BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy21
(288 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328785544|ref|XP_396670.3| PREDICTED: lamin Dm0-like [Apis mellifera]
gi|380029157|ref|XP_003698248.1| PREDICTED: lamin Dm0-like [Apis florea]
Length = 597
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/154 (52%), Positives = 110/154 (71%), Gaps = 8/154 (5%)
Query: 23 MNVSGAGSSSVAG----TPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEI 78
+N++ SSS A TPSR + KRK +LEE SEERTS+ + V+ +++G++EI
Sbjct: 401 LNINPVQSSSTASSGRTTPSRHTPLRGGKRKRTLLEE--SEERTSTDYSVSGTSRGDIEI 458
Query: 79 TEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNV 138
TE DP G+FVKL NKG++E L WQ++RK G ++T FKFHRT K+EAG TV VWS ++
Sbjct: 459 TEADPQGRFVKLTNKGNKEMGLSGWQIIRKA-GSLETVFKFHRTAKLEAGATVMVWSADI 517
Query: 139 EGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
GA+HEPP NIVMK QK+ + D ++TILLN +GE
Sbjct: 518 -GASHEPPSNIVMKGQKWFTADIMTTILLNNEGE 550
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 69/97 (71%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFAR----MEAEIKRLQT 248
EL++T+ R + ++NEL AAN LT R ++LE+ E E+++ A +E E+ R++
Sbjct: 305 ELRQTRTRIDTLNQKINELEAANNALTARIRDLENLRENEKARHAESVASLEEELARIRD 364
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM +QLK+Y++LM+IKI LD+EIA YR L+E+EES L
Sbjct: 365 EMAQQLKEYQDLMDIKIGLDLEIAAYRKLLESEESRL 401
>gi|194759125|ref|XP_001961800.1| GF15147 [Drosophila ananassae]
gi|190615497|gb|EDV31021.1| GF15147 [Drosophila ananassae]
Length = 624
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 115/151 (76%), Gaps = 5/151 (3%)
Query: 31 SSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKL 90
SS TPSR + + ++KRK +++E SE+R+ S + V++SAKGN+EI E+DP+GKFVKL
Sbjct: 432 SSTRATPSRRTPSGAQKRKRAMVDE--SEDRSVSDYYVSASAKGNVEIKEIDPEGKFVKL 489
Query: 91 YNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNI 149
+NKG++E ++G WQL R + + T++KFHR++KIE G TVTVWS + + A+HEPP NI
Sbjct: 490 FNKGTDEVAIGGWQLQRLINESGPSTTYKFHRSVKIEPGATVTVWSSDTK-ASHEPPSNI 548
Query: 150 VMKNQKFGSGDEISTILLNTDGE-LANQERI 179
VMK+QK+ +GD T+LLN DGE +AN +R+
Sbjct: 549 VMKSQKWVAGDNTRTVLLNADGEAVANLDRV 579
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQT 248
EL+ T+ R + ++N+L + N L R +ELE Q++ ++ + A +E E+ RL+
Sbjct: 317 ELRSTRVRIDGLNAKINDLESTNAVLNARIRELEQQLDNDRERHGQEVALLEKELIRLRD 376
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM QL++Y++LM+IK++LD+EIA Y L+ EE+ L
Sbjct: 377 EMATQLQEYQDLMDIKVSLDLEIAAYDKLLVGEEARL 413
>gi|195034692|ref|XP_001988956.1| GH10295 [Drosophila grimshawi]
gi|193904956|gb|EDW03823.1| GH10295 [Drosophila grimshawi]
Length = 625
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 117/169 (69%), Gaps = 15/169 (8%)
Query: 23 MNVSGAGSSSVA----------GTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSA 72
+N++ A S++V TPSR + + KRK +++E SE+R+ S F V++SA
Sbjct: 412 LNITPANSATVQSFSQSLRSSRATPSRRTPSGGLKRKRAVVDE--SEDRSVSDFYVSASA 469
Query: 73 KGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTV 131
KGN+EI E+DP+GK+VKLYNKGS+E ++G WQL R V G T++KFHR++KIE TV
Sbjct: 470 KGNVEIKEIDPEGKYVKLYNKGSDEIAIGGWQLQRSVNDGGPVTTYKFHRSVKIEPNATV 529
Query: 132 TVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERI 179
TVWS + A+HEPP NIVMK QK+ +GD T LLN+DGE +AN ERI
Sbjct: 530 TVWSSDSR-ASHEPPSNIVMKQQKWITGDNTKTALLNSDGEAVANLERI 577
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQT 248
EL+ ++ R + ++N+L + N L R +ELE Q++ E+ + A +E E+ RL+
Sbjct: 316 ELRNSRIRIDGLNAKINDLESTNAVLNVRIRELEQQLDNERERHSNDIAMLEKELHRLRD 375
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM QL++Y++LM+IK++LD+EIA Y L+ EE+ L
Sbjct: 376 EMAHQLQEYQDLMDIKVSLDLEIAAYDKLLVGEEARL 412
>gi|195388484|ref|XP_002052910.1| GJ19583 [Drosophila virilis]
gi|194149367|gb|EDW65065.1| GJ19583 [Drosophila virilis]
Length = 623
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 115/169 (68%), Gaps = 15/169 (8%)
Query: 23 MNVSGAGSSSVA----------GTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSA 72
+N++ A S++V TPSR + + KRK +++E SE+R+ S F V++SA
Sbjct: 413 LNITPANSATVQSFSQSLRSTRATPSRRTPSGGLKRKRAVVDE--SEDRSVSDFYVSASA 470
Query: 73 KGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGE-VKTSFKFHRTLKIEAGGTV 131
KGN+EI E+DP+GKFVKLYNKG++E S+G WQL R + T++KFHR++KIE TV
Sbjct: 471 KGNIEIKEIDPEGKFVKLYNKGNDEVSIGGWQLQRSINDSGPATTYKFHRSVKIEPNATV 530
Query: 132 TVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERI 179
TVWS + ATHEPP NIVMK QK+ +GD T LLN DGE +AN ERI
Sbjct: 531 TVWSSDSR-ATHEPPSNIVMKQQKWITGDNTKTTLLNGDGETVANLERI 578
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQT 248
EL+ ++ R + ++N+L + N L R +ELE Q++ ++ + A +E E+ RL+
Sbjct: 317 ELRNSRIRIDGLNAKINDLESTNAVLNARIRELEQQLDIDRERHGNDIAMLEKELLRLRE 376
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM QL++Y++LM+IK++LD+EIA Y L+ EE+ L
Sbjct: 377 EMAHQLQEYQDLMDIKVSLDLEIAAYDKLLVGEEARL 413
>gi|340722208|ref|XP_003399500.1| PREDICTED: lamin Dm0-like [Bombus terrestris]
Length = 599
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 117/176 (66%), Gaps = 8/176 (4%)
Query: 1 MGVVFETRIEEVQKKRKTELLCMNVSGAGSSSVAG----TPSRGSVAPSKKRKLNILEEY 56
+ V + I +K ++E +N+ SSS A TPSR + KRK +LEE
Sbjct: 381 IKVALDLEIAAYRKLLESEEARLNIMPVQSSSTASSGRTTPSRHTPLRGGKRKRTLLEE- 439
Query: 57 ESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTS 116
SEER+S+ + V+ +++G++EITE DP G+FVKL NKG++E L WQ++RK G ++T
Sbjct: 440 -SEERSSTDYSVSGTSRGDIEITEADPQGRFVKLTNKGNKEIGLSGWQIIRKA-GSLETV 497
Query: 117 FKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
FKFHRT K+EAG TV VWS ++ GATHEPP NIVMK QK+ + D ++T LLN DGE
Sbjct: 498 FKFHRTAKLEAGATVMVWSADI-GATHEPPSNIVMKGQKWFTSDVMTTTLLNNDGE 552
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 68/97 (70%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFAR----MEAEIKRLQT 248
EL++T+ R + +NEL A+N + R ++LE+ E E+++ A +EAE+ R++
Sbjct: 307 ELRQTRTRIDTLNQRINELEASNNAFSARIRDLENLRENEKARHAENVASLEAELARIRD 366
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM +Q+++Y++LM+IK+ LD+EIA YR L+E+EE+ L
Sbjct: 367 EMAQQIQEYQDLMDIKVALDLEIAAYRKLLESEEARL 403
>gi|383850116|ref|XP_003700663.1| PREDICTED: lamin Dm0-like [Megachile rotundata]
Length = 599
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 101/137 (73%), Gaps = 4/137 (2%)
Query: 36 TPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGS 95
TPSR + KRK +LEE SEER+S+ + VT +A+G++EITE DP G+FVKL NKG+
Sbjct: 420 TPSRHTPLRGGKRKRTLLEE--SEERSSTDYSVTGTARGDIEITEADPQGRFVKLTNKGN 477
Query: 96 EEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK 155
+EQ L WQ++RK G ++T FKFHRT KI+AG V VWS ++ GATHEPP NIVMK QK
Sbjct: 478 KEQGLSGWQIIRKA-GSLETIFKFHRTAKIDAGANVLVWSADI-GATHEPPSNIVMKGQK 535
Query: 156 FGSGDEISTILLNTDGE 172
+ + D ++T LLN +GE
Sbjct: 536 WFTADTMTTTLLNNEGE 552
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 69/97 (71%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQT 248
EL++T+ R + ++NEL A+N L R ++LE+ E E+++ A +EAE+ R++
Sbjct: 306 ELRQTRTRIDTLNQKINELEASNNALNARIRDLENLRENEKARHAESLASLEAELARIRD 365
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM +QL++Y++LM+IK+ LD+EIA YR L+E+EE+ L
Sbjct: 366 EMAQQLQEYQDLMDIKVALDLEIAAYRKLLESEEARL 402
>gi|350396311|ref|XP_003484509.1| PREDICTED: lamin Dm0-like [Bombus impatiens]
Length = 599
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 116/176 (65%), Gaps = 8/176 (4%)
Query: 1 MGVVFETRIEEVQKKRKTELLCMNVSGAGSSSVAG----TPSRGSVAPSKKRKLNILEEY 56
+ V + I +K ++E +N+ SSS A TPSR + KRK +LEE
Sbjct: 381 IKVALDLEIAAYRKLLESEEARLNIMPVQSSSTASSGRTTPSRHTPLRGGKRKRTLLEE- 439
Query: 57 ESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTS 116
SEER+S+ + V+ +++G++EITE DP G+FVKL NKG++E L WQ++RK ++T
Sbjct: 440 -SEERSSTDYSVSGTSRGDIEITEADPQGRFVKLTNKGNKEIGLSGWQIIRKASS-LETV 497
Query: 117 FKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
FKFHRT K+EAG TV VWS ++ GATHEPP NIVMK QK+ + D ++T LLN DGE
Sbjct: 498 FKFHRTAKLEAGATVMVWSADI-GATHEPPSNIVMKGQKWFTSDVMTTTLLNNDGE 552
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 68/97 (70%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFAR----MEAEIKRLQT 248
EL++T+ R + +NEL A+N + R ++LE+ E E+++ A +EAE+ R++
Sbjct: 307 ELRQTRTRIDTLNQRINELEASNNAFSARIRDLENLRENEKARHAENVASLEAELARIRD 366
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM +Q+++Y++LM+IK+ LD+EIA YR L+E+EE+ L
Sbjct: 367 EMAQQIQEYQDLMDIKVALDLEIAAYRKLLESEEARL 403
>gi|156544736|ref|XP_001605883.1| PREDICTED: lamin Dm0-like isoform 1 [Nasonia vitripennis]
Length = 603
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 122/182 (67%), Gaps = 10/182 (5%)
Query: 3 VVFETRIEEVQKKRKTELLCMNVSGAGSSSVA-----GTPSRGSVAPSKKRKLNILEEYE 57
V + I +K ++E +N++ S SV+ TPSR + KRK +LEE
Sbjct: 387 VALDLEIAAYRKLLESEEARLNITPIQSPSVSVSGSRATPSRQTPIRGGKRKRTLLEE-- 444
Query: 58 SEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSF 117
SEER++S + V+ SA+G++EITE +P G++VKL NKGS+E +L W +VRK G ++T F
Sbjct: 445 SEERSTSDYSVSVSARGDVEITEAEPQGRYVKLTNKGSKEIALSGWTVVRKA-GTLETVF 503
Query: 118 KFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDG-ELANQ 176
KFHRT K+E G TV+VWS ++ GATHEPP NIVMK QK+ +GD ++T L+N +G E+A
Sbjct: 504 KFHRTAKLEPGATVSVWSADI-GATHEPPANIVMKGQKWFTGDNMTTTLINNEGEEMATS 562
Query: 177 ER 178
ER
Sbjct: 563 ER 564
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 69/97 (71%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQT 248
EL++ + R+ + ++EL AAN L+ R ++LE+ E E+S+ A +EAE+ R++
Sbjct: 311 ELRQIRTRNESLNQRISELEAANNALSSRIRDLENLRENERSRHTENLAALEAELARMRD 370
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM +QL++Y++LM+I++ LD+EIA YR L+E+EE+ L
Sbjct: 371 EMAQQLQEYQDLMDIRVALDLEIAAYRKLLESEEARL 407
>gi|345480744|ref|XP_003424206.1| PREDICTED: lamin Dm0-like isoform 2 [Nasonia vitripennis]
Length = 600
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 122/182 (67%), Gaps = 10/182 (5%)
Query: 3 VVFETRIEEVQKKRKTELLCMNVSGAGSSSVA-----GTPSRGSVAPSKKRKLNILEEYE 57
V + I +K ++E +N++ S SV+ TPSR + KRK +LEE
Sbjct: 387 VALDLEIAAYRKLLESEEARLNITPIQSPSVSVSGSRATPSRQTPIRGGKRKRTLLEE-- 444
Query: 58 SEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSF 117
SEER++S + V+ SA+G++EITE +P G++VKL NKGS+E +L W +VRK G ++T F
Sbjct: 445 SEERSTSDYSVSVSARGDVEITEAEPQGRYVKLTNKGSKEIALSGWTVVRKA-GTLETVF 503
Query: 118 KFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDG-ELANQ 176
KFHRT K+E G TV+VWS ++ GATHEPP NIVMK QK+ +GD ++T L+N +G E+A
Sbjct: 504 KFHRTAKLEPGATVSVWSADI-GATHEPPANIVMKGQKWFTGDNMTTTLINNEGEEMATS 562
Query: 177 ER 178
ER
Sbjct: 563 ER 564
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 69/97 (71%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQT 248
EL++ + R+ + ++EL AAN L+ R ++LE+ E E+S+ A +EAE+ R++
Sbjct: 311 ELRQIRTRNESLNQRISELEAANNALSSRIRDLENLRENERSRHTENLAALEAELARMRD 370
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM +QL++Y++LM+I++ LD+EIA YR L+E+EE+ L
Sbjct: 371 EMAQQLQEYQDLMDIRVALDLEIAAYRKLLESEEARL 407
>gi|60099934|gb|AAX13101.1| lamin [Drosophila miranda]
gi|60099936|gb|AAX13102.1| lamin [Drosophila miranda]
gi|60099938|gb|AAX13103.1| lamin [Drosophila miranda]
gi|60099940|gb|AAX13104.1| lamin [Drosophila miranda]
gi|60099942|gb|AAX13105.1| lamin [Drosophila miranda]
gi|60099944|gb|AAX13106.1| lamin [Drosophila miranda]
gi|60099946|gb|AAX13107.1| lamin [Drosophila miranda]
gi|60099948|gb|AAX13108.1| lamin [Drosophila miranda]
gi|60099950|gb|AAX13109.1| lamin [Drosophila miranda]
gi|60099952|gb|AAX13110.1| lamin [Drosophila miranda]
Length = 499
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 111/151 (73%), Gaps = 5/151 (3%)
Query: 31 SSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKL 90
SS TPSR + + + KRK ++E SE+R+ S + V++SA+GN+EI E+DP+GKFVK+
Sbjct: 321 SSTRATPSRRTPSGALKRKRTFVDE--SEDRSVSDYYVSASARGNIEIKEIDPEGKFVKI 378
Query: 91 YNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNI 149
+NKG+EE ++G WQL R V + ++KFHR++KI+A VTVWS + + A+HEPP NI
Sbjct: 379 FNKGNEEVAIGGWQLQRIVNESGPSNTYKFHRSVKIDANAFVTVWSVDSK-ASHEPPTNI 437
Query: 150 VMKNQKFGSGDEISTILLNTDGE-LANQERI 179
VMK QK+ +GD TILLNTDGE +AN +RI
Sbjct: 438 VMKQQKWITGDNTKTILLNTDGETVANLDRI 468
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQT 248
E + T+ R + ++ +L N L R +ELE Q++ ++ + A +E E+ RL+
Sbjct: 206 EQRTTRVRIDGLNAKITDLEQTNSMLNGRIRELEHQLDNDRERHSQEVAMLEKELIRLRD 265
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EMT+QL++Y++LM+IK++LD+EIA Y L+ EE L
Sbjct: 266 EMTQQLQEYQDLMDIKVSLDLEIAAYDKLLMGEEHRL 302
>gi|157136232|ref|XP_001656786.1| lamin [Aedes aegypti]
gi|108881054|gb|EAT45279.1| AAEL003415-PA [Aedes aegypti]
Length = 558
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 110/153 (71%), Gaps = 9/153 (5%)
Query: 28 AGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKF 87
A S ++ TP R + KRK +LEE S+ER+ S F VTSSAKG++EI+EVDP+GKF
Sbjct: 375 ARSGAMRRTPQRAAA----KRKRTVLEE--SDERSVSDFSVTSSAKGDIEISEVDPEGKF 428
Query: 88 VKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPH 147
VKL+NK ++E +G W LVRKV G +T FKFHRTLK++ G VTVWS ++ G THEPP
Sbjct: 429 VKLHNKSAKEVQIGGWTLVRKV-GTNETVFKFHRTLKVDGGSFVTVWSSDL-GQTHEPPS 486
Query: 148 NIVMKNQKFGSGDEISTILLNTDG-ELANQERI 179
IVMK QK+ +GD ++T L+N +G E+A ER+
Sbjct: 487 TIVMKGQKWFAGDNMTTQLVNGEGEEVAASERV 519
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 59/88 (67%), Gaps = 5/88 (5%)
Query: 203 KYDTEMNELRAANYRLTE-RNKELEDQIEYEQSKFA----RMEAEIKRLQTEMTEQLKDY 257
+YD +M R L E R ++LE Q+ E+ + A +++ EI+RL+ ++++QL++Y
Sbjct: 267 QYDGQMRANRDEISELYESRLRDLELQLNAERQRHAEEKSKLQDEIERLRNQISQQLQEY 326
Query: 258 RELMEIKINLDVEIAQYRNLMEAEESSL 285
++LM+IKI+LD+EIA Y L+ +EE L
Sbjct: 327 QDLMDIKISLDMEIAAYDKLLSSEEVRL 354
>gi|60099928|gb|AAX13098.1| lamin [Drosophila pseudoobscura]
Length = 499
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 110/151 (72%), Gaps = 5/151 (3%)
Query: 31 SSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKL 90
SS TPSR + + + KRK ++E SE+R+ S + V++SAKGN+EI E+DP+GKFVK+
Sbjct: 321 SSTRATPSRRTPSGALKRKRTFVDE--SEDRSVSDYYVSASAKGNIEIKEIDPEGKFVKI 378
Query: 91 YNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNI 149
+NKG+EE ++G WQL R V + ++KFHR++KI+A VTVWS + + A+HEPP NI
Sbjct: 379 FNKGNEEVAIGGWQLQRIVNENGPSNTYKFHRSVKIDANAYVTVWSVDSK-ASHEPPTNI 437
Query: 150 VMKNQKFGSGDEISTILLNTDGE-LANQERI 179
VMK QK+ +GD TILLN DGE +AN +RI
Sbjct: 438 VMKQQKWITGDNTKTILLNIDGETVANLDRI 468
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 62/97 (63%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQT 248
E + T+ R + ++++L N L R +ELE Q++ ++ + A +E E+ RL+
Sbjct: 206 EQRTTRVRIDGLNAKISDLEQTNSMLNGRIRELEHQLDNDRERHSQEVAMLERELIRLRD 265
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EMT+QL++Y++LM+IK++LD+EIA Y L+ EE L
Sbjct: 266 EMTQQLQEYQDLMDIKVSLDLEIAAYDKLLMGEEHRL 302
>gi|195118100|ref|XP_002003578.1| GI17991 [Drosophila mojavensis]
gi|193914153|gb|EDW13020.1| GI17991 [Drosophila mojavensis]
Length = 624
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 114/169 (67%), Gaps = 17/169 (10%)
Query: 23 MNVSGAGSSSVA----------GTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSA 72
+N++ A S++V TPSR + + KRK +EE SE+ + S F V++SA
Sbjct: 414 LNITPANSATVQSFSQSLRSSRATPSRRTPSGGLKRKRAAVEE--SEDHSVSDFYVSASA 471
Query: 73 KGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKV--QGEVKTSFKFHRTLKIEAGGT 130
KGN+EI E+D DGK+VKLYNKG+EE S+G WQL R + G V T++KFHR++KIE GT
Sbjct: 472 KGNVEIKEIDADGKYVKLYNKGTEEVSIGGWQLQRSLNDNGPV-TTYKFHRSVKIEPNGT 530
Query: 131 VTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQER 178
VTVWS + ATHEPP NIVMK QK+ +GD LLN++GE +AN ER
Sbjct: 531 VTVWSSDSR-ATHEPPSNIVMKQQKWMTGDNTKMALLNSEGETVANMER 578
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 65/97 (67%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFAR----MEAEIKRLQT 248
EL+ ++ R + ++N++ AAN L R +ELE Q+++E+ + A + E+ RL+
Sbjct: 318 ELRNSRIRIDGLNAKLNDMEAANAMLNTRIRELEQQLDHERERHANDIAMYDKELNRLRE 377
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM +QL++Y++LM+IK++LD+EIA Y L+ EE+ L
Sbjct: 378 EMAQQLQEYQDLMDIKVSLDLEIAAYDKLLVGEEARL 414
>gi|60099930|gb|AAX13099.1| lamin [Drosophila miranda]
gi|60099932|gb|AAX13100.1| lamin [Drosophila miranda]
Length = 499
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 111/151 (73%), Gaps = 5/151 (3%)
Query: 31 SSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKL 90
SS TPSR + + + KRK ++E SE+R+ S + V++SA+GN+EI E+DP+GKFVK+
Sbjct: 321 SSTRATPSRRTPSGALKRKRTFVDE--SEDRSVSDYYVSASARGNIEIKEIDPEGKFVKI 378
Query: 91 YNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNI 149
+NKG+EE ++G WQL R V + ++KFHR++KI+A VTVWS + + A+HEPP NI
Sbjct: 379 FNKGNEEVAIGGWQLQRIVNESGPSNTYKFHRSVKIDAKSFVTVWSVDSK-ASHEPPTNI 437
Query: 150 VMKNQKFGSGDEISTILLNTDGE-LANQERI 179
VMK QK+ +GD TILLNTDGE +AN +RI
Sbjct: 438 VMKQQKWITGDNTKTILLNTDGETVANLDRI 468
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQT 248
E + T+ R + ++ +L N L R +ELE Q++ ++ + A +E E+ RL+
Sbjct: 206 EQRTTRVRIDGLNAKITDLEQTNSMLNGRIRELEHQLDNDRERHSQEVAMLEKELIRLRD 265
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EMT+QL++Y++LM+IK++LD+EIA Y L+ EE L
Sbjct: 266 EMTQQLQEYQDLMDIKVSLDLEIAAYDKLLMGEEHRL 302
>gi|60099954|gb|AAX13111.1| lamin [Drosophila affinis]
Length = 499
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 111/151 (73%), Gaps = 5/151 (3%)
Query: 31 SSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKL 90
+S TPSR + + + KRK ++EE SE+R+ S + VT++AKGN+EI E+DP+GKFVKL
Sbjct: 321 TSTRATPSRRTPSGALKRKRAVVEE--SEDRSVSDYYVTATAKGNVEIKEIDPEGKFVKL 378
Query: 91 YNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNI 149
+NKG+EE ++G WQL R V + T +KF+R++KI+A VTVWS + + ATHEPP NI
Sbjct: 379 FNKGNEEVAIGGWQLQRMVIESGSSTIYKFNRSVKIDANAFVTVWSADTK-ATHEPPTNI 437
Query: 150 VMKNQKFGSGDEISTILLNTDGE-LANQERI 179
VMK QK+ +GD TIL+N DGE +AN +RI
Sbjct: 438 VMKTQKWIAGDNTKTILVNGDGETVANLDRI 468
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 62/97 (63%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQT 248
E + T+ R + ++N+L N L R +ELE Q++ ++ + A +E E+ RL+
Sbjct: 206 EQRSTRVRIDGLNAKINDLEQTNTMLNSRIRELEHQLDNDRERHGQEVAMLEKELIRLRD 265
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EMT+QL++Y++LM+IK++LD+EIA Y L+ EE L
Sbjct: 266 EMTQQLQEYQDLMDIKVSLDLEIAAYDKLLMGEEHRL 302
>gi|125987443|ref|XP_001357484.1| Lam [Drosophila pseudoobscura pseudoobscura]
gi|54645816|gb|EAL34554.1| Lam [Drosophila pseudoobscura pseudoobscura]
Length = 617
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 110/151 (72%), Gaps = 5/151 (3%)
Query: 31 SSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKL 90
SS TPSR + + + KRK ++E SE+R+ S + V++SAKGN+EI E+DP+GKFVK+
Sbjct: 425 SSTRATPSRRTPSGALKRKRTFVDE--SEDRSVSDYYVSASAKGNIEIKEIDPEGKFVKI 482
Query: 91 YNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNI 149
+NKG+EE ++G WQL R V + ++KFHR++KI+A VTVWS + + A+HEPP NI
Sbjct: 483 FNKGNEEVAIGGWQLQRIVNENGPSNTYKFHRSVKIDANAYVTVWSVDSK-ASHEPPTNI 541
Query: 150 VMKNQKFGSGDEISTILLNTDGE-LANQERI 179
VMK QK+ +GD TILLN DGE +AN +RI
Sbjct: 542 VMKQQKWITGDNTKTILLNIDGETVANLDRI 572
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 62/97 (63%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQT 248
E + T+ R + ++++L N L R +ELE Q++ ++ + A +E E+ RL+
Sbjct: 310 EQRTTRVRIDGLNAKISDLEQTNSMLNGRIRELEHQLDNDRERHSQEVAMLERELIRLRD 369
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EMT+QL++Y++LM+IK++LD+EIA Y L+ EE L
Sbjct: 370 EMTQQLQEYQDLMDIKVSLDLEIAAYDKLLMGEEHRL 406
>gi|170047997|ref|XP_001851487.1| lamin [Culex quinquefasciatus]
gi|167870238|gb|EDS33621.1| lamin [Culex quinquefasciatus]
Length = 554
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 81/146 (55%), Positives = 105/146 (71%), Gaps = 9/146 (6%)
Query: 35 GTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG 94
GTP+R KRK +LEE S+ER+ S + VTSSAKG++EI+EVD +GKFVKL+NK
Sbjct: 378 GTPTRAGA----KRKRTVLEE--SDERSVSDYSVTSSAKGDIEISEVDSEGKFVKLHNKS 431
Query: 95 SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ 154
++E +G W +VRKV G +T FKFHRTLKI+ G VTVWS ++ G THEPP IVMK Q
Sbjct: 432 AKEVQIGGWTVVRKV-GTNETVFKFHRTLKIDGGAFVTVWSSDL-GHTHEPPSTIVMKGQ 489
Query: 155 KFGSGDEISTILLNTDG-ELANQERI 179
K+ GD ++T LLN +G E+A ER+
Sbjct: 490 KWFCGDNMTTQLLNVEGEEVAASERV 515
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 221 RNKELEDQIEYEQSKFA----RMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRN 276
R ++LE Q+ E+ + A +++ EI+RL+ E++ QL++Y++LM+IKI LD+EIA Y
Sbjct: 280 RLRDLELQLNAERQRHAAEKSKLQDEIERLRKEISLQLQEYQDLMDIKITLDMEIAAYDK 339
Query: 277 LMEAEESSL 285
L+ +EE L
Sbjct: 340 LLSSEEVRL 348
>gi|195155466|ref|XP_002018625.1| GL25852 [Drosophila persimilis]
gi|194114778|gb|EDW36821.1| GL25852 [Drosophila persimilis]
Length = 284
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 110/151 (72%), Gaps = 5/151 (3%)
Query: 31 SSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKL 90
SS TPSR + + + KRK ++E SE+R+ S + V++SAKGN+EI E+DP+GKFVK+
Sbjct: 92 SSTRATPSRRTPSGALKRKRTFVDE--SEDRSVSDYYVSASAKGNIEIKEIDPEGKFVKI 149
Query: 91 YNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNI 149
+NKG+EE ++G WQL R V + ++KFHR++KI+A VTVWS + + A+HEPP NI
Sbjct: 150 FNKGNEEVAIGGWQLQRIVNESGPSNTYKFHRSVKIDANAYVTVWSVDSK-ASHEPPTNI 208
Query: 150 VMKNQKFGSGDEISTILLNTDGE-LANQERI 179
VMK QK+ +GD TILLN DGE +AN +RI
Sbjct: 209 VMKQQKWITGDNTKTILLNIDGETVANLDRI 239
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%)
Query: 215 NYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQY 274
N R+ E +L++ E + A +E E+ RL+ EMT+QL++Y++LM+IK++LD+EIA Y
Sbjct: 3 NGRIRELEHQLDNDRERHSQEVAMLERELIRLRDEMTQQLQEYQDLMDIKVSLDLEIAAY 62
Query: 275 RNLMEAEESSL 285
L+ EE L
Sbjct: 63 DKLLMGEEHRL 73
>gi|195473854|ref|XP_002089207.1| GE25472 [Drosophila yakuba]
gi|194175308|gb|EDW88919.1| GE25472 [Drosophila yakuba]
Length = 624
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 113/151 (74%), Gaps = 5/151 (3%)
Query: 31 SSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKL 90
SS TPSR + + + KRK +++E SE+ + S + V++SAKGN+EI E+DP+GKFV+L
Sbjct: 432 SSTRATPSRRTPSGAVKRKRAVVDE--SEDHSVSDYYVSASAKGNVEIKEIDPEGKFVRL 489
Query: 91 YNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNI 149
+NKGS+E ++G WQL R + +G T++KFHR++KIE G VTVWS + + A+HEPP ++
Sbjct: 490 FNKGSDEVAIGGWQLQRLINEGGPSTTYKFHRSVKIEPNGVVTVWSADTK-ASHEPPSSL 548
Query: 150 VMKNQKFGSGDEISTILLNTDGE-LANQERI 179
VMK+QK+ + D TILLN++GE +AN +R+
Sbjct: 549 VMKSQKWVAADNTRTILLNSEGEAVANLDRV 579
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQT 248
EL+ T+ R + ++N+L N L R +ELE Q++ ++ + A +E E+ RL+
Sbjct: 316 ELRSTRVRIDGLNAKINDLEQTNADLNARIRELERQLDNDRERHGQEIALLEKELIRLRE 375
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EMT+QL++Y++LM+IK++LD+EIA Y L+ EE+ L
Sbjct: 376 EMTQQLQEYQDLMDIKVSLDLEIAAYDKLLVGEEARL 412
>gi|195443080|ref|XP_002069267.1| GK21105 [Drosophila willistoni]
gi|194165352|gb|EDW80253.1| GK21105 [Drosophila willistoni]
Length = 623
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 106/151 (70%), Gaps = 5/151 (3%)
Query: 31 SSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKL 90
SS TPSR + + + KRK ++E SE+R+ S F ++++AKGN+EI E+D DGKF+KL
Sbjct: 429 SSTRSTPSRRTPSGALKRKRAFVDE--SEDRSVSDFYISANAKGNVEIKEIDADGKFIKL 486
Query: 91 YNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNI 149
YNKG+EE ++G WQL R + + ++KFHR++KIE +VTVWS + A HEPP NI
Sbjct: 487 YNKGAEEIAIGGWQLQRLINENGPSVTYKFHRSVKIEPNSSVTVWSSDSR-AQHEPPTNI 545
Query: 150 VMKNQKFGSGDEISTILLNTDGE-LANQERI 179
VMK QK+ GD TILLN DGE +AN ERI
Sbjct: 546 VMKQQKWTIGDNTKTILLNGDGEAVANLERI 576
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 65/97 (67%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQI----EYEQSKFARMEAEIKRLQT 248
EL+ T+ R + ++N+L A N L R +ELE Q+ E+ + + A +E E+ RL+
Sbjct: 313 ELRSTRVRIDGLNAKINDLEATNGALNARIRELEKQLDNDLEHHRQEVALLEKELIRLRE 372
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EMT+QL++Y++LM+IK++LD+EIA Y L+ EE+ L
Sbjct: 373 EMTQQLQEYQDLMDIKVSLDLEIAAYDKLLMGEEARL 409
>gi|195342751|ref|XP_002037962.1| GM18554 [Drosophila sechellia]
gi|194132812|gb|EDW54380.1| GM18554 [Drosophila sechellia]
Length = 622
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 111/151 (73%), Gaps = 5/151 (3%)
Query: 31 SSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKL 90
+S TPSR + + + KRK +++E SE+ + S + V++SAKG++EI E+DP+GKFV+L
Sbjct: 430 NSTRATPSRRTPSAAVKRKRAVVDE--SEDHSVSDYYVSASAKGSVEIKEIDPEGKFVRL 487
Query: 91 YNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNI 149
+NKGS+E ++G WQL R + + T++KFHR++KIE G +TVWS + A+HEPP ++
Sbjct: 488 FNKGSDEVAIGGWQLQRLINENGPSTTYKFHRSVKIEPNGVITVWSADTR-ASHEPPSSL 546
Query: 150 VMKNQKFGSGDEISTILLNTDGE-LANQERI 179
VMK+QK+ S D TILLN+DGE +AN +RI
Sbjct: 547 VMKSQKWVSADNTRTILLNSDGEAVANLDRI 577
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFAR----MEAEIKRLQT 248
EL+ T+ R + +++L AN L R +ELE Q++ ++ + + +E E+ RL+
Sbjct: 314 ELRSTRVRIEGLNAHIHDLEQANADLNSRIRELERQLDNDRERHGQEIDLLEKELVRLRE 373
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EMT+QLK+Y++LM+IK++LD+EIA Y L+ EE+ L
Sbjct: 374 EMTQQLKEYQDLMDIKVSLDLEIAAYDKLLVGEEARL 410
>gi|312372208|gb|EFR20221.1| hypothetical protein AND_20465 [Anopheles darlingi]
Length = 509
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 101/142 (71%), Gaps = 8/142 (5%)
Query: 32 SVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLY 91
+V TPSR + KRK +L+E S+ER+ S + VTSSAKG++EI E DP+GKFVKL+
Sbjct: 375 AVRRTPSRAAA----KRKRTVLDE--SDERSVSDYSVTSSAKGDIEIVESDPEGKFVKLH 428
Query: 92 NKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVM 151
NK ++E +G W L+RKV G +T FKFHRT+K++ G VTVWS ++ G HEPP IVM
Sbjct: 429 NKSAKEVQIGGWTLIRKV-GINETVFKFHRTVKVDGGAFVTVWSSDL-GKDHEPPSTIVM 486
Query: 152 KNQKFGSGDEISTILLNTDGEL 173
K QK+ SGD + T LLN DGE+
Sbjct: 487 KGQKWFSGDSMVTQLLNADGEV 508
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 221 RNKELEDQIEYEQSKFA----RMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRN 276
R ++LE Q+ E+ + A ++ E++R++ E++ QL++Y++LM+IKI LD+EIA Y
Sbjct: 287 RLRDLEAQMNLERVRHAEEKSKLMEELERMRKEISLQLQEYQDLMDIKITLDMEIAAYDR 346
Query: 277 LMEAEESSL 285
L+ +EE+ +
Sbjct: 347 LLSSEETRM 355
>gi|17136290|ref|NP_476616.1| lamin, isoform A [Drosophila melanogaster]
gi|386769141|ref|NP_001245892.1| lamin, isoform B [Drosophila melanogaster]
gi|386769143|ref|NP_001245893.1| lamin, isoform C [Drosophila melanogaster]
gi|78099783|sp|P08928.4|LAM0_DROME RecName: Full=Lamin Dm0; Flags: Precursor
gi|7296991|gb|AAF52262.1| lamin, isoform A [Drosophila melanogaster]
gi|25012297|gb|AAN71261.1| LD38055p [Drosophila melanogaster]
gi|383291341|gb|AFH03566.1| lamin, isoform B [Drosophila melanogaster]
gi|383291342|gb|AFH03567.1| lamin, isoform C [Drosophila melanogaster]
Length = 622
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 112/151 (74%), Gaps = 5/151 (3%)
Query: 31 SSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKL 90
+S TPSR + + + KRK +++E SE+ + + + V++SAKGN+EI E+DP+GKFV+L
Sbjct: 430 NSTRATPSRRTPSAAVKRKRAVVDE--SEDHSVADYYVSASAKGNVEIKEIDPEGKFVRL 487
Query: 91 YNKGSEEQSLGNWQLVRKVQGE-VKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNI 149
+NKGSEE ++G WQL R + + T++KFHR+++IE G +TVWS + + A+HEPP ++
Sbjct: 488 FNKGSEEVAIGGWQLQRLINEKGPSTTYKFHRSVRIEPNGVITVWSADTK-ASHEPPSSL 546
Query: 150 VMKNQKFGSGDEISTILLNTDGE-LANQERI 179
VMK+QK+ S D TILLN++GE +AN +RI
Sbjct: 547 VMKSQKWVSADNTRTILLNSEGEAVANLDRI 577
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFAR----MEAEIKRLQT 248
EL+ T+ R + +NEL AN L R ++LE Q++ ++ + + +E E+ RL+
Sbjct: 314 ELRSTRVRIDALNANINELEQANADLNARIRDLERQLDNDRERHGQEIDLLEKELIRLRE 373
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EMT+QLK+Y++LM+IK++LD+EIA Y L+ EE+ L
Sbjct: 374 EMTQQLKEYQDLMDIKVSLDLEIAAYDKLLVGEEARL 410
>gi|441286|emb|CAA30259.1| unnamed protein product [Drosophila melanogaster]
Length = 622
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 112/151 (74%), Gaps = 5/151 (3%)
Query: 31 SSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKL 90
+S TPSR + + + KRK +++E SE+ + + + V++SAKGN+EI E+DP+GKFV+L
Sbjct: 430 NSTRATPSRRTPSAAVKRKRAVVDE--SEDHSVADYYVSASAKGNVEIKEIDPEGKFVRL 487
Query: 91 YNKGSEEQSLGNWQLVRKVQGE-VKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNI 149
+NKGSEE ++G WQL R + + T++KFHR+++IE G +TVWS + + A+HEPP ++
Sbjct: 488 FNKGSEEVAIGGWQLQRLINEKGPSTTYKFHRSVRIEPNGVITVWSADTK-ASHEPPSSL 546
Query: 150 VMKNQKFGSGDEISTILLNTDGE-LANQERI 179
VMK+QK+ S D TILLN++GE +AN +RI
