss_pred CEEEEEECCCCEEEEeCCCc-------------ceeeecccccCccEEEEECCCCCEE-EEEeCCCeEEEEeCCCCcCce
Confidence 46778889999999982221 234444 578899999999999976 577889999999998643211
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeC---------------------
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDC--------------------- 141 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~--------------------- 141 (358)
. + ..+...|++++|+|++.+|++|+.||+|++||+++++++..+..
T Consensus 176 ~---------~----~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 242 (420)
T 3vl1_A 176 T---------L----IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQL 242 (420)
T ss_dssp E---------E----ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSC
T ss_pred E---------E----cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCccee
Confidence 0 0 12336899999999999999999999999999999998877752
Q ss_pred ---CCCccc-cccCCCccc-------cc------c-----------CCCc-eeeEEcCCCC-EEEE--ec-ceEEEECCC
Q psy2085 142 ---AFNCIS-NERDTEEKE-------GK------A-----------SSDE-SSEEEEEEEE-EEES--SD-DDQAWTKEI 188 (358)
Q Consensus 142 ---~~~~v~-~~~~i~gl~-------Gt------R-----------s~~P-~sI~fs~d~~-~llS--aD-~IKIWD~~t 188 (358)
+...+. ..++.++-. |+ + ...+ .+++|+|++. +|++ .| .|+|||+.+
T Consensus 243 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~ 322 (420)
T 3vl1_A 243 HEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRS 322 (420)
T ss_dssp GGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred eecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCC
Confidence 112221 123333311 22 1 1112 8999999998 8886 46 999999998
Q ss_pred Cc
Q psy2085 189 KK 190 (358)
Q Consensus 189 G~ 190 (358)
++
T Consensus 323 ~~ 324 (420)
T 3vl1_A 323 PE 324 (420)
T ss_dssp TT
T ss_pred Cc
Confidence 75
No 60
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.67 E-value=7.7e-16 Score=148.09 Aligned_cols=143 Identities=8% Similarity=0.035 Sum_probs=111.2
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
.|.++++.++.+..|+-...+..+ .+.....+....|+|||++| ++|+.++.|+|||+.+....
T Consensus 69 ~~l~~~~~d~~v~i~d~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~-- 132 (420)
T 3vl1_A 69 SHLYKARLDGHDFLFNTIIRDGSK-------------MLKRADYTAVDTAKLQMRRF-ILGTTEGDIKVLDSNFNLQR-- 132 (420)
T ss_dssp TTEEEEEETTEEEEEECCSEETTT-------------TSCSCCEEEEEEECSSSCEE-EEEETTSCEEEECTTSCEEE--
T ss_pred CeEEEEEcCCcEEEEEecccceee-------------EEecCCceEEEEEecCCCEE-EEEECCCCEEEEeCCCccee--
Confidence 357888999999999922111110 11122345666899999976 67788999999999864321
Q ss_pred eeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCc
Q psy2085 84 RCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDE 163 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P 163 (358)
... ..+...|++++|+|++.+|++|+.||+|++||+++++.+..+.+|...+
T Consensus 133 ~~~-----------~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v----------------- 184 (420)
T 3vl1_A 133 EID-----------QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATV----------------- 184 (420)
T ss_dssp EET-----------TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCE-----------------
T ss_pred eec-----------ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcE-----------------
Confidence 111 1233789999999999999999999999999999999999999888877
Q ss_pred eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 164 SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 164 ~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+++|+|++++|++ .| +|+|||+.+++
T Consensus 185 ~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 185 TDIAIIDRGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred EEEEEcCCCCEEEEEcCCCcEEEeECCCCc
Confidence 88999999999997 46 99999999988
No 61
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.67 E-value=2.4e-15 Score=143.84 Aligned_cols=146 Identities=10% Similarity=0.027 Sum_probs=113.7
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeC-------CCCEeEEEEcCCCCEEEEEEecCC---eEEEE
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEM-------PGVSTSVRISPDGQYVLSTGIYKP---RVRCY 73 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~-------~~~v~~v~~SpDG~~LlatG~~d~---~Irvw 73 (358)
.+.++++.++.+..|+-... ++++.+.. ...+++++|+|+|..++++|+.++ .|++|
T Consensus 179 ~~l~~~~~dg~v~iwd~~~~-------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~ 245 (416)
T 2pm9_A 179 HVFASAGSSNFASIWDLKAK-------------KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIW 245 (416)
T ss_dssp TEEEEESSSSCEEEEETTTT-------------EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEE
T ss_pred cEEEEEcCCCCEEEEECCCC-------------CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEE
Confidence 46778888999999983221 23334433 578999999999976667888888 99999
Q ss_pred EcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCC
Q psy2085 74 ETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDT 152 (358)
Q Consensus 74 Dl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i 152 (358)
|+.+.... .+.. ...+...|++++|+| ++.+|++|+.||+|++||+++++++.++..|...+
T Consensus 246 d~~~~~~~-~~~~----------~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v------ 308 (416)
T 2pm9_A 246 DLRNANTP-LQTL----------NQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWC------ 308 (416)
T ss_dssp ETTSTTSC-SBCC----------CSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCC------
T ss_pred eCCCCCCC-cEEe----------ecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCce------
Confidence 99864211 0011 002236799999999 89999999999999999999999999999887776
Q ss_pred CccccccCCCceeeEEcCCC-CEEEE--ec-ceEEEECCCCc
Q psy2085 153 EEKEGKASSDESSEEEEEEE-EEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 153 ~gl~GtRs~~P~sI~fs~d~-~~llS--aD-~IKIWD~~tG~ 190 (358)
.+++|+|++ .+|++ .| .|+|||+.++.
T Consensus 309 -----------~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 309 -----------FKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp -----------CCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred -----------EEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 789999999 78887 46 99999998765
No 62
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.67 E-value=3.6e-15 Score=139.97 Aligned_cols=148 Identities=16% Similarity=0.157 Sum_probs=113.5
Q ss_pred ceEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCC--CCEEEEEEecCCeEEEEEcCCCc
Q psy2085 3 VEYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPD--GQYVLSTGIYKPRVRCYETDNLS 79 (358)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpD--G~~LlatG~~d~~IrvwDl~~ls 79 (358)
-.|.++++.|+.+..|+-... +...++.+. +...|.+++|+|+ |++| ++|+.++.|+|||+.+..
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENG-----------RWSQIAVHAVHSASVNSVQWAPHEYGPLL-LVASSDGKVSVVEFKENG 136 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETT-----------EEEEEEEECCCSSCEEEEEECCGGGCSEE-EEEETTSEEEEEECCTTS
T ss_pred CCEEEEeccCCEEEEEEcCCC-----------ceeEeeeecCCCcceEEEEeCCCCCCCEE-EEecCCCcEEEEecCCCC
Confidence 368899999999999993221 133444443 7789999999999 8876 567789999999998653
Q ss_pred eeeeeeccCceEEEEEeecCCCCCeeEEEEcC-------------CCCEEEEEeCCCeEEEEeCCCCce----eEEEeCC
Q psy2085 80 MKFERCFDSEVVTFEILSDDYSSELNSIAINP-------------VHQLICVGTIEGKVEAWDPRMKVK----AGTLDCA 142 (358)
Q Consensus 80 lk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-------------~~~llasGs~DGtV~iWD~Rs~~~----i~~L~~~ 142 (358)
..... .+ ..+...|++++|+| ++.+|++|+.||+|++||++++.. +..+.+|
T Consensus 137 ~~~~~---------~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h 205 (379)
T 3jrp_A 137 TTSPI---------II--DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 205 (379)
T ss_dssp CCCEE---------EE--ECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred ceeeE---------Ee--cCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecc
Confidence 21110 01 12236899999999 689999999999999999988753 4566677
Q ss_pred CCccccccCCCccccccCCCceeeEEcCC---CCEEEE--ec-ceEEEECCCCc
Q psy2085 143 FNCISNERDTEEKEGKASSDESSEEEEEE---EEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 143 ~~~v~~~~~i~gl~GtRs~~P~sI~fs~d---~~~llS--aD-~IKIWD~~tG~ 190 (358)
...+ .+++|+|+ +.+|++ .| .|+|||+.++.
T Consensus 206 ~~~v-----------------~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 206 SDWV-----------------RDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp SSCE-----------------EEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred cCcE-----------------eEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 7666 88999999 788886 46 99999999874
No 63
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.67 E-value=2.7e-15 Score=156.26 Aligned_cols=155 Identities=16% Similarity=0.172 Sum_probs=114.4
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee-
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK- 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk- 81 (358)
.|..++|.|+++..|+-... .+++.| .|...|.+|+|+|||++| +||+.|++|+|||+......
T Consensus 443 ~~l~sgs~Dg~v~vwd~~~~-------------~~~~~~~~h~~~v~~~~~s~~~~~l-~s~s~D~~i~iwd~~~~~~~~ 508 (694)
T 3dm0_A 443 QFALSGSWDGELRLWDLAAG-------------VSTRRFVGHTKDVLSVAFSLDNRQI-VSASRDRTIKLWNTLGECKYT 508 (694)
T ss_dssp SEEEEEETTSEEEEEETTTT-------------EEEEEEECCSSCEEEEEECTTSSCE-EEEETTSCEEEECTTSCEEEE
T ss_pred CEEEEEeCCCcEEEEECCCC-------------cceeEEeCCCCCEEEEEEeCCCCEE-EEEeCCCEEEEEECCCCccee
Confidence 47889999999999993222 122333 488899999999999987 57788999999998643211
Q ss_pred eeee--ccCceEEEEEeec------------C-------------------CCCCeeEEEEcCCCCEEEEEeCCCeEEEE
Q psy2085 82 FERC--FDSEVVTFEILSD------------D-------------------YSSELNSIAINPVHQLICVGTIEGKVEAW 128 (358)
Q Consensus 82 ~~r~--~d~e~v~f~~LS~------------D-------------------~s~~In~i~~np~~~llasGs~DGtV~iW 128 (358)
.... .+...+....+++ | |.+.|++|+|+|++.+|++|+.||+|++|
T Consensus 509 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iw 588 (694)
T 3dm0_A 509 ISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLW 588 (694)
T ss_dssp ECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEE
T ss_pred eccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 1000 0011122222222 1 22679999999999999999999999999
Q ss_pred eCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCCCc
Q psy2085 129 DPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEIKK 190 (358)
Q Consensus 129 D~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~tG~ 190 (358)
|+++++++..+..+. .+ .++.|+|++..|++ .| .|+|||+.+++
T Consensus 589 d~~~~~~~~~~~~~~-~v-----------------~~~~~sp~~~~l~~~~~~~i~iwd~~~~~ 634 (694)
T 3dm0_A 589 DLAEGKKLYSLEANS-VI-----------------HALCFSPNRYWLCAATEHGIKIWDLESKS 634 (694)
T ss_dssp ETTTTEEEECCBCSS-CE-----------------EEEEECSSSSEEEEEETTEEEEEETTTTE
T ss_pred ECCCCceEEEecCCC-cE-----------------EEEEEcCCCcEEEEEcCCCEEEEECCCCC
Confidence 999999888776543 33 78999999998886 56 99999999887
No 64
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.66 E-value=1.1e-15 Score=145.06 Aligned_cols=149 Identities=8% Similarity=-0.007 Sum_probs=106.8
Q ss_pred ceEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 3 VEYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
-.|..+++.|+++..|+-...+ ...+....+...+++++|+|||++| ++|+.++.|+|||+.+.....
T Consensus 139 ~~~l~s~s~dg~i~~wd~~~~~-----------~~~~~~~~~~~~i~~~~~~pdg~~l-asg~~dg~i~iwd~~~~~~~~ 206 (343)
T 3lrv_A 139 TEYFIWADNRGTIGFQSYEDDS-----------QYIVHSAKSDVEYSSGVLHKDSLLL-ALYSPDGILDVYNLSSPDQAS 206 (343)
T ss_dssp CCEEEEEETTCCEEEEESSSSC-----------EEEEECCCSSCCCCEEEECTTSCEE-EEECTTSCEEEEESSCTTSCC
T ss_pred CCEEEEEeCCCcEEEEECCCCc-----------EEEEEecCCCCceEEEEECCCCCEE-EEEcCCCEEEEEECCCCCCCc
Confidence 3588999999999999932221 1111122345579999999999976 678899999999998754220
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeC---CCCccccccCCCcccccc
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDC---AFNCISNERDTEEKEGKA 159 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~---~~~~v~~~~~i~gl~GtR 159 (358)
. .+...+.+.|++|+|+|++.+|++|+ |++|++||+|+++++.++.. +...+..
T Consensus 207 -~----------~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~----------- 263 (343)
T 3lrv_A 207 -S----------RFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGT----------- 263 (343)
T ss_dssp -E----------ECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CC-----------
T ss_pred -c----------EEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccc-----------
Confidence 0 01112337899999999999999999 55999999999887655543 2112100
Q ss_pred CCCceeeEEcCCCCEEEE--e-c-ceEEEECCCCc
Q psy2085 160 SSDESSEEEEEEEEEEES--S-D-DDQAWTKEIKK 190 (358)
Q Consensus 160 s~~P~sI~fs~d~~~llS--a-D-~IKIWD~~tG~ 190 (358)
.+++|+|+|++|++ + | .|+||+..++.
T Consensus 264 ----~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 264 ----VTYDIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp ----EEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred ----eEEEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 35999999999997 7 8 99999997654
No 65
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.65 E-value=2.6e-15 Score=145.35 Aligned_cols=130 Identities=10% Similarity=0.125 Sum_probs=93.4
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC-CEEEEEeC
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH-QLICVGTI 121 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~-~llasGs~ 121 (358)
.|...|++++|+|||++|+ +| .|+.|+|||+........ ..+.... --..+...|++++|+|++ .+|++|+.
T Consensus 175 ~h~~~v~~~~~~~~~~~l~-s~-~d~~i~iwd~~~~~~~~~-~~~~~~~----~~~~~~~~v~~~~~~p~~~~~l~s~~~ 247 (447)
T 3dw8_B 175 AHTYHINSISINSDYETYL-SA-DDLRINLWHLEITDRSFN-IVDIKPA----NMEELTEVITAAEFHPNSCNTFVYSSS 247 (447)
T ss_dssp CCSSCCCEEEECTTSSEEE-EE-CSSEEEEEETTEEEEEEE-EEECCCS----SGGGCCCCEEEEEECSSCTTEEEEEET
T ss_pred CCCcceEEEEEcCCCCEEE-Ee-CCCeEEEEECCCCCceee-eeecccc----cccccCcceEEEEECCCCCcEEEEEeC
Confidence 4788999999999999875 56 699999999984211110 0000000 011233689999999998 99999999
Q ss_pred CCeEEEEeCCCCce----eEEEeCCCCccccc------cCCCccccccCCCceeeEEcCCCCEEEEe-c-ceEEEECCC-
Q psy2085 122 EGKVEAWDPRMKVK----AGTLDCAFNCISNE------RDTEEKEGKASSDESSEEEEEEEEEEESS-D-DDQAWTKEI- 188 (358)
Q Consensus 122 DGtV~iWD~Rs~~~----i~~L~~~~~~v~~~------~~i~gl~GtRs~~P~sI~fs~d~~~llSa-D-~IKIWD~~t- 188 (358)
||+|++||++++.. +..+..+..+.... ..+ .+|+|+|+|.+|+++ + +|+|||+.+
T Consensus 248 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-----------~~~~~s~~g~~l~~~~~~~v~iwd~~~~ 316 (447)
T 3dw8_B 248 KGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSI-----------SDVKFSHSGRYMMTRDYLSVKVWDLNME 316 (447)
T ss_dssp TSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCE-----------EEEEECTTSSEEEEEESSEEEEEETTCC
T ss_pred CCeEEEEECcCCccccceeeEeccCCCccccccccccCceE-----------EEEEECCCCCEEEEeeCCeEEEEeCCCC
Confidence 99999999999987 78888776410000 011 889999999999985 5 999999987
Q ss_pred Cc
Q psy2085 189 KK 190 (358)
Q Consensus 189 G~ 190 (358)
++
T Consensus 317 ~~ 318 (447)
T 3dw8_B 317 NR 318 (447)
T ss_dssp SS
T ss_pred cc
Confidence 55
No 66
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.65 E-value=5.9e-15 Score=139.92 Aligned_cols=173 Identities=10% Similarity=0.035 Sum_probs=111.0
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
+.+.++.++.+..|+-.... +++.+ .+...|.+++|+|+|++++++|+.++.|++||+........
T Consensus 158 ~~~~~~~~~~v~~~d~~~~~-------------~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~ 224 (408)
T 4a11_B 158 LVAVGTRGPKVQLCDLKSGS-------------CSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLI 224 (408)
T ss_dssp EEEEEESSSSEEEEESSSSC-------------CCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSE
T ss_pred EEEEEcCCCeEEEEeCCCcc-------------eeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccc
Confidence 77888889999999832211 12333 37788999999999998788999999999999976431111
Q ss_pred ee--ccCc-eEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCcc-----ccc--cCCC
Q psy2085 84 RC--FDSE-VVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCI-----SNE--RDTE 153 (358)
Q Consensus 84 r~--~d~e-~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v-----~~~--~~i~ 153 (358)
.. .... ..........+...|++++|+|++.+|++|+.||+|++||+++++....+..+.... ... ....
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (408)
T 4a11_B 225 TLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCS 304 (408)
T ss_dssp ECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSS
T ss_pred cccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCC
Confidence 00 0000 000000001233789999999999999999999999999999987654443221110 000 0000
Q ss_pred c-c-c----c----------c-----c-CCCc-eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 154 E-K-E----G----------K-----A-SSDE-SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 154 g-l-~----G----------t-----R-s~~P-~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
. + . | . . +..+ .+++|+|++.+|+| .| .|+|||+.+++
T Consensus 305 ~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 305 SEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp SCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC--
T ss_pred ceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCC
Confidence 0 0 0 1 1 1 1122 88999999999997 36 99999999876
No 67
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.65 E-value=1.4e-15 Score=143.52 Aligned_cols=146 Identities=14% Similarity=0.107 Sum_probs=106.7
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcC--CCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISP--DGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~Sp--DG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.|..++|.|+++..|+-... ...+++.| .|.+.|++|+|+| +|++| +||+.|++|+|||+.+...
T Consensus 26 ~~lasgs~D~~v~lwd~~~~-----------~~~~~~~l~gH~~~V~~v~~~~~~~~~~l-~s~s~D~~v~iWd~~~~~~ 93 (316)
T 3bg1_A 26 TRLATCSSDRSVKIFDVRNG-----------GQILIADLRGHEGPVWQVAWAHPMYGNIL-ASCSYDRKVIIWREENGTW 93 (316)
T ss_dssp CEEEEEETTTEEEEEEEETT-----------EEEEEEEEECCSSCEEEEEECCGGGSSCE-EEEETTSCEEEECCSSSCC
T ss_pred CEEEEEeCCCeEEEEEecCC-----------CcEEEEEEcCCCccEEEEEeCCCCCCCEE-EEEECCCEEEEEECCCCcc
Confidence 47889999999999993221 11345555 4889999999987 47765 6788999999999986422
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCC--CCEEEEEeCCCeEEEEeCCCCce---eEEEeCCCCccccccCCCcc
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPV--HQLICVGTIEGKVEAWDPRMKVK---AGTLDCAFNCISNERDTEEK 155 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~--~~llasGs~DGtV~iWD~Rs~~~---i~~L~~~~~~v~~~~~i~gl 155 (358)
+.... + ..+...|++|+|+|+ +.+|++|+.||+|++||++++.. ...+.+|...+
T Consensus 94 ~~~~~----------~-~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v--------- 153 (316)
T 3bg1_A 94 EKSHE----------H-AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGC--------- 153 (316)
T ss_dssp CEEEE----------E-CCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCB---------
T ss_pred eEEEE----------c-cCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCc---------
Confidence 11110 1 223468999999998 77999999999999999987643 23344555444
Q ss_pred ccccCCCceeeEEcCC-----------------CCEEEE--ec-ceEEEECCCC
Q psy2085 156 EGKASSDESSEEEEEE-----------------EEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 156 ~GtRs~~P~sI~fs~d-----------------~~~llS--aD-~IKIWD~~tG 189 (358)
.++.|+|+ +.+|+| .| +|+|||..++
T Consensus 154 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~ 199 (316)
T 3bg1_A 154 --------NAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEED 199 (316)
T ss_dssp --------CCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTT
T ss_pred --------ceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCC
Confidence 67888887 357886 47 9999999765
No 68
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.65 E-value=1.1e-14 Score=135.74 Aligned_cols=113 Identities=14% Similarity=0.168 Sum_probs=88.4
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.|..+++.++.+..|+ +...+ .+...+ .|...|++++|+|||++| ++|+.++.|+|||+.+....
T Consensus 55 ~~l~~~~~dg~i~iw~~~~~~~------------~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~ 121 (368)
T 3mmy_A 55 NFLIAGSWANDVRCWEVQDSGQ------------TIPKAQQMHTGPVLDVCWSDDGSKV-FTASCDKTAKMWDLSSNQAI 121 (368)
T ss_dssp EEEEEEETTSEEEEEEECTTSC------------EEEEEEEECSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTTEEE
T ss_pred eEEEEECCCCcEEEEEcCCCCc------------eeEEEeccccCCEEEEEECcCCCEE-EEEcCCCcEEEEEcCCCCce
Confidence 6889999999999999 43221 121223 478899999999999987 56788999999999875432
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEE--cCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCC
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAI--NPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAF 143 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~--np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~ 143 (358)
... .+...|++++| +|++.+|++|+.||+|++||+++++++..+..+.
T Consensus 122 ~~~--------------~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 171 (368)
T 3mmy_A 122 QIA--------------QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE 171 (368)
T ss_dssp EEE--------------ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS
T ss_pred eec--------------cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC
Confidence 111 12267999999 8999999999999999999999999887777543
No 69
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.65 E-value=9e-15 Score=133.89 Aligned_cols=139 Identities=12% Similarity=0.068 Sum_probs=110.1
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee--CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE--MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe--~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+.++++.++.+..|+.. +.++.+. +...+.+++|+|+|+ + ++|+.++.|++||+.+....
T Consensus 156 ~~l~~~~~d~~i~i~d~~---------------~~~~~~~~~~~~~i~~~~~~~~~~-~-~~~~~dg~i~i~d~~~~~~~ 218 (313)
T 3odt_A 156 NKFLTASADKTIKLWQND---------------KVIKTFSGIHNDVVRHLAVVDDGH-F-ISCSNDGLIKLVDMHTGDVL 218 (313)
T ss_dssp TEEEEEETTSCEEEEETT---------------EEEEEECSSCSSCEEEEEEEETTE-E-EEEETTSEEEEEETTTCCEE
T ss_pred CEEEEEECCCCEEEEecC---------------ceEEEEeccCcccEEEEEEcCCCe-E-EEccCCCeEEEEECCchhhh
Confidence 467888889999999710 2233333 678899999999998 4 57788999999999865322
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCC
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASS 161 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~ 161 (358)
.. + ..+...|++++|+|++ .|++|+.||+|++||+++++++..+..+...+
T Consensus 219 ~~---------~----~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i--------------- 269 (313)
T 3odt_A 219 RT---------Y----EGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISI--------------- 269 (313)
T ss_dssp EE---------E----ECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCE---------------
T ss_pred hh---------h----hcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceE---------------
Confidence 11 0 1123679999999999 58899999999999999999999999887776
Q ss_pred CceeeEEcCCCCEEEE-ec-ceEEEECCCCc
Q psy2085 162 DESSEEEEEEEEEEES-SD-DDQAWTKEIKK 190 (358)
Q Consensus 162 ~P~sI~fs~d~~~llS-aD-~IKIWD~~tG~ 190 (358)
.++.|+|++.++++ .| .|+|||+.+++
T Consensus 270 --~~~~~~~~~~~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 270 --WSVDCMSNGDIIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp --EEEEECTTSCEEEEETTSCEEEEESCGGG
T ss_pred --EEEEEccCCCEEEEeCCCcEEEEeCCCCc
Confidence 78999999986654 56 99999998875
No 70
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.65 E-value=9.2e-15 Score=141.66 Aligned_cols=134 Identities=13% Similarity=0.230 Sum_probs=77.9
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC-CEEEEEe-
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH-QLICVGT- 120 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~-~llasGs- 120 (358)
.|.+.|.+++|+|||++| ++|+.++.|+|||+.+....... ..+...|.+++|+|++ .++++|+
T Consensus 215 ~~~~~v~~~~~~~~~~~l-~s~~~d~~v~iwd~~~~~~~~~~-------------~~~~~~v~~~~~~p~~~~ll~~~~g 280 (401)
T 4aez_A 215 GHSSEVCGLAWRSDGLQL-ASGGNDNVVQIWDARSSIPKFTK-------------TNHNAAVKAVAWCPWQSNLLATGGG 280 (401)
T ss_dssp CCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTCSSEEEEE-------------CCCSSCCCEEEECTTSTTEEEEECC
T ss_pred CCCCCeeEEEEcCCCCEE-EEEeCCCeEEEccCCCCCccEEe-------------cCCcceEEEEEECCCCCCEEEEecC
Confidence 478899999999999976 56788999999999864332111 0111445566666543 3555543
Q ss_pred -CCCeEEEEeCCCCceeEEEeC--CCCcc----------ccccCCCc-cc------cc--------cCCCc-eeeEEcCC
Q psy2085 121 -IEGKVEAWDPRMKVKAGTLDC--AFNCI----------SNERDTEE-KE------GK--------ASSDE-SSEEEEEE 171 (358)
Q Consensus 121 -~DGtV~iWD~Rs~~~i~~L~~--~~~~v----------~~~~~i~g-l~------Gt--------Rs~~P-~sI~fs~d 171 (358)
.||+|++||+++++++..+.. ....+ ......+| +. |. .+..+ .+++|+|+
T Consensus 281 s~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~d 360 (401)
T 4aez_A 281 TMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPD 360 (401)
T ss_dssp TTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTT
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCC
Confidence 456666666655555443320 00000 00000011 00 00 00111 88999999
Q ss_pred CCEEEE--ec-ceEEEECCCCc
Q psy2085 172 EEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 172 ~~~llS--aD-~IKIWD~~tG~ 190 (358)
+.+|++ .| .|+|||+.+|+
T Consensus 361 g~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 361 GRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp SSEEEEECTTSEEEEEECCC--
T ss_pred CCEEEEEeCCCcEEEEECCCCc
Confidence 999997 46 99999999887
No 71
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.64 E-value=6.9e-15 Score=139.42 Aligned_cols=177 Identities=13% Similarity=0.137 Sum_probs=110.8
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe------eCCCCEeEEEEcC-CCCEEEEEEecCCeEEEEEc
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF------EMPGVSTSVRISP-DGQYVLSTGIYKPRVRCYET 75 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf------e~~~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl 75 (358)
.|..+++.++.+..|+ ..... ...- ........ .|...|.+++|+| ++++| ++|+.++.|++||+
T Consensus 57 ~~l~~~~~dg~i~iw~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~d~~i~iwd~ 129 (408)
T 4a11_B 57 RYMLSGGSDGVIVLYDLENSSR-QSYY-----TCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMF-TSSSFDKTLKVWDT 129 (408)
T ss_dssp CEEEEEETTSCEEEEECCCCSS-SSCE-----EECEEEEECTTCTTCCSSCEEEEEECTTCTTCE-EEEETTSEEEEEET
T ss_pred CEEEEEcCCCeEEEEECCCCcc-cceE-----eccccccccccccccCCCcEEEEEEccCCCcEE-EEEeCCCeEEEeeC
Confidence 5788999999999999 32221 1100 00111111 2778899999999 55554 67788999999999
Q ss_pred CCCceeeeeeccCceEEE------------EEeecC-------------------CCCCeeEEEEcCCCC-EEEEEeCCC
Q psy2085 76 DNLSMKFERCFDSEVVTF------------EILSDD-------------------YSSELNSIAINPVHQ-LICVGTIEG 123 (358)
Q Consensus 76 ~~lslk~~r~~d~e~v~f------------~~LS~D-------------------~s~~In~i~~np~~~-llasGs~DG 123 (358)
.+............+... ...+.| +...|++++|+|++. +|++|+.||
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg 209 (408)
T 4a11_B 130 NTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADS 209 (408)
T ss_dssp TTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTS
T ss_pred CCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCC
Confidence 875432221111111111 111111 226799999999987 799999999
Q ss_pred eEEEEeCCCCc-eeEEEeCCCCccccccCCCccccccCCCc-eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 124 KVEAWDPRMKV-KAGTLDCAFNCISNERDTEEKEGKASSDE-SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 124 tV~iWD~Rs~~-~i~~L~~~~~~v~~~~~i~gl~GtRs~~P-~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+|++||++++. ++..+..+.......... . ...+..+ .+++|+|++.+|++ .| .|+|||+.+++
T Consensus 210 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 210 RVKLWDVRRASGCLITLDQHNGKKSQAVES--A-NTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp CEEEEETTCSSCCSEECCTTTTCSCCCTTT--S-SCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred cEEEEECCCCCcccccccccccccceeecc--c-cccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCc
Confidence 99999999876 556664332211000000 0 0000011 88999999999986 46 99999999887
No 72
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.64 E-value=6.1e-15 Score=145.32 Aligned_cols=147 Identities=14% Similarity=0.034 Sum_probs=113.2
Q ss_pred EEEeecCCceeeeeec--cCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 6 CYQTNWHKQAVTLVII--GGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~--~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
+++++.++.+..|+-. .+ ..+..+....++..|++++|+|||++| ++|+.++.|++|++.+......
T Consensus 118 ~~~~~~dg~v~iwd~~~~~~----------~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~~g~v~~~~~~~~~~~~~ 186 (450)
T 2vdu_B 118 IACADSDKSLLVFDVDKTSK----------NVLKLRKRFCFSKRPNAISIAEDDTTV-IIADKFGDVYSIDINSIPEEKF 186 (450)
T ss_dssp EEEEGGGTEEEEEEECSSSS----------SCEEEEEEEECSSCEEEEEECTTSSEE-EEEETTSEEEEEETTSCCCSSC
T ss_pred EEEECCCCeEEEEECcCCCC----------ceeeeeecccCCCCceEEEEcCCCCEE-EEEeCCCcEEEEecCCcccccc
Confidence 3677888889999832 22 234455555788999999999999987 5677899999999976432100
Q ss_pred eeccCceEEEEEeecCCCCCeeEEEEcCC---CCEEEEEeCCCeEEEEeCCCCceeEE-EeCCCCccccccCCCcccccc
Q psy2085 84 RCFDSEVVTFEILSDDYSSELNSIAINPV---HQLICVGTIEGKVEAWDPRMKVKAGT-LDCAFNCISNERDTEEKEGKA 159 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D~s~~In~i~~np~---~~llasGs~DGtV~iWD~Rs~~~i~~-L~~~~~~v~~~~~i~gl~GtR 159 (358)
.. ... ..+...|++|+|+|+ +.+|++|+.||+|++||+++++++.. +.+|...+
T Consensus 187 -~~--~~~------~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v------------- 244 (450)
T 2vdu_B 187 -TQ--EPI------LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFV------------- 244 (450)
T ss_dssp -CC--CCS------EECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCE-------------
T ss_pred -cc--eee------ecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCce-------------
Confidence 00 000 012267999999999 88999999999999999999998877 55777666
Q ss_pred CCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 160 SSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 160 s~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+++|+ ++.+|+| .| +|+|||+.+|+
T Consensus 245 ----~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 245 ----SSICCG-KDYLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp ----EEEEEC-STTEEEEEESSSEEEEEETTTCC
T ss_pred ----EEEEEC-CCCEEEEEeCCCeEEEEECCCCc
Confidence 889999 9999997 46 99999999998
No 73
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.64 E-value=1.4e-15 Score=157.35 Aligned_cols=117 Identities=12% Similarity=0.142 Sum_probs=88.8
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG 123 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG 123 (358)
+...|.+|+|||||++| |+++.++.|+|||...+-..+. |... + -+..|.+++|||++++||+|+.||
T Consensus 84 ~~~~V~~vawSPdG~~L-As~s~dg~V~iwd~~~~l~~l~-~~~~-~---------~~~sv~svafSPDG~~LAsgs~DG 151 (588)
T 2j04_A 84 PVCYPRVCKPSPIDDWM-AVLSNNGNVSVFKDNKMLTNLD-SKGN-L---------SSRTYHCFEWNPIESSIVVGNEDG 151 (588)
T ss_dssp CSCCEEEEEECSSSSCE-EEEETTSCEEEEETTEEEEECC-CSSC-S---------TTTCEEEEEECSSSSCEEEEETTS
T ss_pred CCCcEEEEEECCCCCEE-EEEeCCCcEEEEeCCceeeecc-CCCc-c---------ccccEEEEEEcCCCCEEEEEcCCC
Confidence 35679999999999987 6778999999999654111111 1100 0 003599999999999999999999
Q ss_pred eEEEEeCCCCc-------eeEEEeC----CCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCCCc
Q psy2085 124 KVEAWDPRMKV-------KAGTLDC----AFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEIKK 190 (358)
Q Consensus 124 tV~iWD~Rs~~-------~i~~L~~----~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~tG~ 190 (358)
+|++||+.++. .+.++.. |.+.| .+|+|+|+| .+++ .| +|++||+.++.
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V-----------------~sVawSPdg-Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWV-----------------THIVWYEDV-LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCE-----------------EEEEEETTE-EEEEETTCCEEEECCCSSS
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccE-----------------EEEEEcCCc-EEEEeCCCeEEEEECCCCc
Confidence 99999999886 3677743 33444 889999999 5554 67 99999998766
No 74
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.64 E-value=2.1e-15 Score=163.43 Aligned_cols=169 Identities=12% Similarity=0.109 Sum_probs=113.8
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFER 84 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r 84 (358)
|..+++.|+++..|+-..+ ++++.+.+++.|++++|+|||++| ++|+.++.|++||+.+..+...+
T Consensus 71 ~L~S~s~D~~v~lWd~~~~-------------~~~~~~~~~~~V~~v~~sp~g~~l-~sgs~dg~V~lwd~~~~~~~~~~ 136 (902)
T 2oaj_A 71 YLVVINAKDTVYVLSLYSQ-------------KVLTTVFVPGKITSIDTDASLDWM-LIGLQNGSMIVYDIDRDQLSSFK 136 (902)
T ss_dssp EEEEEETTCEEEEEETTTC-------------SEEEEEECSSCEEEEECCTTCSEE-EEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEEEECcCeEEEEECCCC-------------cEEEEEcCCCCEEEEEECCCCCEE-EEEcCCCcEEEEECCCCccccce
Confidence 6788888888888882222 245666788899999999999987 57788999999999875431000
Q ss_pred eccCceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCc
Q psy2085 85 CFDSEVVTFEILSDDYSSELNSIAINPV-HQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDE 163 (358)
Q Consensus 85 ~~d~e~v~f~~LS~D~s~~In~i~~np~-~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P 163 (358)
..... ........+.+.|++|+|+|+ ..+|++|+.||+| +||+++++++.++..+..+...........-..+..+
T Consensus 137 -i~~~~-~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~ 213 (902)
T 2oaj_A 137 -LDNLQ-KSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPK 213 (902)
T ss_dssp -ECCHH-HHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCC
T ss_pred -ecccc-ccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCC
Confidence 00000 000000223478999999996 4799999999999 9999999999888765211000000000000000011
Q ss_pred -eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 164 -SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 164 -~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+|+|+|+|.+|+| .| +|+|||..+|+
T Consensus 214 V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 214 VIQSLYHPNSLHIITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp EEEEEECTTSSEEEEEETTCCEEEEETTTCC
T ss_pred eEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 88999999999997 46 99999999987
No 75
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.6e-14 Score=135.48 Aligned_cols=147 Identities=16% Similarity=0.149 Sum_probs=111.7
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCC--CCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPD--GQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpD--G~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.|..+++.++.+..|+-.. ...++++.+. |...|++++|+|+ |++| ++|+.|+.|+|||+.+...
T Consensus 24 ~~l~~~~~dg~i~iw~~~~-----------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~ 91 (379)
T 3jrp_A 24 KRLATCSSDKTIKIFEVEG-----------ETHKLIDTLTGHEGPVWRVDWAHPKFGTIL-ASCSYDGKVLIWKEENGRW 91 (379)
T ss_dssp SEEEEEETTSCEEEEEEET-----------TEEEEEEEECCCSSCEEEEEECCGGGCSEE-EEEETTSCEEEEEEETTEE
T ss_pred CEEEEEECCCcEEEEecCC-----------CcceeeeEecCCCCcEEEEEeCCCCCCCEE-EEeccCCEEEEEEcCCCce
Confidence 4778889999999998221 1124555554 7789999999988 8876 6778899999999986532
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCC--CCEEEEEeCCCeEEEEeCCCCce--eEEEeCCCCccccccCCCccc
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPV--HQLICVGTIEGKVEAWDPRMKVK--AGTLDCAFNCISNERDTEEKE 156 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~--~~llasGs~DGtV~iWD~Rs~~~--i~~L~~~~~~v~~~~~i~gl~ 156 (358)
..... -..+...|++++|+|+ +.+|++|+.||+|++||++++.. ...+..|...+
T Consensus 92 ~~~~~-----------~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v---------- 150 (379)
T 3jrp_A 92 SQIAV-----------HAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV---------- 150 (379)
T ss_dssp EEEEE-----------ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCE----------
T ss_pred eEeee-----------ecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCce----------
Confidence 11111 1123368999999999 89999999999999999998854 34556666665
Q ss_pred cccCCCceeeEEcC-------------CCCEEEE--ec-ceEEEECCCCc
Q psy2085 157 GKASSDESSEEEEE-------------EEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 157 GtRs~~P~sI~fs~-------------d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.++.|+| ++..|++ .| .|+|||+.++.
T Consensus 151 -------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 193 (379)
T 3jrp_A 151 -------NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA 193 (379)
T ss_dssp -------EEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTT
T ss_pred -------EEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCC
Confidence 7899999 6888886 46 99999998765
No 76
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.63 E-value=9.7e-15 Score=139.03 Aligned_cols=153 Identities=19% Similarity=0.218 Sum_probs=113.9
Q ss_pred eE-EEEeecCCceeeeeecc------CcccCCCcccccceeEEEE-----eeCCCCEeEEEEcCCCCEEEEEEecCCeEE
Q psy2085 4 EY-CYQTNWHKQAVTLVIIG------GRYLLPTNDIRRRIELIQD-----FEMPGVSTSVRISPDGQYVLSTGIYKPRVR 71 (358)
Q Consensus 4 ~~-~~~~~~~~~~~~~~~~~------~r~lk~d~~~~~rIeliqd-----fe~~~~v~~v~~SpDG~~LlatG~~d~~Ir 71 (358)
.+ .++++.++.+..|+-.. .+.++-.+ .. .++. -.+...+.+++|+|+| + +++|+.++.|+
T Consensus 138 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~i~~~~~~~~~-~-l~~~~~dg~i~ 210 (397)
T 1sq9_A 138 SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSP----TL-ELQGTVESPMTPSQFATSVDISERG-L-IATGFNNGTVQ 210 (397)
T ss_dssp CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCC----EE-EEEEEECCSSSSCCCCCEEEECTTS-E-EEEECTTSEEE
T ss_pred ceEEEEEeCCCcEEEEeCCccccccccceeeccC----cc-eeeeeeccccCCCCCceEEEECCCc-e-EEEEeCCCcEE
Confidence 46 78899999999999322 22222111 00 1111 2357789999999999 5 47788999999
Q ss_pred EEEcCCCceeeeeeccCceEEEEEeecCC---CCCeeEEEEcCCCCEEEEEeCC---CeEEEEeCCCCceeEEEeC----
Q psy2085 72 CYETDNLSMKFERCFDSEVVTFEILSDDY---SSELNSIAINPVHQLICVGTIE---GKVEAWDPRMKVKAGTLDC---- 141 (358)
Q Consensus 72 vwDl~~lslk~~r~~d~e~v~f~~LS~D~---s~~In~i~~np~~~llasGs~D---GtV~iWD~Rs~~~i~~L~~---- 141 (358)
+||+.+..... .. . ...++ ...|++++|+|++.+|++|+.| |.|++||+++++++..+..
T Consensus 211 i~d~~~~~~~~--~~-------~-~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~ 280 (397)
T 1sq9_A 211 ISELSTLRPLY--NF-------E-SQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHS 280 (397)
T ss_dssp EEETTTTEEEE--EE-------E-CCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC---
T ss_pred EEECCCCceeE--EE-------e-ccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCccc
Confidence 99998643211 11 0 00112 3689999999999999999999 9999999999999999987
Q ss_pred ---------CCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 142 ---------AFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 142 ---------~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|...+ .++.|+|++++|++ .| .|+|||+.+++
T Consensus 281 ~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 281 SQASLGEFAHSSWV-----------------MSLSFNDSGETLCSAGWDGKLRFWDVKTKE 324 (397)
T ss_dssp -----CCBSBSSCE-----------------EEEEECSSSSEEEEEETTSEEEEEETTTTE
T ss_pred ccccccccccCCcE-----------------EEEEECCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 55555 88999999999997 46 99999999987
No 77
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.63 E-value=9.8e-15 Score=136.17 Aligned_cols=147 Identities=7% Similarity=-0.023 Sum_probs=108.4
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcC---CCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISP---DGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~Sp---DG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.|.++++.++.+..|+-... +++....++..+.+++|+| +|.+| ++|+.++.|++||+.+...
T Consensus 181 ~~l~~~~~d~~i~i~d~~~~-------------~~~~~~~~~~~v~~~~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~ 246 (357)
T 3i2n_A 181 RVVCAGYDNGDIKLFDLRNM-------------ALRWETNIKNGVCSLEFDRKDISMNKL-VATSLEGKFHVFDMRTQHP 246 (357)
T ss_dssp CEEEEEETTSEEEEEETTTT-------------EEEEEEECSSCEEEEEESCSSSSCCEE-EEEESTTEEEEEEEEEEET
T ss_pred CEEEEEccCCeEEEEECccC-------------ceeeecCCCCceEEEEcCCCCCCCCEE-EEECCCCeEEEEeCcCCCc
Confidence 46778888889999983221 1344466788999999999 99987 5677899999999875321
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCc-------------------eeEEEe
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIEGKVEAWDPRMKV-------------------KAGTLD 140 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~DGtV~iWD~Rs~~-------------------~i~~L~ 140 (358)
. ....+..+ ..+...|++++|+|++. +|++|+.||.|++||++++. ++..+.
T Consensus 247 ~-------~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 318 (357)
T 3i2n_A 247 T-------KGFASVSE-KAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVT 318 (357)
T ss_dssp T-------TEEEEEEE-ECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEE
T ss_pred c-------cceeeecc-CCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccc
Confidence 1 01111111 12337899999999998 89999999999999998653 445556
Q ss_pred CCCCccccccCCCccccccCCCceeeEEcCCCCEEE-E--ec-ceEEEECCCC
Q psy2085 141 CAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-S--SD-DDQAWTKEIK 189 (358)
Q Consensus 141 ~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-S--aD-~IKIWD~~tG 189 (358)
+|...+ .+++|+|+++.|+ | .| .|+|||+.++
T Consensus 319 ~~~~~v-----------------~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 319 LSTQPI-----------------SSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp CCSSCE-----------------EEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred cCCCCe-----------------eEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 665555 8899999999887 5 36 9999999865
No 78
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.63 E-value=4e-15 Score=138.81 Aligned_cols=126 Identities=10% Similarity=0.143 Sum_probs=97.6
Q ss_pred ceeEEEEe-eCCCCEeEEEEcCC---CCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEc
Q psy2085 35 RIELIQDF-EMPGVSTSVRISPD---GQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAIN 110 (358)
Q Consensus 35 rIeliqdf-e~~~~v~~v~~SpD---G~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~n 110 (358)
..+.++.+ .|.+.|++++|+|+ |++| ++|+.++.|+|||+.+........ + ..+...|++++|+
T Consensus 28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l-~~~~~dg~i~iw~~~~~~~~~~~~---------~--~~h~~~v~~~~~~ 95 (368)
T 3mmy_A 28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFL-IAGSWANDVRCWEVQDSGQTIPKA---------Q--QMHTGPVLDVCWS 95 (368)
T ss_dssp TTCCEECSSCCSSCEEEEEECCTTSSSEEE-EEEETTSEEEEEEECTTSCEEEEE---------E--EECSSCEEEEEEC
T ss_pred CcceeEeccCCCCceEEEEEcCCCCCceEE-EEECCCCcEEEEEcCCCCceeEEE---------e--ccccCCEEEEEEC
Confidence 34455555 37789999999999 5765 678889999999998632211111 0 1123689999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEE--cCCCCEEEE--ec-ceEEEE
Q psy2085 111 PVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEE--EEEEEEEES--SD-DDQAWT 185 (358)
Q Consensus 111 p~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~f--s~d~~~llS--aD-~IKIWD 185 (358)
|++++|++|+.||+|++||+++++.+.. ..|...+ .++.| +|++.+|++ .| .|+|||
T Consensus 96 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~~~l~~~~~dg~i~vwd 157 (368)
T 3mmy_A 96 DDGSKVFTASCDKTAKMWDLSSNQAIQI-AQHDAPV-----------------KTIHWIKAPNYSCVMTGSWDKTLKFWD 157 (368)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEE-EECSSCE-----------------EEEEEEECSSCEEEEEEETTSEEEEEC
T ss_pred cCCCEEEEEcCCCcEEEEEcCCCCceee-ccccCce-----------------EEEEEEeCCCCCEEEEccCCCcEEEEE
Confidence 9999999999999999999999987764 4455555 78999 889988886 46 999999
Q ss_pred CCCCc
Q psy2085 186 KEIKK 190 (358)
Q Consensus 186 ~~tG~ 190 (358)
+.+++
T Consensus 158 ~~~~~ 162 (368)
T 3mmy_A 158 TRSSN 162 (368)
T ss_dssp SSCSS
T ss_pred CCCCc
Confidence 99887
No 79
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.63 E-value=1.2e-14 Score=142.69 Aligned_cols=150 Identities=19% Similarity=0.208 Sum_probs=112.9
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc-eee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS-MKF 82 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls-lk~ 82 (358)
+..+++.++.+..|.-..... ....+.....+ .|...|.+++|+|++..++++|+.++.|+|||+.+.. .+.
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~------~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~ 269 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPK------EHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKP 269 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCB------GGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSC
T ss_pred eEEEEeCCCeEEEEeCCCCCC------CCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcc
Confidence 788899999999999222110 11223334455 4778899999999666677888899999999998642 110
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCCC-CceeEEEeCCCCccccccCCCccccccC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIEGKVEAWDPRM-KVKAGTLDCAFNCISNERDTEEKEGKAS 160 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~DGtV~iWD~Rs-~~~i~~L~~~~~~v~~~~~i~gl~GtRs 160 (358)
...+ ..+...|++|+|+|++. +|++|+.||+|++||+|+ +.++.++..|...+
T Consensus 270 -------~~~~----~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v-------------- 324 (430)
T 2xyi_A 270 -------SHTV----DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEI-------------- 324 (430)
T ss_dssp -------SEEE----ECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCE--------------
T ss_pred -------eeEe----ecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCE--------------
Confidence 0011 12236899999999886 899999999999999998 56788998887776
Q ss_pred CCceeeEEcCCCC-EEEE--ec-ceEEEECCC
Q psy2085 161 SDESSEEEEEEEE-EEES--SD-DDQAWTKEI 188 (358)
Q Consensus 161 ~~P~sI~fs~d~~-~llS--aD-~IKIWD~~t 188 (358)
.+|+|+|++. .|+| .| .|+|||+.+
T Consensus 325 ---~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 325 ---FQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp ---EEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred ---EEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 8899999996 4665 47 999999986
No 80
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.63 E-value=8.2e-15 Score=141.76 Aligned_cols=161 Identities=14% Similarity=0.096 Sum_probs=109.6
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEE-----EEeeCCCCEeEEEEcCCC-CEEEEEEecCCeEEEEEcC
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELI-----QDFEMPGVSTSVRISPDG-QYVLSTGIYKPRVRCYETD 76 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeli-----qdfe~~~~v~~v~~SpDG-~~LlatG~~d~~IrvwDl~ 76 (358)
.+..++ .|+.+..|+ ....+.+ .++ .--.|...|++++|+|+| ++ +++|+.++.|+|||+.
T Consensus 190 ~~l~s~-~d~~i~iwd~~~~~~~~----------~~~~~~~~~~~~~~~~v~~~~~~p~~~~~-l~s~~~dg~i~iwd~~ 257 (447)
T 3dw8_B 190 ETYLSA-DDLRINLWHLEITDRSF----------NIVDIKPANMEELTEVITAAEFHPNSCNT-FVYSSSKGTIRLCDMR 257 (447)
T ss_dssp SEEEEE-CSSEEEEEETTEEEEEE----------EEEECCCSSGGGCCCCEEEEEECSSCTTE-EEEEETTSCEEEEETT
T ss_pred CEEEEe-CCCeEEEEECCCCCcee----------eeeecccccccccCcceEEEEECCCCCcE-EEEEeCCCeEEEEECc
Confidence 355666 789999998 3222111 111 111467889999999999 65 5788899999999998
Q ss_pred CCce-----e-eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCC-CceeEEEeCCCCcccc-
Q psy2085 77 NLSM-----K-FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRM-KVKAGTLDCAFNCISN- 148 (358)
Q Consensus 77 ~lsl-----k-~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs-~~~i~~L~~~~~~v~~- 148 (358)
+... + +..+.+.... . .-..+...|++++|+|++.+|++|+. |+|++||+++ ++++.++.+|......
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l 333 (447)
T 3dw8_B 258 ASALCDRHSKLFEEPEDPSNR--S-FFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKL 333 (447)
T ss_dssp TCSSSCTTCEEECCC-----C--C-HHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTH
T ss_pred CCccccceeeEeccCCCcccc--c-cccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccc
Confidence 7542 1 1111100000 0 00001137999999999999999999 9999999998 8888889887543210
Q ss_pred --------ccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCcE
Q psy2085 149 --------ERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKKT 191 (358)
Q Consensus 149 --------~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~~ 191 (358)
.+.+ .+++|+|++.+|++ .| .|+|||+.+|+.
T Consensus 334 ~~~~~~~~i~~~-----------~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 334 CSLYENDCIFDK-----------FECCWNGSDSVVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp HHHHHTSGGGCC-----------CCEEECTTSSEEEEECSTTEEEEEETTTCCE
T ss_pred cccccccccccc-----------eEEEECCCCCEEEEeccCCEEEEEEcCCCcc
Confidence 0111 45999999999997 46 999999999883
No 81
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.63 E-value=1.3e-14 Score=136.39 Aligned_cols=153 Identities=8% Similarity=-0.037 Sum_probs=113.0
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe--eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF--EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf--e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.|.++++.++.+..|+ .... ...++..+ .|...+.+++|+|+|++| ++|+.++.|++||+....+
T Consensus 109 ~~l~~~~~d~~v~i~d~~~~~-----------~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~~~d~~~~~~ 176 (372)
T 1k8k_C 109 KKFAVGSGSRVISICYFEQEN-----------DWWVCKHIKKPIRSTVLSLDWHPNSVLL-AAGSCDFKCRIFSAYIKEV 176 (372)
T ss_dssp SEEEEEETTSSEEEEEEETTT-----------TEEEEEEECTTCCSCEEEEEECTTSSEE-EEEETTSCEEEEECCCTTT
T ss_pred CEEEEEeCCCEEEEEEecCCC-----------cceeeeeeecccCCCeeEEEEcCCCCEE-EEEcCCCCEEEEEcccccc
Confidence 4677888899999998 3221 11222233 367889999999999976 5677899999999753211
Q ss_pred eee-------e-eccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCC
Q psy2085 81 KFE-------R-CFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDT 152 (358)
Q Consensus 81 k~~-------r-~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i 152 (358)
... . ......+ ..+ ..+...|++++|+|++.+|++|+.||+|++||+++++++..+..+..++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v------ 247 (372)
T 1k8k_C 177 EERPAPTPWGSKMPFGELM--FES-SSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPL------ 247 (372)
T ss_dssp SCCCCCBTTBSCCCTTCEE--EEC-CCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCE------
T ss_pred cccccccccccccchhhhe--Eec-CCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCe------
Confidence 000 0 0000111 111 1333689999999999999999999999999999999999999887766
Q ss_pred CccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCC
Q psy2085 153 EEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEI 188 (358)
Q Consensus 153 ~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~t 188 (358)
.+++|+|++.+|++ .| .|+|||..+
T Consensus 248 -----------~~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 248 -----------LAVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp -----------EEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred -----------EEEEEecCCCEEEEEeCCeEEEEEccC
Confidence 78999999998887 56 999999988
No 82
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.63 E-value=1.3e-14 Score=138.47 Aligned_cols=135 Identities=10% Similarity=0.006 Sum_probs=98.9
Q ss_pred ceeEEEEee-CCCCEeEEEEcCCC-CEEEEEEecCCeEEEEEcCCCceeeeee---ccCceEEEEEeec-----------
Q psy2085 35 RIELIQDFE-MPGVSTSVRISPDG-QYVLSTGIYKPRVRCYETDNLSMKFERC---FDSEVVTFEILSD----------- 98 (358)
Q Consensus 35 rIeliqdfe-~~~~v~~v~~SpDG-~~LlatG~~d~~IrvwDl~~lslk~~r~---~d~e~v~f~~LS~----------- 98 (358)
..++++.+. |...|++++|+|+| ++| ++|+.++.|+|||+.+........ ....+ ....+++
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~l~s~~~ 139 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHPTHPTTV-AVGSKGGDIILWDYDVQNKTSFIQGMGPGDAI-TGMKFNQFNTNQLFVSSI 139 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECSSCTTEE-EEEEBTSCEEEEETTSTTCEEEECCCSTTCBE-EEEEEETTEEEEEEEEET
T ss_pred ccceEEeccCCCCCEEEEEECCCCCCEE-EEEcCCCeEEEEeCCCcccceeeecCCcCCce-eEEEeCCCCCCEEEEEeC
Confidence 456666664 78899999999999 655 778889999999998654332211 11222 1112222
Q ss_pred CCC---------------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCcccc
Q psy2085 99 DYS---------------------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEG 157 (358)
Q Consensus 99 D~s---------------------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~G 157 (358)
|.+ ..|.+++|+|++.+|++|+.||+|++||+ +++++..+..|...+
T Consensus 140 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v----------- 207 (383)
T 3ei3_B 140 RGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKV----------- 207 (383)
T ss_dssp TTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCE-----------
T ss_pred CCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcE-----------
Confidence 111 44888889988888888888999999998 466778888777766
Q ss_pred ccCCCceeeEEcCCCC-EEEE--ec-ceEEEECCCC
Q psy2085 158 KASSDESSEEEEEEEE-EEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 158 tRs~~P~sI~fs~d~~-~llS--aD-~IKIWD~~tG 189 (358)
.+|+|+|+++ .|++ .| +|+|||+.++
T Consensus 208 ------~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 237 (383)
T 3ei3_B 208 ------THAEFNPRCDWLMATSSVDATVKLWDLRNI 237 (383)
T ss_dssp ------EEEEECSSCTTEEEEEETTSEEEEEEGGGC
T ss_pred ------EEEEECCCCCCEEEEEeCCCEEEEEeCCCC
Confidence 8899999998 7776 46 9999999983
No 83
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.7e-15 Score=144.93 Aligned_cols=141 Identities=13% Similarity=0.153 Sum_probs=104.8
Q ss_pred ecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc--eeeeeec
Q psy2085 10 NWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS--MKFERCF 86 (358)
Q Consensus 10 ~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls--lk~~r~~ 86 (358)
+.++.+..|+ ..... .++++.+.++..|++++|+|||++| ++|+.++.|+|||+.... .+....
T Consensus 42 ~~d~~v~iw~~~~~~~-----------~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~v~vw~~~~~~~~~~~~~~- 108 (416)
T 2pm9_A 42 STDSSLELWSLLAADS-----------EKPIASLQVDSKFNDLDWSHNNKII-AGALDNGSLELYSTNEANNAINSMAR- 108 (416)
T ss_dssp CCCCCCEEEESSSGGG-----------CSCSCCCCCSSCEEEEEECSSSSCE-EEEESSSCEEEECCSSTTSCCCEEEE-
T ss_pred CCCCeEEEEEccCCCC-----------CcEEEEEecCCceEEEEECCCCCeE-EEEccCCeEEEeecccccccccchhh-
Confidence 7888999999 32221 1344455678899999999999987 567789999999998621 111111
Q ss_pred cCceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEeCCCeEEEEeCCCCc------eeEEE---eCCCCccccccCCCccc
Q psy2085 87 DSEVVTFEILSDDYSSELNSIAINPV-HQLICVGTIEGKVEAWDPRMKV------KAGTL---DCAFNCISNERDTEEKE 156 (358)
Q Consensus 87 d~e~v~f~~LS~D~s~~In~i~~np~-~~llasGs~DGtV~iWD~Rs~~------~i~~L---~~~~~~v~~~~~i~gl~ 156 (358)
+ ..+...|++++|+|+ +.+|++|+.||+|++||++++. ....+ ..|...+
T Consensus 109 ---------~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v---------- 168 (416)
T 2pm9_A 109 ---------F-SNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEV---------- 168 (416)
T ss_dssp ---------C-CCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCC----------
T ss_pred ---------c-cCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCe----------
Confidence 1 123368999999998 8999999999999999999886 32222 3344444
Q ss_pred cccCCCceeeEEcCC-CCEEEE--ec-ceEEEECCCCc
Q psy2085 157 GKASSDESSEEEEEE-EEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 157 GtRs~~P~sI~fs~d-~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+++|+|+ +..|++ .| .|+|||+.+++
T Consensus 169 -------~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 199 (416)
T 2pm9_A 169 -------ISLAWNQSLAHVFASAGSSNFASIWDLKAKK 199 (416)
T ss_dssp -------CEEEECSSCTTEEEEESSSSCEEEEETTTTE
T ss_pred -------eEEEeCCCCCcEEEEEcCCCCEEEEECCCCC
Confidence 78999999 677777 46 99999999887
No 84
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.62 E-value=3.6e-14 Score=130.94 Aligned_cols=137 Identities=9% Similarity=0.102 Sum_probs=108.2
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
.+.++++.++.+..|+.... ++++.+.++..+.+++|+|||++| ++|+.++.|++||+.+......
T Consensus 196 ~~l~~~~~dg~i~~~d~~~~-------------~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~~~~i~~~~~~~~~~~~~ 261 (337)
T 1gxr_A 196 TKLWTGGLDNTVRSWDLREG-------------RQLQQHDFTSQIFSLGYCPTGEWL-AVGMESSNVEVLHVNKPDKYQL 261 (337)
T ss_dssp SEEEEEETTSEEEEEETTTT-------------EEEEEEECSSCEEEEEECTTSSEE-EEEETTSCEEEEETTSSCEEEE
T ss_pred CEEEEEecCCcEEEEECCCC-------------ceEeeecCCCceEEEEECCCCCEE-EEEcCCCcEEEEECCCCCeEEE
Confidence 36778888888999983222 345566788899999999999987 5667899999999986532110
Q ss_pred eeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCc
Q psy2085 84 RCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDE 163 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P 163 (358)
..+...|.+++|+|++++|++|+.||+|++||+++++.+..+. +...+
T Consensus 262 --------------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~-~~~~v----------------- 309 (337)
T 1gxr_A 262 --------------HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSV----------------- 309 (337)
T ss_dssp --------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCE-----------------
T ss_pred --------------cCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEec-CCCcE-----------------
Confidence 1223679999999999999999999999999999998885554 33444
Q ss_pred eeeEEcCCCCEEEE--ec-ceEEEEC
Q psy2085 164 SSEEEEEEEEEEES--SD-DDQAWTK 186 (358)
Q Consensus 164 ~sI~fs~d~~~llS--aD-~IKIWD~ 186 (358)
.++.|+|++++|++ .| .|+|||+
T Consensus 310 ~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 310 LSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEEEECCCCCEEEEecCCCeEEEEEE
Confidence 78999999999986 46 9999996
No 85
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.62 E-value=3.9e-14 Score=132.11 Aligned_cols=170 Identities=12% Similarity=0.019 Sum_probs=104.1
Q ss_pred EEEEeecC-----Cceeeee-eccCcccCCCcccccceeEEEEeeCCC--CEeEEEEcCCCCEEEEEEecCCeEEEEEcC
Q psy2085 5 YCYQTNWH-----KQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPG--VSTSVRISPDGQYVLSTGIYKPRVRCYETD 76 (358)
Q Consensus 5 ~~~~~~~~-----~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~--~v~~v~~SpDG~~LlatG~~d~~IrvwDl~ 76 (358)
|.+.++.+ +.+..|+ ........-.......+..+. .+++ .+.+++|+|+|++| ++|+.++.|++||+.
T Consensus 129 ~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l-~~~~~dg~i~i~d~~ 205 (369)
T 3zwl_B 129 YFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKII--THEGLDAATVAGWSTKGKYI-IAGHKDGKISKYDVS 205 (369)
T ss_dssp EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEE--CCTTCCCEEEEEECGGGCEE-EEEETTSEEEEEETT
T ss_pred EEEEecCCccCCCCEEEEEEecCCccceeecccccceeeecc--CCcCccceeEEEEcCCCCEE-EEEcCCCEEEEEECC
Confidence 55566666 7888888 322211111111111222222 2333 89999999999987 567789999999998
Q ss_pred CC-ceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeC--CC--------Cc
Q psy2085 77 NL-SMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDC--AF--------NC 145 (358)
Q Consensus 77 ~l-slk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~--~~--------~~ 145 (358)
+. .... . + ..+...|.+++|+|++.+|++|+.||.|++||+++++.+..+.. .. ..
T Consensus 206 ~~~~~~~--~----------~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (369)
T 3zwl_B 206 NNYEYVD--S----------I-DLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKE 272 (369)
T ss_dssp TTTEEEE--E----------E-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSS
T ss_pred CCcEeEE--E----------E-ecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCc
Confidence 62 2111 0 0 11226789999999999999999999999999998887655531 10 00
Q ss_pred -cccccCCCc--------------cc------cc------cCCCc-eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 146 -ISNERDTEE--------------KE------GK------ASSDE-SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 146 -v~~~~~i~g--------------l~------Gt------Rs~~P-~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+.......+ +. |. .+..+ .+++|+|++++|+| .| .|+|||+.++.
T Consensus 273 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 273 FIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp EEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHH
T ss_pred eEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECcccc
Confidence 000000000 00 11 01112 88999999999997 46 99999998654
No 86
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.62 E-value=3e-14 Score=132.98 Aligned_cols=107 Identities=9% Similarity=0.039 Sum_probs=80.0
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.|.++++.++.+..|+.... ++++.+. |...|++++|+| +|++| ++|+.+++|+|||+.+....
T Consensus 86 ~~l~~~~~dg~i~v~d~~~~-------------~~~~~~~~~~~~i~~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~ 151 (366)
T 3k26_A 86 PLLAVAGSRGIIRIINPITM-------------QCIKHYVGHGNAINELKFHPRDPNLL-LSVSKDHALRLWNIQTDTLV 151 (366)
T ss_dssp EEEEEEETTCEEEEECTTTC-------------CEEEEEESCCSCEEEEEECSSCTTEE-EEEETTSCEEEEETTTTEEE
T ss_pred CEEEEecCCCEEEEEEchhc-------------eEeeeecCCCCcEEEEEECCCCCCEE-EEEeCCCeEEEEEeecCeEE
Confidence 47888999999999983221 2344554 888999999999 88866 67788999999999865322
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKV 134 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~ 134 (358)
..... ...+...|.+++|+|++.+|++|+.||+|++||+++++
T Consensus 152 ~~~~~----------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 152 AIFGG----------VEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKR 194 (366)
T ss_dssp EEECS----------TTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHH
T ss_pred EEecc----------cccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCc
Confidence 11100 01233679999999999999999999999999998654
No 87
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.62 E-value=4.4e-14 Score=138.35 Aligned_cols=159 Identities=16% Similarity=0.217 Sum_probs=103.0
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|.++++.|+++..|+-... ++++.+. |.+.|.+++|+|++ ++++|+.|++|+|||+.+.....
T Consensus 133 ~~l~sgs~dg~i~vwd~~~~-------------~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~~~~~ 197 (464)
T 3v7d_B 133 NYVITGADDKMIRVYDSINK-------------KFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKGCCTH 197 (464)
T ss_dssp TEEEEEETTSCEEEEETTTT-------------EEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEEEEETTTTEEEE
T ss_pred CEEEEEcCCCcEEEEECCCC-------------cEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCCCcEEE
Confidence 47889999999999993222 2445554 88999999999999 45788899999999998653221
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEc--CCCCEEEEEeCCCeEEEEeCCCCce-----------------------eE
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAIN--PVHQLICVGTIEGKVEAWDPRMKVK-----------------------AG 137 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~n--p~~~llasGs~DGtV~iWD~Rs~~~-----------------------i~ 137 (358)
. . ..+.+.|++++|+ |++.+|++|+.||+|++||++++.. +.
T Consensus 198 ~--~-----------~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (464)
T 3v7d_B 198 V--F-----------EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVG 264 (464)
T ss_dssp E--E-----------CCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEE
T ss_pred E--E-----------CCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEE
Confidence 1 0 1122556666666 3556677777777777777665542 33
Q ss_pred EEeCCCCccccc---------cCCCcc-c------cc-----c-CCCc-eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 138 TLDCAFNCISNE---------RDTEEK-E------GK-----A-SSDE-SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 138 ~L~~~~~~v~~~---------~~i~gl-~------Gt-----R-s~~P-~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+.+|...+... ...++. . |. . +..+ .++.|+|+++.|++ .| +|+|||+.+|+
T Consensus 265 ~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 265 VLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp EECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred EccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 444554443211 000100 0 11 0 1111 88999999999997 46 99999999988
No 88
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.62 E-value=6.8e-15 Score=147.65 Aligned_cols=143 Identities=13% Similarity=0.172 Sum_probs=108.6
Q ss_pred eEEEEeec-CCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNW-HKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~-~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+...++. ++.+..|+-...+ +.. +.+ .|...|++++|||||++| ++|+.++.|+|||+.+....
