BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2089
(216 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8K215|LYRM4_MOUSE LYR motif-containing protein 4 OS=Mus musculus GN=Lyrm4 PE=2 SV=1
Length = 91
Score = 90.9 bits (224), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 59/82 (71%)
Query: 37 SKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELE 96
S+ +L LY+A++RES F AYNYRMY +RR R+ F+ NKNV + +I L N+ ++LE
Sbjct: 5 SRAQVLDLYRAMMRESKHFSAYNYRMYAVRRIRDAFRENKNVKDPVEIQALVNKAKRDLE 64
Query: 97 VLKRQVLISQLFKPDKLVIETQ 118
+++RQV I QL+ DKL+IE Q
Sbjct: 65 IIRRQVHIGQLYSTDKLIIENQ 86
>sp|Q0VCG0|LYRM4_BOVIN LYR motif-containing protein 4 OS=Bos taurus GN=LYRM4 PE=3 SV=1
Length = 91
Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 58/82 (70%)
Query: 37 SKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELE 96
S+ +L LY+A+LRES +F AYNYR Y +RR R+ F+ NKNV + +I L N+ ++L
Sbjct: 5 SRAQVLDLYRAMLRESKRFGAYNYRTYAIRRIRDAFRENKNVKDPVEIQALVNKAKRDLG 64
Query: 97 VLKRQVLISQLFKPDKLVIETQ 118
+++RQV I Q++ DKLVIE Q
Sbjct: 65 IIRRQVHIGQMYSTDKLVIENQ 86
>sp|Q9HD34|LYRM4_HUMAN LYR motif-containing protein 4 OS=Homo sapiens GN=LYRM4 PE=1 SV=1
Length = 91
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 58/82 (70%)
Query: 37 SKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELE 96
S+ +L LY+A+LRES +F AYNYR Y +RR R+ F+ NKNV + +I L N+ ++L
Sbjct: 5 SRAQVLSLYRAMLRESKRFSAYNYRTYAVRRIRDAFRENKNVKDPVEIQTLVNKAKRDLG 64
Query: 97 VLKRQVLISQLFKPDKLVIETQ 118
V++RQV I QL+ DKL+IE +
Sbjct: 65 VIRRQVHIGQLYSTDKLIIENR 86
>sp|B5FZA8|LYRM4_TAEGU LYR motif-containing protein 4 OS=Taeniopygia guttata GN=LYRM4 PE=3
SV=1
Length = 89
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 57/80 (71%)
Query: 37 SKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELE 96
S+ +L+LY+ALLRES +F +YNYR Y +RR R+ F+ NKN+ ++E+I L N+ LE
Sbjct: 5 SRAQVLRLYRALLRESQRFSSYNYRTYAIRRIRDAFRENKNIADSEKIEELLNKAKANLE 64
Query: 97 VLKRQVLISQLFKPDKLVIE 116
V++RQ I ++ +KL+IE
Sbjct: 65 VIQRQGTIDHMYATEKLIIE 84
>sp|B8JLQ0|LYRM4_DANRE LYR motif-containing protein 4 OS=Danio rerio GN=lyrm4 PE=3 SV=1
Length = 89
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%)
Query: 35 SVSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKE 94
S S+ ++ LY+ L++ES KFP+YNYR Y LRR ++ F+ N +VDN + LL N+ +
Sbjct: 3 SCSRAQVISLYRMLMKESKKFPSYNYRTYALRRVKDGFRENLHVDNPRTLDLLINQAREN 62
Query: 95 LEVLKRQVLISQLFKPDKLVIETQ 118
L V+KRQV I L+ + V+E +
Sbjct: 63 LAVIKRQVSIGHLYSAQRTVVEKE 86
>sp|Q6DCS1|LYRM4_XENLA LYR motif-containing protein 4 OS=Xenopus laevis GN=lyrm4 PE=3 SV=1
Length = 89
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 54/81 (66%)
Query: 37 SKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELE 96
S+ +L LYK +LRES +F +YNYR Y +RR R+ F+ KNVD+ +I L + + L
Sbjct: 5 SRSQVLSLYKIMLRESQRFSSYNYRTYAIRRIRDAFREKKNVDDFLEIETLLHRAKENLN 64
Query: 97 VLKRQVLISQLFKPDKLVIET 117
V++RQV I Q++ KLVIE+
Sbjct: 65 VIQRQVTIGQMYATHKLVIES 85
>sp|B5X5U9|LYM4A_SALSA LYR motif-containing protein 4A OS=Salmo salar GN=lyrm4a PE=3 SV=1