Sbjct: 547 VMKSQKWVSADNTRTILLNSEGEAVANLDRI 577
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFAR----MEAEIKRLQT 248
EL+ T+ R + +NEL AN L R ++LE Q++ ++ + + +E E+ RL+
Sbjct: 314 ELRSTRVRIDALNANINELEQANADLNARIRDLERQLDNDRERHGQEIDLLEKELIRLRE 373
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EMT+QLK+Y++LM+IK++LD+EIA Y L+ EE+ L
Sbjct: 374 EMTQQLKEYQDLMDIKVSLDLEIAAYDKLLVGEEARL 410
>gi|323715518|gb|ADY04829.1| lamin-2xHA tag fusion protein [Gal4/UAS cloning vector pKC26-FB2.0]
Length = 644
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 112/151 (74%), Gaps = 5/151 (3%)
Query: 31 SSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKL 90
+S TPSR + + + KRK +++E SE+ + + + V++SAKGN+EI E+DP+GKFV+L
Sbjct: 430 NSTRATPSRRTPSAAVKRKRAVVDE--SEDHSVADYYVSASAKGNVEIKEIDPEGKFVRL 487
Query: 91 YNKGSEEQSLGNWQLVRKVQGE-VKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNI 149
+NKGSEE ++G WQL R + + T++KFHR+++IE G +TVWS + + A+HEPP ++
Sbjct: 488 FNKGSEEVAIGGWQLQRLINEKGPSTTYKFHRSVRIEPNGVITVWSADTK-ASHEPPSSL 546
Query: 150 VMKNQKFGSGDEISTILLNTDGE-LANQERI 179
VMK+QK+ S D TILLN++GE +AN +RI
Sbjct: 547 VMKSQKWVSADNTRTILLNSEGEAVANLDRI 577
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFAR----MEAEIKRLQT 248
EL+ T+ R + +NEL AN L R ++LE Q++ ++ + + +E E+ RL+
Sbjct: 314 ELRSTRVRIDALNANINELEQANADLNARIRDLERQLDNDRERHGQEIDLLEKELIRLRE 373
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EMT+QLK+Y++LM+IK++LD+EIA Y L+ EE+ L
Sbjct: 374 EMTQQLKEYQDLMDIKVSLDLEIAAYDKLLVGEEARL 410
>gi|8184|emb|CAA34351.1| lamin [Drosophila melanogaster]
Length = 621
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 112/151 (74%), Gaps = 5/151 (3%)
Query: 31 SSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKL 90
+S TPSR + + + KRK +++E SE+ + + + V++SAKGN+EI E+DP+GKFV+L
Sbjct: 429 NSTRATPSRRTPSAAVKRKRAVVDE--SEDHSVADYYVSASAKGNVEIKEIDPEGKFVRL 486
Query: 91 YNKGSEEQSLGNWQLVRKVQGE-VKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNI 149
+NKGSEE ++G WQL R + + T++KFHR+++IE G +TVWS + + A+HEPP ++
Sbjct: 487 FNKGSEEVAIGGWQLQRLINEKGPSTTYKFHRSVRIEPNGVITVWSADTK-ASHEPPSSL 545
Query: 150 VMKNQKFGSGDEISTILLNTDGE-LANQERI 179
VMK+QK+ S D TILLN++GE +AN +RI
Sbjct: 546 VMKSQKWVSADNTRTILLNSEGEAVANLDRI 576
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFAR----MEAEIKRLQT 248
EL+ T+ R + +NEL AN L R ++LE Q++ ++ + + +E E+ RL+
Sbjct: 313 ELRSTRVRIDALNANINELEQANADLNARIRDLERQLDNDRERHGQEIDLLEKELIRLRE 372
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EMT+QLK+Y++LM+IK++LD+EIA Y L+ EE+ L
Sbjct: 373 EMTQQLKEYQDLMDIKVSLDLEIAAYDKLLVGEEARL 409
>gi|322796304|gb|EFZ18875.1| hypothetical protein SINV_08704 [Solenopsis invicta]
Length = 437
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 121/179 (67%), Gaps = 7/179 (3%)
Query: 3 VVFETRIEEVQKKRKTELLCMNVSGAGSSSVAG--TPSRGSVAPSKKRKLNILEEYESEE 60
V + I +K ++E +N++ S+S++G TPSR + KRK +LEE E
Sbjct: 233 VALDLEIAAYRKMLESEEARLNITPMQSTSLSGRATPSRHTPLRGGKRKRTLLEESEER- 291
Query: 61 RTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFH 120
+SS + VT SA+G++EI+E DP G+FVKL NKG++E SLG WQ++RK G ++T FKFH
Sbjct: 292 -SSSDYSVTGSARGDVEISEADPQGRFVKLTNKGNKEISLGGWQIIRKA-GALETVFKFH 349
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDG-ELANQER 178
R++K++AG V VWS ++ GATHEPP NIVMK QK+ GD ++T L N +G E+A ER
Sbjct: 350 RSVKLDAGANVMVWSADI-GATHEPPSNIVMKGQKWFVGDYMTTTLTNIEGEEMATSER 407
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 69/97 (71%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQT 248
EL++T+ R ++ +NEL A+N L R ++LE+ E E+++ A +EAE+ R++
Sbjct: 157 ELRQTRTRIEGLNSRINELEASNNALNARIRDLENLRENERARHAESLAALEAELTRMRD 216
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM +QL++Y++LM+IK+ LD+EIA YR ++E+EE+ L
Sbjct: 217 EMAQQLQEYQDLMDIKVALDLEIAAYRKMLESEEARL 253
>gi|158300735|ref|XP_320593.4| AGAP011938-PA [Anopheles gambiae str. PEST]
gi|157013303|gb|EAA00263.4| AGAP011938-PA [Anopheles gambiae str. PEST]
Length = 595
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 105/148 (70%), Gaps = 9/148 (6%)
Query: 33 VAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYN 92
V TPSR + KRK +LEE S+ER+ S + VTSSAKG++EI EVDP+GK+VKL+N
Sbjct: 418 VRRTPSRAAA----KRKRTVLEE--SDERSVSDYSVTSSAKGDVEIVEVDPEGKYVKLHN 471
Query: 93 KGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMK 152
K +E +G W ++RKV G +T FKFHR+LK++ G VTVWS ++ G HEPP IVMK
Sbjct: 472 KSGKEVQIGGWTVLRKV-GSNETVFKFHRSLKMDGGAFVTVWSSDL-GKDHEPPTTIVMK 529
Query: 153 NQKFGSGDEISTILLNTDG-ELANQERI 179
QK+ +GD ++T LLN +G E+A ER+
Sbjct: 530 GQKWFAGDNMTTHLLNAEGEEVAASERV 557
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
Query: 216 YRLTERNKELEDQIEYEQSKFA----RMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEI 271
+ L R ++LE Q+ +E+ + A +M E++RL+ E++ QL++Y++LM+IKI+LD+EI
Sbjct: 319 FCLQARLRDLEQQMNHERLRHADEKAKMMEEVERLRKEISMQLQEYQDLMDIKISLDMEI 378
Query: 272 AQYRNLMEAEESSL 285
A Y L+ +EE L
Sbjct: 379 AAYDKLLSSEEDRL 392
>gi|194856738|ref|XP_001968816.1| GG25079 [Drosophila erecta]
gi|190660683|gb|EDV57875.1| GG25079 [Drosophila erecta]
Length = 624
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 111/151 (73%), Gaps = 5/151 (3%)
Query: 31 SSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKL 90
SS GTPSR + + + KRK +++E SE+ S + V++SA+GN+EI E+DP+GKFV+L
Sbjct: 432 SSTRGTPSRRTPSGAVKRKRAVVDE--SEDHCVSDYYVSASAQGNVEIKEIDPEGKFVRL 489
Query: 91 YNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNI 149
+NKGS+E ++G WQL R + + T++KFHR++KIE G VTVWS + + A+HEPP ++
Sbjct: 490 FNKGSDEVAIGGWQLQRLINENGPSTTYKFHRSVKIEPNGVVTVWSADTK-ASHEPPSSL 548
Query: 150 VMKNQKFGSGDEISTILLNTDGE-LANQERI 179
VMK+QK+ + D TILLN++GE +A +RI
Sbjct: 549 VMKSQKWVAADNTRTILLNSEGESVATLDRI 579
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQT 248
EL+ T+ R + ++N+L N L R +ELE Q++ ++ + A +E E+ RL+
Sbjct: 316 ELRSTRVRIDGLNAKINDLEQINADLNGRIRELERQLDNDRERHGQEIAVLEKELIRLRE 375
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EMT+QL++Y++LM+IK++LD+EIA Y L+ EE+ L
Sbjct: 376 EMTQQLQEYQDLMDIKVSLDLEIAAYDKLLVGEEARL 412
>gi|289741009|gb|ADD19252.1| nuclear envelope protein lamin [Glossina morsitans morsitans]
Length = 623
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/147 (51%), Positives = 103/147 (70%), Gaps = 6/147 (4%)
Query: 36 TPSRGSVAPSK--KRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNK 93
TP RG+ A S KRK +++E SE+ T+ F VTSSAKG+++I +VDP+GK+VKL NK
Sbjct: 430 TPMRGASAASGALKRKRTVVDE--SEDITTDDFYVTSSAKGDVDIVDVDPEGKYVKLRNK 487
Query: 94 GSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKN 153
G+ E +G WQ+ R G+ ++ FKFHR++KIE T+TVWS + GATHEPP NIVMK
Sbjct: 488 GANEIQIGGWQIKRIADGK-ESVFKFHRSVKIEGAATITVWSSDAVGATHEPPINIVMKT 546
Query: 154 QKFGSGDEISTILLNTDG-ELANQERI 179
QK+ G+ I T L N +G E+A ER+
Sbjct: 547 QKWFGGENIKTSLFNNEGDEVAAVERL 573
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 65/97 (67%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFA----RMEAEIKRLQT 248
EL+ T+ R +T + EL + N RL R KELE ++ +++ + +EAE+KRL+
Sbjct: 305 ELRSTRTRIEGLNTRIEELESTNARLNSRIKELEQLLDNARARHSAERDSLEAELKRLRD 364
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM +QL++Y++LM+IK++LD+EIA Y L+ EES L
Sbjct: 365 EMAQQLQEYQDLMDIKVSLDLEIAAYDKLLCGEESRL 401
>gi|307169872|gb|EFN62381.1| Lamin-C [Camponotus floridanus]
Length = 604
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 117/181 (64%), Gaps = 7/181 (3%)
Query: 1 MGVVFETRIEEVQKKRKTELLCMNVSGAGSSSVAG--TPSRGSVAPSKKRKLNILEEYES 58
+ V + I +K ++E +N++ S++ +G TPSR + KRK +LEE E
Sbjct: 396 IKVALDLEIAAYRKMLESEEARLNITPVQSTNTSGRATPSRHTPLRGGKRKRTLLEESEE 455
Query: 59 EERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFK 118
+SS + VT +A+G++EI E DP G+FVKL NKGS+E SL WQL+RK G ++T FK
Sbjct: 456 R--SSSDYSVTGTARGDVEIAEADPQGRFVKLTNKGSKEISLSGWQLMRKA-GALETVFK 512
Query: 119 FHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDG-ELANQE 177
FHRT K+E G V VWS ++ GATHEPP NIVMK QK+ D ++T L+N +G E+A E
Sbjct: 513 FHRTAKLEGGANVLVWSADI-GATHEPPFNIVMKGQKWFVADNMTTTLINNEGEEMATSE 571
Query: 178 R 178
R
Sbjct: 572 R 572
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 69/97 (71%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFAR----MEAEIKRLQT 248
EL++T+ R ++ ++EL AAN L R ++LE+ E E+++ A +EAE+ R++
Sbjct: 322 ELRQTRSRIEGLNSRISELEAANNALNARIRDLENLRENERARHAESLAGLEAELARMRD 381
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM +QL++Y++LM+IK+ LD+EIA YR ++E+EE+ L
Sbjct: 382 EMAQQLQEYQDLMDIKVALDLEIAAYRKMLESEEARL 418
>gi|357606466|gb|EHJ65077.1| hypothetical protein KGM_17244 [Danaus plexippus]
Length = 511
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 99/149 (66%), Gaps = 6/149 (4%)
Query: 24 NVSGAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDP 83
++S +GS V TP R + RK +L+E SEER+ F VTSSAKG++E+ E P
Sbjct: 323 SMSASGSGRV--TPGRRATPLRAARKRTLLDE--SEERSLQDFSVTSSAKGDLEVAEACP 378
Query: 84 DGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATH 143
+G FVK+ NKG +E SLG +Q++RK G+ +T FKFHRT+K+E G TVWS +V GA H
Sbjct: 379 EGAFVKIRNKGKKELSLGGYQILRKA-GDQETLFKFHRTVKLEPGAVSTVWSADV-GAHH 436
Query: 144 EPPHNIVMKNQKFGSGDEISTILLNTDGE 172
+PP +IVMK QK+ D T LLN DGE
Sbjct: 437 DPPTSIVMKEQKWFVADSFVTSLLNNDGE 465
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQT 248
EL+ + R ++ +N+L N L+ R +ELE Q+E E+++ A +E E+ RL+
Sbjct: 212 ELRTMRTRIDSLNSTLNDLENKNAALSNRCRELERQLESERARHAEDLASLEQELARLRD 271
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYR 275
EM QL++Y LM+IK +LD EIA YR
Sbjct: 272 EMASQLREYATLMDIKCSLDHEIATYR 298
>gi|307195049|gb|EFN77107.1| Lamin Dm0 [Harpegnathos saltator]
Length = 602
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 128/205 (62%), Gaps = 14/205 (6%)
Query: 1 MGVVFETRIEEVQKKRKTELLCMNVSGAGSSSVA-----GTPSRGSVAPSKKRKLNILEE 55
+ V + I +K ++E +N++ S++ + TPSR + KRK +LEE
Sbjct: 391 IKVALDLEIAAYRKLLESEEARLNITPIQSTNTSMSTGRTTPSRHTPLRGGKRKRTLLEE 450
Query: 56 YESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKT 115
E +SS + VT +A+G++EI E DP G+FVKL NKGS+E L WQ++RK G ++T
Sbjct: 451 SEER--SSSDYSVTGTARGDVEIAETDPQGRFVKLTNKGSKEIGLSGWQIIRKA-GALET 507
Query: 116 SFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDG-ELA 174
FKFHRT K++A TVTVWS ++ GA+HEPP N+VMK QK+ D ++TILLN +G E+A
Sbjct: 508 VFKFHRTAKLDANATVTVWSADI-GASHEPPSNVVMKGQKWFVADNMTTILLNNEGEEMA 566
Query: 175 NQERIIDNLRKEQSSLLLELKETKG 199
ER R++ S+ L KE+ G
Sbjct: 567 TSERK----RQQLSTSLSRYKESLG 587
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 70/97 (72%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQT 248
EL++T+ + +T++NEL A L RN++LE+ E E++++ A +E+E+ R++
Sbjct: 317 ELRQTRSKIESLNTKINELEATINALNARNRDLENLRENERARYTEQMAMLESEVARMRE 376
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM +QL++Y++LM+IK+ LD+EIA YR L+E+EE+ L
Sbjct: 377 EMAQQLQEYQDLMDIKVALDLEIAAYRKLLESEEARL 413
>gi|332030883|gb|EGI70519.1| Lamin Dm0 [Acromyrmex echinatior]
Length = 610
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 132/204 (64%), Gaps = 15/204 (7%)
Query: 1 MGVVFETRIEEVQKKRKTELLCMNVSGAGSSSVA---GTPSRGSVAPSK-KRKLNILEEY 56
+ V + I +K +TE +N++ S++ + TPSR + P + KRK +LEE
Sbjct: 394 IKVALDLEIAAYRKLLETEEARLNITPMQSTNTSLSRATPSRHT--PLRGKRKRTLLEES 451
Query: 57 ESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTS 116
E +SS + VT +A+G++EITE DP G+FVKL NKG++E SLG WQ++RK G ++T+
Sbjct: 452 EER--SSSEYSVTGTARGDIEITEADPQGRFVKLTNKGNKEISLGGWQIIRKA-GTLETT 508
Query: 117 FKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDG-ELAN 175
FKFHR++K++ G V VWS ++ GATHEPP NIVMK QK+ D ++T L+N +G E+A
Sbjct: 509 FKFHRSVKLDGGANVMVWSADI-GATHEPPSNIVMKGQKWFVADNMTTTLINIEGEEMAT 567
Query: 176 QERIIDNLRKEQSSLLLELKETKG 199
ER R++ SS L +E+ G
Sbjct: 568 SERK----RQQLSSALSRHRESLG 587
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 70/97 (72%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFA----RMEAEIKRLQT 248
EL++T+ R+ ++ ++EL AAN L+ R +++E+ E E+S++A +EAE+ R++
Sbjct: 320 ELRQTRSRNEGLNSRISELEAANNALSARIRDMENSRENERSRYADSLAALEAELSRMRD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM +QL++Y +LM+IK+ LD+EIA YR L+E EE+ L
Sbjct: 380 EMAQQLQEYHDLMDIKVALDLEIAAYRKLLETEEARL 416
>gi|443704182|gb|ELU01357.1| hypothetical protein CAPTEDRAFT_182411 [Capitella teleta]
Length = 606
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 100/155 (64%), Gaps = 12/155 (7%)
Query: 26 SGAGSSSVAGTPSRGSVAPSKKRKLNILEEYES--------EERTSSGFQVTSSAKGNME 77
SG ++ A TPS GS K+++ +L E + + SSG+ TS+AKG +E
Sbjct: 410 SGTPRTTRADTPSGGS--SRKRKRATLLTSAEGVSGVKQVRQSQASSGYTQTSTAKGVVE 467
Query: 78 ITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFN 137
++E D DG F+KL N ++ SLG WQLV GE +TSFKFHRTL ++ G TVTVWS +
Sbjct: 468 VSETDTDGHFIKLTNTSDKDHSLGGWQLVHTA-GEEETSFKFHRTLNLKPGATVTVWSSD 526
Query: 138 VEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
E A H PPH++VMKNQK+ +GD++++ L+N GE
Sbjct: 527 TETA-HSPPHDVVMKNQKWFTGDDMTSKLMNPQGE 560
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQI----EYEQSKFARMEAEIKRLQT 248
EL+ET+ R + ++ +L++ R ++LE Q+ E+ ++ + ++EI+RL+T
Sbjct: 304 ELRETRKRLDEISSQCTKLQSQAAIFEARIRDLEAQLAREQEHHEAALSGRDSEIRRLRT 363
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++ EQL +YR+L+++KI LD EI YR L+EAEES L
Sbjct: 364 QIEEQLAEYRDLLDVKIQLDNEIQSYRKLLEAEESRL 400
>gi|91084795|ref|XP_972795.1| PREDICTED: similar to lamin [Tribolium castaneum]
gi|270008595|gb|EFA05043.1| hypothetical protein TcasGA2_TC015134 [Tribolium castaneum]
Length = 587
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 112/185 (60%), Gaps = 10/185 (5%)
Query: 1 MGVVFETRIEEVQKKRKTELLCMNVSGAGSS-----SVAGTPSRGSVAPSKKRKLNILEE 55
+ V +T I +K ++E +N+ GS + + R V KRK +LEE
Sbjct: 368 IKVSLDTEIAAYRKLLESEEARLNIKPHGSPEPHQVARGSSQRRTPVRVGAKRKRTMLEE 427
Query: 56 YESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKT 115
S E++ S F V SS+KG +E+ EVDP+GKFVKL+NK +E +LG W + RK G+ +T
Sbjct: 428 --SHEQSLSDFSVNSSSKGEIEVAEVDPEGKFVKLHNKSGQEVALGGWTVTRKA-GDAET 484
Query: 116 SFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDG-ELA 174
+KFHR+LKIE G VT+WS + + HEPP N+VMK QK+ D ++T + N +G E+A
Sbjct: 485 LYKFHRSLKIEPNGYVTIWSAD-QNREHEPPTNLVMKGQKWMVADNMTTTVCNNNGDEVA 543
Query: 175 NQERI 179
ER+
Sbjct: 544 VSERV 548
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 63/99 (63%), Gaps = 4/99 (4%)
Query: 191 LLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRL 246
L EL++ + R +++ EL N L R ++LE +E E+ + A +E ++ RL
Sbjct: 292 LNELRQVRNRIDTLTSKITELENENSSLQNRCRDLEKILENERMRHAEDLAALENDLARL 351
Query: 247 QTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ EM QL++Y++LM+IK++LD EIA YR L+E+EE+ L
Sbjct: 352 REEMANQLQEYQDLMDIKVSLDTEIAAYRKLLESEEARL 390
>gi|321460154|gb|EFX71199.1| lamin-like protein [Daphnia pulex]
Length = 599
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 99/157 (63%), Gaps = 6/157 (3%)
Query: 18 TELLCMNVSGAGSS--SVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGN 75
T L +GA +S + +GTPSR + + KRK +LEE S + + F +SSAKG
Sbjct: 399 TRLKLTPTAGASTSQSTRSGTPSRRTPTRALKRKRTMLEE--SSSYSLADFITSSSAKGE 456
Query: 76 MEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWS 135
+++ EVD +GKF++L NK +E SL WQLV K Q E +T +KFHR+LK+ GGTV+VWS
Sbjct: 457 VQVEEVDSEGKFIRLINKSEKEVSLSGWQLVHKAQ-ETETIYKFHRSLKVAPGGTVSVWS 515
Query: 136 FNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
G HEPP +VMK Q++ +E+ T LL+ GE
Sbjct: 516 AG-SGTAHEPPSTLVMKEQRWFVANEMVTQLLDNSGE 551
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 15/110 (13%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFAR------------ME 240
EL + + R + +++EL AN + +R E+E +E E+ A +
Sbjct: 297 ELIQARNRLKDANLKLSELELANSHMNDRLAEMERNMETERQTHATAMQDASAVYSSMCQ 356
Query: 241 AEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL---PT 287
EI RL+ +M QL++Y++LM+I+ LD+EI+ YR L+E EE+ L PT
Sbjct: 357 GEITRLREQMAIQLQEYQDLMDIRTALDMEISAYRKLLEGEETRLKLTPT 406
>gi|157130102|ref|XP_001655561.1| lamin [Aedes aegypti]
gi|108884444|gb|EAT48669.1| AAEL000335-PA [Aedes aegypti]
Length = 560
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 102/163 (62%), Gaps = 17/163 (10%)
Query: 23 MNVSGAGSSSVAG---TPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEIT 79
+N++ + +S+ + T SR PS KRK +++ S + VTSSAKG++EI+
Sbjct: 356 LNITPSVTSTTSAGLSTSSRLFRTPSYKRKRTAMDD-------SVDYSVTSSAKGDLEIS 408
Query: 80 EVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVE 139
E DPDGKF+K++NK ++ Q L Q+VRK + + ++KF + K+E TVT+WS
Sbjct: 409 ECDPDGKFIKVHNKSNQTQKLDGCQIVRKTES-TEVTYKFPKGAKLEGSSTVTIWSA--- 464
Query: 140 GATH--EPPHNIVMKNQKFGSGDEISTILLNTDG-ELANQERI 179
A H +PP N+VMK Q + SGD +ST LL+ DG E+A+ ERI
Sbjct: 465 SANHKADPPSNLVMKGQSWASGDNVSTRLLDQDGEEVAHAERI 507
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 34/41 (82%)
Query: 245 RLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
RL+ EMT QLK+Y++LM+IKI+LD+EIA Y L+ +EE+ L
Sbjct: 316 RLRDEMTVQLKEYQDLMDIKISLDMEIAAYDRLLSSEETRL 356
>gi|299120639|gb|ADJ12122.1| lamin [Drosophila miranda]
gi|299120641|gb|ADJ12123.1| lamin [Drosophila miranda]
gi|299120643|gb|ADJ12124.1| lamin [Drosophila miranda]
gi|299120645|gb|ADJ12125.1| lamin [Drosophila miranda]
gi|299120647|gb|ADJ12126.1| lamin [Drosophila miranda]
gi|299120649|gb|ADJ12127.1| lamin [Drosophila miranda]
gi|299120651|gb|ADJ12128.1| lamin [Drosophila miranda]
gi|299120653|gb|ADJ12129.1| lamin [Drosophila miranda]
gi|299120655|gb|ADJ12130.1| lamin [Drosophila miranda]
gi|299120657|gb|ADJ12131.1| lamin [Drosophila miranda]
gi|299120659|gb|ADJ12132.1| lamin [Drosophila miranda]
gi|299120661|gb|ADJ12133.1| lamin [Drosophila miranda]
gi|299120663|gb|ADJ12134.1| lamin [Drosophila miranda]
gi|299120665|gb|ADJ12135.1| lamin [Drosophila miranda]
Length = 140
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 83/108 (76%), Gaps = 3/108 (2%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVT 132
GN+EI E+DP+GKFVK++NKG+EE ++G WQL R V + ++KFHR++KI+A VT
Sbjct: 1 GNIEIKEIDPEGKFVKIFNKGNEEVAIGGWQLQRIVNESGPSNTYKFHRSVKIDANAFVT 60
Query: 133 VWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERI 179
VWS + + A+HEPP NIVMK QK+ +GD TILLNTDGE +AN +RI
Sbjct: 61 VWSVDSK-ASHEPPTNIVMKQQKWITGDNTKTILLNTDGETVANLDRI 107
>gi|299120671|gb|ADJ12138.1| lamin [Drosophila pseudoobscura]
gi|299120673|gb|ADJ12139.1| lamin [Drosophila pseudoobscura]
gi|299120677|gb|ADJ12141.1| lamin [Drosophila pseudoobscura]
gi|299120679|gb|ADJ12142.1| lamin [Drosophila pseudoobscura]
gi|299120683|gb|ADJ12144.1| lamin [Drosophila pseudoobscura]
gi|299120685|gb|ADJ12145.1| lamin [Drosophila pseudoobscura]
gi|299120687|gb|ADJ12146.1| lamin [Drosophila pseudoobscura]
gi|299120689|gb|ADJ12147.1| lamin [Drosophila pseudoobscura]
gi|299120691|gb|ADJ12148.1| lamin [Drosophila pseudoobscura]
gi|299120693|gb|ADJ12149.1| lamin [Drosophila pseudoobscura]
gi|299120695|gb|ADJ12150.1| lamin [Drosophila pseudoobscura]
gi|299120697|gb|ADJ12151.1| lamin [Drosophila pseudoobscura]
Length = 140
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 82/108 (75%), Gaps = 3/108 (2%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVT 132
GN+EI E+DP+GKFVK++NKG+EE ++G WQL R V + ++KFHR++KI+A VT
Sbjct: 1 GNIEIKEIDPEGKFVKIFNKGNEEVAIGGWQLQRIVNENGPSNTYKFHRSVKIDANAYVT 60
Query: 133 VWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERI 179
VWS + + ATHEPP NIVMK QK+ +GD TILLN DGE +AN +RI
Sbjct: 61 VWSVDSK-ATHEPPTNIVMKQQKWITGDNTKTILLNIDGETVANLDRI 107
>gi|299120635|gb|ADJ12120.1| lamin [Drosophila miranda]
gi|299120637|gb|ADJ12121.1| lamin [Drosophila miranda]
Length = 140
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 83/108 (76%), Gaps = 3/108 (2%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVT 132
GN+EI E+DP+GKFVK++NKG+EE ++G WQL R V + ++KFHR++KI+A VT
Sbjct: 1 GNIEIKEIDPEGKFVKIFNKGNEEVAIGGWQLQRIVNESGPSNTYKFHRSVKIDAKSFVT 60
Query: 133 VWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERI 179
VWS + + A+HEPP NIVMK QK+ +GD TILLNTDGE +AN +RI
Sbjct: 61 VWSVDSK-ASHEPPTNIVMKQQKWITGDNTKTILLNTDGETVANLDRI 107
>gi|299120681|gb|ADJ12143.1| lamin [Drosophila pseudoobscura]
Length = 140
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 82/108 (75%), Gaps = 3/108 (2%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVT 132
GN+EI E+DP+GKFVK++NKG+EE ++G WQL R V + ++KFHR++KI+A VT
Sbjct: 1 GNIEIKEIDPEGKFVKIFNKGNEEVAIGGWQLQRIVNENGPSNTYKFHRSVKIDANAYVT 60
Query: 133 VWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERI 179
VWS + + A+HEPP NIVMK QK+ +GD TILLN DGE +AN +RI
Sbjct: 61 VWSVDSK-ASHEPPTNIVMKQQKWVTGDNTKTILLNIDGETVANLDRI 107
>gi|299120667|gb|ADJ12136.1| lamin [Drosophila pseudoobscura]
gi|299120669|gb|ADJ12137.1| lamin [Drosophila pseudoobscura]
gi|299120675|gb|ADJ12140.1| lamin [Drosophila pseudoobscura]
Length = 140
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 82/108 (75%), Gaps = 3/108 (2%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVT 132
GN+EI E+DP+GKFVK++NKG+EE ++G WQL R V + ++KFHR++KI+A VT
Sbjct: 1 GNIEIKEIDPEGKFVKIFNKGNEEVAIGGWQLQRIVNENGPSNTYKFHRSVKIDANAYVT 60
Query: 133 VWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERI 179
VWS + + A+HEPP NIVMK QK+ +GD TILLN DGE +AN +RI
Sbjct: 61 VWSVDSK-ASHEPPTNIVMKQQKWITGDNTKTILLNIDGETVANLDRI 107
>gi|195123283|ref|XP_002006137.1| GI18724 [Drosophila mojavensis]
gi|193911205|gb|EDW10072.1| GI18724 [Drosophila mojavensis]
Length = 622
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 108/166 (65%), Gaps = 13/166 (7%)
Query: 25 VSGAGSSSVAGTPS-RGSVAP------SKKRKLNILEEYESEERTSSGFQVTSSAKGNME 77
+ GS S TPS R S P + KR+ +++E SE+RT S + V ++AKG++E
Sbjct: 425 TASGGSRSGRMTPSGRRSATPGISGSSAVKRRRTVIDE--SEDRTLSEYSVNAAAKGDLE 482
Query: 78 ITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFN 137
I E D +G+F+KL+NKG+EE +L WQL R + G+ + +FKF R K+ G +VT+WS +
Sbjct: 483 IIEADTEGRFIKLHNKGTEEINLTGWQLTR-IAGDEELAFKFSRGSKVSGGASVTIWSAD 541
Query: 138 VEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERIIDN 182
GA+H+PP+N++MK +K+ + + +IL N D E +A+ +RI +N
Sbjct: 542 T-GASHDPPNNLLMK-KKWPVANSMRSILTNADKEDVASYDRIREN 585
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 58/85 (68%), Gaps = 4/85 (4%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQTEMTEQLKDYREL 260
+ ++ EL N L R +ELE+Q++ E+ + A +EA+++R++ EM +QL++Y++L
Sbjct: 319 NNKLQELENTNASLNARIRELENQLDSERQRHNQYIAALEADLQRMRDEMAQQLQEYKDL 378
Query: 261 MEIKINLDVEIAQYRNLMEAEESSL 285
M+IK++LD+E+A Y L+ EE L
Sbjct: 379 MDIKVSLDLELAAYDKLLCGEERRL 403
>gi|299120633|gb|ADJ12119.1| lamin [Drosophila affinis]
Length = 140
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 82/108 (75%), Gaps = 3/108 (2%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVT 132
GN+EI E+DP+GKFVKL+NKG+EE ++G WQL R V + T +KF+R++KI+A VT
Sbjct: 1 GNVEIKEIDPEGKFVKLFNKGNEEVAIGGWQLQRMVIESGSSTIYKFNRSVKIDANAFVT 60
Query: 133 VWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERI 179
VWS + + ATHEPP NIVMK QK+ +GD TIL+N DGE +AN +RI
Sbjct: 61 VWSADTK-ATHEPPTNIVMKTQKWIAGDNTKTILVNGDGETVANLDRI 107
>gi|195381973|ref|XP_002049707.1| GJ21743 [Drosophila virilis]
gi|194144504|gb|EDW60900.1| GJ21743 [Drosophila virilis]
Length = 622
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 109/168 (64%), Gaps = 14/168 (8%)
Query: 23 MNVSGAGSSSVAGTPS-RGSVAP------SKKRKLNILEEYESEERTSSGFQVTSSAKGN 75
++ SG GS S TPS R S P + KR+ +++E SE+RT S + V ++AKG+
Sbjct: 424 LSASG-GSRSGRVTPSGRRSATPGISGSSAVKRRRTVIDE--SEDRTLSEYSVNAAAKGD 480
Query: 76 MEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWS 135
+EI E D +G+F+KL+NKG+EE +L WQL R + G+ + +FKF R K+ G +VT+WS
Sbjct: 481 LEIIEADTEGRFIKLHNKGTEEINLTGWQLTR-IAGDEELAFKFSRGSKVLGGASVTIWS 539
Query: 136 FNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERIIDN 182
+ GA H+PP+N+VMK +K+ + + ++L N D E +A+ +R+ N
Sbjct: 540 VDA-GAAHDPPNNLVMK-KKWPVANSMRSVLANADKEDVASYDRVRAN 585
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 57/84 (67%), Gaps = 4/84 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQTEMTEQLKDYRELM 261
+++ EL N L R +ELE+ ++ E+ + A +EA+++R++ EM +QL++Y++LM
Sbjct: 320 SKLQELENTNAGLNARIRELENLLDTERQRHNQYIASLEADLQRMRDEMAQQLQEYQDLM 379
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+IK++LD+E+A Y L+ EE L
Sbjct: 380 DIKVSLDLELAAYDKLLCGEERRL 403
>gi|4886531|emb|CAB43347.1| lamin [Priapulus caudatus]
Length = 568
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 84/127 (66%), Gaps = 9/127 (7%)
Query: 46 KKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQL 105
K++++ EEYE + T S+KG + + E DPDGKFVKL N ++ +G WQL
Sbjct: 414 KRKRMAGAEEYE--------YSTTDSSKGEVRVMECDPDGKFVKLSNTSDKDIHIGTWQL 465
Query: 106 VRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTI 165
R + G+ + ++KFHR + ++AG + VWS +V+ TH PP ++VMKNQK+ SG+ + TI
Sbjct: 466 KR-ITGDKEITYKFHRNIILKAGQHINVWSSDVKDVTHNPPSDLVMKNQKWYSGESMKTI 524
Query: 166 LLNTDGE 172
L++++GE
Sbjct: 525 LIDSEGE 531
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 61/106 (57%), Gaps = 10/106 (9%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
I +R E SL K ++ +++E L A R+ + L+ + E + + ++
Sbjct: 298 IKEMRSEYDSL-------KAQAESFESERAALEA---RMRGLERALDREREEHRDQMSQR 347
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ EIK L ++ + L++Y++LM+IKI LD+EIA YR ++E EE+ L
Sbjct: 348 DDEIKNLYAQIAQNLQEYQDLMDIKIALDMEIAAYRKMLEGEEARL 393
>gi|195025063|ref|XP_001985993.1| GH21120 [Drosophila grimshawi]
gi|193901993|gb|EDW00860.1| GH21120 [Drosophila grimshawi]
Length = 623
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 106/168 (63%), Gaps = 14/168 (8%)
Query: 23 MNVSGAGSSSVAGTPS-RGSVAP------SKKRKLNILEEYESEERTSSGFQVTSSAKGN 75
++ SG GS S TPS R S P + KR+ +++E SE+RT S + V ++AKG
Sbjct: 425 LSASG-GSRSGRVTPSGRRSATPGISGSGAVKRRRTVIDE--SEDRTLSEYSVNAAAKGE 481
Query: 76 MEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWS 135
+EI E D +G+F+KL+NKG+EE +L WQL R + G+ + +FKF R K+ G T T+WS
Sbjct: 482 LEIIEADTEGRFIKLHNKGTEEINLTGWQLTR-IAGDEELAFKFSRGSKVLGGATATIWS 540
Query: 136 FNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERIIDN 182
+ G H+PP N+VMK +K+ + + ++L N D E +A+ +R+ DN
Sbjct: 541 VDA-GTAHDPPTNLVMK-KKWPVANSMRSVLTNADKEDVASYDRVRDN 586
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 208 MNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQTEMTEQLKDYRELMEI 263
+ EL N L R +ELE+ ++ E+ + A +EA+++R++ EM +QL++Y++LM+I
Sbjct: 322 VQELENTNAVLNARIRELENLLDAERQRHNQYIASLEADLQRMRDEMAQQLQEYQDLMDI 381
Query: 264 KINLDVEIAQYRNLMEAEESSL 285
K++LD+E+A Y L+ EE L
Sbjct: 382 KVSLDLELAAYDKLLCGEERRL 403
>gi|157808|gb|AAA28666.1| lamin C like protein [Drosophila melanogaster]
Length = 621
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 108/166 (65%), Gaps = 15/166 (9%)
Query: 28 AGSSSVAG--TPS-RGSVAP------SKKRKLNILEEYESEERTSSGFQVTSSAKGNMEI 78
A +SS +G TPS R S P + KR+ +++E SE+RT S + V ++AKG++EI
Sbjct: 425 ASASSRSGRVTPSGRRSATPGISGSSAVKRRRTVIDE--SEDRTLSEYSVNAAAKGDLEI 482
Query: 79 TEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNV 138
E D +G+F+KL+NKG+EE +L WQL R + G+ + +FKF R KI G +VT+WS +
Sbjct: 483 IEADVEGRFIKLHNKGTEEINLTGWQLTR-IAGDEELAFKFSRGSKILGGASVTIWSVDA 541
Query: 139 EGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERIIDNL 183
G H+PP+N+VMK +K+ + + ++L N D E +A+ +R+ N+
Sbjct: 542 -GTAHDPPNNLVMK-KKWPVANSMRSVLANADKEDVASYDRVRANV 585
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQTEMTEQLKDYREL 260
+ ++ L N L R +ELE+ ++ E+ + A +EAE++R++ EM QL++Y+ L
Sbjct: 318 NAKLQNLEDTNAGLNARIRELENLLDTERQRHNQYIASLEAELQRIRDEMAHQLQEYQGL 377
Query: 261 MEIKINLDVEIAQYRNLMEAEESSL 285
M+IK++LD+EIA Y L+ EE L
Sbjct: 378 MDIKVSLDLEIAAYDKLLCGEERRL 402
>gi|195431451|ref|XP_002063755.1| GK15736 [Drosophila willistoni]
gi|194159840|gb|EDW74741.1| GK15736 [Drosophila willistoni]
Length = 619
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 108/167 (64%), Gaps = 13/167 (7%)
Query: 24 NVSGAGSSSVAGTPS-RGSVAP------SKKRKLNILEEYESEERTSSGFQVTSSAKGNM 76
++S +G+ S TPS R S P + KR+ +++E SE+RT+S + V ++AKG++
Sbjct: 421 HLSSSGTRSGRVTPSGRRSATPGISGSGAVKRRRTVIDE--SEDRTTSEYSVNAAAKGDL 478
Query: 77 EITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSF 136
EI E D +G+F+KL+NKG+EE +L WQL R + G+ + +FKF R K+ G +V +WS
Sbjct: 479 EIIEADVEGRFIKLHNKGTEEINLTGWQLTR-IAGDEELAFKFSRGSKVLGGASVAIWSV 537
Query: 137 NVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERIIDN 182
+ G H+PP+N+VMK +K+ + + ++L N D E +A+ +R+ N
Sbjct: 538 DA-GVAHDPPNNLVMK-KKWPVANSMRSVLANADKEDVASYDRVRAN 582
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 60/90 (66%), Gaps = 7/90 (7%)