T Consensus 457 ~~l~~~~~~d~~i~~~~~~~~~-----------~~~-~~~~~~~~~v~~~~~s~~g~~l-~~~~~dg~i~iw~~~~~~~~ 523 (615)
T 1pgu_A 457 NYVAVGLEEGNTIQVFKLSDLE-----------VSF-DLKTPLRAKPSYISISPSETYI-AAGDVMGKILLYDLQSREVK 523 (615)
T ss_dssp SEEEEEETTTSCEEEEETTEEE-----------EEE-ECSSCCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTTEEE
T ss_pred CEEEEeecCCCeEEEEECCCcc-----------ccc-cccCCccCceEEEEECCCCCEE-EEcCCCCeEEEeeCCCCcce
Confidence 45666777 8888888822110 111 222 367889999999999987 56778999999999875332
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcC----------CCCEEEEEeCCCeEEEEeCCCC-ceeEEEeCCCCcccccc
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINP----------VHQLICVGTIEGKVEAWDPRMK-VKAGTLDCAFNCISNER 150 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np----------~~~llasGs~DGtV~iWD~Rs~-~~i~~L~~~~~~v~~~~ 150 (358)
. .. ...+...|++++|+| ++.+||+|+.||+|++||+.++ +++..+.+|...+
T Consensus 524 ~--~~----------~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v---- 587 (615)
T 1pgu_A 524 T--SR----------WAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGV---- 587 (615)
T ss_dssp E--CC----------SCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCE----
T ss_pred e--Ee----------ecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccce----
Confidence 1 11 001236899999999 9999999999999999999998 7888888888777
Q ss_pred CCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCC
Q psy2085 151 DTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 151 ~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG 189 (358)
.+|+|+|++. |+| .| +|+|||+.++
T Consensus 588 -------------~~l~~s~~~~-l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 588 -------------NNLLWETPST-LVSSGADACIKRWNVVLE 615 (615)
T ss_dssp -------------EEEEEEETTE-EEEEETTSCEEEEEEC--
T ss_pred -------------EEEEEcCCCC-eEEecCCceEEEEeeecC
Confidence 8899999999 886 46 9999998753
No 89
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.62 E-value=4.8e-15 Score=144.32 Aligned_cols=165 Identities=7% Similarity=-0.030 Sum_probs=101.0
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcC--------CCCEEEEEEecCCeEEEEE
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISP--------DGQYVLSTGIYKPRVRCYE 74 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~Sp--------DG~~LlatG~~d~~IrvwD 74 (358)
.++-++|.|+++..|+-..+. .....++..+. |.+.|++|+|+| ||++| |||+.|++|+|||
T Consensus 102 ~~las~~~d~~v~lw~~~~~~--------~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~l-as~s~D~tv~~Wd 172 (393)
T 4gq1_A 102 LFLACVCQDNTVRLIITKNET--------IITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVI-ASVGDDCTLIIWR 172 (393)
T ss_dssp EEEEEEETTSCEEEEEEETTE--------EEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEE-EEEETTSEEEEEE
T ss_pred CEEEEEeCCCcEEEEECCCCc--------cceeeeecccCCCCCceEEEEEccccccccCCCCCEE-EEEECCCeEEEEE
Confidence 367889999999999932220 00112233333 778999999998 88765 7888999999999
Q ss_pred cCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeEEEeCCCCccc-cccCC
Q psy2085 75 TDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIEGKVEAWDPRMKVKAGTLDCAFNCIS-NERDT 152 (358)
Q Consensus 75 l~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~-~~~~i 152 (358)
+.+..... .+ + .+...|.+|+|+|++. +|++|+.||+|++||+++++....+..+..... ..+..
T Consensus 173 ~~~~~~~~---------~~--~--~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~ 239 (393)
T 4gq1_A 173 LTDEGPIL---------AG--Y--PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTL 239 (393)
T ss_dssp EETTEEEE---------EE--E--ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEE
T ss_pred CCCCceee---------ee--c--CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEec
Confidence 97542110 00 1 1126789999999874 899999999999999999987655543221110 00000
Q ss_pred Cc--cc--cc--cCCCc-eeeEEc-CCCCEEEE--ec-ceEEEECCCCc
Q psy2085 153 EE--KE--GK--ASSDE-SSEEEE-EEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 153 ~g--l~--Gt--Rs~~P-~sI~fs-~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.. .. .. .+... .++.|+ +++..|++ .| +++|||+.+++
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~ 288 (393)
T 4gq1_A 240 NTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANN 288 (393)
T ss_dssp ESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC----
T ss_pred ccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCC
Confidence 00 00 00 01111 678886 79999997 46 99999998776
No 90
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.61 E-value=8.7e-15 Score=139.20 Aligned_cols=136 Identities=10% Similarity=0.115 Sum_probs=101.2
Q ss_pred ccceeEEEEeeCCCCEeEEEEcCCCC-EEEEEEecCCeEEEEEc----CCCceeeeeeccCceEEEEE-ee-----cCCC
Q psy2085 33 RRRIELIQDFEMPGVSTSVRISPDGQ-YVLSTGIYKPRVRCYET----DNLSMKFERCFDSEVVTFEI-LS-----DDYS 101 (358)
Q Consensus 33 ~~rIeliqdfe~~~~v~~v~~SpDG~-~LlatG~~d~~IrvwDl----~~lslk~~r~~d~e~v~f~~-LS-----~D~s 101 (358)
+..+..++...+.+.|++++|+|||+ +| ++|+.++.|+|||+ .+....+.-. ....+.. +. ..+.
T Consensus 33 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 108 (425)
T 1r5m_A 33 DGFVKILKEIVKLDNIVSSTWNPLDESIL-AYGEKNSVARLARIVETDQEGKKYWKLT---IIAELRHPFALSASSGKTT 108 (425)
T ss_dssp -CCCEECEEEEECSCCSEEEECSSCTTEE-EEEETBTEEEEEEEEEC------CEEEE---EEEEEECCCCCC------C
T ss_pred hhhhhheeeeeccCceEEEEECCCCCcEE-EEecCCceEEEEEEecccCCcccccccc---ccccccccccccccccCCC
Confidence 44566777778889999999999999 66 67888999999999 6543100000 0000000 00 0122
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD 179 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD 179 (358)
+.|++++|+|++.+|++|+.||+|.+|| .++..+..+..|...+ .++.|+|++++|++ .|
T Consensus 109 ~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~~~~~d 170 (425)
T 1r5m_A 109 NQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPI-----------------VSVKWNKDGTHIISMDVE 170 (425)
T ss_dssp BCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCE-----------------EEEEECTTSSEEEEEETT
T ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccE-----------------EEEEECCCCCEEEEEecC
Confidence 5899999999999999999999999999 6788888998887776 88999999999987 46
Q ss_pred -ceEEEECCCCc
Q psy2085 180 -DDQAWTKEIKK 190 (358)
Q Consensus 180 -~IKIWD~~tG~ 190 (358)
.|++||+.+++
T Consensus 171 ~~i~iwd~~~~~ 182 (425)
T 1r5m_A 171 NVTILWNVISGT 182 (425)
T ss_dssp CCEEEEETTTTE
T ss_pred CeEEEEECCCCc
Confidence 99999999887
No 91
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.61 E-value=5.4e-15 Score=140.37 Aligned_cols=154 Identities=7% Similarity=-0.051 Sum_probs=108.8
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEee--CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFE--MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe--~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.+.++++.++.+..|+ .... ...+++.+. |...|++++|+|||++| ++|+.++.|++||+....+
T Consensus 113 ~~l~~~~~d~~i~iwd~~~~~-----------~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~ 180 (377)
T 3dwl_C 113 DKFAVGSGARVISVCYFEQEN-----------DWWVSKHLKRPLRSTILSLDWHPNNVLL-AAGCADRKAYVLSAYVRDV 180 (377)
T ss_dssp SCCEEEESSSCEEECCC----------------CCCCEEECSSCCSCEEEEEECTTSSEE-EEEESSSCEEEEEECCSSC
T ss_pred CEEEEEecCCeEEEEEECCcc-----------cceeeeEeecccCCCeEEEEEcCCCCEE-EEEeCCCEEEEEEEEeccc
Confidence 3567888889999998 3221 112333443 67889999999999976 6778899999999964321
Q ss_pred eeeeec--c-C--ceEE-EEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce----eEEEeCCCCcccccc
Q psy2085 81 KFERCF--D-S--EVVT-FEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK----AGTLDCAFNCISNER 150 (358)
Q Consensus 81 k~~r~~--d-~--e~v~-f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~----i~~L~~~~~~v~~~~ 150 (358)
...... . . ..-. ...+ .+...|++++|+|++++|++|+.||+|++||++++.+ +.++.+|...+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v---- 254 (377)
T 3dwl_C 181 DAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPL---- 254 (377)
T ss_dssp C-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCE----
T ss_pred CCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCce----
Confidence 110000 0 0 0000 1111 4447899999999999999999999999999999987 78888887776
Q ss_pred CCCccccccCCCceeeEEcCCCCEEEEe-c-ceEEEECCC
Q psy2085 151 DTEEKEGKASSDESSEEEEEEEEEEESS-D-DDQAWTKEI 188 (358)
Q Consensus 151 ~i~gl~GtRs~~P~sI~fs~d~~~llSa-D-~IKIWD~~t 188 (358)
.++.|+|++.+|+++ | .+.+|+...
T Consensus 255 -------------~~~~~s~~~~~l~~~~~~~~~~~~~~~ 281 (377)
T 3dwl_C 255 -------------RSLLWANESAIVAAGYNYSPILLQGNE 281 (377)
T ss_dssp -------------EEEEEEETTEEEEEESSSSEEEECCCC
T ss_pred -------------EEEEEcCCCCEEEEEcCCcEEEEEeCC
Confidence 889999999999874 5 666887764
No 92
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.61 E-value=6.7e-15 Score=150.76 Aligned_cols=154 Identities=10% Similarity=-0.048 Sum_probs=108.7
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.+..++|.|+++..|+-.......... . .-.+.+..+ .+...|++++|+|++ . +++|+.|++|++||+.+....
T Consensus 226 ~~LAs~s~DgtvrlWd~~~~~~~~~~~-~-~~~~p~~~l~~h~~~v~sv~~s~~~-~-lasgs~DgtV~lWD~~~~~~~- 300 (524)
T 2j04_B 226 GCLSFVSQEGTINFLEIIDNATDVHVF-K-MCEKPSLTLSLADSLITTFDFLSPT-T-VVCGFKNGFVAEFDLTDPEVP- 300 (524)
T ss_dssp CEEEEEETTSCEEEEECCCCSSSSSEE-E-CCCSCSEEECCTTTCEEEEEESSSS-E-EEEEETTSEEEEEETTBCSSC-
T ss_pred ceEEEEecCCeEEEEEcCCCccccccc-e-eecCceEEEEcCCCCEEEEEecCCC-e-EEEEeCCCEEEEEECCCCCCc-
Confidence 478899999999999922111100000 0 000112233 366889999999976 4 578999999999999853210
Q ss_pred eeeccCceEEEEEeecCCCCCeeEE--EEcCCC-CEEEEEeCCCeEEEEeCCCCceeEEEeCCCC--ccccccCCCcccc
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSI--AINPVH-QLICVGTIEGKVEAWDPRMKVKAGTLDCAFN--CISNERDTEEKEG 157 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i--~~np~~-~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~--~v~~~~~i~gl~G 157 (358)
...+ ..++..|++| +|+|++ ++|||||.||+|++||+|+++++.++.+|.. .+
T Consensus 301 -------~~~~----~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v----------- 358 (524)
T 2j04_B 301 -------SFYD----QVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNL----------- 358 (524)
T ss_dssp -------SEEE----ECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSC-----------
T ss_pred -------eEEe----ecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcc-----------
Confidence 0000 1223679999 568887 8999999999999999999988877776543 12
Q ss_pred ccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 158 KASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 158 tRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
.+|+|+|++..++++ | +|+|||++++.
T Consensus 359 ------~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~ 388 (524)
T 2j04_B 359 ------VPVVYCPQIYSYIYSDGASSLRAVPSRAAF 388 (524)
T ss_dssp ------CCEEEETTTTEEEEECSSSEEEEEETTCTT
T ss_pred ------cceEeCCCcCeEEEeCCCCcEEEEECcccc
Confidence 679999999988873 5 99999999876
No 93
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.61 E-value=3.2e-15 Score=148.95 Aligned_cols=130 Identities=11% Similarity=0.093 Sum_probs=96.2
Q ss_pred EeeCCCCEeEEEEcCCCCEEEE---EEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-CCEE
Q psy2085 41 DFEMPGVSTSVRISPDGQYVLS---TGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV-HQLI 116 (358)
Q Consensus 41 dfe~~~~v~~v~~SpDG~~Lla---tG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~-~~ll 116 (358)
.+.+++.|++++|+|||++|++ +|+.+++|+|||+.+......+ ....+........|...|++|+|+|+ +.+|
T Consensus 88 ~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~--~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l 165 (434)
T 2oit_A 88 LVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQ--QKRPFAYHKLLKDAGGMVIDMKWNPTVPSMV 165 (434)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCS--SCCCSEEEECCCSGGGSEEEEEECSSCTTEE
T ss_pred cccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcC--CcceeeeeeccCCCCCceEEEEECCCCCCEE
Confidence 3556788999999999999876 7888999999998643000000 00000001111223368999999998 7899
Q ss_pred EEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 117 CVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 117 asGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|+|+.||+|++||++++..+....+|...+ .+++|+|+|++|++ .| +|+|||.+ |+
T Consensus 166 as~s~Dg~v~iwD~~~~~~~~~~~~~~~~v-----------------~~v~wspdg~~lasgs~dg~v~iwd~~-~~ 224 (434)
T 2oit_A 166 AVCLADGSIAVLQVTETVKVCATLPSTVAV-----------------TSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ 224 (434)
T ss_dssp EEEETTSCEEEEEESSSEEEEEEECGGGCE-----------------EEEEECTTSSCEEEEETTSCEEEECTT-CC
T ss_pred EEEECCCeEEEEEcCCCcceeeccCCCCce-----------------eEEEEcCCCCEEEEEcCCCcEEEEccC-Cc
Confidence 999999999999999997766666665555 88999999999986 46 99999998 54
No 94
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.61 E-value=2.9e-14 Score=135.55 Aligned_cols=154 Identities=12% Similarity=0.082 Sum_probs=113.2
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|.++++.++.+..|+. .. ++++.+. |...|.+++|+|+|++|+ +|+.++.|++||+.+.....
T Consensus 121 ~~l~~~~~dg~i~i~~~-~~-------------~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 121 NSIVTGVENGELRLWNK-TG-------------ALLNVLNFHRAPIVSVKWNKDGTHII-SMDVENVTILWNVISGTVMQ 185 (425)
T ss_dssp SEEEEEETTSCEEEEET-TS-------------CEEEEECCCCSCEEEEEECTTSSEEE-EEETTCCEEEEETTTTEEEE
T ss_pred CEEEEEeCCCeEEEEeC-CC-------------CeeeeccCCCccEEEEEECCCCCEEE-EEecCCeEEEEECCCCcEEE
Confidence 46778888888888871 11 2333443 778899999999999875 66789999999998653321
Q ss_pred eeeccCc----------------eE--E------EEEee-------------------cCCCCCeeEEEEcCCCCEEEEE
Q psy2085 83 ERCFDSE----------------VV--T------FEILS-------------------DDYSSELNSIAINPVHQLICVG 119 (358)
Q Consensus 83 ~r~~d~e----------------~v--~------f~~LS-------------------~D~s~~In~i~~np~~~llasG 119 (358)
....... +. . +...+ ..+...|++++|+|++.+|++|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 265 (425)
T 1r5m_A 186 HFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSA 265 (425)
T ss_dssp EECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEE
T ss_pred EeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEE
Confidence 1110000 00 0 00000 1123689999999999999999
Q ss_pred eCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 120 TIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 120 s~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+.||+|++||+++++.+..+..|...+ .++.|+|++ .|++ .| .|+|||+.+++
T Consensus 266 ~~d~~i~i~d~~~~~~~~~~~~~~~~i-----------------~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~ 321 (425)
T 1r5m_A 266 SDDGTLRIWHGGNGNSQNCFYGHSQSI-----------------VSASWVGDD-KVISCSMDGSVRLWSLKQNT 321 (425)
T ss_dssp ETTSCEEEECSSSBSCSEEECCCSSCE-----------------EEEEEETTT-EEEEEETTSEEEEEETTTTE
T ss_pred cCCCEEEEEECCCCccceEecCCCccE-----------------EEEEECCCC-EEEEEeCCCcEEEEECCCCc
Confidence 999999999999999999998777766 789999999 7775 46 99999999887
No 95
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.61 E-value=9.3e-15 Score=136.30 Aligned_cols=119 Identities=13% Similarity=0.212 Sum_probs=96.3
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEec---CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC---CCEE
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIY---KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV---HQLI 116 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~---d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~---~~ll 116 (358)
.|...|.+++|+|+|..++++|+. ++.|+|||+.+........ + .+...|++++|+|+ +.+|
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~----------~--~~~~~v~~~~~~~~~~~~~~l 83 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLRE----------I--EKAKPIKCGTFGATSLQQRYL 83 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEE----------E--EESSCEEEEECTTCCTTTCCE
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceee----------e--cccCcEEEEEEcCCCCCCceE
Confidence 388999999999999989889887 8999999998654321111 0 11268999999998 6999
Q ss_pred EEEeCCCeEEEEeCCCCc-eeEEEeCCCCccccccCCCccccccCCCceee------EEcCCCCEEEE--ec-ceEEEEC
Q psy2085 117 CVGTIEGKVEAWDPRMKV-KAGTLDCAFNCISNERDTEEKEGKASSDESSE------EEEEEEEEEES--SD-DDQAWTK 186 (358)
Q Consensus 117 asGs~DGtV~iWD~Rs~~-~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI------~fs~d~~~llS--aD-~IKIWD~ 186 (358)
++|+.||+|++||++++. ++..+.+|...+ .++ +|+|+++.|++ .| .|+|||+
T Consensus 84 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~ 146 (357)
T 3i2n_A 84 ATGDFGGNLHIWNLEAPEMPVYSVKGHKEII-----------------NAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDP 146 (357)
T ss_dssp EEEETTSCEEEECTTSCSSCSEEECCCSSCE-----------------EEEEEESGGGCC-CCCEEEEEETTSCEEEECT
T ss_pred EEecCCCeEEEEeCCCCCccEEEEEecccce-----------------EEEeeccccccCCCccEEEEEeCCCeEEEEeC
Confidence 999999999999999988 888998888776 556 45789999997 46 9999999
Q ss_pred CCCc
Q psy2085 187 EIKK 190 (358)
Q Consensus 187 ~tG~ 190 (358)
.+++
T Consensus 147 ~~~~ 150 (357)
T 3i2n_A 147 RQKD 150 (357)
T ss_dssp TSCS
T ss_pred CCCC
Confidence 9876
No 96
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.61 E-value=1.1e-14 Score=152.01 Aligned_cols=138 Identities=14% Similarity=0.197 Sum_probs=85.1
Q ss_pred ceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC------------
Q psy2085 35 RIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS------------ 101 (358)
Q Consensus 35 rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s------------ 101 (358)
|+++.+.|. |++.|.+++|||||++| ++|+.++.|+|||+.+......-..+...+....++++..
T Consensus 2 ~l~~~~~~~~h~~~v~~i~~sp~~~~l-a~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 80 (814)
T 3mkq_A 2 KLDIKKTFSNRSDRVKGIDFHPTEPWV-LTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (814)
T ss_dssp CCCCEEEEEEECSCEEEEEECSSSSEE-EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred CcccceeeecCCCceEEEEECCCCCEE-EEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEE
Confidence 345566665 88999999999999987 5677899999999987533211111111111111111111
Q ss_pred -----------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCC-ceeEEEeCCCCccccccCCCccccccCCCc
Q psy2085 102 -----------------SELNSIAINPVHQLICVGTIEGKVEAWDPRMK-VKAGTLDCAFNCISNERDTEEKEGKASSDE 163 (358)
Q Consensus 102 -----------------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~-~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P 163 (358)
+.|.+++|+|++++|++|+.||+|++||++++ .....+.+|...+
T Consensus 81 vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v----------------- 143 (814)
T 3mkq_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFV----------------- 143 (814)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCE-----------------
T ss_pred EEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcE-----------------
Confidence 34555555555555555555555555555544 3344444444443
Q ss_pred eeeEEcC-CCCEEEE--ec-ceEEEECCCCc
Q psy2085 164 SSEEEEE-EEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 164 ~sI~fs~-d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.++.|+| ++..|++ .| +|++||+.+++
T Consensus 144 ~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~ 174 (814)
T 3mkq_A 144 MCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (814)
T ss_dssp EEEEEETTEEEEEEEEETTSEEEEEETTCSS
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 8899999 7878886 46 99999998776
No 97
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.60 E-value=1.1e-14 Score=143.16 Aligned_cols=122 Identities=10% Similarity=-0.009 Sum_probs=89.2
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEeC
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGTI 121 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs~ 121 (358)
.|...|+||+|+|++..++|+|+.|++|+|||+......... -...|++.|++|+|+| ++.+|+|||.
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~-----------~~~gH~~~V~~l~f~p~~~~~l~s~s~ 185 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFI-----------KGIGAGGSITGLKFNPLNTNQFYASSM 185 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEE-----------CCCSSSCCCCEEEECSSCTTEEEEECS
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEE-----------EccCCCCCEEEEEEeCCCCCEEEEEeC
Confidence 366789999999965556689999999999999754321110 0123447899999998 5789999999
Q ss_pred CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 122 EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
||+|++||++++........+...+. + .++.|+|++.+|+++ | +|+|||+....
T Consensus 186 D~~v~iwd~~~~~~~~~~~~~~~~~~----~-----------~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~ 242 (435)
T 4e54_B 186 EGTTRLQDFKGNILRVFASSDTINIW----F-----------CSLDVSASSRMVVTGDNVGNVILLNMDGKE 242 (435)
T ss_dssp SSCEEEEETTSCEEEEEECCSSCSCC----C-----------CCEEEETTTTEEEEECSSSBEEEEESSSCB
T ss_pred CCEEEEeeccCCceeEEeccCCCCcc----E-----------EEEEECCCCCEEEEEeCCCcEeeeccCcce
Confidence 99999999987654333332222111 1 679999999999974 5 99999987543
No 98
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.60 E-value=2.7e-14 Score=156.82 Aligned_cols=143 Identities=17% Similarity=0.207 Sum_probs=115.9
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..+++.++++..|+-... +.++.+ .|.+.|.+++|||||++| ++|+.+++|+|||+.+.....
T Consensus 628 ~~l~s~~~d~~i~vw~~~~~-------------~~~~~~~~h~~~v~~~~~s~~~~~l-~s~~~d~~v~vwd~~~~~~~~ 693 (1249)
T 3sfz_A 628 QRIASCGADKTLQVFKAETG-------------EKLLDIKAHEDEVLCCAFSSDDSYI-ATCSADKKVKIWDSATGKLVH 693 (1249)
T ss_dssp SEEEEEETTSCEEEEETTTC-------------CEEEEECCCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTCCEEE
T ss_pred CEEEEEeCCCeEEEEECCCC-------------CEEEEeccCCCCEEEEEEecCCCEE-EEEeCCCeEEEEECCCCceEE
Confidence 46788899999999993222 133444 378899999999999987 567789999999998754321
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcC--CCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINP--VHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKAS 160 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np--~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs 160 (358)
. . ..+...|++++|+| ++.++++|+.||+|++||++++.++.++.+|...+
T Consensus 694 ~--~-----------~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v-------------- 746 (1249)
T 3sfz_A 694 T--Y-----------DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSV-------------- 746 (1249)
T ss_dssp E--E-----------ECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCE--------------
T ss_pred E--E-----------cCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCE--------------
Confidence 1 1 12336899999999 55699999999999999999999999999988877
Q ss_pred CCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 161 SDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 161 ~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.++.|+|+++.|+| .| +|++||+.+++
T Consensus 747 ---~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~ 776 (1249)
T 3sfz_A 747 ---NHCRFSPDDELLASCSADGTLRLWDVRSAN 776 (1249)
T ss_dssp ---EEEEECSSTTEEEEEESSSEEEEEEGGGTE
T ss_pred ---EEEEEecCCCEEEEEECCCeEEEEeCCCCc
Confidence 88999999999997 46 99999999886
No 99
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.60 E-value=1.4e-14 Score=134.95 Aligned_cols=157 Identities=12% Similarity=0.082 Sum_probs=112.2
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCC-Ccee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDN-LSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~-lslk 81 (358)
.+.++++.++.+..|+ ..... ......-++++.+.++..+.+++|+|++ +++|+.++.|++||+.+ ....
T Consensus 113 ~~l~s~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~ 184 (342)
T 1yfq_A 113 DKLIAASWDGLIEVIDPRNYGD-----GVIAVKNLNSNNTKVKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDN 184 (342)
T ss_dssp TEEEEEETTSEEEEECHHHHTT-----BCEEEEESCSSSSSSCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCC
T ss_pred CEEEEEcCCCeEEEEccccccc-----ccccccCCeeeEEeeCCceEEEEecCCc---EEEEeCCCeEEEEECCcccccc
Confidence 4678899999999999 32100 0000001223345578899999999998 46678899999999987 4321
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEEeCCCC------ceeEEEeCCCCcccc---ccC
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGTIEGKVEAWDPRMK------VKAGTLDCAFNCISN---ERD 151 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs~DGtV~iWD~Rs~------~~i~~L~~~~~~v~~---~~~ 151 (358)
.... ...+...|++++|+| ++.+|++|+.||.|++||.+.+ +.+..+.+|...... ...
T Consensus 185 ~~~~-----------~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (342)
T 1yfq_A 185 GTIE-----------ESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYP 253 (342)
T ss_dssp CEEE-----------ECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCC
T ss_pred ceee-----------ecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeeccccccccccccee
Confidence 1111 112225799999999 9999999999999999999987 778888877541000 001
Q ss_pred CCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 152 TEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 152 i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+ .+++|+|++++|++ .| .|+|||+.+++
T Consensus 254 i-----------~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 254 V-----------NSIEFSPRHKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp E-----------EEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred E-----------EEEEEcCCCCEEEEecCCceEEEEcCccHh
Confidence 1 88999999999987 46 99999999987
No 100
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.60 E-value=2.4e-14 Score=139.14 Aligned_cols=153 Identities=15% Similarity=0.117 Sum_probs=112.6
Q ss_pred eEEEEeecCCceeeee-e--ccCcccCCCcccccceeEEEEee-----CCCCEeEEE--EcCCCCEEEEEEecCCeEEEE
Q psy2085 4 EYCYQTNWHKQAVTLV-I--IGGRYLLPTNDIRRRIELIQDFE-----MPGVSTSVR--ISPDGQYVLSTGIYKPRVRCY 73 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~--~~~r~lk~d~~~~~rIeliqdfe-----~~~~v~~v~--~SpDG~~LlatG~~d~~Irvw 73 (358)
.+.++++.|+.+..|+ + ...+.++ ..+...++.+. ....+.++. ++|||.+| ++|+.++.|++|
T Consensus 124 ~~l~s~s~dg~i~vwd~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~i~iw 197 (437)
T 3gre_A 124 DAFAVSSKDGQIIVLKVNHYQQESEVK-----FLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLL-VALTNLSRVIIF 197 (437)
T ss_dssp SEEEEEETTSEEEEEEEEEEEETTEEE-----EEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEE-EEEETTSEEEEE
T ss_pred CEEEEEeCCCEEEEEEeccccCCceee-----ccccceeEEEEccCcccccCceEEEEEEcCCCCEE-EEEeCCCeEEEE
Confidence 5788999999999998 3 2322211 11223555554 456788888 77899876 677889999999
Q ss_pred EcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEe-CCCCccccccCC
Q psy2085 74 ETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLD-CAFNCISNERDT 152 (358)
Q Consensus 74 Dl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~-~~~~~v~~~~~i 152 (358)
|+.+...... +-.+.+.+.|++++|+|++.+|++|+.||+|++||+++++++.++. .+..++
T Consensus 198 d~~~~~~~~~-----------~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v------ 260 (437)
T 3gre_A 198 DIRTLERLQI-----------IENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPI------ 260 (437)
T ss_dssp ETTTCCEEEE-----------EECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEE------
T ss_pred eCCCCeeeEE-----------EccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCce------
Confidence 9987543211 1111123689999999999999999999999999999999999886 454455
Q ss_pred CccccccCCCceeeEEc----CCCCEEEE--ec-ceEEEECCCCc
Q psy2085 153 EEKEGKASSDESSEEEE----EEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 153 ~gl~GtRs~~P~sI~fs----~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+|.|+ +++.+|++ .| +|+|||+.+|+
T Consensus 261 -----------~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 261 -----------THVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp -----------EEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred -----------EEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 678665 45778887 36 99999999988
No 101
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.60 E-value=5.3e-14 Score=130.53 Aligned_cols=132 Identities=12% Similarity=0.139 Sum_probs=101.7
Q ss_pred cceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC
Q psy2085 34 RRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV 112 (358)
Q Consensus 34 ~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~ 112 (358)
+++.|...+. |.+.|++|+|+|++..+++||+.|++|+|||+.+..... ......+ ..+...|++++|+|+
T Consensus 26 ~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~-------~~~~~~l-~~h~~~V~~~~~s~d 97 (340)
T 4aow_A 26 EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNY-------GIPQRAL-RGHSHFVSDVVISSD 97 (340)
T ss_dssp CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCS-------EEEEEEE-CCCSSCEEEEEECTT
T ss_pred CceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccc-------ceeeEEE-eCCCCCEEEEEECCC
Confidence 4556777774 899999999999853345788899999999998643211 0111111 234478999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCC
Q psy2085 113 HQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 113 ~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG 189 (358)
+.+|++|+.||.|++|+............+...+ ..+.+++++..|+| .| .+++||....
T Consensus 98 g~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~l~s~s~d~~~~~~d~~~~ 160 (340)
T 4aow_A 98 GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDV-----------------LSVAFSSDNRQIVSGSRDKTIKLWNTLGV 160 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE-----------------EEEEECTTSSCEEEEETTSCEEEECTTSC
T ss_pred CCEEEEEcccccceEEeecccceeeeecCCCCce-----------------eEEEEeecCccceeecCCCeEEEEEeCCC
Confidence 9999999999999999999998877777665554 66889999999987 46 9999999765
Q ss_pred c
Q psy2085 190 K 190 (358)
Q Consensus 190 ~ 190 (358)
.
T Consensus 161 ~ 161 (340)
T 4aow_A 161 C 161 (340)
T ss_dssp E
T ss_pred c
Confidence 4
No 102
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.60 E-value=5.5e-14 Score=146.82 Aligned_cols=154 Identities=19% Similarity=0.217 Sum_probs=110.5
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCC-cee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNL-SMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~l-slk 81 (358)
.+..+++.++.+..|+-..+ +.++.+. |++.|.+++|+|||++| ++|+.++.|+|||+.+. ...
T Consensus 68 ~~l~~~~~dg~i~vw~~~~~-------------~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~vw~~~~~~~~~ 133 (814)
T 3mkq_A 68 NWIIVGSDDFRIRVFNYNTG-------------EKVVDFEAHPDYIRSIAVHPTKPYV-LSGSDDLTVKLWNWENNWALE 133 (814)
T ss_dssp TEEEEEETTSEEEEEETTTC-------------CEEEEEECCSSCEEEEEECSSSSEE-EEEETTSEEEEEEGGGTSEEE
T ss_pred CEEEEEeCCCeEEEEECCCC-------------cEEEEEecCCCCEEEEEEeCCCCEE-EEEcCCCEEEEEECCCCceEE
Confidence 46778888999999983222 2344444 78899999999999987 57788999999999764 211
Q ss_pred --eeeeccCceEEEEEeec-----------CCC--------------------CCeeEEEEcC--CCCEEEEEeCCCeEE
Q psy2085 82 --FERCFDSEVVTFEILSD-----------DYS--------------------SELNSIAINP--VHQLICVGTIEGKVE 126 (358)
Q Consensus 82 --~~r~~d~e~v~f~~LS~-----------D~s--------------------~~In~i~~np--~~~llasGs~DGtV~ 126 (358)
+..|. .. +....++| |.+ ..|++++|+| ++.+|++|+.||+|+
T Consensus 134 ~~~~~~~-~~-v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~ 211 (814)
T 3mkq_A 134 QTFEGHE-HF-VMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIK 211 (814)
T ss_dssp EEEECCS-SC-EEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEE
T ss_pred EEEcCCC-Cc-EEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEE
Confidence 11111 11 11111122 110 5678888887 777888888888888
Q ss_pred EEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 127 AWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 127 iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+||+++++++.++.+|...+ ..+.|+|+++.|++ .| .|+|||..+++
T Consensus 212 ~~d~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 212 IWDYQTKSCVATLEGHMSNV-----------------SFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp EEETTTTEEEEEEECCSSCE-----------------EEEEECSSSSEEEEEETTSCEEEEETTTCS
T ss_pred EEECCCCcEEEEEcCCCCCE-----------------EEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 88888888777777776665 78999999999987 46 99999999877
No 103
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.59 E-value=2.4e-14 Score=131.62 Aligned_cols=129 Identities=15% Similarity=0.164 Sum_probs=93.7
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEA 127 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~i 127 (358)
+++|+||+++ ++|+|. |++|+|||+.+...... . -...+...|++|+|+|++++||+|+.||+|++
T Consensus 28 ~~~l~WS~~~--~lAvg~-D~tV~iWd~~tg~~~~~--~---------~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~i 93 (318)
T 4ggc_A 28 LNLVDWSSGN--VLAVAL-DNSVYLWSASSGDILQL--L---------QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQL 93 (318)
T ss_dssp CBCEEECTTS--EEEEEE-TTEEEEEETTTCCEEEE--E---------ECCSTTCCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ceEEEECCCC--EEEEEe-CCEEEEEECCCCCEEEE--E---------EecCCCCeEEEEEECCCCCEEEEEECCCcEEE
Confidence 5889999997 557775 88999999987543211 0 01223367999999999999999999999999
Q ss_pred EeCCCCceeEEEeCCCCccccc-cCCCccc-----cc-----------------cCCCc-eeeEEcCCCCEEEE--ec-c
Q psy2085 128 WDPRMKVKAGTLDCAFNCISNE-RDTEEKE-----GK-----------------ASSDE-SSEEEEEEEEEEES--SD-D 180 (358)
Q Consensus 128 WD~Rs~~~i~~L~~~~~~v~~~-~~i~gl~-----Gt-----------------Rs~~P-~sI~fs~d~~~llS--aD-~ 180 (358)
||+++++++..+.+|...+... .....+. |+ .+..+ ..+.|++++.+|+| .| +
T Consensus 94 w~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~ 173 (318)
T 4ggc_A 94 WDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNL 173 (318)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcc
Confidence 9999999999999887654221 0000000 11 01111 78899999999997 46 9
Q ss_pred eEEEECCCCc
Q psy2085 181 DQAWTKEIKK 190 (358)
Q Consensus 181 IKIWD~~tG~ 190 (358)
|+|||+.+|+
T Consensus 174 i~iwd~~~~~ 183 (318)
T 4ggc_A 174 VNVWPSAPGE 183 (318)
T ss_dssp EEEEESSCBT
T ss_pred eeEEECCCCc
Confidence 9999999876
No 104
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.59 E-value=2.9e-14 Score=147.60 Aligned_cols=143 Identities=6% Similarity=-0.049 Sum_probs=103.8
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCC-----CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPG-----VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~-----~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.-++|.++++..|+... ++..+++.. .+.+++|||||++| |+|+.|++|+|||+....+
T Consensus 100 LAs~s~dg~V~iwd~~~---------------~l~~l~~~~~~~~~sv~svafSPDG~~L-Asgs~DGtVkIWd~~~~~l 163 (588)
T 2j04_A 100 MAVLSNNGNVSVFKDNK---------------MLTNLDSKGNLSSRTYHCFEWNPIESSI-VVGNEDGELQFFSIRKNSE 163 (588)
T ss_dssp EEEEETTSCEEEEETTE---------------EEEECCCSSCSTTTCEEEEEECSSSSCE-EEEETTSEEEEEECCCCTT
T ss_pred EEEEeCCCcEEEEeCCc---------------eeeeccCCCccccccEEEEEEcCCCCEE-EEEcCCCEEEEEECCCCcc
Confidence 44678888899997211 555555322 59999999999987 6778999999999986432
Q ss_pred eeeeeccCceEEEEEe---ecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce---eEEEe-CCCCccccccCCC
Q psy2085 81 KFERCFDSEVVTFEIL---SDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK---AGTLD-CAFNCISNERDTE 153 (358)
Q Consensus 81 k~~r~~d~e~v~f~~L---S~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~---i~~L~-~~~~~v~~~~~i~ 153 (358)
. .........+ ..+|.+.|.+|+|+|++ +++|+.|++|++||+..+.. ..+|. +|...|
T Consensus 164 ~-----~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V------- 229 (588)
T 2j04_A 164 N-----TPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKI------- 229 (588)
T ss_dssp T-----CCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCC-------
T ss_pred c-----cccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcE-------
Confidence 0 0000011111 23344789999999999 77889999999999988774 35674 565555
Q ss_pred ccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCCCc
Q psy2085 154 EKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEIKK 190 (358)
Q Consensus 154 gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~tG~ 190 (358)
.+|+|+ |+.|+| +| +|++||..+++
T Consensus 230 ----------~svaFs--g~~LASa~~~tIkLWd~~~~~ 256 (588)
T 2j04_A 230 ----------TDLKIV--DYKVVLTCPGYVHKIDLKNYS 256 (588)
T ss_dssp ----------CCEEEE--TTEEEEECSSEEEEEETTTTE
T ss_pred ----------EEEEEE--CCEEEEEeCCeEEEEECCCCe
Confidence 789999 578886 57 99999999877
No 105
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.58 E-value=1e-13 Score=135.72 Aligned_cols=153 Identities=14% Similarity=0.084 Sum_probs=113.2
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEc--CCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRIS--PDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~S--pDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
+..+++.|+++..|+-... ++++.|. |...|.+++|+ |++++| ++|+.++.|++||+.+....
T Consensus 175 ~l~s~s~dg~i~vwd~~~~-------------~~~~~~~~h~~~v~~l~~~~~~~~~~l-~s~s~d~~i~vwd~~~~~~~ 240 (464)
T 3v7d_B 175 ILVSGSTDRTVRVWDIKKG-------------CCTHVFEGHNSTVRCLDIVEYKNIKYI-VTGSRDNTLHVWKLPKESSV 240 (464)
T ss_dssp EEEEEETTSCEEEEETTTT-------------EEEEEECCCSSCEEEEEEEESSSCEEE-EEEETTSCEEEEECCCCCCC
T ss_pred EEEEEeCCCCEEEEECCCC-------------cEEEEECCCCCccEEEEEecCCCCCEE-EEEcCCCcEEEeeCCCCccc
Confidence 7789999999999983222 2444554 78899999999 577765 67889999999999864311
Q ss_pred ------------------------eeeeccCceEE-------EEEeecC-------------------CCCCeeEEEEcC
Q psy2085 82 ------------------------FERCFDSEVVT-------FEILSDD-------------------YSSELNSIAINP 111 (358)
Q Consensus 82 ------------------------~~r~~d~e~v~-------f~~LS~D-------------------~s~~In~i~~np 111 (358)
........+.. +...+.| +...|.+++|+|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 320 (464)
T 3v7d_B 241 PDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDH 320 (464)
T ss_dssp ------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET
T ss_pred ccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcC
Confidence 00011111111 1111112 227899999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCC
Q psy2085 112 VHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEI 188 (358)
Q Consensus 112 ~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~t 188 (358)
++.+|++|+.||+|++||+++++++.++.+|...+ ..+.|+ +.+|+| .| +|+|||+.+
T Consensus 321 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v-----------------~~~~~~--~~~l~s~s~dg~v~vwd~~~ 381 (464)
T 3v7d_B 321 ERKRCISASMDTTIRIWDLENGELMYTLQGHTALV-----------------GLLRLS--DKFLVSAAADGSIRGWDAND 381 (464)
T ss_dssp TTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-----------------EEEEEC--SSEEEEEETTSEEEEEETTT
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcE-----------------EEEEEc--CCEEEEEeCCCcEEEEECCC
Confidence 99999999999999999999999999999888776 778897 467776 46 999999998
Q ss_pred Cc
Q psy2085 189 KK 190 (358)
Q Consensus 189 G~ 190 (358)
+.
T Consensus 382 ~~ 383 (464)
T 3v7d_B 382 YS 383 (464)
T ss_dssp CC
T ss_pred Cc
Confidence 77
No 106
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.58 E-value=7.6e-14 Score=137.04 Aligned_cols=160 Identities=9% Similarity=0.010 Sum_probs=113.7
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+.++++.++.+..|. ........ .......+..+ .|...+.+++|+|+|..++++|+.+++|+|||+......
T Consensus 142 ~~lat~~~dg~V~vwd~~~~~~~~~----~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 217 (430)
T 2xyi_A 142 CVIATKTPSSDVLVFDYTKHPSKPE----PSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKE 217 (430)
T ss_dssp EEEEEECSSSCEEEEEGGGSCSSCC----TTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBG
T ss_pred cEEEEECCCCcEEEEECCCcccccC----ccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCC
Confidence 4778889999999999 33211111 11122333344 477889999999999945578889999999999863210
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEEeCCCC---ceeEEEeCCCCccccccCCCcccc
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGTIEGKVEAWDPRMK---VKAGTLDCAFNCISNERDTEEKEG 157 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs~DGtV~iWD~Rs~---~~i~~L~~~~~~v~~~~~i~gl~G 157 (358)
...+.....-..+...|++|+|+| .+.+|++|+.||+|++||++++ .++..+..|...+
T Consensus 218 ------~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v----------- 280 (430)
T 2xyi_A 218 ------HRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV----------- 280 (430)
T ss_dssp ------GGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE-----------
T ss_pred ------CceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe-----------
Confidence 000000000112336899999999 6789999999999999999987 5677887777766
Q ss_pred ccCCCceeeEEcCCCC-EEEE--ec-ceEEEECCCCc
Q psy2085 158 KASSDESSEEEEEEEE-EEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 158 tRs~~P~sI~fs~d~~-~llS--aD-~IKIWD~~tG~ 190 (358)
++|+|+|++. .|++ .| +|+|||++++.
T Consensus 281 ------~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~ 311 (430)
T 2xyi_A 281 ------NCLSFNPYSEFILATGSADKTVALWDLRNLK 311 (430)
T ss_dssp ------EEEEECSSCTTEEEEEETTSEEEEEETTCTT
T ss_pred ------EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC
Confidence 8899999997 4555 46 99999998744
No 107
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.58 E-value=2.3e-13 Score=129.75 Aligned_cols=153 Identities=10% Similarity=0.032 Sum_probs=95.7
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeee
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERC 85 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~ 85 (358)
..+.+.++.+..|+.... ++++.+.....+.+++|+|||++|+++|+.+++|++||+.+........
T Consensus 5 ~vs~~~d~~v~v~d~~~~-------------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~ 71 (391)
T 1l0q_A 5 YIANSESDNISVIDVTSN-------------KVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP 71 (391)
T ss_dssp EEEETTTTEEEEEETTTT-------------EEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred EEEcCCCCEEEEEECCCC-------------eEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE
Confidence 345677889999983222 3555666677799999999999998888889999999998754322111
Q ss_pred ccCceEEEEEeecCCC-----------------------------CCeeEEEEcCCCCEE-EEEeCCCeEEEEeCCCCce
Q psy2085 86 FDSEVVTFEILSDDYS-----------------------------SELNSIAINPVHQLI-CVGTIEGKVEAWDPRMKVK 135 (358)
Q Consensus 86 ~d~e~v~f~~LS~D~s-----------------------------~~In~i~~np~~~ll-asGs~DGtV~iWD~Rs~~~ 135 (358)
.... +....+++|.. ..+.+++|+|+++.| ++++.||+|.+||+++++.
T Consensus 72 ~~~~-v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 150 (391)
T 1l0q_A 72 AGSS-PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV 150 (391)
T ss_dssp CSSS-EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCC-ccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 1111 11111111111 334555555555433 4444455555555555555
Q ss_pred eEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-E--ec-ceEEEECCCCc
Q psy2085 136 AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-S--SD-DDQAWTKEIKK 190 (358)
Q Consensus 136 i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-S--aD-~IKIWD~~tG~ 190 (358)
+..+..+.. |..+.|+|+++.|+ + .| .|++||+.+++
T Consensus 151 ~~~~~~~~~------------------~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~ 191 (391)
T 1l0q_A 151 INTVSVGRS------------------PKGIAVTPDGTKVYVANFDSMSISVIDTVTNS 191 (391)
T ss_dssp EEEEECCSS------------------EEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEecCCC------------------cceEEECCCCCEEEEEeCCCCEEEEEECCCCe
Confidence 444443322 27899999999884 5 35 99999999887
No 108
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.58 E-value=5.3e-14 Score=136.94 Aligned_cols=118 Identities=13% Similarity=0.053 Sum_probs=75.6
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.+..|+|.|+++..|+ .... .++.-+.+...+.+|+|+|++..++++|+.|++|+|||+.+.....
T Consensus 157 ~~las~s~D~tv~~Wd~~~~~-------------~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~ 223 (393)
T 4gq1_A 157 QVIASVGDDCTLIIWRLTDEG-------------PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAE 223 (393)
T ss_dssp EEEEEEETTSEEEEEEEETTE-------------EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC---
T ss_pred CEEEEEECCCeEEEEECCCCc-------------eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccc
Confidence 3678999999999999 3322 4556677889999999999998777899999999999998643221
Q ss_pred e--eeccC---ceEEE-------EEeecCCCCCeeEEEEc-CCCCEEEEEeCCCeEEEEeCCCCc
Q psy2085 83 E--RCFDS---EVVTF-------EILSDDYSSELNSIAIN-PVHQLICVGTIEGKVEAWDPRMKV 134 (358)
Q Consensus 83 ~--r~~d~---e~v~f-------~~LS~D~s~~In~i~~n-p~~~llasGs~DGtV~iWD~Rs~~ 134 (358)
. .+... ..... ......+...|.++.|+ |++..|++++.|++|++||++++.
T Consensus 224 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~ 288 (393)
T 4gq1_A 224 ENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANN 288 (393)
T ss_dssp -------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC----
T ss_pred cccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCC
Confidence 1 11100 00000 00112233567777775 677777888888888888776654
No 109
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.58 E-value=1.5e-13 Score=137.91 Aligned_cols=135 Identities=13% Similarity=0.072 Sum_probs=102.5
Q ss_pred EEEee-CCCC-EeEEEEcC--CCCEEEEEEecCCeEEEEEcCCC------ceeeeeec--cCceEEEEEeecC-------
Q psy2085 39 IQDFE-MPGV-STSVRISP--DGQYVLSTGIYKPRVRCYETDNL------SMKFERCF--DSEVVTFEILSDD------- 99 (358)
Q Consensus 39 iqdfe-~~~~-v~~v~~Sp--DG~~LlatG~~d~~IrvwDl~~l------slk~~r~~--d~e~v~f~~LS~D------- 99 (358)
++.|. |... |++++|+| ||++| ++|+.++.|+|||+.+. ..+..+.. ....+....++++
T Consensus 56 ~~~~~~h~~~~v~~~~~sp~~~~~~l-~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 134 (615)
T 1pgu_A 56 VVQFTGHGSSVVTTVKFSPIKGSQYL-CSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVV 134 (615)
T ss_dssp EEEECTTTTSCEEEEEECSSTTCCEE-EEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred ceEEecCCCceEEEEEECcCCCCCEE-EEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEe
Confidence 34443 7788 99999999 99987 57788999999999632 11111111 1112222222332
Q ss_pred ------------------------CCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeEEEeCCCC---ccccccC
Q psy2085 100 ------------------------YSSELNSIAINPVHQ-LICVGTIEGKVEAWDPRMKVKAGTLDCAFN---CISNERD 151 (358)
Q Consensus 100 ------------------------~s~~In~i~~np~~~-llasGs~DGtV~iWD~Rs~~~i~~L~~~~~---~v~~~~~ 151 (358)
+...|++++|+|++. +|++|+.||+|++||+++++.+..+..|.. .+
T Consensus 135 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v----- 209 (615)
T 1pgu_A 135 GEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFV----- 209 (615)
T ss_dssp ECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCE-----
T ss_pred ccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceE-----
Confidence 226799999999997 899999999999999999999999998876 65
Q ss_pred CCccccccCCCceeeEEcCC-CCEEEE--ec-ceEEEECCCCcE
Q psy2085 152 TEEKEGKASSDESSEEEEEE-EEEEES--SD-DDQAWTKEIKKT 191 (358)
Q Consensus 152 i~gl~GtRs~~P~sI~fs~d-~~~llS--aD-~IKIWD~~tG~~ 191 (358)
.+++|+|+ +++|++ .| .|+|||+.+|+.
T Consensus 210 ------------~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 241 (615)
T 1pgu_A 210 ------------RDVEFSPDSGEFVITVGSDRKISCFDGKSGEF 241 (615)
T ss_dssp ------------EEEEECSTTCCEEEEEETTCCEEEEETTTCCE
T ss_pred ------------EEEEECCCCCCEEEEEeCCCeEEEEECCCCCE
Confidence 78999999 999986 46 999999999883
No 110
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.58 E-value=3.2e-14 Score=154.27 Aligned_cols=121 Identities=8% Similarity=0.050 Sum_probs=99.1
Q ss_pred eeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCE
Q psy2085 36 IELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQL 115 (358)
Q Consensus 36 Ieliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~l 115 (358)
+..+..+.|+..|++++|+|||++| |+|+.|++|+|||..+....+. + .+...|++|+|+| +++
T Consensus 8 ~~~~~~~gh~~~V~~lafspdg~~l-Asgs~Dg~I~lw~~~~~~~~~~------------~--~~~~~V~~l~fsp-g~~ 71 (902)
T 2oaj_A 8 LAETNKYGMSSKPIAAAFDFTQNLL-AIATVTGEVHIYGQQQVEVVIK------------L--EDRSAIKEMRFVK-GIY 71 (902)
T ss_dssp EEEEEEEECSSCEEEEEEETTTTEE-EEEETTSEEEEECSTTCEEEEE------------C--SSCCCEEEEEEET-TTE
T ss_pred eccccccCCCCCcEEEEECCCCCEE-EEEeCCCEEEEEeCCCcEEEEE------------c--CCCCCEEEEEEcC-CCE
Confidence 3445557899999999999999976 7889999999999875432111 1 1226799999999 889
Q ss_pred EEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 116 ICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 116 lasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|++|+.||+|++||+++++++.++.. ...+ .+++|+|++++|++ .| +|+|||+.+++
T Consensus 72 L~S~s~D~~v~lWd~~~~~~~~~~~~-~~~V-----------------~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~ 131 (902)
T 2oaj_A 72 LVVINAKDTVYVLSLYSQKVLTTVFV-PGKI-----------------TSIDTDASLDWMLIGLQNGSMIVYDIDRDQ 131 (902)
T ss_dssp EEEEETTCEEEEEETTTCSEEEEEEC-SSCE-----------------EEEECCTTCSEEEEEETTSCEEEEETTTTE
T ss_pred EEEEECcCeEEEEECCCCcEEEEEcC-CCCE-----------------EEEEECCCCCEEEEEcCCCcEEEEECCCCc
Confidence 99999999999999999999988863 3444 78999999999997 46 99999998875
No 111
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.57 E-value=6.6e-14 Score=148.20 Aligned_cols=107 Identities=18% Similarity=0.186 Sum_probs=72.7
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCC--CCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPD--GQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpD--G~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.|..+++.++.+..|+-.. ...++++.+. |.+.|++++|+|+ |++| ++|+.|++|+|||+.+...
T Consensus 22 ~~latg~~dg~I~vwd~~~-----------~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l-~s~s~Dg~I~vwd~~~~~~ 89 (753)
T 3jro_A 22 KRLATCSSDKTIKIFEVEG-----------ETHKLIDTLTGHEGPVWRVDWAHPKFGTIL-ASCSYDGKVLIWKEENGRW 89 (753)
T ss_dssp CCEEEEETTTEEEEEEEET-----------TEEEEEEEECCCSSCEEEEEECCTTSCSEE-EEEETTSCEEEEEEETTEE
T ss_pred CeEEEEECCCcEEEEecCC-----------CCCccceeccCCcCceEEEEecCCCCCCEE-EEEeCCCeEEEEECCCCcc
Confidence 4778899999999998221 1234555564 7889999999998 8876 6778899999999987532
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCC--CCEEEEEeCCCeEEEEeCCCC
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPV--HQLICVGTIEGKVEAWDPRMK 133 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~--~~llasGs~DGtV~iWD~Rs~ 133 (358)
...... ..+...|++++|+|+ +.+|++|+.||+|++||++++
T Consensus 90 ~~~~~~-----------~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 90 SQIAVH-----------AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp EEEEEE-----------CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred cccccc-----------cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 111111 112245666666666 666666666666666666655
No 112
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.56 E-value=1.2e-13 Score=126.32 Aligned_cols=138 Identities=12% Similarity=0.126 Sum_probs=108.0
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+.++++.++.+..|+ .. +.++.+ .+...+.++.|+| ++.+| ++|+.++.|++||..+....
T Consensus 115 ~~l~~~~~d~~i~~~d--~~-------------~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~ 178 (313)
T 3odt_A 115 GVVISGSWDKTAKVWK--EG-------------SLVYNLQAHNASVWDAKVVSFSENKF-LTASADKTIKLWQNDKVIKT 178 (313)
T ss_dssp TEEEEEETTSEEEEEE--TT-------------EEEEEEECCSSCEEEEEEEETTTTEE-EEEETTSCEEEEETTEEEEE
T ss_pred CEEEEEeCCCCEEEEc--CC-------------cEEEecccCCCceeEEEEccCCCCEE-EEEECCCCEEEEecCceEEE
Confidence 4677888899999997 10 223333 3678899999999 88876 56788999999995432111
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCC
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASS 161 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~ 161 (358)
+...+...|++++|+|++. +++|+.||+|++||+++++++..+.+|...+
T Consensus 179 --------------~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i--------------- 228 (313)
T 3odt_A 179 --------------FSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFV--------------- 228 (313)
T ss_dssp --------------ECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCE---------------
T ss_pred --------------EeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceE---------------
Confidence 1111226799999999988 8999999999999999999999999888776
Q ss_pred CceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 162 DESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 162 ~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.++.|+|++. |++ .| .|+|||+.+++
T Consensus 229 --~~~~~~~~~~-l~~~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 229 --YCIKLLPNGD-IVSCGEDRTVRIWSKENGS 257 (313)
T ss_dssp --EEEEECTTSC-EEEEETTSEEEEECTTTCC
T ss_pred --EEEEEecCCC-EEEEecCCEEEEEECCCCc
Confidence 8899999995 554 46 99999999988
No 113
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.56 E-value=9e-14 Score=133.47 Aligned_cols=164 Identities=7% Similarity=-0.070 Sum_probs=100.6
Q ss_pred eecCCceeeeeeccCcccCCCccc--ccceeE-EEEe-eCCCCEeEEEEcCCCCEEEEEEecCCe-EEEEEcCCCceeee
Q psy2085 9 TNWHKQAVTLVIIGGRYLLPTNDI--RRRIEL-IQDF-EMPGVSTSVRISPDGQYVLSTGIYKPR-VRCYETDNLSMKFE 83 (358)
Q Consensus 9 ~~~~~~~~~~~~~~~r~lk~d~~~--~~rIel-iqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~-IrvwDl~~lslk~~ 83 (358)
++.++.+..|+-...+.......- ...+.. ++.+ .|.+.|++++|||||++| +||+.|++ |+|||+.+.....
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l-~s~s~d~~~v~iwd~~~~~~~~- 232 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMV-ATCSQDGTIIRVFKTEDGVLVR- 232 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEE-EEEETTCSEEEEEETTTCCEEE-
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEE-EEEeCCCCEEEEEECCCCcEEE-
Confidence 677888999983222211111100 011122 4444 478899999999999976 67889998 9999998653211
Q ss_pred eeccCceEEEEEeecC-CCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--eEEEeCC-----CCcccc--ccCCC
Q psy2085 84 RCFDSEVVTFEILSDD-YSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK--AGTLDCA-----FNCISN--ERDTE 153 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D-~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~--i~~L~~~-----~~~v~~--~~~i~ 153 (358)
.+... +...|++++|+|++.+|++|+.||+|++||++.+.. ...+... ...... .+.+.
T Consensus 233 -----------~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (355)
T 3vu4_A 233 -----------EFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLS 301 (355)
T ss_dssp -----------EEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECC
T ss_pred -----------EEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEec
Confidence 11111 336899999999999999999999999999987642 1222110 000000 00000
Q ss_pred ccccccCCCc-eeeEEcCCCCEEEE--ec-ceEEEECCCC
Q psy2085 154 EKEGKASSDE-SSEEEEEEEEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 154 gl~GtRs~~P-~sI~fs~d~~~llS--aD-~IKIWD~~tG 189 (358)
.....+ ..++|+++++.|++ .| .+++|++..+
T Consensus 302 ----~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 302 ----VDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp ----CCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred ----cCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence 000001 56899999998886 47 9999998754
No 114
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.55 E-value=9.8e-14 Score=136.65 Aligned_cols=119 Identities=9% Similarity=0.030 Sum_probs=94.4
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcC--CCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETD--NLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI 121 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~--~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~ 121 (358)
+...|++++|+|||++|+++|+.++.|+|||+. +.... +. +.. ..+...|++++|+|++.+|++|+.
T Consensus 101 ~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~--~~-------~~~--~~~~~~v~~~~~sp~~~~l~~~~~ 169 (450)
T 2vdu_B 101 IYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVL--KL-------RKR--FCFSKRPNAISIAEDDTTVIIADK 169 (450)
T ss_dssp CCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCE--EE-------EEE--EECSSCEEEEEECTTSSEEEEEET
T ss_pred cCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCcee--ee-------eec--ccCCCCceEEEEcCCCCEEEEEeC
Confidence 344799999999999988889999999999998 43211 10 000 011257999999999999999999
Q ss_pred CCeEEEEeCCCCceeE----EEeCCCCccccccCCCccccccCCCceeeEEcCC---CCEEEE--ec-ceEEEECCCCc
Q psy2085 122 EGKVEAWDPRMKVKAG----TLDCAFNCISNERDTEEKEGKASSDESSEEEEEE---EEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~----~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d---~~~llS--aD-~IKIWD~~tG~ 190 (358)
||.|.+||+.++.... .+.+|...+ .+|.|+|+ +.+|+| .| +|+|||+.+++
T Consensus 170 ~g~v~~~~~~~~~~~~~~~~~~~~h~~~v-----------------~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~ 231 (450)
T 2vdu_B 170 FGDVYSIDINSIPEEKFTQEPILGHVSML-----------------TDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF 231 (450)
T ss_dssp TSEEEEEETTSCCCSSCCCCCSEECSSCE-----------------EEEEEEECTTSCEEEEEEETTSCEEEEEESCTT
T ss_pred CCcEEEEecCCcccccccceeeecccCce-----------------EEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc
Confidence 9999999999887554 666666665 88999999 888887 46 99999999887
No 115
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.55 E-value=6.4e-14 Score=130.38 Aligned_cols=144 Identities=11% Similarity=0.148 Sum_probs=107.4
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCC-EEEEEEecCCeEEEEEc-CCCce
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQ-YVLSTGIYKPRVRCYET-DNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~-~LlatG~~d~~IrvwDl-~~lsl 80 (358)
.|.++++.++.+..|. .... ....+...+.+...|.+++|+|+|+ +| ++|+.++.|++||+ .+...
T Consensus 24 ~~l~~~~~d~~v~iw~~~~~~----------~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~ 92 (342)
T 1yfq_A 24 SLLLITSWDGSLTVYKFDIQA----------KNVDLLQSLRYKHPLLCCNFIDNTDLQI-YVGTVQGEILKVDLIGSPSF 92 (342)
T ss_dssp TEEEEEETTSEEEEEEEETTT----------TEEEEEEEEECSSCEEEEEEEESSSEEE-EEEETTSCEEEECSSSSSSE
T ss_pred CEEEEEcCCCeEEEEEeCCCC----------ccccceeeeecCCceEEEEECCCCCcEE-EEEcCCCeEEEEEeccCCce
Confidence 4778899999999999 3321 1122344457889999999999999 66 56778999999999 76432
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCC---------CceeEEEeCCCCccccccC
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRM---------KVKAGTLDCAFNCISNERD 151 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs---------~~~i~~L~~~~~~v~~~~~ 151 (358)
.... ...+...|++++|+| +.+|++|+.||+|++||+++ ++++.++. +...+
T Consensus 93 ~~~~------------~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v----- 153 (342)
T 1yfq_A 93 QALT------------NNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKI----- 153 (342)
T ss_dssp EECB------------SCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCE-----
T ss_pred Eecc------------ccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCce-----
Confidence 1110 000336899999999 99999999999999999998 66666555 33333
Q ss_pred CCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCC-Cc
Q psy2085 152 TEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEI-KK 190 (358)
Q Consensus 152 i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~t-G~ 190 (358)
.++.|+|++ .+++ .| .|+|||+.+ +.
T Consensus 154 ------------~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~ 182 (342)
T 1yfq_A 154 ------------FTMDTNSSR-LIVGMNNSQVQWFRLPLCED 182 (342)
T ss_dssp ------------EEEEECSSE-EEEEESTTEEEEEESSCCTT
T ss_pred ------------EEEEecCCc-EEEEeCCCeEEEEECCcccc
Confidence 789999988 3333 56 999999998 55
No 116
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.52 E-value=1e-13 Score=152.24 Aligned_cols=153 Identities=10% Similarity=0.043 Sum_probs=111.7
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee--
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK-- 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk-- 81 (358)
.|..+++.|+.+..|+-..+. ++....++..+.++.|+|++. + ++|+.+++|++||+.+....
T Consensus 1016 ~~l~s~~~dg~i~vwd~~~~~-------------~~~~~~~~~~v~~~~~~~~~~-l-~~~~~dg~v~vwd~~~~~~~~~ 1080 (1249)
T 3sfz_A 1016 KTLISSSEDSVIQVWNWQTGD-------------YVFLQAHQETVKDFRLLQDSR-L-LSWSFDGTVKVWNVITGRIERD 1080 (1249)
T ss_dssp SCEEEECSSSBEEEEETTTTE-------------EECCBCCSSCEEEEEECSSSE-E-EEEESSSEEEEEETTTTCCCEE
T ss_pred CEEEEEcCCCEEEEEECCCCc-------------eEEEecCCCcEEEEEEcCCCc-E-EEEECCCcEEEEECCCCceeEE
Confidence 367788899999999832221 122335778899999999886 3 46678999999999865432
Q ss_pred eeeeccCceEEEEEeecCC-----------------------------CCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy2085 82 FERCFDSEVVTFEILSDDY-----------------------------SSELNSIAINPVHQLICVGTIEGKVEAWDPRM 132 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~-----------------------------s~~In~i~~np~~~llasGs~DGtV~iWD~Rs 132 (358)
+..|. .. +....+++|. .+.|++++|+|++.+||+|+.||+|++||+.+
T Consensus 1081 ~~~~~-~~-v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~ 1158 (1249)
T 3sfz_A 1081 FTCHQ-GT-VLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSD 1158 (1249)
T ss_dssp EECCS-SC-CCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSS
T ss_pred EcccC-Cc-EEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 22221 11 1122223321 16799999999999999999999999999999
Q ss_pred CceeEEE---------eCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-ceEEEECCCCc
Q psy2085 133 KVKAGTL---------DCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-DDQAWTKEIKK 190 (358)
Q Consensus 133 ~~~i~~L---------~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-~IKIWD~~tG~ 190 (358)
++++..+ ..|...+ .+++|+|+|.+|++++ .|++||+.+|+
T Consensus 1159 ~~~~~~~~~~~~~~~~~~~~~~v-----------------~~l~fs~dg~~l~s~~g~v~vwd~~~g~ 1209 (1249)
T 3sfz_A 1159 GQLLHSCAPISVEEGTATHGGWV-----------------TDVCFSPDSKTLVSAGGYLKWWNVATGD 1209 (1249)
T ss_dssp SCCCCCCCCCC-------CCSCC-----------------CEEEECTTSSCEEEESSSEEEBCSSSCB
T ss_pred CceEEEeccccccccccccCceE-----------------EEEEECCCCCEEEECCCeEEEEECCCCc
Confidence 8877665 2333333 7899999999999999 99999999987
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.51 E-value=2.1e-12 Score=123.06 Aligned_cols=150 Identities=10% Similarity=0.019 Sum_probs=90.4
Q ss_pred eecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccC
Q psy2085 9 TNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDS 88 (358)
Q Consensus 9 ~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~ 88 (358)
.+.++.+..|+.... ++++.+.....+.+++|+|||++|+++++.++.|++||+.+......-....