Length = 92
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 56/82 (68%)
Query: 35 SVSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKE 94
+ S+ ++ LY+ L++ES KFP+YNYR Y LRR ++ F+ N +VDN + + +L N+ +
Sbjct: 3 ACSRTQVISLYRMLIKESKKFPSYNYRTYALRRVKDSFRENLHVDNPKTLDMLLNQAREN 62
Query: 95 LEVLKRQVLISQLFKPDKLVIE 116
L V++RQV I Q++ + ++E
Sbjct: 63 LAVIRRQVSIGQMYTAQRTIVE 84
>sp|P82116|BCN92_DROSU Protein bcn92 OS=Drosophila subobscura GN=bcn92 PE=3 SV=1
Length = 92
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 34 MSVSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLK 93
MS + I LY+ LLRES K PAYN+RMY +R+ R+ F++NK + + +I G +
Sbjct: 1 MSTRRQAIT-LYRNLLRESEKLPAYNFRMYAVRKIRDAFRANKAIRDFAEIDRQMEAGKQ 59
Query: 94 ELEVLKRQVLISQLFKPDKLVIETQ 118
LE+++RQV+I L+ DKLVIE +
Sbjct: 60 NLELIRRQVIIGHLYTADKLVIENK 84
>sp|B5XD90|LYM4B_SALSA LYR motif-containing protein 4B OS=Salmo salar GN=lyrm4b PE=3 SV=1
Length = 84
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 58/83 (69%)
Query: 34 MSVSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLK 93
M+ +L LY+ L++ES+KFP+YNYR Y LRR ++ F++N++V++ + + L N+G
Sbjct: 1 MAACTAQVLSLYRKLMKESNKFPSYNYRTYALRRVQDAFRANRSVEDPKMVEQLLNQGRD 60
Query: 94 ELEVLKRQVLISQLFKPDKLVIE 116
L++++RQV I +++ K ++E
Sbjct: 61 NLDMIRRQVAIGKMYPTQKTIVE 83
>sp|O46098|BCN92_DROME Protein bcn92 OS=Drosophila melanogaster GN=bcn92 PE=3 SV=1
Length = 92
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 34 MSVSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLK 93
MS + I LY+ LLRES K P+YN+RMY R+ R+ F++N++ + +I EG +
Sbjct: 1 MSTRRQAIT-LYRNLLRESEKLPSYNFRMYAARKIRDTFRANRSTRDFAEIDRQMAEGQQ 59
Query: 94 ELEVLKRQVLISQLFKPDKLVIETQ 118
LE+++RQV+I L+ DKLVIE +
Sbjct: 60 NLELIRRQVIIGHLYSADKLVIENK 84
>sp|Q54FN9|LYRM4_DICDI LYR motif-containing protein 4 OS=Dictyostelium discoideum GN=lyrm4
PE=3 SV=1
Length = 81
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 38 KDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELEV 97
K ++L LY++L+RES KF +YN+R Y LRR F+ NKN D NE L+ + LK LE+
Sbjct: 4 KSVVLHLYRSLVRESKKFSSYNFREYSLRRVSVGFRENKNKDQNETKELI-QDALKNLEM 62
Query: 98 LKRQVLISQLFKPDKLVIE 116
+KRQ I+ ++ +KLV+E
Sbjct: 63 VKRQAFINSMYSTNKLVVE 81
>sp|Q6Q560|ISD11_YEAST Protein ISD11 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ISD11 PE=1 SV=1
Length = 94
Score = 63.9 bits (154), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 37 SKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELE 96
++ +L LYK ++ +++F YN+R YFL +TR F+ N N + + + L+ E +L
Sbjct: 8 TRRQVLSLYKEFIKNANQFNNYNFREYFLSKTRTTFRKNMNQQDPKVLMNLFKEAKNDLG 67
Query: 97 VLKRQVLISQLFKPDKLVIE 116
VLKRQ +ISQ++ D+LV+E
Sbjct: 68 VLKRQSVISQMYTFDRLVVE 87
>sp|O60068|ISD11_SCHPO Protein isd11 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=isd11 PE=3 SV=1
Length = 102
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 9/87 (10%)
Query: 34 MSVSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLK 93
MSVSK +++LY+ +L+ S FP Y YR Y +RRTR+KF+ K E + +G+K