Query: 203 KYDT---EMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQTEMTEQLK 255
K DT ++ +L N +L R +ELE+ ++ E+ + A +EAE++R++ EM +QL+
Sbjct: 313 KIDTLNGKLQDLENTNAQLNARIRELENTLDTERQRHNQYIASLEAELQRMRDEMAQQLQ 372
Query: 256 DYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+YR+LM+IK++LD+EIA Y L+ EE L
Sbjct: 373 EYRDLMDIKVSLDLEIAAYDKLLCGEEHRL 402
>gi|195486008|ref|XP_002091326.1| LamC [Drosophila yakuba]
gi|194177427|gb|EDW91038.1| LamC [Drosophila yakuba]
Length = 621
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 108/166 (65%), Gaps = 15/166 (9%)
Query: 28 AGSSSVAG--TPS-RGSVAP------SKKRKLNILEEYESEERTSSGFQVTSSAKGNMEI 78
A +SS +G TPS R S P + KR+ +++E SE+RT S + V ++AKG++EI
Sbjct: 425 ASASSRSGRVTPSGRRSATPGISGSSAVKRRRTVIDE--SEDRTLSEYSVNAAAKGDLEI 482
Query: 79 TEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNV 138
E D +G+F+KL+NKG+EE +L WQL R + G+ + +FKF R K+ G +VT+WS +
Sbjct: 483 IEADVEGRFIKLHNKGTEEINLTGWQLTR-IAGDEELAFKFSRGSKVLGGASVTIWSVDA 541
Query: 139 EGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERIIDNL 183
G H+PP+N+VMK +K+ + + ++L N D E +A+ +R+ N+
Sbjct: 542 -GTAHDPPNNLVMK-KKWPVANSMRSVLANADKEDVASYDRVRANV 585
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQTEMTEQLKDYREL 260
+ ++ +L N L R +ELE+ ++ E+ + A +EAE++R++ EM QL++Y++L
Sbjct: 318 NAKLQDLENTNAGLNARIRELENLLDTERQRHNQYIASLEAELQRMRDEMAHQLQEYQDL 377
Query: 261 MEIKINLDVEIAQYRNLMEAEESSL 285
M+IK++LD+EIA Y L+ EE L
Sbjct: 378 MDIKVSLDLEIAAYDKLLCGEERRL 402
>gi|195334380|ref|XP_002033861.1| GM20205 [Drosophila sechellia]
gi|194125831|gb|EDW47874.1| GM20205 [Drosophila sechellia]
Length = 621
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 108/166 (65%), Gaps = 15/166 (9%)
Query: 28 AGSSSVAG--TPS-RGSVAP------SKKRKLNILEEYESEERTSSGFQVTSSAKGNMEI 78
A +SS +G TPS R S P + KR+ +++E SE+RT S + V ++AKG++EI
Sbjct: 425 ASASSRSGRVTPSGRRSATPGISGSSAVKRRRTVIDE--SEDRTLSEYSVNAAAKGDLEI 482
Query: 79 TEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNV 138
E D +G+F+KL+NKG+EE +L WQL R + G+ + +FKF R K+ G +VT+WS +
Sbjct: 483 IEADVEGRFIKLHNKGTEEINLTGWQLTR-IAGDEELAFKFSRGSKVLGGASVTIWSVDA 541
Query: 139 EGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERIIDNL 183
G H+PP+N+VMK +K+ + + ++L N D E +A+ +R+ N+
Sbjct: 542 -GTAHDPPNNLVMK-KKWPVANSMRSVLANADKEDVASYDRVRANV 585
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQTEMTEQLKDYREL 260
+ ++ L N L R +ELE+ ++ E+ + A +EAE++R++ EM QL++Y++L
Sbjct: 318 NAKLQNLEDTNAGLNSRIRELENLLDTERQRHNQYIASLEAELQRMRDEMAHQLQEYQDL 377
Query: 261 MEIKINLDVEIAQYRNLMEAEESSL 285
M+IK++LD+EIA Y L+ EE L
Sbjct: 378 MDIKVSLDLEIAAYDKLLCGEERRL 402
>gi|195583410|ref|XP_002081515.1| GD25675 [Drosophila simulans]
gi|194193524|gb|EDX07100.1| GD25675 [Drosophila simulans]
Length = 621
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 108/166 (65%), Gaps = 15/166 (9%)
Query: 28 AGSSSVAG--TPS-RGSVAP------SKKRKLNILEEYESEERTSSGFQVTSSAKGNMEI 78
A +SS +G TPS R S P + KR+ +++E SE+RT S + V ++AKG++EI
Sbjct: 425 ASASSRSGRVTPSGRRSATPGISGSSAVKRRRTVIDE--SEDRTLSEYSVNAAAKGDLEI 482
Query: 79 TEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNV 138
E D +G+F+KL+NKG+EE +L WQL R + G+ + +FKF R K+ G +VT+WS +
Sbjct: 483 IEADVEGRFIKLHNKGTEEINLTGWQLTR-IAGDEELAFKFSRGSKVLGGASVTIWSVDA 541
Query: 139 EGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERIIDNL 183
G H+PP+N+VMK +K+ + + ++L N D E +A+ +R+ N+
Sbjct: 542 -GTAHDPPNNLVMK-KKWPVANSMRSVLANADKEDVASYDRVRANV 585
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQTEMTEQLKDYREL 260
+ ++ L N L R +ELE+ ++ E+ + A +EAE++R++ EM QL++Y++L
Sbjct: 318 NAKLQSLEDTNAGLNTRIRELENLLDTERQRHNQYIASLEAELQRMRDEMAHQLQEYQDL 377
Query: 261 MEIKINLDVEIAQYRNLMEAEESSL 285
M+IK++LD+EIA Y L+ EE L
Sbjct: 378 MDIKVSLDLEIAAYDKLLCGEERRL 402
>gi|170035295|ref|XP_001845506.1| lamin Dm0 [Culex quinquefasciatus]
gi|167877156|gb|EDS40539.1| lamin Dm0 [Culex quinquefasciatus]
Length = 567
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 96/157 (61%), Gaps = 11/157 (7%)
Query: 25 VSGAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPD 84
S ++SV + SR PS KRK N+L+E S + +TS+AKG++E++E DP+
Sbjct: 363 TSTTATASVLSSTSRLFRTPSLKRKRNVLDE-------SLDYSITSTAKGDLELSECDPE 415
Query: 85 GKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHE 144
GKFVK++NK ++ L WQ+ RK + + +FKF + KIE GTV++WS G +
Sbjct: 416 GKFVKVHNKSKQQYKLDGWQIQRKTESS-EVTFKFPKNSKIEGNGTVSIWSSAC-GQKPD 473
Query: 145 PPHNIVM-KNQKFGSGDEISTILLNTD-GELANQERI 179
PP +VM K Q + +GD T+L+N D GE A+ ER+
Sbjct: 474 PPITLVMTKGQTWTTGDSTVTVLVNADGGEEAHSERM 510
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Query: 227 DQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
D+I+YE + ++E EI RL+ EM+ QLK+Y++LM+IKI+LD+EIA Y L+ +EE+ L
Sbjct: 299 DRIQYEDER-QKLENEITRLRDEMSIQLKEYQDLMDIKISLDMEIAAYDKLLSSEETRL 356
>gi|194883054|ref|XP_001975619.1| GG22418 [Drosophila erecta]
gi|190658806|gb|EDV56019.1| GG22418 [Drosophila erecta]
Length = 614
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 108/166 (65%), Gaps = 15/166 (9%)
Query: 28 AGSSSVAG--TPS-RGSVAP------SKKRKLNILEEYESEERTSSGFQVTSSAKGNMEI 78
A +SS +G TPS R S P + KR+ +++E SE+RT S + V ++AKG++EI
Sbjct: 418 ASASSRSGRVTPSGRRSATPGISGSSAVKRRRTVIDE--SEDRTLSEYSVNAAAKGDLEI 475
Query: 79 TEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNV 138
E D +G+F+KL+NKG+EE +L WQL R + G+ + +FKF R K+ G +VT+WS +
Sbjct: 476 IEADVEGRFIKLHNKGTEEINLTGWQLTR-IAGDEELAFKFSRGSKVLGGASVTIWSVDA 534
Query: 139 EGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERIIDNL 183
G H+PP+N+VMK +K+ + + ++L N D E +A+ +R+ N+
Sbjct: 535 -GTAHDPPNNLVMK-KKWPVANSMRSVLANADKEDVASYDRVRANV 578
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQTEMTEQLKDYREL 260
+ ++ +L N L R +ELE+ ++ E+ + A +EAE++R++ EM QL++Y++L
Sbjct: 311 NAKLQDLENTNAGLNARIRELENLLDTERQRHNQYIASLEAELQRMRDEMAHQLQEYQDL 370
Query: 261 MEIKINLDVEIAQYRNLMEAEESSL 285
M+IK++LD+EIA Y L+ EE L
Sbjct: 371 MDIKVSLDLEIAAYDKLLCGEERRL 395
>gi|24653664|ref|NP_523742.2| lamin C, isoform A [Drosophila melanogaster]
gi|73920222|sp|Q03427.2|LAMC_DROME RecName: Full=Lamin-C; AltName: Full=pG-IF
gi|7303173|gb|AAF58237.1| lamin C, isoform A [Drosophila melanogaster]
gi|20152029|gb|AAM11374.1| LD31805p [Drosophila melanogaster]
gi|220945992|gb|ACL85539.1| LamC-PA [synthetic construct]
gi|220955724|gb|ACL90405.1| LamC-PA [synthetic construct]
Length = 621
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 108/166 (65%), Gaps = 15/166 (9%)
Query: 28 AGSSSVAG--TPS-RGSVAP------SKKRKLNILEEYESEERTSSGFQVTSSAKGNMEI 78
A +SS +G TPS R S P + KR+ +++E SE+RT S + V ++AKG++EI
Sbjct: 425 ASASSRSGRVTPSGRRSATPGISGSSAVKRRRTVIDE--SEDRTLSEYSVNAAAKGDLEI 482
Query: 79 TEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNV 138
E D +G+F+KL+NKG+EE +L WQL R + G+ + +FKF R K+ G +VT+WS +
Sbjct: 483 IEADVEGRFIKLHNKGTEEINLTGWQLTR-IAGDEELAFKFSRGSKVLGGASVTIWSVDA 541
Query: 139 EGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERIIDNL 183
G H+PP+N+VMK +K+ + + ++L N D E +A+ +R+ N+
Sbjct: 542 -GTAHDPPNNLVMK-KKWPVANSMRSVLANADKEDVASYDRVRANV 585
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQTEMTEQLKDYREL 260
+ ++ L N L R +ELE+ ++ E+ + A +EAE++R++ EM QL++Y+ L
Sbjct: 318 NAKLQNLEDTNAGLNARIRELENLLDTERQRHNQYIASLEAELQRMRDEMAHQLQEYQGL 377
Query: 261 MEIKINLDVEIAQYRNLMEAEESSL 285
M+IK++LD+EIA Y L+ EE L
Sbjct: 378 MDIKVSLDLEIAAYDKLLCGEERRL 402
>gi|531500|emb|CAA53480.1| nuclear lamin C protein [Drosophila melanogaster]
Length = 621
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 106/175 (60%), Gaps = 21/175 (12%)
Query: 25 VSGAGSSSVAGTPSR-GSVAPSK--------------KRKLNILEEYESEERTSSGFQVT 69
+S GS A SR G V PS KR+ +++E SE+RT S + V
Sbjct: 416 ISSNGSHLTASASSRSGRVTPSGHHSATPGISGSSAVKRRRTVIDE--SEDRTLSEYSVN 473
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
++AKG++EI E D +G+F+KL+NKG+EE +L WQL R + G+ + +FKF R K+ G
Sbjct: 474 AAAKGDLEIIEADVEGRFIKLHNKGTEEINLTGWQLTR-IAGDEELAFKFSRGSKVLGGA 532
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERIIDNL 183
+VT+WS + G H+PP+N+VMK +K+ + + ++L N D E +A+ +R+ N+
Sbjct: 533 SVTIWSVDA-GTAHDPPNNLVMK-KKWPVANSMRSVLANADKEDVASYDRVRANV 585
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQTEMTEQLKDYREL 260
+ ++ L N L R +ELE+ ++ E+ + A +EAE++R++ EM QL++Y+ L
Sbjct: 318 NAKLQNLEDTNAGLNARIRELENLLDTERQRHNQYIASLEAELQRMRDEMAHQLQEYQGL 377
Query: 261 MEIKINLDVEIAQYRNLMEAEESSL 285
M+IK++LD+EIA Y L+ EE L
Sbjct: 378 MDIKVSLDLEIAAYDKLLCGEERRL 402
>gi|125808013|ref|XP_001360601.1| GA10086 [Drosophila pseudoobscura pseudoobscura]
gi|54635773|gb|EAL25176.1| GA10086 [Drosophila pseudoobscura pseudoobscura]
Length = 622
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 108/168 (64%), Gaps = 14/168 (8%)
Query: 23 MNVSGAGSSSVAGTPS-RGSVAP------SKKRKLNILEEYESEERTSSGFQVTSSAKGN 75
++ SG GS S TPS R S P + KR+ +++E SE+RT S + V ++AKG+
Sbjct: 424 LSASG-GSRSGRVTPSGRRSATPGISGSTAVKRRRTVIDE--SEDRTLSEYSVNAAAKGD 480
Query: 76 MEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWS 135
+EI E D +G+F+KL+NKG+EE +L WQL R + G+ + +FKF R K+ G +VT+WS
Sbjct: 481 LEIIEADVEGRFIKLHNKGTEEINLTGWQLTR-IAGDEELAFKFSRGSKVLGGASVTIWS 539
Query: 136 FNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERIIDN 182
+ G H+PP+N+VMK +K+ + + ++L N D E +A+ +R+ N
Sbjct: 540 VDA-GTAHDPPNNLVMK-KKWPVANSMRSVLANADKEDVASYDRVRAN 585
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
Query: 208 MNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQTEMTEQLKDYRELMEI 263
+ +L N L R +ELE+ ++ E+ + A +EAE++R++ EM QL++Y++LM+I
Sbjct: 321 LQDLETTNAGLNARIRELENLLDTERQRHNQYIASLEAELQRMRDEMAHQLQEYQDLMDI 380
Query: 264 KINLDVEIAQYRNLMEAEESSL 285
K++LD+EIA Y L+ EE L
Sbjct: 381 KVSLDLEIAAYDKLLCGEERRL 402
>gi|442623692|ref|NP_001260974.1| lamin C, isoform B [Drosophila melanogaster]
gi|440214389|gb|AGB93506.1| lamin C, isoform B [Drosophila melanogaster]
Length = 640
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 101/155 (65%), Gaps = 14/155 (9%)
Query: 28 AGSSSVAG--TPS-RGSVAP------SKKRKLNILEEYESEERTSSGFQVTSSAKGNMEI 78
A +SS +G TPS R S P + KR+ +++E SE+RT S + V ++AKG++EI
Sbjct: 425 ASASSRSGRVTPSGRRSATPGISGSSAVKRRRTVIDE--SEDRTLSEYSVNAAAKGDLEI 482
Query: 79 TEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNV 138
E D +G+F+KL+NKG+EE +L WQL R + G+ + +FKF R K+ G +VT+WS +
Sbjct: 483 IEADVEGRFIKLHNKGTEEINLTGWQLTR-IAGDEELAFKFSRGSKVLGGASVTIWSVDA 541
Query: 139 EGATHEPPHNIVMKNQKFGSGDEISTILLNTDGEL 173
G H+PP+N+VMK +K+ + + ++L N D E+
Sbjct: 542 -GTAHDPPNNLVMK-KKWPVANSMRSVLANADKEV 574
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQTEMTEQLKDYREL 260
+ ++ L N L R +ELE+ ++ E+ + A +EAE++R++ EM QL++Y+ L
Sbjct: 318 NAKLQNLEDTNAGLNARIRELENLLDTERQRHNQYIASLEAELQRMRDEMAHQLQEYQGL 377
Query: 261 MEIKINLDVEIAQYRNLMEAEESSL 285
M+IK++LD+EIA Y L+ EE L
Sbjct: 378 MDIKVSLDLEIAAYDKLLCGEERRL 402
>gi|194755882|ref|XP_001960208.1| GF11640 [Drosophila ananassae]
gi|190621506|gb|EDV37030.1| GF11640 [Drosophila ananassae]
Length = 623
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 106/165 (64%), Gaps = 15/165 (9%)
Query: 28 AGSSSVAG--TPS-RGSVAP------SKKRKLNILEEYESEERTSSGFQVTSSAKGNMEI 78
A +SS +G TPS R S P + KR+ +++E SE+RT S + V ++AKG++EI
Sbjct: 427 ASTSSRSGRVTPSGRRSATPGISGSSAVKRRRTVIDE--SEDRTLSEYSVNAAAKGDLEI 484
Query: 79 TEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNV 138
E D +G+F+KL+NKG+EE +L WQL R + G+ + +FKF R K+ G +VT+WS +
Sbjct: 485 IEADVEGRFIKLHNKGTEEINLTGWQLTR-IAGDEELAFKFSRGSKVLGGASVTIWSVDA 543
Query: 139 EGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERIIDN 182
G H+PP N+VMK +K+ + + ++L N D E +A+ +R+ N
Sbjct: 544 -GTAHDPPTNLVMK-KKWPVANSMRSVLANADKEDVASYDRVRAN 586
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQTEMTEQLKDYREL 260
+ ++ +L N L R +ELE+ ++ E+ + A +EAE++R++ EM QL++Y++L
Sbjct: 318 NAKLQDLENTNAGLNARIRELENLLDTERQRHNQYIASLEAELQRMRDEMAHQLQEYQDL 377
Query: 261 MEIKINLDVEIAQYRNLMEAEESSL 285
M+IK++LD+EIA Y L+ EE L
Sbjct: 378 MDIKVSLDLEIAAYDKLLCGEERRL 402
>gi|242004520|ref|XP_002423131.1| Lamin-C, putative [Pediculus humanus corporis]
gi|212506077|gb|EEB10393.1| Lamin-C, putative [Pediculus humanus corporis]
Length = 623
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 91/143 (63%), Gaps = 12/143 (8%)
Query: 35 GTPSRG---SVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDP-DGKFVKL 90
GTP R P+K+R++ + E E++ FQV+ AKG++EI++VD +GKF++L
Sbjct: 448 GTPIRRIPIGKGPTKRRRVFVDESQEAD-----SFQVSGEAKGDIEISDVDHREGKFIQL 502
Query: 91 YNKGSEEQSLGNWQLVRKVQGE-VKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNI 149
+NK +E SL W + E +T+FKFHR++KI+ G VTVWS + G H PP +I
Sbjct: 503 HNKSDKELSLSGWSIKHSAGTEDSETTFKFHRSVKIDGKGNVTVWSMD-SGRAHNPPEHI 561
Query: 150 VMKNQKFGSGDEISTILLNTDGE 172
VMK QK+ GD + TIL+N +GE
Sbjct: 562 VMK-QKWFMGDSVITILVNNEGE 583
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQT 248
EL+ + + + ++ EL +AN L R KELE ++ E+++ A ME E+ + +
Sbjct: 309 ELRSMQAKYHSLNRQVGELESANAALNIRIKELEKLLDAERTRGLEQLALMEQELMKARQ 368
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM +QLKDY ELM+IK+ LD EI+ YR L+E EES L
Sbjct: 369 EMADQLKDYHELMDIKVALDSEISAYRKLLEFEESRL 405
>gi|158297175|ref|XP_317447.4| AGAP008015-PA [Anopheles gambiae str. PEST]
gi|157015068|gb|EAA12429.5| AGAP008015-PA [Anopheles gambiae str. PEST]
Length = 571
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 100/182 (54%), Gaps = 15/182 (8%)
Query: 26 SGAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDG 85
+ G S + SR PS KRK N L+E S + V +SAKG++E+TE DP+G
Sbjct: 373 TSTGGGSAFTSSSRLFRTPSLKRKRNNLDE-------SIDYSVVTSAKGDIEVTECDPEG 425
Query: 86 KFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEP 145
+FV++ NK +E +L WQL+R+ + S++F ++ KIE G VTVW+ V +P
Sbjct: 426 RFVRIANKSKQEYALAGWQLIRRPVDGAEVSYRFPKSAKIEGNGMVTVWA-TVANRKPDP 484
Query: 146 PHNIVMKNQKFGSGDEISTILLNTDGE---LANQERIIDNLRKEQSSLLLELKETKGRSG 202
P ++VMK + D +ST+L+N +GE L + R++ K +E+ GR G
Sbjct: 485 PTDLVMKGALWTVTDAMSTVLVNEEGEEMALVERHRMM----KPPKDKYFHHEESGGRLG 540
Query: 203 KY 204
Y
Sbjct: 541 VY 542
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 50/69 (72%), Gaps = 4/69 (5%)
Query: 221 RNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRN 276
R + LE+++ E++++ A++E ++ ++ EM QLKDY++LM+IKI+LD+EIA Y
Sbjct: 296 RIRALEERLVLERTRYDEEKAKLEQQLDGMRNEMAVQLKDYQDLMDIKISLDMEIAAYDK 355
Query: 277 LMEAEESSL 285
L+ +EE+ L
Sbjct: 356 LLSSEETRL 364
>gi|427785553|gb|JAA58228.1| Putative lamin [Rhipicephalus pulchellus]
Length = 606
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 93/143 (65%), Gaps = 10/143 (6%)
Query: 36 TPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGS 95
TP RG+ KRK + EE+++S QVT+SAKG++EI++ DG++V ++NKG+
Sbjct: 431 TPHRGT-----KRKRTFMSH--REEQSNSDAQVTASAKGDLEISDHCIDGRYVTIHNKGT 483
Query: 96 EEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK 155
+E L WQ+ K G + +FKFHRT I+ G T+T+WS + G TH PP ++VM+ K
Sbjct: 484 KEVPLAGWQVHSKA-GNDEFTFKFHRTHAIKPGATITIWSPDC-GVTHNPPSDLVMRTTK 541
Query: 156 FGSGDEISTILLNTDG-ELANQE 177
+ G++ T LL+++G E+A +E
Sbjct: 542 WPKGEQKRTALLSSEGQEVATRE 564
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 179 IIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFAR 238
++D + S EL K R ++ + EL + N L+ R ++LE +E E+ R
Sbjct: 305 LLDRRSSDSSVTRDELHTYKTRLDGVNSRIAELESLNQSLSSRVRDLERLLEQERDWNTR 364
Query: 239 M----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E EI RL+ EM +QL++Y++L++IK+ LD+EIA YR L+E EE+ L
Sbjct: 365 ALSAKEEEIHRLRAEMEQQLREYQDLLDIKVALDLEIAAYRKLLEGEETRL 415
>gi|427785555|gb|JAA58229.1| Putative lamin [Rhipicephalus pulchellus]
Length = 606
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 93/143 (65%), Gaps = 10/143 (6%)
Query: 36 TPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGS 95
TP RG+ KRK + EE+++S QVT+SAKG++EI++ DG++V ++NKG+
Sbjct: 431 TPHRGT-----KRKRTFMSH--REEQSNSDAQVTASAKGDLEISDHCIDGRYVTIHNKGT 483
Query: 96 EEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK 155
+E L WQ+ K G + +FKFHRT I+ G T+T+WS + G TH PP ++VM+ K
Sbjct: 484 KEVPLAGWQVHSKA-GNDEFTFKFHRTHAIKPGATITIWSPDC-GVTHNPPSDLVMRTTK 541
Query: 156 FGSGDEISTILLNTDG-ELANQE 177
+ G++ T LL+++G E+A +E
Sbjct: 542 WPKGEQKRTALLSSEGQEVATRE 564
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 179 IIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFAR 238
++D + S EL K R ++ + EL + N L+ R ++LE +E E+ R
Sbjct: 305 LLDRRSSDSSVTRDELHTYKTRLDGVNSRIAELESLNQSLSSRVRDLERLLEQERDWNTR 364
Query: 239 M----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ EI RL+ EM +QL++Y++L++IK+ LD+EIA YR L+E EE+ L
Sbjct: 365 ALSAKDEEIHRLRAEMEQQLREYQDLLDIKVALDLEIAAYRKLLEGEETRL 415
>gi|410927468|ref|XP_003977167.1| PREDICTED: lamin-A-like [Takifugu rubripes]
Length = 629
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 95/168 (56%), Gaps = 12/168 (7%)
Query: 46 KKRKLNILEEYESEERTSSGFQVT-------SSAKGNMEITEVDPDGKFVKLYNKGSEEQ 98
KKR+ N + +SE + G VT +SA G + + E+D DGKFV+L NK E+Q
Sbjct: 425 KKRRHN---DNDSETSSMVGATVTKTRISQHASASGRITVDEIDLDGKFVRLSNKADEDQ 481
Query: 99 SLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFG 157
LGNWQ+ R+V ++KF ++AGGTVTVW+ + ATH PP ++V KNQ +G
Sbjct: 482 CLGNWQVKRQVGNGSPITYKFPHKFTLKAGGTVTVWAASA-NATHNPPTDLVWKNQNSWG 540
Query: 158 SGDEISTILLNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYD 205
+GD++ T L NT GE ++ +L ++ + T G +Y+
Sbjct: 541 TGDDLQTTLYNTSGEEMAMRKVTRSLFHDEDDDDMGAHSTSGADNEYN 588
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%)
Query: 199 GRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYR 258
G SG+ +L+A+ ++ E + L + + + + E EI + + +QL +Y+
Sbjct: 294 GMSGQLSILQKQLKASEAKVCELEETLSRERDLMRRRLEGKEKEIAETRLRIQQQLDEYQ 353
Query: 259 ELMEIKINLDVEIAQYRNLMEAEESSL 285
+L++IK+ LD+EI YR L+E EE L
Sbjct: 354 DLLDIKLALDMEINAYRKLLEGEEERL 380
>gi|348519580|ref|XP_003447308.1| PREDICTED: lamin-A-like [Oreochromis niloticus]
Length = 643
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 95/160 (59%), Gaps = 18/160 (11%)
Query: 27 GAGS-SSVAGTPSR-----GSVAPSKKRKLNILEEYESEERTSSGFQVT-------SSAK 73
AGS SS +G SR +P+K+R+ N + +SE + +G V+ +SA
Sbjct: 392 AAGSRSSTSGALSRSIHLSAQNSPAKRRRPN---DTDSEASSFAGGAVSRTRITQQASAS 448
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD DGK+V+L NK E+Q+LGNWQ+ R+V +FKF ++AG VT+
Sbjct: 449 GRVTVDEVDLDGKYVRLSNKADEDQNLGNWQVKRQVGSGTPIAFKFPAKFTLKAGQRVTI 508
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G TH PP ++V KNQ +G+GD T L++T+GE
Sbjct: 509 WASN-SGGTHNPPSDLVWKNQPSWGTGDLFQTTLISTNGE 547
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL++ + R T++++L+ + ++LED + E+ R+ + E+ ++
Sbjct: 285 ELQQIRVRLESTSTQLSQLQKQLAAREAKIRDLEDALSRERDSTRRLLGEKDREMAEMRQ 344
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 345 QMQQQLDEYQELLDVKLALDMEICAYRKLLEGEEQRL 381
>gi|170593321|ref|XP_001901413.1| Intermediate filament tail domain containing protein [Brugia
malayi]
gi|158591480|gb|EDP30093.1| Intermediate filament tail domain containing protein [Brugia
malayi]
Length = 607
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 96/168 (57%), Gaps = 15/168 (8%)
Query: 23 MNVSGAGSS-SVAGTPSRGSV-----------APSKKRKLNILEEYESEERTSSGFQVTS 70
+N+S S S A +PS GS P K+++ N ++ T+ ++ TS
Sbjct: 417 LNISQQSSGGSPAASPSAGSRFSLSYTDSGHRRPIKRKRFNASDDSLYYRNTAKSYKTTS 476
Query: 71 SAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGT 130
++ ++EI E D DGKF+KL NKG E S+G W ++ + + +T +KFH ++ G T
Sbjct: 477 NSDCDIEIEEHDTDGKFIKLVNKGEETISIGQW-AIKSIANDKETVYKFHSRQTMKPGDT 535
Query: 131 VTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDG-ELANQE 177
+TVWS + G H PP +VMKNQ++ +GD + T L++ DG E+A +E
Sbjct: 536 ITVWSAD-SGEKHTPPSQLVMKNQQWPAGDRVKTSLVDADGNEMATRE 582
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 22/122 (18%)
Query: 174 ANQERIIDNLRKEQSSLL-LELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
AN+ R NL KE+++ L L + E + G Y++ + L NK++ D +E
Sbjct: 308 ANEARQQMNLAKEEAARLRLRIHEMEKVGGGYESRIEGL----------NKKIAD-LE-S 355
Query: 233 QSKFARMEAEIK---------RLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES 283
Q +F R + +++ LQ E+ L +Y++L ++K+ LD E+ Y+NL+E EES
Sbjct: 356 QLRFVRDDCDVRINQRDKRVAELQEEIDRLLNEYQDLFDLKVQLDTELKAYQNLLEGEES 415
Query: 284 SL 285
L
Sbjct: 416 RL 417
>gi|402593850|gb|EJW87777.1| intermediate filament tail domain-containing protein, partial
[Wuchereria bancrofti]
Length = 525
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 96/168 (57%), Gaps = 15/168 (8%)
Query: 23 MNVSGAGSS-SVAGTPSRGSV-----------APSKKRKLNILEEYESEERTSSGFQVTS 70
+N+S S S A +PS G+ P K+++ N ++ T+ ++ TS
Sbjct: 335 LNISQQSSGGSPAASPSAGNRFSLSYTDSGHRRPIKRKRFNASDDSLYYRNTAKSYKTTS 394
Query: 71 SAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGT 130
++ ++EI E D DGKF+KL NKG E S+G W ++ + + +T +KFH ++ G T
Sbjct: 395 NSDCDIEIEEHDTDGKFIKLVNKGEETISIGQW-AIKSIANDKETVYKFHSRQTMKPGDT 453
Query: 131 VTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDG-ELANQE 177
+TVWS + G H PP +VMKNQ++ +GD + T L++ DG E+A +E
Sbjct: 454 ITVWSAD-SGEKHTPPSQLVMKNQQWPAGDRVKTSLVDADGNEMATRE 500
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 12/117 (10%)
Query: 174 ANQERIIDNLRKEQSSLL-LELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
AN+ R NL KE+++ L L + E + G Y++ + L N ++ + LE Q+ +
Sbjct: 226 ANEARQQMNLAKEEAARLRLRVHEMEKVEGGYESRIEGL---NKKIAD----LESQLRFV 278
Query: 233 QS----KFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ + + + + LQ E+ L +Y++L ++K+ LD E+ Y+NL+E EES L
Sbjct: 279 RDDCDVRINQRDKRVAELQEEIDRLLNEYQDLFDLKVQLDTELKAYQNLLEGEESRL 335
>gi|328706857|ref|XP_001943032.2| PREDICTED: lamin Dm0-like [Acyrthosiphon pisum]
Length = 583
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 97/158 (61%), Gaps = 17/158 (10%)
Query: 25 VSGAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQ--VTSSAKGNMEITEVD 82
+S ++SV G+P RG KKRKL +E E E F +T+S+ ++EI EV
Sbjct: 400 LSITPNTSVVGSP-RG-----KKRKLFQRDETEYE------FSNIITASSTSDIEICEVC 447
Query: 83 PDGKFVKLYNKGSEEQSLGNWQLVR-KVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGA 141
PDG+FVKLYNKGS+E +L ++LVR + V T +KFHR++K+ AG +TVWS
Sbjct: 448 PDGQFVKLYNKGSKEFALSGYELVRTTAEQNVSTVYKFHRSVKLGAGNWLTVWSSTASNQ 507
Query: 142 THEPPH-NIVMKNQKFGSGDEISTILLNTDG-ELANQE 177
HEP +IVM Q + GD ++TILLN +G E+A E
Sbjct: 508 IHEPSAGSIVMNIQAWVVGDLMATILLNPEGLEVATHE 545
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 56/83 (67%), Gaps = 4/83 (4%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYEQSKFAR----MEAEIKRLQTEMTEQLKDYRELME 262
++N+L ++N + ++E E +++K+ ++ ++ +Q +M++++++Y++LM+
Sbjct: 318 QINDLLSSNNDYLRKITDIERSRELQRTKYISEIQGLDQQLTAMQDDMSQKVQEYQDLMD 377
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
IK+ LD+EI+ YR L+E+EE L
Sbjct: 378 IKVALDMEISAYRKLLESEERRL 400
>gi|350646247|emb|CCD59081.1| lamin, putative [Schistosoma mansoni]
Length = 6522
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Query: 58 SEERTSSGFQVTSSAKGNMEI-TEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTS 116
S RT ++V+S+A+G +E E D GK++K++N ++E +LG+W+LV + G +T
Sbjct: 445 SSSRTRFAYRVSSTARGPVEFFKEQDTHGKWIKIHNSSNDEMNLGSWELVHEADGH-ETR 503
Query: 117 FKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
FKF R ++ G T+WS + EG +H PP ++ MKN+ F G E++ +LL+TDGE
Sbjct: 504 FKFSRAFSLKPGAICTIWSQDAEGNSHNPPADLTMKNKSFHPGTEVTILLLDTDGE 559
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%)
Query: 185 KEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIK 244
+++S LL+ K S ++ EL R+ + ++L D+ + +S+ E+
Sbjct: 306 RQRSELLIARKRADELSHDLSKKIAELELLQRRVADLERQLADERKDFESQLLFQRQEVN 365
Query: 245 RLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
RL+ E+ E +++ +LM KI LD EI YR ++E EES L
Sbjct: 366 RLKEELEESFREFTDLMNTKIALDQEILMYRKMLEGEESRL 406
>gi|47211800|emb|CAF92488.1| unnamed protein product [Tetraodon nigroviridis]
Length = 611
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 89/151 (58%), Gaps = 14/151 (9%)
Query: 30 SSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVT-------SSAKGNMEITEVD 82
S+S +G S SKKR+LN + + E + G VT +SA G + + E+D
Sbjct: 398 SASASGRSHNSS--GSKKRRLN---DNDRETSCTVGATVTKTRISQHASASGPITVDEID 452
Query: 83 PDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGAT 142
DGKFV+L NK E QSLGNWQ+ R+V ++KF ++AGGTVTVW+ + AT
Sbjct: 453 LDGKFVRLRNKDVENQSLGNWQVKRQVGNGSTITYKFPHKFALKAGGTVTVWAASA-NAT 511
Query: 143 HEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
H PP ++V KNQ +G+GD + T L++ GE
Sbjct: 512 HNPPTDLVWKNQNSWGTGDLLQTTLISATGE 542
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 193 ELKETKGR----SGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQT 248
EL+ T+ R SG+ +L A+ ++ E + L + + + + E EI +
Sbjct: 285 ELEHTRVRLESMSGQLSMLQKQLSASEAKVHELEETLLRERDMMRRRLEGKEKEIAETRF 344
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ +QL +Y++L++IK+ LD+EI+ YR L+E EE L
Sbjct: 345 RIQQQLDEYQDLLDIKVALDMEISAYRKLLEGEEERL 381
>gi|256083882|ref|XP_002578164.1| lamin [Schistosoma mansoni]
Length = 1885
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Query: 58 SEERTSSGFQVTSSAKGNMEI-TEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTS 116
S RT ++V+S+A+G +E E D GK++K++N ++E +LG+W+LV + G +T
Sbjct: 445 SSSRTRFAYRVSSTARGPVEFFKEQDTHGKWIKIHNSSNDEMNLGSWELVHEADGH-ETR 503
Query: 117 FKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
FKF R ++ G T+WS + EG +H PP ++ MKN+ F G E++ +LL+TDGE
Sbjct: 504 FKFSRAFSLKPGAICTIWSQDAEGNSHNPPADLTMKNKSFHPGTEVTILLLDTDGE 559
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%)
Query: 185 KEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIK 244
+++S LL+ K S ++ EL R+ + ++L D+ + +S+ E+
Sbjct: 306 RQRSELLIARKRADELSHDLSKKIAELELLQRRVADLERQLADERKDFESQLLFQRQEVN 365
Query: 245 RLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
RL+ E+ E +++ +LM KI LD EI YR ++E EES L
Sbjct: 366 RLKEELEESFREFTDLMNTKIALDQEILMYRKMLEGEESRL 406
>gi|256083880|ref|XP_002578163.1| lamin [Schistosoma mansoni]
Length = 2086
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Query: 58 SEERTSSGFQVTSSAKGNMEI-TEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTS 116
S RT ++V+S+A+G +E E D GK++K++N ++E +LG+W+LV + G +T
Sbjct: 445 SSSRTRFAYRVSSTARGPVEFFKEQDTHGKWIKIHNSSNDEMNLGSWELVHEADGH-ETR 503
Query: 117 FKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
FKF R ++ G T+WS + EG +H PP ++ MKN+ F G E++ +LL+TDGE
Sbjct: 504 FKFSRAFSLKPGAICTIWSQDAEGNSHNPPADLTMKNKSFHPGTEVTILLLDTDGE 559
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%)
Query: 185 KEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIK 244
+++S LL+ K S ++ EL R+ + ++L D+ + +S+ E+
Sbjct: 306 RQRSELLIARKRADELSHDLSKKIAELELLQRRVADLERQLADERKDFESQLLFQRQEVN 365
Query: 245 RLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
RL+ E+ E +++ +LM KI LD EI YR ++E EES L
Sbjct: 366 RLKEELEESFREFTDLMNTKIALDQEILMYRKMLEGEESRL 406
>gi|76154123|gb|AAX25629.2| SJCHGC06202 protein [Schistosoma japonicum]
Length = 337
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 74/109 (67%), Gaps = 2/109 (1%)
Query: 65 GFQVTSSAKGNMEI-TEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTL 123
++V+S+A+G +E E D GK++K+YN +EE +LG+W+LV + G +T FKF RT
Sbjct: 195 AYRVSSTARGPVEFFKEQDIHGKWIKIYNSSTEEVNLGSWELVHEADGH-ETRFKFSRTF 253
Query: 124 KIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
++ G T T+WS + EG +H PP +I MKN+ F G E++ +LL+ DGE
Sbjct: 254 SLKPGTTCTIWSQDAEGNSHNPPSDITMKNKSFHPGTEVTILLLDADGE 302
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%)
Query: 185 KEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIK 244
+++S LL+ K S ++ EL R+T+ +L D+ +++ E++
Sbjct: 48 RQRSELLMARKRADDLSHDLSKKIAELELLQRRVTDLEGQLSDERRDFEAQLLFQRQEVE 107
Query: 245 RLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
RL+ E+ E +++ +LM KI LD EI YR ++E EES L
Sbjct: 108 RLKEELEESFREFTDLMNTKIALDQEILMYRKMLEGEESRL 148
>gi|156119433|ref|NP_001095210.1| lamin-A [Xenopus laevis]
gi|125963|sp|P11048.1|LMNA_XENLA RecName: Full=Lamin-A; Flags: Precursor
gi|64878|emb|CAA29652.1| unnamed protein product [Xenopus laevis]
gi|255254|gb|AAB23219.1| lamin A, XlA [Xenopus laevis, Peptide, 665 aa]
Length = 665
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 83/133 (62%), Gaps = 8/133 (6%)
Query: 41 SVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSL 100
S + SK+R+L EE ES SS F + G + + EVDP+GK+V+L NK +E+QSL
Sbjct: 408 SSSASKRRRL---EEGESR---SSSFTQHARTTGKVSVEEVDPEGKYVRLRNKSNEDQSL 461
Query: 101 GNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSG 159