T Consensus 92 ~~~~~~v~v~d~~~~-------------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 158 (391)
T 1l0q_A 92 NMASSTLSVIDTTSN-------------TVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR 158 (391)
T ss_dssp ETTTTEEEEEETTTT-------------EEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS
T ss_pred ECCCCEEEEEECCCC-------------eEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC
Confidence 334566777763222 3445556677899999999999998888889999999998654321111111
Q ss_pred ceEEEEEeecCCC-----------------------------CCeeEEEEcCCCCEEEEEe---CCCeEEEEeCCCCcee
Q psy2085 89 EVVTFEILSDDYS-----------------------------SELNSIAINPVHQLICVGT---IEGKVEAWDPRMKVKA 136 (358)
Q Consensus 89 e~v~f~~LS~D~s-----------------------------~~In~i~~np~~~llasGs---~DGtV~iWD~Rs~~~i 136 (358)
.+ ....+++|.. ..+.+++|+|++..|++++ .++.|.+||+++++.+
T Consensus 159 ~~-~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 159 SP-KGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp SE-EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred Cc-ceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEE
Confidence 11 1111111110 2344555555555444444 3455555555555554
Q ss_pred EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-E--ec-ceEEEECCCCc
Q psy2085 137 GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-S--SD-DDQAWTKEIKK 190 (358)
Q Consensus 137 ~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-S--aD-~IKIWD~~tG~ 190 (358)
..+..+.. |..+.|+|+++.|+ + .| .|++||..+|+
T Consensus 238 ~~~~~~~~------------------~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 238 ARIPVGPD------------------PAGIAVTPDGKKVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp EEEECCSS------------------EEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred EEEecCCC------------------ccEEEEccCCCEEEEEcCCCCEEEEEECCCCc
Confidence 44444332 27899999999884 5 36 99999999988
No 118
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.51 E-value=9.8e-14 Score=146.85 Aligned_cols=119 Identities=9% Similarity=0.050 Sum_probs=97.0
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC--CCEEEEEe
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV--HQLICVGT 120 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~--~~llasGs 120 (358)
.|.+.|++++|+|||++| ++|+.+++|+|||+.....+..... ..+.+.|++++|+|+ +++|++|+
T Consensus 7 gH~~~V~~l~~s~dg~~l-atg~~dg~I~vwd~~~~~~~~~~~l-----------~~h~~~V~~l~~s~~~~~~~l~s~s 74 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRL-ATCSSDKTIKIFEVEGETHKLIDTL-----------TGHEGPVWRVDWAHPKFGTILASCS 74 (753)
T ss_dssp -CCCCEEEECCCSSSCCE-EEEETTTEEEEEEEETTEEEEEEEE-----------CCCSSCEEEEEECCTTSCSEEEEEE
T ss_pred cCcceeEEEEECCCCCeE-EEEECCCcEEEEecCCCCCccceec-----------cCCcCceEEEEecCCCCCCEEEEEe
Confidence 378899999999999976 6778899999999875432222111 233478999999988 89999999
Q ss_pred CCCeEEEEeCCCCc--eeEEEeCCCCccccccCCCccccccCCCceeeEEcCC--CCEEEE--ec-ceEEEECCCCc
Q psy2085 121 IEGKVEAWDPRMKV--KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEE--EEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 121 ~DGtV~iWD~Rs~~--~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d--~~~llS--aD-~IKIWD~~tG~ 190 (358)
.||+|++||++++. .+..+.+|...+ .++.|+|+ +..|++ .| +|+|||+.++.
T Consensus 75 ~Dg~I~vwd~~~~~~~~~~~~~~h~~~V-----------------~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 75 YDGKVLIWKEENGRWSQIAVHAVHSASV-----------------NSVQWAPHEYGPLLLVASSDGKVSVVEFKENG 134 (753)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCE-----------------EEEEECCGGGCSEEEEEETTSEEEEEECCSSS
T ss_pred CCCeEEEEECCCCcccccccccCCCCCe-----------------EEEEECCCCCCCEEEEEeCCCcEEEEEeecCC
Confidence 99999999999987 677777777776 88999999 888886 46 99999998873
No 119
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.49 E-value=4.3e-13 Score=129.57 Aligned_cols=71 Identities=4% Similarity=-0.020 Sum_probs=59.4
Q ss_pred CCeeEEEEcCCCCEEEE--EeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e
Q psy2085 102 SELNSIAINPVHQLICV--GTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S 178 (358)
Q Consensus 102 ~~In~i~~np~~~llas--Gs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a 178 (358)
..+++|+|||+++++|+ |+.||+|++||+++++++..+.. ...| .+|+|+|+|++|++ +
T Consensus 134 ~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~-~~~V-----------------~~v~fspdg~~l~s~s 195 (365)
T 4h5i_A 134 DYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIET-RGEV-----------------KDLHFSTDGKVVAYIT 195 (365)
T ss_dssp CCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEEC-SSCC-----------------CEEEECTTSSEEEEEC
T ss_pred cCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCC-CCce-----------------EEEEEccCCceEEecc
Confidence 34889999999998764 45799999999999999998874 3444 88999999999997 5
Q ss_pred c-ceEEEECCCCc
Q psy2085 179 D-DDQAWTKEIKK 190 (358)
Q Consensus 179 D-~IKIWD~~tG~ 190 (358)
| .+.+|+..+|+
T Consensus 196 ~~~~~~~~~~~~~ 208 (365)
T 4h5i_A 196 GSSLEVISTVTGS 208 (365)
T ss_dssp SSCEEEEETTTCC
T ss_pred ceeEEEEEeccCc
Confidence 6 88888888776
No 120
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.49 E-value=2.1e-12 Score=126.33 Aligned_cols=150 Identities=14% Similarity=0.092 Sum_probs=95.0
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..+++.++.+..|+.... ++++.+ .|.+.|.+++| ||++| ++|+.+++|+|||+.+.....
T Consensus 144 ~~l~~g~~dg~i~iwd~~~~-------------~~~~~~~~h~~~v~~l~~--~~~~l-~sg~~dg~i~vwd~~~~~~~~ 207 (435)
T 1p22_A 144 QKIVSGLRDNTIKIWDKNTL-------------ECKRILTGHTGSVLCLQY--DERVI-ITGSSDSTVRVWDVNTGEMLN 207 (435)
T ss_dssp SEEEEEESSSCEEEEESSSC-------------CEEEEECCCSSCEEEEEC--CSSEE-EEEETTSCEEEEESSSCCEEE
T ss_pred CEEEEEeCCCeEEEEeCCCC-------------eEEEEEcCCCCcEEEEEE--CCCEE-EEEcCCCeEEEEECCCCcEEE
Confidence 46788899999999983222 233444 37788999998 77765 678899999999998654321
Q ss_pred ee-eccCceEEE-------EEeec----------------------CCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy2085 83 ER-CFDSEVVTF-------EILSD----------------------DYSSELNSIAINPVHQLICVGTIEGKVEAWDPRM 132 (358)
Q Consensus 83 ~r-~~d~e~v~f-------~~LS~----------------------D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs 132 (358)
.. .....+..+ ...+. .+...|++++| ++++|++|+.||+|++||+++
T Consensus 208 ~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~ 285 (435)
T 1p22_A 208 TLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTST 285 (435)
T ss_dssp EECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTT
T ss_pred EEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCc
Confidence 11 011111100 00011 11145566666 455666666666666666666
Q ss_pred CceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 133 KVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 133 ~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
++++.++.+|...+ .++.|+ +..|++ .| +|+|||..+|+
T Consensus 286 ~~~~~~~~~~~~~v-----------------~~~~~~--~~~l~~g~~dg~i~iwd~~~~~ 327 (435)
T 1p22_A 286 CEFVRTLNGHKRGI-----------------ACLQYR--DRLVVSGSSDNTIRLWDIECGA 327 (435)
T ss_dssp CCEEEEEECCSSCE-----------------EEEEEE--TTEEEEEETTSCEEEEETTTCC
T ss_pred CcEEEEEcCCCCcE-----------------EEEEeC--CCEEEEEeCCCeEEEEECCCCC
Confidence 66666666655544 677884 567776 46 99999999988
No 121
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.47 E-value=2.1e-12 Score=126.31 Aligned_cols=127 Identities=9% Similarity=0.019 Sum_probs=87.0
Q ss_pred CEeEEEEcCC----CCEEEEEEecCCeEEEEEcCCCceeeee-eccCceEEEEEeecCCC---------CCeeEEEEcC-
Q psy2085 47 VSTSVRISPD----GQYVLSTGIYKPRVRCYETDNLSMKFER-CFDSEVVTFEILSDDYS---------SELNSIAINP- 111 (358)
Q Consensus 47 ~v~~v~~SpD----G~~LlatG~~d~~IrvwDl~~lslk~~r-~~d~e~v~f~~LS~D~s---------~~In~i~~np- 111 (358)
.|+.++|||| |++++++| . .++||++.+..+.... ......|....+++|.. ..++.++|+|
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g-~--~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~ 189 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSG-N--IKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEV 189 (356)
T ss_dssp EEEEECC------CCEEEEEEE-E--EEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEE
T ss_pred ceEEEEECCCccccccEEEeCC-C--eEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeecc
Confidence 5789999999 99887654 2 3777887654332221 00122344444555432 5788999999
Q ss_pred --CCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE------------E
Q psy2085 112 --VHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE------------S 177 (358)
Q Consensus 112 --~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll------------S 177 (358)
++.+||+||.|++|++||+++++++.+|.+|...+. .+ ..++|+|+|.+++ |
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~---~v-----------~~vafSpdG~~lvs~s~~~~~w~laS 255 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQA---SV-----------CHKAYSEMGLLFIVLSHPCAKESESL 255 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---C---CC-----------EEEEEEETTEEEEEEC----------
T ss_pred CCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCccee---ee-----------EEEEECCCCCEEEEeccCCCcceeec
Confidence 678999999999999999999999999986543221 11 5678999988763 3
Q ss_pred --ec-ceEEEECCCCc
Q psy2085 178 --SD-DDQAWTKEIKK 190 (358)
Q Consensus 178 --aD-~IKIWD~~tG~ 190 (358)
.| +||+||..+|+
T Consensus 256 Gs~D~tIklWd~~tgk 271 (356)
T 2w18_A 256 RSPVFQLIVINPKTTL 271 (356)
T ss_dssp --CCEEEEEEETTTTE
T ss_pred cCCCcEEEEEECCCCE
Confidence 47 99999999998
No 122
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.44 E-value=6.1e-12 Score=123.01 Aligned_cols=154 Identities=10% Similarity=0.106 Sum_probs=98.5
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|.++++.|+++..|+.... ++++.+ .|.+.|.++.|+ +.+ +++|+.+++|++||+.+.....
T Consensus 130 ~~l~sg~~dg~i~vwd~~~~-------------~~~~~~~~h~~~v~~~~~~--~~~-l~s~~~dg~i~vwd~~~~~~~~ 193 (445)
T 2ovr_B 130 NRIVSGSDDNTLKVWSAVTG-------------KCLRTLVGHTGGVWSSQMR--DNI-IISGSTDRTLKVWNAETGECIH 193 (445)
T ss_dssp TEEEEEETTSCEEEEETTTC-------------CEEEECCCCSSCEEEEEEE--TTE-EEEEETTSCEEEEETTTTEEEE
T ss_pred CEEEEEECCCcEEEEECCCC-------------cEEEEEcCCCCCEEEEEec--CCE-EEEEeCCCeEEEEECCcCcEEE
Confidence 47788999999999993222 133344 377889999998 444 4778899999999998753221
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccc-cCCCccc-----
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNE-RDTEEKE----- 156 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~-~~i~gl~----- 156 (358)
. . ..+...|++++++ ++.|++|+.||+|++||+++++++..+.+|...+.+. +.-.-+.
T Consensus 194 ~--~-----------~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d 258 (445)
T 2ovr_B 194 T--L-----------YGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYD 258 (445)
T ss_dssp E--E-----------CCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETT
T ss_pred E--E-----------CCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCC
Confidence 1 1 1122567777775 3567777777777777777777777777666655321 1100000
Q ss_pred cc------c----------CCCc-eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 157 GK------A----------SSDE-SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 157 Gt------R----------s~~P-~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|+ + +..+ .++.| ++..|++ .| +|+|||+.+++
T Consensus 259 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~ 310 (445)
T 2ovr_B 259 FMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN 310 (445)
T ss_dssp SCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCC
T ss_pred CEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCC
Confidence 11 0 1111 67777 6677775 46 89999988887
No 123
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.44 E-value=1.3e-12 Score=130.08 Aligned_cols=154 Identities=10% Similarity=0.046 Sum_probs=103.4
Q ss_pred EeecCCceeeee-eccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeee
Q psy2085 8 QTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERC 85 (358)
Q Consensus 8 ~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~ 85 (358)
+++.|+++..|+ ..... ......+.+..++.+. |...|++|+|+|++..++++|+.|++|+|||+.+......
T Consensus 113 sgs~d~~v~iwd~~~~~~---~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~-- 187 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSN---EAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCA-- 187 (434)
T ss_dssp ETTTEEEEEEEEHHHHHC---TTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEE--
T ss_pred ccCCCceEEEEEcccccc---CCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceee--
Confidence 788899999999 32210 0000111222333333 6788999999998434557888999999999986421110
Q ss_pred ccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccc-cccCCCccccccCCCce
Q psy2085 86 FDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCIS-NERDTEEKEGKASSDES 164 (358)
Q Consensus 86 ~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~-~~~~i~gl~GtRs~~P~ 164 (358)
.. .+...|++++|+|++.+|++|+.||+|++||++ +....++..+..... ....+ .
T Consensus 188 ---------~~--~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v-----------~ 244 (434)
T 2oit_A 188 ---------TL--PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRV-----------L 244 (434)
T ss_dssp ---------EE--CGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEE-----------E
T ss_pred ---------cc--CCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeE-----------E
Confidence 01 122579999999999999999999999999998 666667765432100 00011 7
Q ss_pred eeEEcCCCCEEEEe---c-------ceEEEECCCC
Q psy2085 165 SEEEEEEEEEEESS---D-------DDQAWTKEIK 189 (358)
Q Consensus 165 sI~fs~d~~~llSa---D-------~IKIWD~~tG 189 (358)
+|.|++++.++++. | .+++||+.+.
T Consensus 245 ~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 245 DVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 89999998887642 2 2999999864
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.43 E-value=7e-12 Score=121.06 Aligned_cols=119 Identities=13% Similarity=0.176 Sum_probs=93.8
Q ss_pred EEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEE
Q psy2085 38 LIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLIC 117 (358)
Q Consensus 38 liqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~lla 117 (358)
+++.+.++..+.+++|+|||++|+++++.+++|++||+.+.... .. +.. ...+++++|+|++.+|+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~--~~----------~~~--~~~~~~~~~s~dg~~l~ 360 (433)
T 3bws_A 295 LIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQ--KS----------IPV--FDKPNTIALSPDGKYLY 360 (433)
T ss_dssp EEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEE--EE----------EEC--SSSEEEEEECTTSSEEE
T ss_pred EEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEE--EE----------ecC--CCCCCeEEEcCCCCEEE
Confidence 34445566678999999999999999889999999999864321 11 111 15789999999999888
Q ss_pred EEeC---------------CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--e-c
Q psy2085 118 VGTI---------------EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--S-D 179 (358)
Q Consensus 118 sGs~---------------DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--a-D 179 (358)
+++. ||.|.+||+.+++.+..+..+..+ ..++|+|+|+.|++ . |
T Consensus 361 ~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~------------------~~~~~s~dg~~l~~~~~~d 422 (433)
T 3bws_A 361 VSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQP------------------TGLDVSPDNRYLVISDFLD 422 (433)
T ss_dssp EEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSE------------------EEEEECTTSCEEEEEETTT
T ss_pred EEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCC------------------ceEEEcCCCCEEEEEECCC
Confidence 7776 589999999999999888864432 78999999999874 3 6
Q ss_pred -ceEEEECCC
Q psy2085 180 -DDQAWTKEI 188 (358)
Q Consensus 180 -~IKIWD~~t 188 (358)
+|+|||++.
T Consensus 423 ~~i~v~~~~~ 432 (433)
T 3bws_A 423 HQIRVYRRDG 432 (433)
T ss_dssp TEEEEEEETT
T ss_pred CeEEEEEecC
Confidence 999999863
No 125
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.41 E-value=1.2e-11 Score=114.21 Aligned_cols=148 Identities=8% Similarity=0.008 Sum_probs=110.9
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCC---CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPG---VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~---~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.|.++.+.+.++..|+.... ++++.+..+. .+.+++|||||+++++++..+++|.+||+.+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~-------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~ 68 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM-------------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET 68 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT-------------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE
T ss_pred cEEEEcCCCCeEEEEECCCC-------------cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCe
Confidence 47888999999999983222 2345555565 5889999999999888888889999999986543
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe------------CCCeEEEEeCCCCceeEEEeCCCCcccc
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT------------IEGKVEAWDPRMKVKAGTLDCAFNCISN 148 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs------------~DGtV~iWD~Rs~~~i~~L~~~~~~v~~ 148 (358)
...-....... +...+.+++|+|+++.|++++ .++.|.+||+.+++.+..+.....+
T Consensus 69 ~~~~~~~~~~~--------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~--- 137 (337)
T 1pby_B 69 LGRIDLSTPEE--------RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQI--- 137 (337)
T ss_dssp EEEEECCBTTE--------EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSC---
T ss_pred EeeEEcCCccc--------ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCc---
Confidence 21100000000 002567899999999888876 5799999999999888887754332
Q ss_pred ccCCCccccccCCCceeeEEcCCCCEEEEec-ceEEEECCCCc
Q psy2085 149 ERDTEEKEGKASSDESSEEEEEEEEEEESSD-DDQAWTKEIKK 190 (358)
Q Consensus 149 ~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-~IKIWD~~tG~ 190 (358)
..+.|+|+|++|+.++ .|.+||..+|+
T Consensus 138 ---------------~~~~~s~dg~~l~~~~~~i~~~d~~~~~ 165 (337)
T 1pby_B 138 ---------------TMLAWARDGSKLYGLGRDLHVMDPEAGT 165 (337)
T ss_dssp ---------------CCEEECTTSSCEEEESSSEEEEETTTTE
T ss_pred ---------------ceeEECCCCCEEEEeCCeEEEEECCCCc
Confidence 6799999999888889 99999999987
No 126
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.40 E-value=7.4e-12 Score=122.43 Aligned_cols=111 Identities=11% Similarity=0.195 Sum_probs=88.2
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE 122 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D 122 (358)
.|...|++++| +|++| ++|+.++.|+|||+.+...... . ..+...|.+++++ +.+|++|+.|
T Consensus 254 ~~~~~v~~~~~--~~~~l-~s~~~dg~i~vwd~~~~~~~~~--~-----------~~~~~~v~~~~~~--~~~l~~g~~d 315 (435)
T 1p22_A 254 GHRAAVNVVDF--DDKYI-VSASGDRTIKVWNTSTCEFVRT--L-----------NGHKRGIACLQYR--DRLVVSGSSD 315 (435)
T ss_dssp CCSSCEEEEEE--ETTEE-EEEETTSEEEEEETTTCCEEEE--E-----------ECCSSCEEEEEEE--TTEEEEEETT
T ss_pred CCCCcEEEEEe--CCCEE-EEEeCCCeEEEEECCcCcEEEE--E-----------cCCCCcEEEEEeC--CCEEEEEeCC
Confidence 46778999999 78876 5678899999999987543211 1 1223678899885 5799999999
Q ss_pred CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 123 GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 123 GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|+|++||+++++++.++.+|...+ .++.| ++..|++ .| .|+|||+.++.
T Consensus 316 g~i~iwd~~~~~~~~~~~~h~~~v-----------------~~~~~--~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 316 NTIRLWDIECGACLRVLEGHEELV-----------------RCIRF--DNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCE-----------------EEEEC--CSSEEEEEETTSCEEEEEHHHHT
T ss_pred CeEEEEECCCCCEEEEEeCCcCcE-----------------EEEEe--cCCEEEEEeCCCcEEEEECCCCC
Confidence 999999999999999999888776 77888 6778886 46 99999997654
No 127
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.39 E-value=4.5e-12 Score=123.57 Aligned_cols=110 Identities=14% Similarity=0.131 Sum_probs=85.5
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEA 127 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~i 127 (358)
++.|+||+++ ++|+|. |++|+|||+.+..... ...+ ..+...|++|+|+|++.+||+|+.||+|++
T Consensus 108 ~~~l~wS~~n--~lAvgl-d~tV~lWd~~tg~~~~----------~~~~-~~~~~~V~sv~fspdg~~lasgs~Dg~v~i 173 (420)
T 4gga_A 108 LNLVDWSSGN--VLAVAL-DNSVYLWSASSGDILQ----------LLQM-EQPGEYISSVAWIKEGNYLAVGTSSAEVQL 173 (420)
T ss_dssp CBCEEECTTS--EEEEEE-TTEEEEEETTTCCEEE----------EEEC-CSTTCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ceeEEECCCC--EEEEEe-CCEEEEEECCCCCEEE----------EEEe-cCCCCcEEEEEECCCCCEEEEEECCCeEEE
Confidence 6889999875 557775 8899999998754321 1111 122357999999999999999999999999
Q ss_pred EeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 128 WDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 128 WD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
||+++++++.++.+|...+ .++.|+ +..|++ .| .+++||.....
T Consensus 174 Wd~~~~~~~~~~~~h~~~v-----------------~~~s~~--~~~l~sgs~d~~i~~~d~~~~~ 220 (420)
T 4gga_A 174 WDVQQQKRLRNMTSHSARV-----------------GSLSWN--SYILSSGSRSGHIHHHDVRVAE 220 (420)
T ss_dssp EETTTTEEEEEECCCSSCE-----------------EEEEEE--TTEEEEEETTSEEEEEETTSSS
T ss_pred EEcCCCcEEEEEeCCCCce-----------------EEEeeC--CCEEEEEeCCCceeEeeecccc
Confidence 9999999999999887765 556654 567776 46 99999987644
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.37 E-value=2e-11 Score=117.85 Aligned_cols=141 Identities=8% Similarity=-0.052 Sum_probs=104.4
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
+.++.+.++.+..|+.... +++..+ .+...+.+++|+|||++++++++.++.|++||+.+....
T Consensus 183 ~~~s~~~d~~v~~~d~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~-- 247 (433)
T 3bws_A 183 LWVSQMQANAVHVFDLKTL-------------AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEI-- 247 (433)
T ss_dssp EEEEEGGGTEEEEEETTTC-------------CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEE--
T ss_pred EEEEECCCCEEEEEECCCc-------------eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEE--
Confidence 4556677777888873211 123333 356689999999999999888878999999999865321
Q ss_pred eeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe--------CCCeEEEEeCCCCceeEEEeCCCCccccccCCCcc
Q psy2085 84 RCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT--------IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEK 155 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs--------~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl 155 (358)
.... . ...+.+++|+|+++.|++++ .||.|.+||+++++.+..+.... .+
T Consensus 248 ~~~~----------~--~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~-~~--------- 305 (433)
T 3bws_A 248 RKTD----------K--IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG-NK--------- 305 (433)
T ss_dssp EECC----------C--CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE-CE---------
T ss_pred EEec----------C--CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC-Cc---------
Confidence 1111 1 14589999999999888888 58999999999998877764322 22
Q ss_pred ccccCCCceeeEEcCCCCEEE-E--ec-ceEEEECCCCc
Q psy2085 156 EGKASSDESSEEEEEEEEEEE-S--SD-DDQAWTKEIKK 190 (358)
Q Consensus 156 ~GtRs~~P~sI~fs~d~~~ll-S--aD-~IKIWD~~tG~ 190 (358)
..+.|+|+++.|+ + .| .|++||..+++
T Consensus 306 --------~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~ 336 (433)
T 3bws_A 306 --------RHIVSGNTENKIYVSDMCCSKIEVYDLKEKK 336 (433)
T ss_dssp --------EEEEECSSTTEEEEEETTTTEEEEEETTTTE
T ss_pred --------ceEEECCCCCEEEEEecCCCEEEEEECCCCc
Confidence 7799999998665 4 35 99999999887
No 129
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.36 E-value=5.5e-11 Score=116.20 Aligned_cols=129 Identities=12% Similarity=0.128 Sum_probs=87.6
Q ss_pred EEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeee-eccCceEEE-------EEeecC---------
Q psy2085 38 LIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFER-CFDSEVVTF-------EILSDD--------- 99 (358)
Q Consensus 38 liqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r-~~d~e~v~f-------~~LS~D--------- 99 (358)
+++.+. +...+.++.| ||.+| ++|+.++.|++||+.+....... .....+..+ ...+.|
T Consensus 271 ~~~~~~~~~~~v~~~~~--~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~ 347 (445)
T 2ovr_B 271 CLHTLQGHTNRVYSLQF--DGIHV-VSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIK 347 (445)
T ss_dssp EEEEECCCSSCEEEEEE--CSSEE-EEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred EeEEecCCCCceEEEEE--CCCEE-EEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECC
Confidence 445554 6778999998 78876 56778999999999865432111 011111111 111111
Q ss_pred -------------CCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEe-----CCCCccccccCCCccccccCC
Q psy2085 100 -------------YSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLD-----CAFNCISNERDTEEKEGKASS 161 (358)
Q Consensus 100 -------------~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~-----~~~~~v~~~~~i~gl~GtRs~ 161 (358)
+...|++++|+ +++|++|+.||+|++||+++++.+..+. .+...+
T Consensus 348 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v--------------- 410 (445)
T 2ovr_B 348 TGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVV--------------- 410 (445)
T ss_dssp TCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEE---------------
T ss_pred CCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceE---------------
Confidence 22568888886 4789999999999999999998888873 233333
Q ss_pred CceeeEEcCCCCEEEE--ec-c----eEEEECCC
Q psy2085 162 DESSEEEEEEEEEEES--SD-D----DQAWTKEI 188 (358)
Q Consensus 162 ~P~sI~fs~d~~~llS--aD-~----IKIWD~~t 188 (358)
.+++|+|++..|++ .| + |.|||...
T Consensus 411 --~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 411 --WRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp --EEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred --EEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 78999999998886 34 6 99999864
No 130
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.36 E-value=2.4e-11 Score=112.41 Aligned_cols=146 Identities=17% Similarity=0.154 Sum_probs=102.8
Q ss_pred eEEEEe-ecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcC--CCc
Q psy2085 4 EYCYQT-NWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETD--NLS 79 (358)
Q Consensus 4 ~~~~~~-~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~--~ls 79 (358)
.|.|.. +.++.+..|+ ...+ ..+.++.+.+...+.+++|||||++|++++..++.|.+|++. +..
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~ 73 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEG-----------ALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA 73 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTS-----------CEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred EEEEEeCCCCCeEEEEEECCCC-----------cEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc
Confidence 466666 6688999998 3211 234566677888899999999999987766555899999997 333
Q ss_pred eeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe-CCCeEEEEeCC---CCceeEEEeCCCCccccccCCCcc
Q psy2085 80 MKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT-IEGKVEAWDPR---MKVKAGTLDCAFNCISNERDTEEK 155 (358)
Q Consensus 80 lk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs-~DGtV~iWD~R---s~~~i~~L~~~~~~v~~~~~i~gl 155 (358)
++.... +... ..+.+++|+|+++.|++++ .+|.|.+||+. +...+..+..+..+
T Consensus 74 ~~~~~~----------~~~~--~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~---------- 131 (343)
T 1ri6_A 74 LTFAAE----------SALP--GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGC---------- 131 (343)
T ss_dssp EEEEEE----------EECS--SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTB----------
T ss_pred eeeccc----------cccC--CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCc----------
Confidence 221111 1111 3688999999999665554 58999999994 44445555443322
Q ss_pred ccccCCCceeeEEcCCCCEEEE---ec-ceEEEECCC-Cc
Q psy2085 156 EGKASSDESSEEEEEEEEEEES---SD-DDQAWTKEI-KK 190 (358)
Q Consensus 156 ~GtRs~~P~sI~fs~d~~~llS---aD-~IKIWD~~t-G~ 190 (358)
..+.|+|+|+.|++ .| .|.+||+.+ |+
T Consensus 132 --------~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 163 (343)
T 1ri6_A 132 --------HSANISPDNRTLWVPALKQDRICLFTVSDDGH 163 (343)
T ss_dssp --------CCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred --------eEEEECCCCCEEEEecCCCCEEEEEEecCCCc
Confidence 67999999998775 35 999999987 64
No 131
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.32 E-value=2.6e-10 Score=105.35 Aligned_cols=162 Identities=12% Similarity=0.185 Sum_probs=87.5
Q ss_pred eeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCC-CceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC
Q psy2085 36 IELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDN-LSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ 114 (358)
Q Consensus 36 Ieliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~-lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ 114 (358)
.++++.+.....+.+++|+|||++|++++..+++|.+||+.. ..+..... . .+.......+++++|+|+++
T Consensus 119 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~pdg~ 190 (343)
T 1ri6_A 119 VGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDP-------A-EVTTVEGAGPRHMVFHPNEQ 190 (343)
T ss_dssp EEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEE-------E-EEECSTTCCEEEEEECTTSS
T ss_pred ccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecc-------c-ccccCCCCCcceEEECCCCC
Confidence 345566666667999999999999987775789999999976 33321100 0 00000002455566666655
Q ss_pred EE-EEEeCCCeEEEEeCCC--Cce--eEE----------------EeC-CCC-ccc-cc--------cCCCccccc----
Q psy2085 115 LI-CVGTIEGKVEAWDPRM--KVK--AGT----------------LDC-AFN-CIS-NE--------RDTEEKEGK---- 158 (358)
Q Consensus 115 ll-asGs~DGtV~iWD~Rs--~~~--i~~----------------L~~-~~~-~v~-~~--------~~i~gl~Gt---- 158 (358)
.+ +++..++.|.+||+.. +.. +.. +.. +.. .+. .. +.++...|+
T Consensus 191 ~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~ 270 (343)
T 1ri6_A 191 YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKE 270 (343)
T ss_dssp EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEE
T ss_pred EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEe
Confidence 33 3333556666666532 111 000 100 000 000 00 000000011
Q ss_pred ----cCCCceeeEEcCCCCEEEE-e--c-ceEEE--ECCCCc-----EEecCCCCCcccccc
Q psy2085 159 ----ASSDESSEEEEEEEEEEES-S--D-DDQAW--TKEIKK-----TYNLGPAPKWCGFLD 205 (358)
Q Consensus 159 ----Rs~~P~sI~fs~d~~~llS-a--D-~IKIW--D~~tG~-----~y~lgpap~Wcsfld 205 (358)
....|..++|+|+|++|+. . | .|.|| |..+|+ .+..|..|.++.|..
T Consensus 271 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~ 332 (343)
T 1ri6_A 271 GFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNA 332 (343)
T ss_dssp EEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEE
T ss_pred eeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCCeeEEEEc
Confidence 0111378999999998775 2 4 99999 555775 236788888877753
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.30 E-value=3.3e-10 Score=105.28 Aligned_cols=126 Identities=13% Similarity=0.149 Sum_probs=93.6
Q ss_pred EEEEeeCCCCEeEEEEcCCCCEEEEEEecCCe-EEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-E
Q psy2085 38 LIQDFEMPGVSTSVRISPDGQYVLSTGIYKPR-VRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-L 115 (358)
Q Consensus 38 liqdfe~~~~v~~v~~SpDG~~LlatG~~d~~-IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-l 115 (358)
+++.+.......+++|+|||++|++++..++. |.+|++......... ....+... ....+++|+|+++ +
T Consensus 120 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~-------~~~~~~~~--~~~~~~~~spdg~~l 190 (331)
T 3u4y_A 120 FISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDT-------GQEFISGG--TRPFNITFTPDGNFA 190 (331)
T ss_dssp EEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEE-------EEEEECSS--SSEEEEEECTTSSEE
T ss_pred eEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeec-------CCccccCC--CCccceEECCCCCEE
Confidence 34556666778999999999998888877788 999999753211110 01112221 4689999999998 5
Q ss_pred EEEEeCCCeEEEEeCCCCce---eEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE---ec-ceEEEECCC
Q psy2085 116 ICVGTIEGKVEAWDPRMKVK---AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES---SD-DDQAWTKEI 188 (358)
Q Consensus 116 lasGs~DGtV~iWD~Rs~~~---i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS---aD-~IKIWD~~t 188 (358)
++++..+++|.+||+.+++. +..+..+..+ ..+.|+|+|++|+. .+ .|.+||..+
T Consensus 191 ~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~------------------~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 191 FVANLIGNSIGILETQNPENITLLNAVGTNNLP------------------GTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp EEEETTTTEEEEEECSSTTSCEEEEEEECSSCC------------------CCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred EEEeCCCCeEEEEECCCCcccceeeeccCCCCC------------------ceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 56666799999999999988 7777754333 67999999997764 24 999999999
Q ss_pred Cc
Q psy2085 189 KK 190 (358)
Q Consensus 189 G~ 190 (358)
|+
T Consensus 253 ~~ 254 (331)
T 3u4y_A 253 GT 254 (331)
T ss_dssp TE
T ss_pred Cc
Confidence 88
No 133
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.26 E-value=2.7e-10 Score=112.00 Aligned_cols=114 Identities=11% Similarity=0.003 Sum_probs=84.1
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecC---CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEE-EE
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYK---PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLIC-VG 119 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d---~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~lla-sG 119 (358)
+...+.+++|||||++|+.+ +++ ++|++||+.+..... +. .+...+.+++|+|+++.|+ ++
T Consensus 177 ~~~~v~~~~~Spdg~~la~~-s~~~~~~~i~~~d~~tg~~~~------------l~--~~~~~~~~~~~spdg~~la~~~ 241 (415)
T 2hqs_A 177 SPQPLMSPAWSPDGSKLAYV-TFESGRSALVIQTLANGAVRQ------------VA--SFPRHNGAPAFSPDGSKLAFAL 241 (415)
T ss_dssp ESSCEEEEEECTTSSEEEEE-ECTTSSCEEEEEETTTCCEEE------------EE--CCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCcceeeEEcCCCCEEEEE-EecCCCcEEEEEECCCCcEEE------------ee--cCCCcccCEEEcCCCCEEEEEE
Confidence 56789999999999988654 455 499999998653211 00 1125689999999999777 66
Q ss_pred eCCCe--EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e--c---ceEEEECCCCc
Q psy2085 120 TIEGK--VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S--D---DDQAWTKEIKK 190 (358)
Q Consensus 120 s~DGt--V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a--D---~IKIWD~~tG~ 190 (358)
+.||. |.+||+++++. ..+..+...+ ..+.|+|+|+.|++ + | .|.+||..+|+
T Consensus 242 ~~~g~~~i~~~d~~~~~~-~~l~~~~~~~-----------------~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 242 SKTGSLNLYVMDLASGQI-RQVTDGRSNN-----------------TEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA 302 (415)
T ss_dssp CTTSSCEEEEEETTTCCE-EECCCCSSCE-----------------EEEEECTTSSEEEEEECTTSSCEEEEEETTSSC
T ss_pred ecCCCceEEEEECCCCCE-EeCcCCCCcc-----------------cceEECCCCCEEEEEECCCCCcEEEEEECCCCC
Confidence 66665 99999998875 4555554444 77999999998874 3 3 57777998876
No 134
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.24 E-value=2.3e-10 Score=106.27 Aligned_cols=146 Identities=12% Similarity=0.114 Sum_probs=102.6
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCC--CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPG--VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~--~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
+..+.+.+.++..|+.... ++++.+..+. .+..++|+|||+++++++..+++|.+||+.+.....
T Consensus 13 ~~v~~~~~~~v~~~d~~~~-------------~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 13 YMIVTNYPNNLHVVDVASD-------------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp EEEEEETTTEEEEEETTTT-------------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEeCCCCeEEEEECCCC-------------cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence 4556677888888884332 2344455555 678999999999888888788999999998653321
Q ss_pred eeeccCc-eEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC------------CeEEEEeCCCCce---eEEEeCCCCcc
Q psy2085 83 ERCFDSE-VVTFEILSDDYSSELNSIAINPVHQLICVGTIE------------GKVEAWDPRMKVK---AGTLDCAFNCI 146 (358)
Q Consensus 83 ~r~~d~e-~v~f~~LS~D~s~~In~i~~np~~~llasGs~D------------GtV~iWD~Rs~~~---i~~L~~~~~~v 146 (358)
.-..... ... ...+++++|+|+++.|++++.+ +.|.+||+.+++. +..+..+.. +
T Consensus 80 ~~~~~~~~~~~--------~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~ 150 (349)
T 1jmx_B 80 HANLSSVPGEV--------GRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQ-V 150 (349)
T ss_dssp EEESCCSTTEE--------EECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSS-C
T ss_pred EEEcccccccc--------cccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCc-c
Confidence 1110000 000 0237899999999999888865 9999999988543 344444332 2
Q ss_pred ccccCCCccccccCCCceeeEEcCCCCEEEEec-ceEEEECCCCc
Q psy2085 147 SNERDTEEKEGKASSDESSEEEEEEEEEEESSD-DDQAWTKEIKK 190 (358)
Q Consensus 147 ~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-~IKIWD~~tG~ 190 (358)
..++|+|+|+ |+.++ .|.+||..+|+
T Consensus 151 -----------------~~~~~s~dg~-l~~~~~~i~~~d~~~~~ 177 (349)
T 1jmx_B 151 -----------------YLMRAADDGS-LYVAGPDIYKMDVKTGK 177 (349)
T ss_dssp -----------------CCEEECTTSC-EEEESSSEEEECTTTCC
T ss_pred -----------------cceeECCCCc-EEEccCcEEEEeCCCCc
Confidence 6789999999 66677 99999999988
No 135
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.21 E-value=8.1e-10 Score=108.58 Aligned_cols=117 Identities=10% Similarity=-0.015 Sum_probs=85.6
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCC--eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKP--RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT 120 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~--~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs 120 (358)
.+++.+.+++|||||++|+.+++.++ .|.+||+.+.... +-. .+...+.+++|+|+++.|++++
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~--~l~------------~~~~~~~~~~~spdg~~l~~~s 285 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR--QVT------------DGRSNNTEPTWFPDSQNLAFTS 285 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE--ECC------------CCSSCEEEEEECTTSSEEEEEE
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE--eCc------------CCCCcccceEECCCCCEEEEEE
Confidence 46778999999999999886765544 5999999864321 110 1115689999999999888888
Q ss_pred C-CC--eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--e---c-ceEEEECCCCcE
Q psy2085 121 I-EG--KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--S---D-DDQAWTKEIKKT 191 (358)
Q Consensus 121 ~-DG--tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--a---D-~IKIWD~~tG~~ 191 (358)
. +| .|.+||+.+++. ..+..+...+ .++.|+|+|++|++ . + .|.+||+.+|+.
T Consensus 286 ~~~g~~~i~~~d~~~~~~-~~l~~~~~~~-----------------~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 286 DQAGRPQVYKVNINGGAP-QRITWEGSQN-----------------QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp CTTSSCEEEEEETTSSCC-EECCCSSSEE-----------------EEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred CCCCCcEEEEEECCCCCE-EEEecCCCcc-----------------cCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 6 45 677779988763 3343333333 67999999999885 2 3 899999998873
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.17 E-value=1e-09 Score=112.34 Aligned_cols=152 Identities=11% Similarity=0.090 Sum_probs=107.2
Q ss_pred eEEEEeecCCceeeeee--ccCcccCCCcccccceeEEEEeeCCCCEeEEEEcC----CCCEEEEEEecCCeEEEEEcCC
Q psy2085 4 EYCYQTNWHKQAVTLVI--IGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISP----DGQYVLSTGIYKPRVRCYETDN 77 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~--~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~Sp----DG~~LlatG~~d~~IrvwDl~~ 77 (358)
.|.|.++.+.++..|+. .. .++++.+........++||| ||++|++++..+++|.|||..+
T Consensus 191 ~~l~v~~~d~~V~v~D~~~~t-------------~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t 257 (543)
T 1nir_A 191 RYLLVIGRDARIDMIDLWAKE-------------PTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET 257 (543)
T ss_dssp CEEEEEETTSEEEEEETTSSS-------------CEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT
T ss_pred CEEEEECCCCeEEEEECcCCC-------------CcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc
Confidence 58899999988999984 22 13455666666789999999 9999987766789999999987
Q ss_pred CceeeeeeccCce--EEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeE--EEeCCCCccccccCC
Q psy2085 78 LSMKFERCFDSEV--VTFEILSDDYSSELNSIAINPVHQ-LICVGTIEGKVEAWDPRMKVKAG--TLDCAFNCISNERDT 152 (358)
Q Consensus 78 lslk~~r~~d~e~--v~f~~LS~D~s~~In~i~~np~~~-llasGs~DGtV~iWD~Rs~~~i~--~L~~~~~~v~~~~~i 152 (358)
+... ....... ++.....++ ..+.+|.++|++. +++++..+|+|.+||..+.+.+. ++.....+
T Consensus 258 ~~~~--~~i~~~g~~~~~~~~~~~--~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~------- 326 (543)
T 1nir_A 258 LEPK--QIVSTRGMTVDTQTYHPE--PRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFL------- 326 (543)
T ss_dssp CCEE--EEEECCEECSSSCCEESC--CCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSC-------
T ss_pred cccc--eeecccCcccCccccccC--CceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCc-------
Confidence 5432 1110000 000000111 3688999999765 67788889999999998876544 44432222
Q ss_pred CccccccCCCceeeEEcCCCCEEEE---ec-ceEEEECCCCc
Q psy2085 153 EEKEGKASSDESSEEEEEEEEEEES---SD-DDQAWTKEIKK 190 (358)
Q Consensus 153 ~gl~GtRs~~P~sI~fs~d~~~llS---aD-~IKIWD~~tG~ 190 (358)
..+.|+|+|+++++ .| +|.+||..+|+
T Consensus 327 -----------~~~~~spdg~~l~va~~~~~~v~v~D~~tg~ 357 (543)
T 1nir_A 327 -----------HDGGWDSSHRYFMTAANNSNKVAVIDSKDRR 357 (543)
T ss_dssp -----------CCEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred -----------cCceECCCCCEEEEEecCCCeEEEEECCCCe
Confidence 67999999998764 25 99999999998
No 137
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.15 E-value=4.2e-09 Score=96.97 Aligned_cols=130 Identities=14% Similarity=0.080 Sum_probs=91.2
Q ss_pred EEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccC-----------c----------eE-----
Q psy2085 38 LIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDS-----------E----------VV----- 91 (358)
Q Consensus 38 liqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~-----------e----------~v----- 91 (358)
+++.+..+..+.+++|+|||++|+++ ++.|.+||+.+......-.... . .+
T Consensus 127 ~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~ 203 (337)
T 1pby_B 127 RRKAFEAPRQITMLAWARDGSKLYGL---GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFY 203 (337)
T ss_dssp EEEEEECCSSCCCEEECTTSSCEEEE---SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEE
T ss_pred EEEEEeCCCCcceeEECCCCCEEEEe---CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeee
Confidence 34455556678899999999988765 5789999998654321100000 0 00
Q ss_pred ----------------EEEEeec-----------CCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCC
Q psy2085 92 ----------------TFEILSD-----------DYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFN 144 (358)
Q Consensus 92 ----------------~f~~LS~-----------D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~ 144 (358)
.+.++.. .+...+++++|+|++..++++ ++.|.+||+.+++.+..+..+..
T Consensus 204 ~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~ 281 (337)
T 1pby_B 204 TARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHS 281 (337)
T ss_dssp EEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSC
T ss_pred ccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCc
Confidence 0111111 111356789999999988887 79999999999998888876543
Q ss_pred ccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 145 CISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 145 ~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+ .++.|+|+|++|++ .| .|.+||..+++
T Consensus 282 ~------------------~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 282 Y------------------YSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp C------------------CEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred e------------------eeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 3 67999999998875 45 99999999988
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.14 E-value=2.2e-09 Score=99.93 Aligned_cols=130 Identities=8% Similarity=-0.013 Sum_probs=92.8
Q ss_pred EEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCC--CCCeeEEEEcCCCCE
Q psy2085 38 LIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDY--SSELNSIAINPVHQL 115 (358)
Q Consensus 38 liqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~--s~~In~i~~np~~~l 115 (358)
+++.+........++|+|||+++++++..++.|.+||+.+......-...... .+.+ ...+.+++|+|+++.
T Consensus 81 ~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~s~dg~~ 154 (353)
T 3vgz_A 81 VTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRK------RTEEVRPLQPRELVADDATNT 154 (353)
T ss_dssp EEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCC------CCSSCCCCEEEEEEEETTTTE
T ss_pred EEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCc------cccccCCCCCceEEECCCCCE
Confidence 44455555667889999999998888887899999999875432111100000 0000 012688999999986
Q ss_pred EEEEe--CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 116 ICVGT--IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 116 lasGs--~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
+++++ .++.|.+||+.+++.+..+..+.... ..+.|+|+|+.|+.+ | .|.+||..+++
T Consensus 155 l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-----------------~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~ 217 (353)
T 3vgz_A 155 VYISGIGKESVIWVVDGGNIKLKTAIQNTGKMS-----------------TGLALDSEGKRLYTTNADGELITIDTADNK 217 (353)
T ss_dssp EEEEEESSSCEEEEEETTTTEEEEEECCCCTTC-----------------CCCEEETTTTEEEEECTTSEEEEEETTTTE
T ss_pred EEEEecCCCceEEEEcCCCCceEEEecCCCCcc-----------------ceEEECCCCCEEEEEcCCCeEEEEECCCCe
Confidence 65554 58999999999999988887333222 679999999988864 4 89999999988
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.14 E-value=8e-10 Score=99.05 Aligned_cols=118 Identities=16% Similarity=0.046 Sum_probs=85.9
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe-CC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT-IE 122 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs-~D 122 (358)
....+.+++|+|||++|+.++..++.++||++.....+... +. .....+.+++|+|++..|++++ .+
T Consensus 127 ~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~-----------~~-~~~~~~~~~~~s~dg~~l~~~~~~~ 194 (297)
T 2ojh_A 127 KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR-----------LT-HGEGRNDGPDYSPDGRWIYFNSSRT 194 (297)
T ss_dssp SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE-----------CC-CSSSCEEEEEECTTSSEEEEEECTT
T ss_pred cCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE-----------cc-cCCCccccceECCCCCEEEEEecCC
Confidence 34458899999999999877878899999997532211111 00 1115689999999999777666 59
Q ss_pred CeEEEEeCC-CCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec------------ceEEEECC
Q psy2085 123 GKVEAWDPR-MKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD------------DDQAWTKE 187 (358)
Q Consensus 123 GtV~iWD~R-s~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD------------~IKIWD~~ 187 (358)
+.+++|++. .+..+..+..+...+ ..+.|+|+|++|+. .| .|.+||+.
T Consensus 195 ~~~~i~~~~~~~~~~~~~~~~~~~~-----------------~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 195 GQMQIWRVRVDGSSVERITDSAYGD-----------------WFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp SSCEEEEEETTSSCEEECCCCSEEE-----------------EEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred CCccEEEECCCCCCcEEEecCCccc-----------------CCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecC
Confidence 999999986 455566666554433 67999999998874 22 39999999
Q ss_pred CCc
Q psy2085 188 IKK 190 (358)
Q Consensus 188 tG~ 190 (358)
+++
T Consensus 258 ~~~ 260 (297)
T 2ojh_A 258 GGN 260 (297)
T ss_dssp SCS
T ss_pred CCC
Confidence 887
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.13 E-value=1.6e-09 Score=96.99 Aligned_cols=127 Identities=13% Similarity=0.057 Sum_probs=76.7
Q ss_pred eeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCC-Cceeeee-eccCceEEEEEeecCC------------C------
Q psy2085 42 FEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDN-LSMKFER-CFDSEVVTFEILSDDY------------S------ 101 (358)
Q Consensus 42 fe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~-lslk~~r-~~d~e~v~f~~LS~D~------------s------ 101 (358)
+.++..+.+++|||||++|+++ + ++.|.+||+.+ ....... ......+....+++|. .
T Consensus 38 ~~~~~~v~~~~~spdg~~l~~~-~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~ 115 (297)
T 2ojh_A 38 WQTPELFEAPNWSPDGKYLLLN-S-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLL 115 (297)
T ss_dssp EEESSCCEEEEECTTSSEEEEE-E-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEE
T ss_pred ccCCcceEeeEECCCCCEEEEE-c-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEE
Confidence 4467889999999999988654 3 78999999987 4332110 0000000000011110 0
Q ss_pred -------------CCeeEEEEcCCCCEEE-EEeCCCeEEEEeCCC-CceeEEEeCCCCccccccCCCccccccCCCceee
Q psy2085 102 -------------SELNSIAINPVHQLIC-VGTIEGKVEAWDPRM-KVKAGTLDCAFNCISNERDTEEKEGKASSDESSE 166 (358)
Q Consensus 102 -------------~~In~i~~np~~~lla-sGs~DGtV~iWD~Rs-~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI 166 (358)
..+++++|+|+++.|+ +++.||.+++|++.. ......+..+...+ ..+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----------------~~~ 178 (297)
T 2ojh_A 116 PSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRN-----------------DGP 178 (297)
T ss_dssp ETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCE-----------------EEE
T ss_pred ECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCcc-----------------ccc
Confidence 3467777777777555 666777777777432 12223333333222 789
Q ss_pred EEcCCCCEEEE-e--c-ceEEEECC
Q psy2085 167 EEEEEEEEEES-S--D-DDQAWTKE 187 (358)
Q Consensus 167 ~fs~d~~~llS-a--D-~IKIWD~~ 187 (358)
.|+|+|+.|+. + | .++||+..
T Consensus 179 ~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 179 DYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEE
T ss_pred eECCCCCEEEEEecCCCCccEEEEC
Confidence 99999998773 3 6 99999875
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.12 E-value=2.8e-09 Score=98.95 Aligned_cols=109 Identities=12% Similarity=0.083 Sum_probs=81.7
Q ss_pred EEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC---eEE
Q psy2085 50 SVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG---KVE 126 (358)
Q Consensus 50 ~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG---tV~ 126 (358)
+++|+|||++|++++..+++|.+||+.+..+. .+. +... ...+.+++|+|+++.|+++..++ .|.
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~-~~~----------~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~i~ 111 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK-VVA----------IQEG-QSSMADVDITPDDQFAVTVTGLNHPFNMQ 111 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSSCE-EEE----------EEEC-SSCCCCEEECTTSSEEEECCCSSSSCEEE
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee-EEe----------cccC-CCCccceEECCCCCEEEEecCCCCcccEE
Confidence 99999999999888877889999999865431 100 0111 13344499999999888655553 999
Q ss_pred EEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe---c-c-eEEEECCC
Q psy2085 127 AWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS---D-D-DQAWTKEI 188 (358)
Q Consensus 127 iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa---D-~-IKIWD~~t 188 (358)
+||+.+++.+..+..+..+ ..+.|+|+|++|+.+ + . |.+|++..
T Consensus 112 v~d~~~~~~~~~~~~~~~~------------------~~~~~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 112 SYSFLKNKFISTIPIPYDA------------------VGIAISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp EEETTTTEEEEEEECCTTE------------------EEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred EEECCCCCeEEEEECCCCc------------------cceEECCCCCEEEEEecCCCceEEEEEECC
Confidence 9999999988888765443 789999999877643 3 6 99999875
No 142
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.12 E-value=3.9e-09 Score=99.18 Aligned_cols=134 Identities=11% Similarity=0.126 Sum_probs=89.1
Q ss_pred ceeEEEEeeCC--CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC--CCeeEEEEc
Q psy2085 35 RIELIQDFEMP--GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS--SELNSIAIN 110 (358)
Q Consensus 35 rIeliqdfe~~--~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s--~~In~i~~n 110 (358)
++..+..+..+ .....++|||||++|++++..++.|.+|++.....++... ..+..+..++. ..+..++|+
T Consensus 174 ~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~i~~s 248 (347)
T 3hfq_A 174 QLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQL-----GIVKTIPADYTAHNGAAAIRLS 248 (347)
T ss_dssp CEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEE-----EEEESSCTTCCSCCEEEEEEEC
T ss_pred cEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEe-----eeeeecCCCCCCCCcceeEEEC
Confidence 34445555443 3578899999999998888888999999987422121100 00111111111 348899999
Q ss_pred CCCCEE-EEEeCCCeEEEEeCCCC---ceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c--ceE
Q psy2085 111 PVHQLI-CVGTIEGKVEAWDPRMK---VKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D--DDQ 182 (358)
Q Consensus 111 p~~~ll-asGs~DGtV~iWD~Rs~---~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D--~IK 182 (358)
|+++.| +++..+++|.+||+... ..+..+..+.... ..++|+|+|++|+++ + .|.
T Consensus 249 pdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~-----------------~~~~~spdg~~l~v~~~~~~~v~ 311 (347)
T 3hfq_A 249 HDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFP-----------------RDFDLDPTEAFVVVVNQNTDNAT 311 (347)
T ss_dssp TTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCC-----------------CEEEECTTSSEEEEEETTTTEEE
T ss_pred CCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCc-----------------CeEEECCCCCEEEEEEcCCCcEE
Confidence 999865 66677999999998732 3455555433222 779999999988753 3 899
Q ss_pred EE--ECCCCc
Q psy2085 183 AW--TKEIKK 190 (358)
Q Consensus 183 IW--D~~tG~ 190 (358)
|| |..+|+
T Consensus 312 v~~~d~~tg~ 321 (347)
T 3hfq_A 312 LYARDLTSGK 321 (347)
T ss_dssp EEEECTTTCC
T ss_pred EEEEeCCCCe
Confidence 99 666777
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.11 E-value=4.9e-10 Score=115.84 Aligned_cols=33 Identities=21% Similarity=0.161 Sum_probs=25.7
Q ss_pred CEeEEEEcCCCCEEEEEEe--------cCCeEEEEEcCCCc
Q psy2085 47 VSTSVRISPDGQYVLSTGI--------YKPRVRCYETDNLS 79 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~--------~d~~IrvwDl~~ls 79 (358)
.+.+++|||||++|+.++. +++.|.+||+.+..
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 102 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD 102 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCc
Confidence 3899999999999866542 13789999998654
No 144
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.08 E-value=8.7e-09 Score=95.86 Aligned_cols=117 Identities=6% Similarity=-0.012 Sum_probs=87.7
Q ss_pred EeEEEEcCCCCEEEEEE-ecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEE
Q psy2085 48 STSVRISPDGQYVLSTG-IYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVE 126 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG-~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~ 126 (358)
..++.|+|||++|++++ ..+++|.+||+.+.... +.. . .....+++++|+|+++.|++++.+|.|.
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~--~~~----------~-~~~~~~~~~~~s~dg~~l~~~~~~~~i~ 209 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLK--TAI----------Q-NTGKMSTGLALDSEGKRLYTTNADGELI 209 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEE--EEE----------C-CCCTTCCCCEEETTTTEEEEECTTSEEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCceE--EEe----------c-CCCCccceEEECCCCCEEEEEcCCCeEE
Confidence 68899999999987776 34788999999865322 111 1 0013478899999999999999999999
Q ss_pred EEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe---c-ceEEEECCCCc
Q psy2085 127 AWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS---D-DDQAWTKEIKK 190 (358)
Q Consensus 127 iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa---D-~IKIWD~~tG~ 190 (358)
+||+.+++.+..+....... ...|..+.|+|+|+.|+.+ + .|.+||..+|+
T Consensus 210 ~~d~~~~~~~~~~~~~~~~~-------------~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 210 TIDTADNKILSRKKLLDDGK-------------EHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN 264 (353)
T ss_dssp EEETTTTEEEEEEECCCSSS-------------CCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC
T ss_pred EEECCCCeEEEEEEcCCCCC-------------CcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 99999999888876522110 0001679999999987742 3 99999999988
No 145
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.07 E-value=1e-09 Score=113.99 Aligned_cols=128 Identities=11% Similarity=0.014 Sum_probs=86.0
Q ss_pred CCCEeEEEEcCCCCEEEEEEecCC-----eEEEEEcCCCceeeeeeccCceEEEEEeecCC-----------CCCeeEEE
Q psy2085 45 PGVSTSVRISPDGQYVLSTGIYKP-----RVRCYETDNLSMKFERCFDSEVVTFEILSDDY-----------SSELNSIA 108 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~~d~-----~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~-----------s~~In~i~ 108 (358)
+..+++++|||||++|+.++..++ +|.+||+.+.............-+...++.+- ...|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456899999999999865443266 89999998754321111100000000000000 01378999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCc--eeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEE
Q psy2085 109 INPVHQLICVGTIEGKVEAWDPRMKV--KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAW 184 (358)
Q Consensus 109 ~np~~~llasGs~DGtV~iWD~Rs~~--~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIW 184 (358)
|||+++.|++++. ++|.+||+.++. .+..+..+...+ ..++|||||++|++ .+ .|.+|
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~-----------------~~~~~SPDG~~la~~~~~~i~~~ 177 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFA-----------------TDAKLSPKGGFVSFIRGRNLWVI 177 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCE-----------------EEEEECTTSSEEEEEETTEEEEE
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCccc-----------------ccccCCCCCCEEEEEeCCcEEEE
Confidence 9999999999886 999999998873 334444443333 77999999999886 67 99999
Q ss_pred ECCCCc
Q psy2085 185 TKEIKK 190 (358)
Q Consensus 185 D~~tG~ 190 (358)
|+.+|+
T Consensus 178 d~~~g~ 183 (741)
T 2ecf_A 178 DLASGR 183 (741)
T ss_dssp ETTTTE
T ss_pred ecCCCC
Confidence 999887
No 146
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.06 E-value=7.2e-09 Score=96.06 Aligned_cols=130 Identities=10% Similarity=0.079 Sum_probs=89.7
Q ss_pred eEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccC---------------------c---eEE
Q psy2085 37 ELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDS---------------------E---VVT 92 (358)
Q Consensus 37 eliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~---------------------e---~v~ 92 (358)
+.+..+.++..+.+++|+|||+ |++++ +.|.+||+.+......-.... . ...
T Consensus 139 ~~~~~~~~~~~~~~~~~s~dg~-l~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (349)
T 1jmx_B 139 KPVRTFPMPRQVYLMRAADDGS-LYVAG---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLY 214 (349)
T ss_dssp CCSEEEECCSSCCCEEECTTSC-EEEES---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEE
T ss_pred ceeeeccCCCcccceeECCCCc-EEEcc---CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeee
Confidence 3445566777889999999999 66643 349999998654321111000 0 000
Q ss_pred EEEeecC-------------------------------CCCCeeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEe
Q psy2085 93 FEILSDD-------------------------------YSSELNSIAINP-VHQLICVGTIEGKVEAWDPRMKVKAGTLD 140 (358)
Q Consensus 93 f~~LS~D-------------------------------~s~~In~i~~np-~~~llasGs~DGtV~iWD~Rs~~~i~~L~ 140 (358)
...+++| ....+.+++|+| ++++++++ ++.|.+||+.+++.+..+.
T Consensus 215 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~ 292 (349)
T 1jmx_B 215 TIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN 292 (349)
T ss_dssp EEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE
T ss_pred eeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc
Confidence 0111111 012567889999 99988887 8999999999999888887
Q ss_pred CCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 141 CAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 141 ~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+..+ ..++|+|+|++|++ .| .|++||..+++
T Consensus 293 ~~~~~------------------~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 293 LDHTY------------------YCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp CSSCC------------------CEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred CCCCc------------------cceEECCCCCEEEEecCCCeEEEEeccccc
Confidence 54433 67999999988875 35 99999999887
No 147
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.06 E-value=2.4e-09 Score=100.69 Aligned_cols=133 Identities=9% Similarity=0.028 Sum_probs=83.3
Q ss_pred eEEEEeeCCCCEeEEEEcCCCCEEEEEEec--CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC
Q psy2085 37 ELIQDFEMPGVSTSVRISPDGQYVLSTGIY--KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ 114 (358)
Q Consensus 37 eliqdfe~~~~v~~v~~SpDG~~LlatG~~--d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ 114 (358)
+.+...........++|||||+ |++++.. ++.|.+||+....++..... ... ...+..++|+|+++
T Consensus 31 ~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~---------~~~--~~~p~~~a~spdg~ 98 (347)
T 3hfq_A 31 TNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTV---------VAP--GTPPAYVAVDEARQ 98 (347)
T ss_dssp EEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEE---------EEE--SCCCSEEEEETTTT
T ss_pred EEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeee---------ecC--CCCCEEEEECCCCC
Confidence 3344444445667899999999 7766643 67999999965443221110 001 14678999999999
Q ss_pred EEEEEe-CCCeEEEEeCCCCc---eeEEEeCCC-CccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEEC
Q psy2085 115 LICVGT-IEGKVEAWDPRMKV---KAGTLDCAF-NCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTK 186 (358)
Q Consensus 115 llasGs-~DGtV~iWD~Rs~~---~i~~L~~~~-~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~ 186 (358)
+|++++ .+|+|.+||+.... .+..+.... .+. ... ....|..+.|+|+|+.+++ .+ .|.+||+
T Consensus 99 ~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~-~~~--------~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~ 169 (347)
T 3hfq_A 99 LVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPR-PEQ--------DGSHIHYTDLTPDNRLAVIDLGSDKVYVYNV 169 (347)
T ss_dssp EEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSS-TTC--------SSCCEEEEEECTTSCEEEEETTTTEEEEEEE
T ss_pred EEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCC-ccc--------cCCCceEEEECCCCcEEEEeCCCCEEEEEEE
Confidence 777777 78999999996332 233332211 110 000 0011267999999994444 24 8999999
Q ss_pred C-CCc
Q psy2085 187 E-IKK 190 (358)
Q Consensus 187 ~-tG~ 190 (358)
. +|+
T Consensus 170 ~~~g~ 174 (347)
T 3hfq_A 170 SDAGQ 174 (347)
T ss_dssp CTTSC
T ss_pred CCCCc
Confidence 8 565
No 148
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.04 E-value=1.2e-08 Score=104.46 Aligned_cols=148 Identities=9% Similarity=-0.027 Sum_probs=99.6
Q ss_pred EeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEc--CCCceeeeee
Q psy2085 8 QTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYET--DNLSMKFERC 85 (358)
Q Consensus 8 ~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl--~~lslk~~r~ 85 (358)
+.+.+.++..|+.... ++++.+.....+.+++|||||++|+++ +.+++|++||+ .++. ....
T Consensus 154 s~~~d~~V~v~D~~t~-------------~~~~~i~~g~~~~~v~~spdg~~l~v~-~~d~~V~v~D~~~~t~~--~~~~ 217 (543)
T 1nir_A 154 TLRDAGQIALVDGDSK-------------KIVKVIDTGYAVHISRMSASGRYLLVI-GRDARIDMIDLWAKEPT--KVAE 217 (543)
T ss_dssp EEGGGTEEEEEETTTC-------------CEEEEEECSTTEEEEEECTTSCEEEEE-ETTSEEEEEETTSSSCE--EEEE
T ss_pred EEcCCCeEEEEECCCc-------------eEEEEEecCcccceEEECCCCCEEEEE-CCCCeEEEEECcCCCCc--EEEE
Confidence 4455666777763222 345555534448899999999998765 46799999999 5432 2211
Q ss_pred ccCceEEEEEeecCCCCCeeEEEEcC----CCCEEEEEeC-CCeEEEEeCCCCceeEEEeCCCCcccc-ccCCCcccccc
Q psy2085 86 FDSEVVTFEILSDDYSSELNSIAINP----VHQLICVGTI-EGKVEAWDPRMKVKAGTLDCAFNCISN-ERDTEEKEGKA 159 (358)
Q Consensus 86 ~d~e~v~f~~LS~D~s~~In~i~~np----~~~llasGs~-DGtV~iWD~Rs~~~i~~L~~~~~~v~~-~~~i~gl~GtR 159 (358)
+ .. ...+..++|+| ++++|++++. +++|.+||..+++++.++..+...+.. .+..
