RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy2089
         (216 letters)



>d1jb0a_ f.29.1.1 (A:) Apoprotein a1, PsaA {Synechococcus elongatus
           [TaxId: 32046]}
          Length = 743

 Score = 26.3 bits (58), Expect = 3.3
 Identities = 8/34 (23%), Positives = 12/34 (35%), Gaps = 3/34 (8%)

Query: 160 VSDMDCYLFNIGLI---KLIFFLTWFRLQFSTPS 190
            ++   Y   IG +    L+ F  WF      P 
Sbjct: 141 TNEFQLYCTAIGGLVMAGLMLFAGWFHYHKRAPK 174


>d1nd6a_ c.60.1.2 (A:) Prostatic acid phosphatase {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 342

 Score = 26.0 bits (56), Expect = 3.7
 Identities = 10/93 (10%), Positives = 22/93 (23%), Gaps = 9/93 (9%)

Query: 5   PAQGRFYAKQMGDKLPNVECLALSTPVTHMSVSKDMILKLYKALLRESSKFPAYNYRMYF 64
             QG     ++ + +     +     +   S     +  L  AL   +   P Y      
Sbjct: 225 RLQGGVLVNEILNHMKRATQIPSYKKLIMYSAHDTTVSGLQMALDVYNGLLPPYASCHLT 284

Query: 65  LRRTREKFQSNKNVDNNEQISLLYNEGLKELEV 97
                E +           + + Y    +    
Sbjct: 285 -----ELYFEK----GEYFVEMYYRNETQHEPY 308


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.136    0.387 

Gapped
Lambda     K      H
   0.267   0.0499    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 729,158
Number of extensions: 30519
Number of successful extensions: 57
Number of sequences better than 10.0: 1
Number of HSP's gapped: 57
Number of HSP's successfully gapped: 5
Length of query: 216
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 134
Effective length of database: 1,281,736
Effective search space: 171752624
Effective search space used: 171752624
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.0 bits)