GNWQ+ R++ E +KF L ++AG TVT+W+ GAT+ PP ++V K Q +G+G
Sbjct: 462 GNWQIKRQIGDETPIVYKFPPRLTLKAGQTVTIWASGA-GATNSPPSDLVWKAQSSWGTG 520
Query: 160 DEISTILLNTDGE 172
D I T LL + E
Sbjct: 521 DSIRTALLTSSNE 533
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 223 KELEDQIEYEQSKFARMEA----EIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED E+ R+ A E+ ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 317 RDLEDAYARERDSSRRLLADKDREMAEMRARMQQQLDEYQELLDIKLALDMEINAYRKLL 376
Query: 279 EAEESSL 285
E EE L
Sbjct: 377 EGEEERL 383
>gi|312086497|ref|XP_003145099.1| intermediate filament tail domain-containing protein [Loa loa]
gi|307759738|gb|EFO18972.1| intermediate filament tail domain-containing protein [Loa loa]
Length = 598
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 91/151 (60%), Gaps = 6/151 (3%)
Query: 30 SSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVK 89
S S A + R S+ K+++ N ++ T+ ++ TS++ ++EI E D DGKF+K
Sbjct: 430 SLSYADSGHRRSI---KRKRFNASDDSLYYRNTAKSYKTTSNSDCDIEIEEHDTDGKFIK 486
Query: 90 LYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNI 149
L NKG E S+G W ++ + + +T +KFH ++ G T+TVWS + G H PP +
Sbjct: 487 LMNKGEETISIGQW-AIKSIANDKETVYKFHSRQTMKPGDTITVWSAD-SGEKHTPPSQL 544
Query: 150 VMKNQKFGSGDEISTILLNTDG-ELANQERI 179
VMKNQ++ +GD + T L++ DG E+A +E I
Sbjct: 545 VMKNQQWPAGDRVKTSLVDADGNEMATRESI 575
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 12/117 (10%)
Query: 174 ANQERIIDNLRKEQSSLL-LELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
AN+ R NL KE+++ L L + E + Y++ + L N ++ + LE Q+ +
Sbjct: 299 ANEARQQMNLAKEEAARLRLRIHEMEKVGSGYESRIEGL---NKKIAD----LESQLRFV 351
Query: 233 QS----KFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ + ++ + I LQ E+ L +Y++L ++K+ LD E+ Y+NL+E EES L
Sbjct: 352 RDDCDVRISQRDKRIVELQGEIDRLLNEYQDLFDLKVQLDTELKAYQNLLEGEESRL 408
>gi|312372727|gb|EFR20623.1| hypothetical protein AND_19779 [Anopheles darlingi]
Length = 575
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 11/151 (7%)
Query: 23 MNVSGAGSSSVAGTPSRGSVAPSK-KRKLNILEEYESEERTSSGFQVTSSAKGNMEITEV 81
+N++ + +S+ + SR PS KRK N L+E S + + +SAKG++E++E
Sbjct: 371 LNITPSVTSTTSA--SRLFRTPSSLKRKRNALDE-------SLDYSIVTSAKGDLEVSEC 421
Query: 82 DPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGA 141
DP+G+FV++ NK +E L WQLVR+ + FKF + KIE G VTVW V
Sbjct: 422 DPEGRFVRIQNKSKQEYPLAGWQLVRRPHDAPEVRFKFGKGSKIEGNGMVTVWG-TVANR 480
Query: 142 THEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
+PP ++VMK+ + D + T LLN +GE
Sbjct: 481 KSDPPIDLVMKSSLWTVTDTMVTTLLNAEGE 511
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 37/48 (77%)
Query: 238 RMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M EI R++ +M QLKDY++LM+IKI+LD+EIA Y L+ +EES L
Sbjct: 324 KMAQEIDRMRNDMAVQLKDYQDLMDIKISLDLEIAAYDKLLSSEESRL 371
>gi|240977914|ref|XP_002402839.1| lamin, putative [Ixodes scapularis]
gi|215491235|gb|EEC00876.1| lamin, putative [Ixodes scapularis]
Length = 579
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 77/114 (67%), Gaps = 11/114 (9%)
Query: 59 EERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFK 118
EE+++S QV++SAKG++EI++ PDGK+ E L W++ RK G + +F+
Sbjct: 427 EEQSNSDVQVSASAKGDLEISDHCPDGKY---------EIPLAGWRIDRK-SGNDEFTFR 476
Query: 119 FHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
FHRT I+ G T+TVWS + GATH PP ++VM+NQ++ G+++ T LL+ DGE
Sbjct: 477 FHRTHVIQPGTTITVWSSDA-GATHSPPSDLVMRNQQWPHGEQMRTALLSADGE 529
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 67/104 (64%), Gaps = 4/104 (3%)
Query: 186 EQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EA 241
+ S+ + E++ K R +++++EL + N LT R ++LE ++ E+ R E
Sbjct: 291 DSSTKMEEMRAYKSRLEGLNSKISELESQNLSLTARVRDLERLLDQEREWHGRALMAKEE 350
Query: 242 EIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EI RL+ E+ +QL++Y++L++IK+ LD+EIA YR L+E EES L
Sbjct: 351 EISRLREEIEDQLREYQDLLDIKVALDLEIAAYRKLLEGEESRL 394
>gi|348527612|ref|XP_003451313.1| PREDICTED: lamin-A-like [Oreochromis niloticus]
Length = 645
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 85/136 (62%), Gaps = 12/136 (8%)
Query: 45 SKKRKLNILEEYESEERTSSGFQVT-------SSAKGNMEITEVDPDGKFVKLYNKGSEE 97
SKKR+LN + +SE + +G VT +SA G + + EVD +GK+++L NK E+
Sbjct: 427 SKKRRLN---DNDSETSSVTGNTVTKTRISQQASASGRITVDEVDMEGKYIRLSNKADED 483
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KF 156
QSL NWQ+ R+V +KF ++AGGTVT+W+ + G TH PP ++V K+Q +
Sbjct: 484 QSLANWQVKRQVGNSTPIVYKFPHKFTLKAGGTVTIWAASG-GGTHNPPTDLVWKSQNSW 542
Query: 157 GSGDEISTILLNTDGE 172
G+GD + T L++ +GE
Sbjct: 543 GTGDLLQTSLISANGE 558
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL++T+ R ++++L+ + +ELE+ + E+ R + +I ++
Sbjct: 284 ELQQTRIRMESLSGQLSQLQKQLSASEAKARELEEALSRERDLMRRRLEDKDRDITEIRA 343
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 344 RMQQQLDEYQELLDIKLALDMEINAYRKLLEGEEERL 380
>gi|431892313|gb|ELK02753.1| Lamin-A/C [Pteropus alecto]
Length = 748
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 84/147 (57%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T S GS +KKRKL E + S F + G + + EVD DGK
Sbjct: 400 GRASSHSSQTQSGGSA--TKKRKLEAAE-------SRSSFSQHARTSGRVAVEEVDEDGK 450
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK SE+Q++GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 451 FVRLRNKSSEDQTMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 509
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 510 TDLVWKAQNTWGCGNSLRTALINSTGE 536
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>gi|390476838|ref|XP_003735190.1| PREDICTED: prelamin-A/C isoform 2 [Callithrix jacchus]
Length = 614
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 9/145 (6%)
Query: 29 GSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFV 88
G +S + ++GS + +KKRKL ES E SS F + G + + EVD DGKFV
Sbjct: 400 GRASSHSSQTQGSGSVTKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEDGKFV 452
Query: 89 KLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHN 148
+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP +
Sbjct: 453 RLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPTD 511
Query: 149 IVMKNQK-FGSGDEISTILLNTDGE 172
+V K Q +G G+ + T L+N+ GE
Sbjct: 512 LVWKAQNTWGCGNSLRTALINSTGE 536
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|296229150|ref|XP_002760137.1| PREDICTED: prelamin-A/C isoform 1 [Callithrix jacchus]
Length = 664
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 9/145 (6%)
Query: 29 GSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFV 88
G +S + ++GS + +KKRKL ES E SS F + G + + EVD DGKFV
Sbjct: 400 GRASSHSSQTQGSGSVTKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEDGKFV 452
Query: 89 KLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHN 148
+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP +
Sbjct: 453 RLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPTD 511
Query: 149 IVMKNQK-FGSGDEISTILLNTDGE 172
+V K Q +G G+ + T L+N+ GE
Sbjct: 512 LVWKAQNTWGCGNSLRTALINSTGE 536
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|113931400|ref|NP_001039148.1| lamin A/C [Xenopus (Silurana) tropicalis]
gi|89272508|emb|CAJ83897.1| lamin A/C [Xenopus (Silurana) tropicalis]
Length = 668
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 83/133 (62%), Gaps = 8/133 (6%)
Query: 41 SVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSL 100
S + SK+R+L E+ E S+ + + G + + EVDP+GK+V+L NK +E+QSL
Sbjct: 408 SSSASKRRRL------EAGESGSTSYTQHARTTGKVSVEEVDPEGKYVRLRNKSNEDQSL 461
Query: 101 GNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSG 159
GNWQ+ R++ E ++F L ++AG TVT+W+ GAT+ PP ++V K Q +G+G
Sbjct: 462 GNWQIKRQIGEETPIVYRFPPRLTLKAGQTVTIWASGA-GATNNPPTDLVWKAQSSWGTG 520
Query: 160 DEISTILLNTDGE 172
D I T LL ++ E
Sbjct: 521 DSIRTALLTSNNE 533
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 223 KELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED E+ R+ + E+ ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 317 RDLEDAYARERDSNRRLMSDKDREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 376
Query: 279 EAEESSL 285
E EE L
Sbjct: 377 EGEEERL 383
>gi|195150448|ref|XP_002016166.1| GL10641 [Drosophila persimilis]
gi|194110013|gb|EDW32056.1| GL10641 [Drosophila persimilis]
Length = 616
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 101/169 (59%), Gaps = 22/169 (13%)
Query: 23 MNVSGAGSSSVAGTPS-RGSVAPS-------KKRKLNILEEYESEERTSSGFQVTSSAKG 74
++ SG GS S TPS R S P K+R+ I ESE+RT S + G
Sbjct: 424 LSASG-GSRSGRVTPSGRRSATPGISGSTAVKRRRTGI---DESEDRTLSEY------SG 473
Query: 75 NMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVW 134
++EI E D +G+F+KL+NKG+EE +L WQL R + G+ + +FKF R K+ G +VT+W
Sbjct: 474 DLEIIEADVEGRFIKLHNKGTEEINLTGWQLTR-IAGDEELAFKFSRGSKVLGGASVTIW 532
Query: 135 SFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE-LANQERIIDN 182
S + G H+PP+N+VMK +K+ + + ++L N D E +A+ +R+ N
Sbjct: 533 SVDA-GTAHDPPNNLVMK-KKWPVANSMRSVLANADKEDVASYDRVRAN 579
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
Query: 208 MNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQTEMTEQLKDYRELMEI 263
+ +L N L R +ELE+ ++ E+ + A +EAE++R++ EM QL++Y++LM+I
Sbjct: 321 LQDLETTNAGLNARIRELENLLDTERQRHNQYIASLEAELQRMRDEMAHQLQEYQDLMDI 380
Query: 264 KINLDVEIAQYRNLMEAEESSL 285
K++LD+EIA Y L+ EE L
Sbjct: 381 KVSLDLEIAAYDKLLCGEERRL 402
>gi|432882966|ref|XP_004074167.1| PREDICTED: lamin-A-like [Oryzias latipes]
Length = 640
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 89/156 (57%), Gaps = 12/156 (7%)
Query: 25 VSGAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVT-------SSAKGNME 77
V+G+ SS S +P+K+R+ N E +SE + G + +SA G +
Sbjct: 393 VTGSRSSVGRSVHSSAQSSPAKRRRPN---EADSEASSYGGGALARTRITQQASASGRVT 449
Query: 78 ITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFN 137
+ EVD DGK+V+L NK E+Q+LG+WQ+ R+V FKF ++AG VT+W+ N
Sbjct: 450 VDEVDLDGKYVRLSNKADEDQNLGSWQVRRQVGSGTPILFKFPAKFTLKAGQRVTIWASN 509
Query: 138 VEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
G +H PP ++V K+Q +G+GD+ T L++ GE
Sbjct: 510 A-GGSHNPPSDLVWKSQPSWGTGDQFQTTLISASGE 544
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 223 KELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ E E+ ++ M +QL +Y+EL+++K+ LD+EI YR L+
Sbjct: 316 RDLEDALTRERDSTRRLLADKEREMADMRQRMQQQLDEYQELLDVKLALDMEICAYRKLL 375
Query: 279 EAEESSL 285
E EE L
Sbjct: 376 EGEEERL 382
>gi|449511711|ref|XP_004175831.1| PREDICTED: LOW QUALITY PROTEIN: lamin-A-like [Taeniopygia guttata]
Length = 539
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 81/129 (62%), Gaps = 9/129 (6%)
Query: 45 SKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQ 104
SKKRKL +SE RTS F + G + + EVD +GKFV+L NK +E+Q++GNWQ
Sbjct: 295 SKKRKLE-----DSESRTS--FSHHARTSGRVGVEEVDLEGKFVRLRNKSNEDQAMGNWQ 347
Query: 105 LVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEIS 163
+ R+ + +++F ++AG VT+W+ GATH PP N+V K Q +GSGD +
Sbjct: 348 IKRQNGDDPPLTYRFPPKYTLKAGQVVTIWASGA-GATHSPPSNLVWKTQSSWGSGDSLR 406
Query: 164 TILLNTDGE 172
T L+N++GE
Sbjct: 407 TALINSNGE 415
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL++T+ R +E+++L+ + +LED + E+ R+ E E+ ++
Sbjct: 176 ELQQTRIRIDNLSSEVSQLQKQLAAKEAKLHDLEDILARERESNRRLLADKEREMAEMRA 235
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 236 RMQQQLDEYQELLDIKLALDMEINAYRKLLEGEEERL 272
>gi|390476840|ref|XP_003735191.1| PREDICTED: prelamin-A/C isoform 3 [Callithrix jacchus]
Length = 574
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 9/145 (6%)
Query: 29 GSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFV 88
G +S + ++GS + +KKRKL ES E SS F + G + + EVD DGKFV
Sbjct: 288 GRASSHSSQTQGSGSVTKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEDGKFV 340
Query: 89 KLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHN 148
+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP +
Sbjct: 341 RLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPTD 399
Query: 149 IVMKNQK-FGSGDEISTILLNTDGE 172
+V K Q +G G+ + T L+N+ GE
Sbjct: 400 LVWKAQNTWGCGNSLRTALINSTGE 424
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 159 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 218
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 219 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 275
>gi|410986930|ref|XP_003999761.1| PREDICTED: prelamin-A/C, partial [Felis catus]
Length = 583
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 85/145 (58%), Gaps = 9/145 (6%)
Query: 29 GSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFV 88
G +S + ++GS + +KKRKL E + S F + G + + EVD +GKFV
Sbjct: 319 GRASSHSSQTQGSGSVTKKRKLEAAE-------SRSSFSQHARTSGRVAVEEVDEEGKFV 371
Query: 89 KLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHN 148
+L NK SE+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP +
Sbjct: 372 RLRNKSSEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPSD 430
Query: 149 IVMKNQK-FGSGDEISTILLNTDGE 172
+V K Q +G G+ + T L+N+ GE
Sbjct: 431 LVWKAQNTWGCGNSLRTALINSTGE 455
>gi|291230010|ref|XP_002734960.1| PREDICTED: lamin A/C-like [Saccoglossus kowalevskii]
Length = 577
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 85/144 (59%), Gaps = 13/144 (9%)
Query: 30 SSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVK 89
SS + TP R V +K+R+++ SS T++A G + ITE D +GKF+K
Sbjct: 410 SSQLRSTPMR-QVRGTKRRRID----------ESSSISQTATATGGVAITETDTEGKFIK 458
Query: 90 LYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNI 149
L N ++Q++G+WQL K + +FKF ++AG TVTVW G H PP ++
Sbjct: 459 LQNTTEKDQAMGSWQLKVKADDNEEVTFKFTNRFVLKAGATVTVWCQEA-GQGHNPPSDL 517
Query: 150 VMKNQK-FGSGDEISTILLNTDGE 172
+ KNQK FG+G+++ T+L+++ GE
Sbjct: 518 LWKNQKNFGTGEKVQTVLVDSSGE 541
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELM 261
+++N L+A N L++R K+LE Q+ EQ A +AE++ ++ M QL++Y ELM
Sbjct: 312 SQVNTLKAQNNALSDRVKDLEKQLADEQEASANALKERDAELQNMRDSMAIQLREYEELM 371
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
IKI LD+EIA YR L+E EE L
Sbjct: 372 GIKIALDMEIAAYRKLLEGEEFRL 395
>gi|52782237|dbj|BAD51965.1| lamin A/C [Macaca fascicularis]
gi|84579053|dbj|BAE72960.1| hypothetical protein [Macaca fascicularis]
Length = 571
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 87/147 (59%), Gaps = 12/147 (8%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL ESE R+S F + G + + EVD +GK
Sbjct: 400 GRASSHSSQTQGGGSV--TKKRKL------ESESRSS--FSQHARTSGRVAVEEVDEEGK 449
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 450 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 508
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 509 TDLVWKAQNTWGCGNSLRTALINSTGE 535
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|344286894|ref|XP_003415191.1| PREDICTED: prelamin-A/C isoform 1 [Loxodonta africana]
Length = 664
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 85/147 (57%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T S GS+ +KKRKL E + S F + G + + EVD +GK
Sbjct: 400 GRASSHSSQTQSGGSI--TKKRKLEATE-------SRSSFSQHARTSGRVAVEEVDEEGK 450
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 451 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 509
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 510 TDLVWKAQNTWGCGNSLRTALINSTGE 536
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKESKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|344286896|ref|XP_003415192.1| PREDICTED: prelamin-A/C isoform 2 [Loxodonta africana]
Length = 634
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 85/147 (57%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T S GS+ +KKRKL E + S F + G + + EVD +GK
Sbjct: 400 GRASSHSSQTQSGGSI--TKKRKLEATE-------SRSSFSQHARTSGRVAVEEVDEEGK 450
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 451 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 509
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 510 TDLVWKAQNTWGCGNSLRTALINSTGE 536
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKESKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|383872517|ref|NP_001244822.1| prelamin-A/C [Macaca mulatta]
gi|402856566|ref|XP_003892858.1| PREDICTED: prelamin-A/C [Papio anubis]
gi|355558555|gb|EHH15335.1| hypothetical protein EGK_01409 [Macaca mulatta]
gi|355745734|gb|EHH50359.1| hypothetical protein EGM_01175 [Macaca fascicularis]
gi|380812724|gb|AFE78236.1| prelamin-A/C isoform 1 precursor [Macaca mulatta]
gi|383418339|gb|AFH32383.1| prelamin-A/C isoform 1 precursor [Macaca mulatta]
gi|384947022|gb|AFI37116.1| prelamin-A/C isoform 1 precursor [Macaca mulatta]
Length = 663
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 87/147 (59%), Gaps = 12/147 (8%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL ESE R+S F + G + + EVD +GK
Sbjct: 400 GRASSHSSQTQGGGSV--TKKRKL------ESESRSS--FSQHARTSGRVAVEEVDEEGK 449
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 450 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 508
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 509 TDLVWKAQNTWGCGNSLRTALINSTGE 535
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|324502926|gb|ADY41278.1| Lamin-1 [Ascaris suum]
Length = 602
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 93/157 (59%), Gaps = 9/157 (5%)
Query: 25 VSGAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEER-TSSGFQVTSSAKGNMEITEVDP 83
++ SS + G+P R S KRK I + S R T+ ++ T+++ ++EI D
Sbjct: 430 IAAYSSSQLGGSPRR-----SVKRKRFIASDNSSFFRNTAKTYKTTANSDCDVEIDAHDT 484
Query: 84 DGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATH 143
+GKFV+L NKG E S+G W ++ V E +T +KFH I+ G T+TVWS + G
Sbjct: 485 NGKFVRLINKGEEAVSIGQWS-IKSVASERETVYKFHSRQLIKPGDTITVWSAD-SGEKS 542
Query: 144 EPPHNIVMKNQKFGSGDEISTILLNTDG-ELANQERI 179
PP +VMKNQ++ +GD + T+L++ +G E+A +E +
Sbjct: 543 APPSQLVMKNQQWPAGDHVKTVLVDPEGAEMAMRESV 579
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 11/106 (10%)
Query: 184 RKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQS----KFARM 239
R+E + L L + E + +G ++ + L N ++++ LE+Q+ + + + +
Sbjct: 306 REESARLRLRIHELEKTAGANESRVEAL---NKKISD----LENQLRFVRDDADVRLQQR 358
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++ I LQ E+ L +Y++L E+K+ LD E+ Y++L+E EES L
Sbjct: 359 DSRIAELQQEIDRILSEYQDLFELKVQLDTELRAYQSLLEGEESRL 404
>gi|395729686|ref|XP_002810085.2| PREDICTED: prelamin-A/C [Pongo abelii]
Length = 664
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T S GSV +KKRKL ES E SS F + G + + EVD +GK
Sbjct: 400 GRASSHSSQTQSGGSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGK 450
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 451 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 509
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 510 TDLVWKAQNTWGCGNSLRTALINSTGE 536
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|149751388|ref|XP_001499971.1| PREDICTED: prelamin-A/C isoform 2 [Equus caballus]
Length = 613
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 85/145 (58%), Gaps = 9/145 (6%)
Query: 29 GSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFV 88
G +S + ++G + +KKRKL+ E + S F + G + + EVD +GKFV
Sbjct: 400 GRASSHSSQTQGGSSITKKRKLDSTE-------SRSSFSQHARTSGRVAVEEVDEEGKFV 452
Query: 89 KLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHN 148
+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP +
Sbjct: 453 RLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPSD 511
Query: 149 IVMKNQK-FGSGDEISTILLNTDGE 172
+V K Q +G G+ + T L+N+ GE
Sbjct: 512 LVWKAQNTWGCGNSLRTALINSTGE 536
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQAAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|338724942|ref|XP_003365044.1| PREDICTED: prelamin-A/C [Equus caballus]
gi|338724944|ref|XP_003365045.1| PREDICTED: prelamin-A/C [Equus caballus]
Length = 572
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 85/145 (58%), Gaps = 9/145 (6%)
Query: 29 GSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFV 88
G +S + ++G + +KKRKL+ E + S F + G + + EVD +GKFV
Sbjct: 400 GRASSHSSQTQGGSSITKKRKLDSTE-------SRSSFSQHARTSGRVAVEEVDEEGKFV 452
Query: 89 KLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHN 148
+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP +
Sbjct: 453 RLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPSD 511
Query: 149 IVMKNQK-FGSGDEISTILLNTDGE 172
+V K Q +G G+ + T L+N+ GE
Sbjct: 512 LVWKAQNTWGCGNSLRTALINSTGE 536
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQAAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|328714957|ref|XP_003245502.1| PREDICTED: lamin Dm0-like [Acyrthosiphon pisum]
Length = 325
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 89/143 (62%), Gaps = 12/143 (8%)
Query: 32 SVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLY 91
SV G+PS +KKRKL E E+E S+ V+S++ ++EI EV PDG+FVKLY
Sbjct: 175 SVVGSPS------AKKRKL--FERNETESEFSNIITVSSTS--DIEIREVCPDGRFVKLY 224
Query: 92 NKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATH-EPPHNI 149
NKGS+E +L ++LVR + + V T FKFH ++ +EAG +TVWS H +I
Sbjct: 225 NKGSKEFALRGYELVRTIAEQNVSTVFKFHGSVNLEAGNWLTVWSSTASNQIHKHSAGSI 284
Query: 150 VMKNQKFGSGDEISTILLNTDGE 172
+M Q + GD ++TILLN +G+
Sbjct: 285 IMNIQAWVVGDLMATILLNPEGQ 307
>gi|149751386|ref|XP_001499938.1| PREDICTED: prelamin-A/C isoform 1 [Equus caballus]
Length = 663
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 85/145 (58%), Gaps = 9/145 (6%)
Query: 29 GSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFV 88
G +S + ++G + +KKRKL+ E + S F + G + + EVD +GKFV
Sbjct: 400 GRASSHSSQTQGGSSITKKRKLDSTE-------SRSSFSQHARTSGRVAVEEVDEEGKFV 452
Query: 89 KLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHN 148
+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP +
Sbjct: 453 RLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPSD 511
Query: 149 IVMKNQK-FGSGDEISTILLNTDGE 172
+V K Q +G G+ + T L+N+ GE
Sbjct: 512 LVWKAQNTWGCGNSLRTALINSTGE 536
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQAAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|338724951|ref|XP_003365048.1| PREDICTED: prelamin-A/C [Equus caballus]
Length = 633
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 85/145 (58%), Gaps = 9/145 (6%)
Query: 29 GSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFV 88
G +S + ++G + +KKRKL+ E + S F + G + + EVD +GKFV
Sbjct: 400 GRASSHSSQTQGGSSITKKRKLDSTE-------SRSSFSQHARTSGRVAVEEVDEEGKFV 452
Query: 89 KLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHN 148
+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP +
Sbjct: 453 RLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPSD 511
Query: 149 IVMKNQK-FGSGDEISTILLNTDGE 172
+V K Q +G G+ + T L+N+ GE
Sbjct: 512 LVWKAQNTWGCGNSLRTALINSTGE 536
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQAAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|426219007|ref|XP_004003722.1| PREDICTED: LOW QUALITY PROTEIN: prelamin-A/C [Ovis aries]
Length = 676
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 84/147 (57%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T S SVA KKRKL E + S F + G + + EVD +GK
Sbjct: 411 GRASSHSSQTQSGSSVA--KKRKLESTE-------SRSSFSQHARTSGRVAVEEVDEEGK 461
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 462 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 520
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 521 TDLVWKAQNTWGCGNSLRTALINSTGE 547
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 223 KELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
++LED + E+ R AE++ M +QL +Y+EL++IK+ LD+EI YR L+E EE
Sbjct: 341 RDLEDSLARERDTXEREMAEMR---ARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEE 397
>gi|338724947|ref|XP_003365046.1| PREDICTED: prelamin-A/C [Equus caballus]
Length = 536
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 85/145 (58%), Gaps = 9/145 (6%)
Query: 29 GSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFV 88
G +S + ++G + +KKRKL+ E + S F + G + + EVD +GKFV
Sbjct: 273 GRASSHSSQTQGGSSITKKRKLDSTE-------SRSSFSQHARTSGRVAVEEVDEEGKFV 325
Query: 89 KLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHN 148
+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP +
Sbjct: 326 RLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPSD 384
Query: 149 IVMKNQK-FGSGDEISTILLNTDGE 172
+V K Q +G G+ + T L+N+ GE
Sbjct: 385 LVWKAQNTWGCGNSLRTALINSTGE 409
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 144 LDNARQAAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 203
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 204 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 260
>gi|444719052|gb|ELW59852.1| Prelamin-A/C [Tupaia chinensis]
Length = 665
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 11/158 (6%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL SE R+S F + G + + EVD +GK
Sbjct: 400 GRASSHSSQTQGGGSV--TKKRKLEA-----SESRSS--FSQHARTSGRVAVEEVDEEGK 450
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 451 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQAVTIWAAGA-GATHSPP 509
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
++V K Q +G G + T L+N+ GE +++ +L
Sbjct: 510 TDLVWKAQNTWGCGSSLRTALINSTGEEVAMRKLVRSL 547
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 67/117 (57%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ E E+ ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLADKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|403293747|ref|XP_003937873.1| PREDICTED: prelamin-A/C [Saimiri boliviensis boliviensis]
Length = 810
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GS+ +KKRKL ES E SS F + G + + EVD DGK
Sbjct: 546 GRASSHSSQTQGTGSI--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEDGK 596
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 597 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 655
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 656 TDLVWKAQNTWGCGNSLRTALINSTGE 682
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 417 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 476
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 477 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 533
>gi|449514738|ref|XP_004174707.1| PREDICTED: LOW QUALITY PROTEIN: lamin-B1 [Taeniopygia guttata]
Length = 616
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 85/132 (64%), Gaps = 6/132 (4%)
Query: 42 VAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLG 101
+A K++++++ ESE +S ++SA GN+ I E+D DGKF++L N ++Q +G
Sbjct: 439 LAGGKRKRIDV---EESEASSSVTISHSASATGNVSIEEIDVDGKFIRLKNTSEQDQPMG 495
Query: 102 NWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGD 160
W+++RK+ G+ S+++ ++AG TVT+W+ N G T PP +++ KNQ +G+G+
Sbjct: 496 GWEMIRKI-GDTSASYRYTSRYVLKAGQTVTIWAANA-GVTASPPTDLIWKNQNSWGTGE 553
Query: 161 EISTILLNTDGE 172
++ +L N+ GE
Sbjct: 554 DVKVVLKNSQGE 565
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQ----SKFARMEAEIKRLQT 248
+L E++ R + + L+ + +R +ELE + EQ + A E EI ++
Sbjct: 320 QLNESRMRIDSLSSHITSLQKESRAWQDRAQELEGSLAQEQENCRKRLAEKEKEIAEIRN 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M EQL DY +L+++K+ LD+EI YR L+E EE L
Sbjct: 380 QMQEQLTDYEQLLDVKLALDMEINAYRKLLEGEEERL 416
>gi|338724949|ref|XP_003365047.1| PREDICTED: prelamin-A/C [Equus caballus]
Length = 490
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 85/145 (58%), Gaps = 9/145 (6%)
Query: 29 GSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFV 88
G +S + ++G + +KKRKL+ E + S F + G + + EVD +GKFV
Sbjct: 318 GRASSHSSQTQGGSSITKKRKLDSTE-------SRSSFSQHARTSGRVAVEEVDEEGKFV 370
Query: 89 KLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHN 148
+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP +
Sbjct: 371 RLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPSD 429
Query: 149 IVMKNQK-FGSGDEISTILLNTDGE 172
+V K Q +G G+ + T L+N+ GE
Sbjct: 430 LVWKAQNTWGCGNSLRTALINSTGE 454
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 189 LDNARQAAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 248
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 249 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 305
>gi|417412323|gb|JAA52551.1| Putative nuclear envelope protein lamin intermediate filament
superfamily, partial [Desmodus rotundus]
Length = 689
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GS+ +KKRKL ES E SS F + G + + EVD +GK
Sbjct: 425 GRASSHSSQTQGGGSI--TKKRKL------ESAESRSS-FSQHARTSGRVAVEEVDEEGK 475
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 476 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 534