T Consensus 218 i----------~~--g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~------- 278 (543)
T 1nir_A 218 I----------KI--GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHP------- 278 (543)
T ss_dssp E----------EC--CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEES-------
T ss_pred E----------ec--CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCcccccc-------
Confidence 1 11 14578999999 9999988884 899999999999999988753211100 0000
Q ss_pred CCCceeeEEcCCCCEEE-E--ec-ceEEEECCCCc
Q psy2085 160 SSDESSEEEEEEEEEEE-S--SD-DDQAWTKEIKK 190 (358)
Q Consensus 160 s~~P~sI~fs~d~~~ll-S--aD-~IKIWD~~tG~ 190 (358)
.+.+..|.|+|++..++ + .| .|.+||..+++
T Consensus 279 ~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~ 313 (543)
T 1nir_A 279 EPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDID 313 (543)
T ss_dssp CCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSS
T ss_pred CCceEEEEECCCCCEEEEEECCCCeEEEEEecCCC
Confidence 00116799999887665 4 24 99999998765
No 149
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.03 E-value=6.6e-09 Score=98.32 Aligned_cols=120 Identities=8% Similarity=-0.012 Sum_probs=82.3
Q ss_pred CCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC--C
Q psy2085 45 PGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI--E 122 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~--D 122 (358)
......++|||||++|++++..+++|.+||+.+..+..... .. ..+........++|+|++++|++++. +
T Consensus 210 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~-------~~-~~~~~~~~~~~i~~spdg~~l~v~~~~~~ 281 (361)
T 3scy_A 210 GSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQT-------VA-ADTVNAQGSGDIHLSPDGKYLYASNRLKA 281 (361)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEE-------EE-SCSSCCCCEEEEEECTTSSEEEEEECSSS
T ss_pred CCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEE-------Ee-cCCCCCCCcccEEECCCCCEEEEECCCCC
Confidence 44678999999999998877678999999997543321111 11 11111145789999999997755554 5
Q ss_pred CeEEEEeCC--CCc--eeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe---c-ceEEE--ECCCCc
Q psy2085 123 GKVEAWDPR--MKV--KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS---D-DDQAW--TKEIKK 190 (358)
Q Consensus 123 GtV~iWD~R--s~~--~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa---D-~IKIW--D~~tG~ 190 (358)
++|.+||+. +++ .+..+.....+ ..++|+|+|++|+++ + .|.|| |..+|+
T Consensus 282 ~~i~v~~~~~~~g~~~~~~~~~~g~~~------------------~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~ 341 (361)
T 3scy_A 282 DGVAIFKVDETNGTLTKVGYQLTGIHP------------------RNFIITPNGKYLLVACRDTNVIQIFERDQATGL 341 (361)
T ss_dssp CEEEEEEECTTTCCEEEEEEEECSSCC------------------CEEEECTTSCEEEEEETTTTEEEEEEECTTTCC
T ss_pred CEEEEEEEcCCCCcEEEeeEecCCCCC------------------ceEEECCCCCEEEEEECCCCCEEEEEEECCCCc
Confidence 999999985 444 34445442112 779999999988753 3 89995 556776
No 150
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.99 E-value=2e-09 Score=111.74 Aligned_cols=115 Identities=11% Similarity=-0.027 Sum_probs=71.7
Q ss_pred CEeEEEEcCCCCEEEEEEe--------cCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEE
Q psy2085 47 VSTSVRISPDGQYVLSTGI--------YKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICV 118 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~--------~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llas 118 (358)
.+.+++|||||++|+.++. .+++|++||+.+......+.+ ...+.+++|||+++.||+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l--------------~~~~~~~~~SPDG~~la~ 126 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL--------------PRPIQYLCWSPVGSKLAY 126 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC--------------CSSBCCEEECSSTTCEEE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec--------------CcccccceECCCCCEEEE
Confidence 3889999999999865543 258999999987542100111 045889999999999999
Q ss_pred EeCCCeEEEEeCCCCceeEEEe-CCCCccccccCCCccc-cccCCCceeeEEcCCCCEEEE
Q psy2085 119 GTIEGKVEAWDPRMKVKAGTLD-CAFNCISNERDTEEKE-GKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 119 Gs~DGtV~iWD~Rs~~~i~~L~-~~~~~v~~~~~i~gl~-GtRs~~P~sI~fs~d~~~llS 177 (358)
++ |+.|.+||+.++.+..... ++...+... ..+.+. ..-......+.|||||+.|++
T Consensus 127 ~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g-~~~~v~~ee~~~~~~~~~wSPDG~~la~ 185 (719)
T 1z68_A 127 VY-QNNIYLKQRPGDPPFQITFNGRENKIFNG-IPDWVYEEEMLATKYALWWSPNGKFLAY 185 (719)
T ss_dssp EE-TTEEEEESSTTSCCEECCCCCBTTTEEES-SCCHHHHHHTTCSSCCEEECTTSSEEEE
T ss_pred EE-CCeEEEEeCCCCCcEEEecCCCcCCeEcc-cccceeeeecccCcccEEECCCCCEEEE
Confidence 86 7899999999887654321 211111000 000000 000000046999999999985
No 151
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.98 E-value=6.8e-09 Score=105.28 Aligned_cols=107 Identities=10% Similarity=0.042 Sum_probs=80.2
Q ss_pred eEEEEcCCCCEEEEEEecC----CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC-
Q psy2085 49 TSVRISPDGQYVLSTGIYK----PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG- 123 (358)
Q Consensus 49 ~~v~~SpDG~~LlatG~~d----~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG- 123 (358)
.+++|||||++|++++ .+ ++|.+||+.+...+.. . ++.+.++.++|+|+++.|+++..+|
T Consensus 153 ~~~~~spDG~~la~~~-~~~~~~~~i~~~d~~~g~~~~l--~------------~~~~~~~~~~~SpDG~~l~~~~~~~~ 217 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLG-FFGGGRVSLFTSNLSSGGLRVF--D------------SGEGSFSSASISPGMKVTAGLETARE 217 (582)
T ss_dssp CEEEEEEETTEEEEEE-EEETTEEEEEEEETTTCCCEEE--C------------CSSCEEEEEEECTTSCEEEEEECSSC
T ss_pred ceEEECCCCCEEEEEE-EcCCCCeEEEEEcCCCCCceEe--e------------cCCCccccceECCCCCEEEEccCCCe
Confidence 8999999999986554 34 6799999886543211 1 1114679999999999999888899
Q ss_pred -eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeE--------EcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 124 -KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEE--------EEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 124 -tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~--------fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+|.+||+.+++.. .+..+...+ ..+. |+|||..+++ .| +++||++ |+
T Consensus 218 ~~i~~~d~~~~~~~-~~~~~~~~~-----------------~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~ 276 (582)
T 3o4h_A 218 ARLVTVDPRDGSVE-DLELPSKDF-----------------SSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GE 276 (582)
T ss_dssp EEEEEECTTTCCEE-ECCCSCSHH-----------------HHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TE
T ss_pred eEEEEEcCCCCcEE-EccCCCcCh-----------------hhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CC
Confidence 9999999998877 665554433 2344 9999976666 35 9999998 65
No 152
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.95 E-value=8.1e-09 Score=107.18 Aligned_cols=113 Identities=10% Similarity=-0.043 Sum_probs=72.1
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCC---ceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNL---SMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG 123 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~l---slk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG 123 (358)
.+.+++|||||++|+.++ . ++|.+||+.+. ..... . .+...+.+++|||+++.||+++ ++
T Consensus 110 ~v~~~~~SpDg~~l~~~~-~-~~i~~~d~~~~~~~~~~~l--~------------~~~~~~~~~~~SPDG~~la~~~-~~ 172 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPL-G-GELYLYDLKQEGKAAVRQL--T------------HGEGFATDAKLSPKGGFVSFIR-GR 172 (741)
T ss_dssp ESCCCEECTTSSEEEEEE-T-TEEEEEESSSCSTTSCCBC--C------------CSSSCEEEEEECTTSSEEEEEE-TT
T ss_pred CcceeEECCCCCEEEEEe-C-CcEEEEECCCCCcceEEEc--c------------cCCcccccccCCCCCCEEEEEe-CC
Confidence 378899999999986654 3 89999999865 32110 0 0115689999999999999987 56
Q ss_pred eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 124 KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
.|.+||+.+++.......+...+..... +.+.......+..+.|||||++|++
T Consensus 173 ~i~~~d~~~g~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~~~SpDg~~l~~ 225 (741)
T 2ecf_A 173 NLWVIDLASGRQMQLTADGSTTIGNGIA-EFVADEEMDRHTGYWWAPDDSAIAY 225 (741)
T ss_dssp EEEEEETTTTEEEECCCCCCSSEEESCC-CHHHHHHSCCCCSEEECTTSSCEEE
T ss_pred cEEEEecCCCCEEEeccCCccceecccc-ceeeeeccccccceEECCCCCEEEE
Confidence 9999999988765444333221100000 0000000000156999999998885
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.87 E-value=2.5e-09 Score=111.01 Aligned_cols=115 Identities=7% Similarity=-0.032 Sum_probs=82.3
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC--
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI-- 121 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~-- 121 (358)
+.....+++|||||+++ +++ .+++|++||+.+...... ++... .. ...|.+++|||+++.||+++.
T Consensus 14 ~~~~~~~~~~s~dg~~~-~~~-~d~~i~~~~~~~g~~~~~--~~~~~-----~~---~~~~~~~~~SpDg~~la~~~~~~ 81 (719)
T 1z68_A 14 FSYKTFFPNWISGQEYL-HQS-ADNNIVLYNIETGQSYTI--LSNRT-----MK---SVNASNYGLSPDRQFVYLESDYS 81 (719)
T ss_dssp TCCCCCCCEESSSSEEE-EEC-TTSCEEEEESSSCCEEEE--ECHHH-----HH---TTTCSEEEECTTSSEEEEEEEEE
T ss_pred ccCCCCccEECCCCeEE-EEc-CCCCEEEEEcCCCcEEEE--Ecccc-----cc---ccceeeEEECCCCCeEEEEecCc
Confidence 33445688999999755 444 588999999987543211 10000 00 014889999999999999887
Q ss_pred -------CCeEEEEeCCCCcee--EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCCCc
Q psy2085 122 -------EGKVEAWDPRMKVKA--GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEIKK 190 (358)
Q Consensus 122 -------DGtV~iWD~Rs~~~i--~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~tG~ 190 (358)
+++|.+||+.+++.+ ..+. ..+ ..++|||||+.|++ .| .|++||..+|+
T Consensus 82 ~~~~~s~~~~i~~~d~~~g~~~~~~~l~---~~~-----------------~~~~~SPDG~~la~~~~~~i~~~~~~~g~ 141 (719)
T 1z68_A 82 KLWRYSYTATYYIYDLSNGEFVRGNELP---RPI-----------------QYLCWSPVGSKLAYVYQNNIYLKQRPGDP 141 (719)
T ss_dssp ECSSSCEEEEEEEEETTTTEECCSSCCC---SSB-----------------CCEEECSSTTCEEEEETTEEEEESSTTSC
T ss_pred eeEEeecceEEEEEECCCCccccceecC---ccc-----------------ccceECCCCCEEEEEECCeEEEEeCCCCC
Confidence 799999999998763 1221 112 67999999999886 67 99999998876
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.87 E-value=3.9e-08 Score=92.95 Aligned_cols=124 Identities=13% Similarity=0.086 Sum_probs=82.1
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce----e-eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe-C
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSM----K-FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT-I 121 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl----k-~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs-~ 121 (358)
+.+++|||||++|++++..++.|.+|++..... + +.... .. ....+... ..+++++|+|+++++++++ .
T Consensus 157 ~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~--~~-~~~~~~~~--~~~~~~~~spdg~~l~v~~~~ 231 (361)
T 3scy_A 157 LHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKG--TP-EAFKVAPG--SGPRHLIFNSDGKFAYLINEI 231 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEE--EE-EEEECCTT--CCEEEEEECTTSSEEEEEETT
T ss_pred ceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecc--cc-cceecCCC--CCCeEEEEcCCCCEEEEEcCC
Confidence 478999999999988877788999999875331 1 11000 00 01111111 4678999999999776666 6
Q ss_pred CCeEEEEeCCCCce--eEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE---e-c-ceEEEECC--CCc
Q psy2085 122 EGKVEAWDPRMKVK--AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES---S-D-DDQAWTKE--IKK 190 (358)
Q Consensus 122 DGtV~iWD~Rs~~~--i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS---a-D-~IKIWD~~--tG~ 190 (358)
+++|.+||+.++.. +..+....... ..|..|.|+|+|++|+. . + .|.||++. +|+
T Consensus 232 ~~~v~v~~~~~g~~~~~~~~~~~~~~~--------------~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~ 295 (361)
T 3scy_A 232 GGTVIAFRYADGMLDEIQTVAADTVNA--------------QGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT 295 (361)
T ss_dssp TCEEEEEEEETTEEEEEEEEESCSSCC--------------CCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC
T ss_pred CCeEEEEEecCCceEEeEEEecCCCCC--------------CCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc
Confidence 99999999987754 33333211100 01167999999998864 3 5 89999995 555
No 155
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.86 E-value=1.5e-09 Score=112.21 Aligned_cols=117 Identities=9% Similarity=-0.068 Sum_probs=83.7
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC---CCeeEEEEcCCCCEEEEEe
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS---SELNSIAINPVHQLICVGT 120 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s---~~In~i~~np~~~llasGs 120 (358)
+...+.+++|||||+++ ++ +.+++|++||+.+...+.. +. .+. ..|.+++|||+++.|++++
T Consensus 15 ~~~~~~~~~~spdg~~~-~~-~~dg~i~~~d~~~g~~~~~------------~~-~~~~~~~~v~~~~~SpDg~~l~~~~ 79 (723)
T 1xfd_A 15 FKIHDPEAKWISDTEFI-YR-EQKGTVRLWNVETNTSTVL------------IE-GKKIESLRAIRYEISPDREYALFSY 79 (723)
T ss_dssp TCCCCCCCCBSSSSCBC-CC-CSSSCEEEBCGGGCCCEEE------------EC-TTTTTTTTCSEEEECTTSSEEEEEE
T ss_pred CcccccccEEcCCCcEE-EE-eCCCCEEEEECCCCcEEEE------------ec-cccccccccceEEECCCCCEEEEEe
Confidence 33457889999999976 44 4688999999986532211 11 111 1489999999999999998
Q ss_pred CC---------CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCCC
Q psy2085 121 IE---------GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEIK 189 (358)
Q Consensus 121 ~D---------GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~tG 189 (358)
.+ +.|.+||+.+++. ..+....... ..+ ..++|||||+.|++ ++ .|.+||..+|
T Consensus 80 ~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~---~~~-----------~~~~~SPdG~~la~~~~~~i~~~~~~~g 144 (723)
T 1xfd_A 80 NVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSN---AKL-----------QYAGWGPKGQQLIFIFENNIYYCAHVGK 144 (723)
T ss_dssp SCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCS---CCC-----------SBCCBCSSTTCEEEEETTEEEEESSSSS
T ss_pred cCccceeecceeeEEEEECCCCce-EeccCCcccc---ccc-----------cccEECCCCCEEEEEECCeEEEEECCCC
Confidence 75 7888999998875 3343221110 001 66899999999886 67 9999999988
Q ss_pred c
Q psy2085 190 K 190 (358)
Q Consensus 190 ~ 190 (358)
+
T Consensus 145 ~ 145 (723)
T 1xfd_A 145 Q 145 (723)
T ss_dssp C
T ss_pred c
Confidence 7
No 156
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.85 E-value=2.4e-08 Score=103.14 Aligned_cols=130 Identities=9% Similarity=-0.064 Sum_probs=84.5
Q ss_pred EeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCC-----Cceee-eeeccCceEEEEEeecCCCCCeeEEEEcCCCC
Q psy2085 41 DFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDN-----LSMKF-ERCFDSEVVTFEILSDDYSSELNSIAINPVHQ 114 (358)
Q Consensus 41 dfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~-----lslk~-~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ 114 (358)
...++..+.+++|||||++|+.+ .++.|.+||+.+ ..... .......+......-......+.+++|||+++
T Consensus 116 l~~~~~~~~~~~~SpdG~~la~~--~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~ 193 (706)
T 2z3z_A 116 LFDTNEETASLDFSPVGDRVAYV--RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS 193 (706)
T ss_dssp EECCTTCCTTCEECTTSSEEEEE--ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS
T ss_pred ccCCcccccCCcCCCCCCEEEEE--ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCC
Confidence 34456778899999999998653 478999999976 43221 00000000000000000002258999999999
Q ss_pred EEEEEe---------------------------------CCCeEEEEeCCCCceeEEEeC--CCCccccccCCCcccccc
Q psy2085 115 LICVGT---------------------------------IEGKVEAWDPRMKVKAGTLDC--AFNCISNERDTEEKEGKA 159 (358)
Q Consensus 115 llasGs---------------------------------~DGtV~iWD~Rs~~~i~~L~~--~~~~v~~~~~i~gl~GtR 159 (358)
.|++++ .++.|.+||+.+++....... +...+
T Consensus 194 ~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~------------- 260 (706)
T 2z3z_A 194 CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFL------------- 260 (706)
T ss_dssp EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEE-------------
T ss_pred EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeE-------------
Confidence 999987 457899999998875433321 22222
Q ss_pred CCCceeeEEcCCCCEEEE--ec------ceEEEECCCC
Q psy2085 160 SSDESSEEEEEEEEEEES--SD------DDQAWTKEIK 189 (358)
Q Consensus 160 s~~P~sI~fs~d~~~llS--aD------~IKIWD~~tG 189 (358)
..+.|+|||+.|++ .| .|.+||..+|
T Consensus 261 ----~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 261 ----TNLSWSPDENILYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp ----EEEEECTTSSEEEEEEECTTSCEEEEEEEETTTC
T ss_pred ----eeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC
Confidence 67999999998875 22 8999999998
No 157
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.83 E-value=1.7e-07 Score=90.47 Aligned_cols=79 Identities=11% Similarity=0.057 Sum_probs=59.1
Q ss_pred EEEcCCCCEEEEEeC-----------CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEE
Q psy2085 107 IAINPVHQLICVGTI-----------EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEE 175 (358)
Q Consensus 107 i~~np~~~llasGs~-----------DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~l 175 (358)
++|+|+++.+..+.. .++|.+||+.+++.+.++..+. + ..|+|+|+|++|
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p------------------~~ia~spdg~~l 319 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-A------------------LSMTIDQQRNLM 319 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-C------------------CEEEEETTTTEE
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-e------------------eEEEECCCCCEE
Confidence 577777664443322 3478888888888888887765 3 789999999999
Q ss_pred EEec--ceEEEECCCC--c---EE-ecCCCCCccccc
Q psy2085 176 ESSD--DDQAWTKEIK--K---TY-NLGPAPKWCGFL 204 (358)
Q Consensus 176 lSaD--~IKIWD~~tG--~---~y-~lgpap~Wcsfl 204 (358)
+++. +|.|||..+| + +. ..|..|.|..|.
T Consensus 320 ~v~n~~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~ 356 (361)
T 2oiz_A 320 LTLDGGNVNVYDISQPEPKLLRTIEGAAEASLQVQFH 356 (361)
T ss_dssp EEECSSCEEEEECSSSSCEEEEEETTSCSSEEEEEEC
T ss_pred EEeCCCeEEEEECCCCcceeeEEeccCCCCcEEEEec
Confidence 8754 9999999999 6 33 578888776543
No 158
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.80 E-value=4.8e-07 Score=86.41 Aligned_cols=133 Identities=6% Similarity=-0.021 Sum_probs=81.4
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcC-CCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC-
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETD-NLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI- 121 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~-~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~- 121 (358)
....+.+++|||||++|+++...+.+|++||+. +..+..... +-.+.+...+..++|+|+++.|++++.
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~---------~~~~~~g~~p~~~~~spdg~~l~v~~~~ 213 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGS---------VDAPDPGDHPRWVAMHPTGNYLYALMEA 213 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEE---------EECSSTTCCEEEEEECTTSSEEEEEETT
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeee---------EecCCCCCCCCEeEECCCCCEEEEEECC
Confidence 345689999999999987765456799999997 443321110 000111146899999999998877765
Q ss_pred CCeEEEEeCC--CCcee---EEEeC-CCCccccccCCCccccccCCCceeeE-EcCCCCEEEEe----c-----ceEEEE
Q psy2085 122 EGKVEAWDPR--MKVKA---GTLDC-AFNCISNERDTEEKEGKASSDESSEE-EEEEEEEEESS----D-----DDQAWT 185 (358)
Q Consensus 122 DGtV~iWD~R--s~~~i---~~L~~-~~~~v~~~~~i~gl~GtRs~~P~sI~-fs~d~~~llSa----D-----~IKIWD 185 (358)
+++|.+|+.. +++.. ..+.. +.......... +....|..+. |+|||++|+++ | +|.+|+
T Consensus 214 ~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~ 288 (365)
T 1jof_A 214 GNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPET-----GKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFK 288 (365)
T ss_dssp TTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTT-----SSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEE
T ss_pred CCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccccc-----ccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEE
Confidence 7899999754 55542 22321 10000000000 0000116799 99999988753 2 499999
Q ss_pred CC-CCc
Q psy2085 186 KE-IKK 190 (358)
Q Consensus 186 ~~-tG~ 190 (358)
+. +|+
T Consensus 289 ~~~~g~ 294 (365)
T 1jof_A 289 LRDCGS 294 (365)
T ss_dssp ECTTSC
T ss_pred ECCCCC
Confidence 96 676
No 159
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.78 E-value=1.2e-07 Score=103.43 Aligned_cols=116 Identities=8% Similarity=0.033 Sum_probs=87.2
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE 122 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D 122 (358)
.+...+.+++|||||++|+ +++.++.|++||+.+...+.. ...+.+.|.+++|+|+++.|++++.+
T Consensus 376 ~~~~~~~~~~~SpDG~~la-~~~~~~~v~~~d~~tg~~~~~-------------~~~~~~~v~~~~~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 376 ENLGNVFAMGVDRNGKFAV-VANDRFEIMTVDLETGKPTVI-------------ERSREAMITDFTISDNSRFIAYGFPL 441 (1045)
T ss_dssp CCCCSEEEEEECTTSSEEE-EEETTSEEEEEETTTCCEEEE-------------EECSSSCCCCEEECTTSCEEEEEEEE
T ss_pred CCccceeeeEECCCCCEEE-EECCCCeEEEEECCCCceEEe-------------ccCCCCCccceEECCCCCeEEEEecC
Confidence 4556789999999999885 566788999999986543211 11122568899999999999888775
Q ss_pred C----------eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e-c-ceEEEECCCC
Q psy2085 123 G----------KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S-D-DDQAWTKEIK 189 (358)
Q Consensus 123 G----------tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a-D-~IKIWD~~tG 189 (358)
+ +|.+||+.+++ +..+..+...+ ..+.|+|+|+.|++ + + ..++|+....
T Consensus 442 ~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~-----------------~~~~~spdG~~l~~~s~~~~~~~~~~~~~ 503 (1045)
T 1k32_A 442 KHGETDGYVMQAIHVYDMEGRK-IFAATTENSHD-----------------YAPAFDADSKNLYYLSYRSLDPSPDRVVL 503 (1045)
T ss_dssp CSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBE-----------------EEEEECTTSCEEEEEESCCCCCEECSSSS
T ss_pred ccccccCCCCCeEEEEECCCCc-EEEeeCCCccc-----------------CCceEcCCCCEEEEEecccCCcCcchhcc
Confidence 4 99999999887 55665554433 67899999998885 3 4 8888987654
Q ss_pred c
Q psy2085 190 K 190 (358)
Q Consensus 190 ~ 190 (358)
.
T Consensus 504 ~ 504 (1045)
T 1k32_A 504 N 504 (1045)
T ss_dssp C
T ss_pred c
Confidence 3
No 160
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.77 E-value=5.5e-08 Score=106.14 Aligned_cols=115 Identities=6% Similarity=-0.089 Sum_probs=89.2
Q ss_pred eCCC-CEeEEEEcCCCCEEEEEEecCCeEE-EEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe
Q psy2085 43 EMPG-VSTSVRISPDGQYVLSTGIYKPRVR-CYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT 120 (358)
Q Consensus 43 e~~~-~v~~v~~SpDG~~LlatG~~d~~Ir-vwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs 120 (358)
.+++ .+.+++|| ||+.|+.+ +.+..|. +||+....... +. .+...+.+++|+|+++.|++++
T Consensus 334 ~~~~~~~~~~~~s-dg~~l~~~-s~~~~l~~~~d~~~~~~~~-------------l~-~~~~~~~~~~~SpDG~~la~~~ 397 (1045)
T 1k32_A 334 EPLRIRYVRRGGD-TKVAFIHG-TREGDFLGIYDYRTGKAEK-------------FE-ENLGNVFAMGVDRNGKFAVVAN 397 (1045)
T ss_dssp CCSCEEEEEECSS-SEEEEEEE-ETTEEEEEEEETTTCCEEE-------------CC-CCCCSEEEEEECTTSSEEEEEE
T ss_pred CCCcceEEeeeEc-CCCeEEEE-ECCCceEEEEECCCCCceE-------------ec-CCccceeeeEECCCCCEEEEEC
Confidence 3455 78899999 99988654 4466777 88887543210 11 1225789999999999999999
Q ss_pred CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe------------c-ceEEEECC
Q psy2085 121 IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS------------D-DDQAWTKE 187 (358)
Q Consensus 121 ~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa------------D-~IKIWD~~ 187 (358)
.++.|.+||+.+++....+..+...+ ..++|||||++|+++ + .|++||+.
T Consensus 398 ~~~~v~~~d~~tg~~~~~~~~~~~~v-----------------~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 398 DRFEIMTVDLETGKPTVIERSREAMI-----------------TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp TTSEEEEEETTTCCEEEEEECSSSCC-----------------CCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred CCCeEEEEECCCCceEEeccCCCCCc-----------------cceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 99999999999998877776666554 679999999988742 3 79999999
Q ss_pred CCc
Q psy2085 188 IKK 190 (358)
Q Consensus 188 tG~ 190 (358)
+|+
T Consensus 461 ~g~ 463 (1045)
T 1k32_A 461 GRK 463 (1045)
T ss_dssp TTE
T ss_pred CCc
Confidence 877
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.74 E-value=6e-08 Score=98.30 Aligned_cols=109 Identities=10% Similarity=-0.088 Sum_probs=79.4
Q ss_pred CEeEEEEcCCCCEE-EEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC---
Q psy2085 47 VSTSVRISPDGQYV-LSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE--- 122 (358)
Q Consensus 47 ~v~~v~~SpDG~~L-latG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D--- 122 (358)
.....+|||||+.+ ++++.. ..+.|||+.+...+. -. .. .. ++++|+|+++.||+++.|
T Consensus 111 ~~~~~~~s~dg~~~~~~s~~~-~~~~l~d~~~g~~~~--l~----------~~---~~-~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 111 PMRILSGVDTGEAVVFTGATE-DRVALYALDGGGLRE--LA----------RL---PG-FGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp SBEEEEEEECSSCEEEEEECS-SCEEEEEEETTEEEE--EE----------EE---SS-CEEEEEEETTEEEEEEEEETT
T ss_pred CceeeeeCCCCCeEEEEecCC-CCceEEEccCCcEEE--ee----------cC---CC-ceEEECCCCCEEEEEEEcCCC
Confidence 35577999999764 344544 455699987643221 10 00 12 789999999999988887
Q ss_pred -CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-----ceEEEECCCCc
Q psy2085 123 -GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-----DDQAWTKEIKK 190 (358)
Q Consensus 123 -GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-----~IKIWD~~tG~ 190 (358)
++|.+||+.+++.. .|..+...+ .+++|||||+.|++++ .|.+||..+|+
T Consensus 174 ~~~i~~~d~~~g~~~-~l~~~~~~~-----------------~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLR-VFDSGEGSF-----------------SSASISPGMKVTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp EEEEEEEETTTCCCE-EECCSSCEE-----------------EEEEECTTSCEEEEEECSSCEEEEEECTTTCC
T ss_pred CeEEEEEcCCCCCce-EeecCCCcc-----------------ccceECCCCCEEEEccCCCeeEEEEEcCCCCc
Confidence 88999999888754 565554444 7799999999999643 79999999877
No 162
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.72 E-value=5.6e-08 Score=100.40 Aligned_cols=111 Identities=6% Similarity=-0.104 Sum_probs=71.0
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
..+.+++|||| ++++++. ++.|++||+.+...... .. ....+.+++|||+++.||++ .|+.|
T Consensus 82 ~~v~~~~~spd-~~~~~~~--~~~i~~~d~~~~~~~~l------------~~--~~~~~~~~~~SpdG~~la~~-~~~~i 143 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT--QGGLVGFDMLARKVTYL------------FD--TNEETASLDFSPVGDRVAYV-RNHNL 143 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE--TTEEEEEETTTTEEEEE------------EC--CTTCCTTCEECTTSSEEEEE-ETTEE
T ss_pred cCceeEEECCC-CeEEEEE--CCEEEEEECCCCceEEc------------cC--CcccccCCcCCCCCCEEEEE-ECCeE
Confidence 46899999999 6666653 58999999986432110 11 11468889999999999995 68999
Q ss_pred EEEeCCC-----CceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 126 EAWDPRM-----KVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 126 ~iWD~Rs-----~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
.+||+.+ ++.......+...+.....+ .......+..+.|||||++|++
T Consensus 144 ~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~---~~ee~~~~~~~~~SpDg~~la~ 197 (706)
T 2z3z_A 144 YIARGGKLGEGMSRAIAVTIDGTETLVYGQAV---HQREFGIEKGTFWSPKGSCLAF 197 (706)
T ss_dssp EEEECBCTTSCCCCCEESCSCCBTTEEESSCC---GGGCTTCCCSEEECTTSSEEEE
T ss_pred EEEecCcccccCCCcEEeccCCCCCeEcccch---hhhhcCCCceEEECCCCCEEEE
Confidence 9999998 76554333322211000000 0000000167999999999885
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.69 E-value=3.8e-07 Score=87.14 Aligned_cols=130 Identities=10% Similarity=0.074 Sum_probs=82.7
Q ss_pred eEEEEeeC---CCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCC--CceeeeeeccCceEEEEEeecCCC--C-------
Q psy2085 37 ELIQDFEM---PGVSTSVRISPDGQYVLSTGIYKPRVRCYETDN--LSMKFERCFDSEVVTFEILSDDYS--S------- 102 (358)
Q Consensus 37 eliqdfe~---~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~--lslk~~r~~d~e~v~f~~LS~D~s--~------- 102 (358)
..+..+.+ ......++|||||++|++++..+++|.+|++.. ..+..... ....+..++. .
T Consensus 181 ~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~------~~~~~~~~~~g~~~~~~~~~ 254 (365)
T 1jof_A 181 ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHH------SFPLIPPGIPDRDPETGKGL 254 (365)
T ss_dssp EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE------EEESSCTTCCCBCTTTSSBS
T ss_pred EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccc------eEEcCCCCcCCccccccccc
Confidence 34444543 346889999999999987776678999998763 22211000 0111111111 1
Q ss_pred CeeEEE-EcCCCCEEEEEeCC-C-----eEEEEeCC-CCceeEE---EeCCCCccccccCCCccccccCCCceeeEEcC-
Q psy2085 103 ELNSIA-INPVHQLICVGTIE-G-----KVEAWDPR-MKVKAGT---LDCAFNCISNERDTEEKEGKASSDESSEEEEE- 170 (358)
Q Consensus 103 ~In~i~-~np~~~llasGs~D-G-----tV~iWD~R-s~~~i~~---L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~- 170 (358)
.+..++ |+|+++.|++++.+ + +|.+||+. +++.... +..+.... ..++|+|
T Consensus 255 ~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~-----------------~~~a~sp~ 317 (365)
T 1jof_A 255 YRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGG-----------------HSNAVSPC 317 (365)
T ss_dssp EEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCT-----------------TCCCEEEC
T ss_pred ccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCc-----------------ccceecCC
Confidence 478999 99999977665532 2 89999986 5554321 22222111 6789999
Q ss_pred --CCCEEEEe--c--ceEEEECCCC
Q psy2085 171 --EEEEEESS--D--DDQAWTKEIK 189 (358)
Q Consensus 171 --d~~~llSa--D--~IKIWD~~tG 189 (358)
+|++|+++ + .|+||+.+..
T Consensus 318 ~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 318 PWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CcCCCEEEEEEcCCCeEEEEEEchh
Confidence 89998863 3 9999998754
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.69 E-value=9.4e-08 Score=100.46 Aligned_cols=118 Identities=11% Similarity=0.049 Sum_probs=82.9
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC-
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE- 122 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D- 122 (358)
|.....+++|+|||++|+ ++ +++|++||+.+...... +..... ..+....+.++|||+++.|++++.+
T Consensus 15 ~~~~~~~~~w~~dg~~~~-~~--~~~i~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~~~~Spdg~~l~~~~~~~ 83 (740)
T 4a5s_A 15 YRLKLYSLRWISDHEYLY-KQ--ENNILVFNAEYGNSSVF--LENSTF------DEFGHSINDYSISPDGQFILLEYNYV 83 (740)
T ss_dssp SCCCCCCEEECSSSEEEE-EE--TTEEEEEETTTCCEEEE--ECTTTT------TTCCSCCCEEEECTTSSEEEEEEEEE
T ss_pred ccccccccEECCCCcEEE-Ec--CCcEEEEECCCCceEEE--Eechhh------hhhcccccceEECCCCCEEEEEECCe
Confidence 444567899999998774 44 88999999987542211 100000 0111234568999999999999887
Q ss_pred --------CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCCCc
Q psy2085 123 --------GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEIKK 190 (358)
Q Consensus 123 --------GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~tG~ 190 (358)
|.+.+||+.+++... |..+...+ ...+|||||+.|+. .| .|.+||..+|+
T Consensus 84 ~~~r~~~~~~~~~~d~~~~~~~~-l~~~~~~~-----------------~~~~~SPdG~~la~~~~~~i~~~~~~~~~ 143 (740)
T 4a5s_A 84 KQWRHSYTASYDIYDLNKRQLIT-EERIPNNT-----------------QWVTWSPVGHKLAYVWNNDIYVKIEPNLP 143 (740)
T ss_dssp ECSSSCEEEEEEEEETTTTEECC-SSCCCTTE-----------------EEEEECSSTTCEEEEETTEEEEESSTTSC
T ss_pred eeEEEccceEEEEEECCCCcEEE-cccCCCcc-----------------eeeEECCCCCEEEEEECCeEEEEECCCCc
Confidence 556799999987543 43333333 67999999999885 68 99999998877
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.54 E-value=4.1e-07 Score=93.15 Aligned_cols=115 Identities=9% Similarity=-0.057 Sum_probs=76.4
Q ss_pred CCEeEEEEcCCCCEEEEEEecC---------CeEEEEEcCC------CceeeeeeccCceEEEEEeecCCCCCeeEEEEc
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYK---------PRVRCYETDN------LSMKFERCFDSEVVTFEILSDDYSSELNSIAIN 110 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d---------~~IrvwDl~~------lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~n 110 (358)
..+.+++|||||++|+.++... .+|.+||+.+ ...+ +-.. .+ ...+..++||
T Consensus 130 ~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~l~~----------~~-~~~~~~~~~S 196 (662)
T 3azo_A 130 LRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR--ELSD----------DA-HRFVTGPRLS 196 (662)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE--ESSC----------SC-SSEECCCEEC
T ss_pred ccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee--EEEe----------cC-CCcccCceEC
Confidence 4578999999999987655321 5899999976 3221 1110 11 1356788999
Q ss_pred CCCCEEEEEeCC--------CeEEEEeCC-CC---ceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe
Q psy2085 111 PVHQLICVGTIE--------GKVEAWDPR-MK---VKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS 178 (358)
Q Consensus 111 p~~~llasGs~D--------GtV~iWD~R-s~---~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa 178 (358)
|+++.|++++.+ ..|.+||+. ++ ........+...+ ..+.|+|||+.++++
T Consensus 197 pDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~-----------------~~~~~spdg~l~~~~ 259 (662)
T 3azo_A 197 PDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAI-----------------AQAEWAPDGSLIVAT 259 (662)
T ss_dssp TTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCE-----------------EEEEECTTSCEEEEE
T ss_pred CCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceE-----------------cceEECCCCeEEEEE
Confidence 999999988755 379999998 56 3333333323333 679999999976665
Q ss_pred c-----ceEEEECCCCc
Q psy2085 179 D-----DDQAWTKEIKK 190 (358)
Q Consensus 179 D-----~IKIWD~~tG~ 190 (358)
+ .|.+||..+|+
T Consensus 260 ~~~~~~~l~~~~~~~~~ 276 (662)
T 3azo_A 260 DRTGWWNLHRVDPATGA 276 (662)
T ss_dssp CTTSSCEEEEECTTTCC
T ss_pred CCCCCeEEEEEECCCCc
Confidence 3 45556665665
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.51 E-value=1.1e-06 Score=92.21 Aligned_cols=75 Identities=15% Similarity=0.138 Sum_probs=54.3
Q ss_pred CEeEEEEcCCCCEEEEEEec--------CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEE
Q psy2085 47 VSTSVRISPDGQYVLSTGIY--------KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICV 118 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~--------d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llas 118 (358)
..+.+.|||||++|+.+... .+.+.+||+.+...+. +. .+.+.+..++|||+++.||.
T Consensus 63 ~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~---l~-----------~~~~~~~~~~~SPdG~~la~ 128 (740)
T 4a5s_A 63 SINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT---EE-----------RIPNNTQWVTWSPVGHKLAY 128 (740)
T ss_dssp CCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC---SS-----------CCCTTEEEEEECSSTTCEEE
T ss_pred cccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE---cc-----------cCCCcceeeEECCCCCEEEE
Confidence 34568999999998655431 1567799998754321 10 01146889999999999999
Q ss_pred EeCCCeEEEEeCCCCcee
Q psy2085 119 GTIEGKVEAWDPRMKVKA 136 (358)
Q Consensus 119 Gs~DGtV~iWD~Rs~~~i 136 (358)
++ |+.|.+||+.++...
T Consensus 129 ~~-~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 129 VW-NNDIYVKIEPNLPSY 145 (740)
T ss_dssp EE-TTEEEEESSTTSCCE
T ss_pred EE-CCeEEEEECCCCceE
Confidence 85 689999999888754
No 167
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.50 E-value=8.4e-07 Score=87.76 Aligned_cols=110 Identities=15% Similarity=0.089 Sum_probs=77.9
Q ss_pred EEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEE
Q psy2085 40 QDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVG 119 (358)
Q Consensus 40 qdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasG 119 (358)
...++|. |+.++| ||.+|++ | .++.|++||+.++...-... . +...|+++.+.+. -+|++
T Consensus 83 ~~~~lp~-V~~l~f--d~~~L~v-~-~~~~l~v~dv~sl~~~~~~~---------~----~~~~v~~i~~~~p--~~av~ 142 (388)
T 1xip_A 83 WEKEIPD-VIFVCF--HGDQVLV-S-TRNALYSLDLEELSEFRTVT---------S----FEKPVFQLKNVNN--TLVIL 142 (388)
T ss_dssp EEEECTT-EEEEEE--ETTEEEE-E-ESSEEEEEESSSTTCEEEEE---------E----CSSCEEEEEECSS--EEEEE
T ss_pred EEeeCCC-eeEEEE--CCCEEEE-E-cCCcEEEEEchhhhccCccc---------e----eecceeeEEecCC--CEEEE
Confidence 3446788 999999 9998865 4 67999999998764211100 0 1134666655443 38889
Q ss_pred eCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-ceEEEECCCCc
Q psy2085 120 TIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-DDQAWTKEIKK 190 (358)
Q Consensus 120 s~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-~IKIWD~~tG~ 190 (358)
+.||+|.+||+..++... +. ..+ ++++|||+|..+...| ++++|+..++.
T Consensus 143 ~~dG~L~v~dl~~~~~~~-~~---~~V-----------------s~v~WSpkG~~vg~~dg~i~~~~~~~~~ 193 (388)
T 1xip_A 143 NSVNDLSALDLRTKSTKQ-LA---QNV-----------------TSFDVTNSQLAVLLKDRSFQSFAWRNGE 193 (388)
T ss_dssp ETTSEEEEEETTTCCEEE-EE---ESE-----------------EEEEECSSEEEEEETTSCEEEEEEETTE
T ss_pred ECCCCEEEEEccCCcccc-cc---CCc-----------------eEEEEcCCceEEEEcCCcEEEEcCCCcc
Confidence 999999999999887653 21 223 7899999994344578 99999887765
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.49 E-value=4.7e-06 Score=75.90 Aligned_cols=114 Identities=6% Similarity=0.041 Sum_probs=80.9
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC-e
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG-K 124 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG-t 124 (358)
...+.|+++|+|+ |+++...++.|++||.....+ ... ..+.....+..|+++|++.+++++..++ .
T Consensus 164 ~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~~---~~~---------~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~ 230 (286)
T 1q7f_A 164 EFPNGVVVNDKQE-IFISDNRAHCVKVFNYEGQYL---RQI---------GGEGITNYPIGVGINSNGEILIADNHNNFN 230 (286)
T ss_dssp SSEEEEEECSSSE-EEEEEGGGTEEEEEETTCCEE---EEE---------SCTTTSCSEEEEEECTTCCEEEEECSSSCE
T ss_pred CCcEEEEECCCCC-EEEEECCCCEEEEEcCCCCEE---EEE---------ccCCccCCCcEEEECCCCCEEEEeCCCCEE
Confidence 3578999999998 556666788999999754211 111 0111114678999999999999988886 9
Q ss_pred EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCC
Q psy2085 125 VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEI 188 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~t 188 (358)
|.+||+ +++.+..+..+.... .|..|+|+|+|+.+++ .| +|+||+...
T Consensus 231 i~~~~~-~g~~~~~~~~~~~~~---------------~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 231 LTIFTQ-DGQLISALESKVKHA---------------QCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEECT-TSCEEEEEEESSCCS---------------CEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred EEEECC-CCCEEEEEcccCCCC---------------cceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 999996 566677665432210 1167999999987776 46 999999864
No 169
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.45 E-value=1.8e-06 Score=81.66 Aligned_cols=112 Identities=5% Similarity=-0.058 Sum_probs=77.4
Q ss_pred EEEcCCCCEEEEEEecCC--eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEE
Q psy2085 51 VRISPDGQYVLSTGIYKP--RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAW 128 (358)
Q Consensus 51 v~~SpDG~~LlatG~~d~--~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iW 128 (358)
.+|||||++|+.++..++ +|.+||+.+.... +.+ ......+..++|+|+++.|++++.++.|.+|
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~--~lt-----------~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~ 107 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVAT--QLT-----------EGRGDNTFGGFLSPDDDALFYVKDGRNLMRV 107 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEE--ECC-----------CSSCBCSSSCEECTTSSEEEEEETTTEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceE--Eee-----------eCCCCCccceEEcCCCCEEEEEeCCCeEEEE
Confidence 789999999877665456 5888888764321 111 1111233467899999999999999999999
Q ss_pred eCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE------------------------ec-ceEE
Q psy2085 129 DPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES------------------------SD-DDQA 183 (358)
Q Consensus 129 D~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS------------------------aD-~IKI 183 (358)
|+.+++....+..+...+.. ....++|++..++. .+ .|.+
T Consensus 108 d~~~g~~~~~~~~~~~~~~~---------------~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (388)
T 3pe7_A 108 DLATLEENVVYQVPAEWVGY---------------GTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMR 172 (388)
T ss_dssp ETTTCCEEEEEECCTTEEEE---------------EEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEE
T ss_pred ECCCCcceeeeechhhcccc---------------cceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEE
Confidence 99999876666554332200 11234888888862 23 7899
Q ss_pred EECCCCc
Q psy2085 184 WTKEIKK 190 (358)
Q Consensus 184 WD~~tG~ 190 (358)
||+.+|+
T Consensus 173 ~d~~~g~ 179 (388)
T 3pe7_A 173 VDLKTGE 179 (388)
T ss_dssp EETTTCC
T ss_pred EECCCCc
Confidence 9999987
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.44 E-value=3.7e-06 Score=86.07 Aligned_cols=127 Identities=11% Similarity=-0.010 Sum_probs=80.3
Q ss_pred CCCEeEEEEcCCCCEEEEEEecC-------CeEEEEEcC-CCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEE
Q psy2085 45 PGVSTSVRISPDGQYVLSTGIYK-------PRVRCYETD-NLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLI 116 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~~d-------~~IrvwDl~-~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ll 116 (358)
+..+..++|||||++|+.++... .+|.+||+. +....- ...+...+...+..++|+|+++++
T Consensus 187 ~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~----------~~~l~~~~~~~~~~~~~spdg~l~ 256 (662)
T 3azo_A 187 HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFAD----------TRTLLGGPEEAIAQAEWAPDGSLI 256 (662)
T ss_dssp SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEE----------EEEEEEETTBCEEEEEECTTSCEE
T ss_pred CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccc----------cEEeCCCCCceEcceEECCCCeEE
Confidence 45677899999999987655332 479999998 332110 001111112468899999999988
Q ss_pred EEEeCCC--eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec--ceEEE--ECCCCc
Q psy2085 117 CVGTIEG--KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD--DDQAW--TKEIKK 190 (358)
Q Consensus 117 asGs~DG--tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD--~IKIW--D~~tG~ 190 (358)
++++.+| .|.+||+.+++....+..+.......++++. ..+.|+|++..++++. .++|| |..+|+
T Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 257 VATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGM---------RWFAPLANGLIAVVHGKGAAVLGILDPESGE 327 (662)
T ss_dssp EEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTC---------CSEEECTTSCEEEEEBSSSCEEEEEETTTTE
T ss_pred EEECCCCCeEEEEEECCCCceeecccccccccCccccccC---------ceEeEeCCCEEEEEEEcCccEEEEEECCCCc
Confidence 8888888 6667777676644333322211111111100 5799999999888754 88888 766665
No 171
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.42 E-value=2e-06 Score=89.71 Aligned_cols=113 Identities=7% Similarity=-0.084 Sum_probs=78.5
Q ss_pred CEeEEEEcCCCCEEEEEEecCC----eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKP----RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE 122 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~----~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D 122 (358)
.+..++|||||++|+.+.+..| +|++||+.+...... .+.. ..+..++|+|+++.|+.++.+
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~-----------~~~~---~~~~~~~wspDg~~l~~~~~~ 191 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD-----------VLER---VKFSCMAWTHDGKGMFYNAYP 191 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE-----------EEEE---ECSCCEEECTTSSEEEEEECC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc-----------cccC---cccceEEEEeCCCEEEEEEEC
Confidence 5789999999999876654444 899999987542110 0000 125679999999999999888
Q ss_pred Ce----------------EEEEeCCCCcee--EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--e----
Q psy2085 123 GK----------------VEAWDPRMKVKA--GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--S---- 178 (358)
Q Consensus 123 Gt----------------V~iWD~Rs~~~i--~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--a---- 178 (358)
+. |.+|++.++... -......+... . ..+.|+|||++|+. .
T Consensus 192 ~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~----~-----------~~~~~SpDg~~l~~~~~~~~~ 256 (710)
T 2xdw_A 192 QQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKW----M-----------GGAELSDDGRYVLLSIREGCD 256 (710)
T ss_dssp CCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTC----E-----------EEEEECTTSCEEEEEEECSSS
T ss_pred CccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeE----E-----------EEEEEcCCCCEEEEEEEccCC
Confidence 76 999999887632 22222211100 0 56899999998873 2
Q ss_pred -c-ceEEEECCC
Q psy2085 179 -D-DDQAWTKEI 188 (358)
Q Consensus 179 -D-~IKIWD~~t 188 (358)
+ .|.+||+.+
T Consensus 257 ~~~~l~~~d~~~ 268 (710)
T 2xdw_A 257 PVNRLWYCDLQQ 268 (710)
T ss_dssp SCCEEEEEEGGG
T ss_pred CccEEEEEECcc
Confidence 5 899999986
No 172
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.41 E-value=1.7e-05 Score=73.87 Aligned_cols=151 Identities=9% Similarity=0.027 Sum_probs=90.6
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCC--CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPG--VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~--~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+.+..+++..+..|+...+ +++..|..+. .++++.++|||+.|+ + +++.|.+||. +..+.
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG-------------~~~w~~~~~~~~~~~~~~~~pdG~ilv-s--~~~~V~~~d~-~G~~~ 68 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTK-------------EIVWEYPLEKGWECNSVAATKAGEILF-S--YSKGAKMITR-DGREL 68 (276)
T ss_dssp EEEEECTTCSEEEEEETTTT-------------EEEEEEECCTTCCCCEEEECTTSCEEE-E--CBSEEEEECT-TSCEE
T ss_pred cEEEeeCCCCEEEEEECCCC-------------eEEEEeCCCccCCCcCeEECCCCCEEE-e--CCCCEEEECC-CCCEE
Confidence 46778888888888884334 2445555443 588999999998665 3 4678888887 44333
Q ss_pred eeeecc--CceE-------------------EEEEeecCCC---------------CCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 82 FERCFD--SEVV-------------------TFEILSDDYS---------------SELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 82 ~~r~~d--~e~v-------------------~f~~LS~D~s---------------~~In~i~~np~~~llasGs~DGtV 125 (358)
.+.... .++. ....++++.. .....+++.++++++++.+.+|.|
T Consensus 69 W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v 148 (276)
T 3no2_A 69 WNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEV 148 (276)
T ss_dssp EEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEE
T ss_pred EEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEE
Confidence 222111 0100 0111111111 012233445566666666666666
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec--ceEEEECCCCc
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD--DDQAWTKEIKK 190 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD--~IKIWD~~tG~ 190 (358)
.+||+. ++.+-++..+.. |.++.+.++|+.+++ .+ .|..+|..||+
T Consensus 149 ~~~d~~-G~~~w~~~~~~~------------------~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 149 REIAPN-GQLLNSVKLSGT------------------PFSSAFLDNGDCLVACGDAHCFVQLNLESNR 197 (276)
T ss_dssp EEECTT-SCEEEEEECSSC------------------CCEEEECTTSCEEEECBTTSEEEEECTTTCC
T ss_pred EEECCC-CCEEEEEECCCC------------------ccceeEcCCCCEEEEeCCCCeEEEEeCcCCc
Confidence 666665 666665554322 266788899998886 44 89999999998
No 173
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.35 E-value=5e-06 Score=77.46 Aligned_cols=98 Identities=17% Similarity=0.165 Sum_probs=67.3
Q ss_pred CCEeEEEEcCCCCEEEEEEecC--C--eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYK--P--RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI 121 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d--~--~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~ 121 (358)
..+.+++|||||++|+.++... + +|.+||+.+.... + +.... . +.+++|+|+++.|++++.
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~--~----------l~~~~--~-~~~~~wspdg~~l~~~~~ 123 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSK--K----------ILEAK--N-IRSLEWNEDSRKLLIVGF 123 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEE--E----------EEEES--E-EEEEEECTTSSEEEEEEE
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceE--E----------EEcCC--C-ccceeECCCCCEEEEEEc
Confidence 3578899999999987665432 3 4777787653221 0 01111 2 789999999998888764
Q ss_pred C---------------------------CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCE
Q psy2085 122 E---------------------------GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEE 174 (358)
Q Consensus 122 D---------------------------GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ 174 (358)
+ ..|.+||+.+++.+..+... .+ ..+.|+|+| .
T Consensus 124 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~--~~-----------------~~~~~spdg-~ 183 (347)
T 2gop_A 124 KRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP--RF-----------------SSGIWHRDK-I 183 (347)
T ss_dssp CCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEE--TT-----------------CEEEEETTE-E
T ss_pred cCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC--Cc-----------------ccccCCCCe-E
Confidence 2 57999999988764555442 22 678999999 7
Q ss_pred EEEe
Q psy2085 175 EESS 178 (358)
Q Consensus 175 llSa 178 (358)
++++
T Consensus 184 ~~~~ 187 (347)
T 2gop_A 184 VVNV 187 (347)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7664
No 174
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.29 E-value=1.9e-05 Score=81.45 Aligned_cols=140 Identities=11% Similarity=-0.022 Sum_probs=90.8
Q ss_pred EEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEc----CCC
Q psy2085 38 LIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAIN----PVH 113 (358)
Q Consensus 38 liqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~n----p~~ 113 (358)
++..+........+.|||||++|++++ .++.|.+||+...+.+...... .. .....++|+ |++
T Consensus 189 v~~~i~~g~~p~~v~~SpDGr~lyv~~-~dg~V~viD~~~~t~~~v~~i~----------~G--~~P~~ia~s~~~~pDG 255 (567)
T 1qks_A 189 IKTVLDTGYAVHISRLSASGRYLFVIG-RDGKVNMIDLWMKEPTTVAEIK----------IG--SEARSIETSKMEGWED 255 (567)
T ss_dssp EEEEEECSSCEEEEEECTTSCEEEEEE-TTSEEEEEETTSSSCCEEEEEE----------CC--SEEEEEEECCSTTCTT
T ss_pred EEEEEeCCCCccceEECCCCCEEEEEc-CCCeEEEEECCCCCCcEeEEEe----------cC--CCCceeEEccccCCCC
Confidence 455555555678999999999998764 6889999999521222211111 00 235789999 699
Q ss_pred CEEEEEeC-CCeEEEEeCCCCceeEEEeCCCCc-----------ccc-ccCCCc------cc--cc--------------
Q psy2085 114 QLICVGTI-EGKVEAWDPRMKVKAGTLDCAFNC-----------ISN-ERDTEE------KE--GK-------------- 158 (358)
Q Consensus 114 ~llasGs~-DGtV~iWD~Rs~~~i~~L~~~~~~-----------v~~-~~~i~g------l~--Gt-------------- 158 (358)
+++.+++. +++|.++|..+.+.+.++...... +.. ..+.++ +. |+
T Consensus 256 k~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v 335 (567)
T 1qks_A 256 KYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKT 335 (567)
T ss_dssp TEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEE
T ss_pred CEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcccee
Confidence 87666654 699999999999998887643210 000 001100 00 11
Q ss_pred ----cCCCceeeEEcCCCCEEEEe---c-ceEEEECCCCc
Q psy2085 159 ----ASSDESSEEEEEEEEEEESS---D-DDQAWTKEIKK 190 (358)
Q Consensus 159 ----Rs~~P~sI~fs~d~~~llSa---D-~IKIWD~~tG~ 190 (358)
....|..+.|+|+|++++.+ + .|.++|..+++
T Consensus 336 ~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k 375 (567)
T 1qks_A 336 TEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK 375 (567)
T ss_dssp EEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred eeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 01123678999999998753 3 99999999998
No 175
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.29 E-value=3.5e-05 Score=72.79 Aligned_cols=112 Identities=10% Similarity=0.052 Sum_probs=81.4
Q ss_pred CEeEEEEcCCCCEEEEEEe-cCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC---
Q psy2085 47 VSTSVRISPDGQYVLSTGI-YKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE--- 122 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~-~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D--- 122 (358)
....+++ ++..|+++.. .+++|.+||+.+..+. .... . . ...+.++++|++.+++++..+
T Consensus 132 ~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~--~~i~--------~--g--~~p~~i~~~~dG~l~v~~~~~~~~ 195 (328)
T 3dsm_A 132 STEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVV--DELT--------I--G--IQPTSLVMDKYNKMWTITDGGYEG 195 (328)
T ss_dssp BCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEE--EEEE--------C--S--SCBCCCEECTTSEEEEEBCCBCTT
T ss_pred CcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEE--EEEE--------c--C--CCccceEEcCCCCEEEEECCCccC
Confidence 4456677 4556766654 4789999999875432 1110 0 0 245788999999988776655
Q ss_pred -------CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-ceEEEECCCCc
Q psy2085 123 -------GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-DDQAWTKEIKK 190 (358)
Q Consensus 123 -------GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-~IKIWD~~tG~ 190 (358)
+.|.+||+.+++.+..+..+... .|..|+|+|+++.|+.++ .|.+||..+++
T Consensus 196 ~~~~~~~~~v~~id~~t~~v~~~~~~~~g~----------------~p~~la~~~d~~~lyv~~~~v~~~d~~t~~ 255 (328)
T 3dsm_A 196 SPYGYEAPSLYRIDAETFTVEKQFKFKLGD----------------WPSEVQLNGTRDTLYWINNDIWRMPVEADR 255 (328)
T ss_dssp CSSCBCCCEEEEEETTTTEEEEEEECCTTC----------------CCEEEEECTTSCEEEEESSSEEEEETTCSS
T ss_pred CccccCCceEEEEECCCCeEEEEEecCCCC----------------CceeEEEecCCCEEEEEccEEEEEECCCCc
Confidence 89999999999888777653211 117899999999999999 99999999876
No 176
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.27 E-value=5.4e-06 Score=86.40 Aligned_cols=113 Identities=7% Similarity=-0.120 Sum_probs=76.4
Q ss_pred CCEeEEEEcCCCCEEEEEE----ecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCe--eEEEEcCCCCEEEEE
Q psy2085 46 GVSTSVRISPDGQYVLSTG----IYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSEL--NSIAINPVHQLICVG 119 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG----~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~I--n~i~~np~~~llasG 119 (358)
..+..++|||||++|+.+. +...+|++||+.+.......+. ..+ ..++|+|+++.|+.+
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~---------------~~~~~~~~~wspDg~~l~~~ 185 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVI---------------EGGKYATPKWTPDSKGFYYE 185 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCB---------------SCCTTCCCEECTTSSEEEEE
T ss_pred EEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCccc---------------CcccccceEEecCCCEEEEE
Confidence 3588999999999986543 3346899999987543100011 122 678999999999999
Q ss_pred eCCCe-------------EEEEeCCCCcee--EEEeCCCC--ccccccCCCccccccCCCceeeEEcCCCCEEEE-e-c-
Q psy2085 120 TIEGK-------------VEAWDPRMKVKA--GTLDCAFN--CISNERDTEEKEGKASSDESSEEEEEEEEEEES-S-D- 179 (358)
Q Consensus 120 s~DGt-------------V~iWD~Rs~~~i--~~L~~~~~--~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a-D- 179 (358)
+.|++ |.+|++.++..- -......+ .+ ..+.|||||++|+. + +
T Consensus 186 ~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~-----------------~~~~~SpDG~~l~~~~~~~ 248 (695)
T 2bkl_A 186 WLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTF-----------------LQSDLSRDGKYLFVYILRG 248 (695)
T ss_dssp ECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCE-----------------EEEEECTTSCCEEEEEEET
T ss_pred EecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEE-----------------EEEEECCCCCEEEEEEeCC
Confidence 98877 999999887632 22222211 12 56889999988773 2 1
Q ss_pred ----ceEEEECCCCc
Q psy2085 180 ----DDQAWTKEIKK 190 (358)
Q Consensus 180 ----~IKIWD~~tG~ 190 (358)
.|.+||..+|+
T Consensus 249 ~~~~~l~~~~~~~~~ 263 (695)
T 2bkl_A 249 WSENDVYWKRPGEKD 263 (695)
T ss_dssp TTEEEEEEECTTCSS
T ss_pred CCceEEEEEcCCCCc
Confidence 56666665544
No 177
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.21 E-value=1.2e-05 Score=75.80 Aligned_cols=115 Identities=10% Similarity=0.007 Sum_probs=77.3
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC------CCCEEEEEeC
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP------VHQLICVGTI 121 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np------~~~llasGs~ 121 (358)
...|+++|++..|+++....++|++||..+..+ .+.. ..+.....+.+++++| ++.++++.+.
T Consensus 198 p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~--~~~~---------~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~ 266 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADRENGRIQCFKTDTKEF--VREI---------KHASFGRNVFAISYIPGFLFAVNGKPYFGDQE 266 (329)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCE--EEEE---------CCTTTTTCEEEEEEETTEEEEEECCCCTTCSC
T ss_pred CcEEEEECCCCEEEEEECCCCEEEEEECCCCcE--EEEE---------eccccCCCcceeeecCCEEEEeCCCEEeccCC
Confidence 689999999556777877889999999874332 1111 1112225678888998 3333333344
Q ss_pred CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECC
Q psy2085 122 EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKE 187 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~ 187 (358)
+++|.+||+.+++.+.++...... ...|..|+|+|+|..+++ .+ .|++|++.
T Consensus 267 ~~~v~~~~~~~g~~~~~~~~~~~~--------------~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 267 PVQGFVMNFSSGEIIDVFKPVRKH--------------FDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp CCCEEEEETTTCCEEEEECCSSSC--------------CSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred CcEEEEEEcCCCeEEEEEcCCCCc--------------cCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 569999999999988887421111 011278999999965555 34 99999975
No 178
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.21 E-value=5.5e-05 Score=71.12 Aligned_cols=130 Identities=9% Similarity=0.019 Sum_probs=81.8
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc--eeeeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEe-CC
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS--MKFERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGT-IE 122 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls--lk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs-~D 122 (358)
....|+++|+|+ |+++...+++|++||..... +.......... ..+..-...+.|+++| ++.++++.+ .+
T Consensus 92 ~p~gia~d~~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g-----~~~~~~~~P~~ia~~~~~g~lyv~d~~~~ 165 (329)
T 3fvz_A 92 LPHGLSIDTDGN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPG-----SDQNHFCQPTDVAVEPSTGAVFVSDGYCN 165 (329)
T ss_dssp SEEEEEECTTSC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCC-----CSTTCCSSEEEEEECTTTCCEEEEECSSC
T ss_pred CceEEEECCCCC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCC-----CCccccCCCcEEEEeCCCCeEEEEeCCCC
Confidence 578999999999 55677778899999986431 11000000000 0011114688999999 789999987 79
Q ss_pred CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe---c-ceEEEECCCCc
Q psy2085 123 GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS---D-DDQAWTKEIKK 190 (358)
Q Consensus 123 GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa---D-~IKIWD~~tG~ 190 (358)
+.|.+|| .++..+..+.......... . .....|..|+|+|++..|+.+ + .|++||..+|+
T Consensus 166 ~~I~~~~-~~g~~~~~~~~~g~~~~~~--~-----~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~ 229 (329)
T 3fvz_A 166 SRIVQFS-PSGKFVTQWGEESSGSSPR--P-----GQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE 229 (329)
T ss_dssp CEEEEEC-TTSCEEEEECEECCSSSCC--T-----TEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC
T ss_pred CeEEEEc-CCCCEEEEeccCCCCCCCC--C-----cccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc
Confidence 9999999 5677666664221110000 0 001123889999995445433 3 99999999887
No 179
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.20 E-value=6.3e-05 Score=68.94 Aligned_cols=112 Identities=7% Similarity=-0.012 Sum_probs=77.9
Q ss_pred CCCEeEEEEcCCCCEEEEEEecCCeEEEEEcC-CCce-eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC
Q psy2085 45 PGVSTSVRISPDGQYVLSTGIYKPRVRCYETD-NLSM-KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE 122 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~-~lsl-k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D 122 (358)
....+.++|+|||+.| ++.+.+++|.+||+. +..+ ...+ .+ ......+..|++.++++++++. +
T Consensus 171 ~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~----------~~-~~~~~~p~~i~~d~~G~l~v~~--~ 236 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGV----------HF-TVEPGKTDGLRVDAGGLIWASA--G 236 (296)
T ss_dssp CSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEE----------EE-CCSSSCCCSEEEBTTSCEEEEE--T
T ss_pred CCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCe----------Ee-eCCCCCCCeEEECCCCCEEEEc--C
Confidence 3456899999999988 777778899999986 3222 1111 11 1111456789999999988776 8
Q ss_pred CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEE-cCCCCEEEE-ec-ceEEEECCCC
Q psy2085 123 GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEE-EEEEEEEES-SD-DDQAWTKEIK 189 (358)
Q Consensus 123 GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~f-s~d~~~llS-aD-~IKIWD~~tG 189 (358)
+.|.+||+. ++.+..+..+.. + .++.| +|+++.|+. +. .+--++..++
T Consensus 237 ~~v~~~~~~-g~~~~~~~~~~~-~-----------------~~~~f~~~d~~~L~v~t~~~l~~~~~~~~ 287 (296)
T 3e5z_A 237 DGVHVLTPD-GDELGRVLTPQT-T-----------------SNLCFGGPEGRTLYMTVSTEFWSIETNVR 287 (296)
T ss_dssp TEEEEECTT-SCEEEEEECSSC-C-----------------CEEEEESTTSCEEEEEETTEEEEEECSCC
T ss_pred CeEEEECCC-CCEEEEEECCCC-c-----------------eeEEEECCCCCEEEEEcCCeEEEEEcccc
Confidence 999999996 777788876654 3 77899 588887764 33 4434455443
No 180
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.18 E-value=6e-05 Score=68.46 Aligned_cols=115 Identities=9% Similarity=0.045 Sum_probs=80.1
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
...++++++|+|+ |+++...++.|.+||...... +.. -.......++.|+++|++.++++.+.++.|
T Consensus 121 ~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~~---~~~---------~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i 187 (286)
T 1q7f_A 121 QHPRGVTVDNKGR-IIVVECKVMRVIIFDQNGNVL---HKF---------GCSKHLEFPNGVVVNDKQEIFISDNRAHCV 187 (286)
T ss_dssp SCEEEEEECTTSC-EEEEETTTTEEEEECTTSCEE---EEE---------ECTTTCSSEEEEEECSSSEEEEEEGGGTEE
T ss_pred CCceEEEEeCCCC-EEEEECCCCEEEEEcCCCCEE---EEe---------CCCCccCCcEEEEECCCCCEEEEECCCCEE
Confidence 3578999999998 445666678999999653211 110 001111468999999999999998889999
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c--ceEEEECCCCc
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D--DDQAWTKEIKK 190 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D--~IKIWD~~tG~ 190 (358)
.+||+ ++..+..+..+... ..|..|+++++|..+++. + .|.+||.. |+
T Consensus 188 ~~~~~-~g~~~~~~~~~g~~---------------~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~ 239 (286)
T 1q7f_A 188 KVFNY-EGQYLRQIGGEGIT---------------NYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQ 239 (286)
T ss_dssp EEEET-TCCEEEEESCTTTS---------------CSEEEEEECTTCCEEEEECSSSCEEEEECTT-SC
T ss_pred EEEcC-CCCEEEEEccCCcc---------------CCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CC
Confidence 99997 45566666432110 012789999999887763 3 79999964 55
No 181
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.18 E-value=5.9e-06 Score=78.04 Aligned_cols=121 Identities=8% Similarity=-0.041 Sum_probs=74.5
Q ss_pred eCCCCEeEEEEcC-CCCEEEEEEec-----CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC-CCeeEEEEcCCCCE
Q psy2085 43 EMPGVSTSVRISP-DGQYVLSTGIY-----KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS-SELNSIAINPVHQL 115 (358)
Q Consensus 43 e~~~~v~~v~~Sp-DG~~LlatG~~-----d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s-~~In~i~~np~~~l 115 (358)
..+..+..++||| ||++|+.+... ...|.++|+.....+.. . .... ..+..++|+|+++.
T Consensus 185 ~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l--~-----------~~~~~~~~~~~~~spdg~~ 251 (388)
T 3pe7_A 185 QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKV--K-----------THAEGESCTHEFWVPDGSA 251 (388)
T ss_dssp EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEES--C-----------CCCTTEEEEEEEECTTSSC
T ss_pred cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEe--e-----------eCCCCcccccceECCCCCE
Confidence 3456689999999 99988665432 23677778764322111 0 0000 13677899999997
Q ss_pred EEEEeC-C----CeEEEEeCCCCcee--EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-----------
Q psy2085 116 ICVGTI-E----GKVEAWDPRMKVKA--GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES----------- 177 (358)
Q Consensus 116 lasGs~-D----GtV~iWD~Rs~~~i--~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS----------- 177 (358)
|+..+. + +.|.+||+.+++.. ..+..+.... ... ..+.|+|||+.|+.