Sbjct: 1 MSVSKQHVVRLYRNILKTSKLFP-YTYREYTIRRTRDKFKELK----VESDPAKFEQGIK 55
Query: 94 E----LEVLKRQVLISQLFKPDKLVIE 116
+ LE+++RQ +I+ ++ LV+E
Sbjct: 56 DSEKLLEIIQRQSIINGMYNKRNLVVE 82
>sp|B2GV91|LYRM2_RAT LYR motif-containing protein 2 OS=Rattus norvegicus GN=Lyrm2 PE=3
SV=1
Length = 88
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 36 VSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEG---L 92
+ + +L LY+ +LR + P+ + R Y RE+F+ NK+ + I ++ +G L
Sbjct: 17 MRRQQVLLLYRKILRAIKQIPSDSDRKYLQDWAREEFKRNKSATEEDTIRMMITQGNMQL 76
Query: 93 KELE 96
KELE
Sbjct: 77 KELE 80
>sp|Q5PQ90|LYRM2_XENLA LYR motif-containing protein 2 OS=Xenopus laevis GN=lyrm2 PE=3 SV=1
Length = 87
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 15 MGDKLPNVECLALSTPVTHMSVSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQS 74
MG +LP L L + + +L LY+ ++R + P R Y R++F+
Sbjct: 1 MGSRLPPA-ALTLKQFLV-----RQQVLGLYRRIVRAVRQIPGAADRQYLQDWARDEFRR 54
Query: 75 NKNVDNNEQISLLYNEGLKELEVLKR 100
NK I ++ + G ++L+ L+R
Sbjct: 55 NKGASEEIAIRMMISHGQRQLQELER 80
>sp|Q8R033|LYRM2_MOUSE LYR motif-containing protein 2 OS=Mus musculus GN=Lyrm2 PE=2 SV=1
Length = 88
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 36 VSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEG---L 92
+ + +L LY+ +LR + P+ + R Y RE+F+ NK+ + I ++ +G L
Sbjct: 17 MRRQQVLLLYRKILRAIRQVPSDSDRKYLQDWAREEFKRNKSATEEDTIRMMITQGNMQL 76
Query: 93 KELE 96
KELE
Sbjct: 77 KELE 80
>sp|B3DLF3|LYRM2_XENTR LYR motif-containing protein 2 OS=Xenopus tropicalis GN=lyrm2 PE=3
SV=1
Length = 87
Score = 35.0 bits (79), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Query: 15 MGDKLPNVECLALSTPVTHMSVSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQS 74
MG +LP L L + + +L LY+ +LR + P + Y RE+F+
Sbjct: 1 MGSRLPPA-ALTLKQFLV-----RQQVLGLYRKILRSVRQIPDAADQRYMQEWAREEFRR 54
Query: 75 NKNVDNNEQISLLYNEGLKELEVLKRQVLISQ 106
NK I ++ G ++L+ L+R + +++
Sbjct: 55 NKGATEEIAIRMMITHGQRQLQELERALHLAK 86
>sp|P54203|TRPB_PASMU Tryptophan synthase beta chain OS=Pasteurella multocida (strain
Pm70) GN=trpB PE=3 SV=2
Length = 402
Score = 34.7 bits (78), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Query: 58 YNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELEVLKRQVLISQLFKPDKLVIET 117
Y R L R R Q +K ++ LL+ K +VL Q+L+++ +++ ET
Sbjct: 53 YAGRPTALTRCRNLTQGSKTKLYLKREDLLHGGAHKTNQVLG-QILLAKRMGKTRIIAET 111
Query: 118 QMQNSKDTEQTALGCSLLGIPTKSYLSTMFSPRQISKSF 156
+ TAL C++LG+P + Y+ RQ F
Sbjct: 112 GA--GQHGVATALACAMLGMPCQIYMGAKDVERQSPNVF 148
>sp|Q5RES3|LYRM2_PONAB LYR motif-containing protein 2 OS=Pongo abelii GN=LYRM2 PE=3 SV=1
Length = 88
Score = 33.9 bits (76), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 36 VSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEG---L 92
V + +L LY+ +L+ + P + R Y RE+F+ NK+ + I ++ +G L
Sbjct: 17 VRRQQVLLLYRRILQTIRQVPNDSDRKYLKDWAREEFKRNKSATEEDTIRMMITQGNMQL 76
Query: 93 KELE 96
KELE
Sbjct: 77 KELE 80
>sp|Q9NU23|LYRM2_HUMAN LYR motif-containing protein 2 OS=Homo sapiens GN=LYRM2 PE=1 SV=1