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 535 TDLVWKAQNTWGCGNSLRTALINSTGE 561
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 69/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R + ++++L+ + ++LED + E
Sbjct: 296 LDNARQSAERNSNLVGAAHEELQQSRIRLDSFSAQLSQLQKQLAAKEAKLRDLEDSLARE 355
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 356 RDTSRRLLAEKEREMADMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 412
>gi|39653934|gb|AAR29466.1| progerin [Homo sapiens]
Length = 614
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL ES E SS F + G + + EVD +GK
Sbjct: 400 GRASSHSSQTQGGGSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGK 450
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 451 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 509
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 510 TDLVWKAQNTWGCGNSLRTALINSTGE 536
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|5031875|ref|NP_005563.1| lamin isoform C [Homo sapiens]
gi|34236|emb|CAA27174.1| unnamed protein product [Homo sapiens]
gi|307108|gb|AAA36164.1| lamin C protein [Homo sapiens]
gi|12653479|gb|AAH00511.1| Lamin A/C [Homo sapiens]
gi|13111979|gb|AAH03162.1| Lamin A/C [Homo sapiens]
gi|119573382|gb|EAW52997.1| lamin A/C, isoform CRA_b [Homo sapiens]
gi|119573384|gb|EAW52999.1| lamin A/C, isoform CRA_b [Homo sapiens]
gi|190689641|gb|ACE86595.1| lamin A/C protein [synthetic construct]
gi|190691003|gb|ACE87276.1| lamin A/C protein [synthetic construct]
Length = 572
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 84/147 (57%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL E + S F + G + + EVD +GK
Sbjct: 400 GRASSHSSQTQGGGSV--TKKRKLESTE-------SRSSFSQHARTSGRVAVEEVDEEGK 450
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 451 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 509
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 510 TDLVWKAQNTWGCGNSLRTALINSTGE 536
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|30584609|gb|AAP36557.1| Homo sapiens lamin A/C [synthetic construct]
gi|60652591|gb|AAX28990.1| lamin A/C [synthetic construct]
gi|60652593|gb|AAX28991.1| lamin A/C [synthetic construct]
Length = 573
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 84/147 (57%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL E + S F + G + + EVD +GK
Sbjct: 400 GRASSHSSQTQGGGSV--TKKRKLESTE-------SRSSFSQHARTSGRVAVEEVDEEGK 450
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 451 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 509
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 510 TDLVWKAQNTWGCGNSLRTALINSTGE 536
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|440903635|gb|ELR54272.1| Prelamin-A/C [Bos grunniens mutus]
Length = 665
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 84/147 (57%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T S SV +KKRKL E + S F + G + + EVD +GK
Sbjct: 400 GRASSHSSQTQSGSSV--TKKRKLETTE-------SRSSFSQHARTSGRVAVEEVDEEGK 450
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 451 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 509
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 510 TDLVWKAQNTWGCGNSLRTALINSTGE 536
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL++++ R ++++L+ + ++LED + E+ R+ E E+ ++
Sbjct: 291 ELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARERDTSRRLLADKEREMAEMRA 350
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 351 RMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|57014047|gb|AAW32540.1| lamin A/C transcript variant 1 [Homo sapiens]
Length = 664
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL ES E SS F + G + + EVD +GK
Sbjct: 400 GRASSHSSQTQGGGSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGK 450
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 451 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 509
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 510 TDLVWKAQNTWGCGNSLRTALINSTGE 536
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|57014043|gb|AAW32538.1| lamin A/C transcript variant 1 [Homo sapiens]
Length = 664
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL ES E SS F + G + + EVD +GK
Sbjct: 400 GRASSHSSQTQGGGSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGK 450
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 451 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 509
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 510 TDLVWKAQNTWGCGNSLRTALINSTGE 536
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|27436946|ref|NP_733821.1| lamin isoform A [Homo sapiens]
gi|426332019|ref|XP_004026990.1| PREDICTED: prelamin-A/C [Gorilla gorilla gorilla]
gi|125962|sp|P02545.1|LMNA_HUMAN RecName: Full=Prelamin-A/C; Contains: RecName: Full=Lamin-A/C;
AltName: Full=70 kDa lamin; AltName: Full=Renal
carcinoma antigen NY-REN-32; Flags: Precursor
gi|54035059|gb|AAH14507.1| Lamin A/C [Homo sapiens]
gi|190690113|gb|ACE86831.1| lamin A/C protein [synthetic construct]
gi|190691485|gb|ACE87517.1| lamin A/C protein [synthetic construct]
gi|261857464|dbj|BAI45254.1| lamin A/C [synthetic construct]
Length = 664
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL ES E SS F + G + + EVD +GK
Sbjct: 400 GRASSHSSQTQGGGSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGK 450
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 451 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 509
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 510 TDLVWKAQNTWGCGNSLRTALINSTGE 536
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|148727282|ref|NP_001092024.1| prelamin-A/C [Pan troglodytes]
gi|146741476|dbj|BAF62394.1| lamin A/C, transcript variant 1 [Pan troglodytes verus]
Length = 664
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL ES E SS F + G + + EVD +GK
Sbjct: 400 GRASSHSSQTQGGGSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGK 450
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 451 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 509
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 510 TDLVWKAQNTWGCGNSLRTALINSTGE 536
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|27436948|ref|NP_733822.1| lamin isoform A-delta10 [Homo sapiens]
Length = 634
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL ES E SS F + G + + EVD +GK
Sbjct: 400 GRASSHSSQTQGGGSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGK 450
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 451 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 509
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 510 TDLVWKAQNTWGCGNSLRTALINSTGE 536
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|77404182|ref|NP_001029225.1| prelamin-A/C [Bos taurus]
gi|74354719|gb|AAI02843.1| Lamin A/C [Bos taurus]
gi|296489648|tpg|DAA31761.1| TPA: lamin A/C [Bos taurus]
Length = 572
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 84/147 (57%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T S SV +KKRKL E + S F + G + + EVD +GK
Sbjct: 400 GRASSHSSQTQSGSSV--TKKRKLESTE-------SRSSFSQHARTSGRVAVEEVDEEGK 450
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 451 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 509
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 510 TDLVWKAQNTWGCGNSLRTALINSTGE 536
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 223 KELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ E E+ ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDSLARERDTSRRLLADKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>gi|194379984|dbj|BAG58344.1| unnamed protein product [Homo sapiens]
Length = 574
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL ES E SS F + G + + EVD +GK
Sbjct: 288 GRASSHSSQTQGGGSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGK 338
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 339 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 397
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 398 TDLVWKAQNTWGCGNSLRTALINSTGE 424
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 67/117 (57%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 159 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 218
Query: 233 QSK----FARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ A+ E E+ ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 219 RDTSRRLLAKKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 275
>gi|34228|emb|CAA27173.1| unnamed protein product [Homo sapiens]
gi|224901|prf||1203377A lamin A
Length = 702
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL ES E SS F + G + + EVD +GK
Sbjct: 400 GRASSHSSQTQGGGSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGK 450
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 451 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 509
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 510 TDLVWKAQNTWGCGNSLRTALINSTGE 536
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|417412444|gb|JAA52609.1| Putative nuclear envelope protein lamin intermediate filament
superfamily, partial [Desmodus rotundus]
Length = 719
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GS+ +KKRKL ES E SS F + G + + EVD +GK
Sbjct: 455 GRASSHSSQTQGGGSI--TKKRKL------ESAESRSS-FSQHARTSGRVAVEEVDEEGK 505
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 506 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 564
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 565 TDLVWKAQNTWGCGNSLRTALINSTGE 591
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 69/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R + ++++L+ + ++LED + E
Sbjct: 326 LDNARQSAERNSNLVGAAHEELQQSRIRLDSFSAQLSQLQKQLAAKEAKLRDLEDSLARE 385
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 386 RDTSRRLLAEKEREMADMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 442
>gi|386856|gb|AAA36160.1| lamin A protein, partial [Homo sapiens]
Length = 515
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL ES E SS F + G + + EVD +GK
Sbjct: 251 GRASSHSSQTQGGGSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGK 301
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 302 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 360
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 361 TDLVWKAQNTWGCGNSLRTALINSTGE 387
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 122 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 181
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 182 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 238
>gi|383792150|ref|NP_001244303.1| lamin isoform D [Homo sapiens]
Length = 574
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL ES E SS F + G + + EVD +GK
Sbjct: 288 GRASSHSSQTQGGGSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGK 338
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 339 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 397
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 398 TDLVWKAQNTWGCGNSLRTALINSTGE 424
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 159 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 218
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 219 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 275
>gi|358337894|dbj|GAA32167.2| lamin Dm0 [Clonorchis sinensis]
Length = 673
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 83/141 (58%), Gaps = 12/141 (8%)
Query: 41 SVAPSKKRKLNILEEYESEERTSSGF---------QVTSSAKGNMEI-TEVDPDGKFVKL 90
+V P K+R+++ E + T + F +V+S+A G +E E D GK+VKL
Sbjct: 419 NVQPGKRRRMDDGSEGDETGLTGASFISSKSRYAYRVSSTASGPVEFFKEQDTQGKWVKL 478
Query: 91 YNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIV 150
N +EE S+GNW+LV + G+ +T FKFHR+L ++ G T T+WS + E TH PP +IV
Sbjct: 479 NNTSTEEVSVGNWELVHEADGQ-ETRFKFHRSLMLKPGTTCTIWSSDTE-TTHNPPTDIV 536
Query: 151 MKNQKFGSGDEISTILLNTDG 171
MKN+ F E LL+ +G
Sbjct: 537 MKNKSFHPSPEAVITLLDAEG 557
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 218 LTERNKELEDQIEYEQ----SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQ 273
L R ++LE+Q+E E+ S+ + EI+RL+ E+ E +++ +LM KI LD EI
Sbjct: 336 LQHRVEDLENQLEKERREHDSQLSLQSEEIRRLRDELEESFREFSDLMNTKIALDQEILM 395
Query: 274 YRNLMEAEESSL 285
YR ++E EES L
Sbjct: 396 YRKMLEGEESRL 407
>gi|410911616|ref|XP_003969286.1| PREDICTED: lamin-A-like [Takifugu rubripes]
Length = 648
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 68/104 (65%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G + + EVD +GK+V+L NK E+Q+LGNWQL R+V FKF ++AG
Sbjct: 445 ASASGRVTVDEVDLEGKYVRLSNKADEDQNLGNWQLKRQVGTNPPIIFKFPVKFSLKAGQ 504
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
VT+W+ G TH PP ++V KNQ +G+GD + TIL++ +GE
Sbjct: 505 RVTIWASGA-GRTHSPPSDLVWKNQPSWGTGDLLQTILISANGE 547
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 69/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ ++SS L+ EL++T+ R ++++L+ + K+LED + E
Sbjct: 265 LDNARQSADRSSHLVGAAHEELQQTRIRLDSMSAQLSQLQKQLAAREAKIKDLEDGLSRE 324
Query: 233 QSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ + E+ +++ +M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 325 RETTRRLLGDKDREMAQMRQKMQQQLDEYQELLDVKLALDMEICAYRKLLEGEEQRL 381
>gi|332220702|ref|XP_003259493.1| PREDICTED: prelamin-A/C [Nomascus leucogenys]
Length = 664
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GS+ +KKRKL ES E SS F + G + + EVD +GK
Sbjct: 400 GRASSHSSQTQGGGSI--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGK 450
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 451 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 509
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 510 TDLVWKAQNTWGCGNSLRTALINSTGE 536
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|119573381|gb|EAW52996.1| lamin A/C, isoform CRA_a [Homo sapiens]
Length = 698
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL ES E SS F + G + + EVD +GK
Sbjct: 526 GRASSHSSQTQGGGSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGK 576
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 577 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 635
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 636 TDLVWKAQNTWGCGNSLRTALINSTGE 662
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 397 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 456
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 457 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 513
>gi|119573383|gb|EAW52998.1| lamin A/C, isoform CRA_c [Homo sapiens]
Length = 790
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL ES E SS F + G + + EVD +GK
Sbjct: 526 GRASSHSSQTQGGGSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGK 576
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 577 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 635
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 636 TDLVWKAQNTWGCGNSLRTALINSTGE 662
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 397 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 456
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 457 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 513
>gi|397500859|ref|XP_003821122.1| PREDICTED: prelamin-A/C [Pan paniscus]
Length = 790
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL ES E SS F + G + + EVD +GK
Sbjct: 526 GRASSHSSQTQGGGSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGK 576
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 577 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 635
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 636 TDLVWKAQNTWGCGNSLRTALINSTGE 662
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 397 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 456
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 457 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 513
>gi|119573385|gb|EAW53000.1| lamin A/C, isoform CRA_d [Homo sapiens]
Length = 760
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL ES E SS F + G + + EVD +GK
Sbjct: 526 GRASSHSSQTQGGGSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGK 576
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 577 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 635
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 636 TDLVWKAQNTWGCGNSLRTALINSTGE 662
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 397 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 456
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 457 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 513
>gi|190337683|gb|AAI63799.1| Lamin A [Danio rerio]
gi|190337691|gb|AAI63807.1| Lamin A [Danio rerio]
Length = 659
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 92/157 (58%), Gaps = 14/157 (8%)
Query: 26 SGAGSSS--VAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVT-------SSAKGNM 76
SG+GS + V + SR S +KKR+LN + +S+ + G VT +SA G +
Sbjct: 402 SGSGSHTRVVQSSTSRTSSGSAKKRRLN---DNDSDASSVVGGTVTRTRISQQASASGRV 458
Query: 77 EITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSF 136
+ EVD +GKFV+L NK ++QSLG+WQ+ R++ +KF ++AG TVT+W+
Sbjct: 459 TVDEVDLEGKFVRLNNKSDQDQSLGHWQVKRQIGSGTPIVYKFPPKFNLKAGQTVTIWAA 518
Query: 137 NVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
G TH PP ++V K Q +GSGD T L+++ GE
Sbjct: 519 GA-GGTHSPPSDLVWKTQNSWGSGDLFQTTLISSSGE 554
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL++T+ R +++++L+ + +ELE+ + E+ R E E+ ++
Sbjct: 288 ELQQTRVRMEGVSSQLSQLQKQLAAREAKIRELEEALSRERDILRRRLEDKEKEMAEMRQ 347
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL++IK+ LD+EI+ YR L+E EE L
Sbjct: 348 RMQQQLDEYQELLDIKLALDMEISAYRKLLEGEEERL 384
>gi|23308641|ref|NP_694503.1| prelamin-A/C [Danio rerio]
gi|16660150|gb|AAL27547.1|AF397016_1 nuclear lamin A [Danio rerio]
Length = 659
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 92/157 (58%), Gaps = 14/157 (8%)
Query: 26 SGAGSSS--VAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVT-------SSAKGNM 76
SG+GS + V + SR S +KKR+LN + +S+ + G VT +SA G +
Sbjct: 402 SGSGSHTRVVQSSTSRTSSGSAKKRRLN---DNDSDASSVVGGTVTRTRIFQQASASGRV 458
Query: 77 EITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSF 136
+ EVD +GKFV+L NK ++QSLG+WQ+ R++ +KF ++AG TVT+W+
Sbjct: 459 TVDEVDLEGKFVRLNNKSDQDQSLGHWQVKRQIGSGTPIVYKFPPKFNLKAGQTVTIWAA 518
Query: 137 NVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
G TH PP ++V K Q +GSGD T L+++ GE
Sbjct: 519 GA-GGTHSPPSDLVWKTQNSWGSGDLFQTTLISSSGE 554
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL++T+ R +++++L+ + +ELE+ + E+ R E E+ ++
Sbjct: 288 ELQQTRVRMEGVSSQLSQLQKQLAAREAKIRELEEALSRERDILRRRLEDKEKEMAEMRQ 347
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL++IK+ LD+EI+ YR L+E EE L
Sbjct: 348 RMQQQLDEYQELLDIKLALDMEISAYRKLLEGEEERL 384
>gi|405967665|gb|EKC32801.1| Lamin Dm0 [Crassostrea gigas]
Length = 614
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 94/149 (63%), Gaps = 9/149 (6%)
Query: 30 SSSVAGTPSRGSVAPSKKRKLNILEEY-ESEERTSSGFQVTSSAKGNMEITEVDPDGKFV 88
+SS TP GS K++++ + E+ E E ++SGF SS+ GN+ I E+D DGKF+
Sbjct: 407 TSSPGSTP--GSRRGHKRKRVALAEQVQEFESHSTSGFSSQSSSSGNINIEEIDSDGKFI 464
Query: 89 KLYNKGSEEQSLGNWQL-VRKVQ---GEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHE 144
KL+N+ E+ ++G+WQL +R + E K +KFHR+L+++A TVWS G TH
Sbjct: 465 KLHNESDEDVAVGSWQLQLRHSEADDAESKAHYKFHRSLQMKAHTFCTVWSSGT-GQTHS 523
Query: 145 PPHNIVMKNQKF-GSGDEISTILLNTDGE 172
PP ++VMK K+ + D + +L+N+DGE
Sbjct: 524 PPSDLVMKGSKWVPNKDAMVCVLINSDGE 552
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQT 248
E+K T+ R + +E+ +L+ N L + L+ Q+ EQ +F + EI L
Sbjct: 306 EIKITRKRIDEMSSELTKLKKENAALEAQVSNLQSQLTREQEEFEERLTMKDQEIADLHA 365
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ EQ ++Y +++E+KI LD EIA YR L+E EE L
Sbjct: 366 TIEEQSQEYADILEVKIKLDNEIATYRKLLETEEERL 402
>gi|339253866|ref|XP_003372156.1| lamin-L [Trichinella spiralis]
gi|316967482|gb|EFV51899.1| lamin-L [Trichinella spiralis]
Length = 541
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 86/145 (59%), Gaps = 6/145 (4%)
Query: 37 PSRGSVAPS-KKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGS 95
P GS +P+ + +K IL E E+E + ++ S G++EI + D DG FVKL NK S
Sbjct: 368 PPPGSESPAVRPKKRRILHERETE--VYATYETNSECIGDIEIIDHDVDGLFVKLNNKSS 425
Query: 96 EEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK 155
++ SL W +VR + + ++KFH L ++ G +TVWS N G H PP ++VMKNQ
Sbjct: 426 KDLSLNGWSVVR-AGTDREVTYKFHPKLVMKPGKQLTVWSANA-GVQHNPPSDLVMKNQH 483
Query: 156 FGSGDEISTILLNT-DGELANQERI 179
+ G+ I T ++N D E+A +E +
Sbjct: 484 WPVGNRIRTSVVNPQDEEVAWRESV 508
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 218 LTERNKELEDQ-IEYEQSKFARM---EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQ 273
L ++N+ELE + +AR+ + EI++L+ E+ ++ Y++LM+IK+ L VEI
Sbjct: 290 LEKKNRELESRYTRLHDEMYARLSSRDTEIRQLRDEIALMIQQYKDLMDIKVQLSVEIEA 349
Query: 274 YRNLMEAEESSL 285
YR L+E EE L
Sbjct: 350 YRRLLEGEEKRL 361
>gi|52867|emb|CAA38032.1| lamin B2 [Mus musculus]
Length = 592
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 78/141 (55%), Gaps = 22/141 (15%)
Query: 34 AGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSS-AKGNMEITEVDPDGKFVKLYN 92
+G+PSR S R SSG ++ + A G + I EVDP+G+FV+L N
Sbjct: 422 SGSPSRAS-------------------RVSSGSRLAQTVATGVVNIDEVDPEGRFVRLKN 462
Query: 93 KGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMK 152
++QSLGNW++ R+V ++KF + AG TVTVW+ GATH PP +V K
Sbjct: 463 SSDKDQSLGNWRIKRQVLEGEDIAYKFTPKYVLRAGQTVTVWAAGA-GATHSPPSTLVWK 521
Query: 153 NQ-KFGSGDEISTILLNTDGE 172
+Q +G G+ T L++ DGE
Sbjct: 522 SQTNWGPGESFRTALVSADGE 542
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 224 ELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLME 279
ELE+ + E+ KF +M E E+ ++ M +QL +Y+EL++IK+ LD+EI+ YR L+E
Sbjct: 315 ELEEALRGERDKFRKMLDAKEQEMTEVRDRMQQQLAEYQELLDIKLALDMEISAYRKLLE 374
Query: 280 AEESSL 285
EE L
Sbjct: 375 GEEERL 380
>gi|355699521|gb|AES01155.1| lamin A/C [Mustela putorius furo]
Length = 583
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 84/151 (55%), Gaps = 18/151 (11%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYES----EERTSSGFQVTSSAKGNMEITEVD 82
G SS + T GSV +KKRKL E S RTS G + + EVD
Sbjct: 416 GRASSHSSQTQGTGSV--TKKRKLESSESRSSSFSQHARTS----------GRVAVEEVD 463
Query: 83 PDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGAT 142
DGKFV+L NK SE+QS+GNWQ+ R+ + +++F ++AG VT+W+ GAT
Sbjct: 464 EDGKFVRLRNKSSEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GAT 522
Query: 143 HEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
H PP ++V K Q +G G+ + T L+N+ GE
Sbjct: 523 HSPPTDLVWKAQNTWGCGNSLRTALINSTGE 553
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 287 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDALARE 346
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 347 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 403
>gi|126307648|ref|XP_001367335.1| PREDICTED: prelamin-A/C isoform 2 [Monodelphis domestica]
Length = 633
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 79/132 (59%), Gaps = 9/132 (6%)
Query: 45 SKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQ 104
+KKRKL SE R+S F + G + + EVD +GKFV+L NK +E+QSLGNWQ
Sbjct: 416 TKKRKLET-----SESRSS--FSQHARTSGRVAVEEVDEEGKFVRLRNKSNEDQSLGNWQ 468
Query: 105 LVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEIS 163
+ R+ E S++F ++AG VT+W+ GATH PP ++V K Q +G G+ +
Sbjct: 469 IKRQNGDEPLLSYRFPPKFTLKAGQVVTIWASGA-GATHSPPTDMVWKAQSSWGCGNSLR 527
Query: 164 TILLNTDGELAN 175
T L++ GE A+
Sbjct: 528 TALISATGEGAH 539
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDALARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>gi|194376756|dbj|BAG57524.1| unnamed protein product [Homo sapiens]
Length = 228
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 91/158 (57%), Gaps = 11/158 (6%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL ES E SS F + G + + EVD +GK
Sbjct: 56 GRASSHSSQTQGGGSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGK 106
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 107 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 165
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
++V K Q +G G+ + T L+N+ GE +++ ++
Sbjct: 166 TDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVRSV 203
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 246 LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 4 MRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 43
>gi|348579324|ref|XP_003475430.1| PREDICTED: prelamin-A/C-like [Cavia porcellus]
Length = 624
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 11/134 (8%)
Query: 40 GSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQS 99
GS+ +KKRKL E + S F + G + + EVD +GKFV+L NK +E+QS
Sbjct: 373 GSI--TKKRKLEATE-------SRSSFSQHARTSGRVAVEEVDEEGKFVRLRNKSNEDQS 423
Query: 100 LGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGS 158
+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP ++V K Q +G
Sbjct: 424 MGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWASGA-GATHSPPTDLVWKAQNTWGC 482
Query: 159 GDEISTILLNTDGE 172
G+ + T L+N+ GE
Sbjct: 483 GNSLRTALINSTGE 496
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 67/117 (57%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 229 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 288
Query: 233 QSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ E E+ ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 289 RDTSRRLLADKEREMADMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 345
>gi|344250962|gb|EGW07066.1| Lamin-A/C [Cricetulus griseus]
Length = 563
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 76/129 (58%), Gaps = 9/129 (6%)
Query: 45 SKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQ 104
+KKRKL E + S F + G + + EVD +GKFV+L NK +E+QS+GNWQ
Sbjct: 416 TKKRKLESTE-------SRSSFSQHARTSGRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQ 468
Query: 105 LVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEIS 163
+ R+ + +++F ++AG VT+W+ GATH PP ++V K Q +G G+ +
Sbjct: 469 IKRQNGDDPLMTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPTDLVWKAQNTWGCGNSLR 527
Query: 164 TILLNTDGE 172
T L+N+ GE
Sbjct: 528 TALINSTGE 536
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>gi|228591|prf||1807162A lamin B2
Length = 596
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 78/142 (54%), Gaps = 23/142 (16%)
Query: 34 AGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVT--SSAKGNMEITEVDPDGKFVKLY 91
+G+PSR S R SSG ++ + A G + I EVDP+G+FV+L
Sbjct: 425 SGSPSRAS-------------------RVSSGSRLAQQTVATGVVNIDEVDPEGRFVRLK 465
Query: 92 NKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVM 151
N ++QSLGNW++ R+V ++KF + AG TVTVW+ GATH PP +V
Sbjct: 466 NSSDKDQSLGNWRIKRQVLEGEDIAYKFTPKYVLRAGQTVTVWAAGA-GATHSPPSTLVW 524
Query: 152 KNQ-KFGSGDEISTILLNTDGE 172
K+Q +G G+ T L++ DGE
Sbjct: 525 KSQTNWGPGESFRTALVSADGE 546
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 224 ELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLME 279
ELE+ + E+ KF +M E E+ ++ M +QL +Y+EL++IK+ LD+EI+ YR L+E
Sbjct: 315 ELEEALAGERDKFRKMLDAKEQEMTEVRDRMQQQLAEYQELLDIKLALDMEISAYRKLLE 374
Query: 280 AEESSL 285
EE L
Sbjct: 375 GEEERL 380
>gi|354481554|ref|XP_003502966.1| PREDICTED: prelamin-A/C-like isoform 1 [Cricetulus griseus]
Length = 664
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 78/129 (60%), Gaps = 9/129 (6%)
Query: 45 SKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQ 104
+KKRKL ES E SS F + G + + EVD +GKFV+L NK +E+QS+GNWQ
Sbjct: 416 TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQ 468
Query: 105 LVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEIS 163
+ R+ + +++F ++AG VT+W+ GATH PP ++V K Q +G G+ +
Sbjct: 469 IKRQNGDDPLMTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPTDLVWKAQNTWGCGNSLR 527
Query: 164 TILLNTDGE 172
T L+N+ GE
Sbjct: 528 TALINSTGE 536
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|113195686|ref|NP_034852.2| lamin-B2 [Mus musculus]
gi|85700429|sp|P21619.2|LMNB2_MOUSE RecName: Full=Lamin-B2; Flags: Precursor
gi|148699526|gb|EDL31473.1| lamin B2 [Mus musculus]
Length = 596
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 78/142 (54%), Gaps = 23/142 (16%)
Query: 34 AGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVT--SSAKGNMEITEVDPDGKFVKLY 91