T Consensus 252 l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~---~~~-----------~~~~~spdg~~l~~~~~~~~~~~~~ 317 (388)
T 3pe7_A 252 LVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLM---SNY-----------DGSLMVGDGSDAPVDVQDDSGYKIE 317 (388)
T ss_dssp EEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEE---ECT-----------TSSEEEEEECCC------------C
T ss_pred EEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeee---ecC-----------CCCeEccCCCcceeEeeeccccccC
Confidence 665443 2 24999999998743 3333211100 001 33689999998772
Q ss_pred ec-ceEEEECCCCc
Q psy2085 178 SD-DDQAWTKEIKK 190 (358)
Q Consensus 178 aD-~IKIWD~~tG~ 190 (358)
.+ .|.+||+.+|+
T Consensus 318 ~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 318 NDPFLYVFNMKNGT 331 (388)
T ss_dssp CCCEEEEEETTTTE
T ss_pred CCCEEEEEeccCCc
Confidence 24 89999999887
No 182
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.18 E-value=4.4e-05 Score=72.09 Aligned_cols=121 Identities=9% Similarity=-0.033 Sum_probs=83.8
Q ss_pred EEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecC--CCCCeeEEEEcCCCCEEE
Q psy2085 40 QDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDD--YSSELNSIAINPVHQLIC 117 (358)
Q Consensus 40 qdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D--~s~~In~i~~np~~~lla 117 (358)
..+........++++||| .|.++..+++.|.+||+.+..+. +.. .+... .......+++ ..+.+++
T Consensus 78 ~~i~~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~--~~i--------~~g~~~~~~~~p~~i~~-~~~~lyv 145 (328)
T 3dsm_A 78 GRITGFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEIT--GYI--------ECPDMDMESGSTEQMVQ-YGKYVYV 145 (328)
T ss_dssp EEEECCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEE--EEE--------ECTTCCTTTCBCCCEEE-ETTEEEE
T ss_pred EEcCCCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEE--EEE--------EcCCccccCCCcceEEE-ECCEEEE
Confidence 333434567899999999 57676668899999999875432 111 01000 0013456777 4555666
Q ss_pred EEe-CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-------------ceEE
Q psy2085 118 VGT-IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-------------DDQA 183 (358)
Q Consensus 118 sGs-~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-------------~IKI 183 (358)
+.. .+++|.+||+.+++.+.++.....+ ..|.++|+|+.++++. .|.+
T Consensus 146 ~~~~~~~~v~viD~~t~~~~~~i~~g~~p------------------~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~ 207 (328)
T 3dsm_A 146 NCWSYQNRILKIDTETDKVVDELTIGIQP------------------TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYR 207 (328)
T ss_dssp EECTTCCEEEEEETTTTEEEEEEECSSCB------------------CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEE
T ss_pred EcCCCCCEEEEEECCCCeEEEEEEcCCCc------------------cceEEcCCCCEEEEECCCccCCccccCCceEEE
Confidence 654 4899999999999988888765443 6789999998777632 4899
Q ss_pred EECCCCc
Q psy2085 184 WTKEIKK 190 (358)
Q Consensus 184 WD~~tG~ 190 (358)
||..+++
T Consensus 208 id~~t~~ 214 (328)
T 3dsm_A 208 IDAETFT 214 (328)
T ss_dssp EETTTTE
T ss_pred EECCCCe
Confidence 9999887
No 183
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.16 E-value=0.00013 Score=67.66 Aligned_cols=105 Identities=9% Similarity=-0.031 Sum_probs=73.6
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC-
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE- 122 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D- 122 (358)
......+++|+|||+ |+++++.++.|.+||..+...... . ... ...+.+++++|++.+++++..+
T Consensus 43 ~~~~~~~~~~~~~g~-l~~~~~~~~~i~~~d~~~~~~~~~----------~-~~~--~~~~~~i~~~~dg~l~v~~~~~~ 108 (333)
T 2dg1_A 43 KGLQLEGLNFDRQGQ-LFLLDVFEGNIFKINPETKEIKRP----------F-VSH--KANPAAIKIHKDGRLFVCYLGDF 108 (333)
T ss_dssp SCCCEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEE----------E-ECS--SSSEEEEEECTTSCEEEEECTTS
T ss_pred cCccccCcEECCCCC-EEEEECCCCEEEEEeCCCCcEEEE----------e-eCC--CCCcceEEECCCCcEEEEeCCCC
Confidence 344578999999998 556777889999999876432210 0 011 1568999999999999887777
Q ss_pred ---CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 123 ---GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 123 ---GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
+.|.+||+.++.....+...... ..|..|.|+|+|..+++
T Consensus 109 ~~~~~i~~~d~~~~~~~~~~~~~~~~---------------~~~~~i~~d~~g~l~v~ 151 (333)
T 2dg1_A 109 KSTGGIFAATENGDNLQDIIEDLSTA---------------YCIDDMVFDSKGGFYFT 151 (333)
T ss_dssp SSCCEEEEECTTSCSCEEEECSSSSC---------------CCEEEEEECTTSCEEEE
T ss_pred CCCceEEEEeCCCCEEEEEEccCccC---------------CcccceEECCCCCEEEE
Confidence 79999999887654344311110 01178999999988776
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.14 E-value=2.5e-05 Score=73.49 Aligned_cols=116 Identities=9% Similarity=-0.081 Sum_probs=76.1
Q ss_pred eCCCCEeEEEEcC-CCCEEEEEEecC-----CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEE
Q psy2085 43 EMPGVSTSVRISP-DGQYVLSTGIYK-----PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLI 116 (358)
Q Consensus 43 e~~~~v~~v~~Sp-DG~~LlatG~~d-----~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ll 116 (358)
..+..+..+.||| ||+.|+.++... .+|.+||+.....+. ..... + ...+..++|+|+++.|
T Consensus 185 ~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~--l~~~~--------~--~~~~~~~~~spdg~~l 252 (396)
T 3c5m_A 185 QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK--IKEHA--------E--GESCTHEFWIPDGSAM 252 (396)
T ss_dssp EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE--SSCCC--------T--TEEEEEEEECTTSSCE
T ss_pred cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE--eeccC--------C--CccccceEECCCCCEE
Confidence 3456688999999 898776544211 368888876432211 00000 0 0247789999999977
Q ss_pred EEEeCC-----CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcC-CCCEEEE-------------
Q psy2085 117 CVGTIE-----GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEE-EEEEEES------------- 177 (358)
Q Consensus 117 asGs~D-----GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~-d~~~llS------------- 177 (358)
++++.+ +.|.+||+.+++.......+ .. . +.|+| +|+.|++
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--~~-----------------~-~~~s~~dg~~l~~~~~~~p~~~~~~~ 312 (396)
T 3c5m_A 253 AYVSYFKGQTDRVIYKANPETLENEEVMVMP--PC-----------------S-HLMSNFDGSLMVGDGCDAPVDVADAD 312 (396)
T ss_dssp EEEEEETTTCCEEEEEECTTTCCEEEEEECC--SE-----------------E-EEEECSSSSEEEEEECCC--------
T ss_pred EEEecCCCCccceEEEEECCCCCeEEeeeCC--CC-----------------C-CCccCCCCceEEEecCCcceeecccc
Confidence 776554 55999999988754332221 11 3 78999 9998875
Q ss_pred -----ec-ceEEEECCCCc
Q psy2085 178 -----SD-DDQAWTKEIKK 190 (358)
Q Consensus 178 -----aD-~IKIWD~~tG~ 190 (358)
.+ .|.+||..+|+
T Consensus 313 ~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 313 SYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp --CCCCCCEEEEEETTTTB
T ss_pred ccccCCCCcEEEEecccCc
Confidence 24 89999998886
No 185
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.13 E-value=2.4e-05 Score=72.74 Aligned_cols=107 Identities=14% Similarity=0.055 Sum_probs=76.4
Q ss_pred CCEeEEEEcCCCCEEEEEE--------ecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEE
Q psy2085 46 GVSTSVRISPDGQYVLSTG--------IYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLIC 117 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG--------~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~lla 117 (358)
..+..+++ ||++|+.+. .+...|.+||+.+.... . + ..+.+++|+|+++.||
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~---~----------l-----~~~~~~~~SpDg~~la 74 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR---F----------I-----ENATMPRISPDGKKIA 74 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE---E----------E-----ESCEEEEECTTSSEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE---E----------c-----ccCCCeEECCCCCEEE
Confidence 34677788 999987542 24667999998764321 1 1 2478899999999988
Q ss_pred EEeCC---Ce--EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e-------------
Q psy2085 118 VGTIE---GK--VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S------------- 178 (358)
Q Consensus 118 sGs~D---Gt--V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a------------- 178 (358)
+++.+ +. |.+||+.+++.......+. + ..+.|+|+|+.|+. +
T Consensus 75 ~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~--~-----------------~~~~wspdg~~l~~~~~~~~~~~~~~~~~ 135 (347)
T 2gop_A 75 FMRANEEKKVSEIWVADLETLSSKKILEAKN--I-----------------RSLEWNEDSRKLLIVGFKRREDEDFIFED 135 (347)
T ss_dssp EEEEETTTTEEEEEEEETTTTEEEEEEEESE--E-----------------EEEEECTTSSEEEEEEECCCC--------
T ss_pred EEEeccCCCcceEEEEECCCCceEEEEcCCC--c-----------------cceeECCCCCEEEEEEccCCCcCCcEEEc
Confidence 87754 34 7778988877655444332 3 67999999998874 2
Q ss_pred ---------------c-ceEEEECCCCcE
Q psy2085 179 ---------------D-DDQAWTKEIKKT 191 (358)
Q Consensus 179 ---------------D-~IKIWD~~tG~~ 191 (358)
. .|.+||+.+|+.
T Consensus 136 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 136 DVPAWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp -CCCC---------CEEEEEEEETTTTEE
T ss_pred ccceeecCcccccCccceEEEEECCCCeE
Confidence 4 789999998874
No 186
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.12 E-value=2.5e-05 Score=75.08 Aligned_cols=89 Identities=11% Similarity=0.012 Sum_probs=66.9
Q ss_pred EEEcCCCCEEEEEEe----------cCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe
Q psy2085 51 VRISPDGQYVLSTGI----------YKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT 120 (358)
Q Consensus 51 v~~SpDG~~LlatG~----------~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs 120 (358)
++|+|||++++++.. ...+|.+||+.+... .+.+ .-. . +.+|+|+|++++|++++
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~--v~~i----------~~~--~-p~~ia~spdg~~l~v~n 323 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR--VARI----------PGR--D-ALSMTIDQQRNLMLTLD 323 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE--EEEE----------ECT--T-CCEEEEETTTTEEEEEC
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcE--EEEE----------ecC--C-eeEEEECCCCCEEEEeC
Confidence 789999998887654 134899999987532 1111 111 3 78999999999888888
Q ss_pred CCCeEEEEeCCCC--ceeEEEe-CCCCccccccCCCccccccCCCceeeEEcCCCC
Q psy2085 121 IEGKVEAWDPRMK--VKAGTLD-CAFNCISNERDTEEKEGKASSDESSEEEEEEEE 173 (358)
Q Consensus 121 ~DGtV~iWD~Rs~--~~i~~L~-~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~ 173 (358)
. ++|.+||+.++ +.++++. ....+ ..+.|+|+|+
T Consensus 324 ~-~~v~v~D~~t~~l~~~~~i~~~G~~P------------------~~~~~~p~G~ 360 (361)
T 2oiz_A 324 G-GNVNVYDISQPEPKLLRTIEGAAEAS------------------LQVQFHPVGG 360 (361)
T ss_dssp S-SCEEEEECSSSSCEEEEEETTSCSSE------------------EEEEECCCSC
T ss_pred C-CeEEEEECCCCcceeeEEeccCCCCc------------------EEEEecCCCC
Confidence 7 99999999999 9999984 33333 6788999885
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.11 E-value=6.6e-05 Score=68.79 Aligned_cols=113 Identities=12% Similarity=-0.029 Sum_probs=78.3
Q ss_pred ceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC
Q psy2085 35 RIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ 114 (358)
Q Consensus 35 rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ 114 (358)
+++.+.. ......++.|+|+|+.|+.+++.++.|.+||..+. ... . ..+ ...+++++++|++.
T Consensus 19 ~~~~l~~--~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~---~---------~~~--~~~~~~l~~~~dg~ 81 (296)
T 3e5z_A 19 EARRLAD--GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSP---E---------MHP--SHHQNGHCLNKQGH 81 (296)
T ss_dssp CCEEEEC--CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEE---E---------ESS--CSSEEEEEECTTCC
T ss_pred cEEEEec--CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEE---E---------ECC--CCCcceeeECCCCc
Confidence 4455542 23346799999999977778888999999998764 211 1 001 14689999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 115 LICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 115 llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
++++.+.++.|.+||+.+++....+....... ...|+.|.++|+|+.++|
T Consensus 82 l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~-------------~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 82 LIACSHGLRRLERQREPGGEWESIADSFEGKK-------------LNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp EEEEETTTTEEEEECSTTCCEEEEECEETTEE-------------CCCCCCEEECTTSCEEEE
T ss_pred EEEEecCCCeEEEEcCCCCcEEEEeeccCCCC-------------CCCCCCEEECCCCCEEEE
Confidence 99988888999999998887543332111100 011267999999998886
No 188
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.09 E-value=9.3e-05 Score=69.48 Aligned_cols=120 Identities=9% Similarity=-0.017 Sum_probs=70.6
Q ss_pred CEeEEEEcCCCCEEEEEEecC----CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEe-
Q psy2085 47 VSTSVRISPDGQYVLSTGIYK----PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGT- 120 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d----~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs- 120 (358)
.+..+.|||||++|+.++..+ +.|.+||+.+...+.... + ..++ +.|+| ++.++++++
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~----------~-----~~~~-~~~s~~dg~~l~~~~~ 302 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV----------M-----PPCS-HLMSNFDGSLMVGDGC 302 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE----------C-----CSEE-EEEECSSSSEEEEEEC
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee----------C-----CCCC-CCccCCCCceEEEecC
Confidence 477899999999886654322 349999997643221110 0 2344 88999 999888765
Q ss_pred ---------------CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e--c-ce
Q psy2085 121 ---------------IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S--D-DD 181 (358)
Q Consensus 121 ---------------~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a--D-~I 181 (358)
.++.|.+||+.+++.. .|..+...+.. +.. .+...+..+.|+|+|+.|+. + + ..
T Consensus 303 ~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~-~~~-----~~~~~~~~~~~s~dg~~l~~~s~~~~~~ 375 (396)
T 3c5m_A 303 DAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDV-LDG-----DRQITHPHPSFTPNDDGVLFTSDFEGVP 375 (396)
T ss_dssp CC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCC-BTT-----BSSTTCCCCEECTTSSEEEEEECTTSSC
T ss_pred CcceeeccccccccCCCCcEEEEecccCceE-EccCCCCcccc-ccc-----cccCCCCCceEccCCCeEEEEecCCCCc
Confidence 3478999999887643 34333221000 000 00000056799999998874 3 2 55
Q ss_pred EEE--ECCCC
Q psy2085 182 QAW--TKEIK 189 (358)
Q Consensus 182 KIW--D~~tG 189 (358)
.|| |+.++
T Consensus 376 ~l~~~~~~~~ 385 (396)
T 3c5m_A 376 AIYIADVPES 385 (396)
T ss_dssp EEEEEECCTT
T ss_pred eEEEEEEccc
Confidence 555 44443
No 189
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.05 E-value=0.00017 Score=65.77 Aligned_cols=117 Identities=6% Similarity=0.102 Sum_probs=82.6
Q ss_pred CEeEEEEc----CCCCEEEEEEecCCeEEEEEcC-CCceeeeeeccCceEEEEEeecCCC-CCeeEEEEcCCCCEEEEEe
Q psy2085 47 VSTSVRIS----PDGQYVLSTGIYKPRVRCYETD-NLSMKFERCFDSEVVTFEILSDDYS-SELNSIAINPVHQLICVGT 120 (358)
Q Consensus 47 ~v~~v~~S----pDG~~LlatG~~d~~IrvwDl~-~lslk~~r~~d~e~v~f~~LS~D~s-~~In~i~~np~~~llasGs 120 (358)
..+.++++ |||++|+++...++.|.+||+. +..+.... .+..+ +... ..+..+++++++.++++..
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~-------~~~~~-~~~~~~~p~~i~~d~~G~l~v~~~ 244 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKK-------VWGHI-PGTHEGGADGMDFDEDNNLLVANW 244 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEE-------EEEEC-CCCSSCEEEEEEEBTTCCEEEEEE
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccce-------EEEEC-CCCCCCCCCceEECCCCCEEEEEc
Confidence 45889999 9998887777677899999976 22211000 01111 1111 3478899999999999888
Q ss_pred CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-E-e-c-ceEEEECCC
Q psy2085 121 IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-S-S-D-DDQAWTKEI 188 (358)
Q Consensus 121 ~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-S-a-D-~IKIWD~~t 188 (358)
.++.|.+||+.+++.+..+..+...+ .+++|+++++.|+ + . + .|..||...
T Consensus 245 ~~~~i~~~d~~~g~~~~~~~~~~~~~-----------------~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 245 GSSHIEVFGPDGGQPKMRIRCPFEKP-----------------SNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TTTEEEEECTTCBSCSEEEECSSSCE-----------------EEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCEEEEEcCCCCcEeEEEeCCCCCc-----------------eeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 89999999998888777776553332 7899999999554 4 2 3 888888864
No 190
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.05 E-value=0.00027 Score=65.39 Aligned_cols=115 Identities=7% Similarity=0.009 Sum_probs=75.0
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecC----CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEE
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYK----PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVG 119 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d----~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasG 119 (358)
.+..+.+++++|||+.+++ +..+ +.|.+||..+..... ... .......+++++++|++.++++.
T Consensus 85 ~~~~~~~i~~~~dg~l~v~-~~~~~~~~~~i~~~d~~~~~~~~--~~~---------~~~~~~~~~~i~~d~~g~l~v~~ 152 (333)
T 2dg1_A 85 HKANPAAIKIHKDGRLFVC-YLGDFKSTGGIFAATENGDNLQD--IIE---------DLSTAYCIDDMVFDSKGGFYFTD 152 (333)
T ss_dssp SSSSEEEEEECTTSCEEEE-ECTTSSSCCEEEEECTTSCSCEE--EEC---------SSSSCCCEEEEEECTTSCEEEEE
T ss_pred CCCCcceEEECCCCcEEEE-eCCCCCCCceEEEEeCCCCEEEE--EEc---------cCccCCcccceEECCCCCEEEEe
Confidence 4567999999999986544 3334 589999987643321 000 00011468999999999988876
Q ss_pred eC------CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-Ee--c-ceEEEECCC
Q psy2085 120 TI------EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-SS--D-DDQAWTKEI 188 (358)
Q Consensus 120 s~------DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-Sa--D-~IKIWD~~t 188 (358)
.. .+.|..||+.+++..........+ ..+.|+|+|+.|+ +. + .|.+||..+
T Consensus 153 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------------------~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 153 FRGYSTNPLGGVYYVSPDFRTVTPIIQNISVA------------------NGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp CCCBTTBCCEEEEEECTTSCCEEEEEEEESSE------------------EEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ccccccCCCceEEEEeCCCCEEEEeecCCCcc------------------cceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 54 367777787665543322211111 6799999998665 42 4 899999964
No 191
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.03 E-value=0.00017 Score=75.12 Aligned_cols=130 Identities=14% Similarity=0.072 Sum_probs=83.1
Q ss_pred CCCCEeEEEEcCCCCEEEEEEec----CCeEEEEEcCC------C--cee-eeeeccCceEE-------EEEeec-C---
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIY----KPRVRCYETDN------L--SMK-FERCFDSEVVT-------FEILSD-D--- 99 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~----d~~IrvwDl~~------l--slk-~~r~~d~e~v~-------f~~LS~-D--- 99 (358)
++..+..+.|||||++|+.++.. +..|.+||+.+ . ..+ +..+.+..... +.+++. +
T Consensus 231 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~ 310 (710)
T 2xdw_A 231 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPN 310 (710)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTT
T ss_pred CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCC
Confidence 35557899999999999776531 56899999864 2 111 11111111000 111111 0
Q ss_pred ---------------CC--------CCeeEEEEcCCCCEEEEEeCCCe--EEEEeCCCCceeEEEeCCCCccccccCCCc
Q psy2085 100 ---------------YS--------SELNSIAINPVHQLICVGTIEGK--VEAWDPRMKVKAGTLDCAFNCISNERDTEE 154 (358)
Q Consensus 100 ---------------~s--------~~In~i~~np~~~llasGs~DGt--V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~g 154 (358)
+. ..|..++|++.+.+++++..||. |.+||+.+++.+..|..+...+
T Consensus 311 ~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v-------- 382 (710)
T 2xdw_A 311 YRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSV-------- 382 (710)
T ss_dssp CEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEE--------
T ss_pred CEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceE--------
Confidence 00 14777888888889999988885 5567877787777777654333
Q ss_pred cccccCCCceeeEEcCCCCEEE-E--e---c-ceEEEECCCCc
Q psy2085 155 KEGKASSDESSEEEEEEEEEEE-S--S---D-DDQAWTKEIKK 190 (358)
Q Consensus 155 l~GtRs~~P~sI~fs~d~~~ll-S--a---D-~IKIWD~~tG~ 190 (358)
..+.++|+++.|+ + + . +|.+||+.+|+
T Consensus 383 ---------~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 383 ---------VGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp ---------EEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred ---------EEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 5688899887665 2 2 2 89999998876
No 192
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.03 E-value=0.00012 Score=67.82 Aligned_cols=105 Identities=15% Similarity=0.084 Sum_probs=77.7
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcC--CCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCe
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETD--NLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGK 124 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~--~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGt 124 (358)
..+.++|+|||++|.++.+..++|.+||+. +..+...+. +..+.. ..+....+++.+++++.++...++.
T Consensus 150 ~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~-------~~~~~~-~~~~p~g~~~d~~G~lwva~~~~~~ 221 (297)
T 3g4e_A 150 ISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRS-------VYKLEK-EEQIPDGMCIDAEGKLWVACYNGGR 221 (297)
T ss_dssp BEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEE-------EEECCG-GGCEEEEEEEBTTSCEEEEEETTTE
T ss_pred cccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEE-------EEECCC-CCCCCCeeEECCCCCEEEEEcCCCE
Confidence 458999999999988888888899999984 332211110 111111 1135688999999999998888899
Q ss_pred EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEc-CCCCEEE
Q psy2085 125 VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEE-EEEEEEE 176 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs-~d~~~ll 176 (358)
|.+||+.+++.+..+..+...+ .+++|. |+++.|+
T Consensus 222 v~~~d~~tG~~~~~i~~p~~~~-----------------t~~~f~g~d~~~L~ 257 (297)
T 3g4e_A 222 VIRLDPVTGKRLQTVKLPVDKT-----------------TSCCFGGKNYSEMY 257 (297)
T ss_dssp EEEECTTTCCEEEEEECSSSBE-----------------EEEEEESGGGCEEE
T ss_pred EEEEcCCCceEEEEEECCCCCc-----------------eEEEEeCCCCCEEE
Confidence 9999999999999988764433 789998 7887665
No 193
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.97 E-value=5.2e-05 Score=79.60 Aligned_cols=113 Identities=7% Similarity=-0.144 Sum_probs=74.2
Q ss_pred CEeEEEEcCCCCEEEEEEecC----CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC
Q psy2085 47 VSTSVRISPDGQYVLSTGIYK----PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE 122 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d----~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D 122 (358)
.+..++|||||++|+.+.+.. .+|++||+.+....-. . + .. ..+..++|+|+ +.|+.++.|
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~---------~-~~---~~~~~~~wspD-~~l~~~~~~ 228 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-E---------L-KW---VKFSGLAWLGN-DALLYSRFA 228 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-E---------E-EE---EESCCCEESTT-SEEEEEECC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-c---------C-CC---ceeccEEEECC-CEEEEEEec
Confidence 578999999999987665433 3699999987543110 0 0 00 11357899999 988888876
Q ss_pred Ce--------------EEEEeCCCCcee--EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e------c
Q psy2085 123 GK--------------VEAWDPRMKVKA--GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S------D 179 (358)
Q Consensus 123 Gt--------------V~iWD~Rs~~~i--~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a------D 179 (358)
+. |.+|++.++... -......++.. . .++.|||||++|+. + .
T Consensus 229 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~----~-----------~~~~~SpDG~~l~~~~~~~~~~~ 293 (741)
T 1yr2_A 229 EPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKR----G-----------HGASVSSDGRWVVITSSEGTDPV 293 (741)
T ss_dssp CC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTC----E-----------EEEEECTTSCEEEEEEECTTCSC
T ss_pred CcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeE----E-----------EEEEECCCCCEEEEEEEccCCCc
Confidence 64 889998777632 22222221100 0 56899999998773 2 2
Q ss_pred -ceEEEECCCC
Q psy2085 180 -DDQAWTKEIK 189 (358)
Q Consensus 180 -~IKIWD~~tG 189 (358)
.|.+||+.+|
T Consensus 294 ~~l~~~d~~~~ 304 (741)
T 1yr2_A 294 NTVHVARVTNG 304 (741)
T ss_dssp CEEEEEEEETT
T ss_pred ceEEEEECCCC
Confidence 7889998665
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.95 E-value=0.00012 Score=75.54 Aligned_cols=102 Identities=12% Similarity=0.041 Sum_probs=78.6
Q ss_pred CCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCC--CCc
Q psy2085 57 GQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPR--MKV 134 (358)
Q Consensus 57 G~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~R--s~~ 134 (358)
+..++++...+++|.++|+.+..+.. .+. -. ..+..+.|+|++.++.+++.||.|.+||+. +++
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~--~i~----------~g--~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~ 231 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKT--VLD----------TG--YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT 231 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEE--EEE----------CS--SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEE--EEe----------CC--CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCc
Confidence 34566777788999999998754321 110 01 246789999999999889999999999996 888
Q ss_pred eeEEEeCCCCccccccCCCccccccCCCceeeEEc----CCCCEEEEe---c-ceEEEECCCCc
Q psy2085 135 KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEE----EEEEEEESS---D-DDQAWTKEIKK 190 (358)
Q Consensus 135 ~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs----~d~~~llSa---D-~IKIWD~~tG~ 190 (358)
.+..+.....+ ..|.|+ |+|++++.+ + +|.|+|..+++
T Consensus 232 ~v~~i~~G~~P------------------~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~ 277 (567)
T 1qks_A 232 TVAEIKIGSEA------------------RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE 277 (567)
T ss_dssp EEEEEECCSEE------------------EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC
T ss_pred EeEEEecCCCC------------------ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc
Confidence 88888765544 679999 699988853 3 99999998877
No 195
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.91 E-value=0.00023 Score=70.17 Aligned_cols=100 Identities=9% Similarity=-0.037 Sum_probs=70.9
Q ss_pred CCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCe
Q psy2085 45 PGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGK 124 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGt 124 (358)
...+.++++.+.. +++++.+|+|.+||+.+.... . +. ..|.|++|||.| ++.|..||+
T Consensus 126 ~~~v~~i~~~~p~---~av~~~dG~L~v~dl~~~~~~--~-----------~~----~~Vs~v~WSpkG--~~vg~~dg~ 183 (388)
T 1xip_A 126 EKPVFQLKNVNNT---LVILNSVNDLSALDLRTKSTK--Q-----------LA----QNVTSFDVTNSQ--LAVLLKDRS 183 (388)
T ss_dssp SSCEEEEEECSSE---EEEEETTSEEEEEETTTCCEE--E-----------EE----ESEEEEEECSSE--EEEEETTSC
T ss_pred ecceeeEEecCCC---EEEEECCCCEEEEEccCCccc--c-----------cc----CCceEEEEcCCc--eEEEEcCCc
Confidence 3446777777653 355678999999999865432 1 11 469999999999 688999999
Q ss_pred EEEEeCCCCce--eEEEeCCCCcc---ccccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 125 VEAWDPRMKVK--AGTLDCAFNCI---SNERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 125 V~iWD~Rs~~~--i~~L~~~~~~v---~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
|++|++..+.. .++|.++...- ...+.+ .+|.|.+++.++++
T Consensus 184 i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V-----------~sI~wl~~~~flv~ 230 (388)
T 1xip_A 184 FQSFAWRNGEMEKQFEFSLPSELEELPVEEYSP-----------LSVTILSPQDFLAV 230 (388)
T ss_dssp EEEEEEETTEEEEEEEECCCHHHHTSCTTTSEE-----------EEEEESSSSEEEEE
T ss_pred EEEEcCCCccccccceecCCcccccccCCCeeE-----------EEEEEecCCeEEEE
Confidence 99999988875 67774321110 001112 78999999988886
No 196
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.82 E-value=2.3e-05 Score=81.31 Aligned_cols=136 Identities=15% Similarity=0.091 Sum_probs=90.7
Q ss_pred EEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeecc--CceEEEEEeecCCCCCeeEEEEcCCCCEE
Q psy2085 39 IQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFD--SEVVTFEILSDDYSSELNSIAINPVHQLI 116 (358)
Q Consensus 39 iqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d--~e~v~f~~LS~D~s~~In~i~~np~~~ll 116 (358)
+..+..+....+|.+||||+|+++++...++|.++|+.++...+...++ ..++. . +..+ .+-..++|+|++.+.
T Consensus 270 ~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~-~-v~vG--~gP~h~aF~~dG~aY 345 (595)
T 1fwx_A 270 TRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVA-E-PELG--LGPLHTAFDGRGNAY 345 (595)
T ss_dssp EEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEE-C-CBCC--SCEEEEEECTTSEEE
T ss_pred EEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEE-E-cCCC--CCcceEEECCCCeEE
Confidence 3444445566789999999999999988999999999854211111111 11111 0 1111 467899999999666
Q ss_pred EEEeCCCeEEEEeCCC----------CceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe-----cce
Q psy2085 117 CVGTIEGKVEAWDPRM----------KVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS-----DDD 181 (358)
Q Consensus 117 asGs~DGtV~iWD~Rs----------~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa-----D~I 181 (358)
.+---|++|..||+.+ ...+.+++.+..+.-.+.+ ..+.++|||++|+++ |.+
T Consensus 346 ~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~------------~g~t~~~DGk~l~~~Nk~skdr~ 413 (595)
T 1fwx_A 346 TSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTV------------MGETLDATNDWLVCLSKFSKDRF 413 (595)
T ss_dssp EEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEET------------TTTSTTCCSSEEEEEESCCTTSS
T ss_pred EEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceec------------cceEeCCCCCEEEEcCCCCcccc
Confidence 6777799999999977 5678888887664200000 234568999999874 344
Q ss_pred -----------EEEECCCCc
Q psy2085 182 -----------QAWTKEIKK 190 (358)
Q Consensus 182 -----------KIWD~~tG~ 190 (358)
.+.|+..++
T Consensus 414 ~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 414 LNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CCCCSSCCEEEEEEECSSSS
T ss_pred ccCCCCCCCcceEEEcCCCc
Confidence 789996666
No 197
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.81 E-value=0.00024 Score=63.49 Aligned_cols=111 Identities=11% Similarity=-0.037 Sum_probs=76.4
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVE 126 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~ 126 (358)
..++++++|+|+ |.++....+.|.+||......... . ......++.|+++|++.++++...++.|.
T Consensus 151 ~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~~~~--~-----------~~~~~~p~~i~~d~~g~l~v~~~~~~~v~ 216 (270)
T 1rwi_B 151 DPDGVAVDNSGN-VYVTDTDNNRVVKLEAESNNQVVL--P-----------FTDITAPWGIAVDEAGTVYVTEHNTNQVV 216 (270)
T ss_dssp SCCCEEECTTCC-EEEEEGGGTEEEEECTTTCCEEEC--C-----------CSSCCSEEEEEECTTCCEEEEETTTSCEE
T ss_pred CceeEEEeCCCC-EEEEECCCCEEEEEecCCCceEee--c-----------ccCCCCceEEEECCCCCEEEEECCCCcEE
Confidence 467899999998 455555578999999875432110 0 00014578999999999999888899999
Q ss_pred EEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCC
Q psy2085 127 AWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEI 188 (358)
Q Consensus 127 iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~t 188 (358)
+||+...........+.. .|..|+++++|+.+++ .+ .|++++...
T Consensus 217 ~~~~~~~~~~~~~~~~~~-----------------~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 217 KLLAGSTTSTVLPFTGLN-----------------TPLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp EECTTCSCCEECCCCSCS-----------------CEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred EEcCCCCcceeeccCCCC-----------------CceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 999876543221111111 1278999999986666 35 999998864
No 198
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.80 E-value=0.00049 Score=63.60 Aligned_cols=119 Identities=13% Similarity=0.091 Sum_probs=73.6
Q ss_pred EEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCC-CCCeeEEEEcCCCCEEEE
Q psy2085 40 QDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDY-SSELNSIAINPVHQLICV 118 (358)
Q Consensus 40 qdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~-s~~In~i~~np~~~llas 118 (358)
+.+.++..+.++.++|||++++++ ...|.+||..+..++..... .++. ...+|.+++.|++.++++
T Consensus 48 ~~~~~~~~~~~i~~~~dG~l~v~~---~~~l~~~d~~~g~~~~~~~~----------~~~~~~~~~~di~~d~dG~l~~~ 114 (297)
T 3g4e_A 48 QRVTMDAPVSSVALRQSGGYVATI---GTKFCALNWKEQSAVVLATV----------DNDKKNNRFNDGKVDPAGRYFAG 114 (297)
T ss_dssp EEEECSSCEEEEEEBTTSSEEEEE---TTEEEEEETTTTEEEEEEEC----------CTTCSSEEEEEEEECTTSCEEEE
T ss_pred EEEeCCCceEEEEECCCCCEEEEE---CCeEEEEECCCCcEEEEEec----------CCCCCCCCCCCEEECCCCCEEEe
Confidence 345677889999999999965443 46899999876443211111 0110 034799999999998776
Q ss_pred EeC-----------CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe---c-ceEE
Q psy2085 119 GTI-----------EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS---D-DDQA 183 (358)
Q Consensus 119 Gs~-----------DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa---D-~IKI 183 (358)
... .|.|..+|+. ++....+..-..+ +.|+|+|+++.|+.+ + .|.+
T Consensus 115 ~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~p------------------ngi~~spdg~~lyv~~~~~~~i~~ 175 (297)
T 3g4e_A 115 TMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDIS------------------NGLDWSLDHKIFYYIDSLSYSVDA 175 (297)
T ss_dssp EEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBE------------------EEEEECTTSCEEEEEEGGGTEEEE
T ss_pred cCCcccccccccCCCcEEEEEECC-CCEEEEeeccccc------------------cceEEcCCCCEEEEecCCCCcEEE
Confidence 432 2345555553 3222222211111 789999999977643 3 7899
Q ss_pred EEC--CCCc
Q psy2085 184 WTK--EIKK 190 (358)
Q Consensus 184 WD~--~tG~ 190 (358)
||. .+|.
T Consensus 176 ~~~d~~~G~ 184 (297)
T 3g4e_A 176 FDYDLQTGQ 184 (297)
T ss_dssp EEECTTTCC
T ss_pred EeccCCCCc
Confidence 986 4564
No 199
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.77 E-value=0.00058 Score=60.92 Aligned_cols=130 Identities=9% Similarity=0.010 Sum_probs=71.0
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
....+++++|+|+.+ ++.. ++.|.+||........ ... . ....++.|+++|++.++++.+.++.|
T Consensus 67 ~~p~~i~~~~~g~l~-v~~~-~~~i~~~d~~~~~~~~---~~~---------~-~~~~p~~i~~~~~g~l~v~~~~~~~i 131 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVY-VTDF-NNRVVTLAAGSNNQTV---LPF---------D-GLNYPEGLAVDTQGAVYVADRGNNRV 131 (270)
T ss_dssp CSCCCEEECTTCCEE-EEET-TTEEEEECTTCSCCEE---CCC---------C-SCSSEEEEEECTTCCEEEEEGGGTEE
T ss_pred CCcceeEECCCCCEE-EEcC-CCEEEEEeCCCceEee---eec---------C-CcCCCcceEECCCCCEEEEECCCCEE
Confidence 356789999999844 4444 7899999987532211 000 0 00346677777777766666666777
Q ss_pred EEEeCCCCceeEE----EeCCCCcc-cc-------ccCCCccc-----cc--------cCCCceeeEEcCCCCEEEEe--
Q psy2085 126 EAWDPRMKVKAGT----LDCAFNCI-SN-------ERDTEEKE-----GK--------ASSDESSEEEEEEEEEEESS-- 178 (358)
Q Consensus 126 ~iWD~Rs~~~i~~----L~~~~~~v-~~-------~~~i~gl~-----Gt--------Rs~~P~sI~fs~d~~~llSa-- 178 (358)
.+||..+...... +..+.... .. ......+. |. ....|..|+++++|...++.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~ 211 (270)
T 1rwi_B 132 VKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHN 211 (270)
T ss_dssp EEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETT
T ss_pred EEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECC
Confidence 7776554432110 11111100 00 00000000 10 01234889999999776663
Q ss_pred c-ceEEEECCCCc
Q psy2085 179 D-DDQAWTKEIKK 190 (358)
Q Consensus 179 D-~IKIWD~~tG~ 190 (358)
+ .|.+||..+..
T Consensus 212 ~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 212 TNQVVKLLAGSTT 224 (270)
T ss_dssp TSCEEEECTTCSC
T ss_pred CCcEEEEcCCCCc
Confidence 5 89999987543
No 200
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.75 E-value=0.00023 Score=70.18 Aligned_cols=114 Identities=11% Similarity=-0.020 Sum_probs=79.3
Q ss_pred EEEcCCCCEEEEEEec----CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe------
Q psy2085 51 VRISPDGQYVLSTGIY----KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT------ 120 (358)
Q Consensus 51 v~~SpDG~~LlatG~~----d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs------ 120 (358)
+...|||+.+.++-.. +++|.++|+.++... .... . +. .+ . ++++|+++.+..++
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~--~~I~--------v--G~-~P-~-va~spDG~~lyVan~~~~r~ 102 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVI--GMID--------G--GF-LP-N-PVVADDGSFIAHASTVFSRI 102 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEE--EEEE--------E--CS-SC-E-EEECTTSSCEEEEEEEEEET
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEE--EEEE--------C--CC-CC-c-EEECCCCCEEEEEccccccc
Confidence 4557999999888654 679999999875432 1110 1 11 22 4 99999998665544
Q ss_pred ----CCCeEEEEeCCCCceeEEEeCCCCc-cccccCCCccccccCCCceeeEEcCCCCEEEE--e--c-ceEEEECCCCc
Q psy2085 121 ----IEGKVEAWDPRMKVKAGTLDCAFNC-ISNERDTEEKEGKASSDESSEEEEEEEEEEES--S--D-DDQAWTKEIKK 190 (358)
Q Consensus 121 ----~DGtV~iWD~Rs~~~i~~L~~~~~~-v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--a--D-~IKIWD~~tG~ 190 (358)
.+++|.+||+.+++.++++..+... ... ...|..+.|+|||++|+. . + .|-|+|..+++
T Consensus 103 ~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~-----------g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~ 171 (386)
T 3sjl_D 103 ARGERTDYVEVFDPVTLLPTADIELPDAPRFLV-----------GTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA 171 (386)
T ss_dssp TEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB-----------SCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE
T ss_pred ccCCCCCEEEEEECCCCeEEEEEECCCcccccc-----------CCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCc
Confidence 4689999999999999988753210 000 012267999999998773 2 4 89999999988
No 201
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.74 E-value=6.5e-05 Score=78.19 Aligned_cols=115 Identities=11% Similarity=-0.075 Sum_probs=68.7
Q ss_pred cCCCCEEEEEEecCC--eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEE-----EEeCCCeEE
Q psy2085 54 SPDGQYVLSTGIYKP--RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLIC-----VGTIEGKVE 126 (358)
Q Consensus 54 SpDG~~LlatG~~d~--~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~lla-----sGs~DGtV~ 126 (358)
+|||++++-+....+ +-.||-.....-..+.-++.. .++.+++..+.+++|||+|++|| .|+++.+|+
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~-----~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~ 150 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPN-----GWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLH 150 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGG-----GSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchH-----HhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEE
Confidence 389999876544332 344554331111101111100 02223333588999999999998 455567999
Q ss_pred EEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-c-------------eEEEECCCCc
Q psy2085 127 AWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-D-------------DQAWTKEIKK 190 (358)
Q Consensus 127 iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~-------------IKIWD~~tG~ 190 (358)
+||+.+++.+. ..+...+. . ..++|+|||+.|+. .| . |++|++.++.
T Consensus 151 v~dl~tg~~~~--~~~~~~~~----~-----------~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~ 213 (695)
T 2bkl_A 151 VIDVDSGEWSK--VDVIEGGK----Y-----------ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEP 213 (695)
T ss_dssp EEETTTCCBCS--SCCBSCCT----T-----------CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCG
T ss_pred EEECCCCCCcC--CcccCccc----c-----------cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCc
Confidence 99999987641 11111100 0 35899999998884 34 5 9999998876
No 202
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.73 E-value=0.00043 Score=65.55 Aligned_cols=139 Identities=12% Similarity=0.024 Sum_probs=86.9
Q ss_pred ccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEec-CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC
Q psy2085 33 RRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIY-KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP 111 (358)
Q Consensus 33 ~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~-d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np 111 (358)
...+++++.|. .....|+++|||+.+++...+ ++.++||.+.+..+. .-.+... ........+..|++.|
T Consensus 6 ~g~~~~v~~~~--~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~--~~p~~~~-----~~~~~~~~p~gv~~d~ 76 (343)
T 2qe8_A 6 GDRLEVVAELS--LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI--PFPPQSG-----NAIITFDTVLGIKSDG 76 (343)
T ss_dssp --CCEEEEEES--SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE--ESCCCCS-----SCCCCCSCEEEEEECS
T ss_pred CceeEEEEEcC--CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee--cCCCccc-----CcccceeEeeEEEEcC
Confidence 45778888887 668999999999865443222 233566665432221 0000000 0011125789999999
Q ss_pred CCCEEEEEeC-----CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEE-EE-----ec-
Q psy2085 112 VHQLICVGTI-----EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEE-ES-----SD- 179 (358)
Q Consensus 112 ~~~llasGs~-----DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~l-lS-----aD- 179 (358)
++.|+++.+. ++.|.+||+.+++.+.++..+...... ...|+.|.+++++..+ ++ .+
T Consensus 77 ~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~-----------~~~~~~v~vd~~~g~~yvtd~~~~~~~ 145 (343)
T 2qe8_A 77 NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLS-----------NSFVNDLAVDLIHNFVYISDPAPDDKA 145 (343)
T ss_dssp SSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCT-----------TCCCCEEEEETTTTEEEEEECCSGGGC
T ss_pred CCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhccc-----------ccccceEEEecCCCEEEEEcCccCCCC
Confidence 9988887654 689999999999888877654221100 0112789999865554 44 34
Q ss_pred ceEEEECCCCcE
Q psy2085 180 DDQAWTKEIKKT 191 (358)
Q Consensus 180 ~IKIWD~~tG~~ 191 (358)
.|.+||..+|+.
T Consensus 146 ~i~v~d~~~g~~ 157 (343)
T 2qe8_A 146 ALIRVDLQTGLA 157 (343)
T ss_dssp EEEEEETTTCCE
T ss_pred eEEEEECCCCCE
Confidence 999999998873
No 203
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.62 E-value=0.00092 Score=62.85 Aligned_cols=115 Identities=9% Similarity=-0.017 Sum_probs=72.3
Q ss_pred eeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCC-CCCeeEEEEcCCCCEEEEEe
Q psy2085 42 FEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDY-SSELNSIAINPVHQLICVGT 120 (358)
Q Consensus 42 fe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~-s~~In~i~~np~~~llasGs 120 (358)
+.++..+.++.++|||++++++ ...|.+||+.+...+..... ..+. ...++.++++|++.++++..
T Consensus 86 ~~~~~~v~~i~~~~dg~l~v~~---~~gl~~~d~~~g~~~~~~~~----------~~~~~~~~~~~i~~d~~G~l~v~~~ 152 (326)
T 2ghs_A 86 HALPFMGSALAKISDSKQLIAS---DDGLFLRDTATGVLTLHAEL----------ESDLPGNRSNDGRMHPSGALWIGTM 152 (326)
T ss_dssp EECSSCEEEEEEEETTEEEEEE---TTEEEEEETTTCCEEEEECS----------STTCTTEEEEEEEECTTSCEEEEEE
T ss_pred EECCCcceEEEEeCCCeEEEEE---CCCEEEEECCCCcEEEEeeC----------CCCCCCCCCCCEEECCCCCEEEEeC
Confidence 4567789999999999977654 34599999876543211110 0000 03589999999999877654
Q ss_pred C------CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe---c-ceEEEECC--C
Q psy2085 121 I------EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS---D-DDQAWTKE--I 188 (358)
Q Consensus 121 ~------DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa---D-~IKIWD~~--t 188 (358)
. .+.|..+| +++.. .+....... +.+.|+|+++.|+.+ + .|.+||.. +
T Consensus 153 ~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~-----------------~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~ 212 (326)
T 2ghs_A 153 GRKAETGAGSIYHVA--KGKVT-KLFADISIP-----------------NSICFSPDGTTGYFVDTKVNRLMRVPLDART 212 (326)
T ss_dssp ETTCCTTCEEEEEEE--TTEEE-EEEEEESSE-----------------EEEEECTTSCEEEEEETTTCEEEEEEBCTTT
T ss_pred CCcCCCCceEEEEEe--CCcEE-EeeCCCccc-----------------CCeEEcCCCCEEEEEECCCCEEEEEEccccc
Confidence 2 24555556 44432 222111111 679999999877543 3 89999986 6
Q ss_pred C
Q psy2085 189 K 189 (358)
Q Consensus 189 G 189 (358)
|
T Consensus 213 G 213 (326)
T 2ghs_A 213 G 213 (326)
T ss_dssp C
T ss_pred C
Confidence 6
No 204
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.57 E-value=0.0028 Score=59.53 Aligned_cols=104 Identities=12% Similarity=0.034 Sum_probs=73.0
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcC--CC-ceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETD--NL-SMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG 123 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~--~l-slk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG 123 (358)
..+.++|+|||++|..+.+..+.|.+||+. +. .+...+ .+..+.. .......+++.+++.++++...++
T Consensus 180 ~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~-------~~~~~~~-~~~~p~gi~~d~~G~lwva~~~~~ 251 (326)
T 2ghs_A 180 IPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAE-------VFIDSTG-IKGGMDGSVCDAEGHIWNARWGEG 251 (326)
T ss_dssp SEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCE-------EEEECTT-SSSEEEEEEECTTSCEEEEEETTT
T ss_pred ccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCce-------EEEECCC-CCCCCCeeEECCCCCEEEEEeCCC
Confidence 468899999999887777777899999986 32 221000 0111111 113467899999999888877788
Q ss_pred eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEc-CCCCEEE
Q psy2085 124 KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEE-EEEEEEE 176 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs-~d~~~ll 176 (358)
.|.+||+ +++.+..+..+...+ .+++|+ ++++.|+
T Consensus 252 ~v~~~d~-~g~~~~~i~~~~~~~-----------------~~~af~g~d~~~L~ 287 (326)
T 2ghs_A 252 AVDRYDT-DGNHIARYEVPGKQT-----------------TCPAFIGPDASRLL 287 (326)
T ss_dssp EEEEECT-TCCEEEEEECSCSBE-----------------EEEEEESTTSCEEE
T ss_pred EEEEECC-CCCEEEEEECCCCCc-----------------EEEEEecCCCCEEE
Confidence 9999999 677777777654333 789998 8887664
No 205
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.55 E-value=0.0044 Score=55.44 Aligned_cols=113 Identities=10% Similarity=0.021 Sum_probs=76.9
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
..+.++.++|+|+..++ ....+.|.+||.. .... ... + +.....+.+|++.|++.++++...+|.|
T Consensus 15 ~~~~~i~~d~~g~l~v~-~~~~~~v~~~d~~-~~~~--~~~---------~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i 80 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWIT-QHKANMISCINLD-GKIT--EYP---------L-PTPDAKVMCLTISSDGEVWFTENAANKI 80 (299)
T ss_dssp CCEEEEEECTTSCEEEE-ETTTTEEEEECTT-CCEE--EEE---------C-SSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CCccceEECCCCCEEEE-ecCCCcEEEEcCC-CCeE--Eec---------C-CcccCceeeEEECCCCCEEEeCCCCCeE
Confidence 46899999999986544 3346789999987 3221 110 0 1111568899999999999888878999
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
..||+. +. +..+..+... ..|..|.++++|...++. + .|.+||. +|+
T Consensus 81 ~~~~~~-g~-~~~~~~~~~~---------------~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~ 130 (299)
T 2z2n_A 81 GRITKK-GI-IKEYTLPNPD---------------SAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK 130 (299)
T ss_dssp EEECTT-SC-EEEEECSSTT---------------CCEEEEEECTTSCEEEEETTTTEEEEECT-TCC
T ss_pred EEECCC-Cc-EEEEeCCCcC---------------CCceeeEECCCCCEEEEecCCceEEEECC-CCC
Confidence 999986 33 3333322110 011789999999877763 4 8999998 665
No 206
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.53 E-value=0.0036 Score=58.54 Aligned_cols=124 Identities=13% Similarity=0.063 Sum_probs=83.7
Q ss_pred ceeEEEEeeCCCC--EeEEEEcCCCCEEEEEEec-CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC
Q psy2085 35 RIELIQDFEMPGV--STSVRISPDGQYVLSTGIY-KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP 111 (358)
Q Consensus 35 rIeliqdfe~~~~--v~~v~~SpDG~~LlatG~~-d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np 111 (358)
..++++.+.|+.. ...+.|+|||...+++|.+ ..+|+++|+.+.... +.. .+.+. ...-.+++..
T Consensus 8 ~~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~--~~i--------~l~~~--~fgeGi~~~g 75 (266)
T 2iwa_A 8 IVEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVE--NIH--------KMDDS--YFGEGLTLLN 75 (266)
T ss_dssp EEEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEE--EEE--------ECCTT--CCEEEEEEET
T ss_pred CceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEE--EEE--------ecCCC--cceEEEEEeC
Confidence 4688999999865 5899999998544445533 579999999875432 111 11111 1223445542
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec---ceEEEECCC
Q psy2085 112 VHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD---DDQAWTKEI 188 (358)
Q Consensus 112 ~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD---~IKIWD~~t 188 (358)
+.+.++.-.+++|-++|+.+.+.++++... .+ ....+++||+.|+.+| .|.++|..+
T Consensus 76 -~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~~------------------~g~glt~Dg~~l~vs~gs~~l~viD~~t 135 (266)
T 2iwa_A 76 -EKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-MK------------------DGWGLATDGKILYGSDGTSILYEIDPHT 135 (266)
T ss_dssp -TEEEEEETTCSEEEEEETTTTEEEEEEECC-SS------------------SCCEEEECSSSEEEECSSSEEEEECTTT
T ss_pred -CEEEEEEecCCEEEEEECCCCcEEEEEECC-CC------------------CeEEEEECCCEEEEECCCCeEEEEECCC
Confidence 346666667899999999999999998754 22 2244566777777544 999999998
Q ss_pred Cc
Q psy2085 189 KK 190 (358)
Q Consensus 189 G~ 190 (358)
.+
T Consensus 136 ~~ 137 (266)
T 2iwa_A 136 FK 137 (266)
T ss_dssp CC
T ss_pred Cc
Confidence 77
No 207
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.53 E-value=0.0011 Score=61.34 Aligned_cols=98 Identities=8% Similarity=0.012 Sum_probs=71.8
Q ss_pred EEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE
Q psy2085 60 VLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTL 139 (358)
Q Consensus 60 LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L 139 (358)
++++|+.++.|.+||..+....+...... ...++++++.|++++|+ +.++.|.+||+ +++.+-.+
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~~~w~~~~~~------------~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~ 71 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKEIVWEYPLEK------------GWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNI 71 (276)
T ss_dssp EEEECTTCSEEEEEETTTTEEEEEEECCT------------TCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEE
T ss_pred EEEeeCCCCEEEEEECCCCeEEEEeCCCc------------cCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEE
Confidence 45778899999999987765443322110 02578999999999999 44788999999 89988888
Q ss_pred eCCCC-ccccccCCCccccccCCCceeeEEcCCCCEEEE--e-c-ceEEEECCCCc
Q psy2085 140 DCAFN-CISNERDTEEKEGKASSDESSEEEEEEEEEEES--S-D-DDQAWTKEIKK 190 (358)
Q Consensus 140 ~~~~~-~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--a-D-~IKIWD~~tG~ 190 (358)
..+.. .+ .++.+.++|+.|++ . + .|..+|. +|+
T Consensus 72 ~~~~~~~~-----------------~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk 109 (276)
T 3no2_A 72 AAPAGCEM-----------------QTARILPDGNALVAWCGHPSTILEVNM-KGE 109 (276)
T ss_dssp ECCTTCEE-----------------EEEEECTTSCEEEEEESTTEEEEEECT-TSC
T ss_pred cCCCCccc-----------------cccEECCCCCEEEEecCCCCEEEEEeC-CCC
Confidence 76421 22 67889999999886 3 4 6667776 576
No 208
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.51 E-value=0.0028 Score=58.49 Aligned_cols=113 Identities=12% Similarity=0.040 Sum_probs=75.1
Q ss_pred cceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC
Q psy2085 34 RRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH 113 (358)
Q Consensus 34 ~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~ 113 (358)
.++|.+.+ -........|+|||++|+.++...+.|..|+... .... + ..+. ..++.++++|++
T Consensus 35 ~~~~~l~~--~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g-~~~~----------~--~~~~--~~~~gl~~d~dG 97 (305)
T 3dr2_A 35 ARLLTLYD--QATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG-TVDV----------L--LDAT--AFTNGNAVDAQQ 97 (305)
T ss_dssp CCCEEEEC--CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS-CEEE----------E--EESC--SCEEEEEECTTS
T ss_pred CceEEEec--CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC-CEEE----------E--eCCC--CccceeeECCCC
Confidence 35665543 2234578999999998888888889999998742 2211 1 0111 468999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 114 QLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 114 ~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
.++++...++.|.+||+. ++ +..+....... +...|+.|.++++|+..+|
T Consensus 98 ~l~v~~~~~~~v~~~~~~-g~-~~~~~~~~~~~------------~~~~~~~i~~d~dG~l~~t 147 (305)
T 3dr2_A 98 RLVHCEHGRRAITRSDAD-GQ-AHLLVGRYAGK------------RLNSPNDLIVARDGAIWFT 147 (305)
T ss_dssp CEEEEETTTTEEEEECTT-SC-EEEEECEETTE------------ECSCCCCEEECTTSCEEEE
T ss_pred CEEEEECCCCEEEEECCC-CC-EEEEEeccCCC------------ccCCCCCEEECCCCCEEEe
Confidence 988887777899999985 54 33332211110 0111277999999998885
No 209
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.47 E-value=0.0012 Score=68.91 Aligned_cols=112 Identities=7% Similarity=-0.053 Sum_probs=74.0
Q ss_pred CCEeEEEEcCCCCEEEEE----EecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCC--eeEEEEcCCCCEEEEE
Q psy2085 46 GVSTSVRISPDGQYVLST----GIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSE--LNSIAINPVHQLICVG 119 (358)
Q Consensus 46 ~~v~~v~~SpDG~~Llat----G~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~--In~i~~np~~~llasG 119 (358)
..+..++|||||++|+-+ |+...+|+|||+.+....-. + + .. ...++|+ +++.|+.+
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~---------~------~~~k~~~~~Ws-Dg~~l~y~ 191 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-P---------L------KDVKFSGISWL-GNEGFFYS 191 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-E---------E------EEEESCCCEEE-TTTEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-c---------c------CCceeccEEEe-CCCEEEEE
Confidence 368889999999998654 33335799999987542110 0 0 11 2467899 99988888
Q ss_pred eCCCe-------------EEEEeCCCCce--eEEEeCCC-CccccccCCCccccccCCCceeeEEcCCCCEEE-E-e---
Q psy2085 120 TIEGK-------------VEAWDPRMKVK--AGTLDCAF-NCISNERDTEEKEGKASSDESSEEEEEEEEEEE-S-S--- 178 (358)
Q Consensus 120 s~DGt-------------V~iWD~Rs~~~--i~~L~~~~-~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-S-a--- 178 (358)
+.++. |.+|++.++.. ........ +... . .++.|+|||++|+ + .
T Consensus 192 ~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~----~-----------~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 192 SYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHR----Y-----------VGATVTEDDRFLLISAANST 256 (693)
T ss_dssp ESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCS----E-----------EEEEECTTSCEEEEEEESSS
T ss_pred EecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeE----E-----------EEEEEcCCCCEEEEEEccCC
Confidence 88754 99999887653 22222221 1100 0 5688999999875 3 2
Q ss_pred -c-ceEEEECCCC
Q psy2085 179 -D-DDQAWTKEIK 189 (358)
Q Consensus 179 -D-~IKIWD~~tG 189 (358)
+ .|.+||+.++
T Consensus 257 ~~~~i~~~d~~~~ 269 (693)
T 3iuj_A 257 SGNRLYVKDLSQE 269 (693)
T ss_dssp SCCEEEEEETTST
T ss_pred CCcEEEEEECCCC
Confidence 2 7889998776
No 210
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.45 E-value=0.0045 Score=55.38 Aligned_cols=113 Identities=10% Similarity=0.038 Sum_probs=77.3
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
..+.++.++|+|+.. ++....+.|.+||. +.... . +. + +.....++++++.|++.++++...++.|
T Consensus 99 ~~~~~i~~~~~g~l~-v~~~~~~~i~~~d~-~g~~~--~--------~~-~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 99 SAPYGITEGPNGDIW-FTEMNGNRIGRITD-DGKIR--E--------YE-L-PNKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp CCEEEEEECTTSCEE-EEETTTTEEEEECT-TCCEE--E--------EE-C-SSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CCceeeEECCCCCEE-EEecCCceEEEECC-CCCEE--E--------ec-C-CCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 468899999999754 45555788999998 33221 1 00 1 1111468999999999999888888999
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
..||+ +++... +...... ..|..|.++++|...++. + .|.+||. +|+
T Consensus 165 ~~~~~-~g~~~~-~~~~~~~---------------~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~ 214 (299)
T 2z2n_A 165 GRITE-SGDITE-FKIPTPA---------------SGPVGITKGNDDALWFVEIIGNKIGRITT-SGE 214 (299)
T ss_dssp EEECT-TCCEEE-EECSSTT---------------CCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred EEEcC-CCcEEE-eeCCCCC---------------CcceeEEECCCCCEEEEccCCceEEEECC-CCc
Confidence 99999 665433 2221110 011779999999877764 4 8999999 776
No 211
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.45 E-value=0.0028 Score=61.38 Aligned_cols=112 Identities=6% Similarity=-0.127 Sum_probs=72.4
Q ss_pred EEEEcCCCCEEEEEEe---------cCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe
Q psy2085 50 SVRISPDGQYVLSTGI---------YKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT 120 (358)
Q Consensus 50 ~v~~SpDG~~LlatG~---------~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs 120 (358)
.+.+||||++|.++.. .++.|.+||+.++...-.-..... ..+ +.. ..-..++|+|+++.|.+++
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~-~~~--~~g---~~p~~~~~spDG~~l~v~n 143 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDA-PRF--DVG---PYSWMNANTPNNADLLFFQ 143 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCc-ccc--ccC---CCccceEECCCCCEEEEEe
Confidence 8999999999988753 256799999986543211111000 000 000 1234789999999888776
Q ss_pred C--CCeEEEEeCCCCceeEE-EeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE---Eec-ceEEEECCCCc
Q psy2085 121 I--EGKVEAWDPRMKVKAGT-LDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE---SSD-DDQAWTKEIKK 190 (358)
Q Consensus 121 ~--DGtV~iWD~Rs~~~i~~-L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll---SaD-~IKIWD~~tG~ 190 (358)
. +++|.++| .+++.+.. +..+. .+.+.|++...+ +.| .+.+||. +|+
T Consensus 144 ~~~~~~v~viD-~t~~~~~~~i~~~~---------------------~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 144 FAAGPAVGLVV-QGGSSDDQLLSSPT---------------------CYHIHPGAPSTFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred cCCCCeEEEEE-CCCCEEeEEcCCCc---------------------eEEEEeCCCceEEEEcCCCCEEEEEC-CCc
Confidence 4 58899999 99998887 65432 244455554332 256 8888888 776
No 212
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.42 E-value=0.0031 Score=58.97 Aligned_cols=123 Identities=11% Similarity=0.060 Sum_probs=82.0
Q ss_pred cceeEEEEeeCCCCE--eEEEEcCCCCEEEEEEecC-CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEc
Q psy2085 34 RRIELIQDFEMPGVS--TSVRISPDGQYVLSTGIYK-PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAIN 110 (358)
Q Consensus 34 ~rIeliqdfe~~~~v--~~v~~SpDG~~LlatG~~d-~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~n 110 (358)
...++++.|.|.... ..+.|+ ||....++|.|. .+|+++|+.+....-... +.+.+ .--.|++.
T Consensus 29 ~~~~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~----------l~~~~--FgeGit~~ 95 (262)
T 3nol_A 29 YDYQIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIE----------LGKRY--FGEGISDW 95 (262)
T ss_dssp EEEEEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEE----------CCTTC--CEEEEEEE
T ss_pred cceEEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEe----------cCCcc--ceeEEEEe
Confidence 457899999998765 889999 776555666552 489999998764322111 11111 11223332
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec---ceEEEECC
Q psy2085 111 PVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD---DDQAWTKE 187 (358)
Q Consensus 111 p~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD---~IKIWD~~ 187 (358)
. +.+....-.++.+-++|+.+.+.++++...... ..+ ++++..|+.+| .|.++|..
T Consensus 96 g-~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG------------------~gl--t~dg~~L~~SdGs~~i~~iDp~ 154 (262)
T 3nol_A 96 K-DKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG------------------WGL--THNDQYLIMSDGTPVLRFLDPE 154 (262)
T ss_dssp T-TEEEEEESSSSEEEEEETTTCCEEEEEECSSCC------------------CCE--EECSSCEEECCSSSEEEEECTT
T ss_pred C-CEEEEEEeeCCEEEEEECccCcEEEEEECCCCc------------------eEE--ecCCCEEEEECCCCeEEEEcCC
Confidence 2 345555556899999999999999999865432 223 35677777655 79999999
Q ss_pred CCc
Q psy2085 188 IKK 190 (358)
Q Consensus 188 tG~ 190 (358)
+++
T Consensus 155 T~~ 157 (262)
T 3nol_A 155 SLT 157 (262)
T ss_dssp TCS
T ss_pred CCe
Confidence 877
No 213
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.41 E-value=0.0022 Score=59.23 Aligned_cols=115 Identities=8% Similarity=0.003 Sum_probs=73.8
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee-eeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEE----
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE-RCFDSEVVTFEILSDDYSSELNSIAINPVHQLICV---- 118 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~-r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llas---- 118 (358)
....++.+.++|||+.+ ++....+.|.+||.. ...... ..... .. ...+|.+++.|++.+++|
T Consensus 84 ~~~~~~gl~~d~dG~l~-v~~~~~~~v~~~~~~-g~~~~~~~~~~~--~~--------~~~~~~i~~d~dG~l~~td~~~ 151 (305)
T 3dr2_A 84 ATAFTNGNAVDAQQRLV-HCEHGRRAITRSDAD-GQAHLLVGRYAG--KR--------LNSPNDLIVARDGAIWFTDPPF 151 (305)
T ss_dssp SCSCEEEEEECTTSCEE-EEETTTTEEEEECTT-SCEEEEECEETT--EE--------CSCCCCEEECTTSCEEEECCSG
T ss_pred CCCccceeeECCCCCEE-EEECCCCEEEEECCC-CCEEEEEeccCC--Cc--------cCCCCCEEECCCCCEEEeCcCC
Confidence 34568999999999954 443345689999975 332111 00000 00 035789999999999987
Q ss_pred EeC-------------CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec------
Q psy2085 119 GTI-------------EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD------ 179 (358)
Q Consensus 119 Gs~-------------DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD------ 179 (358)
|+. .+.|..||+.+++..... .... |+.++|+|+++.|+.+|
T Consensus 152 g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~-----------------p~gl~~spdg~~lyv~~~~~~~~ 212 (305)
T 3dr2_A 152 GLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDH-----------------PNGLAFSPDEQTLYVSQTPEQGH 212 (305)
T ss_dssp GGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESS-----------------EEEEEECTTSSEEEEEECCC---
T ss_pred CccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCC-----------------CcceEEcCCCCEEEEEecCCcCC
Confidence 442 367888998777643322 1111 17799999999777543
Q ss_pred ---ceEEEECCCC
Q psy2085 180 ---DDQAWTKEIK 189 (358)
Q Consensus 180 ---~IKIWD~~tG 189 (358)
.|.+||...+
T Consensus 213 ~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 213 GSVEITAFAWRDG 225 (305)
T ss_dssp CCCEEEEEEEETT
T ss_pred CCCEEEEEEecCC
Confidence 4888887654
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.39 E-value=0.0024 Score=62.55 Aligned_cols=114 Identities=15% Similarity=0.056 Sum_probs=75.9
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC--e
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG--K 124 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG--t 124 (358)
....|+|+|+|+ |+++...++.|++||+.+..+... +.. . .... ++|+|+++.|.++..++ .
T Consensus 132 ~P~~la~d~~g~-lyv~d~~~~~I~~id~~~g~~~~~------------~~~-~-~~~~-ia~~~~g~~l~~~d~~~~~~ 195 (409)
T 3hrp_A 132 YMWGIAAVGNNT-VLAYQRDDPRVRLISVDDNKVTTV------------HPG-F-KGGK-PAVTKDKQRVYSIGWEGTHT 195 (409)
T ss_dssp CEEEEEECSTTE-EEEEETTTTEEEEEETTTTEEEEE------------EET-C-CBCB-CEECTTSSEEEEEBSSTTCE
T ss_pred CceEEEEeCCCC-EEEEecCCCcEEEEECCCCEEEEe------------ecc-C-CCCc-eeEecCCCcEEEEecCCCce
Confidence 467899999998 566666778999999986433211 111 1 2233 99999999888877766 8
Q ss_pred EEEEeCCCCceeEEEe-CCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec---ceEEEECCCCc
Q psy2085 125 VEAWDPRMKVKAGTLD-CAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD---DDQAWTKEIKK 190 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~-~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD---~IKIWD~~tG~ 190 (358)
|.+||...+.....+. ..... ...|..++++|++..|+.+| .|..||..++.