Length = 88
Score = 33.9 bits (76), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 36 VSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEG---L 92
V + +L LY+ +L+ + P + R Y RE+F+ NK+ + I ++ +G L
Sbjct: 17 VRRQQVLLLYRRILQTIRQVPNDSDRKYLKDWAREEFRRNKSATEEDTIRMMITQGNMQL 76
Query: 93 KELE 96
KELE
Sbjct: 77 KELE 80
>sp|Q5RIM0|LYRM2_DANRE LYR motif-containing protein 2 OS=Danio rerio GN=lyrm2 PE=3 SV=1
Length = 88
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 37/70 (52%)
Query: 36 VSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKEL 95
+ + +L LY+ L R + P + R Y R++F+ NK+ + + I ++ ++ L
Sbjct: 17 LQRQKVLCLYRDLQRTIRRVPHESDRKYLRDWARDEFRRNKSNTDQDAIRMMISQAHNHL 76
Query: 96 EVLKRQVLIS 105
E L+R + ++
Sbjct: 77 EELRRSLALA 86
>sp|Q9HSC0|TRPB_HALSA Tryptophan synthase beta chain OS=Halobacterium salinarum (strain
ATCC 700922 / JCM 11081 / NRC-1) GN=trpB PE=3 SV=1
Length = 430
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 87 LYNEGLKELEVLKRQVLISQLFKPDKLVIETQMQNSKDTEQTALGCSLLGIPTKSYLSTM 146
L + G +L QVL+++ D++V ET + TA+ C+ L +P + Y+
Sbjct: 88 LLHGGAHKLNNALGQVLLAKYMGKDRIVAETGA--GQHGTATAMACAALEMPCEIYMGRT 145
Query: 147 FSPRQISKSFIQHVSDMDCYLFNIG 171
RQ F + D D +G
Sbjct: 146 DVNRQRPNVFRMRLHDADVNPVTVG 170
>sp|B0R332|TRPB_HALS3 Tryptophan synthase beta chain OS=Halobacterium salinarum (strain
ATCC 29341 / DSM 671 / R1) GN=trpB PE=3 SV=1
Length = 430
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 87 LYNEGLKELEVLKRQVLISQLFKPDKLVIETQMQNSKDTEQTALGCSLLGIPTKSYLSTM 146
L + G +L QVL+++ D++V ET + TA+ C+ L +P + Y+
Sbjct: 88 LLHGGAHKLNNALGQVLLAKYMGKDRIVAETGA--GQHGTATAMACAALEMPCEIYMGRT 145
Query: 147 FSPRQISKSFIQHVSDMDCYLFNIG 171
RQ F + D D +G
Sbjct: 146 DVNRQRPNVFRMRLHDADVNPVTVG 170
>sp|Q503U1|LYM5A_DANRE LYR motif-containing protein 5A OS=Danio rerio GN=lyrm5a PE=3 SV=1
Length = 85
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 41 ILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEG---LKELEV 97
+++LYK LL ++P YF R + F NK+V + E+I L + G +KELE
Sbjct: 9 VIRLYKNLLYLGREYPKGT--AYFRERLKTAFMKNKDVTDPEKIQKLIDRGDFVIKELEA 66
Query: 98 L----KRQVLISQLFKPD 111
L K + + + ++P+
Sbjct: 67 LYYLRKYRAMKKRYYEPE 84
>sp|A5CCZ2|HTPG_ORITB Chaperone protein HtpG OS=Orientia tsutsugamushi (strain Boryong)
GN=htpG PE=3 SV=1
Length = 630
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 9 RFYAKQMGDKLPNVEC--------LALSTPVTHMSVSKDMILKLYKALLRESSKFPAYNY 60
+++ + +GDK+ +VE + L+ P M + + L K L SSK N
Sbjct: 512 KYFKEVLGDKVKSVEVSKKLTRSPVCLTVPEGSMDIRTERFLIEQKQLSSHSSKILEINP 571
Query: 61 RMYFLRRTREKFQSNKNVDNNEQI 84
+++ E + N+N+D N+Q+
Sbjct: 572 NHTIIKKINENIKLNQNLDVNKQL 595
>sp|Q32LM5|LYRM2_BOVIN LYR motif-containing protein 2 OS=Bos taurus GN=LYRM2 PE=3 SV=1
Length = 88
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 36 VSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEG---L 92
+ + +L LY+ +L+ + P + R Y RE+F+ NK+ + I ++ +G L
Sbjct: 17 MRRQQVLLLYRRILQAIRQVPNDSDRKYLKDWAREEFKRNKSATEEDTIRMMITQGNMQL 76