+G+PSR S R SSG ++ + A G + I EVDP+G+FV+L
Sbjct: 425 SGSPSRAS-------------------RVSSGSRLAQQTVATGVVNIDEVDPEGRFVRLK 465
Query: 92 NKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVM 151
N ++QSLGNW++ R+V ++KF + AG TVTVW+ GATH PP +V
Sbjct: 466 NSSDKDQSLGNWRIKRQVLEGEDIAYKFTPKYVLRAGQTVTVWAAGA-GATHSPPSTLVW 524
Query: 152 KNQ-KFGSGDEISTILLNTDGE 172
K+Q +G G+ T L++ DGE
Sbjct: 525 KSQTNWGPGESFRTALVSADGE 546
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 224 ELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLME 279
ELE+ + E+ KF +M E E+ ++ M +QL +Y+EL++IK+ LD+EI+ YR L+E
Sbjct: 315 ELEEALAGERDKFRKMLDAKEQEMTEVRDAMQQQLAEYQELLDIKLALDMEISAYRKLLE 374
Query: 280 AEESSL 285
EE L
Sbjct: 375 GEEERL 380
>gi|126307646|ref|XP_001367284.1| PREDICTED: prelamin-A/C isoform 1 [Monodelphis domestica]
Length = 663
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 77/129 (59%), Gaps = 9/129 (6%)
Query: 45 SKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQ 104
+KKRKL SE R+S F + G + + EVD +GKFV+L NK +E+QSLGNWQ
Sbjct: 416 TKKRKLET-----SESRSS--FSQHARTSGRVAVEEVDEEGKFVRLRNKSNEDQSLGNWQ 468
Query: 105 LVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEIS 163
+ R+ E S++F ++AG VT+W+ GATH PP ++V K Q +G G+ +
Sbjct: 469 IKRQNGDEPLLSYRFPPKFTLKAGQVVTIWASGA-GATHSPPTDMVWKAQSSWGCGNSLR 527
Query: 164 TILLNTDGE 172
T L++ GE
Sbjct: 528 TALISATGE 536
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLSAKEAKLRDLEDALARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|354481558|ref|XP_003502968.1| PREDICTED: prelamin-A/C-like isoform 3 [Cricetulus griseus]
Length = 633
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 78/129 (60%), Gaps = 9/129 (6%)
Query: 45 SKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQ 104
+KKRKL ES E SS F + G + + EVD +GKFV+L NK +E+QS+GNWQ
Sbjct: 416 TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQ 468
Query: 105 LVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEIS 163
+ R+ + +++F ++AG VT+W+ GATH PP ++V K Q +G G+ +
Sbjct: 469 IKRQNGDDPLMTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPTDLVWKAQNTWGCGNSLR 527
Query: 164 TILLNTDGE 172
T L+N+ GE
Sbjct: 528 TALINSTGE 536
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|354481556|ref|XP_003502967.1| PREDICTED: prelamin-A/C-like isoform 2 [Cricetulus griseus]
Length = 662
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 78/129 (60%), Gaps = 9/129 (6%)
Query: 45 SKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQ 104
+KKRKL ES E SS F + G + + EVD +GKFV+L NK +E+QS+GNWQ
Sbjct: 416 TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQ 468
Query: 105 LVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEIS 163
+ R+ + +++F ++AG VT+W+ GATH PP ++V K Q +G G+ +
Sbjct: 469 IKRQNGDDPLMTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPTDLVWKAQNTWGCGNSLR 527
Query: 164 TILLNTDGE 172
T L+N+ GE
Sbjct: 528 TALINSTGE 536
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|162139823|ref|NP_001104727.1| prelamin-A/C [Sus scrofa]
gi|85701138|sp|Q3ZD69.1|LMNA_PIG RecName: Full=Prelamin-A/C; Contains: RecName: Full=Lamin-A/C;
Flags: Precursor
gi|66352014|gb|AAY44741.1| lamin A [Sus scrofa]
Length = 664
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 86/150 (57%), Gaps = 17/150 (11%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYES---EERTSSGFQVTSSAKGNMEITEVDP 83
G SS + T S GSV +KKRKL E S RTS G + + EVD
Sbjct: 400 GRASSHSSQTQSGGSV--TKKRKLESSESRSSFSQHARTS----------GRVAVEEVDE 447
Query: 84 DGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATH 143
+GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH
Sbjct: 448 EGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATH 506
Query: 144 EPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
PP ++V K+Q +G G+ + T L+N+ GE
Sbjct: 507 SPPADLVWKSQNTWGCGNSLRTALINSTGE 536
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 67/117 (57%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ E E+ ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLADKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|27503473|gb|AAH42430.1| Lamin B2 [Mus musculus]
gi|30704673|gb|AAH51985.1| Lamin B2 [Mus musculus]
Length = 615
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 23/143 (16%)
Query: 33 VAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVT--SSAKGNMEITEVDPDGKFVKL 90
+G+PSR S R SSG ++ + A G + I EVDP+G+FV+L
Sbjct: 443 TSGSPSRAS-------------------RVSSGSRLAQQTVATGVVNIDEVDPEGRFVRL 483
Query: 91 YNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIV 150
N ++QSLGNW++ R+V ++KF + AG TVTVW+ GATH PP +V
Sbjct: 484 KNSSDKDQSLGNWRIKRQVLEGEDIAYKFTPKYVLRAGQTVTVWAAGA-GATHSPPSTLV 542
Query: 151 MKNQ-KFGSGDEISTILLNTDGE 172
K+Q +G G+ T L++ DGE
Sbjct: 543 WKSQTNWGPGESFRTALVSADGE 565
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 224 ELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLME 279
ELE+ + E+ KF +M E E+ ++ M +QL +Y+EL++IK+ LD+EI+ YR L+E
Sbjct: 334 ELEEALAGERDKFRKMLDAKEQEMTEVRDAMQQQLAEYQELLDIKLALDMEISAYRKLLE 393
Query: 280 AEESSL 285
EE L
Sbjct: 394 GEEERL 399
>gi|66352015|gb|AAY44742.1| lamin C [Sus scrofa]
Length = 572
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 86/150 (57%), Gaps = 17/150 (11%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYES---EERTSSGFQVTSSAKGNMEITEVDP 83
G SS + T S GSV +KKRKL E S RTS G + + EVD
Sbjct: 400 GRASSHSSQTQSGGSV--TKKRKLESSESRSSFSQHARTS----------GRVAVEEVDE 447
Query: 84 DGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATH 143
+GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH
Sbjct: 448 EGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATH 506
Query: 144 EPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
PP ++V K+Q +G G+ + T L+N+ GE
Sbjct: 507 SPPADLVWKSQNTWGCGNSLRTALINSTGE 536
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 223 KELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ E E+ ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDSLARERDTSRRLLADKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>gi|45384214|ref|NP_990618.1| lamin-A [Gallus gallus]
gi|125961|sp|P13648.1|LMNA_CHICK RecName: Full=Lamin-A; Flags: Precursor
gi|63556|emb|CAA34762.1| unnamed protein product [Gallus gallus]
Length = 657
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 70/110 (63%), Gaps = 2/110 (1%)
Query: 64 SGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTL 123
+ F + G + + EVD +G+FV+L NK +E+Q+LGNWQ+ R+ + +++F
Sbjct: 429 TSFSHHARTSGRVGVEEVDLEGRFVRLRNKSNEDQALGNWQVKRQNGDDPPLTYRFPPKF 488
Query: 124 KIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
++AG VT+W+ GATH PP ++V K Q +GSGD + T L+N++GE
Sbjct: 489 TLKAGQAVTIWASGA-GATHSPPSDVVWKAQSSWGSGDSLRTALINSNGE 537
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELR----AANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQT 248
EL++T R E+++L+ A +L E + L + E + A E E+ ++
Sbjct: 290 ELQQTHIRIDSLSAELSQLQKQLAAKEAKLREVEEALSREREGGRRLLAEKEREMAEMRA 349
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 350 RMQQQLDEYQELLDIKLALDMEINAYRKLLEGEEERL 386
>gi|351696643|gb|EHA99561.1| Lamin-A/C [Heterocephalus glaber]
Length = 787
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 81/134 (60%), Gaps = 11/134 (8%)
Query: 40 GSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQS 99
GS+ +KKRKL ES E SS F + G + + EVD GKFV+L+NK +E+QS
Sbjct: 448 GSI--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEGGKFVRLHNKSNEDQS 498
Query: 100 LGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGS 158
+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP ++V K Q +G
Sbjct: 499 MGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWASGA-GATHSPPTDLVWKAQSTWGC 557
Query: 159 GDEISTILLNTDGE 172
G+ + T L+N+ GE
Sbjct: 558 GNSLRTALINSTGE 571
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 67/117 (57%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 305 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 364
Query: 233 QSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ E E+ ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 365 RDTSRRLLADKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 421
>gi|432910836|ref|XP_004078549.1| PREDICTED: lamin-A-like [Oryzias latipes]
Length = 600
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G + + EVD +GKF++L NK E+QSLG+WQ+ +V ++KF ++AG
Sbjct: 416 ASASGRIVVNEVDLEGKFIRLSNKSDEDQSLGSWQVKAQVGDGNPVTYKFPSKFSLKAGA 475
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
TVT+W+ + G TH PP ++V KNQ +G+GD + IL+++ GE
Sbjct: 476 TVTIWAAS-GGGTHNPPTDLVWKNQNSWGTGDSLEIILVSSSGE 518
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL++T+ R +M +L+ + +ELE+ + E+ R + E+ +
Sbjct: 249 ELQQTRSRLEGLTLQMTQLQKQLSASEAKVRELEEALSRERDLMRRRLEDKDREMAENRA 308
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL+DY+EL++IK+ LD+EI+ YR L+E EE L
Sbjct: 309 RMQQQLEDYQELLDIKLALDMEISHYRTLLEGEEERL 345
>gi|301783137|ref|XP_002927000.1| PREDICTED: LOW QUALITY PROTEIN: lamin-A/C-like [Ailuropoda
melanoleuca]
Length = 799
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 10/147 (6%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GS+ +KKRKL ES E SS F + G + + EVD +GK
Sbjct: 534 GRASSHSSQTQGTGSI--TKKRKL------ESAESRSSSFSQHARTSGRVAVEEVDEEGK 585
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK SE+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 586 FVRLRNKSSEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 644
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 645 TDLVWKAQNTWGCGNSLRTALINSTGE 671
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 405 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 464
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 465 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 521
>gi|395532232|ref|XP_003768175.1| PREDICTED: prelamin-A/C [Sarcophilus harrisii]
Length = 505
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 78/131 (59%), Gaps = 9/131 (6%)
Query: 43 APSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGN 102
+ +KKRKL SE R+S F + G + + EVD +GKFV+L NK +E+QS+GN
Sbjct: 256 SATKKRKLET-----SESRSS--FSQHARTSGRVAVEEVDEEGKFVRLRNKSNEDQSMGN 308
Query: 103 WQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDE 161
WQ+ R+ E S++F ++AG VT+W+ GATH PP ++V K Q +G G+
Sbjct: 309 WQIKRQNGDEPLLSYRFPPKFTLKAGQVVTIWASGA-GATHSPPTDMVWKAQSSWGCGNS 367
Query: 162 ISTILLNTDGE 172
+ T L++ GE
Sbjct: 368 LRTALISATGE 378
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKR----LQT 248
EL++++ R ++++L+ + ++LED + E+ R+ AE +R ++
Sbjct: 133 ELQQSRIRIDSLSAQLSQLQKQLSAKEAKLRDLEDALARERDTSRRLLAEKEREMAEMRA 192
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 193 RMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 229
>gi|126323623|ref|XP_001372674.1| PREDICTED: lamin-B2 [Monodelphis domestica]
Length = 608
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Query: 72 AKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTV 131
A GN+ I E+D +GKFV+L N ++QSLGNW+L R++ + ++KF + AG TV
Sbjct: 459 ATGNISIEEIDLEGKFVQLKNSSDKDQSLGNWRLKRQIGDGEEIAYKFTPKYVLRAGQTV 518
Query: 132 TVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
T+W+ + G TH PP +V KNQ +G+G T L+N DGE
Sbjct: 519 TIWAADA-GVTHSPPSVLVWKNQSSWGTGGNFRTYLVNADGE 559
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 290 ELKEARMRVESLSYQLSSLQKQASAAEDRIRELEEILGGEREKFRKMLDAKEREMTEMRD 349
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 350 QMQQQLTEYQELLDVKLALDMEINAYRKLLEGEEERL 386
>gi|188219589|ref|NP_034851.2| lamin-B1 [Mus musculus]
gi|17865719|sp|P14733.3|LMNB1_MOUSE RecName: Full=Lamin-B1; Flags: Precursor
gi|1398996|dbj|BAA08784.1| lamin B1 [Mus musculus]
gi|30931159|gb|AAH52729.1| Lmnb1 protein [Mus musculus]
gi|34849832|gb|AAH58392.1| Lmnb1 protein [Mus musculus]
gi|148677925|gb|EDL09872.1| lamin B1, isoform CRA_a [Mus musculus]
Length = 588
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVTV
Sbjct: 441 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTV 499
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 500 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 538
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 293 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDMLAKERDNSRRMLSDREREMAEIRD 352
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 353 QMQQQLSDYEQLLDVKLALDMEISAYRKLLEGEEERL 389
>gi|281353726|gb|EFB29310.1| hypothetical protein PANDA_006526 [Ailuropoda melanoleuca]
Length = 495
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVTV
Sbjct: 398 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTV 456
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 457 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 495
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 250 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKERDNSRRMLSDKEREMAEIRD 309
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 310 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 346
>gi|392341331|ref|XP_001076027.3| PREDICTED: lamin-B2-like [Rattus norvegicus]
gi|392349219|ref|XP_216850.6| PREDICTED: lamin-B2-like [Rattus norvegicus]
Length = 616
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+ A G + I EVD +G+FV+L N ++QSLGNW++ ++V ++KF + AG
Sbjct: 464 AGATGVVNIDEVDLEGRFVRLKNSSDKDQSLGNWRIKKQVLEGEDIAYKFTPKYVLRAGQ 523
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
TVTVW+ GATH PP +V KNQ +GSG+ T+L+N DGE
Sbjct: 524 TVTVWAAGA-GATHSPPSTLVWKNQSSWGSGENFRTVLVNADGE 566
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
Query: 171 GELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIE 230
+L N + I D K + ELKE + R +++ L+ + +ELE+ +
Sbjct: 280 AKLDNTKLISDQNDKAARAAREELKEARMRVESLSYQLSGLQKQASAAEDHIRELEEALA 339
Query: 231 YEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E+ KF M E E+ ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 340 GERDKFRNMLDAKEQEMAEVRDAMQQQLAEYQELLDIKLALDMEICSYRKLLEGEEERL 398
>gi|52869|emb|CAA34677.1| unnamed protein product [Mus musculus]
Length = 588
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVTV
Sbjct: 441 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTV 499
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 500 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 538
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 293 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDMLAKERDNSRRMLSDREREMAEIRD 352
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 353 QMQQQLSDYEQLLDVKLALDMEISAYRKLLEGEEERL 389
>gi|149034473|gb|EDL89210.1| similar to Lmnb2 protein (predicted) [Rattus norvegicus]
Length = 504
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+ A G + I EVD +G+FV+L N ++QSLGNW++ ++V ++KF + AG
Sbjct: 352 AGATGVVNIDEVDLEGRFVRLKNSSDKDQSLGNWRIKKQVLEGEDIAYKFTPKYVLRAGQ 411
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
TVTVW+ GATH PP +V KNQ +GSG+ T+L+N DGE
Sbjct: 412 TVTVWAAGA-GATHSPPSTLVWKNQSSWGSGENFRTVLVNADGE 454
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
Query: 171 GELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIE 230
+L N + I D K + ELKE + R +++ L+ + +ELE+ +
Sbjct: 168 AKLDNTKLISDQNDKAARAAREELKEARMRVESLSYQLSGLQKQASAAEDHIRELEEALA 227
Query: 231 YEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E+ KF M E E+ ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 228 GERDKFRNMLDAKEQEMAEVRDAMQQQLAEYQELLDIKLALDMEICSYRKLLEGEEERL 286
>gi|220472|dbj|BAA02708.1| lamin B3 [Mus musculus]
gi|74209997|dbj|BAE21293.1| unnamed protein product [Mus musculus]
Length = 474
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 23/143 (16%)
Query: 33 VAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVT--SSAKGNMEITEVDPDGKFVKL 90
+G+PSR S R SSG ++ + A G + I EVDP+G+FV+L
Sbjct: 302 TSGSPSRAS-------------------RVSSGSRLAQQTVATGVVNIDEVDPEGRFVRL 342
Query: 91 YNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIV 150
N ++QSLGNW++ R+V ++KF + AG TVTVW+ GATH PP +V
Sbjct: 343 KNSSDKDQSLGNWRIKRQVLEGEDIAYKFTPKYVLRAGQTVTVWAAGA-GATHSPPSTLV 401
Query: 151 MKNQ-KFGSGDEISTILLNTDGE 172
K+Q +G G+ T L++ DGE
Sbjct: 402 WKSQTNWGPGESFRTALVSADGE 424
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 224 ELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLME 279
ELE+ + E+ KF +M E E+ ++ M +QL +Y+EL++IK+ LD+EI+ YR L+E
Sbjct: 193 ELEEALAGERDKFRKMLDAKEQEMTEVRDAMQQQLAEYQELLDIKLALDMEISAYRKLLE 252
Query: 280 AEESSL 285
EE L
Sbjct: 253 GEEERL 258
>gi|73960920|ref|XP_864434.1| PREDICTED: prelamin-A/C isoform 4 [Canis lupus familiaris]
Length = 665
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 84/151 (55%), Gaps = 18/151 (11%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYES----EERTSSGFQVTSSAKGNMEITEVD 82
G SS + T GS+ +KKRKL E S RTS G + + EVD
Sbjct: 400 GRASSHSSQTQGTGSI--TKKRKLESSESRSSSFSQHARTS----------GRVAVEEVD 447
Query: 83 PDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGAT 142
+GKFV+L NK SE+QS+GNWQ+ R+ + +++F ++AG VT+W+ GAT
Sbjct: 448 EEGKFVRLRNKSSEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GAT 506
Query: 143 HEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
H PP ++V K Q +G G+ + T L+N+ GE
Sbjct: 507 HSPPTDLVWKAQNTWGCGNSLRTALINSTGE 537
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 67/117 (57%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ E E+ ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLADKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|291387267|ref|XP_002710222.1| PREDICTED: lamin B1 [Oryctolagus cuniculus]
Length = 587
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 440 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 498
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 499 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 537
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ R+ E E+ ++
Sbjct: 292 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKERDNSRRLLSDKEREMAEIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|296485609|tpg|DAA27724.1| TPA: lamin B1 [Bos taurus]
Length = 547
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 440 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 498
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 499 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 537
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 292 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKERDNSRRMLSDKEREMAEIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|281347289|gb|EFB22873.1| hypothetical protein PANDA_015544 [Ailuropoda melanoleuca]
Length = 526
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 70/113 (61%), Gaps = 4/113 (3%)
Query: 63 SSGFQVT--SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFH 120
S+ F + +SA G + I E+D +G+FV+L N ++QSLGNW++ R+V + ++KF
Sbjct: 378 STSFHLAQQASASGGVSIEEIDLEGRFVQLKNSSDKDQSLGNWRIKRQVLEGEEIAYKFT 437
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+ AG TVTVW+ G H PP +V K+Q +G+G+ T+LLN DGE
Sbjct: 438 PKYVLRAGQTVTVWAAGA-GVVHSPPSTLVWKSQNSWGTGESFRTVLLNADGE 489
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 266 ELKEARMRLESLSYQLSGLQKQASAAEDRIRELEETMAGERDKFRKMLDAKEQEMTEMRD 325
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLME 279
M +QL +Y+EL+++K+ LD+EI+ YR L+E
Sbjct: 326 VMQQQLAEYQELLDVKLALDMEISAYRKLLE 356
>gi|440912966|gb|ELR62482.1| Lamin-B1, partial [Bos grunniens mutus]
Length = 530
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 384 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 442
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 443 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 481
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 236 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKERDNSRRMLSDKEREMAEIRD 295
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 296 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 332
>gi|355691559|gb|EHH26744.1| hypothetical protein EGK_16800, partial [Macaca mulatta]
Length = 538
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 392 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 450
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 451 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 489
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 244 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDMLAKEKDNSRRMLTDKEREMAEIRD 303
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 304 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 340
>gi|301765406|ref|XP_002918129.1| PREDICTED: lamin-B1-like [Ailuropoda melanoleuca]
Length = 616
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVTV
Sbjct: 470 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTV 528
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 529 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 567
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 322 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKERDNSRRMLSDKEREMAEIRD 381
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 382 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 418
>gi|426349804|ref|XP_004042476.1| PREDICTED: lamin-B1 isoform 1 [Gorilla gorilla gorilla]
Length = 586
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 440 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 498
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 499 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 537
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 292 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKEKDNSRRMLTDKEREMAEIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|149064296|gb|EDM14499.1| rCG46767, isoform CRA_c [Rattus norvegicus]
Length = 587
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVTV
Sbjct: 440 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTV 498
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ +L N+ GE
Sbjct: 499 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVVLKNSQGE 537
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 292 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDMLAKERDNSRRMLSDKEREMAEIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|5031877|ref|NP_005564.1| lamin-B1 isoform 1 [Homo sapiens]
gi|125953|sp|P20700.2|LMNB1_HUMAN RecName: Full=Lamin-B1; Flags: Precursor
gi|307106|gb|AAA36162.1| lamin B [Homo sapiens]
gi|576840|gb|AAC37575.1| lamin B1 [Homo sapiens]
gi|74354337|gb|AAI03724.1| Lamin B1 [Homo sapiens]
gi|119569231|gb|EAW48846.1| lamin B1, isoform CRA_b [Homo sapiens]
gi|189069155|dbj|BAG35493.1| unnamed protein product [Homo sapiens]
gi|261858378|dbj|BAI45711.1| lamin B1 [synthetic construct]
Length = 586
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 440 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 498
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 499 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 537
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 292 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKEKDNSRRMLTDKEREMAEIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|355699524|gb|AES01156.1| lamin B1 [Mustela putorius furo]
Length = 466
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 321 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 379
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 380 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 418
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 173 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKERDNSRRMLSDKEREMAEIRD 232
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 233 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 269
>gi|335283403|ref|XP_003123930.2| PREDICTED: lamin-B1 [Sus scrofa]
Length = 586
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 440 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 498
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 499 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 537
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 292 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKERDNSRRMLSDKEREMAEIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|431922255|gb|ELK19346.1| Lamin-B2 [Pteropus alecto]
Length = 551
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 71/110 (64%), Gaps = 4/110 (3%)
Query: 66 FQVT--SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTL 123
FQ+ +SA G++ I E+D +G+FV+L N ++QSLGNW++ R++ + ++KF
Sbjct: 392 FQLAQQASASGSVSIEEIDLEGRFVQLKNSSDKDQSLGNWRIKRQILEGEEIAYKFTPKY 451
Query: 124 KIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
+ AG TVTVW+ G H PP +V K+Q+ +G+G+ T+L+N DGE
Sbjct: 452 VLRAGQTVTVWAAGA-GVAHSPPSTLVWKSQRSWGTGESFRTVLVNADGE 500
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 4/58 (6%)
Query: 232 EQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E+ KF +M E E+ ++ M +QL +Y+EL++IK+ LD+EI+ YR L+E EE L
Sbjct: 277 ERDKFRKMLDAKEREMTEMRDVMQQQLAEYQELLDIKLALDMEISAYRKLLEGEEERL 334
>gi|332821824|ref|XP_001158070.2| PREDICTED: lamin-B1 isoform 1 [Pan troglodytes]
gi|397512803|ref|XP_003826726.1| PREDICTED: lamin-B1 [Pan paniscus]
gi|410221384|gb|JAA07911.1| lamin B1 [Pan troglodytes]
gi|410258478|gb|JAA17206.1| lamin B1 [Pan troglodytes]
gi|410298726|gb|JAA27963.1| lamin B1 [Pan troglodytes]
gi|410334687|gb|JAA36290.1| lamin B1 [Pan troglodytes]
Length = 586
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 440 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 498
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 499 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 537
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 292 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKEKDNSRRMLTDKEREMAEIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|14290259|gb|AAK59326.1|AF381029_1 lamin Adel10 [Homo sapiens]
Length = 260
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL ES E SS F + G + + EVD +GK
Sbjct: 26 GRASSHSSQTQGGGSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGK 76
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP
Sbjct: 77 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPP 135
Query: 147 HNIVMKNQK-FGSGDEISTILLNTDGE 172
++V K Q +G G+ + T L+N+ GE
Sbjct: 136 TDLVWKAQNTWGCGNSLRTALINSTGE 162
>gi|15126742|gb|AAH12295.1| Lamin B1 [Homo sapiens]
gi|123981378|gb|ABM82518.1| lamin B1 [synthetic construct]
gi|157928174|gb|ABW03383.1| lamin B1 [synthetic construct]
Length = 586
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 440 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 498
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 499 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 537
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 292 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKEKDNSRRMLTDKEREMAEIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L++ EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLQGEEERL 388
>gi|296193836|ref|XP_002744688.1| PREDICTED: lamin-B1 [Callithrix jacchus]
Length = 587
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 440 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 498
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 499 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 537
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 292 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKEKDNSRRMLSDKEREMAEIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|157074106|ref|NP_001096765.1| lamin-B1 [Bos taurus]
gi|154425605|gb|AAI51305.1| LMNB1 protein [Bos taurus]
Length = 586
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 440 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 498
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 499 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 537
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 292 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKERDNSRRMLSDKEREMAEIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|386780760|ref|NP_001247777.1| lamin-B1 [Macaca mulatta]
gi|402872393|ref|XP_003900101.1| PREDICTED: lamin-B1 [Papio anubis]
gi|383409681|gb|AFH28054.1| lamin-B1 isoform 1 [Macaca mulatta]
gi|387540388|gb|AFJ70821.1| lamin-B1 isoform 1 [Macaca mulatta]
Length = 586