T Consensus 196 I~~~d~~~~~~~~~~g~~~~~~--------------~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~ 251 (409)
T 3hrp_A 196 VYVYMKASGWAPTRIGQLGSTF--------------SGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE 251 (409)
T ss_dssp EEEEEGGGTTCEEEEEECCTTS--------------CSCCCBCEECTTSSEEEEECTTCEEEEEETTTCC
T ss_pred EEEEEcCCCceeEEeeeccchh--------------cCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC
Confidence 9999987765544441 00000 01127799999555555455 79999998776
No 215
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.39 E-value=0.0022 Score=64.49 Aligned_cols=120 Identities=15% Similarity=0.103 Sum_probs=81.8
Q ss_pred EEEc--CCCCEEEEEEecCCeEEEEEcCCC--ceeeeeecc-CceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC---
Q psy2085 51 VRIS--PDGQYVLSTGIYKPRVRCYETDNL--SMKFERCFD-SEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE--- 122 (358)
Q Consensus 51 v~~S--pDG~~LlatG~~d~~IrvwDl~~l--slk~~r~~d-~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D--- 122 (358)
..++ +++++|+++|..+.+|.|+|+.+. ..+..+..+ .++.. ..++ ..-..+...|++ +++++..+
T Consensus 87 ~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~----~~g~-s~Ph~~~~~pdG-i~Vs~~g~~~g 160 (462)
T 2ece_A 87 PNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKK----VSGY-SRLHTVHCGPDA-IYISALGNEEG 160 (462)
T ss_dssp TTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHH----HHCE-EEEEEEEECSSC-EEEEEEEETTS
T ss_pred cccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhccc----ccCC-CcccceeECCCe-EEEEcCCCcCC
Confidence 3558 999999999999999999999743 233322221 00000 0000 122456677888 77666555
Q ss_pred ---CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe---------------------
Q psy2085 123 ---GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--------------------- 178 (358)
Q Consensus 123 ---GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--------------------- 178 (358)
|.|-+.|..+++.++++.....+... +..+.|+|+++.++|+
T Consensus 161 ~~~g~v~vlD~~T~~v~~~~~~~~~~~~~--------------~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~ 226 (462)
T 2ece_A 161 EGPGGILMLDHYSFEPLGKWEIDRGDQYL--------------AYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRY 226 (462)
T ss_dssp CSCCEEEEECTTTCCEEEECCSBCTTCCC--------------CCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHS
T ss_pred CCCCeEEEEECCCCeEEEEEccCCCCccc--------------cceEEECCCCCEEEEccCcCccccccccchhhhhhcc
Confidence 89999999999999998744322110 0568899999999875
Q ss_pred c-ceEEEECCCCc
Q psy2085 179 D-DDQAWTKEIKK 190 (358)
Q Consensus 179 D-~IKIWD~~tG~ 190 (358)
+ +|.+||..+++
T Consensus 227 ~d~V~v~D~~~~k 239 (462)
T 2ece_A 227 GNRIHFWDLRKRK 239 (462)
T ss_dssp CCEEEEEETTTTE
T ss_pred CCEEEEEECCCCc
Confidence 5 99999999877
No 216
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.38 E-value=0.0015 Score=68.34 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=25.6
Q ss_pred CCEeEEEEcCCCCEEEEEEec----CCeEEEEEcCCC
Q psy2085 46 GVSTSVRISPDGQYVLSTGIY----KPRVRCYETDNL 78 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~----d~~IrvwDl~~l 78 (358)
..+..+.|||||++|+.++.. ...|.+||+.+.
T Consensus 268 ~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 268 KRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp TCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred eEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCC
Confidence 357899999999999776642 348999998654
No 217
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.34 E-value=0.0021 Score=58.47 Aligned_cols=112 Identities=13% Similarity=0.098 Sum_probs=70.9
Q ss_pred CEeEEEEcCCCCEEEEEEec--------------CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEc--
Q psy2085 47 VSTSVRISPDGQYVLSTGIY--------------KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAIN-- 110 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~--------------d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~n-- 110 (358)
.+++++++|+|+..+++... .+.|.+||.. ... .... ..+ ...+.++++
T Consensus 118 ~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~--~~~~-------~~~-----~~~~~i~~~~~ 182 (314)
T 1pjx_A 118 GCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM--IQVD-------TAF-----QFPNGIAVRHM 182 (314)
T ss_dssp CCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE--EEEE-------EEE-----SSEEEEEEEEC
T ss_pred CCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE--EEec-------cCC-----CCcceEEEecc
Confidence 47899999999866554322 1456666654 221 1110 001 356889999
Q ss_pred --CCCC-EEEEEeCCCeEEEEeCC-CCce-----eEEEeCCC-CccccccCCCccccccCCCceeeEEcCCCCEEEE--e
Q psy2085 111 --PVHQ-LICVGTIEGKVEAWDPR-MKVK-----AGTLDCAF-NCISNERDTEEKEGKASSDESSEEEEEEEEEEES--S 178 (358)
Q Consensus 111 --p~~~-llasGs~DGtV~iWD~R-s~~~-----i~~L~~~~-~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--a 178 (358)
|+++ ++++.+.++.|.+||+. ++.. ...+..+. .. |..|.++++|...++ .
T Consensus 183 ~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~-----------------p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 183 NDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGG-----------------ADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp TTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCE-----------------EEEEEEBTTCCEEEEEET
T ss_pred cCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCC-----------------CCceEECCCCCEEEEEcC
Confidence 9985 56666778999999986 4432 11121111 11 167999999988776 3
Q ss_pred c-ceEEEECCCCc
Q psy2085 179 D-DDQAWTKEIKK 190 (358)
Q Consensus 179 D-~IKIWD~~tG~ 190 (358)
+ .|.+||..+|+
T Consensus 246 ~~~i~~~d~~~g~ 258 (314)
T 1pjx_A 246 SSHIEVFGPDGGQ 258 (314)
T ss_dssp TTEEEEECTTCBS
T ss_pred CCEEEEEcCCCCc
Confidence 5 89999998776
No 218
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.30 E-value=3.7e-05 Score=74.34 Aligned_cols=138 Identities=9% Similarity=0.011 Sum_probs=63.2
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
...|.++.++.+..|+...++ ++..++. +.+.+..+.++|..+ ++++.++.|.+||..+......
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~-------------~~W~~~~-~~~~s~p~~~~g~~~-v~~s~dg~l~a~d~~tG~~~w~ 74 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGS-------------IKWTLKE-DPVLQVPTHVEEPAF-LPDPNDGSLYTLGSKNNEGLTK 74 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCC-------------EEEEEEC-CCSCCCC-----CCE-EECTTTCCEEEC-----CCSEE
T ss_pred CEEEEEcCCCEEEEEECCCCC-------------EEEEecC-CCceecceEcCCCEE-EEeCCCCEEEEEECCCCceeee
Confidence 467888999999999843332 2222333 334445566777644 4567899999999976543222
Q ss_pred eeccCc-eEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCC
Q psy2085 84 RCFDSE-VVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSD 162 (358)
Q Consensus 84 r~~d~e-~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~ 162 (358)
...+.. .+ ....+ + ..+..+++|+.||.|.+||+++|+.+-.+..+.
T Consensus 75 ~~~~~~~~~--------~~sp~----~-~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~------------------- 122 (369)
T 2hz6_A 75 LPFTIPELV--------QASPC----R-SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF------------------- 122 (369)
T ss_dssp CSCCHHHHH--------TTCSC----C------CCCCEEEEEEEEECCC-------------------------------
T ss_pred eeccCcccc--------ccCce----E-ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC-------------------
Confidence 111100 00 00111 1 134567788899999999999999877665432
Q ss_pred ceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 163 ESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 163 P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+.++|++..|++ .| .|..||..+|+
T Consensus 123 --~~~~~p~~~~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 123 --ADSLSPSTSLLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp ------------EEEEEEEEEEECCCSSSSS
T ss_pred --cccccccCCEEEEEecCCEEEEEECCCCC
Confidence 1334566666664 56 99999999998
No 219
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.26 E-value=0.0047 Score=60.83 Aligned_cols=82 Identities=15% Similarity=0.086 Sum_probs=58.4
Q ss_pred EEEcCCCCEEEEEEec---------CCeEEEEEcCCCceeeeeeccCceEEEEEeecCC----CCCeeEEEEcCCCCEEE
Q psy2085 51 VRISPDGQYVLSTGIY---------KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDY----SSELNSIAINPVHQLIC 117 (358)
Q Consensus 51 v~~SpDG~~LlatG~~---------d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~----s~~In~i~~np~~~lla 117 (358)
+.+||||++|.++.++ ++.|.+||+.++...- . ..+...- ...-..++|+|+++.+.
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~--~--------I~v~~g~r~~~g~~P~~~a~spDGk~ly 152 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTA--D--------IELPDAPRFLVGTYPWMTSLTPDGKTLL 152 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEE--E--------EEETTCCCCCBSCCGGGEEECTTSSEEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEE--E--------EECCCccccccCCCCceEEEcCCCCEEE
Confidence 9999999998877542 4679999998764321 1 1111100 01345789999999776
Q ss_pred EEeC--CCeEEEEeCCCCceeEEEeCC
Q psy2085 118 VGTI--EGKVEAWDPRMKVKAGTLDCA 142 (358)
Q Consensus 118 sGs~--DGtV~iWD~Rs~~~i~~L~~~ 142 (358)
.+.. +++|.++|+.+++.++++..+
T Consensus 153 Van~~~~~~VsVID~~t~~vv~tI~v~ 179 (386)
T 3sjl_D 153 FYQFSPAPAVGVVDLEGKAFKRMLDVP 179 (386)
T ss_dssp EEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred EEEcCCCCeEEEEECCCCcEEEEEECC
Confidence 6653 789999999999999999754
No 220
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.25 E-value=0.0083 Score=55.43 Aligned_cols=123 Identities=11% Similarity=0.003 Sum_probs=81.9
Q ss_pred cceeEEEEeeCCCC--EeEEEEcCCCCEEEEEEec-CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEc
Q psy2085 34 RRIELIQDFEMPGV--STSVRISPDGQYVLSTGIY-KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAIN 110 (358)
Q Consensus 34 ~rIeliqdfe~~~~--v~~v~~SpDG~~LlatG~~-d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~n 110 (358)
-..++++.|.|+.. ...+.|++ |....++|.| ..+|+++|+.+....-....+ +.+ .--.+++.
T Consensus 7 ~~~~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~----------~~~--fgeGi~~~ 73 (243)
T 3mbr_X 7 QGYRVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVP----------PPY--FGAGIVAW 73 (243)
T ss_dssp CCEEEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECC----------TTC--CEEEEEEE
T ss_pred cceEEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCC----------CCc--ceeEEEEe
Confidence 45789999999865 55899987 5555566655 358999999876443221111 110 11223333
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec---ceEEEECC
Q psy2085 111 PVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD---DDQAWTKE 187 (358)
Q Consensus 111 p~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD---~IKIWD~~ 187 (358)
. +.+....-.++.+-++|+.+.+.++++...... ..+.+++..|+.+| .|.++|..
T Consensus 74 ~-~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G--------------------wglt~dg~~L~vSdgs~~l~~iDp~ 132 (243)
T 3mbr_X 74 R-DRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG--------------------WALTSDDSHLYMSDGTAVIRKLDPD 132 (243)
T ss_dssp T-TEEEEEESSSSEEEEEETTTTEEEEEEECSSCC--------------------CEEEECSSCEEEECSSSEEEEECTT
T ss_pred C-CEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc--------------------eEEeeCCCEEEEECCCCeEEEEeCC
Confidence 2 446666667999999999999999999865432 23345666676555 99999999
Q ss_pred CCc
Q psy2085 188 IKK 190 (358)
Q Consensus 188 tG~ 190 (358)
+.+
T Consensus 133 t~~ 135 (243)
T 3mbr_X 133 TLQ 135 (243)
T ss_dssp TCC
T ss_pred CCe
Confidence 877
No 221
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.18 E-value=0.0056 Score=57.41 Aligned_cols=125 Identities=10% Similarity=-0.002 Sum_probs=84.4
Q ss_pred cccccceeEEEEeeCCCCE--eEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEE
Q psy2085 30 NDIRRRIELIQDFEMPGVS--TSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSI 107 (358)
Q Consensus 30 ~~~~~rIeliqdfe~~~~v--~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i 107 (358)
+-.++..++++.|.|+... ..+.|+. ..|..+.+..++|+++|+.+....-.. +.+.+ ..-.|
T Consensus 37 ~~~~~~~~Vv~~~phd~~~ftqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-----------l~~~~--FgeGi 101 (268)
T 3nok_A 37 EPVRRVAHIIREYPHATNAFTQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-----------RLGNI--FAEGL 101 (268)
T ss_dssp CCEEEEEEEEEEEECCTTCCEEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-----------ECTTC--CEEEE
T ss_pred CccccceEEEEEEcCCCccccceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-----------CCCCc--ceeEE
Confidence 4456677999999988655 6888873 455555556678999999876432221 22211 11224
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec---ceEEE
Q psy2085 108 AINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD---DDQAW 184 (358)
Q Consensus 108 ~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD---~IKIW 184 (358)
++.. +.+....-.++.+-++|+.+.+.++++...... ..|+ +++..|+.+| .|.++
T Consensus 102 t~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eG------------------wGLt--~Dg~~L~vSdGs~~l~~i 160 (268)
T 3nok_A 102 ASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEG------------------WGLC--YWNGKLVRSDGGTMLTFH 160 (268)
T ss_dssp EECS-SCEEEEESSSCEEEEEETTTTEEEEEEECSSCC------------------CCEE--EETTEEEEECSSSEEEEE
T ss_pred EEeC-CEEEEEEccCCEEEEEECCcCcEEEEEeCCCce------------------eEEe--cCCCEEEEECCCCEEEEE
Confidence 4432 356666667999999999999999999864332 2344 5677777655 99999
Q ss_pred ECCCCc
Q psy2085 185 TKEIKK 190 (358)
Q Consensus 185 D~~tG~ 190 (358)
|..+++
T Consensus 161 Dp~T~~ 166 (268)
T 3nok_A 161 EPDGFA 166 (268)
T ss_dssp CTTTCC
T ss_pred cCCCCe
Confidence 999887
No 222
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.14 E-value=0.0086 Score=57.95 Aligned_cols=79 Identities=9% Similarity=0.047 Sum_probs=59.8
Q ss_pred CeeEEEEcCCCCEEEEEeC----------CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCC
Q psy2085 103 ELNSIAINPVHQLICVGTI----------EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEE 172 (358)
Q Consensus 103 ~In~i~~np~~~llasGs~----------DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~ 172 (358)
+...++++|+++.+..+.. .+.|.+.|+.+++.+.++.....+ ..|.|+|||
T Consensus 268 g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p------------------~~i~~s~Dg 329 (373)
T 2mad_H 268 GWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDV------------------DAISVAQDG 329 (373)
T ss_pred ceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCc------------------CeEEECCCC
Confidence 3556889999775554432 368999999999999999765444 779999999
Q ss_pred C-EEEEe---c-ceEEEECCCCcEE----ecCCCCC
Q psy2085 173 E-EEESS---D-DDQAWTKEIKKTY----NLGPAPK 199 (358)
Q Consensus 173 ~-~llSa---D-~IKIWD~~tG~~y----~lgpap~ 199 (358)
+ .++++ + .|-|||..+++.- .+|..|.
T Consensus 330 ~~~l~v~~~~~~~V~ViD~~t~~vv~~i~~vG~~P~ 365 (373)
T 2mad_H 330 GPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQ 365 (373)
T ss_pred CeEEEEEcCCCCeEEEEECCCCCEEeeecCCCCCCc
Confidence 9 66652 5 9999999999822 5677774
No 223
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.08 E-value=0.0072 Score=62.65 Aligned_cols=112 Identities=12% Similarity=0.083 Sum_probs=72.5
Q ss_pred CCEeEEEE-c-CCCCEEEEEE-----------------ecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeE
Q psy2085 46 GVSTSVRI-S-PDGQYVLSTG-----------------IYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNS 106 (358)
Q Consensus 46 ~~v~~v~~-S-pDG~~LlatG-----------------~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~ 106 (358)
.....+++ + |||+||++++ .|++.|.+.|..++...++-..+ +.-.-
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vg--------------g~pd~ 199 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVS--------------GNLDN 199 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEES--------------SCCCC
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeC--------------CCccc
Confidence 45778888 6 9999999886 45668999999865432221111 01123
Q ss_pred EEEcCCCCEEEEEeCCC--------------------------------------eEEEEeCCC--Cce-eEEEeCCCCc
Q psy2085 107 IAINPVHQLICVGTIEG--------------------------------------KVEAWDPRM--KVK-AGTLDCAFNC 145 (358)
Q Consensus 107 i~~np~~~llasGs~DG--------------------------------------tV~iWD~Rs--~~~-i~~L~~~~~~ 145 (358)
++++|++.++.+.+.+. .|.+-|+++ ++. ++.+..+.++
T Consensus 200 ~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~P 279 (595)
T 1fwx_A 200 CDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNP 279 (595)
T ss_dssp EEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSC
T ss_pred eEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCc
Confidence 55666666655555332 366666665 333 4455443333
Q ss_pred cccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCCC
Q psy2085 146 ISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEIK 189 (358)
Q Consensus 146 v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~tG 189 (358)
..+.|+|||++++.++ +|.++|..+.
T Consensus 280 ------------------hGv~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 280 ------------------HGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp ------------------CCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred ------------------eEEEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 7799999999998654 9999999864
No 224
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.08 E-value=0.004 Score=62.02 Aligned_cols=110 Identities=9% Similarity=-0.073 Sum_probs=75.4
Q ss_pred CCCCEEEEEEecC----CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe----------
Q psy2085 55 PDGQYVLSTGIYK----PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT---------- 120 (358)
Q Consensus 55 pDG~~LlatG~~d----~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs---------- 120 (358)
||++++.++.... ++|.++|+.++... ..+ -... .. .++++|+++.|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv--~~I--------~vG~---~P--gia~SpDgk~lyVan~~~~~~~~G~ 146 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRIL--GMT--------DGGF---LP--HPVAAEDGSFFAQASTVFERIARGK 146 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEE--EEE--------EECS---SC--EEEECTTSSCEEEEEEEEEETTEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEE--EEE--------ECCC---CC--ceEECCCCCEEEEEeccccccccCC
Confidence 5888877775433 69999999876432 111 1111 23 799999998665554
Q ss_pred CCCeEEEEeCCCCceeEEEeCCCC-ccccccCCCccccccCCCceeeEEcCCCCEEEE---e-c-ceEEEECCCCc
Q psy2085 121 IEGKVEAWDPRMKVKAGTLDCAFN-CISNERDTEEKEGKASSDESSEEEEEEEEEEES---S-D-DDQAWTKEIKK 190 (358)
Q Consensus 121 ~DGtV~iWD~Rs~~~i~~L~~~~~-~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS---a-D-~IKIWD~~tG~ 190 (358)
.+++|.++|+.+++.++++..... .... ...|..+.|+|||++|+. . + .|-+.|..+++
T Consensus 147 ~~~~VsviD~~t~~vv~~I~v~g~~r~~~-----------g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~k 211 (426)
T 3c75_H 147 RTDYVEVFDPVTFLPIADIELPDAPRFLV-----------GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKT 211 (426)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCCCCCB-----------SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTE
T ss_pred CCCEEEEEECCCCcEEEEEECCCcccccc-----------CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCe
Confidence 478999999999999998874310 0000 011267999999998874 2 3 89999999988
No 225
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.01 E-value=0.045 Score=48.69 Aligned_cols=120 Identities=8% Similarity=0.026 Sum_probs=80.3
Q ss_pred EEEeeCC---CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCE
Q psy2085 39 IQDFEMP---GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQL 115 (358)
Q Consensus 39 iqdfe~~---~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~l 115 (358)
++.+..| ....++.++++|+.. ++...++.|.+||.. .... .. .+ +.....+.+|++.+++.+
T Consensus 10 ~~~~~~~~~~~~p~~i~~d~~g~l~-v~~~~~~~v~~~~~~-~~~~--~~---------~~-~~~~~~~~~i~~~~~g~l 75 (300)
T 2qc5_A 10 LEEFNLSIPDSGPYGITSSEDGKVW-FTQHKANKISSLDQS-GRIK--EF---------EV-PTPDAKVMCLIVSSLGDI 75 (300)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEE-EEETTTTEEEEECTT-SCEE--EE---------EC-SSTTCCEEEEEECTTSCE
T ss_pred EEEEecCCCCCCcceeeECCCCCEE-EEcCCCCeEEEECCC-CceE--EE---------EC-CCCCCcceeEEECCCCCE
Confidence 4555544 367899999999855 444457899999977 3221 10 01 111146889999999999
Q ss_pred EEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 116 ICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 116 lasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
+++...++.|..||+. ++. ..+..+... ..|..|.++++|...++. + .|..||.. |+
T Consensus 76 ~v~~~~~~~v~~~d~~-g~~-~~~~~~~~~---------------~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~ 135 (300)
T 2qc5_A 76 WFTENGANKIGKLSKK-GGF-TEYPLPQPD---------------SGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GT 135 (300)
T ss_dssp EEEETTTTEEEEECTT-SCE-EEEECSSTT---------------CCEEEEEECSTTCEEEEETTTTEEEEECTT-SC
T ss_pred EEEecCCCeEEEECCC-CCe-EEecCCCCC---------------CCCccceECCCCCEEEEccCCCeEEEECCC-CC
Confidence 8887778999999987 543 333322110 011789999999877763 4 88889887 65
No 226
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.95 E-value=0.076 Score=47.20 Aligned_cols=113 Identities=9% Similarity=-0.067 Sum_probs=75.9
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
..+.++.++++|...+ +....+.|.+||.. .... . + .+ +.....++++++.|++.++++...++.|
T Consensus 62 ~~~~~i~~~~~g~l~v-~~~~~~~v~~~d~~-g~~~--~--------~-~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i 127 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWF-TENGANKIGKLSKK-GGFT--E--------Y-PL-PQPDSGPYGITEGLNGDIWFTQLNGDRI 127 (300)
T ss_dssp CCEEEEEECTTSCEEE-EETTTTEEEEECTT-SCEE--E--------E-EC-SSTTCCEEEEEECSTTCEEEEETTTTEE
T ss_pred CcceeEEECCCCCEEE-EecCCCeEEEECCC-CCeE--E--------e-cC-CCCCCCCccceECCCCCEEEEccCCCeE
Confidence 5688999999998554 44446789999976 3221 1 0 01 1111468899999999999888878999
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
..||+. ++.. .+..+... ..|..|.++++|+..++. + .|.+||. +|+
T Consensus 128 ~~~~~~-g~~~-~~~~~~~~---------------~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~ 177 (300)
T 2qc5_A 128 GKLTAD-GTIY-EYDLPNKG---------------SYPAFITLGSDNALWFTENQNNSIGRITN-TGK 177 (300)
T ss_dssp EEECTT-SCEE-EEECSSTT---------------CCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred EEECCC-CCEE-EccCCCCC---------------CCceeEEECCCCCEEEEecCCCeEEEECC-CCc
Confidence 999987 5443 23221110 012789999999866653 4 8889998 565
No 227
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.91 E-value=0.0075 Score=56.84 Aligned_cols=111 Identities=8% Similarity=0.029 Sum_probs=66.9
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCC---CceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDN---LSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE 122 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~---lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D 122 (358)
..++.|+|||||++|..+.....+|..++... ..+. .+..... +..+.. .+..+.+++.+++.++++...+
T Consensus 195 ~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~---~~~~g~--~g~pdgia~d~~G~l~va~~~~ 268 (343)
T 2qe8_A 195 LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLT-DAELGSK---IERYSE--KPICDGISIDKDHNIYVGDLAH 268 (343)
T ss_dssp CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCC-HHHHHTT---CEEEEE--CCSCSCEEECTTCCEEEEEGGG
T ss_pred cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCC-hhhhhcc---eEeccc--CCCCceEEECCCCCEEEEccCC
Confidence 35799999999998877655444555555321 1110 0000000 011111 0345779999999999999999
Q ss_pred CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe
Q psy2085 123 GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS 178 (358)
Q Consensus 123 GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa 178 (358)
+.|.+||+.+++.......+ .. ..|..|+|.+++.+++++
T Consensus 269 ~~V~~~d~~~G~~~~~~~~~-~~---------------~~p~~va~~~~g~l~v~~ 308 (343)
T 2qe8_A 269 SAIGVITSADRAYKLLVTDE-KL---------------SWTDSFNFGSDGYLYFDC 308 (343)
T ss_dssp TEEEEEETTTTEEEEEEECG-GG---------------SCEEEEEECTTSCEEEEE
T ss_pred CeEEEEECCCCCEEEEEECC-ce---------------ecCCeeEECCCCcEEEEe
Confidence 99999999666532222221 00 112789999998877763
No 228
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.88 E-value=0.0029 Score=61.68 Aligned_cols=116 Identities=5% Similarity=-0.232 Sum_probs=73.9
Q ss_pred EeEEEEcC-CCCEEEEEEecCC----eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe--
Q psy2085 48 STSVRISP-DGQYVLSTGIYKP----RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT-- 120 (358)
Q Consensus 48 v~~v~~Sp-DG~~LlatG~~d~----~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs-- 120 (358)
+.|..+.| +...+.++....+ +|.++|+.++... ..+ .. .+ .+ .+.++|++..+..+.
T Consensus 21 ~~~~~~~~~~~~~~yV~~~~~~~~~d~vsvID~~t~~v~--~~i--------~v--G~-~P--~i~~spDg~~lyVan~~ 85 (368)
T 1mda_H 21 SSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTL--GHS--------LG--AF-LS--LAVAGHSGSDFALASTS 85 (368)
T ss_dssp CCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEE--EEE--------EE--CT-TC--EEEECTTSSCEEEEEEE
T ss_pred cccccCCCCCCCeEEEECCccCCccceEEEEECCCCeEE--EEE--------eC--CC-CC--ceEECCCCCEEEEEccc
Confidence 34444443 4456666655444 7889998875432 111 11 11 23 799999998776665
Q ss_pred --------CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe---c--ceEE--EE
Q psy2085 121 --------IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS---D--DDQA--WT 185 (358)
Q Consensus 121 --------~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa---D--~IKI--WD 185 (358)
.+++|.+||+.+++.++++..+...- +. ....|..+.|+|||++|+.+ + .|.+ ||
T Consensus 86 ~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~---~~-------~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD 155 (368)
T 1mda_H 86 FARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR---FS-------VGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPG 155 (368)
T ss_dssp ETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS---CC-------BSCCTTSEEECTTSSCEEEEECSSSCEEEEEETT
T ss_pred ccccccCCCCCEEEEEECCCCCEEEEEECCCccc---cc-------cCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEc
Confidence 37899999999999999997541100 00 00112679999999988742 3 6777 99
Q ss_pred CCC
Q psy2085 186 KEI 188 (358)
Q Consensus 186 ~~t 188 (358)
..+
T Consensus 156 ~~t 158 (368)
T 1mda_H 156 ASD 158 (368)
T ss_dssp TEE
T ss_pred hhh
Confidence 865
No 229
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.83 E-value=0.018 Score=56.28 Aligned_cols=132 Identities=7% Similarity=-0.114 Sum_probs=76.8
Q ss_pred EEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeec-cCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe-CCCeEEE
Q psy2085 50 SVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCF-DSEVVTFEILSDDYSSELNSIAINPVHQLICVGT-IEGKVEA 127 (358)
Q Consensus 50 ~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~-d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs-~DGtV~i 127 (358)
.++|+|++.+|.++....++|++|+.......+..+. .....+-....... ...+.|+++|++.++++-+ .++.|+.
T Consensus 271 ~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~-~~P~gia~d~dG~lyvad~~~~~~I~~ 349 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALF-AQPNGMTVDEDGNFYIVDGFKGYCLRK 349 (409)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBC-SSEEEEEECTTCCEEEEETTTTCEEEE
T ss_pred cEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEe-CCCeEEEEeCCCCEEEEeCCCCCEEEE
Confidence 9999997667777777788999999764311111110 00000000000000 3478999999999999988 8999999
Q ss_pred EeCCCCceeEEEeCCCCccccccCCCccc-cccCCCceeeEEcCCCCEEEE-e-c-ceEEEEC
Q psy2085 128 WDPRMKVKAGTLDCAFNCISNERDTEEKE-GKASSDESSEEEEEEEEEEES-S-D-DDQAWTK 186 (358)
Q Consensus 128 WD~Rs~~~i~~L~~~~~~v~~~~~i~gl~-GtRs~~P~sI~fs~d~~~llS-a-D-~IKIWD~ 186 (358)
||+.++. +.++.++...- .+ .+|.. ..+-..|..|+++++|..+++ . . .|+.+++
T Consensus 350 ~~~~~G~-v~~~~g~~~~~--g~-~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 350 LDILDGY-VSTVAGQVDVA--SQ-IDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EETTTTE-EEEEEECTTCB--SC-CCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EECCCCE-EEEEeCCCCCC--Cc-CCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 9987775 44444331100 00 01100 002344689999999765555 2 2 6766554
No 230
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.79 E-value=0.00072 Score=65.18 Aligned_cols=103 Identities=5% Similarity=-0.078 Sum_probs=53.9
Q ss_pred CCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy2085 56 DGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK 135 (358)
Q Consensus 56 DG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~ 135 (358)
+|..| .+|+.++.|.+||..+....+.... +.+.+..+.+++.++++++.||.|.+||+.+++.
T Consensus 8 ~~~~v-~~gs~dg~v~a~d~~tG~~~W~~~~---------------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~ 71 (369)
T 2hz6_A 8 PETLL-FVSTLDGSLHAVSKRTGSIKWTLKE---------------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEG 71 (369)
T ss_dssp CTTEE-EEEETTSEEEEEETTTCCEEEEEEC---------------CCSCCCC-----CCEEECTTTCCEEEC-----CC
T ss_pred eCCEE-EEEcCCCEEEEEECCCCCEEEEecC---------------CCceecceEcCCCEEEEeCCCCEEEEEECCCCce
Confidence 45555 4567899999999988766554332 1233334446677888889999999999999987
Q ss_pred eEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE--Eec-ceEEEECCCCc
Q psy2085 136 AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE--SSD-DDQAWTKEIKK 190 (358)
Q Consensus 136 i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll--SaD-~IKIWD~~tG~ 190 (358)
+-.+..+...... .+..+..+ ..|+ +.| .|..||..+|+
T Consensus 72 ~w~~~~~~~~~~~---------------~sp~~~~~-~~v~~g~~dg~v~a~D~~tG~ 113 (369)
T 2hz6_A 72 LTKLPFTIPELVQ---------------ASPCRSSD-GILYMGKKQDIWYVIDLLTGE 113 (369)
T ss_dssp SEECSCCHHHHHT---------------TCSCC------CCCCEEEEEEEEECCC---
T ss_pred eeeeeccCccccc---------------cCceEecC-CEEEEEeCCCEEEEEECCCCc
Confidence 7666533211000 00111122 3344 357 89999999887
No 231
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.78 E-value=0.0045 Score=60.37 Aligned_cols=82 Identities=4% Similarity=-0.072 Sum_probs=59.9
Q ss_pred EEEEcCCCCEEEEEEe-c-------CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEe
Q psy2085 50 SVRISPDGQYVLSTGI-Y-------KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGT 120 (358)
Q Consensus 50 ~v~~SpDG~~LlatG~-~-------d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs 120 (358)
.+.|+|||++++++.. . .+.+.|+|+.++... +.+. . . .....|+|+|++. ++++..
T Consensus 268 ~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv--~~i~-----v---g----~~p~gi~~s~Dg~~l~va~~ 333 (368)
T 1mda_H 268 MVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTS--GPIS-----N---G----HDSDAIIAAQDGASDNYANS 333 (368)
T ss_dssp CEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEE--ECCE-----E---E----EEECEEEECCSSSCEEEEEE
T ss_pred eeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEE--EEEE-----C---C----CCcceEEECCCCCEEEEEcc
Confidence 3789999999887643 2 235679999875431 1110 0 0 2367899999987 677767
Q ss_pred -CCCeEEEEeCCCCceeEEEeCCCCc
Q psy2085 121 -IEGKVEAWDPRMKVKAGTLDCAFNC 145 (358)
Q Consensus 121 -~DGtV~iWD~Rs~~~i~~L~~~~~~ 145 (358)
.+++|.++|+.+++.+.++..+..+
T Consensus 334 ~~~~~VsVID~~t~kvv~~I~vg~~P 359 (368)
T 1mda_H 334 AGTEVLDIYDAASDQDQSSVELDKGP 359 (368)
T ss_dssp TTTTEEEEEESSSCEEEEECCCCSCC
T ss_pred CCCCeEEEEECCCCcEEEEEECCCCC
Confidence 5999999999999999999876554
No 232
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.67 E-value=0.012 Score=61.65 Aligned_cols=122 Identities=13% Similarity=0.084 Sum_probs=76.4
Q ss_pred EEEcCCCC--EEEEEEecCCeEEEEEcCCCceeeeeeccCce-EE---------E----------EEeecCCCCC--eeE
Q psy2085 51 VRISPDGQ--YVLSTGIYKPRVRCYETDNLSMKFERCFDSEV-VT---------F----------EILSDDYSSE--LNS 106 (358)
Q Consensus 51 v~~SpDG~--~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~-v~---------f----------~~LS~D~s~~--In~ 106 (358)
+....||+ .++..++.++.|.++|..+..+.......... .. + ....|...+. -..
T Consensus 318 ~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~ 397 (677)
T 1kb0_A 318 ADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHP 397 (677)
T ss_dssp EEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSC
T ss_pred EecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCC
Confidence 34445884 34567888999999999887665433221100 00 0 0111111111 136
Q ss_pred EEEcCCCCEEEEEeC-------------------------------------------CCeEEEEeCCCCceeEEEeCCC
Q psy2085 107 IAINPVHQLICVGTI-------------------------------------------EGKVEAWDPRMKVKAGTLDCAF 143 (358)
Q Consensus 107 i~~np~~~llasGs~-------------------------------------------DGtV~iWD~Rs~~~i~~L~~~~ 143 (358)
++++|+.+++.+++. .|+|..||+.+++.+-.+....
T Consensus 398 ~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~ 477 (677)
T 1kb0_A 398 MSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS 477 (677)
T ss_dssp CEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESS
T ss_pred ceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCC
Confidence 789999888877643 2889999999999887665432
Q ss_pred CccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 144 NCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 144 ~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.. ....+...+..|+. .| .+++||..+|+
T Consensus 478 ~~------------------~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~ 509 (677)
T 1kb0_A 478 PW------------------NGGTLTTAGNVVFQGTADGRLVAYHAATGE 509 (677)
T ss_dssp SC------------------CCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred CC------------------cCcceEeCCCEEEEECCCCcEEEEECCCCc
Confidence 21 23445566677764 56 99999999999
No 233
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.62 E-value=0.014 Score=61.59 Aligned_cols=112 Identities=11% Similarity=-0.042 Sum_probs=70.3
Q ss_pred CEeEEEEc-CCCCEEEEEEecC----CeEEEEEcCCC-ceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe
Q psy2085 47 VSTSVRIS-PDGQYVLSTGIYK----PRVRCYETDNL-SMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT 120 (358)
Q Consensus 47 ~v~~v~~S-pDG~~LlatG~~d----~~IrvwDl~~l-slk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs 120 (358)
.+...+|| |||++|+-+.+.. .+|+++|+.+. ... . ..+. .....++|+|+++.|+...
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l----~--~~~~---------~~~~~~~WspDg~~l~y~~ 239 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI----A--DKVS---------GTNGEIVWGPDHTSLFYVT 239 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC----C--CCEE---------EECSCCEECSSTTEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC----C--cccc---------CceeeEEEecCCCEEEEEE
Confidence 57789999 9999887554333 35999999865 311 0 0111 1134678999998777766
Q ss_pred CC-----CeEEEEeCCCCcee--EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-Ee----c-ceEEEECC
Q psy2085 121 IE-----GKVEAWDPRMKVKA--GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-SS----D-DDQAWTKE 187 (358)
Q Consensus 121 ~D-----GtV~iWD~Rs~~~i--~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-Sa----D-~IKIWD~~ 187 (358)
.| ..|.+|++.++... ..+........ .++.|+|||++|+ ++ . .|.++|+.
T Consensus 240 ~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~----------------~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 240 KDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFS----------------AFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp ECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCE----------------EEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred ECCCCCCCEEEEEECCCCchhcEEEEecCCCceE----------------EEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 55 25778888776432 22222111100 4678999999877 22 2 77888887
Q ss_pred CC
Q psy2085 188 IK 189 (358)
Q Consensus 188 tG 189 (358)
++
T Consensus 304 ~~ 305 (751)
T 2xe4_A 304 KG 305 (751)
T ss_dssp SC
T ss_pred CC
Confidence 65
No 234
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.53 E-value=0.015 Score=57.97 Aligned_cols=78 Identities=10% Similarity=0.072 Sum_probs=58.7
Q ss_pred eeEEEEcCCCCEEEEEeC----------CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCC
Q psy2085 104 LNSIAINPVHQLICVGTI----------EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEE 173 (358)
Q Consensus 104 In~i~~np~~~llasGs~----------DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~ 173 (358)
...++++|+++.+..... +++|.+.|+.+++.+.++.....+ ..|.|+|||+
T Consensus 321 ~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P------------------~gia~spDg~ 382 (426)
T 3c75_H 321 WQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEI------------------DSINVSQDAE 382 (426)
T ss_dssp SSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEE------------------CEEEECCSSS
T ss_pred ceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCc------------------CeEEEccCCC
Confidence 345789999774443321 358999999999999999865444 7799999999
Q ss_pred -EEEEe---c-ceEEEECCCCc---EE-ecCCCCC
Q psy2085 174 -EEESS---D-DDQAWTKEIKK---TY-NLGPAPK 199 (358)
Q Consensus 174 -~llSa---D-~IKIWD~~tG~---~y-~lgpap~ 199 (358)
+++++ + .|-|+|..+++ +. .+|..|.
T Consensus 383 ~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG~~P~ 417 (426)
T 3c75_H 383 PLLYALSAGTQTLHIYDAATGEELRSVDQLGRGPQ 417 (426)
T ss_dssp CEEEEEETTTTEEEEEETTTCCEEEEECCCSSSCC
T ss_pred EEEEEEcCCCCeEEEEECCCCCEEEEecCCCCCCc
Confidence 77762 5 99999999998 33 4666664
No 235
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.48 E-value=0.039 Score=51.47 Aligned_cols=121 Identities=7% Similarity=-0.033 Sum_probs=76.7
Q ss_pred eEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCC--CCCeeEEEEcCCCC
Q psy2085 37 ELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDY--SSELNSIAINPVHQ 114 (358)
Q Consensus 37 eliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~--s~~In~i~~np~~~ 114 (358)
+++..|.++ .-....+++||+.|+++- ..++|.++|..++... +... ...+. -..+|.+.|. ++.
T Consensus 97 ~v~~~i~~g-~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~--~~I~--------Vg~~~~p~~~~nele~~-dg~ 163 (266)
T 2iwa_A 97 SNIKNFTHQ-MKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLI--KKHN--------VKYNGHRVIRLNELEYI-NGE 163 (266)
T ss_dssp EEEEEEECC-SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEE--EEEE--------CEETTEECCCEEEEEEE-TTE
T ss_pred cEEEEEECC-CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEE--EEEE--------ECCCCcccccceeEEEE-CCE
Confidence 556666654 112355888999888775 5789999999875421 1111 00000 0347888888 677
Q ss_pred EEEEEeCCCeEEEEeCCCCceeEEEeCCCC-cc--ccccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 115 LICVGTIEGKVEAWDPRMKVKAGTLDCAFN-CI--SNERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 115 llasGs~DGtV~iWD~Rs~~~i~~L~~~~~-~v--~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
+.+....++.|.+-|+.+++.++.++...- +- .... . ....|+.|+|+|+++.++.
T Consensus 164 lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~-~------~~~v~nGIa~~~~~~~lfV 222 (266)
T 2iwa_A 164 VWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGF-R------DIDVLNGIAWDQENKRIFV 222 (266)
T ss_dssp EEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTC-T------TCCCEEEEEEETTTTEEEE
T ss_pred EEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccc-c------ccCceEEEEEcCCCCEEEE
Confidence 777776789999999999999999986310 00 0000 0 0011278999999987764
No 236
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.47 E-value=0.055 Score=56.23 Aligned_cols=114 Identities=10% Similarity=0.018 Sum_probs=69.9
Q ss_pred CCCEeEEEEcCCCCEEEEEEe---cCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEe
Q psy2085 45 PGVSTSVRISPDGQYVLSTGI---YKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGT 120 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~---~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs 120 (358)
+.....+.|||||++|+.+.. ....|.++|+.+....+.+ +.+.. ..+... +++++. ++++..
T Consensus 233 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~-----------l~~~~-~~~~~~-~~~~g~~l~~~t~ 299 (693)
T 3iuj_A 233 HHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLT-----------VQGDL-DADVSL-VDNKGSTLYLLTN 299 (693)
T ss_dssp CCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEE-----------EECSS-SSCEEE-EEEETTEEEEEEC
T ss_pred CeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEE-----------EeCCC-CceEEE-EeccCCEEEEEEC
Confidence 445778999999999976643 3358999998754221111 11111 222333 555555 444444
Q ss_pred CC---CeEEEEeCCCCce--eEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE---ec---ceEEEECCCC
Q psy2085 121 IE---GKVEAWDPRMKVK--AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES---SD---DDQAWTKEIK 189 (358)
Q Consensus 121 ~D---GtV~iWD~Rs~~~--i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS---aD---~IKIWD~~tG 189 (358)
.+ +.|..||+.++.+ ...|..+...+ +.|+++++.|+. .| .|++||...+
T Consensus 300 ~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-------------------~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 300 RDAPNRRLVTVDAANPGPAHWRDLIPERQQV-------------------LTVHSGSGYLFAEYMVDATARVEQFDYEGK 360 (693)
T ss_dssp TTCTTCEEEEEETTSCCGGGCEEEECCCSSC-------------------EEEEEETTEEEEEEEETTEEEEEEECTTSC
T ss_pred CCCCCCEEEEEeCCCCCccccEEEecCCCCE-------------------EEEEEECCEEEEEEEECCeeEEEEEECCCC
Confidence 43 6899999987654 34554443321 389999988773 23 7899998755
Q ss_pred c
Q psy2085 190 K 190 (358)
Q Consensus 190 ~ 190 (358)
.
T Consensus 361 ~ 361 (693)
T 3iuj_A 361 R 361 (693)
T ss_dssp E
T ss_pred e
Confidence 4
No 237
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.39 E-value=0.027 Score=52.56 Aligned_cols=123 Identities=15% Similarity=0.146 Sum_probs=73.7
Q ss_pred eEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC-CCeeEEEEcCCCCE
Q psy2085 37 ELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS-SELNSIAINPVHQL 115 (358)
Q Consensus 37 eliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s-~~In~i~~np~~~l 115 (358)
+++..|..++ ....+++||+.|+.|- ...+|.++|..++... +... | -..+.. ..+|-+.+. ++.+
T Consensus 118 ~~~~ti~~~~--eG~glt~dg~~L~~Sd-Gs~~i~~iDp~T~~v~--~~I~---V----~~~g~~~~~lNELe~~-~G~l 184 (262)
T 3nol_A 118 RQVRSFNYDG--EGWGLTHNDQYLIMSD-GTPVLRFLDPESLTPV--RTIT---V----TAHGEELPELNELEWV-DGEI 184 (262)
T ss_dssp CEEEEEECSS--CCCCEEECSSCEEECC-SSSEEEEECTTTCSEE--EEEE---C----EETTEECCCEEEEEEE-TTEE
T ss_pred cEEEEEECCC--CceEEecCCCEEEEEC-CCCeEEEEcCCCCeEE--EEEE---e----ccCCccccccceeEEE-CCEE
Confidence 5566666554 3345557888776654 3678999988765432 1111 0 000000 457778886 6777
Q ss_pred EEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 116 ICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 116 lasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
.|..-.+..|.+-|+++++.+++++...-.-....... ....|+.|+|+|+++.|+-
T Consensus 185 yan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~-----~~~vlNGIA~dp~~~~lfV 241 (262)
T 3nol_A 185 FANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPS-----PIDVLNGIAWDKEHHRLFV 241 (262)
T ss_dssp EEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCS-----SCCCEEEEEEETTTTEEEE
T ss_pred EEEEccCCeEEEEECCCCcEEEEEECCcCccccccccC-----cCCceEEEEEcCCCCEEEE
Confidence 77766788999999999999999986421000000000 0011288999999887764
No 238
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.30 E-value=0.016 Score=60.66 Aligned_cols=79 Identities=13% Similarity=0.155 Sum_probs=55.7
Q ss_pred CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccc
Q psy2085 68 PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCIS 147 (358)
Q Consensus 68 ~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~ 147 (358)
+.|..||+.+....+..... ..++...+...++++.+|+.||.|++||.++++.+-.+..+.....
T Consensus 455 g~l~A~D~~tG~~~W~~~~~--------------~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~ 520 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYV--------------TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMA 520 (689)
T ss_dssp EEEEEEETTTTEEEEEEEES--------------SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred eeEEEEECCCCCeEeEccCC--------------CCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCccc
Confidence 67899999877665543322 1223335566788999999999999999999999988876543321
Q ss_pred cccCCCccccccCCCceeeEEcCCCCEEE
Q psy2085 148 NERDTEEKEGKASSDESSEEEEEEEEEEE 176 (358)
Q Consensus 148 ~~~~i~gl~GtRs~~P~sI~fs~d~~~ll 176 (358)
.-+.|..+|++.+
T Consensus 521 ----------------~p~ty~~~G~qyv 533 (689)
T 1yiq_A 521 ----------------APVTYSVDGEQYV 533 (689)
T ss_dssp ----------------CCEEEEETTEEEE
T ss_pred ----------------CceEEEECCEEEE
Confidence 3367777776544
No 239
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.05 E-value=0.43 Score=42.55 Aligned_cols=130 Identities=9% Similarity=0.018 Sum_probs=73.3
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC-CEEEEEeCCCeE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH-QLICVGTIEGKV 125 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~-~llasGs~DGtV 125 (358)
....++++|++.+|..+....++|.++++....... ++..+. ...+.|+++|++ .++++....+.|
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~------------~~~~~~-~~p~~ia~d~~~~~lyv~d~~~~~I 103 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTT------------IIRQDL-GSPEGIALDHLGRTIFWTDSQLDRI 103 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEE------------EECTTC-CCEEEEEEETTTTEEEEEETTTTEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEE------------EEECCC-CCccEEEEEecCCeEEEEECCCCEE
Confidence 357899999988888887777899999987532110 111111 345777777754 455555566777
Q ss_pred EEEeCCCCceeEEE----eCCC--------Ccc-ccccC--CCcc-----ccc--------cCCCceeeEEcCCCCEEEE
Q psy2085 126 EAWDPRMKVKAGTL----DCAF--------NCI-SNERD--TEEK-----EGK--------ASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L----~~~~--------~~v-~~~~~--i~gl-----~Gt--------Rs~~P~sI~fs~d~~~llS 177 (358)
.++|+........+ ..+. ..+ ..... ...+ .|+ ....|..|+|++++..|+-
T Consensus 104 ~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv 183 (267)
T 1npe_A 104 EVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCW 183 (267)
T ss_dssp EEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEE
T ss_pred EEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEE
Confidence 77776532211000 1111 100 00000 0000 122 1134589999999888875
Q ss_pred ec----ceEEEECCCC
Q psy2085 178 SD----DDQAWTKEIK 189 (358)
Q Consensus 178 aD----~IKIWD~~tG 189 (358)
+| .|.++|...+
T Consensus 184 ~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 184 VDAGTHRAECLNPAQP 199 (267)
T ss_dssp EETTTTEEEEEETTEE
T ss_pred EECCCCEEEEEecCCC
Confidence 44 8889998754
No 240
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.99 E-value=0.03 Score=58.52 Aligned_cols=79 Identities=10% Similarity=0.098 Sum_probs=56.2
Q ss_pred CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccc
Q psy2085 68 PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCIS 147 (358)
Q Consensus 68 ~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~ 147 (358)
+.|..||+.+....+..... ..++...+...+.++.+|+.||.|.+||.++++.+..+..+.....
T Consensus 457 g~l~A~D~~tG~~~W~~~~~--------------~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~ 522 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHV--------------SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVA 522 (677)
T ss_dssp EEEEEEETTTTEEEEEEEES--------------SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred cEEEEEeCCCCcEEeecCCC--------------CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCccc
Confidence 67999999877655543322 1234445667788999999999999999999999999986543321
Q ss_pred cccCCCccccccCCCceeeEEcCCCCEEE
Q psy2085 148 NERDTEEKEGKASSDESSEEEEEEEEEEE 176 (358)
Q Consensus 148 ~~~~i~gl~GtRs~~P~sI~fs~d~~~ll 176 (358)
.-+.|..+|+..+
T Consensus 523 ----------------~p~~y~~~G~~~v 535 (677)
T 1kb0_A 523 ----------------APSTYMVDGRQYV 535 (677)
T ss_dssp ----------------CCEEEEETTEEEE
T ss_pred ----------------CCEEEEeCCEEEE
Confidence 3367777776554
No 241
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.88 E-value=0.099 Score=48.90 Aligned_cols=122 Identities=8% Similarity=-0.033 Sum_probs=74.5
Q ss_pred eeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecC-CCCCeeEEEEcCCCC
Q psy2085 36 IELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDD-YSSELNSIAINPVHQ 114 (358)
Q Consensus 36 Ieliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D-~s~~In~i~~np~~~ 114 (358)
.+++..|..++.- ..+++||+.|+.|- ..++|.++|..++... +.... -... --..+|-+.|. ++.
T Consensus 126 l~~~~ti~~~~eG--wGLt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~--~~I~V-------~~~g~~v~~lNeLe~~-dG~ 192 (268)
T 3nok_A 126 PQRERTTRYSGEG--WGLCYWNGKLVRSD-GGTMLTFHEPDGFALV--GAVQV-------KLRGQPVELINELECA-NGV 192 (268)
T ss_dssp TEEEEEEECSSCC--CCEEEETTEEEEEC-SSSEEEEECTTTCCEE--EEEEC-------EETTEECCCEEEEEEE-TTE
T ss_pred CcEEEEEeCCCce--eEEecCCCEEEEEC-CCCEEEEEcCCCCeEE--EEEEe-------CCCCcccccccccEEe-CCE
Confidence 3566666655432 34457888887764 4789999998875432 21110 0000 00356888887 677
Q ss_pred EEEEEeCCCeEEEEeCCCCceeEEEeCCCC-c-ccc-ccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 115 LICVGTIEGKVEAWDPRMKVKAGTLDCAFN-C-ISN-ERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 115 llasGs~DGtV~iWD~Rs~~~i~~L~~~~~-~-v~~-~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
++|..-.+..|.+-|+++++.+++++...- + ... ... ...-|+.|+|+|+++.|+-
T Consensus 193 lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~-------~~~vlNGIA~dp~~~rlfV 251 (268)
T 3nok_A 193 IYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTN-------PEAVLNGIAVEPGSGRIFM 251 (268)
T ss_dssp EEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCC-------TTCCEEEEEECTTTCCEEE
T ss_pred EEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccC-------cCCceEEEEEcCCCCEEEE
Confidence 887766788999999999999999986410 0 000 000 0011288999998776663
No 242
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.71 E-value=0.12 Score=53.93 Aligned_cols=51 Identities=18% Similarity=0.175 Sum_probs=37.0
Q ss_pred CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 122 EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+|+|..||+.+++.+-.+..+... ..-.+...+.+|+. .| .+++||.+||+
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~------------------~~g~~~tagglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIF------------------NGGTLSTAGNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSC------------------CCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred ceeEEEEECCCCCeEeEccCCCCc------------------cCccceECCCEEEEECCCCcEEEEECCCCc
Confidence 488999999999988776644322 22245556677764 57 99999999999
No 243
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.69 E-value=0.85 Score=41.75 Aligned_cols=87 Identities=13% Similarity=0.160 Sum_probs=58.9
Q ss_pred cceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC
Q psy2085 34 RRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH 113 (358)
Q Consensus 34 ~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~ 113 (358)
...+++..|.-+.....++|+|+|+ |+++....++|..||.... . ... +... ...+.|++.|++
T Consensus 20 ~~~~~~~~~p~~~~pegia~~~~g~-lyv~d~~~~~I~~~d~~g~-~--~~~----------~~~~--~~p~gia~~~dG 83 (306)
T 2p4o_A 20 APAKIITSFPVNTFLENLASAPDGT-IFVTNHEVGEIVSITPDGN-Q--QIH----------ATVE--GKVSGLAFTSNG 83 (306)
T ss_dssp CCEEEEEEECTTCCEEEEEECTTSC-EEEEETTTTEEEEECTTCC-E--EEE----------EECS--SEEEEEEECTTS
T ss_pred CCceEeEeCCCCCCcceEEECCCCC-EEEEeCCCCeEEEECCCCc-e--EEE----------EeCC--CCceeEEEcCCC
Confidence 4467888886556678999999998 5555556789999987642 1 110 1111 357899999999
Q ss_pred CEEEEEeC-CC-eEEEEeCCCCcee
Q psy2085 114 QLICVGTI-EG-KVEAWDPRMKVKA 136 (358)
Q Consensus 114 ~llasGs~-DG-tV~iWD~Rs~~~i 136 (358)
+++++... ++ .|-.+|+.+++..
T Consensus 84 ~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 84 DLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CEEEEEECTTSCEEEEEECTTSCEE
T ss_pred cEEEEeccCCcceEEEEcCCCCeEE
Confidence 98777644 33 4666787777643
No 244
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=95.67 E-value=0.099 Score=52.54 Aligned_cols=147 Identities=11% Similarity=0.164 Sum_probs=82.5
Q ss_pred eEEEEeeCC---CCEeEEEE--cCCCCEEEEEEe-----cCCeEEEEEcCCCceeeeeeccCceEEEE-Eee---cCC--
Q psy2085 37 ELIQDFEMP---GVSTSVRI--SPDGQYVLSTGI-----YKPRVRCYETDNLSMKFERCFDSEVVTFE-ILS---DDY-- 100 (358)
Q Consensus 37 eliqdfe~~---~~v~~v~~--SpDG~~LlatG~-----~d~~IrvwDl~~lslk~~r~~d~e~v~f~-~LS---~D~-- 100 (358)
++++.+... .....|+| +|||+++.+++. -+++|-+|.......+.....+-....+. .+. .++
T Consensus 239 k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~ 318 (462)
T 2ece_A 239 KRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKA 318 (462)
T ss_dssp EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTE
T ss_pred cEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccccccccccccc
Confidence 566677664 23456666 999999998887 78899888776533222111110000000 000 000
Q ss_pred -CCCeeEEEEcCCCCEEEEEeC-CCeEEEEeCCC---CceeEEEeCCCCccccccCCCcccccc-CCCceeeEEcCCCCE
Q psy2085 101 -SSELNSIAINPVHQLICVGTI-EGKVEAWDPRM---KVKAGTLDCAFNCISNERDTEEKEGKA-SSDESSEEEEEEEEE 174 (358)
Q Consensus 101 -s~~In~i~~np~~~llasGs~-DGtV~iWD~Rs---~~~i~~L~~~~~~v~~~~~i~gl~GtR-s~~P~sI~fs~d~~~ 174 (358)
......|.+||+++.|-++.. .+.|.++|+.. .+.++.+...... . .++-..|.+ ...|..++++|||++
T Consensus 319 ~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~-~---~~~~~~G~~~~ggPr~~~lSpDGk~ 394 (462)
T 2ece_A 319 VPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIF-H---RADHPAGHKLTGAPQMLEISRDGRR 394 (462)
T ss_dssp ECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTT-T---CBCCTTSCCCCSCCCCEEECTTSSE
T ss_pred CCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCee-c---cccccccccCCCCCCEEEEcCCCCE
Confidence 034678999999987665554 78999999752 3455666543110 0 000000000 012478999999999
Q ss_pred EEEec-ceEEEECC
Q psy2085 175 EESSD-DDQAWTKE 187 (358)
Q Consensus 175 llSaD-~IKIWD~~ 187 (358)
|+.+. -..-||.+
T Consensus 395 LyVaNsl~~~wd~Q 408 (462)
T 2ece_A 395 VYVTNSLYSTWDNQ 408 (462)
T ss_dssp EEEECCCCHHHHHH
T ss_pred EEEEcCCccccccc
Confidence 98655 44455554
No 245
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.65 E-value=0.49 Score=43.43 Aligned_cols=44 Identities=14% Similarity=0.093 Sum_probs=31.4
Q ss_pred eEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 37 ELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 37 eliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
++++....+.......++++|..|....-.++.+.+||..++.+
T Consensus 54 kv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 54 RILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTP 97 (243)
T ss_dssp CEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEE
T ss_pred CEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcE
Confidence 45566666766666666667777777666678999999987654
No 246
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.44 E-value=0.32 Score=44.81 Aligned_cols=113 Identities=10% Similarity=0.021 Sum_probs=68.4
Q ss_pred CEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEeC---
Q psy2085 47 VSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGTI--- 121 (358)
Q Consensus 47 ~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs~--- 121 (358)
....+++.| +|+.+ ++. ....|.++|..+...+..... .....+ ...|.|++.| ++.+.++-..
T Consensus 81 ~p~gi~~~~~~g~l~-v~d-~~~~i~~~d~~~g~~~~~~~~-~~~~~~--------~~p~~i~~d~~~G~l~v~d~~~~~ 149 (322)
T 2fp8_A 81 RTYDISYNLQNNQLY-IVD-CYYHLSVVGSEGGHATQLATS-VDGVPF--------KWLYAVTVDQRTGIVYFTDVSTLY 149 (322)
T ss_dssp CEEEEEEETTTTEEE-EEE-TTTEEEEECTTCEECEEEESE-ETTEEC--------SCEEEEEECTTTCCEEEEESCSSC
T ss_pred CCceEEEcCCCCcEE-EEE-CCCCEEEEeCCCCEEEEeccc-CCCCcc--------cccceEEEecCCCEEEEECCcccc
Confidence 468899998 77644 432 234588888664322111000 000000 3478999999 8988777533
Q ss_pred --------------CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEE
Q psy2085 122 --------------EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQA 183 (358)
Q Consensus 122 --------------DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKI 183 (358)
+|.|..||+.+++.......-..+ +.|+|+|+|+.|+-+| .|.+
T Consensus 150 ~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p------------------~gia~~~dg~~lyv~d~~~~~I~~ 211 (322)
T 2fp8_A 150 DDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVP------------------GGAEVSADSSFVLVAEFLSHQIVK 211 (322)
T ss_dssp CTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCC------------------CEEEECTTSSEEEEEEGGGTEEEE
T ss_pred cccccceehcccCCCceEEEEeCCCCEEEEeccCCccC------------------cceEECCCCCEEEEEeCCCCeEEE
Confidence 478999998777643222211111 6799999998766433 7888
Q ss_pred EECCC
Q psy2085 184 WTKEI 188 (358)
Q Consensus 184 WD~~t 188 (358)
+|..+
T Consensus 212 ~~~~~ 216 (322)
T 2fp8_A 212 YWLEG 216 (322)
T ss_dssp EESSS
T ss_pred EECCC
Confidence 88875
No 247
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=95.09 E-value=0.38 Score=47.19 Aligned_cols=112 Identities=8% Similarity=-0.074 Sum_probs=68.6
Q ss_pred CEeEEEEcCCCCEEEEEEecCC----eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEeC
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKP----RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGTI 121 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~----~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs~ 121 (358)
....|+|+++|++|+++....+ .+.+++... .....+ .+..+ ...+.++++| ++.++++-..
T Consensus 180 ~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g-~~~~~~-------~l~~~-----~~p~giavdp~~g~lyv~d~~ 246 (430)
T 3tc9_A 180 KVRTICWTHEADSMIITNDQNNNDRPNNYILTRES-GFKVIT-------ELTKG-----QNCNGAETHPINGELYFNSWN 246 (430)
T ss_dssp CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG-TSCSEE-------EEEEC-----SSCCCEEECTTTCCEEEEETT
T ss_pred CcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC-ceeeee-------eeccC-----CCceEEEEeCCCCEEEEEECC
Confidence 4678999999998877754322 233333321 111000 01111 3467899999 7788888778
Q ss_pred CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECC
Q psy2085 122 EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKE 187 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~ 187 (358)
++.|..+|+..+........... ..|..|+|+|+|++|+-+| .|..+|.+
T Consensus 247 ~~~V~~~~~~~~~~~~~~~~~~~----------------~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 247 AGQVFRYDFTTQETTPLFTIQDS----------------GWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp TTEEEEEETTTTEEEEEEECSSS----------------SCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCEEEEEECCCCcEEEEEEcCCC----------------CcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 89999999987654222221111 1127899999999666433 77777654
No 248
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=94.97 E-value=0.78 Score=40.80 Aligned_cols=111 Identities=14% Similarity=0.112 Sum_probs=70.9
Q ss_pred CEeEEEEcCCCCEEEEEEec--CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCC
Q psy2085 47 VSTSVRISPDGQYVLSTGIY--KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIEG 123 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~--d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~DG 123 (358)
..+.++++|++.+|..+... .++|.++++.....+. +...+. ...+.++++|+++ ++++-...+
T Consensus 123 ~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~------------~~~~~~-~~P~gia~d~~~~~lyv~d~~~~ 189 (267)
T 1npe_A 123 NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRI------------LAQDNL-GLPNGLTFDAFSSQLCWVDAGTH 189 (267)
T ss_dssp SEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEE------------EECTTC-SCEEEEEEETTTTEEEEEETTTT
T ss_pred CccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEE------------EEECCC-CCCcEEEEcCCCCEEEEEECCCC
Confidence 45899999987777666543 4688888876422110 011111 3568999999765 666667789
Q ss_pred eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCCCc
Q psy2085 124 KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEIKK 190 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~tG~ 190 (358)
.|.++|+........+.....+ ..|+.. +..|+-+| .|.++|..+|+
T Consensus 190 ~I~~~~~~g~~~~~~~~~~~~P------------------~gi~~d--~~~lyva~~~~~~v~~~d~~~g~ 240 (267)
T 1npe_A 190 RAECLNPAQPGRRKVLEGLQYP------------------FAVTSY--GKNLYYTDWKTNSVIAMDLAISK 240 (267)
T ss_dssp EEEEEETTEEEEEEEEECCCSE------------------EEEEEE--TTEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEEecCCCceEEEecCCCCc------------------eEEEEe--CCEEEEEECCCCeEEEEeCCCCC
Confidence 9999999765444444322222 456654 45555433 89999999887
No 249
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=94.87 E-value=0.57 Score=43.08 Aligned_cols=113 Identities=9% Similarity=0.002 Sum_probs=70.1
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC------
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI------ 121 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~------ 121 (358)
.+.|+++|||++|.++-+..++|.+|++...... ....+.-+ + + .+.|++.+++.+.++...
T Consensus 187 p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~-------~~~~~~~~-~---g-P~gi~~d~~G~l~va~~~~~~~~~ 254 (322)
T 2fp8_A 187 PGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKG-------TAEVLVKI-P---N-PGNIKRNADGHFWVSSSEELDGNM 254 (322)
T ss_dssp CCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTT-------CEEEEEEC-S---S-EEEEEECTTSCEEEEEEEETTSST
T ss_pred CcceEECCCCCEEEEEeCCCCeEEEEECCCCcCC-------ccceEEeC-C---C-CCCeEECCCCCEEEEecCcccccc
Confidence 3679999999988777666789999998752110 00001111 1 2 677899999998777654
Q ss_pred ----CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECC
Q psy2085 122 ----EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKE 187 (358)
Q Consensus 122 ----DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~ 187 (358)
.+.|..+|+ .++.+..+..+.... + ..|..+.+. ++.+.++ .. .|.++++.
T Consensus 255 ~~~~~~~v~~~d~-~G~~~~~~~~~~g~~---~----------~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 255 HGRVDPKGIKFDE-FGNILEVIPLPPPFA---G----------EHFEQIQEH-DGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp TSCEEEEEEEECT-TSCEEEEEECCTTTT---T----------SCCCEEEEE-TTEEEEECSSCSEEEEEEC-
T ss_pred cCCCccEEEEECC-CCCEEEEEECCCCCc---c----------ccceEEEEe-CCEEEEeecCCCceEEEecc
Confidence 578999998 477777776542210 0 001556663 5555555 23 77788875
No 250
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.63 E-value=0.41 Score=48.86 Aligned_cols=121 Identities=14% Similarity=-0.015 Sum_probs=71.3
Q ss_pred EEcCCCC--EEEEEEecCCeEEEEEcCCCceeeeeeccCce-------------E-----------EEEEeecCCCCC--
Q psy2085 52 RISPDGQ--YVLSTGIYKPRVRCYETDNLSMKFERCFDSEV-------------V-----------TFEILSDDYSSE-- 103 (358)
Q Consensus 52 ~~SpDG~--~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~-------------v-----------~f~~LS~D~s~~-- 103 (358)
...+||+ .++..++.++.+.++|..+..+.........+ + .-....|...++
T Consensus 308 ~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~ 387 (571)
T 2ad6_A 308 DQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHN 387 (571)
T ss_dssp EEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSC
T ss_pred ecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccC
Confidence 3345786 45566788899999999887665443322100 0 001111211111
Q ss_pred eeEEEEcCCCCEEEEEe-------------------------------------CCCeEEEEeCCCCceeEEEeCCCCcc
Q psy2085 104 LNSIAINPVHQLICVGT-------------------------------------IEGKVEAWDPRMKVKAGTLDCAFNCI 146 (358)
Q Consensus 104 In~i~~np~~~llasGs-------------------------------------~DGtV~iWD~Rs~~~i~~L~~~~~~v 146 (358)
-..++++|+.++|..++ .+|.|.+||+.+++.+-++......
T Consensus 388 w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~- 466 (571)
T 2ad6_A 388 QGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAA- 466 (571)
T ss_dssp SCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCC-
T ss_pred CCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCc-
Confidence 14578888877766553 3588999999999887666533221
Q ss_pred ccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 147 SNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 147 ~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
........+..|+. .| .|.+||.++|+
T Consensus 467 -----------------~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 467 -----------------WGGTLYTKGGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp -----------------CSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred -----------------cceeEEECCCEEEEEcCCCeEEEEECCCCC
Confidence 11112223445553 56 99999999999
No 251
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=93.94 E-value=0.66 Score=47.49 Aligned_cols=64 Identities=14% Similarity=0.122 Sum_probs=43.2
Q ss_pred CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCC
Q psy2085 67 KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFN 144 (358)
Q Consensus 67 d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~ 144 (358)
.+.|..||+.+....++..... + +..-.+...++++.+|+.||.+++||.++++.+-.+..+..