Query: 93 KELE 96
KELE
Sbjct: 77 KELE 80
>sp|B5XFA7|LYRM2_SALSA LYR motif-containing protein 2 OS=Salmo salar GN=lyrm2 PE=3 SV=1
Length = 90
Score = 32.0 bits (71), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 28/56 (50%)
Query: 36 VSKDMILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEG 91
+ + +L LY+ ++R + P R Y R++F+ NKN N + I ++ +
Sbjct: 17 IQRQKVLSLYRNMMRTIRQVPDEGDRKYLRDWARDEFKRNKNSTNQDAIRMMITQA 72
>sp|Q3UN90|LYRM9_MOUSE LYR motif-containing protein 9 OS=Mus musculus GN=Lyrm9 PE=3 SV=1
Length = 78
Score = 31.6 bits (70), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 30/55 (54%)
Query: 42 LKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELE 96
L+LY+ LLR + P + ++ R+ FQ + + DN+E+I + +++ +
Sbjct: 14 LQLYRYLLRCCRQLPTKGIQEHYKHAVRQSFQVHSDEDNSERIQQIIKRAIEDAD 68
>sp|Q91V16|LYRM5_MOUSE LYR motif-containing protein 5 OS=Mus musculus GN=Lyrm5 PE=2 SV=1
Length = 86
Score = 30.8 bits (68), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 41 ILKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEG---LKELEV 97
+L LYK LL +P YF RR + F NK+V++ E+I L G +KELE
Sbjct: 9 VLTLYKNLLYLGRDYPKGA--DYFKRRLKNVFLKNKDVEDPEKIKELIARGEFVMKELEA 66
Query: 98 L 98
L
Sbjct: 67 L 67
>sp|Q9CQB7|LYRM1_MOUSE LYR motif-containing protein 1 OS=Mus musculus GN=Lyrm1 PE=2 SV=1
Length = 122
Score = 30.8 bits (68), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 35 SVSKDMILKLYKALLRESSKFPAYNYRM--------YFLRRTREKFQSNKNVDNNEQISL 86
+ ++ +L LY+++ R + K+ A + +M Y L+ R FQ NKN+ + E I
Sbjct: 3 AATRQEVLCLYRSIFRLARKWQAASGQMEDTIEEKQYILKEARTLFQKNKNLTDPELIKQ 62
Query: 87 LYNEGLKELEV 97
E +E+
Sbjct: 63 CIVECTARIEI 73
>sp|B2RYU8|LYRM1_RAT LYR motif-containing protein 1 OS=Rattus norvegicus GN=Lyrm1 PE=2
SV=1
Length = 122
Score = 30.4 bits (67), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 35 SVSKDMILKLYKALLRESSKFPAYNYRM--------YFLRRTREKFQSNKNVDNNEQISL 86
+ S+ +L LY++ R + K+ A + +M Y L R FQ NKN+ + + I
Sbjct: 3 AASRQEVLGLYRSFFRLARKWQAASGQMEDTIKEKQYILNEARTLFQKNKNLTDPDLIKQ 62
Query: 87 LYNEGLKELEV 97
+E +E+
Sbjct: 63 CIDECTARIEI 73
>sp|B2RZD7|LYRM9_RAT LYR motif-containing protein 9 OS=Rattus norvegicus GN=Lyrm9 PE=3
SV=1
Length = 78
Score = 30.4 bits (67), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 29/55 (52%)
Query: 42 LKLYKALLRESSKFPAYNYRMYFLRRTREKFQSNKNVDNNEQISLLYNEGLKELE 96
L+LY+ LLR + P + ++ R+ FQ + + DN E+I + +++ +
Sbjct: 14 LQLYRYLLRCCRQLPTKGIQEHYKHAVRQSFQVHSDEDNPERIQQIIRRAIEDAD 68
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,112,484
Number of Sequences: 539616
Number of extensions: 2668734
Number of successful extensions: 6741
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 6708
Number of HSP's gapped (non-prelim): 48
length of query: 216
length of database: 191,569,459
effective HSP length: 113
effective length of query: 103
effective length of database: 130,592,851
effective search space: 13451063653
effective search space used: 13451063653
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)