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 440 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 498
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 499 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 537
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 292 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDMLAKEKDNSRRMLTDKEREMAEIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|345777955|ref|XP_531892.3| PREDICTED: lamin-B1 [Canis lupus familiaris]
Length = 454
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 308 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 366
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 367 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 405
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 160 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKERDNSRRMLSDKEREMAEIRD 219
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 220 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 256
>gi|297675879|ref|XP_002815878.1| PREDICTED: lamin-B1 [Pongo abelii]
Length = 586
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 440 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 498
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 499 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 537
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 292 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKEKDNSRRMLTDKEREMAEIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|432101679|gb|ELK29709.1| Lamin-B1 [Myotis davidii]
Length = 520
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 329 GNICIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 387
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 388 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILRNSQGE 426
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 181 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKERDNSRRMLSDKEREMAEIRD 240
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 241 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 277
>gi|426229265|ref|XP_004008711.1| PREDICTED: lamin-B1 [Ovis aries]
Length = 586
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 440 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 498
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 499 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 537
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 292 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKERDNSRRMLSDKEREMAEIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|45384202|ref|NP_990616.1| lamin-B2 [Gallus gallus]
gi|125956|sp|P14732.1|LMNB2_CHICK RecName: Full=Lamin-B2; Flags: Precursor
gi|63560|emb|CAA34763.1| unnamed protein product [Gallus gallus]
Length = 600
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 72/110 (65%), Gaps = 4/110 (3%)
Query: 66 FQVT--SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTL 123
FQ++ +SA G++ I E+D +GK+V+L N ++QSLGNW+L R++ + ++KF
Sbjct: 445 FQMSQQASATGSISIEEIDLEGKYVQLKNNSEKDQSLGNWRLKRQIGDGEEIAYKFTPKY 504
Query: 124 KIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+ AG TVT+W + G +H PP +V KNQ +G+G I T L+N+DGE
Sbjct: 505 VLRAGQTVTIWGADA-GVSHSPPSVLVWKNQGSWGTGGNIRTYLVNSDGE 553
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +EL++ + E+ KF +M E E+ ++
Sbjct: 285 ELKEARMRIESLSHQLSGLQKQASATEDRIRELKETMAGERDKFRKMLDAKEREMTEMRD 344
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M QL +Y+EL+++K+ LD+EI+ YR L+E EE L
Sbjct: 345 QMQLQLTEYQELLDVKLALDMEISAYRKLLEGEEERL 381
>gi|348583008|ref|XP_003477267.1| PREDICTED: lamin-B1 [Cavia porcellus]
Length = 472
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 326 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTAVSYKYTSRYVLKAGQTVTI 384
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 385 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILRNSQGE 423
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 178 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKERDNSRRMLTDKEREMAEIRD 237
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 238 QMQQQLSDYEQLLDVKLALDMEISAYRKLLEGEEERL 274
>gi|16758782|ref|NP_446357.1| lamin-B1 [Rattus norvegicus]
gi|17865475|sp|P70615.3|LMNB1_RAT RecName: Full=Lamin-B1; Flags: Precursor
gi|1575794|gb|AAB09600.1| lamin B1 [Rattus norvegicus]
Length = 587
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVTV
Sbjct: 440 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTV 498
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ +L N+ GE
Sbjct: 499 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVVLKNSQGE 537
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 4/96 (4%)
Query: 194 LKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQTE 249
+ E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++ +
Sbjct: 293 MMESRMRIESLSSQLSNLQKDSRACLERIQELEDMLAKERDNSRRMLSDKEREMAEIRDQ 352
Query: 250 MTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 353 MQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|149726917|ref|XP_001503253.1| PREDICTED: lamin-B1 [Equus caballus]
Length = 557
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 411 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 469
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 470 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 508
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELE+ + E+ RM E E+ ++
Sbjct: 263 ELMESRMRIESLSSQLSNLQKESRACLERIQELEELLAKERDNSRRMLTDKEREMAEIRD 322
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 323 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 359
>gi|45384220|ref|NP_990617.1| lamin-B1 [Gallus gallus]
gi|125952|sp|P14731.1|LMNB1_CHICK RecName: Full=Lamin-B1; Flags: Precursor
gi|63558|emb|CAA34761.1| unnamed protein product [Gallus gallus]
Length = 584
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+++ ++AG TVT+
Sbjct: 439 GNISIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSASYRYTSRYVLKAGQTVTI 497
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ +L N+ GE
Sbjct: 498 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVVLKNSQGE 536
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R + + +++ + +R ELED + E+ + ++ E E+ ++
Sbjct: 291 ELHESRMRIETLSSHIADIQKESRAWQDRVHELEDTLSKERENYRKILAENEREVAEMRN 350
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +Q DY +L+++K+ LD+EI+ YR L+E+EE L
Sbjct: 351 QMQQQFSDYEQLLDVKLALDMEISAYRKLLESEEERL 387
>gi|395845167|ref|XP_003795314.1| PREDICTED: prelamin-A/C [Otolemur garnettii]
Length = 664
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 84/150 (56%), Gaps = 17/150 (11%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYES---EERTSSGFQVTSSAKGNMEITEVDP 83
G SS + T GSV +KKRKL E S RTS G + + EVD
Sbjct: 400 GRASSHSSQTQGGGSV--TKKRKLESSESRSSFSQHARTS----------GRVAVEEVDE 447
Query: 84 DGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATH 143
+GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH
Sbjct: 448 EGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQAVTIWAAGA-GATH 506
Query: 144 EPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
PP ++V K Q +G G+ + T L+N+ GE
Sbjct: 507 SPPTDLVWKAQNTWGCGNSLRTALINSTGE 536
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL++T+ R ++++L+ + ++LED + E+ R+ E E+ ++
Sbjct: 291 ELQQTRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARERDTSRRLLADKEREMAEMRA 350
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 351 RMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|395817655|ref|XP_003782279.1| PREDICTED: lamin-B1 [Otolemur garnettii]
Length = 746
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 600 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 658
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 659 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILRNSQGE 697
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 452 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKERDNSRRMLSDKEREMAEIRD 511
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 512 QMQQQLSDYEQLLDVKLALDMEISAYRKLLEGEEERL 548
>gi|293689|gb|AAC96023.1| lamin B [Mus musculus]
Length = 587
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVTV
Sbjct: 441 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTV 499
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ +L N+ GE
Sbjct: 500 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVMLKNSQGE 538
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 293 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDMLAKERDNSRRMLSDREREMAEIRD 352
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 353 QMQQQLSDYEQLLDVKLALDMEISAYRKLLEGEEERL 389
>gi|403274088|ref|XP_003928821.1| PREDICTED: lamin-B2 [Saimiri boliviensis boliviensis]
Length = 566
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 25/155 (16%)
Query: 36 TPSRGSVAPSKKRKLNILEEYESEERTSSGFQV-----------------TSSAKGNMEI 78
TP+ G + SK+++L + EE SG V +SA G++ I
Sbjct: 369 TPATGRLGRSKRKRLEV------EEPLGSGPSVLGTGVGTGGSSSFHLAQQASASGSVSI 422
Query: 79 TEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNV 138
E+D +GKFV+L N ++QSLGNW++ R++ + ++KF + AG VTVW+
Sbjct: 423 EEIDLEGKFVQLKNNSDKDQSLGNWRIKRQILEGEEIAYKFTPKYVLRAGQMVTVWAAGA 482
Query: 139 EGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
G H PP +V K Q +G+G+ T+L+N DGE
Sbjct: 483 -GVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGE 516
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 247 ELKEARMRLESLSFQLSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRD 306
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI+ YR L+E EE L
Sbjct: 307 VMQQQLAEYQELLDVKLALDMEISAYRKLLEGEEERL 343
>gi|338726544|ref|XP_001915846.2| PREDICTED: lamin-B2-like [Equus caballus]
Length = 537
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +GKFV+L N ++QSLGNW++ R++ + ++KF + AG
Sbjct: 384 ASASGSVSIEEIDLEGKFVRLKNSSDKDQSLGNWRIKRQILEGEEIAYKFTPKYVLRAGQ 443
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
TVTVW+ G H PP +V K+Q +G+G+ + IL+N DGE
Sbjct: 444 TVTVWAAGA-GVAHSPPSTLVWKSQNSWGTGESLRAILVNADGE 486
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 171 GELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIE 230
+L N + I D K S+ ELKE R +++ L+ +R +ELE+ +
Sbjct: 199 AKLDNAKLISDQNDKAASAAREELKEALMRVESLSYQLSGLQKQASAAEDRIRELEETMA 258
Query: 231 YEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E+ KF ++ E E+ ++ M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 259 GERDKFRKLLDAKEREMTEMREVMQQQLAEYQELLDVKLALDMEINAYRKLLEGEEERL 317
>gi|310689049|ref|NP_001185486.1| lamin-B1 isoform 2 [Homo sapiens]
gi|410039641|ref|XP_003950660.1| PREDICTED: lamin-B1 [Pan troglodytes]
gi|426349806|ref|XP_004042477.1| PREDICTED: lamin-B1 isoform 2 [Gorilla gorilla gorilla]
Length = 376
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 230 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 288
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 289 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 327
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 82 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKEKDNSRRMLTDKEREMAEIRD 141
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 142 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 178
>gi|395831353|ref|XP_003788767.1| PREDICTED: lamin-B2 [Otolemur garnettii]
Length = 605
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I EVD +GKFV+L N ++QSLGNW++ R++ + ++KF + AG
Sbjct: 452 ASASGSVTIEEVDLEGKFVQLKNNSDKDQSLGNWRIKRQILEGDEIAYKFTPKYILRAGQ 511
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
TVTVW+ G H PP +V K+Q +G+G+ T+L+N DGE
Sbjct: 512 TVTVWAAGA-GVAHSPPSTLVWKSQNSWGAGESFRTVLVNADGE 554
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 286 ELKEARMRVESLSYQLSNLQKQASAAEDRIRELEEAMTGERDKFRKMLDAKEQEMTEMRD 345
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI+ YR L+E EE L
Sbjct: 346 VMQQQLAEYQELLDVKLALDMEISAYRKLLEGEEERL 382
>gi|380798661|gb|AFE71206.1| lamin-B1 isoform 2, partial [Macaca mulatta]
Length = 367
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 221 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 279
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 280 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 318
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 73 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDMLAKEKDNSRRMLTDKEREMAEIRD 132
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 133 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 169
>gi|301781086|ref|XP_002925963.1| PREDICTED: lamin-B2-like [Ailuropoda melanoleuca]
Length = 545
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G + I E+D +G+FV+L N ++QSLGNW++ R+V + ++KF + AG
Sbjct: 393 ASASGGVSIEEIDLEGRFVQLKNSSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYVLRAGQ 452
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
TVTVW+ G H PP +V K+Q +G+G+ T+LLN DGE
Sbjct: 453 TVTVWAAGA-GVVHSPPSTLVWKSQNSWGTGESFRTVLLNADGE 495
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 285 ELKEARMRLESLSYQLSGLQKQASAAEDRIRELEETMAGERDKFRKMLDAKEQEMTEMRD 344
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLME 279
M +QL +Y+EL+++K+ LD+EI+ YR L+E
Sbjct: 345 VMQQQLAEYQELLDVKLALDMEISAYRKLLE 375
>gi|326934250|ref|XP_003213205.1| PREDICTED: lamin-B2-like [Meleagris gallopavo]
Length = 660
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 72/110 (65%), Gaps = 4/110 (3%)
Query: 66 FQVT--SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTL 123
FQ++ +SA G++ I E+D +GK+V+L N ++QSLGNW+L R++ + ++KF
Sbjct: 505 FQMSQQASATGSISIEEIDLEGKYVQLKNNSEKDQSLGNWRLKRQIGDGEEIAYKFTPKY 564
Query: 124 KIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+ AG TVT+W + G +H PP +V KNQ +G+G I T L+N+DGE
Sbjct: 565 VLRAGQTVTIWGADA-GVSHSPPSVLVWKNQGSWGTGGNIRTYLVNSDGE 613
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 345 ELKEARMRIESLSYQLSGLQKQASAAEDRIRELEETMAGERDKFRKMLDAKEREMTEMRD 404
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M QL +Y+EL+++K+ LD+EI+ YR L+E EE L
Sbjct: 405 QMQLQLTEYQELLDVKLALDMEISAYRKLLEGEEERL 441
>gi|194381652|dbj|BAG64195.1| unnamed protein product [Homo sapiens]
Length = 376
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 230 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 288
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 289 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 327
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 82 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKEKDNSRRMLTDKEREMAEIRD 141
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 142 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 178
>gi|403256636|ref|XP_003920971.1| PREDICTED: lamin-B1 [Saimiri boliviensis boliviensis]
Length = 478
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 332 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 390
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 391 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 429
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
Query: 204 YDTEMNELRAANYRLT-ERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYR 258
Y E+ + A R ER +ELED + E+ RM E E+ ++ +M +QL DY
Sbjct: 194 YKEELEQTYHAKSRACLERIQELEDLLAKEKDNSRRMLTDKEREMAEIRDQMQQQLNDYE 253
Query: 259 ELMEIKINLDVEIAQYRNLMEAEESSL 285
+L+++K+ LD+EI+ YR L+E EE L
Sbjct: 254 QLLDVKLALDMEISAYRKLLEGEEERL 280
>gi|351699961|gb|EHB02880.1| Lamin-B1, partial [Heterocephalus glaber]
Length = 471
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ ++K+ ++AG TVT+
Sbjct: 325 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVTYKYTSRYVLKAGQTVTI 383
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 384 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 422
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 177 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKERDNSRRMLTDKEREMAEIRD 236
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 237 QMQQQLSDYEQLLDVKLALDMEISAYRKLLEGEEERL 273
>gi|343959446|dbj|BAK63580.1| lamin-B1 [Pan troglodytes]
Length = 586
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 66/100 (66%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W++ RK+ G+ S+K+ ++AG TVT+
Sbjct: 440 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMTRKI-GDTSVSYKYTSRYVLKAGQTVTI 498
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 499 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 537
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 292 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKEKDNSRRMLTDKEREMAEIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|335282347|ref|XP_003354039.1| PREDICTED: lamin-B2 [Sus scrofa]
Length = 604
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +GKFV+L N ++QSLGNW++ R+V + ++KF + AG
Sbjct: 451 ASASGSISIEEIDLEGKFVQLKNSSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYVLRAGQ 510
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
TVTVW+ G H PP +V K+Q +G+G T+L+N DGE
Sbjct: 511 TVTVWAAGA-GVAHSPPSTLVWKSQNSWGTGGSFRTVLVNADGE 553
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 286 ELKEARMRLESLSYQLSSLQKQASAAEDRIRELEETMAGERDKFRKMLDAKEREMTEMRD 345
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 346 VMQQQLAEYQELLDVKLALDMEINAYRKLLEGEEERL 382
>gi|431908006|gb|ELK11613.1| Lamin-B1 [Pteropus alecto]
Length = 576
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ ++K+ ++AG TVT+
Sbjct: 440 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVTYKYTSRYVLKAGQTVTI 498
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 499 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 537
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 292 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKERDNSRRMLSDKEREMAEIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|3414963|gb|AAC31543.1| lamin B1 [Xenopus laevis]
Length = 584
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 68/105 (64%), Gaps = 3/105 (2%)
Query: 69 TSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAG 128
++SA G++ I EVD +GK+++L N ++Q LG W+L R + GE +FKF ++AG
Sbjct: 435 SASATGDVSIEEVDMEGKYIRLKNNSEKDQPLGGWELTRTI-GEASVNFKFTSRYVLKAG 493
Query: 129 GTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
TVT+W+ + G T PP N++ KNQ +G+G+++ L N+ GE
Sbjct: 494 QTVTIWAADA-GVTASPPSNLIWKNQNSWGTGEDVKATLKNSQGE 537
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKR----LQT 248
EL E++ R ++++EL+ + +R +ELED + E+ +M AE +R ++
Sbjct: 292 ELTESRLRINSLTSQLSELQKESRAWHDRMQELEDMLAKEKDNSRKMLAEREREMADIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|74220666|dbj|BAE31539.1| unnamed protein product [Mus musculus]
Length = 642
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 506 GRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 565
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
W+ GATH PP ++V K Q +G G + T L+N+ GE +++ +L
Sbjct: 566 WASGA-GATHSPPTDLVWKAQNTWGCGSSLRTALINSTGEEVAMRKLVRSL 615
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 339 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 398
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 399 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 455
>gi|332221605|ref|XP_003259953.1| PREDICTED: lamin-B1 [Nomascus leucogenys]
Length = 587
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I ++D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 440 GNVCIEKIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDASVSYKYTSRYVLKAGQTVTI 498
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 499 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 537
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 292 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKEKDNSRRMLTDKEREMAEIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|440912168|gb|ELR61760.1| Lamin-B2, partial [Bos grunniens mutus]
Length = 568
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +G+FV+L N ++QSLGNW++ R+V + S+KF + AG
Sbjct: 415 ASASGSVSIEEIDLEGRFVQLKNSSDKDQSLGNWRIKRQVLEGEEISYKFTPKYVLRAGQ 474
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
TVTVW+ G H PP +V K+Q +G+G+ T L+N DGE
Sbjct: 475 TVTVWAAGA-GVAHSPPSTLVWKSQNSWGTGESFRTTLVNADGE 517
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 250 ELKEARMRVESLSYQLSSLQKQASAAEDRIRELEETVAGERDKFRKMLDAKEREMMEVRD 309
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI+ YR L+E EE L
Sbjct: 310 MMQQQLAEYQELLDVKLALDMEISAYRKLLEGEEERL 346
>gi|432116910|gb|ELK37497.1| Lamin-B2 [Myotis davidii]
Length = 588
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +GKFV+L N ++QSLGNW++ R+V + ++KF + AG
Sbjct: 435 ASASGSVSIEEIDLEGKFVQLKNSSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYVLRAGQ 494
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
TVTVW+ G H PP +V K+Q +G+G T+L+N DGE
Sbjct: 495 TVTVWAAGA-GVAHSPPSTLVWKSQNSWGTGGSFRTVLVNADGE 537
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 171 GELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIE 230
+L N + D K S+ ELKE + R +++ L+ +R +ELE+ +
Sbjct: 249 AKLDNAKLCSDQNDKAASAAREELKEARMRVESLSYQLSSLQKQASAAEDRIRELEEAMA 308
Query: 231 YEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E+ +F +M E E+ ++ M +QL +Y+EL+++K+ LD+EI+ YR L+E EE L
Sbjct: 309 GERDRFRKMLDAKELEMTEMRDVMQQQLAEYQELLDVKLALDMEISAYRKLLEGEEERL 367
>gi|444741701|ref|NP_001263282.1| lamin-B2 [Bos taurus]
gi|297476855|ref|XP_002688997.1| PREDICTED: lamin-B2 [Bos taurus]
gi|296485637|tpg|DAA27752.1| TPA: lamin B2 [Bos taurus]
Length = 628
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +G+FV+L N ++QSLGNW++ R+V + S+KF + AG
Sbjct: 475 ASASGSVSIEEIDLEGRFVQLKNSSDKDQSLGNWRIKRQVLEGEEISYKFTPKYVLRAGQ 534
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
TVTVW+ G H PP +V K+Q +G+G+ T L+N DGE
Sbjct: 535 TVTVWAAGA-GVAHSPPSTLVWKSQNSWGTGESFRTTLVNADGE 577
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 310 ELKEARMRVESLSYQLSSLQKQASAAEDRIRELEETVAGERDKFRKMLDAKEREMMEVRD 369
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI+ YR L+E EE L
Sbjct: 370 MMQQQLAEYQELLDVKLALDMEISAYRKLLEGEEERL 406
>gi|74219492|dbj|BAE29519.1| unnamed protein product [Mus musculus]
Length = 574
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 438 GRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 497
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
W+ GATH PP ++V K Q +G G + T L+N+ GE +++ +L
Sbjct: 498 WASGA-GATHSPPTDLVWKAQNTWGCGSSLRTALINSTGEEVAMRKLVRSL 547
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>gi|410948108|ref|XP_003980783.1| PREDICTED: lamin-B1 [Felis catus]
Length = 732
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 586 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 644
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGELANQERII 180
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE Q +
Sbjct: 645 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGEEVAQRSTV 691
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 438 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKERDNSRRMLSDKEREMAEIRD 497
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 498 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 534
>gi|12835914|dbj|BAB23415.1| unnamed protein product [Mus musculus]
Length = 665
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 438 GRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 497
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
W+ GATH PP ++V K Q +G G + T L+N+ GE +++ +L
Sbjct: 498 WASGA-GATHSPPTDLVWKAQNTWGCGSSLRTALINSTGEEVAMRKLVRSL 547
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|224087202|ref|XP_002189120.1| PREDICTED: lamin-B2 [Taeniopygia guttata]
Length = 612
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 72/110 (65%), Gaps = 4/110 (3%)
Query: 66 FQVT--SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTL 123
FQ++ +SA G++ I E+D +GK+V+L N ++QSLGNW+L R++ + ++KF
Sbjct: 457 FQMSQQASATGSISIEEIDLEGKYVQLKNNSEKDQSLGNWRLKRQIGDGDEIAYKFTPKY 516
Query: 124 KIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+ AG TVT+W + G +H PP +V KNQ +G+G I T L+N++GE
Sbjct: 517 VLRAGQTVTIWGADA-GVSHSPPSVLVWKNQGSWGTGGNIRTYLVNSEGE 565
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 297 ELKEARMRIEALSYQLSGLQKQASAAEDRIRELEEIMAGEREKFRKMLDAKEREMTDMRD 356
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M QL +Y+EL+++K+ LD+EI+ YR L+E EE L
Sbjct: 357 QMQLQLTEYQELLDVKLALDMEISAYRKLLEGEEERL 393
>gi|161760667|ref|NP_001104572.1| prelamin-A/C isoform C [Mus musculus]
gi|1794160|dbj|BAA08570.1| lamin C [Mus musculus domesticus]
gi|74151854|dbj|BAE29714.1| unnamed protein product [Mus musculus]
gi|74211746|dbj|BAE29226.1| unnamed protein product [Mus musculus]
gi|74220230|dbj|BAE31294.1| unnamed protein product [Mus musculus]
gi|112378773|gb|ABI16252.1| lamin C [Mus musculus]
Length = 574
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 438 GRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 497
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
W+ GATH PP ++V K Q +G G + T L+N+ GE +++ +L
Sbjct: 498 WASGA-GATHSPPTDLVWKAQNTWGCGSSLRTALINSTGEEVAMRKLVRSL 547
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>gi|162287370|ref|NP_001002011.2| prelamin-A/C isoform A [Mus musculus]
gi|85700428|sp|P48678.2|LMNA_MOUSE RecName: Full=Prelamin-A/C; Contains: RecName: Full=Lamin-A/C;
Flags: Precursor
gi|1794159|dbj|BAA08569.1| lamin A [Mus musculus domesticus]
gi|15929761|gb|AAH15302.1| Lamin A [Mus musculus]
gi|62739248|gb|AAH94020.1| Lamin A [Mus musculus]
gi|74151192|dbj|BAE27717.1| unnamed protein product [Mus musculus]
gi|112378771|gb|ABI16251.1| lamin A [Mus musculus]
gi|148683328|gb|EDL15275.1| lamin A, isoform CRA_a [Mus musculus]
Length = 665
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 438 GRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 497
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
W+ GATH PP ++V K Q +G G + T L+N+ GE +++ +L
Sbjct: 498 WASGA-GATHSPPTDLVWKAQNTWGCGSSLRTALINSTGEEVAMRKLVRSL 547
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|74204231|dbj|BAE39876.1| unnamed protein product [Mus musculus]
Length = 574
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 438 GRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 497
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
W+ GATH PP ++V K Q +G G + T L+N+ GE +++ +L
Sbjct: 498 WASGA-GATHSPPTDLVWKAQNTWGCGSSLRTALINSTGEEVAMRKLVRSL 547
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>gi|74219697|dbj|BAE29614.1| unnamed protein product [Mus musculus]
Length = 574
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 438 GRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 497
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
W+ GATH PP ++V K Q +G G + T L+N+ GE +++ +L
Sbjct: 498 WASGA-GATHSPPTDLVWKAQNTWGCGSSLRTALINSTGEEVAMRKLVRSL 547
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 223 KELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ E E+ ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDSLARERDTSRRLLAGKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>gi|332255880|ref|XP_003277054.1| PREDICTED: lamin-B2 [Nomascus leucogenys]
Length = 616
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA GN+ I E+D +GKFV+L N ++QSLGNW++ R++ + ++KF + AG
Sbjct: 464 ASASGNVSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQILEGEEIAYKFTPKYVLRAGQ 523
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
VTVW+ G H PP +V K Q +G+G+ T+L+N DGE
Sbjct: 524 MVTVWAAGA-GVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGE 566
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 302 ELKEARMRLESLSYQLSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRD 361
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 362 VMQQQLAEYQELLDVKLALDMEINAYRKLLEGEEERL 398
>gi|426230747|ref|XP_004023207.1| PREDICTED: LOW QUALITY PROTEIN: lamin-B2-like [Ovis aries]
Length = 661
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 88/157 (56%), Gaps = 15/157 (9%)
Query: 28 AGSSSVAGTPSRGSVAPSKKRKLNILEE---------YESEERTSSGFQVT--SSAKGNM 76
G+S++A TP G SK+++L + E S + S F + +SA G++
Sbjct: 457 GGASALAPTP--GPRGGSKRKRLEVEEPPGTGSSGLGSSSSTSSGSSFHLAQQASASGSV 514
Query: 77 EITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSF 136