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~---------~-----~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g 528 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL---------P-----LWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSG 528 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS---------C-----CCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred cceEEEEECCCCCEEEEecCCC---------C-----CcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCC
Confidence 4678888888766555432211 1 11111222467888899999999999999999988876543
No 252
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.81 E-value=0.13 Score=53.19 Aligned_cols=106 Identities=17% Similarity=0.197 Sum_probs=70.3
Q ss_pred EEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeec-cCc-eEEEEEeecCCCCCeeEEEEcCCCCE
Q psy2085 38 LIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCF-DSE-VVTFEILSDDYSSELNSIAINPVHQL 115 (358)
Q Consensus 38 liqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~-d~e-~v~f~~LS~D~s~~In~i~~np~~~l 115 (358)
++....-|..-..|.++|||+|++++|--+|+|.|+|+..+.--|...+ +.+ ++-..+ ..+ -+-...+|.+++..
T Consensus 315 ~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~-e~G--lGPlHt~Fd~~G~a 391 (638)
T 3sbq_A 315 FTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP-ELG--LGPLHTTFDGRGNA 391 (638)
T ss_dssp SEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC-BCC--SCEEEEEECSSSEE
T ss_pred eEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec-cCC--CcccEEEECCCCce
Confidence 4444455666778999999999999999999999999985311111111 100 000000 001 34577899999977
Q ss_pred EEEEeCCCeEEEEeCCCC----------ceeEEEeCCCCcc
Q psy2085 116 ICVGTIEGKVEAWDPRMK----------VKAGTLDCAFNCI 146 (358)
Q Consensus 116 lasGs~DGtV~iWD~Rs~----------~~i~~L~~~~~~v 146 (358)
..|---|..|--|++... ..+..++.|.++.
T Consensus 392 YTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpG 432 (638)
T 3sbq_A 392 YTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPG 432 (638)
T ss_dssp EEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEE
T ss_pred EeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCc
Confidence 777778999999998653 3567888887653
No 253
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.74 E-value=0.29 Score=49.94 Aligned_cols=63 Identities=11% Similarity=0.103 Sum_probs=42.4
Q ss_pred CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCC
Q psy2085 67 KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAF 143 (358)
Q Consensus 67 d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~ 143 (358)
.+.|.+||+.+.......... ..+.+..+...++++..|+.||.|.+||.++++.+..+....
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~--------------~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 505 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEK--------------FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPS 505 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEES--------------SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CCeEEEEECCCCCEEEEecCC--------------CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCC
Confidence 357888888776555443221 112222233346777789999999999999999998887653
No 254
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=93.42 E-value=0.43 Score=43.82 Aligned_cols=98 Identities=10% Similarity=0.036 Sum_probs=64.1
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCC-CceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDN-LSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVE 126 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~-lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~ 126 (358)
.+.| +|||++|.++-+..++|.+||+.. ..+.. .+. +..+ .....+++.++++++++....+.|.
T Consensus 171 pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~-----~~~--~~~~-----~~P~gi~vd~dG~l~va~~~~~~V~ 236 (306)
T 2p4o_A 171 ANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGE-----PEI--FVEQ-----TNIDDFAFDVEGNLYGATHIYNSVV 236 (306)
T ss_dssp EEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCC-----CEE--EEES-----CCCSSEEEBTTCCEEEECBTTCCEE
T ss_pred CCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCc-----cEE--Eecc-----CCCCCeEECCCCCEEEEeCCCCeEE
Confidence 4555 899999888877888999999874 22110 011 1111 2345689999999988877789999
Q ss_pred EEeCCCCceeE--EEeCCCCccccccCCCccccccCCCceeeEEc---CCCCEEEE
Q psy2085 127 AWDPRMKVKAG--TLDCAFNCISNERDTEEKEGKASSDESSEEEE---EEEEEEES 177 (358)
Q Consensus 127 iWD~Rs~~~i~--~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs---~d~~~llS 177 (358)
++|+. ++... .+..+. ..|.+++|. |+++.|+-
T Consensus 237 ~~~~~-G~~~~~~~~~~~~-----------------~~p~~~a~~g~~~d~~~LyV 274 (306)
T 2p4o_A 237 RIAPD-RSTTIIAQAEQGV-----------------IGSTAVAFGQTEGDCTAIYV 274 (306)
T ss_dssp EECTT-CCEEEEECGGGTC-----------------TTEEEEEECCSTTTTTEEEE
T ss_pred EECCC-CCEEEEeeccccc-----------------CCceEEEEecccCCCCEEEE
Confidence 99985 54422 222111 112789998 78777663
No 255
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=93.40 E-value=0.9 Score=46.47 Aligned_cols=51 Identities=14% Similarity=-0.008 Sum_probs=33.2
Q ss_pred CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 122 EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+|.|..||+++++.+-.......... -.+. ..+.+|+. .| .++.||.+||+
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~----------------g~~~--tagglvf~g~~dg~l~A~D~~tG~ 518 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWA----------------GVLA--TAGNLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCS----------------CCEE--ETTTEEEEECTTSEEEEEETTTCC
T ss_pred cceEEEEECCCCCEEEEecCCCCCcc----------------cceE--eCCCEEEEECCCCcEEEEECCCCC
Confidence 68999999999988755543221100 0111 12455553 57 99999999999
No 256
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=93.22 E-value=5 Score=37.15 Aligned_cols=105 Identities=15% Similarity=0.134 Sum_probs=61.5
Q ss_pred CCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee
Q psy2085 57 GQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKA 136 (358)
Q Consensus 57 G~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i 136 (358)
+..|++ ++.++.|.++|..+....+.......+. .+..+. +..+..++.+|.|..+|+++++.+
T Consensus 103 ~~~v~v-~~~~g~l~a~d~~tG~~~W~~~~~~~~~-------------~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~ 166 (376)
T 3q7m_A 103 GGHVYI-GSEKAQVYALNTSDGTVAWQTKVAGEAL-------------SRPVVS--DGLVLIHTSNGQLQALNEADGAVK 166 (376)
T ss_dssp TTEEEE-EETTSEEEEEETTTCCEEEEEECSSCCC-------------SCCEEE--TTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCEEEE-EcCCCEEEEEECCCCCEEEEEeCCCceE-------------cCCEEE--CCEEEEEcCCCeEEEEECCCCcEE
Confidence 334543 5678899999998877665544332210 011111 457778899999999999999988
Q ss_pred EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCCCc
Q psy2085 137 GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEIKK 190 (358)
Q Consensus 137 ~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~tG~ 190 (358)
-............. . ...... ++..++. .+ .|..+|..+|+
T Consensus 167 W~~~~~~~~~~~~~-~-----------~~~~~~-~~~v~~g~~~g~l~~~d~~tG~ 209 (376)
T 3q7m_A 167 WTVNLDMPSLSLRG-E-----------SAPTTA-FGAAVVGGDNGRVSAVLMEQGQ 209 (376)
T ss_dssp EEEECCC-----CC-C-----------CCCEEE-TTEEEECCTTTEEEEEETTTCC
T ss_pred EEEeCCCCceeecC-C-----------CCcEEE-CCEEEEEcCCCEEEEEECCCCc
Confidence 76664322110000 0 111222 3333333 45 88999999888
No 257
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=92.81 E-value=0.3 Score=50.80 Aligned_cols=63 Identities=10% Similarity=0.168 Sum_probs=45.6
Q ss_pred CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCC
Q psy2085 67 KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAF 143 (358)
Q Consensus 67 d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~ 143 (358)
++.|..||+.+....+..... ..+....+...++++.+|+.||.|++||.++++.+..+..+.
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~--------------~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~ 499 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYP--------------THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEES--------------SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cceEEEEeCCCCcEEEEccCC--------------CCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCC
Confidence 367899998877665543321 122333444567899999999999999999999998887653
No 258
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=92.14 E-value=6.7 Score=36.12 Aligned_cols=111 Identities=13% Similarity=0.003 Sum_probs=70.4
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCC-CeE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIE-GKV 125 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~D-GtV 125 (358)
...+++.+.+..|..+-...++|.++|+.....+. ++..+. ...+.|++.|.++ ++.+.... +.|
T Consensus 79 p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~------------~~~~~~-~~P~~iavdp~~g~ly~~d~~~~~~I 145 (316)
T 1ijq_A 79 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKT------------LFRENG-SKPRAIVVDPVHGFMYWTDWGTPAKI 145 (316)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEE------------EEECTT-CCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred cCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEE------------EEECCC-CCcceEEeCCCCCEEEEEccCCCCeE
Confidence 46889988777777776667899999987432110 111111 4568999999655 45554433 788
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCC
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEI 188 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~t 188 (358)
...|+. ++....+-... + ..|+.|+|++++..|+-+| .|...|.+.
T Consensus 146 ~~~~~d-G~~~~~~~~~~--~--------------~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 146 KKGGLN-GVDIYSLVTEN--I--------------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp EEEETT-SCCEEEEECSS--C--------------SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEcCC-CCCeEEEEECC--C--------------CCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 888874 33333332110 0 1127899999988888765 788888863
No 259
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=91.96 E-value=0.48 Score=45.79 Aligned_cols=88 Identities=18% Similarity=0.391 Sum_probs=59.4
Q ss_pred EEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCC-CceeeeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCE
Q psy2085 38 LIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDN-LSMKFERCFDSEVVTFEILSDDYSSELNSIAINP-VHQL 115 (358)
Q Consensus 38 liqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~-lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~l 115 (358)
++.++.+ .|.|+|||||++|.++-+..++|..||+.. ..+...+. |. + + +....+++.+ +|++
T Consensus 216 ~~~~l~~---pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~-------~~-~-~---g~PDGi~vD~e~G~l 280 (355)
T 3sre_A 216 VAEGFDF---ANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRV-------LS-F-D---TLVDNISVDPVTGDL 280 (355)
T ss_dssp EEEEESS---EEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEE-------EE-C-S---SEEEEEEECTTTCCE
T ss_pred eecCCcc---cCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEE-------Ee-C-C---CCCceEEEeCCCCcE
Confidence 3445544 499999999999988888889999999963 22322111 11 1 1 4567889999 5998
Q ss_pred EEEEeCC-CeEEEEeCCC--CceeEEEe
Q psy2085 116 ICVGTIE-GKVEAWDPRM--KVKAGTLD 140 (358)
Q Consensus 116 lasGs~D-GtV~iWD~Rs--~~~i~~L~ 140 (358)
.+++..+ +.|..||+.. ++.+..+.
T Consensus 281 wva~~~~g~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 281 WVGCHPNGMRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp EEEEESCHHHHHSCCTTSCCCEEEEEEE
T ss_pred EEEecCCceEEEEECCCCCCCCEEEEEE
Confidence 8877644 5677778863 45555555
No 260
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=91.27 E-value=2.4 Score=43.41 Aligned_cols=120 Identities=13% Similarity=0.135 Sum_probs=69.4
Q ss_pred CCCCEeEEEEcC-CCCEEEEEEecCC-----------eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC
Q psy2085 44 MPGVSTSVRISP-DGQYVLSTGIYKP-----------RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP 111 (358)
Q Consensus 44 ~~~~v~~v~~Sp-DG~~LlatG~~d~-----------~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np 111 (358)
+|.....+++.| +|+. ++.|++++ .+.+||+.+..-. ... .+.........++++.+
T Consensus 184 ~P~~~~~~av~~~~g~l-~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~--~~~--------~~~~~~~~~~~~~~~~~ 252 (656)
T 1k3i_A 184 LPIVPAAAAIEPTSGRV-LMWSSYRNDAFGGSPGGITLTSSWDPSTGIVS--DRT--------VTVTKHDMFCPGISMDG 252 (656)
T ss_dssp CSSCCSEEEEETTTTEE-EEEEECCCTTTCSCCCSEEEEEEECTTTCCBC--CCE--------EEECSCCCSSCEEEECT
T ss_pred CCCCceeEEEEecCCEE-EEEecccccccccCCCCeEEEEEEeCCCCcEE--eCc--------ccCCCCCCccccccCCC
Confidence 343345778888 7764 45554432 5889998764321 100 01011112334577889
Q ss_pred CCCEEEEEeC-CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e--c------ce
Q psy2085 112 VHQLICVGTI-EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S--D------DD 181 (358)
Q Consensus 112 ~~~llasGs~-DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a--D------~I 181 (358)
++.++++||. ++.|++||+.+++-...-..+..- .. .++...++++.++. . + .+
T Consensus 253 ~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R--------------~~--~s~~~~~dg~iyv~GG~~~~~~~~~~~ 316 (656)
T 1k3i_A 253 NGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVAR--------------GY--QSSATMSDGRVFTIGGSWSGGVFEKNG 316 (656)
T ss_dssp TSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCC--------------SS--CEEEECTTSCEEEECCCCCSSSCCCCE
T ss_pred CCCEEEeCCCCCCceEEecCcCCceeECCCCCccc--------------cc--cceEEecCCeEEEEeCcccCCcccccc
Confidence 9999999994 568999999887543221111100 00 34566667776653 1 1 68
Q ss_pred EEEECCCCc
Q psy2085 182 QAWTKEIKK 190 (358)
Q Consensus 182 KIWD~~tG~ 190 (358)
.+||..+++
T Consensus 317 e~yd~~t~~ 325 (656)
T 1k3i_A 317 EVYSPSSKT 325 (656)
T ss_dssp EEEETTTTE
T ss_pred eEeCCCCCc
Confidence 899998775
No 261
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=91.27 E-value=1.2 Score=46.20 Aligned_cols=52 Identities=13% Similarity=0.168 Sum_probs=35.9
Q ss_pred CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCcE
Q psy2085 122 EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKKT 191 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~~ 191 (358)
+|.|..||+++++.+-....+... ....+...+.+|+. .| .+++||.++|+.
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~------------------~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHW------------------NGGTLSTAGNLVFQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSC------------------CCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cceEEEEeCCCCcEEEEccCCCCC------------------cCceeEeCCCEEEEECCcccchhhhhhcChh
Confidence 489999999999987666533221 12233445666664 46 999999999993
No 262
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=91.25 E-value=2 Score=41.34 Aligned_cols=110 Identities=9% Similarity=0.081 Sum_probs=64.8
Q ss_pred EeEEEEcC--CCC-EEEEEEec--CCeEEEEEcCCCc--eeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe
Q psy2085 48 STSVRISP--DGQ-YVLSTGIY--KPRVRCYETDNLS--MKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT 120 (358)
Q Consensus 48 v~~v~~Sp--DG~-~LlatG~~--d~~IrvwDl~~ls--lk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs 120 (358)
-..+.+.+ ||+ +|+++-.. ..+|.||++...+ +......+. +- -...|.+.+.+++.+.++..
T Consensus 114 PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g---------~~-~~~pND~~v~~~G~fyvt~~ 183 (355)
T 3sre_A 114 PHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH---------KL-LPSVNDIVAVGPEHFYATND 183 (355)
T ss_dssp EEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC---------TT-CSSEEEEEEEETTEEEEEES
T ss_pred eeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecccc---------CC-CCCCceEEEeCCCCEEecCC
Confidence 45566555 565 56666333 4678898876432 111111111 11 15689999999998888764
Q ss_pred -----------------CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----
Q psy2085 121 -----------------IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD---- 179 (358)
Q Consensus 121 -----------------~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD---- 179 (358)
..|.|-.+|+. + +..+..... .|+.|+|+||++.|+-+|
T Consensus 184 ~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~-~~~~~~~l~-----------------~pNGia~spDg~~lYvadt~~~ 243 (355)
T 3sre_A 184 HYFIDPYLKSWEMHLGLAWSFVTYYSPN--D-VRVVAEGFD-----------------FANGINISPDGKYVYIAELLAH 243 (355)
T ss_dssp CSCSSHHHHHHHHHTTCCCEEEEEECTT--C-CEEEEEEES-----------------SEEEEEECTTSSEEEEEEGGGT
T ss_pred cEeCCcccccchhhccCCccEEEEEECC--e-EEEeecCCc-----------------ccCcceECCCCCEEEEEeCCCC
Confidence 13566667763 2 222211110 128899999999888655
Q ss_pred ceEEEECC
Q psy2085 180 DDQAWTKE 187 (358)
Q Consensus 180 ~IKIWD~~ 187 (358)
.|..||..
T Consensus 244 ~I~~~~~~ 251 (355)
T 3sre_A 244 KIHVYEKH 251 (355)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEC
Confidence 78888875
No 263
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=90.93 E-value=3.1 Score=38.62 Aligned_cols=96 Identities=13% Similarity=0.006 Sum_probs=59.6
Q ss_pred CEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE
Q psy2085 58 QYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAG 137 (358)
Q Consensus 58 ~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~ 137 (358)
..|+ .+++++.|.++|..+....+.... .....+.. .+..+..++.+|.|.++|+.+++.+-
T Consensus 240 ~~v~-~~~~~g~l~~~d~~tG~~~w~~~~---------------~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w 301 (376)
T 3q7m_A 240 GVVF-ALAYNGNLTALDLRSGQIMWKREL---------------GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLW 301 (376)
T ss_dssp TEEE-EECTTSCEEEEETTTCCEEEEECC---------------CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEE
T ss_pred CEEE-EEecCcEEEEEECCCCcEEeeccC---------------CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEE
Confidence 3443 345788999999987655443322 12233333 35677777889999999999998876
Q ss_pred EEeCC-CCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 138 TLDCA-FNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 138 ~L~~~-~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
..... .... .+.... +..|+. .+ .+.++|..+|+
T Consensus 302 ~~~~~~~~~~-----------------~~~~~~--~~~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 302 TQSDLLHRLL-----------------TSPVLY--NGNLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp EECTTTTSCC-----------------CCCEEE--TTEEEEECTTSEEEEEETTTCC
T ss_pred eecccCCCcc-----------------cCCEEE--CCEEEEEeCCCeEEEEECCCCc
Confidence 65521 1111 112222 234443 35 89999999998
No 264
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=90.90 E-value=5.8 Score=38.70 Aligned_cols=31 Identities=13% Similarity=0.005 Sum_probs=20.9
Q ss_pred EeEEEEcCC--CCEEEEEEecCCeEEEEEcCCCc
Q psy2085 48 STSVRISPD--GQYVLSTGIYKPRVRCYETDNLS 79 (358)
Q Consensus 48 v~~v~~SpD--G~~LlatG~~d~~IrvwDl~~ls 79 (358)
-..|+|+|+ +..|..+-.. +.|+.+|+.+..
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~ 173 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQY 173 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT-SCEEEEETTTTE
T ss_pred CceEEEccccCCCEEEEEeCC-CCEEEEECCCCE
Confidence 368899995 3446555333 789999986543
No 265
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=90.82 E-value=9 Score=34.99 Aligned_cols=124 Identities=7% Similarity=0.026 Sum_probs=72.4
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCC----ceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEeC
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNL----SMKFERCFDSEVVTFEILSDDYSSELNSIAINPV-HQLICVGTI 121 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~l----slk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~-~~llasGs~ 121 (358)
..-.++++|+++.|+++...+| ..||.+... .++..... . +........+.+|+++|. +.+++....
T Consensus 122 g~EGLA~d~~~~~L~va~E~~p-~~i~~~~g~~~~~~l~i~~~~--~-----~~~~~~~~d~S~l~~dp~tg~lliLS~~ 193 (255)
T 3qqz_A 122 GFEGLAYSRQDHTFWFFKEKNP-IEVYKVNGLLSSNELHISKDK--A-----LQRQFTLDDVSGAEFNQQKNTLLVLSHE 193 (255)
T ss_dssp CCEEEEEETTTTEEEEEEESSS-EEEEEEESTTCSSCCEEEECH--H-----HHHTCCSSCCCEEEEETTTTEEEEEETT
T ss_pred CcceEEEeCCCCEEEEEECcCC-ceEEEEcccccCCceeeecch--h-----hccccccCCceeEEEcCCCCeEEEEECC
Confidence 4579999999988887766555 455555421 11110000 0 000011135789999997 557788788
Q ss_pred CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec--ceEEEECC
Q psy2085 122 EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD--DDQAWTKE 187 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD--~IKIWD~~ 187 (358)
...+-..|.. ++.+..+......-...- +-++|-.|+|.++|+..+++. .+-++...
T Consensus 194 s~~L~~~d~~-g~~~~~~~L~~g~~~l~~--------~~~qpEGia~d~~G~lyIvsE~n~~y~f~~~ 252 (255)
T 3qqz_A 194 SRALQEVTLV-GEVIGEMSLTKGSRGLSH--------NIKQAEGVAMDASGNIYIVSEPNRFYRFTPQ 252 (255)
T ss_dssp TTEEEEECTT-CCEEEEEECSTTGGGCSS--------CCCSEEEEEECTTCCEEEEETTTEEEEEEC-
T ss_pred CCeEEEEcCC-CCEEEEEEcCCccCCccc--------ccCCCCeeEECCCCCEEEEcCCceEEEEEec
Confidence 8999999965 557776664321100000 112347899999999777766 44444443
No 266
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=90.72 E-value=2.6 Score=44.19 Aligned_cols=75 Identities=15% Similarity=0.112 Sum_probs=45.5
Q ss_pred EeEEEEcCCCCEEEEEEecC----CeEEEEEcCCCceeeeeeccCceEEEEEee-cCCCCCeeEEEEcCCCCEEEEEeC-
Q psy2085 48 STSVRISPDGQYVLSTGIYK----PRVRCYETDNLSMKFERCFDSEVVTFEILS-DDYSSELNSIAINPVHQLICVGTI- 121 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d----~~IrvwDl~~lslk~~r~~d~e~v~f~~LS-~D~s~~In~i~~np~~~llasGs~- 121 (358)
...+.|||||+.|+.+.... .+|.++++.+... +.+ .+.. ++. .....+.|+|++..|+..+.
T Consensus 223 ~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~--------~~~--lv~~~~~~-~~~~~~~~SpDg~~l~~~~~~ 291 (751)
T 2xe4_A 223 NGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQS--------EDV--CLYEEHNP-LFSAFMYKAADTNTLCIGSQS 291 (751)
T ss_dssp CSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGG--------GCE--EEEECCCT-TCEEEEEECTTSSEEEEEEEC
T ss_pred eeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCch--------hcE--EEEecCCC-ceEEEEEECCCCCEEEEEecC
Confidence 35689999999887764321 2677788765321 100 1111 111 23567899999997766553
Q ss_pred --CCeEEEEeCCCC
Q psy2085 122 --EGKVEAWDPRMK 133 (358)
Q Consensus 122 --DGtV~iWD~Rs~ 133 (358)
...|.++|+.++
T Consensus 292 ~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 292 PETAEVHLLDLRKG 305 (751)
T ss_dssp SSCEEEEEEESSSC
T ss_pred CCCceEEEEECCCC
Confidence 345777888765
No 267
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=90.67 E-value=13 Score=36.16 Aligned_cols=131 Identities=10% Similarity=-0.072 Sum_probs=73.2
Q ss_pred eEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEE--eecCCC---------CCeeEEEE--------
Q psy2085 49 TSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEI--LSDDYS---------SELNSIAI-------- 109 (358)
Q Consensus 49 ~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~--LS~D~s---------~~In~i~~-------- 109 (358)
..++|+|+|++|..+-....+|..++.......+. ....+.- -...+. ..-..+++
T Consensus 276 ~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~-----~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~ 350 (433)
T 4hw6_A 276 FHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLA-----VPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAG 350 (433)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBC-----CCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTT
T ss_pred ccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccC-----cEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccc
Confidence 46999999998877766778999988763211110 0000000 000010 23567888
Q ss_pred -cCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccc--cCCCceeeEEcCCCCEEEEec----ceE
Q psy2085 110 -NPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGK--ASSDESSEEEEEEEEEEESSD----DDQ 182 (358)
Q Consensus 110 -np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~Gt--Rs~~P~sI~fs~d~~~llSaD----~IK 182 (358)
.+++.++++-+..+.|+.+|+ ++ .+.++.+........+ .+|..++ +-..|..|+++|....|+-+| .|+
T Consensus 351 dd~~g~lyvaD~~n~~I~~~~~-~G-~v~t~~G~g~~~~~G~-~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr 427 (433)
T 4hw6_A 351 EEDEYDFYFCDRDSHTVRVLTP-EG-RVTTYAGRGNSREWGY-VDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVR 427 (433)
T ss_dssp SSCCEEEEEEETTTTEEEEECT-TS-EEEEEECCCTTCSSCC-BCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEE
T ss_pred cCCCCcEEEEECCCCEEEEECC-CC-CEEEEEeCCCCCcccc-CCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEE
Confidence 677888888888899999996 55 4445543221000000 1110111 334568999994444454444 777
Q ss_pred EEECC
Q psy2085 183 AWTKE 187 (358)
Q Consensus 183 IWD~~ 187 (358)
..+++
T Consensus 428 ~i~~e 432 (433)
T 4hw6_A 428 KIAPE 432 (433)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 77654
No 268
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=90.63 E-value=1.2 Score=44.49 Aligned_cols=84 Identities=11% Similarity=0.053 Sum_probs=54.7
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc-eeeeeeccCc-eEEEEEeecC---CCCCeeEEEEcCC---CCEEEE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS-MKFERCFDSE-VVTFEILSDD---YSSELNSIAINPV---HQLICV 118 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls-lk~~r~~d~e-~v~f~~LS~D---~s~~In~i~~np~---~~llas 118 (358)
.+..+..||+|.+|+..| +.+|.|-+++... .......+.. .+..--+.+- -...|..+-|||- +..|++
T Consensus 67 ~i~qlvlSpsG~lLAl~g--~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN--DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECTTSSEEEEEC--SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeEEEECCCCCEEEEec--CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 467899999999998877 4589999998321 1110000000 0111112211 1267999999995 457888
Q ss_pred EeCCCeEEEEeCCC
Q psy2085 119 GTIEGKVEAWDPRM 132 (358)
Q Consensus 119 Gs~DGtV~iWD~Rs 132 (358)
=++|++|++||+..
T Consensus 145 LtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 145 LKEDDTITMFDILN 158 (452)
T ss_dssp EETTSCEEEEETTC
T ss_pred EecCCEEEEEEccc
Confidence 89999999999976
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=90.44 E-value=2.3 Score=41.51 Aligned_cols=109 Identities=11% Similarity=0.024 Sum_probs=63.7
Q ss_pred EeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCC--
Q psy2085 48 STSVRISP-DGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIEG-- 123 (358)
Q Consensus 48 v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~DG-- 123 (358)
-..++++| ++..|.++-.. +.|+.+|+....+... .. . ....+.|+|+++++ ++++...++
T Consensus 139 P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~------------~~-~-~~~P~~ia~d~~G~~lyvad~~~~~~ 203 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTV------------YS-G-LSKVRTICWTHEADSMIITNDQNNND 203 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEE------------EC-C-CSCEEEEEECTTSSEEEEEECCSCTT
T ss_pred CCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEE------------ec-C-CCCcceEEEeCCCCEEEEEeCCCCcc
Confidence 36789998 45567666443 7899999876432211 00 1 14578999999998 666655333
Q ss_pred --eEEEEeCCCCcee--EEEeCCCCccccccCCCccccccCCCceeeEEcC-CCCEEEE--ec-ceEEEECCCCc
Q psy2085 124 --KVEAWDPRMKVKA--GTLDCAFNCISNERDTEEKEGKASSDESSEEEEE-EEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 124 --tV~iWD~Rs~~~i--~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~-d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.|-..+ +.+... ..+....+ |..|+++| +|...++ .+ .|..+|..++.
T Consensus 204 ~~~v~~~~-~~g~~~~~~~l~~~~~------------------p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~ 259 (430)
T 3tc9_A 204 RPNNYILT-RESGFKVITELTKGQN------------------CNGAETHPINGELYFNSWNAGQVFRYDFTTQE 259 (430)
T ss_dssp SEEEEEEE-GGGTSCSEEEEEECSS------------------CCCEEECTTTCCEEEEETTTTEEEEEETTTTE
T ss_pred cceEEEEe-CCCceeeeeeeccCCC------------------ceEEEEeCCCCEEEEEECCCCEEEEEECCCCc
Confidence 233333 333221 22221111 26799999 5554444 23 88899988765
No 270
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=89.98 E-value=13 Score=34.90 Aligned_cols=111 Identities=10% Similarity=-0.053 Sum_probs=70.5
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCC-CeE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIE-GKV 125 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~D-GtV 125 (358)
...+++.+.+..|..+-...++|.+.++.....+. ++..+. ..-+.|++.|.++ ++.+-... +.|
T Consensus 118 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~------------l~~~~l-~~P~~iavdp~~g~ly~td~~~~~~I 184 (349)
T 3v64_C 118 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV------------LLWQSL-EKPRAIALHPMEGTIYWTDWGNTPRI 184 (349)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE------------EECTTC-SCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred ccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE------------EEeCCC-CCcceEEEecCcCeEEEeccCCCCEE
Confidence 46789998777777776667799999987532111 111111 3568999999655 55555555 888
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCC
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEI 188 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~t 188 (358)
...|+.... ...+-. .. -..|+.|+|+|++..|+-+| .|..+|.+.
T Consensus 185 ~r~~~dG~~-~~~~~~-~~---------------~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 185 EASSMDGSG-RRIIAD-TH---------------LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp EEEETTSCS-CEESCC-SS---------------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEeCCCCC-cEEEEE-CC---------------CCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 888875432 222211 00 01237899999888888665 788888763
No 271
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=89.97 E-value=13 Score=35.23 Aligned_cols=111 Identities=11% Similarity=-0.032 Sum_probs=69.6
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCC-CeE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIE-GKV 125 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~D-GtV 125 (358)
...+++.+.+..|..+-...++|.+.++.....+. ++..+. ..-+.|++.|.++ ++.+-... +.|
T Consensus 161 p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~------------l~~~~l-~~P~giavdp~~g~ly~td~~~~~~I 227 (386)
T 3v65_B 161 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV------------LLWQSL-EKPRAIALHPMEGTIYWTDWGNTPRI 227 (386)
T ss_dssp CCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE------------EECSSC-SCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred ccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE------------eecCCC-CCCcEEEEEcCCCeEEEeccCCCCEE
Confidence 36788888777777776667788888876432110 111111 3568999998765 55554445 788
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCC
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEI 188 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~t 188 (358)
...|+........+..... .|+.|+|+|++..|+-+| .|..+|.+.
T Consensus 228 ~r~~~dG~~~~~~~~~~~~-----------------~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 228 EASSMDGSGRRIIADTHLF-----------------WPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp EEEETTSCSCEEEECSSCS-----------------CEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred EEEeCCCCCcEEEEECCCC-----------------CeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 8888764433222221111 127899999888888665 788888753
No 272
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=89.81 E-value=5.8 Score=40.76 Aligned_cols=29 Identities=14% Similarity=0.088 Sum_probs=21.6
Q ss_pred CCCC--EEEEEEecCCeEEEEEcCCCceeee
Q psy2085 55 PDGQ--YVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 55 pDG~--~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
.||+ .+++.++.++.+.++|..+..+...
T Consensus 318 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~ 348 (599)
T 1w6s_A 318 KDGKARKLLTHPDRNGIVYTLDRTDGALVSA 348 (599)
T ss_dssp TTSCEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred cCCcEEEEEEEECCCcEEEEEECCCCCEeec
Confidence 5784 4556678899999999988765543
No 273
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=89.29 E-value=12 Score=35.79 Aligned_cols=116 Identities=8% Similarity=-0.020 Sum_probs=70.2
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEeCCCe
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGTIEGK 124 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs~DGt 124 (358)
..+..++|.+.+..|..+-...++|..+++...... .... .++..+ ......|++.+ .+.+..+-+..+.
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~------~~~~--~~~~~~-~~~p~glavD~~~~~lY~~d~~~~~ 182 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------SSYD--TVISRD-IQAPDGLAVDWIHSNIYWTDSVLGT 182 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC------------CCCE--EEECSS-CSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCC------Ccce--EEEeCC-CCCcccEEEEecCCceEEEECCCCe
Confidence 456889999987788777666788998988642100 0000 011111 14578899998 4567777778899
Q ss_pred EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-----ceEEEECC
Q psy2085 125 VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-----DDQAWTKE 187 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-----~IKIWD~~ 187 (358)
|.+.|+..+.....+..... .|..|+++|.+..|+-+| .|...+++
T Consensus 183 I~~~~~~g~~~~~l~~~~~~-----------------~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 183 VSVADTKGVKRKTLFRENGS-----------------KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp EEEECTTTCSEEEEEECSSC-----------------CEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred EEEEeCCCCceEEEEeCCCC-----------------CcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 99999876654444432211 126788888766666433 45555654
No 274
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=89.25 E-value=4.5 Score=40.83 Aligned_cols=116 Identities=16% Similarity=0.061 Sum_probs=67.7
Q ss_pred CEeEEEE-------cCCCCEEEEEEecC------CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC-C
Q psy2085 47 VSTSVRI-------SPDGQYVLSTGIYK------PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP-V 112 (358)
Q Consensus 47 ~v~~v~~-------SpDG~~LlatG~~d------~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~ 112 (358)
....|+| +++|++|+++.... ..|.+++-.. ...+....+...+ . .+ ...+.++++| +
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~-~G~~~~~~~~~~v--~----~~-~~p~giavdp~~ 258 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNA-DGTFDDRSDIQLI--A----AY-KQCNGATIHPIN 258 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCT-TSCCSTTSCEEEE--E----EE-SCCCCEEECTTT
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCC-CCceeecccceee--c----cC-CCceEEEEcCCC
Confidence 4789999 99999887775433 1355665332 1112100000011 1 11 3457889999 5
Q ss_pred CCEEEEEeCCCeEEEEeCC-------CCce-----------eEEE-eCCCCccccccCCCccccccCCCceeeEEcCCCC
Q psy2085 113 HQLICVGTIEGKVEAWDPR-------MKVK-----------AGTL-DCAFNCISNERDTEEKEGKASSDESSEEEEEEEE 173 (358)
Q Consensus 113 ~~llasGs~DGtV~iWD~R-------s~~~-----------i~~L-~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~ 173 (358)
+.|+++-..+|.|..+|+. ++.. ...+ ..+.. ..|..|+|+|+|+
T Consensus 259 g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~----------------~~p~~ia~~p~G~ 322 (496)
T 3kya_A 259 GELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADP----------------SWEFQIFIHPTGK 322 (496)
T ss_dssp CCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSS----------------SCCEEEEECTTSS
T ss_pred CeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCC----------------CCceEEEEcCCCC
Confidence 6788888889999999997 5543 1122 11111 1127899999999
Q ss_pred EEEEec----ceEEEEC
Q psy2085 174 EEESSD----DDQAWTK 186 (358)
Q Consensus 174 ~llSaD----~IKIWD~ 186 (358)
.|+-+| .|+.+|.
T Consensus 323 ~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 323 YAYFGVINNHYFMRSDY 339 (496)
T ss_dssp EEEEEETTTTEEEEEEE
T ss_pred EEEEEeCCCCEEEEEec
Confidence 666544 6766443
No 275
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=89.23 E-value=1.7 Score=44.73 Aligned_cols=63 Identities=14% Similarity=0.162 Sum_probs=41.4
Q ss_pred CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCC
Q psy2085 68 PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFN 144 (358)
Q Consensus 68 ~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~ 144 (358)
+.|..||+.+........... .+..-.+.-.++++..|+.||.++.||.++++.+-.+..+..
T Consensus 453 G~l~A~D~~tG~~~W~~~~~~--------------~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g 515 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMERF--------------AVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSG 515 (599)
T ss_dssp EEEEEECTTTCCEEEEEEESS--------------CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred CeEEEEECCCCCEEeEecCCC--------------CccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCC
Confidence 567777777665554432211 111111223567888899999999999999999988876543
No 276
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=88.82 E-value=5.9 Score=39.50 Aligned_cols=112 Identities=7% Similarity=-0.035 Sum_probs=63.5
Q ss_pred EEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCce-EEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy2085 52 RISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEV-VTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDP 130 (358)
Q Consensus 52 ~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~-v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~ 130 (358)
-.+.+|.-|+.. .++.||+-++.... .+. .++.+. + .+ +.|..+..||+|.+||.-|. .+|.+-.+
T Consensus 27 ~~~~n~t~i~~a--~~n~iR~~~i~~~~-~Yk-~L~~~~~i-------~f-~~i~qlvlSpsG~lLAl~g~-~~V~Vv~L 93 (452)
T 3pbp_A 27 FSSQNGTRIVFI--QDNIIRWYNVLTDS-LYH-SLNFSRHL-------VL-DDTFHVISSTSGDLLCLFND-NEIFVMEV 93 (452)
T ss_dssp EEETTTTEEEEE--ETTEEEEEETTTCS-SCE-EEECTTTC-------CC-CTTCEEEECTTSSEEEEECS-SEEEEEEC
T ss_pred EEEcCCCEEEEE--ECCEEEEEECCCCC-cce-EEecCccc-------cc-CceeEEEECCCCCEEEEecC-CeEEEEEe
Confidence 445577766543 35789999887432 110 000000 0 11 35788999999999999775 57777665
Q ss_pred CCCce------------eEEEeCCCCccccccCCCccccccCCCc-eeeEEcCCC---CEEE--Eec-ceEEEECCC
Q psy2085 131 RMKVK------------AGTLDCAFNCISNERDTEEKEGKASSDE-SSEEEEEEE---EEEE--SSD-DDQAWTKEI 188 (358)
Q Consensus 131 Rs~~~------------i~~L~~~~~~v~~~~~i~gl~GtRs~~P-~sI~fs~d~---~~ll--SaD-~IKIWD~~t 188 (358)
-.+.. +.++...... + .++.| .++.|||-+ ..|+ +.| +|++||+..
T Consensus 94 P~~~~~~~~~~~~~~~q~~ty~l~~~~-----------~-~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 94 PWGYSNVEDVSIQDAFQIFHYSIDEEE-----------V-GPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp CTTCSCCCCHHHHHTTEEEEEEGGGCC--------------CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred cCccccCcccccccccceeEEEcCCcc-----------c-CCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 42211 1112111000 0 00111 899999954 3444 688 999999986
No 277
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=88.74 E-value=25 Score=37.29 Aligned_cols=111 Identities=10% Similarity=-0.042 Sum_probs=71.7
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeC-CCeE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTI-EGKV 125 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~-DGtV 125 (358)
...|++.+.|+.|..+-...++|.+.++.....+. ++..+. ...+.|++.|.++ |+.+-.. .+.|
T Consensus 473 P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~------------l~~~~l-~~P~gIaVDp~~g~LYwtD~g~~~~I 539 (791)
T 3m0c_C 473 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKT------------LFRENG-SKPRAIVVDPVHGFMYWTDWGTPAKI 539 (791)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEE------------EEECTT-CCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred cceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEE------------EEeCCC-CCcceEEEecCCCCEEEecCCCCCeE
Confidence 46799999888888887778899999987532111 111111 3578999999855 4444423 3789
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCC
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEI 188 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~t 188 (358)
+..++........+.... ..|+.|++++.+..|+-+| .|...|+..
T Consensus 540 ~~~~~dG~~~~~lv~~~l-----------------~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 540 KKGGLNGVDIYSLVTENI-----------------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp EEEETTSCCEEEEECSSC-----------------SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEecCCCceEEEEeCCC-----------------CCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 988886443332232211 1237899998888888766 677777753
No 278
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=88.52 E-value=6.5 Score=35.06 Aligned_cols=106 Identities=14% Similarity=0.065 Sum_probs=65.9
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVE 126 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~ 126 (358)
.+.++.+.++|..++ |+.++.|.+||.. .......... . ..+.++.+.+++.+++. + +.|.
T Consensus 138 ~~~~~~~~~~g~l~v--gt~~~~l~~~d~~-g~~~~~~~~~----------~---~~~~~~~~d~~g~l~v~-t--~~l~ 198 (330)
T 3hxj_A 138 IYATPIVSEDGTIYV--GSNDNYLYAINPD-GTEKWRFKTN----------D---AITSAASIGKDGTIYFG-S--DKVY 198 (330)
T ss_dssp CCSCCEECTTSCEEE--ECTTSEEEEECTT-SCEEEEEECS----------S---CCCSCCEECTTCCEEEE-S--SSEE
T ss_pred eeeeeEEcCCCEEEE--EcCCCEEEEECCC-CCEeEEEecC----------C---CceeeeEEcCCCEEEEE-e--CEEE
Confidence 456667777887443 4566788888877 3332221111 0 34666777777776654 4 8889
Q ss_pred EEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe-c-ceEEEECCCCc
Q psy2085 127 AWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS-D-DDQAWTKEIKK 190 (358)
Q Consensus 127 iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa-D-~IKIWD~~tG~ 190 (358)
++| .+++.+.........+ .++...++|...+++ + .|..+|. +|+
T Consensus 199 ~~d-~~g~~~~~~~~~~~~~-----------------~~~~~~~~g~l~v~t~~~gl~~~~~-~g~ 245 (330)
T 3hxj_A 199 AIN-PDGTEKWNFYAGYWTV-----------------TRPAISEDGTIYVTSLDGHLYAINP-DGT 245 (330)
T ss_dssp EEC-TTSCEEEEECCSSCCC-----------------SCCEECTTSCEEEEETTTEEEEECT-TSC
T ss_pred EEC-CCCcEEEEEccCCcce-----------------eceEECCCCeEEEEcCCCeEEEECC-CCC
Confidence 999 6777666555433322 567788888766654 5 6777775 455
No 279
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=88.23 E-value=14 Score=38.47 Aligned_cols=124 Identities=9% Similarity=0.066 Sum_probs=75.2
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEE-EeecCCCCCeeEEEEcCCCCEEEEEeCCCe
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFE-ILSDDYSSELNSIAINPVHQLICVGTIEGK 124 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~-~LS~D~s~~In~i~~np~~~llasGs~DGt 124 (358)
..|.++...++|..-+ |++++-|.+||..+...+ ....... .-. .++. ..|.+++..+++.+|-.|+.++-
T Consensus 357 ~~V~~i~~d~~g~lWi--Gt~~~Gl~~~~~~~~~~~--~~~~~~~-~~~~~l~~---~~v~~i~~d~~g~~lWigt~~~G 428 (795)
T 4a2l_A 357 NVVSCIVEDKDKNLWI--GTNDGGLNLYNPITQRFT--SYTLQED-ESARGIGS---NNIKAVYVDEKKSLVYIGTHAGG 428 (795)
T ss_dssp SSEEEEEECTTSCEEE--EESSSCEEEECTTTCCEE--EECCC-------CCSC---SCEEEEEEETTTTEEEEEETTTE
T ss_pred CeeEEEEECCCCCEEE--EECCCCeEEEcCCCCcEE--EEecCCC-CcccCCCC---ccEEEEEEcCCCCEEEEEeCcCc
Confidence 3589999999998543 566667999998754322 1110000 000 0111 46889999888885666788778
Q ss_pred EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-ceEEEECCCCc
Q psy2085 125 VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-DDQAWTKEIKK 190 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-~IKIWD~~tG~ 190 (358)
|.+||+.+++.. .+....... ....+ .+|...++|...+++. .+.+||..+++
T Consensus 429 l~~~d~~~~~~~-~~~~~~~~l-~~~~v-----------~~i~~d~~g~lwigt~~Gl~~~~~~~~~ 482 (795)
T 4a2l_A 429 LSILHRNSGQVE-NFNQRNSQL-VNENV-----------YAILPDGEGNLWLGTLSALVRFNPEQRS 482 (795)
T ss_dssp EEEEETTTCCEE-EECTTTSCC-SCSCE-----------EEEEECSSSCEEEEESSCEEEEETTTTE
T ss_pred eeEEeCCCCcEE-EeecCCCCc-CCCee-----------EEEEECCCCCEEEEecCceeEEeCCCCe
Confidence 999999887643 332111000 00011 6677777888777666 77788887665
No 280
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=88.12 E-value=6.4 Score=38.04 Aligned_cols=124 Identities=15% Similarity=0.238 Sum_probs=69.2
Q ss_pred eEEEEeeCCCCEeEEEEcCC----CC---EEEEEEec--CCeEEEEEcCC--CceeeeeeccCceEEEEEeecCCCCCee
Q psy2085 37 ELIQDFEMPGVSTSVRISPD----GQ---YVLSTGIY--KPRVRCYETDN--LSMKFERCFDSEVVTFEILSDDYSSELN 105 (358)
Q Consensus 37 eliqdfe~~~~v~~v~~SpD----G~---~LlatG~~--d~~IrvwDl~~--lslk~~r~~d~e~v~f~~LS~D~s~~In 105 (358)
+++|.+.. +..+.|.+-|+ |+ .+++|... ..+|.+|++.. ..++.-...... + ..+ ...+.
T Consensus 60 ~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~p-v-----~t~-~~~py 131 (355)
T 3amr_A 60 KMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHP-I-----ATA-INEVY 131 (355)
T ss_dssp CEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSC-E-----ECC-CSSCC
T ss_pred cEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccC-c-----CCC-CCCee
Confidence 45555543 56788877773 32 34455545 68999998742 222211000001 0 000 02455
Q ss_pred EEEE--cCC-CC-EEEEEeCCCeEEEEeCC-------CCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCE
Q psy2085 106 SIAI--NPV-HQ-LICVGTIEGKVEAWDPR-------MKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEE 174 (358)
Q Consensus 106 ~i~~--np~-~~-llasGs~DGtV~iWD~R-------s~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ 174 (358)
.+|+ +|. +. .+.....+|.+..|++. +.+.+.++.....+ -.+...+....
T Consensus 132 Glcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~------------------EgcvvDd~~g~ 193 (355)
T 3amr_A 132 GFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQT------------------EGMAADDEYGR 193 (355)
T ss_dssp CEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCE------------------EEEEEETTTTE
T ss_pred EEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCc------------------ceEEEcCCCCe
Confidence 5666 775 43 35555668999999982 33556777765433 45677777777
Q ss_pred EEEec-ceEEEEC
Q psy2085 175 EESSD-DDQAWTK 186 (358)
Q Consensus 175 llSaD-~IKIWD~ 186 (358)
|+-++ .+-||-.
T Consensus 194 Lyv~eEd~GIw~~ 206 (355)
T 3amr_A 194 LYIAEEDEAIWKF 206 (355)
T ss_dssp EEEEETTTEEEEE
T ss_pred EEEecccceEEEE
Confidence 77666 4456644
No 281
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=87.84 E-value=12 Score=33.38 Aligned_cols=107 Identities=16% Similarity=0.088 Sum_probs=60.8
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
..+.++.+.++|...+ |++++.|.++|... ......... . ..+.++.+.+++. |..|+.+|.|
T Consensus 215 ~~~~~~~~~~~g~l~v--~t~~~gl~~~~~~g-~~~~~~~~~-----------~--~~~~~~~~~~~g~-l~v~t~~ggl 277 (330)
T 3hxj_A 215 WTVTRPAISEDGTIYV--TSLDGHLYAINPDG-TEKWRFKTG-----------K--RIESSPVIGNTDT-IYFGSYDGHL 277 (330)
T ss_dssp CCCSCCEECTTSCEEE--EETTTEEEEECTTS-CEEEEEECS-----------S--CCCSCCEECTTSC-EEEECTTCEE
T ss_pred cceeceEECCCCeEEE--EcCCCeEEEECCCC-CEeEEeeCC-----------C--CccccceEcCCCe-EEEecCCCCE
Confidence 3466777777776432 34566677776432 111111100 0 2234455555554 4557888899
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe-c-ceEEEECC
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS-D-DDQAWTKE 187 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa-D-~IKIWD~~ 187 (358)
.++|+ +++.+..+..+...+ .++...++|...+++ + .+.+....
T Consensus 278 ~~~d~-~g~~~~~~~~~~~~~-----------------~~~~~d~~g~l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 278 YAINP-DGTEKWNFETGSWII-----------------ATPVIDENGTIYFGTRNGKFYALFNL 323 (330)
T ss_dssp EEECT-TSCEEEEEECSSCCC-----------------SCCEECTTCCEEEECTTSCEEEEEC-
T ss_pred EEECC-CCcEEEEEEcCCccc-----------------cceEEcCCCEEEEEcCCCeEEEEecc
Confidence 99996 677766665443322 557777788877764 4 77766543
No 282
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=87.49 E-value=6.6 Score=36.99 Aligned_cols=84 Identities=17% Similarity=0.216 Sum_probs=48.8
Q ss_pred ceeEEEE-eeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-
Q psy2085 35 RIELIQD-FEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV- 112 (358)
Q Consensus 35 rIeliqd-fe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~- 112 (358)
+++++.+ +.+ -..++|.|||+.+ ++ ...++|.+++ . ......... ... .+.....+.|+|+|+
T Consensus 22 ~~~~va~~l~~---P~~ia~~pdG~l~-V~-e~~g~I~~i~-~-g~~~~~~~~-------~v~-~~g~~~p~gia~~pdf 86 (352)
T 2ism_A 22 RVEEVVGGLEV---PWALAFLPDGGML-IA-ERPGRIRLFR-E-GRLSTYAEL-------SVY-HRGESGLLGLALHPRF 86 (352)
T ss_dssp CEEEEECCCSC---EEEEEECTTSCEE-EE-ETTTEEEEEE-T-TEEEEEEEC-------CCC-CSTTCSEEEEEECTTT
T ss_pred EEEEEECCCCC---ceEEEEcCCCeEE-EE-eCCCeEEEEE-C-CCccEeecc-------eEe-ecCCCCceeEEECCCC
Confidence 5566554 333 4789999999954 44 3468999998 2 221110000 001 111257899999998
Q ss_pred ---CCEEEEEeCC-----CeEEEEeCCCC
Q psy2085 113 ---HQLICVGTIE-----GKVEAWDPRMK 133 (358)
Q Consensus 113 ---~~llasGs~D-----GtV~iWD~Rs~ 133 (358)
+.+.++-+.. +.|..|++..+
T Consensus 87 ~~~g~lYv~~~~~~~~~~~~v~r~~~~~~ 115 (352)
T 2ism_A 87 PQEPYVYAYRTVAEGGLRNQVVRLRHLGE 115 (352)
T ss_dssp TTSCEEEEEEEECTTSSEEEEEEEEECSS
T ss_pred CCCCEEEEEEecCCCCCccEEEEEEeCCC
Confidence 4455554433 67777887643
No 283
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=86.84 E-value=18 Score=32.91 Aligned_cols=119 Identities=8% Similarity=0.016 Sum_probs=70.1
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG 123 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG 123 (358)
+...+..+++.|++..|+++...+++|-..|+. . +..+.. .+. .....-.|++.+++.++++.-.++
T Consensus 25 ~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g--~v~~~i--------~l~--g~~D~EGIa~~~~g~~~vs~E~~~ 91 (255)
T 3qqz_A 25 ITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-G--DLIRTI--------PLD--FVKDLETIEYIGDNQFVISDERDY 91 (255)
T ss_dssp CCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-C--CEEEEE--------ECS--SCSSEEEEEECSTTEEEEEETTTT
T ss_pred cccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-C--CEEEEE--------ecC--CCCChHHeEEeCCCEEEEEECCCC
Confidence 445699999999988888887778888888886 2 222221 111 013356777778777666644567
Q ss_pred eEEEEeCCCCcee---EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec--ceEEEEC
Q psy2085 124 KVEAWDPRMKVKA---GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD--DDQAWTK 186 (358)
Q Consensus 124 tV~iWD~Rs~~~i---~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD--~IKIWD~ 186 (358)
.+-++++.....+ .....+.......... -.|+|+|.++.|+. .. ...||..
T Consensus 92 ~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~-----------EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 92 AIYVISLTPNSEVKILKKIKIPLQESPTNCGF-----------EGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp EEEEEEECTTCCEEEEEEEECCCSSCCCSSCC-----------EEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred cEEEEEcCCCCeeeeeeeeccccccccccCCc-----------ceEEEeCCCCEEEEEECcCCceEEEE
Confidence 8888876554432 2232111000001111 57999999877764 33 4444444
No 284
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=85.59 E-value=26 Score=33.49 Aligned_cols=112 Identities=10% Similarity=-0.030 Sum_probs=70.7
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEe-CCCe
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGT-IEGK 124 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs-~DGt 124 (358)
....+++.+.+..|..+-...++|.+.++.....+. ++..+. ...+.|++.|.++ ++.+-. ..+.
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~------------l~~~~~-~~P~~iavdp~~g~ly~td~~~~~~ 226 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKT------------LFRENG-SKPRAIVVDPVHGFMYWTDWGTPAK 226 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEE------------EEECSS-CCEEEEEEETTTTEEEEEECSSSCC
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCceEE------------EEeCCC-CCcceEEEecccCeEEEEeCCCCCE
Confidence 457889988766777776667889999887532111 111111 3578999999765 444432 2478
Q ss_pred EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCC
Q psy2085 125 VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEI 188 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~t 188 (358)
|...|+........+.... ..|+.|++++++..|+-+| .|...|.+.
T Consensus 227 I~~~~~dG~~~~~~~~~~l-----------------~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 227 IKKGGLNGVDIYSLVTENI-----------------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp EEEEETTSCSCEEEECSSC-----------------SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEEeCCCCccEEEEECCC-----------------CceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 8888875433322222111 1227899999988888766 788888764
No 285
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=85.08 E-value=5.7 Score=40.07 Aligned_cols=112 Identities=9% Similarity=-0.033 Sum_probs=65.1
Q ss_pred EeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEE-------cCCCC-EEEE
Q psy2085 48 STSVRISP-DGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAI-------NPVHQ-LICV 118 (358)
Q Consensus 48 v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~-------np~~~-llas 118 (358)
...++|+| ++..|+++-.....|++.|+.+..++..... +.......+.|+| ++++. ++++
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~----------~~~~~~~p~~ia~~~~~~~~d~~G~~lyva 210 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNI----------NTIPTNRIRSIAFNKKIEGYADEAEYMIVA 210 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECC----------TTSSCSBEEEEEECCCBTTTBCTTCEEEEE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEcc----------CccccCCCcEEEEeecccccCCCCCEEEEE
Confidence 56899999 5666777655556899999886543311110 0000135789999 99998 5555
Q ss_pred EeCCCe------EEEEeCCC-Ccee-----EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceE
Q psy2085 119 GTIEGK------VEAWDPRM-KVKA-----GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQ 182 (358)
Q Consensus 119 Gs~DGt------V~iWD~Rs-~~~i-----~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IK 182 (358)
...++. |.+.+... +... ..+..-. .|..++.+|++..|+-+| .|.
T Consensus 211 d~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~------------------~p~giavdp~~g~LYvtd~~~g~V~ 272 (496)
T 3kya_A 211 IDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYK------------------QCNGATIHPINGELYFNSYEKGQVF 272 (496)
T ss_dssp ECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEES------------------CCCCEEECTTTCCEEEEETTTTEEE
T ss_pred eCCCCCcccCceEEEEecCCCCceeecccceeeccCC------------------CceEEEEcCCCCeEEEEECCCCEEE
Confidence 444322 56666333 1211 1221111 126789999666666433 788
Q ss_pred EEECC
Q psy2085 183 AWTKE 187 (358)
Q Consensus 183 IWD~~ 187 (358)
.+|+.
T Consensus 273 r~d~~ 277 (496)
T 3kya_A 273 RLDLV 277 (496)
T ss_dssp EECHH
T ss_pred EEecc
Confidence 88987
No 286
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=85.00 E-value=25 Score=32.81 Aligned_cols=111 Identities=10% Similarity=0.037 Sum_probs=70.1
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEeCCCeE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV-HQLICVGTIEGKV 125 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~-~~llasGs~DGtV 125 (358)
....++|.+.++.|..+-...++|..+++....... ++..+. ...+.+++.+. +.+..+-...+.|
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~------------~~~~~~-~~p~glavd~~~g~ly~~d~~~~~I 140 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE------------VVSTGL-ESPGGLAVDWVHDKLYWTDSGTSRI 140 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE------------EECSSC-SCCCEEEEETTTTEEEEEETTTTEE
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceE------------EEeCCC-CCccEEEEecCCCeEEEEcCCCCeE
Confidence 467899998888888776677889999987532110 111111 34578999875 4566777778899
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-----ceEEEECC
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-----DDQAWTKE 187 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-----~IKIWD~~ 187 (358)
.+.|+........+..... .|..|+++|.+..|+-+| .|...+++
T Consensus 141 ~~~~~dG~~~~~l~~~~l~-----------------~P~~iavdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 141 EVANLDGAHRKVLLWQSLE-----------------KPRAIALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp EEEETTSCSCEEEECTTCS-----------------CEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EEEcCCCCceEEEEeCCCC-----------------CcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence 9999865443322322111 127788998777777554 34455554
No 287
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=84.68 E-value=7.1 Score=36.83 Aligned_cols=86 Identities=15% Similarity=0.181 Sum_probs=46.2
Q ss_pred ceeEEEE-eeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-
Q psy2085 35 RIELIQD-FEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV- 112 (358)
Q Consensus 35 rIeliqd-fe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~- 112 (358)
+++++.+ +..| ..|+|.|||++|+++ ...++|++++... ... ....+...+ . .....+.+.|+++|+
T Consensus 9 ~~~~va~~l~~P---~~i~~~pdG~~l~V~-e~~G~i~~~~~~g-~~~-~~~~~~~~v----~-~~g~~g~~gia~~pdf 77 (353)
T 2g8s_A 9 NVEVLQDKLDHP---WALAFLPDNHGMLIT-LRGGELRHWQAGK-GLS-APLSGVPDV----W-AHGQGGLLDVVLAPDF 77 (353)
T ss_dssp EEEEEEEEESSE---EEEEECSTTCCEEEE-ETTTEEEEEETTT-EEC-CCCBSCCCC----C-CSTTCSEEEEEECTTH
T ss_pred EEEEEECCCCCc---EEEEEcCCCCEEEEE-eCCceEEEEeCCC-cee-eEecCCccc----c-cCCCCCceeEEECCCC
Confidence 4555544 4444 789999999944444 3578999998532 111 000000000 0 111156799999995
Q ss_pred ---CCEEEEEeC-------CCeEEEEeCC
Q psy2085 113 ---HQLICVGTI-------EGKVEAWDPR 131 (358)
Q Consensus 113 ---~~llasGs~-------DGtV~iWD~R 131 (358)
+.+.++-+. ...|..|++.
T Consensus 78 ~~~g~lYv~~~~~~~~g~~~~~v~r~~~~ 106 (353)
T 2g8s_A 78 AQSRRIWLSYSEVGDDGKAGTAVGYGRLS 106 (353)
T ss_dssp HHHCEEEEEEEEECSSSCEEEEEEEEEEC
T ss_pred CCCCEEEEEEeCCCCCCCceeEEEEEEEC
Confidence 445555433 2256566654
No 288
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=84.24 E-value=16 Score=34.19 Aligned_cols=70 Identities=14% Similarity=0.053 Sum_probs=41.3
Q ss_pred CCEeEEEEcCC---CCEEEEEEecC-----CeEEEEEcCCCceeeeeeccCceEEEEEee--cCCCCCeeEEEEcCCCCE
Q psy2085 46 GVSTSVRISPD---GQYVLSTGIYK-----PRVRCYETDNLSMKFERCFDSEVVTFEILS--DDYSSELNSIAINPVHQL 115 (358)
Q Consensus 46 ~~v~~v~~SpD---G~~LlatG~~d-----~~IrvwDl~~lslk~~r~~d~e~v~f~~LS--~D~s~~In~i~~np~~~l 115 (358)
.....|+|+|| +.+|.++-+.. ++|..|++....+.- .+.+ +.-+. ....+..+.|+|.|++.|
T Consensus 75 ~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~-----~~~l-~~~~p~~~~~~h~~~~l~~~pdG~L 148 (352)
T 2ism_A 75 SGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVL-----DRVV-LDGIPARPHGLHSGGRIAFGPDGML 148 (352)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEE-----EEEE-EEEECCCTTCCCCCCCEEECTTSCE
T ss_pred CCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCc-----eEEE-EEeCCCCCCCCcCCceEEECCCCCE
Confidence 46789999999 66676665543 678888876432210 0111 11121 111134578999999988
Q ss_pred EEEEeC
Q psy2085 116 ICVGTI 121 (358)
Q Consensus 116 lasGs~ 121 (358)
.++-++
T Consensus 149 yv~~G~ 154 (352)
T 2ism_A 149 YVTTGE 154 (352)
T ss_dssp EEECCC
T ss_pred EEEECC
Confidence 777543
No 289
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=83.20 E-value=28 Score=33.24 Aligned_cols=127 Identities=7% Similarity=-0.058 Sum_probs=73.5
Q ss_pred EeEEEE---cCCCCEEEEEEe------------cCCeEEEEEcC---CCceeeeeeccCceEEEEEeec-CCCCCeeEEE
Q psy2085 48 STSVRI---SPDGQYVLSTGI------------YKPRVRCYETD---NLSMKFERCFDSEVVTFEILSD-DYSSELNSIA 108 (358)
Q Consensus 48 v~~v~~---SpDG~~LlatG~------------~d~~IrvwDl~---~lslk~~r~~d~e~v~f~~LS~-D~s~~In~i~ 108 (358)
+..|.| -|+|+.++++-. -+..|..||+. +....+.-.+....-.+.-++. .+ ...|.++
T Consensus 65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~-~~~nDva 143 (334)
T 2p9w_A 65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRP-FGVVQSA 143 (334)
T ss_dssp EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCC-EEEEEEE
T ss_pred eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccc-cCCceeE
Confidence 589999 688876543210 15679999988 4332221111000000000000 01 3589999
Q ss_pred EcCCCCEEEEEeCC-CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec---ceEEE
Q psy2085 109 INPVHQLICVGTIE-GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD---DDQAW 184 (358)
Q Consensus 109 ~np~~~llasGs~D-GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD---~IKIW 184 (358)
+.++|+..++++.- +.|-..|+.-. .+..+........ ..-|+ +.|+++|+|..|+..+ .+..+
T Consensus 144 vD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~---~~~G~--------nGIv~~pdg~~Liv~~~~g~L~~f 211 (334)
T 2p9w_A 144 QDRDGNSYVAFALGMPAIARVSADGK-TVSTFAWESGNGG---QRPGY--------SGITFDPHSNKLIAFGGPRALTAF 211 (334)
T ss_dssp ECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEECCCCSS---SCCSC--------SEEEEETTTTEEEEESSSSSEEEE
T ss_pred ECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCCCcc---cccCc--------ceEEEeCCCCEEEEEcCCCeEEEE
Confidence 99999999999988 88888887644 3333321111100 00111 7799999999888754 67777
Q ss_pred ECC
Q psy2085 185 TKE 187 (358)
Q Consensus 185 D~~ 187 (358)
|+.
T Consensus 212 D~~ 214 (334)
T 2p9w_A 212 DVS 214 (334)
T ss_dssp ECS
T ss_pred cCC
Confidence 865
No 290
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=82.93 E-value=17 Score=37.68 Aligned_cols=117 Identities=12% Similarity=0.083 Sum_probs=69.7
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEA 127 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~i 127 (358)
|.++...++|+..+ |+...-|.+||..+...+ ..... . . ...|.+|...+++.+.+. +.++-|.+
T Consensus 175 i~~i~~d~~g~lwi--gt~~~Gl~~~~~~~~~~~--~~~~~-------~-~--~~~i~~i~~d~~g~lwig-t~~~Gl~~ 239 (795)
T 4a2l_A 175 IASTLYRQGDQIYI--GTSTDGLYTYSITQKTFE--KVIPI-------L-G--TKQIQAILQQSPTRIWVA-TEGAGLFL 239 (795)
T ss_dssp CEEEEEEETTEEEE--EESSSCEEEEETTTCCEE--ECC--------------CCCEEEEEEEETTEEEEE-EBSSCEEE
T ss_pred eEEEEECCCCCEEE--EECCCCEEEEeCCCCeEE--EecCC-------C-C--CCeeEEEEEcCCCCEEEE-ECCCCeEE
Confidence 78888888887554 344445889997654322 11000 0 0 146888888887776664 54444888
Q ss_pred EeCCCCceeEEEeCCCCccc-cccCCCccccccCCCceeeEEcCCCCEEEEec-ceEEEECCCCc
Q psy2085 128 WDPRMKVKAGTLDCAFNCIS-NERDTEEKEGKASSDESSEEEEEEEEEEESSD-DDQAWTKEIKK 190 (358)
Q Consensus 128 WD~Rs~~~i~~L~~~~~~v~-~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-~IKIWD~~tG~ 190 (358)
||+.+++..........+.. ....+ .+|...++|...++++ -|.+||..+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~~~~i-----------~~i~~d~~g~lWigt~~Gl~~~~~~~~~ 293 (795)
T 4a2l_A 240 INPKTKEIKNYLHSPSNPKSISSNYI-----------RSLAMDSQNRLWIGTFNDLNIYHEGTDS 293 (795)
T ss_dssp EETTTTEEEEECCCTTCTTSCSCSBE-----------EEEEECTTSCEEEEESSCEEEEETTTTE
T ss_pred EeCCCCeEEEeecCCCCccccCCCeE-----------EEEEEcCCCCEEEEeCChhheEcCCCCe
Confidence 99887754322211100000 00011 6788888888888777 88889987665
No 291
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=82.26 E-value=31 Score=35.24 Aligned_cols=103 Identities=7% Similarity=0.032 Sum_probs=63.8
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEeCCCeE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV-HQLICVGTIEGKV 125 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~-~~llasGs~DGtV 125 (358)
....|+|++.+..|+.+-...++|..+++...... + .++..+ ....+.|++.+. +.+..+-+..+.|
T Consensus 41 ~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~-~----------~v~~~~-~~~P~GlAvD~~~~~ly~~d~~~~~I 108 (619)
T 3s94_A 41 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV-Q----------NVVVSG-LLSPDGLACDWLGEKLYWTDSETNRI 108 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC-----C-E----------EEECSS-CSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred ceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCce-E----------EEEeCC-CCCcCeEEEEecCCEEEEEeCCCCEE
Confidence 35788999988888877656678988888653110 0 011111 145789999985 4577777788999
Q ss_pred EEEeCCCCceeEEEe-CCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec
Q psy2085 126 EAWDPRMKVKAGTLD-CAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD 179 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~-~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD 179 (358)
.+-|+....+ .+|. ... ..|..|+++|.+..|+-+|
T Consensus 109 ~v~~~dG~~~-~~l~~~~l-----------------~~P~~Iavdp~~g~ly~tD 145 (619)
T 3s94_A 109 EVSNLDGSLR-KVLFWQEL-----------------DQPRAIALDPSSGFMYWTD 145 (619)
T ss_dssp EEEETTSCSC-EEEECSSC-----------------SCCCCEEEETTTTEEEEEE
T ss_pred EEEECCCCCE-EEEEeCCC-----------------CCCceEEEecCCCeEEEec
Confidence 9999865443 3332 111 1126788888766666444
No 292
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=82.26 E-value=24 Score=39.20 Aligned_cols=87 Identities=9% Similarity=0.106 Sum_probs=55.0
Q ss_pred EEEEeeCCC--CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC---
Q psy2085 38 LIQDFEMPG--VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV--- 112 (358)
Q Consensus 38 liqdfe~~~--~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~--- 112 (358)
+++.+..|. .|..++... .+|+.+ + .+.|.++++.+..+.... . .-+ .+.|.|+++.|.
T Consensus 504 ~~~~w~~p~~~~I~~As~n~--~~vvva-~-g~~l~~fel~~~~L~~~~-------~-~~l----~~evscl~i~~~~~~ 567 (1158)
T 3ei3_A 504 LVSEWKEPQAKNISVASCNS--SQVVVA-V-GRALYYLQIHPQELRQIS-------H-TEM----EHEVACLDITPLGDS 567 (1158)
T ss_dssp EEEEECCTTCCCCCEEEECS--SEEEEE-E-TTEEEEEEEETTEEEEEE-------E-EEC----SSCEEEEECCCCSSS
T ss_pred EEEEEECCCCCEEEEEEeCC--CEEEEE-E-CCEEEEEEeeCCceeeec-------c-cCC----CCceEEEEeecCCCC
Confidence 577777764 355655543 345443 3 467888888754332110 0 111 156899999764
Q ss_pred ---CCEEEEEeC-CCeEEEEeCCCCceeEEEe
Q psy2085 113 ---HQLICVGTI-EGKVEAWDPRMKVKAGTLD 140 (358)
Q Consensus 113 ---~~llasGs~-DGtV~iWD~Rs~~~i~~L~ 140 (358)
...+|.|.+ |++|+|.++.+-+.+..-.
T Consensus 568 ~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~ 599 (1158)
T 3ei3_A 568 NGLSPLCAIGLWTDISARILKLPSFELLHKEM 599 (1158)
T ss_dssp TTCCSEEEEEETTTTEEEEEETTTCCEEEEEE
T ss_pred cccccEEEEEECCCCEEEEEECCCCCeEEEEE
Confidence 369999997 9999999998766655443
No 293
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=82.10 E-value=30 Score=31.58 Aligned_cols=113 Identities=10% Similarity=0.030 Sum_probs=68.6
Q ss_pred CEeEEEEcCCCCEEEEEEecC-CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCe
Q psy2085 47 VSTSVRISPDGQYVLSTGIYK-PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIEGK 124 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d-~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~DGt 124 (358)
.-+.+++.|++.+|+.+.... ++|..+++.....+. +.+.+. ..-|.|+++|+++ +..+-+..+.
T Consensus 121 ~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~------------~~~~~~-~~P~gla~d~~~~~lY~~D~~~~~ 187 (316)
T 1ijq_A 121 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS------------LVTENI-QWPNGITLDLLSGRLYWVDSKLHS 187 (316)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE------------EECSSC-SCEEEEEEETTTTEEEEEETTTTE
T ss_pred CcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEE------------EEECCC-CCceEEEEeccCCEEEEEECCCCe
Confidence 457899999888777765443 788888876422110 111111 4578999998765 5566667789
Q ss_pred EEEEeCCCCceeEEE-eCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCCCc
Q psy2085 125 VEAWDPRMKVKAGTL-DCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEIKK 190 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L-~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~tG~ 190 (358)
|...|+.... ..++ ..... ...|..|++. +..|+-+| .|..+|..+|+
T Consensus 188 I~~~d~dg~~-~~~~~~~~~~---------------~~~P~giav~--~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 188 ISSIDVNGGN-RKTILEDEKR---------------LAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp EEEEETTSCS-CEEEEECTTT---------------TSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEEecCCCc-eEEEeecCCc---------------cCCcEEEEEE--CCEEEEEECCCCeEEEEeCCCCc
Confidence 9999986433 2333 21110 0112567774 34555433 78888887776
No 294
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=81.96 E-value=40 Score=35.72 Aligned_cols=116 Identities=9% Similarity=0.013 Sum_probs=69.4
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC-CEEEEEeCCCe
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH-QLICVGTIEGK 124 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~-~llasGs~DGt 124 (358)
..+..|+|.+.+..|+.+-...++|..+++...... .... .++... ......|++.+.+ .|+.+-+..+.
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~------~~~~--~vi~~~-l~~P~GLAvD~~~~~LY~tD~~~~~ 494 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------SSYD--TVISRD-IQAPDGLAVDWIHSNIYWTDSVLGT 494 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------------CE--EEECSS-CSCCCEEEEETTTTEEEEEETTTTE
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCC------ccee--EEEecC-CCCcceeeeeecCCcEEEEecCCCe
Confidence 346788999977778777666778988888742110 0000 111111 1456789999876 57777778899
Q ss_pred EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-----ceEEEECC
Q psy2085 125 VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-----DDQAWTKE 187 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-----~IKIWD~~ 187 (358)
|.+.|+..+.....+..... .|..|+++|.+..|+-+| .|.+.+++
T Consensus 495 I~v~~ldG~~~~~l~~~~l~-----------------~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d 545 (791)
T 3m0c_C 495 VSVADTKGVKRKTLFRENGS-----------------KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 545 (791)
T ss_dssp EEEEETTSSSEEEEEECTTC-----------------CEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EEEEeCCCCeEEEEEeCCCC-----------------CcceEEEecCCCCEEEecCCCCCeEEEEecC
Confidence 99999875543333322111 126788888766666544 35555554
No 295
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=81.24 E-value=9.7 Score=41.28 Aligned_cols=41 Identities=10% Similarity=0.140 Sum_probs=35.9
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCC
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCA 142 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~ 142 (358)
..|.+++..++..++.+-+.|+++|+|++.+++++++.+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~ 276 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELS 276 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECC
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeeccc
Confidence 45788888888889999999999999999999999988753
No 296
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=80.71 E-value=4 Score=41.80 Aligned_cols=77 Identities=16% Similarity=0.205 Sum_probs=48.8
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe-CC---
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT-IE--- 122 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs-~D--- 122 (358)
.+.++.+.+||+.+++.|.....+.+||..+. ++....+.. .+ ..-.++++.+++.+++.|| .+
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~--~W~~~~~~~-------~~---R~~~s~~~~~dg~iyv~GG~~~~~~ 311 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSD--SWIPGPDMQ-------VA---RGYQSSATMSDGRVFTIGGSWSGGV 311 (656)
T ss_dssp SSCEEEECTTSCEEEECSSSTTCEEEEEGGGT--EEEECCCCS-------SC---CSSCEEEECTTSCEEEECCCCCSSS
T ss_pred ccccccCCCCCCEEEeCCCCCCceEEecCcCC--ceeECCCCC-------cc---ccccceEEecCCeEEEEeCcccCCc
Confidence 34567889999865544435568999998753 222211100 00 1113455667899999999 44
Q ss_pred --CeEEEEeCCCCce
Q psy2085 123 --GKVEAWDPRMKVK 135 (358)
Q Consensus 123 --GtV~iWD~Rs~~~ 135 (358)
..+++||+.+++-
T Consensus 312 ~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 312 FEKNGEVYSPSSKTW 326 (656)
T ss_dssp CCCCEEEEETTTTEE
T ss_pred ccccceEeCCCCCcc
Confidence 5799999988763
No 297
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=80.37 E-value=40 Score=32.38 Aligned_cols=117 Identities=15% Similarity=0.183 Sum_probs=69.2
Q ss_pred CCEeEEEE--cCC-CC-EEEEEEecCCeEEEEEcCC---Cce--eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEE
Q psy2085 46 GVSTSVRI--SPD-GQ-YVLSTGIYKPRVRCYETDN---LSM--KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLI 116 (358)
Q Consensus 46 ~~v~~v~~--SpD-G~-~LlatG~~d~~IrvwDl~~---lsl--k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ll 116 (358)
..+..+++ +|+ |+ |+++++ .++.+..|++.. ... +.-|. |.+ . +.+-.|.+.+..+.|
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~-k~G~~~q~~l~~~~~g~~~~~lVR~-------f~l-g----sq~EgcvvDd~~g~L 194 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTG-KEGEFEQYELKADKNGYISGKKVRA-------FKM-N----SQTEGMAADDEYGRL 194 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEEC-SSSEEEEEEEEECTTSCEEEEEEEE-------EEC-S----SCEEEEEEETTTTEE
T ss_pred CCeeEEEEEecCCCCcEEEEEEC-CCCeEEEEEEEeCCCCcccceEEEE-------ecC-C----CCcceEEEcCCCCeE
Confidence 34566777 884 54 677765 458999999842 211 11122 221 1 468889999998888
Q ss_pred EEEeCCCeEEEEeCC--C---CceeEEEeCCCCccccccCCCccccccCCCceeeEE--cCCCC-EEE-Ee--c-ceEEE
Q psy2085 117 CVGTIEGKVEAWDPR--M---KVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEE--EEEEE-EEE-SS--D-DDQAW 184 (358)
Q Consensus 117 asGs~DGtV~iWD~R--s---~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~f--s~d~~-~ll-Sa--D-~IKIW 184 (358)
..|-+|.-|-.+|.+ + ++.+..+... .. . ..+ ..|+. .++++ +|+ |+ + +.-||
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g-~l-~--aDv-----------EGLai~~~~~g~gyLivSsQG~~s~~Vy 259 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGR-HL-T--RDI-----------EGLTIYYAADGKGYLMASSQGNSSYAIY 259 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSSS-SB-C--SCE-----------EEEEEEECGGGCEEEEEEEGGGTEEEEE
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecCC-cc-c--cCc-----------ceEEEEecCCCCEEEEEEcCCCCEEEEE
Confidence 888998666666744 2 4445444321 00 0 011 33444 56666 555 53 4 99999
Q ss_pred ECC-CCc
Q psy2085 185 TKE-IKK 190 (358)
Q Consensus 185 D~~-tG~ 190 (358)
|.. +.+
T Consensus 260 dr~~~~~ 266 (355)
T 3amr_A 260 DRQGKNK 266 (355)
T ss_dssp ESSTTCC
T ss_pred ECCCCCc
Confidence 997 443
No 298
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=79.24 E-value=20 Score=33.80 Aligned_cols=84 Identities=17% Similarity=0.178 Sum_probs=47.6
Q ss_pred ceeEEEE-eeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-
Q psy2085 35 RIELIQD-FEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV- 112 (358)
Q Consensus 35 rIeliqd-fe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~- 112 (358)
+++++.+ +.. -..++|.|||+.+ ++ ..+++|+++|.. .. .. +..+.+. .....+.+.|+++|+
T Consensus 20 ~~~~va~~l~~---P~~ia~~pdG~l~-V~-e~~g~I~~~d~~-G~-~~-------~~~~~v~-~~g~~g~~gia~~pdf 84 (354)
T 3a9g_A 20 KISEVASDLEV---PWSIAPLGGGRYL-VT-ERPGRLVLISPS-GK-KL-------VASFDVA-NVGEAGLLGLALHPEF 84 (354)
T ss_dssp EEEEEECSCSC---EEEEEEEETTEEE-EE-ETTTEEEEECSS-CE-EE-------EEECCCC-CSTTCSEEEEEECTTT
T ss_pred EEEEEeCCCCC---CeEEEEcCCCeEE-EE-eCCCEEEEEeCC-Cc-eE-------eecccee-ecCCCceeeEEeCCCC
Confidence 5566554 333 4789999999844 44 456899988732 21 10 0000001 111156899999997
Q ss_pred ---CCEEEEEeC---C----CeEEEEeCCCC
Q psy2085 113 ---HQLICVGTI---E----GKVEAWDPRMK 133 (358)
Q Consensus 113 ---~~llasGs~---D----GtV~iWD~Rs~ 133 (358)
+.+.++-+. + +.|..|++...
T Consensus 85 ~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~ 115 (354)
T 3a9g_A 85 PKKSWVYLYASYFAEGGHIRNRVIRGRLDGS 115 (354)
T ss_dssp TTSCEEEEEEEEECGGGCEEEEEEEEEECSS
T ss_pred CcCCEEEEEEeccCCCCCcceEEEEEEECCC
Confidence 445555442 3 56777776543
No 299
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=78.82 E-value=41 Score=31.04 Aligned_cols=110 Identities=12% Similarity=-0.002 Sum_probs=69.2
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCE-EEEE-eCCCeE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQL-ICVG-TIEGKV 125 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~l-lasG-s~DGtV 125 (358)
...+++.+.+..|..+-...++|.++++.....+. ++..+. ..-+.|++.|.++. +.+- +..+.|
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~------------l~~~~~-~~P~giavdp~~g~ly~td~~~~~~I 147 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV------------LFWQEL-DQPRAIALDPSSGFMYWTDWGEVPKI 147 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE------------EECSSC-SSEEEEEEEGGGTEEEEEECSSSCEE
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE------------EEeCCC-CCccEEEEeCCCCEEEEEecCCCCEE
Confidence 46788988777777776667799999987532111 111111 45689999997554 4443 236788
Q ss_pred EEEeCCCCceeEEE-eCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCC
Q psy2085 126 EAWDPRMKVKAGTL-DCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEI 188 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L-~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~t 188 (358)
...|+.-.. ..++ .... ..|+.|+|++++..|+-+| .|..+|.+.
T Consensus 148 ~r~~~dG~~-~~~~~~~~l-----------------~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 148 ERAGMDGSS-RFIIINSEI-----------------YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp EEEETTSCS-CEEEECSSC-----------------SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEEcCCCC-eEEEEECCC-----------------CCccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence 888875332 2222 2111 1227899999888888666 788888763
No 300
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=77.84 E-value=48 Score=31.31 Aligned_cols=112 Identities=13% Similarity=0.065 Sum_probs=68.8
Q ss_pred CEeEEEEcCCCCEEEEEEecC-CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCe
Q psy2085 47 VSTSVRISPDGQYVLSTGIYK-PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIEGK 124 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d-~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~DGt 124 (358)
.-+.|++.|++.+|..+-... ++|..+++.....+. +++.+. ..-|.|+|+|+++ +..+-+..+.
T Consensus 203 ~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~------------~~~~~~-~~PnGlavd~~~~~lY~aD~~~~~ 269 (386)
T 3v65_B 203 KPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI------------IADTHL-FWPNGLTIDYAGRRMYWVDAKHHV 269 (386)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE------------EECSSC-SCEEEEEEEGGGTEEEEEETTTTE
T ss_pred CCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEE------------EEECCC-CCeeeEEEeCCCCEEEEEECCCCE
Confidence 358899999888887775444 788888876432110 111111 3468999998654 6666667889
Q ss_pred EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCCCc
Q psy2085 125 VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEIKK 190 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~tG~ 190 (358)
|..+|+........+.... ..|..|++. +..|+-+| .|...|..+|+
T Consensus 270 I~~~d~dG~~~~~~~~~~~-----------------~~P~giav~--~~~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 270 IERANLDGSHRKAVISQGL-----------------PHPFAITVF--EDSLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp EEEECTTSCSCEEEECSSC-----------------SSEEEEEEE--TTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEEeCCCCeeEEEEECCC-----------------CCceEEEEE--CCEEEEeeCCCCeEEEEECCCCc
Confidence 9999986543333332211 112567773 33455433 77788877776
No 301
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=77.73 E-value=47 Score=31.14 Aligned_cols=72 Identities=15% Similarity=0.183 Sum_probs=40.4
Q ss_pred CCEeEEEEcCC---CCEEEEEEec---C----CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCE
Q psy2085 46 GVSTSVRISPD---GQYVLSTGIY---K----PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQL 115 (358)
Q Consensus 46 ~~v~~v~~SpD---G~~LlatG~~---d----~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~l 115 (358)
.....|+|+|| +.+|.++-+. + .+|..|++........ +.+++ +.-+.....+..+.|+|.|++.|
T Consensus 73 ~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~---~~~~l-~~~~~~~~~h~~~~l~~~pDG~L 148 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLK---EVKTL-IDGIPGAYIHNGGRIRFGPDGML 148 (354)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEE---EEEEE-EEEEECCSSCCCCCEEECTTSCE
T ss_pred CceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcC---ccEEE-EEcCCCCCCcCCceEEECCCCcE
Confidence 45789999998 5566665443 2 5677777664311111 01111 11121111134578999999998
Q ss_pred EEEEeC
Q psy2085 116 ICVGTI 121 (358)
Q Consensus 116 lasGs~ 121 (358)
.++-++
T Consensus 149 yvt~G~ 154 (354)
T 3a9g_A 149 YITTGD 154 (354)
T ss_dssp EEECCC
T ss_pred EEEECC
Confidence 877554
No 302
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=77.40 E-value=44 Score=34.49 Aligned_cols=118 Identities=16% Similarity=0.126 Sum_probs=72.5
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
..|.++...++|...++| ..+-|.+||..+...+ .-..... ++ ...|++|...+++.+.++ +.+|.|
T Consensus 495 ~~i~~i~~d~~g~lWigt--~~~Gl~~~~~~~~~~~--~~~~~~~-----l~---~~~i~~i~~d~~g~lWi~-T~~Glv 561 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWIGT--FGGGVGIYTPDMQLVR--KFNQYEG-----FC---SNTINQIYRSSKGQMWLA-TGEGLV 561 (781)
T ss_dssp SCEEEEEECTTCCEEEEE--SSSCEEEECTTCCEEE--EECTTTT-----CS---CSCEEEEEECTTSCEEEE-ETTEEE
T ss_pred ceeEEEEEcCCCCEEEEE--cCCCEEEEeCCCCeEE--EccCCCC-----CC---CCeeEEEEECCCCCEEEE-ECCCce
Confidence 468999999999866544 3234777887653321 1110000 11 146899999888887765 447877
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-ceEEEECCCCc
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-DDQAWTKEIKK 190 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-~IKIWD~~tG~ 190 (358)
..||+.+++ ...+..... .. ...+ .+|...++|...++++ -|-.+|..+++
T Consensus 562 ~~~d~~~~~-~~~~~~~~g-l~-~~~i-----------~~i~~d~~g~lW~~t~~Gl~~~~~~~~~ 613 (781)
T 3v9f_A 562 CFPSARNFD-YQVFQRKEG-LP-NTHI-----------RAISEDKNGNIWASTNTGISCYITSKKC 613 (781)
T ss_dssp EESCTTTCC-CEEECGGGT-CS-CCCC-----------CEEEECSSSCEEEECSSCEEEEETTTTE
T ss_pred EEECCCCCc-EEEccccCC-CC-CceE-----------EEEEECCCCCEEEEcCCceEEEECCCCc
Confidence 999998775 333332111 00 0011 5678888888888877 77778887665
No 303
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=76.56 E-value=4.8 Score=41.97 Aligned_cols=110 Identities=12% Similarity=-0.032 Sum_probs=63.9
Q ss_pred eEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeC-CCeEE
Q psy2085 49 TSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTI-EGKVE 126 (358)
Q Consensus 49 ~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~-DGtV~ 126 (358)
..|++.+.+..|..+-...++|.++++.....+. ++..+. ...+.|++.|.++ ++.+... .+.|.
T Consensus 456 ~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~------------l~~~~~-~~P~giavDp~~g~ly~td~~~~~~I~ 522 (699)
T 1n7d_A 456 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKT------------LFREQG-SKPRAIVVDPVHGFMYWTDWGTPAKIK 522 (699)
T ss_dssp CCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEE------------ECCCSS-CCCCCEECCSSSSCCEECCCSSSCCEE
T ss_pred ceEEEEeeCCcEEEEeccCCeEEEEecCCCceEE------------EEeCCC-CCcceEEEccCCCcEEEcccCCCCeEE
Confidence 4578886665566665556789998876432211 111111 3457889999654 4544332 37888
Q ss_pred EEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCC
Q psy2085 127 AWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEI 188 (358)
Q Consensus 127 iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~t 188 (358)
..++.... ..++-.. .+ ..|+.|+|+|++..|+-+| .|.+.|...
T Consensus 523 ~~~~dG~~-~~~l~~~--~l--------------~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 523 KGGLNGVD-IYSLVTE--NI--------------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp BCCSSSCC-CCEESCS--SC--------------SSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred EEeCCCCC-eeEEEeC--CC--------------CCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 88775332 2222110 00 1127899999888787655 788888763
No 304
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=75.97 E-value=7.6 Score=40.47 Aligned_cols=113 Identities=10% Similarity=0.060 Sum_probs=65.6
Q ss_pred EeEEEEcCCCCEEEEEEecC-CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC-CEEEEEeCCCeE
Q psy2085 48 STSVRISPDGQYVLSTGIYK-PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH-QLICVGTIEGKV 125 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d-~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~-~llasGs~DGtV 125 (358)
.+.|++.|++.+|+.|-... ++|.++++.....+. ++..+. ..-|.|+|+|++ .|+.+-+..+.|
T Consensus 498 P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~------------l~~~~l-~~PnGlavd~~~~~LY~aD~~~~~I 564 (699)
T 1n7d_A 498 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS------------LVTENI-QWPNGITLDLLSGRLYWVDSKLHSI 564 (699)
T ss_dssp CCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE------------ESCSSC-SSCCCEEECTTTCCEEEEETTTTEE
T ss_pred cceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE------------EEeCCC-CCccEEEEeccCCEEEEEecCCCeE
Confidence 36788999777666654322 678777765321110 111111 346889999875 566666778899
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCCCc
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEIKK 190 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~tG~ 190 (358)
..+|+........+..... . ..|..|++..+ .|+-+| .|..+|..+|+
T Consensus 565 ~~~d~dG~~~~~~~~~~~~-~--------------~~P~glavd~~--~lywtd~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 565 SSIDVNGGNRKTILEDEKR-L--------------AHPFSLAVFED--KVFWTDIINEAIFSANRLTGS 616 (699)
T ss_dssp EEECSSSSCCEEECCCSSS-C--------------SSCCCCEEETT--EEEEECSTTTCEEEEETTTEE
T ss_pred EEEccCCCceEEEEecCCc-C--------------CCceEeEEECC--EEEEEeCCCCeEEEEEccCCC
Confidence 9999864333222221100 0 11245666543 555433 88889988887
No 305
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=75.50 E-value=37 Score=33.21 Aligned_cols=77 Identities=19% Similarity=0.172 Sum_probs=40.1
Q ss_pred ceeEEEE-eeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-
Q psy2085 35 RIELIQD-FEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV- 112 (358)
Q Consensus 35 rIeliqd-fe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~- 112 (358)
+++++.+ +.+ -..++|.|||+.++ +-...++|.+++..+........+. .+ +..+....++..|+|+|+
T Consensus 18 ~~~~~a~~l~~---P~~~a~~pdG~l~V-~e~~gg~I~~~~~~~g~~~~~~~~~-~~----~~~~~g~~Gllgia~~Pdf 88 (454)
T 1cru_A 18 DKKVILSNLNK---PHALLWGPDNQIWL-TERATGKILRVNPESGSVKTVFQVP-EI----VNDADGQNGLLGFAFHPDF 88 (454)
T ss_dssp CEEEEECCCSS---EEEEEECTTSCEEE-EETTTCEEEEECTTTCCEEEEEECT-TC----CCCTTSSCSEEEEEECTTT
T ss_pred EEEEEECCCCC---ceEEEEcCCCcEEE-EEcCCCEEEEEECCCCcEeEEecCC-cc----ccccCCCCceeEEEECCCc
Confidence 4555553 333 47999999999654 4322246888875432211000000 00 001112267889999995
Q ss_pred ---CCEEEEEe
Q psy2085 113 ---HQLICVGT 120 (358)
Q Consensus 113 ---~~llasGs 120 (358)
+.+.++-+
T Consensus 89 ~~~g~lYv~~s 99 (454)
T 1cru_A 89 KNNPYIYISGT 99 (454)
T ss_dssp TTSCEEEEEEE
T ss_pred CcCCEEEEEEe
Confidence 44544443
No 306
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=74.55 E-value=8.9 Score=42.29 Aligned_cols=41 Identities=10% Similarity=0.140 Sum_probs=35.4
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCC
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCA 142 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~ 142 (358)
..|.+++..++..++.+-+.|+++|+||+.+++++++.+..
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL~ 278 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELS 278 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEECC
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeechh
Confidence 45677777888889999999999999999999999988753
No 307
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=73.67 E-value=70 Score=31.21 Aligned_cols=73 Identities=15% Similarity=0.242 Sum_probs=39.6
Q ss_pred CCEeEEEEcCC---CCEEEEEEec------------CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEc
Q psy2085 46 GVSTSVRISPD---GQYVLSTGIY------------KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAIN 110 (358)
Q Consensus 46 ~~v~~v~~SpD---G~~LlatG~~------------d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~n 110 (358)
+....|+|+|| +.+|.++-+. ...|.-|++.....+.. ...+-+..+.....+..+.|+|.
T Consensus 77 ~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~----~~~~i~~~~p~~~~H~~~~l~f~ 152 (454)
T 1cru_A 77 NGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLE----KPVDLLAGLPSSKDHQSGRLVIG 152 (454)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEE----EEEEEEEEECCCSSCCEEEEEEC
T ss_pred CceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcC----CcEEEEEcCCCCCCCCCCeEeEC
Confidence 45669999996 5566665443 12455555432211111 11111111222112568999999
Q ss_pred CCCCEEEEEeCC
Q psy2085 111 PVHQLICVGTIE 122 (358)
Q Consensus 111 p~~~llasGs~D 122 (358)
|++.|.++-++.
T Consensus 153 pDG~Lyv~~Gd~ 164 (454)
T 1cru_A 153 PDQKIYYTIGDQ 164 (454)
T ss_dssp TTSCEEEEECCT
T ss_pred CCCeEEEEECCC
Confidence 999988776653
No 308
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=73.12 E-value=86 Score=32.01 Aligned_cols=111 Identities=7% Similarity=-0.019 Sum_probs=68.3
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEE-eCCCe
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVG-TIEGK 124 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasG-s~DGt 124 (358)
....+++.+.+..|..+-...++|.+.++.....+. ++..+. ..-+.|++.|..+ ++.+- +..+.
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~------------l~~~~l-~~P~~iavdp~~G~lY~tD~g~~~~ 147 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV------------LVWKDL-DSPRALALDPAEGFMYWTEWGGKPK 147 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE------------EECSSC-CCEEEEEEETTTTEEEEEECSSSCE
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE------------EEeCCC-CCcccEEEccCCCeEEEeCCCCCCE
Confidence 356889988888787776667899999987532111 011111 3568999999655 44543 33678
Q ss_pred EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCC
Q psy2085 125 VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEI 188 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~t 188 (358)
|...++........+..-. .|+.|++++++..|+-+| .|...|.+.
T Consensus 148 I~r~~~dG~~~~~l~~~~~------------------~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG 197 (628)
T 4a0p_A 148 IDRAAMDGSERTTLVPNVG------------------RANGLTIDYAKRRLYWTDLDTNLIESSNMLG 197 (628)
T ss_dssp EEEEETTSCSCEEEECSCS------------------SEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEEeCCCCceEEEECCCC------------------CcceEEEccccCEEEEEECCCCEEEEEcCCC
Confidence 8888875443322222111 126788888777777655 666667653
No 309
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=72.04 E-value=67 Score=33.05 Aligned_cols=118 Identities=13% Similarity=0.010 Sum_probs=68.5
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
..|.++...++|...+ |++.+-|.+||..+.. +.+..... + ....|.+|...+++.+.+. +. +-|
T Consensus 407 ~~v~~i~~d~~g~lWi--gt~~~Gl~~~~~~~~~--~~~~~~~~------~---~~~~v~~i~~d~~g~lwig-t~-~Gl 471 (781)
T 3v9f_A 407 NSVLCSLKDSEGNLWF--GTYLGNISYYNTRLKK--FQIIELEK------N---ELLDVRVFYEDKNKKIWIG-TH-AGV 471 (781)
T ss_dssp SBEEEEEECTTSCEEE--EETTEEEEEECSSSCE--EEECCSTT------T---CCCCEEEEEECTTSEEEEE-ET-TEE
T ss_pred cceEEEEECCCCCEEE--EeccCCEEEEcCCCCc--EEEeccCC------C---CCCeEEEEEECCCCCEEEE-EC-Cce
Confidence 4688999988998554 4565668888876533 22211100 0 0146888888888876654 44 558
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCCCc
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEIKK 190 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~tG~ 190 (358)
.++|+.+++............ ....+ .+|...++|...++ .+ -+..||..+++
T Consensus 472 ~~~~~~~~~~~~~~~~~~~~~-~~~~i-----------~~i~~d~~g~lWigt~~~Gl~~~~~~~~~ 526 (781)
T 3v9f_A 472 FVIDLASKKVIHHYDTSNSQL-LENFV-----------RSIAQDSEGRFWIGTFGGGVGIYTPDMQL 526 (781)
T ss_dssp EEEESSSSSCCEEECTTTSSC-SCSCE-----------EEEEECTTCCEEEEESSSCEEEECTTCCE
T ss_pred EEEeCCCCeEEecccCccccc-cccee-----------EEEEEcCCCCEEEEEcCCCEEEEeCCCCe
Confidence 889998776433222111000 00011 66777777876665 34 66667776554
No 310
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=71.34 E-value=62 Score=29.57 Aligned_cols=73 Identities=5% Similarity=0.048 Sum_probs=46.0
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCC-CCccccccCCCccccccCCCceeeEEcCCCCEEEEe-c
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCA-FNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS-D 179 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~-~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa-D 179 (358)
..+..+++.|++.+++.|...+..+-+|.. +..-..+... ...+ ..|.+++++..++.. +
T Consensus 163 ~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G~tW~~~~~~~~~~~-----------------~~~~~~~~g~~~~~~~~ 224 (327)
T 2xbg_A 163 GVMRNLNRSPSGEYVAVSSRGSFYSTWEPG-QTAWEPHNRTTSRRL-----------------HNMGFTPDGRLWMIVNG 224 (327)
T ss_dssp CCEEEEEECTTSCEEEEETTSSEEEEECTT-CSSCEEEECCSSSCE-----------------EEEEECTTSCEEEEETT
T ss_pred cceEEEEEcCCCcEEEEECCCcEEEEeCCC-CCceeECCCCCCCcc-----------------ceeEECCCCCEEEEeCC
Confidence 568899999999899888766666667741 2221222211 1111 678888988877654 4
Q ss_pred -ceEEEECCCCcEE
Q psy2085 180 -DDQAWTKEIKKTY 192 (358)
Q Consensus 180 -~IKIWD~~tG~~y 192 (358)
.+.+++.+.|+++
T Consensus 225 G~~~~s~~D~G~tW 238 (327)
T 2xbg_A 225 GKIAFSDPDNSENW 238 (327)
T ss_dssp TEEEEEETTEEEEE
T ss_pred ceEEEecCCCCCee
Confidence 7777754446666
No 311
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=69.91 E-value=35 Score=37.83 Aligned_cols=87 Identities=14% Similarity=0.209 Sum_probs=53.8
Q ss_pred ceeEEEEeeCCCCEeEEEEcCCC------CEEEEEEec-CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEE
Q psy2085 35 RIELIQDFEMPGVSTSVRISPDG------QYVLSTGIY-KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSI 107 (358)
Q Consensus 35 rIeliqdfe~~~~v~~v~~SpDG------~~LlatG~~-d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i 107 (358)
.++.+...+++..|.|++++|.+ +++ +.|.+ +++|+|+.+..+.......+..+ ....+|
T Consensus 543 ~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~-aVg~~~d~tv~I~sL~~l~~~~~~~L~~~------------~~p~si 609 (1158)
T 3ei3_A 543 ELRQISHTEMEHEVACLDITPLGDSNGLSPLC-AIGLWTDISARILKLPSFELLHKEMLGGE------------IIPRSI 609 (1158)
T ss_dssp EEEEEEEEECSSCEEEEECCCCSSSTTCCSEE-EEEETTTTEEEEEETTTCCEEEEEECCSS------------CCEEEE
T ss_pred ceeeecccCCCCceEEEEeecCCCCcccccEE-EEEECCCCEEEEEECCCCCeEEEEECCCC------------CCCcEE
Confidence 34556667889999999998743 454 67887 99999999987643322222111 122333
Q ss_pred EEc--CCCCEEEEEeCCCeEE--EEeCCCCc
Q psy2085 108 AIN--PVHQLICVGTIEGKVE--AWDPRMKV 134 (358)
Q Consensus 108 ~~n--p~~~llasGs~DGtV~--iWD~Rs~~ 134 (358)
.+. ....+|..|-.||.+- .+|..++.
T Consensus 610 ~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~ 640 (1158)
T 3ei3_A 610 LMTTFESSHYLLCALGDGALFYFGLNIETGL 640 (1158)
T ss_dssp EEEEETTEEEEEEEETTSEEEEEEECTTTCC
T ss_pred EEEEeCCCcEEEEEeCCCeEEEEEEcCCCCc
Confidence 332 1234677888899874 35655544
No 312
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=69.89 E-value=68 Score=29.47 Aligned_cols=112 Identities=12% Similarity=0.042 Sum_probs=67.1
Q ss_pred CEeEEEEcCCCCEEEEEEe-cCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCe
Q psy2085 47 VSTSVRISPDGQYVLSTGI-YKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIEGK 124 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~-~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~DGt 124 (358)
.-+.|++.|.+.+|..|-. ..+.|..+++.....+ .+++.+. ..-|.|+++|+++ +..+-+..+.
T Consensus 123 ~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~------------~~~~~~l-~~Pnglavd~~~~~lY~aD~~~~~ 189 (318)
T 3sov_A 123 QPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF------------IIINSEI-YWPNGLTLDYEEQKLYWADAKLNF 189 (318)
T ss_dssp SEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE------------EEECSSC-SCEEEEEEETTTTEEEEEETTTTE
T ss_pred CccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE------------EEEECCC-CCccEEEEeccCCEEEEEECCCCE
Confidence 3578999998777766642 2578888887642111 0111111 3468999999655 5666667899
Q ss_pred EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCCCc
Q psy2085 125 VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEIKK 190 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~tG~ 190 (358)
|..+|+........+.... ..|..|++.. ..|+-+| .|...|..+|+
T Consensus 190 I~~~d~dG~~~~~~~~~~~-----------------~~P~glav~~--~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 190 IHKSNLDGTNRQAVVKGSL-----------------PHPFALTLFE--DILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp EEEEETTSCSCEEEECSCC-----------------SCEEEEEEET--TEEEEEETTTTEEEEEETTTCC
T ss_pred EEEEcCCCCceEEEecCCC-----------------CCceEEEEeC--CEEEEEecCCCeEEEEECCCCC
Confidence 9999986433222222111 1225567643 3455334 78888988887
No 313
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=67.57 E-value=91 Score=30.05 Aligned_cols=102 Identities=16% Similarity=0.194 Sum_probs=64.8
Q ss_pred CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccc
Q psy2085 68 PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCIS 147 (358)
Q Consensus 68 ~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~ 147 (358)
.+|-|-|+.+......|-..++ +.-.||..++||.=. ..++.++|+.+++.++....+...+
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi~Ad----------------sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~Vv- 110 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPISAD----------------SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVT- 110 (365)
T ss_dssp EEEEEEETTSTTSCEEEECCCS----------------EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEE-
T ss_pred CEEEEEECCCCCCccccccccc----------------eeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccE-
Confidence 3799999987543333333332 344688888888765 7899999999999998887654432
Q ss_pred cccCCCccccccCCCceeeEEcCCCCEEEEec-ceEEEECCCCc------------------EEecCCCCCccccc
Q psy2085 148 NERDTEEKEGKASSDESSEEEEEEEEEEESSD-DDQAWTKEIKK------------------TYNLGPAPKWCGFL 204 (358)
Q Consensus 148 ~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-~IKIWD~~tG~------------------~y~lgpap~Wcsfl 204 (358)
-=.|-.+...-+-++ .|--|++.... .|...+.-+||.-.
T Consensus 111 -----------------fWkWis~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~ 169 (365)
T 2xzh_A 111 -----------------FWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLT 169 (365)
T ss_dssp -----------------EEEECSSSEEEEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEE
T ss_pred -----------------EEEecCCCeEEEEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEE
Confidence 123444333323344 66667665321 45667888898643
No 314
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=67.02 E-value=1.1e+02 Score=30.71 Aligned_cols=43 Identities=12% Similarity=-0.002 Sum_probs=34.2
Q ss_pred CeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCc
Q psy2085 103 ELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNC 145 (358)
Q Consensus 103 ~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~ 145 (358)
.--++.+|+.++++-.-+.-|.|.++|+.|+.++..-.....+
T Consensus 260 FPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~ 302 (494)
T 1bpo_A 260 FPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGET 302 (494)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred ceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCc
Confidence 3457778888898888899999999999999998665544433
No 315
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=64.18 E-value=53 Score=30.66 Aligned_cols=71 Identities=10% Similarity=-0.048 Sum_probs=37.2
Q ss_pred CEeEEEEcCC---CCEEEEEEec-------CCeEEEEEcCCCceeeeeeccCceEEEEEee--cCCCCCeeEEEEcCCCC
Q psy2085 47 VSTSVRISPD---GQYVLSTGIY-------KPRVRCYETDNLSMKFERCFDSEVVTFEILS--DDYSSELNSIAINPVHQ 114 (358)
Q Consensus 47 ~v~~v~~SpD---G~~LlatG~~-------d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS--~D~s~~In~i~~np~~~ 114 (358)
....|+|+|| +.+|.++-+. ..+|..|++.....+... .++ -+..+. +...+.-+.|+|.|++.
T Consensus 67 g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~---~~~-i~~~~p~~~~~~h~~~~l~~~pdG~ 142 (353)
T 2g8s_A 67 GLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTD---FRT-VFRQMPKLSTGNHFGGRLVFDGKGY 142 (353)
T ss_dssp SEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEE---EEE-EEECSSCCBSSSCCCCCEEECSSSE
T ss_pred CceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCc---eEE-EEEECCCCCCCcccCccEEECCCCc
Confidence 4689999996 5566665433 235666666432111110 000 011111 01113357899999998
Q ss_pred EEEEEeC
Q psy2085 115 LICVGTI 121 (358)
Q Consensus 115 llasGs~ 121 (358)
|.++-++
T Consensus 143 Lyv~~Gd 149 (353)
T 2g8s_A 143 LFIALGE 149 (353)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 7777554
No 316
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=63.47 E-value=58 Score=30.96 Aligned_cols=75 Identities=13% Similarity=0.117 Sum_probs=51.6
Q ss_pred CEeEEEEcCCCCEEEEEEecC-CeEEEEEcCCCceeeeeeccCceEEEEEeecC---CCCCeeEEEEcCCCCEEEEEeCC
Q psy2085 47 VSTSVRISPDGQYVLSTGIYK-PRVRCYETDNLSMKFERCFDSEVVTFEILSDD---YSSELNSIAINPVHQLICVGTIE 122 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d-~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D---~s~~In~i~~np~~~llasGs~D 122 (358)
.++.+.+.++|. +.+|++.. +.|-..+.....+. .+ .++.. ...+.|.|+++|++.+|+.....
T Consensus 138 ~~nDvavD~~Gn-aYVt~s~~~~~I~rV~pdG~~~~----------~~-~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~ 205 (334)
T 2p9w_A 138 GVVQSAQDRDGN-SYVAFALGMPAIARVSADGKTVS----------TF-AWESGNGGQRPGYSGITFDPHSNKLIAFGGP 205 (334)
T ss_dssp EEEEEEECTTSC-EEEEEEESSCEEEEECTTSCCEE----------EE-EECCCCSSSCCSCSEEEEETTTTEEEEESSS
T ss_pred CCceeEECCCCC-EEEeCCCCCCeEEEEeCCCCEEe----------ee-eecCCCcccccCcceEEEeCCCCEEEEEcCC
Confidence 488999999998 44678888 87766665532211 11 11111 11468899999999877777669
Q ss_pred CeEEEEeCCCC
Q psy2085 123 GKVEAWDPRMK 133 (358)
Q Consensus 123 GtV~iWD~Rs~ 133 (358)
|.+..+|+++.
T Consensus 206 g~L~~fD~~~p 216 (334)
T 2p9w_A 206 RALTAFDVSKP 216 (334)
T ss_dssp SSEEEEECSSS
T ss_pred CeEEEEcCCCC
Confidence 99999998843
No 317
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=62.89 E-value=1.1e+02 Score=29.43 Aligned_cols=43 Identities=12% Similarity=-0.002 Sum_probs=33.7
Q ss_pred CeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCc
Q psy2085 103 ELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNC 145 (358)
Q Consensus 103 ~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~ 145 (358)
.--++.+|+.++++-.-+--|.|.++|+.|+.++..-.....+
T Consensus 261 FPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~ 303 (365)
T 2xzh_A 261 FPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGET 303 (365)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred ceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCc
Confidence 3456677888888888899999999999999998766544444
No 318
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=61.50 E-value=1.1e+02 Score=28.92 Aligned_cols=86 Identities=10% Similarity=0.062 Sum_probs=46.4
Q ss_pred ceeEEEE-eeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-
Q psy2085 35 RIELIQD-FEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV- 112 (358)
Q Consensus 35 rIeliqd-fe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~- 112 (358)
.++++.+ +++| ..++|.|||..+ ++-...++|++++............. .+ . .....+.+.|+++|+
T Consensus 23 ~~~~va~gL~~P---~~ia~~pdG~ll-Vter~~G~I~~v~~~~g~~~~v~~~~-~v-----~-~~g~~GllGia~~Pdf 91 (347)
T 3das_A 23 VLRTVATGLNSP---WGLAPLPGGDLL-VSSRDEATITRVDAKTGRKTELGEVP-GV-----S-PSGEGGLLGIALSPDY 91 (347)
T ss_dssp EEEEEECCCSSE---EEEEECTTSCEE-EEETTTCEEEEECTTTCCEEEEEECT-TC-----C-CBTTBSEEEEEECTTH
T ss_pred eeEEeecCCCCc---eEEEEcCCCcEE-EEEecCCEEEEEECCCCcEeeecccC-ce-----e-ecCCCCceeeEecccc
Confidence 4555543 4444 799999999855 44333788998876543221100000 00 0 011157899999995
Q ss_pred ---CCEEEEE--eCCCeEEEEeCC
Q psy2085 113 ---HQLICVG--TIEGKVEAWDPR 131 (358)
Q Consensus 113 ---~~llasG--s~DGtV~iWD~R 131 (358)
+.+.++= ..++.|--|.+.
T Consensus 92 ~~~g~lYv~yt~~~~~~v~R~~~~ 115 (347)
T 3das_A 92 ASDHMVYAYFTSASDNRIVRMLYD 115 (347)
T ss_dssp HHHCEEEEEEECSSSEEEEEEEBC
T ss_pred ccCCEEEEEEecCCCCEEEEEEeC
Confidence 4444432 234455555544
No 319
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=58.43 E-value=1.5e+02 Score=29.67 Aligned_cols=62 Identities=16% Similarity=0.251 Sum_probs=43.8
Q ss_pred CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCc
Q psy2085 67 KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNC 145 (358)
Q Consensus 67 d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~ 145 (358)
..+|-|-|+.+......|...+ .+.-.||..++||.=. ..++.++|+.+++.++....+.+.
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~A----------------dsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~V 108 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPISA----------------DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDV 108 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECCC----------------SEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCC
T ss_pred CCeEEEEECCCCCcceeccccc----------------ceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCc
Confidence 3489999998754322333332 2445688888887765 789999999999999888765543
No 320
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=57.41 E-value=1.7e+02 Score=29.77 Aligned_cols=102 Identities=8% Similarity=0.019 Sum_probs=65.6
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEeCCCeE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV-HQLICVGTIEGKV 125 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~-~~llasGs~DGtV 125 (358)
....|+|.+++..|..+-...++|..+++...... .++..+- .....|++.+. +.+..+-...+.|
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~------------~v~~~g~-~~P~GlAvD~~~~~LY~tD~~~~~I 104 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSALE------------HVVEFGL-DYPEGMAVDWLGKNLYWADTGTNRI 104 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE------------EEECSSC-SCCCEEEEETTTTEEEEEETTTTEE
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcE------------EEEeCCC-CCcceEEEEeCCCEEEEEECCCCEE
Confidence 46789999988888888777789999998753211 0111111 34678999876 4577777778999
Q ss_pred EEEeCCCCceeEEEe-CCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec
Q psy2085 126 EAWDPRMKVKAGTLD-CAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD 179 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~-~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD 179 (358)
.+-|+..... .+|- ... ..|..|+++|....|+-+|
T Consensus 105 ~v~~~dG~~~-~~l~~~~l-----------------~~P~~iavdp~~G~lY~tD 141 (628)
T 4a0p_A 105 EVSKLDGQHR-QVLVWKDL-----------------DSPRALALDPAEGFMYWTE 141 (628)
T ss_dssp EEEETTSTTC-EEEECSSC-----------------CCEEEEEEETTTTEEEEEE
T ss_pred EEEecCCCcE-EEEEeCCC-----------------CCcccEEEccCCCeEEEeC
Confidence 9999865433 3332 111 1227788888666666443
No 321
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=57.41 E-value=96 Score=30.49 Aligned_cols=37 Identities=16% Similarity=0.195 Sum_probs=25.2
Q ss_pred eeEEE-EeeCCCCEeEEEEcCCCC-EEEEEEecCCeEEEEEcC
Q psy2085 36 IELIQ-DFEMPGVSTSVRISPDGQ-YVLSTGIYKPRVRCYETD 76 (358)
Q Consensus 36 Ieliq-dfe~~~~v~~v~~SpDG~-~LlatG~~d~~IrvwDl~ 76 (358)
|+.+. .+++| ..++|.|||. .|+++ .-.++|++++..
T Consensus 6 v~~va~gL~~P---~~~a~~pdG~~rl~V~-er~G~i~~~~~~ 44 (463)
T 2wg3_C 6 IQEVVSGLRQP---VGALHSGDGSQRLFIL-EKEGYVKILTPE 44 (463)
T ss_dssp EEEEEEEESSE---EEEECCSSSSCCEEEE-ETTTEEEEECTT
T ss_pred EEEeccCCCCc---eEEEECCCCCeEEEEE-eCCceEEEEeCC
Confidence 44444 36655 7899999996 34444 457899999754
No 322
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=43.29 E-value=1.4e+02 Score=27.04 Aligned_cols=89 Identities=15% Similarity=0.169 Sum_probs=48.2
Q ss_pred cccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC
Q psy2085 32 IRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP 111 (358)
Q Consensus 32 ~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np 111 (358)
+-.|+..|-.=++. ....++|+|||. |.+. ..+. +|.....+-....-... ...+-+-.| ..-.++.|.|
T Consensus 28 ~~~~a~~iG~~gw~-~~~~laf~P~G~-LYaV--~~G~--Ly~~~~~t~~~~~W~~s---~t~IG~~Gw-~~F~a~~fD~ 97 (236)
T 1tl2_A 28 WLARATLIGKGGWS-NFKFLFLSPGGE-LYGV--LNDK--IYKGTPPTHDNDNWMGR---AKKIGNGGW-NQFQFLFFDP 97 (236)
T ss_dssp HHHHSEEEESSSCT-TCSEEEECTTSC-EEEE--ETTE--EEEESCCCSTTCCHHHH---CEEEECSCG-GGCSEEEECT
T ss_pred hhhhccccCccccc-cceeEEECCCcc-EEEE--eCCe--EEEECCCCCCccccccc---ccEeccccc-ccceEEEECC
Confidence 44455555541111 456999999998 4454 4565 45443211000000000 011111122 2247899999
Q ss_pred CCCEEEEEeCCCeEEEEeCCC
Q psy2085 112 VHQLICVGTIEGKVEAWDPRM 132 (358)
Q Consensus 112 ~~~llasGs~DGtV~iWD~Rs 132 (358)
++.|.++ .||.|.-||+-+
T Consensus 98 ~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 98 NGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TSCEEEE--ETTEEEEESCCC
T ss_pred CCCEEEe--CCCEEEEeCCCc
Confidence 9999988 569999888744
No 323
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=42.96 E-value=36 Score=35.89 Aligned_cols=31 Identities=16% Similarity=0.159 Sum_probs=27.5
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeEEEeCC
Q psy2085 112 VHQLICVGTIEGKVEAWDPRMKVKAGTLDCA 142 (358)
Q Consensus 112 ~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~ 142 (358)
+...+.+-+.|.++|+||+++++++.+.+..
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~ 260 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYDMV 260 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEETT
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeeccc
Confidence 3668888899999999999999999998873
No 324
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=41.70 E-value=1.1e+02 Score=32.95 Aligned_cols=35 Identities=6% Similarity=0.043 Sum_probs=28.1
Q ss_pred CCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 45 PGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
+..+.++..++|..+|++. +-|.++|||++.+..+
T Consensus 235 ~~~~~~~~~~~~~~~lftl-~~D~~LRiWsl~t~~~ 269 (950)
T 4gq2_M 235 PNTIISMIFLSTYNVLVML-SLDYKLKVLDLSTNQC 269 (950)
T ss_dssp TTCEEEEEEETTTTEEEEE-ETTCEEEEEETTTTEE
T ss_pred cceEEEEeecCCCcEEEEE-ECCCEEEEEECCCCCe
Confidence 3467888899999998765 5789999999987643
No 325
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=38.49 E-value=1.8e+02 Score=27.89 Aligned_cols=87 Identities=13% Similarity=0.221 Sum_probs=54.4
Q ss_pred CEeEEEEcCCCC-EEEEEEe-------------cCCeEEEEEcCCC--ceeeeeeccCceEEEEEeecCCCCCeeEEEEc
Q psy2085 47 VSTSVRISPDGQ-YVLSTGI-------------YKPRVRCYETDNL--SMKFERCFDSEVVTFEILSDDYSSELNSIAIN 110 (358)
Q Consensus 47 ~v~~v~~SpDG~-~LlatG~-------------~d~~IrvwDl~~l--slk~~r~~d~e~v~f~~LS~D~s~~In~i~~n 110 (358)
.|.++.+.++|+ |++=+|. -.|+|-+||+.+. .+.....+..+++ .++ +.++.+.+.
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~-----~~~--S~l~di~VD 160 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLV-----EKP--TYFGGFAVD 160 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGC-----CCG--GGEEEEEEE
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhc-----ccC--CccceEEEe
Confidence 688899988886 4444551 2568999999876 4322222222211 111 467888887
Q ss_pred ---CC----CC-EEEEEeCCCeEEEEeCCCCceeEEEe
Q psy2085 111 ---PV----HQ-LICVGTIEGKVEAWDPRMKVKAGTLD 140 (358)
Q Consensus 111 ---p~----~~-llasGs~DGtV~iWD~Rs~~~i~~L~ 140 (358)
|. +. ..++-+..+-|-+.|+.+++.-..++
T Consensus 161 ~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~ 198 (381)
T 3q6k_A 161 VANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTH 198 (381)
T ss_dssp ESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred cccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEcc
Confidence 32 22 34454557889999999998877774
No 326
>3lcn_C MRNA transport factor GFD1; nuclear mRNA export, metal-binding, nucleus, RNA-binding, ZI finger, membrane, nuclear pore complex; 2.00A {Saccharomyces cerevisiae}
Probab=35.65 E-value=26 Score=21.05 Aligned_cols=14 Identities=36% Similarity=0.665 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHhh
Q psy2085 275 KKKKIRERIEQERT 288 (358)
Q Consensus 275 r~~~i~~~~~~~~~ 288 (358)
+.+.+++|||++|+
T Consensus 7 Km~lLKKKIEEQr~ 20 (29)
T 3lcn_C 7 KMKLLKKKIEEQRE 20 (29)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45678888888884
No 327
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=35.56 E-value=1.4e+02 Score=30.70 Aligned_cols=60 Identities=7% Similarity=0.055 Sum_probs=41.4
Q ss_pred CCeeEEEEcCCCCEEE-EEeC-----------CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEc
Q psy2085 102 SELNSIAINPVHQLIC-VGTI-----------EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEE 169 (358)
Q Consensus 102 ~~In~i~~np~~~lla-sGs~-----------DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs 169 (358)
..-+.|.|.+++.|.+ |-+. ...|-+.|+.+++....+.++... .|+.|.|+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~a----------------EpnGiafS 539 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGC----------------EVTGISFS 539 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTC----------------EEEEEEEC
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCc----------------cccCCEEC
Confidence 4578899999998877 4221 126777888888766666544221 11789999
Q ss_pred CCCCEEEE
Q psy2085 170 EEEEEEES 177 (358)
Q Consensus 170 ~d~~~llS 177 (358)
||++.|+.
T Consensus 540 PD~ktLfV 547 (592)
T 4a9v_A 540 PDQKTLFV 547 (592)
T ss_dssp TTSSEEEE
T ss_pred CCCCEEEE
Confidence 99998874
No 328
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=35.50 E-value=3.6e+02 Score=27.18 Aligned_cols=111 Identities=13% Similarity=-0.029 Sum_probs=69.3
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEE-eCCCe
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVG-TIEGK 124 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasG-s~DGt 124 (358)
....+++.+.+..|..+-...++|.+.++.....+.. +..+. ..-+.|++.|.++ ++.|- +..+.
T Consensus 85 ~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l------------~~~~l-~~P~~Iavdp~~g~ly~tD~g~~~~ 151 (619)
T 3s94_A 85 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVL------------FWQEL-DQPRAIALDPSSGFMYWTDWGEVPK 151 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE------------ECSSC-SCCCCEEEETTTTEEEEEECSSSCE
T ss_pred CcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEE------------EeCCC-CCCceEEEecCCCeEEEeccCCCCE
Confidence 5688999998887877777778999999875322110 11111 3467899999755 55554 23567
Q ss_pred EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECC
Q psy2085 125 VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKE 187 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~ 187 (358)
|+.-++.-.. ..++-... + ..|+.|++++++..|+-+| .|...|.+
T Consensus 152 I~r~~~dG~~-~~~l~~~~--~--------------~~P~Glald~~~~~LY~aD~~~~~I~~~~~d 201 (619)
T 3s94_A 152 IERAGMDGSS-RFIIINSE--I--------------YWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 201 (619)
T ss_dssp EEEEETTSCS-CEEEECSS--C--------------SSEEEEEEETTTTEEEEEETTTCCEEEESSS
T ss_pred EEEEECCCCc-eEEEEeCC--C--------------CCCcEEEEEccCCEEEEEeCCCCeEEEecCC
Confidence 7777764322 22222110 0 1227899999888888766 66666765
No 329
>4f3f_C Mesothelin; antibody FAB, immune syste; HET: PCA; 2.65A {Homo sapiens}
Probab=35.32 E-value=18 Score=26.44 Aligned_cols=49 Identities=20% Similarity=0.507 Sum_probs=34.2
Q ss_pred ceeecceeeeHHHHhhcCCCccccccceeecccccccchHHHHHhhhccCChhhHHHHHHHHHHHHHH
Q psy2085 218 NVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQ 285 (358)
Q Consensus 218 ~vyddy~fvt~~~l~~l~l~~ligt~~l~~ymhg~fi~~~ly~~~~~~~~p~~~~~~r~~~i~~~~~~ 285 (358)
.+-++..|-+.+||+ .=+++.+|+++|. +..+-||.||..+ -+|.|+++
T Consensus 10 ~vde~LVfY~~~ELe-----ACvd~~lL~a~lD------------~v~~~Pft~Eql~--V~K~KLde 58 (69)
T 4f3f_C 10 EIDESLIFYKKWELE-----ACVDAALLATQMD------------RVNAIPFTYEQLD--VLKHKLDE 58 (69)
T ss_dssp SCCGGGGGSCHHHHH-----HHCCHHHHHHTGG------------GGGGSCCCHHHHH--HHHHHHHH
T ss_pred eccccceeccHHHHH-----HHhchHHHHHccc------------HHhcCCChHHHHH--HHHHHHHH
Confidence 344566777777774 3467789999887 3356799999877 45566654
No 330
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=34.83 E-value=2.6e+02 Score=25.24 Aligned_cols=120 Identities=18% Similarity=0.178 Sum_probs=62.6
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG 123 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG 123 (358)
.+..+..+.++|+|.++ +.|......+-.|-.. ..+.... ......+..+.+.|++.+++. +.+|
T Consensus 161 ~~~~~~~~~~~~~~~~~-~~g~~G~~~~S~d~gG--~tW~~~~-----------~~~~~~~~~~~~~~~g~~~~~-~~~G 225 (327)
T 2xbg_A 161 AIGVMRNLNRSPSGEYV-AVSSRGSFYSTWEPGQ--TAWEPHN-----------RTTSRRLHNMGFTPDGRLWMI-VNGG 225 (327)
T ss_dssp CCCCEEEEEECTTSCEE-EEETTSSEEEEECTTC--SSCEEEE-----------CCSSSCEEEEEECTTSCEEEE-ETTT
T ss_pred CCcceEEEEEcCCCcEE-EEECCCcEEEEeCCCC--CceeECC-----------CCCCCccceeEECCCCCEEEE-eCCc
Confidence 34567888899988866 4443322222222211 1111110 000146788889998887765 5678
Q ss_pred eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe-c-ceEEEECCCCcEE
Q psy2085 124 KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS-D-DDQAWTKEIKKTY 192 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa-D-~IKIWD~~tG~~y 192 (358)
.|.+++...+..-..+..+. +.....+ ..|.|.+++..++.. + .| ++..+.|+++
T Consensus 226 ~~~~s~~D~G~tW~~~~~~~--~~~~~~~-----------~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW 282 (327)
T 2xbg_A 226 KIAFSDPDNSENWGELLSPL--RRNSVGF-----------LDLAYRTPNEVWLAGGAGAL-LCSQDGGQTW 282 (327)
T ss_dssp EEEEEETTEEEEECCCBCTT--SSCCSCE-----------EEEEESSSSCEEEEESTTCE-EEESSTTSSC
T ss_pred eEEEecCCCCCeeEeccCCc--ccCCcce-----------EEEEecCCCEEEEEeCCCeE-EEeCCCCccc
Confidence 88877422233222222110 0000011 678899888777764 4 56 5666667755
No 331
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=32.85 E-value=1.3e+02 Score=27.18 Aligned_cols=66 Identities=14% Similarity=0.019 Sum_probs=43.4
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce------eEEEeC-CCCccccccCCCccccccCCCceeeEEcCCCCE
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK------AGTLDC-AFNCISNERDTEEKEGKASSDESSEEEEEEEEE 174 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~------i~~L~~-~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ 174 (358)
..+..++|+|++.|.|. .+|.+.--|+.+... -..|-. ..+. | ..+.|.|+|.+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~----F-------------~a~~fD~~G~L 101 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ----F-------------QFLFFDPNGYL 101 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG----C-------------SEEEECTTSCE
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc----c-------------eEEEECCCCCE
Confidence 46789999998888887 678777777755221 122211 1111 1 56899999988
Q ss_pred EEEec-ceEEEEC
Q psy2085 175 EESSD-DDQAWTK 186 (358)
Q Consensus 175 llSaD-~IKIWD~ 186 (358)
-++.| .|.=|+.
T Consensus 102 Yav~dG~iyr~~p 114 (236)
T 1tl2_A 102 YAVSKDKLYKASP 114 (236)
T ss_dssp EEEETTEEEEESC
T ss_pred EEeCCCEEEEeCC
Confidence 77888 6655565
No 332
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=30.72 E-value=3.8e+02 Score=27.10 Aligned_cols=112 Identities=12% Similarity=-0.063 Sum_probs=0.0
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEA 127 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~i 127 (358)
|.++...++|..-+++|+..| |.+||..+...+.-........ ..|+++....++.+. .|+..| +..
T Consensus 474 i~~i~~d~~g~lWi~~~t~~G-l~~~d~~~~~~~~~~~~~~~~~----------~~~~~i~~d~~g~lW-igt~~G-l~~ 540 (758)
T 3ott_A 474 INQIIPDNEGNVWVLLYNNKG-IDKINPRTREVTKLFADELTGE----------KSPNYLLCDEDGLLW-VGFHGG-VMR 540 (758)
T ss_dssp EEEEEECTTSCEEEEETTCSS-EEEEETTTTEEEEECTTTSCGG----------GCEEEEEECTTSCEE-EEETTE-EEE
T ss_pred eeeEEEcCCCCEEEEccCCCC-cEEEeCCCCceEEecCCCcCCC----------cccceEEECCCCCEE-EEecCc-eEE
Q ss_pred EeCCCCceeEE--EeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-ceEEEECCCCc
Q psy2085 128 WDPRMKVKAGT--LDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-DDQAWTKEIKK 190 (358)
Q Consensus 128 WD~Rs~~~i~~--L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-~IKIWD~~tG~ 190 (358)
+|+.++..... -..+...+ .+|... +|..-+++. -+-.+|..+++
T Consensus 541 ~~~~~~~~~~~~~~gl~~~~i-----------------~~i~~~-~g~lWi~t~~Gl~~~~~~~~~ 588 (758)
T 3ott_A 541 INPKDESQQSISFGSFSNNEI-----------------LSMTCV-KNSIWVSTTNGLWIIDRKTMD 588 (758)
T ss_dssp ECC--CCCCBCCCCC---CCE-----------------EEEEEE-TTEEEEEESSCEEEEETTTCC
T ss_pred EecCCCceEEecccCCCccce-----------------EEEEEC-CCCEEEECCCCeEEEcCCCce
No 333
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=28.24 E-value=3.8e+02 Score=25.14 Aligned_cols=34 Identities=18% Similarity=0.124 Sum_probs=27.6
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK 135 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~ 135 (358)
..-..|+|.|++.++++--..|.|.+++...+..
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~ 65 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRK 65 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcE
Confidence 4567899999999988866689999999876653
No 334
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=25.24 E-value=1.3e+02 Score=32.92 Aligned_cols=27 Identities=7% Similarity=-0.254 Sum_probs=22.6
Q ss_pred eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 164 SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 164 ~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.++..+++..+|++ -| ++||||+.+|+
T Consensus 241 vs~~~~~~~~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 241 ISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp SCCEEETTTTEEEEEBTTCEEEEEETTTTE
T ss_pred EEeeccCCccEEEEEeCCCEEEEEECCCCC
Confidence 56677788888875 68 99999999997
No 335
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=23.79 E-value=1.3e+02 Score=26.52 Aligned_cols=24 Identities=29% Similarity=0.360 Sum_probs=18.6
Q ss_pred CCCEEEEEeCCC-----eEEEEeCCCCce
Q psy2085 112 VHQLICVGTIEG-----KVEAWDPRMKVK 135 (358)
Q Consensus 112 ~~~llasGs~DG-----tV~iWD~Rs~~~ 135 (358)
++.+++.||.++ .|.++|+.+.+-
T Consensus 251 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 251 NGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 567889988764 489999988753
No 336
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=23.41 E-value=1.7e+02 Score=25.59 Aligned_cols=24 Identities=17% Similarity=0.371 Sum_probs=18.6
Q ss_pred CCCEEEEEeCC-----CeEEEEeCCCCce
Q psy2085 112 VHQLICVGTIE-----GKVEAWDPRMKVK 135 (358)
Q Consensus 112 ~~~llasGs~D-----GtV~iWD~Rs~~~ 135 (358)
++.+++.||.+ ..|.++|+.+++-
T Consensus 253 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 253 RGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp TTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred CCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 56788888876 4688999988763
No 337
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=22.39 E-value=2.2e+02 Score=32.75 Aligned_cols=101 Identities=16% Similarity=0.197 Sum_probs=62.7
Q ss_pred CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCcc
Q psy2085 67 KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCI 146 (358)
Q Consensus 67 d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v 146 (358)
..+|-|-|+.+......|...+ .+.-.||..++||.=+ ..++.++|+.+++.++....+...+
T Consensus 47 ~~~vvIidl~~~~~~~rrpi~A----------------dsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~Vv 109 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPISA----------------DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVT 109 (1630)
T ss_pred CceEEEEECCCCCCcccccccc----------------hhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCce
Confidence 3488999988643222222222 2334678888887765 7899999999999887776544332
Q ss_pred ccccCCCccccccCCCceeeEEcCCCCEEEEec-ceEEEECCCCc------------------EEecCCCCCccc
Q psy2085 147 SNERDTEEKEGKASSDESSEEEEEEEEEEESSD-DDQAWTKEIKK------------------TYNLGPAPKWCG 202 (358)
Q Consensus 147 ~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-~IKIWD~~tG~------------------~y~lgpap~Wcs 202 (358)
-=.|-.....-+-++ .|--|++.... .|...+.-+||.
T Consensus 110 ------------------fWkWis~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~ 166 (1630)
T 1xi4_A 110 ------------------FWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLL 166 (1630)
T ss_pred ------------------EEEecCCCeeEEEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEE
Confidence 123444443333456 88888885322 356667777876
No 338
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=20.08 E-value=5.4e+02 Score=24.01 Aligned_cols=83 Identities=5% Similarity=-0.005 Sum_probs=0.0
Q ss_pred EEEEEecCCeEEEEEcCCCceeeeeecc--CceE-----------EEEEeecCCCCCeeEEE------------------
Q psy2085 60 VLSTGIYKPRVRCYETDNLSMKFERCFD--SEVV-----------TFEILSDDYSSELNSIA------------------ 108 (358)
Q Consensus 60 LlatG~~d~~IrvwDl~~lslk~~r~~d--~e~v-----------~f~~LS~D~s~~In~i~------------------ 108 (358)
++..|+.|+.|.-+|..+...++..... +..+ ...+..|...+.+.++.
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~ 91 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVST 91 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceec
Q ss_pred --EcC-------------CCCEEEEEeCCCeEEEEeCCCCceeEEEeCC
Q psy2085 109 --INP-------------VHQLICVGTIEGKVEAWDPRMKVKAGTLDCA 142 (358)
Q Consensus 109 --~np-------------~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~ 142 (358)
+.- .++.+.+|+.+|.+-.-|+++|+.+-.+...
T Consensus 92 SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 92 SPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp CSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred cccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Done!