I E+D +G+FV+L N ++QSLGNW++ R+V + S+KF + AG TVTVW+
Sbjct: 515 SIEEIDLEGRFVQLKNSSDKDQSLGNWRIKRQVLEGEEISYKFTPKYVLRAGQTVTVWAA 574
Query: 137 NVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
G H PP +V K+Q +G+G+ T L+N DGE
Sbjct: 575 GA-GVAHSPPSTLVWKSQNSWGTGESFRTTLVNADGE 610
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
Query: 173 LANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
L N + D K S+ ELKE + R +++ L+ +R +ELE+ + E
Sbjct: 331 LDNAKLSSDQNDKAASAAREELKEARMRVESLSYQLSGLQKQASAAEDRIRELEETVAGE 390
Query: 233 QSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
+ KF +M E E+ ++ M +QL +Y+EL+++K+ LD+EI+ YR L+E EE
Sbjct: 391 RDKFRKMLDAKEREMMEVRDMMQQQLAEYQELLDVKLALDMEISAYRKLLEGEE 444
>gi|50355947|ref|NP_001002016.1| prelamin-A/C isoform C2 [Rattus norvegicus]
gi|56551|emb|CAA47342.1| lamin A [Rattus norvegicus]
Length = 640
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 437 GRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 496
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
W+ GATH PP ++V K Q +G G + T L+N GE +++ +L
Sbjct: 497 WASGA-GATHSPPTDLVWKAQNTWGCGSSLRTALINATGEEVAMRKLVRSL 546
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 270 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 329
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 330 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 386
>gi|47550983|ref|NP_999665.1| nuclear intermediate filament protein [Strongylocentrotus
purpuratus]
gi|11386011|gb|AAG35069.1|AF320295_1 B-type nuclear lamin [Strongylocentrotus purpuratus]
gi|998562|gb|AAB34118.1| B-type nuclear lamin [Strongylocentrotus purpuratus, Peptide, 565
aa]
Length = 565
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + I E DP+G FVKL+N +Q+LG W L R V G + S+KF ++AG VTV
Sbjct: 440 GVVAIVESDPEGNFVKLHNNSDTDQALGGWHLKRSVDGGSQQSYKFTAKYVLKAGQEVTV 499
Query: 134 WSFNVEGATHEPPHNIVMKN-QKFGSGDEISTILLNTDGELANQERII 180
W+ G +H PP ++V KN + +G+GD + T LL+ GE+ +I
Sbjct: 500 WASG-SGKSHSPPKDLVYKNVESWGTGDNVETSLLDASGEIMATRTVI 546
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKFARM---EAEIKRLQTEMTEQLKDYRELME 262
+E+ +RA N L R K+LE Q+ + + E+++L+ + EQLKDY +L+
Sbjct: 320 SEITTIRAQNNALIARIKDLEKQLRQQDDHLEATTLRDKELQQLRDAVAEQLKDYDDLLN 379
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
IK++LD EI+ YR L+E EE+ L
Sbjct: 380 IKLSLDNEISTYRKLLEGEETRL 402
>gi|220474|dbj|BAA02476.1| lamin A [Mus musculus]
Length = 431
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 204 GRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 263
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
W+ GATH PP ++V K Q +G G + T L+N+ GE +++ +L
Sbjct: 264 WASGA-GATHSPPTDLVWKAQNTWGCGSSLRTALINSTGEEVAMRKLVRSL 313
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 37 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 96
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 97 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 153
>gi|449266827|gb|EMC77824.1| Lamin-B2, partial [Columba livia]
Length = 532
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 71/110 (64%), Gaps = 4/110 (3%)
Query: 66 FQVT--SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTL 123
FQ++ +SA G++ I E+D +GK+V+L N ++QSLGNW+L R++ + ++KF
Sbjct: 377 FQMSQQASATGSISIEEIDLEGKYVQLKNNSEKDQSLGNWRLKRQIGDGEEIAYKFTPKY 436
Query: 124 KIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+ AG TVT+W + G +H PP +V KNQ +G+G I T L+N +GE
Sbjct: 437 VLRAGQTVTIWGADA-GVSHSPPSVLVWKNQGSWGTGGNIRTYLVNAEGE 485
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 218 ELKEARMRIEALSYQLSGLQKQASAAEDRIRELEEMMAGEREKFRKMLDAKEREMTDMRD 277
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL +Y+EL+++K+ LD+EI+ YR L+E EE L
Sbjct: 278 QMQQQLTEYQELLDVKLALDMEISAYRKLLEGEEERL 314
>gi|149048132|gb|EDM00708.1| lamin A, isoform CRA_b [Rattus norvegicus]
Length = 665
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 438 GRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 497
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
W+ GATH PP ++V K Q +G G + T L+N GE +++ +L
Sbjct: 498 WASGA-GATHSPPTDLVWKAQNTWGCGSSLRTALINATGEEVAMRKLVRSL 547
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|149048131|gb|EDM00707.1| lamin A, isoform CRA_a [Rattus norvegicus]
Length = 574
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 438 GRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 497
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
W+ GATH PP ++V K Q +G G + T L+N GE +++ +L
Sbjct: 498 WASGA-GATHSPPTDLVWKAQNTWGCGSSLRTALINATGEEVAMRKLVRSL 547
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>gi|383110|prf||1902227A lamin A
Length = 665
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 438 GRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 497
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
W+ GATH PP ++V K Q +G G + T L+N GE +++ +L
Sbjct: 498 WASGA-GATHSPPTDLVWKAQNTWGCGSSLRTALINATGEEVAMRKLVRSL 547
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|38303891|gb|AAH62018.1| Lmna protein [Rattus norvegicus]
Length = 442
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 306 GRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 365
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
W+ GATH PP ++V K Q +G G + T L+N GE +++ +L
Sbjct: 366 WASGA-GATHSPPTDLVWKAQNTWGCGSSLRTALINATGEEVAMRKLVRSL 415
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 139 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 198
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 199 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 255
>gi|9506843|ref|NP_062263.1| prelamin-A/C isoform C2 [Mus musculus]
gi|505027|dbj|BAA03578.1| lamin C2 [Mus musculus]
gi|1794161|dbj|BAA08571.1| lamin C2 [Mus musculus domesticus]
gi|148683329|gb|EDL15276.1| lamin A, isoform CRA_b [Mus musculus]
Length = 462
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 326 GRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 385
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
W+ GATH PP ++V K Q +G G + T L+N+ GE +++ +L
Sbjct: 386 WASGA-GATHSPPTDLVWKAQNTWGCGSSLRTALINSTGEEVAMRKLVRSL 435
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 209 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 268
Query: 279 EAEESSL 285
E EE L
Sbjct: 269 EGEEERL 275
>gi|52865|emb|CAA32372.1| unnamed protein product [Mus musculus]
Length = 574
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 438 GWLAVEEVDEEGKFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 497
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
W+ GATH PP ++V K Q +G G + T L+N+ GE +++ +L
Sbjct: 498 WASGA-GATHSPPTDLVWKAQNTWGCGSSLRTALINSTGEEVAMRKLVRSL 547
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|1346413|sp|P48679.1|LMNA_RAT RecName: Full=Prelamin-A/C; Contains: RecName: Full=Lamin-A/C;
Flags: Precursor
Length = 665
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 438 GRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLMTYRFPPKFTLKAGQVVTI 497
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
W+ GATH PP ++V K Q +G G + T L+N GE +++ +L
Sbjct: 498 WASGA-GATHSPPTDLVWKAQNTWGCGTSLRTALINATGEEVAMRKLVRSL 547
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|1556433|emb|CAA67641.1| lamin C2 [Rattus norvegicus]
Length = 461
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 325 GRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 384
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
W+ GATH PP ++V K Q +G G + T L+N GE +++ +L
Sbjct: 385 WASGA-GATHSPPTDLVWKAQNTWGCGSSLRTALINATGEEVAMRKLVRSL 434
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 208 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 267
Query: 279 EAEESSL 285
E EE L
Sbjct: 268 EGEEERL 274
>gi|395513280|ref|XP_003760855.1| PREDICTED: lamin-B2 [Sarcophilus harrisii]
Length = 607
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 64/100 (64%), Gaps = 2/100 (2%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G++ I E+D +GKFV+L N ++QSLGNW+L R++ + ++KF + AG TVT+
Sbjct: 460 GSISIEEIDLEGKFVQLKNSSDKDQSLGNWRLKRQIGEGEEIAYKFTPKYVLRAGQTVTI 519
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ + G TH PP +V KNQ +G+G T L+N DGE
Sbjct: 520 WAADA-GVTHSPPSVLVWKNQSSWGTGGNFRTYLVNADGE 558
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 171 GELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIE 230
+L N + D K S+ ELKE + R +++ L+ +R +ELE+ +
Sbjct: 268 AKLENAKLCSDQNDKAASAAREELKEARMRVESLSYQLSSLQKQASAAEDRIRELEEILS 327
Query: 231 YEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E+ KF +M E E+ ++ +M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 328 GEREKFRKMLDAKEREMTEMRDQMQQQLTEYQELLDVKLALDMEINAYRKLLEGEEERL 386
>gi|345787367|ref|XP_542188.3| PREDICTED: lamin-B2 [Canis lupus familiaris]
Length = 658
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G + I E+D +G+FV+L N ++QSLGNW++ R+V + ++KF + AG
Sbjct: 505 ASASGGVSIEEIDLEGRFVQLKNSSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYVLRAGQ 564
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
TVTVW+ G H PP +V K Q +G+G+ T+L+N DGE
Sbjct: 565 TVTVWAAGA-GVAHSPPSTLVWKTQNSWGTGESFRTVLVNADGE 607
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 340 ELKEARMRLESLSYQLSGLQKQASAAEDRIRELEETMAGERDKFRKMLDAKEQEMTEMRD 399
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI+ YR L+E EE L
Sbjct: 400 VMQQQLAEYQELLDVKLALDMEISAYRKLLEGEEERL 436
>gi|149048133|gb|EDM00709.1| lamin A, isoform CRA_c [Rattus norvegicus]
Length = 462
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 326 GRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 385
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
W+ GATH PP ++V K Q +G G + T L+N GE +++ +L
Sbjct: 386 WASGA-GATHSPPTDLVWKAQNTWGCGSSLRTALINATGEEVAMRKLVRSL 435
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 209 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 268
Query: 279 EAEESSL 285
E EE L
Sbjct: 269 EGEEERL 275
>gi|453180|emb|CAA53945.1| lamin A [Rattus norvegicus]
Length = 640
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 413 GRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLMTYRFPPKFTLKAGQVVTI 472
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
W+ GATH PP ++V K Q +G G + T L+N GE +++ +L
Sbjct: 473 WASGA-GATHSPPTDLVWKAQNTWGCGTSLRTALINATGEEVAMRKLVRSL 522
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 246 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 305
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 306 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 362
>gi|147904084|ref|NP_001080053.1| lamin B1 [Xenopus laevis]
gi|27371024|gb|AAH41185.1| Lmnb1-prov protein [Xenopus laevis]
Length = 584
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 68/105 (64%), Gaps = 3/105 (2%)
Query: 69 TSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAG 128
++SA G++ I EVD +GK+++L N ++Q LG W+L R + GE +FKF ++AG
Sbjct: 435 SASATGDVSIEEVDMEGKYIRLKNNSEKDQPLGGWELTRTI-GEASVNFKFTSRYVLKAG 493
Query: 129 GTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
TVT+W+ + G T PP +++ KNQ +G+G+++ L N+ GE
Sbjct: 494 QTVTIWAADA-GVTASPPSDLIWKNQNSWGTGEDVKATLKNSQGE 537
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKR----LQT 248
EL E++ R ++++EL+ + +R +ELED + E+ +M AE +R ++
Sbjct: 292 ELTESRLRINSLTSQLSELQKESRAWHDRMQELEDMLAKEKDNSRKMLAEREREMADIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|32880115|gb|AAP88888.1| lamin B2 [synthetic construct]
gi|60653745|gb|AAX29566.1| lamin B2 [synthetic construct]
Length = 601
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +GKFV+L N ++QSLGNW++ R+V + ++KF + AG
Sbjct: 448 ASASGSVSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYILRAGQ 507
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
VTVW+ G H PP +V K Q +G+G+ T+L+N DGE
Sbjct: 508 MVTVWAAGA-GVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGE 550
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 286 ELKEARMRLESLSYQLSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRD 345
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 346 VMQQQLAEYQELLDVKLALDMEINAYRKLLEGEEERL 382
>gi|23503078|sp|Q03252.3|LMNB2_HUMAN RecName: Full=Lamin-B2; Flags: Precursor
gi|16306859|gb|AAH06551.1| Lamin B2 [Homo sapiens]
gi|30583721|gb|AAP36109.1| lamin B1 [Homo sapiens]
gi|61361812|gb|AAX42107.1| lamin B2 [synthetic construct]
gi|190690577|gb|ACE87063.1| lamin B2 protein [synthetic construct]
gi|190691939|gb|ACE87744.1| lamin B2 protein [synthetic construct]
Length = 600
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +GKFV+L N ++QSLGNW++ R+V + ++KF + AG
Sbjct: 448 ASASGSVSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYILRAGQ 507
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
VTVW+ G H PP +V K Q +G+G+ T+L+N DGE
Sbjct: 508 MVTVWAAGA-GVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGE 550
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 286 ELKEARMRLESLSYQLSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRD 345
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 346 VMQQQLAEYQELLDVKLALDMEINAYRKLLEGEEERL 382
>gi|397497220|ref|XP_003819412.1| PREDICTED: LOW QUALITY PROTEIN: lamin-B2 [Pan paniscus]
Length = 549
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +GKFV+L N ++QSLGNW++ R+V + ++KF + AG
Sbjct: 397 ASASGSVSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQVLEGEEMAYKFTPKYILRAGQ 456
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
VTVW+ G H PP +V K Q +G+G+ T+L+N DGE
Sbjct: 457 MVTVWAAGA-GVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGE 499
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 235 ELKEARMRLESLSYQLSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRD 294
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 295 VMQQQLAEYQELLDVKLALDMEINAYRKLLEGEEERL 331
>gi|410264878|gb|JAA20405.1| lamin B2 [Pan troglodytes]
Length = 620
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +GKFV+L N ++QSLGNW++ R+V + ++KF + AG
Sbjct: 468 ASASGSVSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQVLEGEEMAYKFTPKYILRAGQ 527
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
VTVW+ G H PP +V K Q +G+G+ T+L+N DGE
Sbjct: 528 MVTVWAAGA-GVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGE 570
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 306 ELKEARMRLESLSYQLSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRD 365
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 366 VMQQQLAEYQELLDVKLALDMEINAYRKLLEGEEERL 402
>gi|388240801|ref|NP_116126.3| lamin-B2 [Homo sapiens]
gi|119589784|gb|EAW69378.1| lamin B2, isoform CRA_a [Homo sapiens]
Length = 620
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +GKFV+L N ++QSLGNW++ R+V + ++KF + AG
Sbjct: 468 ASASGSVSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYILRAGQ 527
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
VTVW+ G H PP +V K Q +G+G+ T+L+N DGE
Sbjct: 528 MVTVWAAGA-GVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGE 570
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 306 ELKEARMRLESLSYQLSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRD 365
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 366 VMQQQLAEYQELLDVKLALDMEINAYRKLLEGEEERL 402
>gi|426386602|ref|XP_004059772.1| PREDICTED: lamin-B2 [Gorilla gorilla gorilla]
Length = 655
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +GKFV+L N ++QSLGNW++ R+V + ++KF + AG
Sbjct: 464 ASASGSVSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYILRAGQ 523
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
VTVW+ G H PP +V K Q +G+G+ T+L+N DGE
Sbjct: 524 MVTVWAAGA-GVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGE 566
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 302 ELKEARMRLESLSYQLSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRD 361
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 362 VMQQQLAEYQELLDVKLALDMEINAYRKLLEGEEERL 398
>gi|355702953|gb|EHH29444.1| Lamin-B2, partial [Macaca mulatta]
Length = 531
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +GKFV+L N ++QSLGNW++ R++ + ++KF + AG
Sbjct: 379 ASASGSVSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQILEGEEIAYKFTPKYVLRAGQ 438
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
VTVW+ G H PP +V K Q +G+G+ T+L+N DGE
Sbjct: 439 MVTVWAAGA-GVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGE 481
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 219 ELKEARMRLESLSYQLSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRD 278
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI L+E EE L
Sbjct: 279 VMQQQLAEYQELLDVKLALDMEI---NKLLEGEEERL 312
>gi|380817316|gb|AFE80532.1| lamin-B2 [Macaca mulatta]
Length = 601
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +GKFV+L N ++QSLGNW++ R++ + ++KF + AG
Sbjct: 449 ASASGSVSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQILEGEEIAYKFTPKYVLRAGQ 508
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
VTVW+ G H PP +V K Q +G+G+ T+L+N DGE
Sbjct: 509 MVTVWAAGA-GVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGE 551
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 286 ELKEARMRLESLSYQLSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRD 345
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 346 VMQQQLAEYQELLDVKLALDMEINAYRKLLEGEEERL 382
>gi|410052915|ref|XP_524044.4| PREDICTED: lamin-B2 [Pan troglodytes]
Length = 578
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +GKFV+L N ++QSLGNW++ R+V + ++KF + AG
Sbjct: 426 ASASGSVSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQVLEGEEMAYKFTPKYILRAGQ 485
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
VTVW+ G H PP +V K Q +G+G+ T+L+N DGE
Sbjct: 486 MVTVWAAGA-GVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGE 528
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 264 ELKEARMRLESLSYQLSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRD 323
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 324 VMQQQLAEYQELLDVKLALDMEINAYRKLLEGEEERL 360
>gi|297275727|ref|XP_002801064.1| PREDICTED: lamin-B2-like [Macaca mulatta]
Length = 551
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +GKFV+L N ++QSLGNW++ R++ + ++KF + AG
Sbjct: 399 ASASGSVSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQILEGEEIAYKFTPKYVLRAGQ 458
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
VTVW+ G H PP +V K Q +G+G+ T+L+N DGE
Sbjct: 459 MVTVWAAGA-GVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGE 501
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 236 ELKEARMRLESLSYQLSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRD 295
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 296 VMQQQLAEYQELLDVKLALDMEINAYRKLLEGEEERL 332
>gi|74220835|dbj|BAE31384.1| unnamed protein product [Mus musculus]
Length = 574
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +G+FV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 438 GRVAVEEVDEEGEFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 497
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
W+ GATH PP ++V K Q +G G + T L+N+ GE +++ +L
Sbjct: 498 WASGA-GATHSPPTDLVWKAQNTWGCGSSLRTALINSTGEEVAMRKLVRSL 547
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>gi|402903641|ref|XP_003914670.1| PREDICTED: lamin-B2 [Papio anubis]
Length = 621
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +GKFV+L N ++QSLGNW++ R++ + ++KF + AG
Sbjct: 469 ASASGSVSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQILEGEEIAYKFTPKYVLRAGQ 528
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
VTVW+ G H PP +V K Q +G+G+ T+L+N DGE
Sbjct: 529 MVTVWAAGA-GVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGE 571
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 306 ELKEARMRLESLSYQLSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRD 365
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 366 VMQQQLAEYQELLDVKLALDMEINAYRKLLEGEEERL 402
>gi|355755299|gb|EHH59046.1| Lamin-B2, partial [Macaca fascicularis]
Length = 530
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +GKFV+L N ++QSLGNW++ R++ + ++KF + AG
Sbjct: 378 ASASGSVSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQILEGEEIAYKFTPKYVLRAGQ 437
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
VTVW+ G H PP +V K Q +G+G+ T+L+N DGE
Sbjct: 438 MVTVWAAGA-GVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGE 480
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 38/56 (67%), Gaps = 4/56 (7%)
Query: 220 ERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEI 271
+R +ELE+ + E+ KF +M E E+ ++ M +QL +Y+EL+++K+ LD+EI
Sbjct: 246 DRIRELEEAMAGERDKFRKMLDAKEQEMTEMRDVMQQQLAEYQELLDVKLALDMEI 301
>gi|358439962|pdb|3UMN|A Chain A, Crystal Structure Of Lamin-B1
gi|358439963|pdb|3UMN|B Chain B, Crystal Structure Of Lamin-B1
gi|358439964|pdb|3UMN|C Chain C, Crystal Structure Of Lamin-B1
Length = 123
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 70/110 (63%), Gaps = 3/110 (2%)
Query: 72 AKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTV 131
A GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TV
Sbjct: 11 ATGNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTV 69
Query: 132 TVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGELANQERII 180
T+W+ N G T PP +++ KNQ +G+G+++ IL N+ GE Q +
Sbjct: 70 TIWAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGEEVAQRSTV 118
>gi|74148166|dbj|BAE36246.1| unnamed protein product [Mus musculus]
Length = 665
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 438 GRVAVEEVDEEGKFVLLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 497
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNL 183
W+ GATH PP ++V K Q +G G + T L+N+ GE +++ +L
Sbjct: 498 WASGA-GATHSPPTDLVWKAQNTWGCGSSLRTALINSTGEEVAMRKLVRSL 547
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 11/117 (9%)
Query: 180 IDNLRK--EQSSLLL-----ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE 232
+DN R+ E++S L+ EL++++ R ++++L+ + ++LED + E
Sbjct: 271 LDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARE 330
Query: 233 QSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+E EE L
Sbjct: 331 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 387
>gi|347944102|gb|AEP27819.1| Hau-lamin2 [Helobdella sp. Austin]
Length = 613
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFH 120
TSS F +S ++ VDP+GKF+KL N E E +LG WQL + G+ +T++KFH
Sbjct: 460 TSSEFVCSSVTNDIVKFEAVDPEGKFIKLSNTSDEKELALGGWQL-KHSSGDNETTYKFH 518
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
R L ++ G TVTVWS + + H PP ++VMK Q + + +T+LL+ G+
Sbjct: 519 RNLLLKPGSTVTVWSADAD-RVHAPPSDLVMKGQSWHVAEVNNTVLLDQKGD 569
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ +I+ L+ + EQ+++YR+LM+ KI LD EIA YR L+E+EES L
Sbjct: 363 LNVQIRLLKKTIEEQMEEYRDLMDTKIKLDTEIAAYRKLLESEESRL 409
>gi|327263290|ref|XP_003216453.1| PREDICTED: lamin-B1-like [Anolis carolinensis]
Length = 588
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 439 GNICIEEIDVDGKFIRLKNTSDQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 497
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G PP +++ KNQ +G+G ++ +L N GE
Sbjct: 498 WAANA-GVVASPPSDLIWKNQNSWGTGKDVKVLLKNPQGE 536
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R +++ L+ + ER +ELE+ + E+ F R E E+ ++
Sbjct: 291 ELMESRMRIDSLSSQLANLQKESRGWLERMQELEEILAKERDNFRRTLSEKEREMAEIRD 350
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI YR L+E EE L
Sbjct: 351 QMQQQLNDYEQLLDVKLALDMEIHAYRKLLEGEEERL 387
>gi|390478357|ref|XP_003735487.1| PREDICTED: LOW QUALITY PROTEIN: lamin-B2 [Callithrix jacchus]
Length = 620
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAG 128
+SA G++ I E+D +GKFV+L N ++QSLGNW++ R++ +GE + ++KF + AG
Sbjct: 468 ASASGSVSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQIFEGE-EIAYKFTPKYVLRAG 526
Query: 129 GTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
VTVW+ G H PP +V K Q +G+G+ T+L+N DGE
Sbjct: 527 QMVTVWAAGA-GVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGE 570
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 306 ELKEARMRLESLSFQLSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRD 365
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI+ YR L+E EE L
Sbjct: 366 VMQQQLAEYQELLDVKLALDMEISAYRKLLEGEEERL 402
>gi|349604685|gb|AEQ00169.1| Lamin-B1-like protein, partial [Equus caballus]
Length = 183
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 38 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 96
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGELANQERII 180
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE Q +
Sbjct: 97 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGEEVAQRSTV 143
>gi|119589785|gb|EAW69379.1| lamin B2, isoform CRA_b [Homo sapiens]
Length = 483
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +GKFV+L N ++QSLGNW++ R+V + ++KF + AG
Sbjct: 331 ASASGSVSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYILRAGQ 390
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
VTVW+ G H PP +V K Q +G+G+ T+L+N DGE
Sbjct: 391 MVTVWAAGA-GVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGE 433
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 169 ELKEARMRLESLSYQLSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRD 228
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 229 VMQQQLAEYQELLDVKLALDMEINAYRKLLEGEEERL 265
>gi|156372931|ref|XP_001629288.1| predicted protein [Nematostella vectensis]
gi|156216285|gb|EDO37225.1| predicted protein [Nematostella vectensis]
Length = 580
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G ++ TE DPDGK++K+YN G ++++LG W + R+V E + +KF +++ VTV
Sbjct: 442 GAIQFTEADPDGKYIKIYNSGEKDEALGGWTIQRQVGTEDPSVYKFTPKYVLKSQSHVTV 501
Query: 134 WSFNVEGATHEPPHNIVMKN-QKFGSGDEISTILLNTDGE 172
WS G TH+PP ++V K +GSG+E T L+N GE
Sbjct: 502 WSAQG-GGTHKPPSDLVFKQLPSWGSGNEARTALVNAGGE 540
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Query: 206 TEMNELRAANYRLTERNKELE-----DQIEYEQSKFARMEAEIKRLQTEMTEQLKDYREL 260
+++++L A N L R +L+ D+ +++ R E EI L+T + + L+DY +L
Sbjct: 316 SQVHQLEAKNNALVSRVSDLQGLRAQDKEKHDNEILLR-ENEIAELRTSIDDALRDYEDL 374
Query: 261 MEIKINLDVEIAQYRNLMEAEESSL 285
M +K+ LD+EI YR L+E+EE+ L
Sbjct: 375 MGVKVALDMEITAYRKLLESEETRL 399
>gi|410950041|ref|XP_003981722.1| PREDICTED: lamin-B2 [Felis catus]
Length = 485
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G + I EVD +G+FV+L N ++QSLGNW++ R+V + ++KF + AG
Sbjct: 332 ASATGGVGIEEVDLEGRFVQLRNSSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYVLRAGQ 391
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
TVTVW+ G H PP +V ++Q + +GD T+L+N DGE
Sbjct: 392 TVTVWAAGA-GVAHSPPSTLVWRSQNSWSTGDSFRTVLVNADGE 434
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 47/70 (67%), Gaps = 4/70 (5%)
Query: 220 ERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYR 275
+R +ELE+ + E+ KF +M E E+ ++ M +QL +Y+EL+++K+ LD+EI+ YR
Sbjct: 193 DRIRELEETMAGERDKFRKMLDAKEQEMTEMRDVMQQQLAEYQELLDVKLALDMEISAYR 252
Query: 276 NLMEAEESSL 285
L+E EE L
Sbjct: 253 KLLEGEEERL 262
>gi|395510574|ref|XP_003759549.1| PREDICTED: lamin-B1 [Sarcophilus harrisii]
Length = 586
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 66/100 (66%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I ++D DGKF+ L N ++Q +G W+++RK+ G+ ++K+ ++AG TVT+
Sbjct: 436 GNVCIEKIDVDGKFICLKNTSEQDQPMGGWEMIRKI-GDSSVTYKYSSRYVLKAGQTVTI 494
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE
Sbjct: 495 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGE 533
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 7/102 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ +R +ELED + E+ R+ E E+ ++
Sbjct: 288 ELMESQMRIESLSSQLSNLQKEYRACLDRMQELEDLLVKERDNSRRLLSDKEREMAEVRN 347
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL---PT 287
+M +QL +Y +L+++K+ LDVEI YR L+E EE L PT
Sbjct: 348 QMQQQLNEYEQLLDVKLALDVEIRAYRKLLEVEEERLKLSPT 389
>gi|40254675|ref|NP_694504.2| lamin-B1 [Danio rerio]
gi|27881874|gb|AAH44402.1| Lamin B1 [Danio rerio]
gi|182890916|gb|AAI65769.1| Lmnb1 protein [Danio rerio]
Length = 588
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
Query: 69 TSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAG 128
++SA GN+ I E+D DGKF++L+N ++Q + +QL R + GEV ++KF ++AG
Sbjct: 436 SASATGNVSIDELDVDGKFIRLHNNSEQDQPMAGFQLTRTI-GEVTATYKFTAKYNLKAG 494
Query: 129 GTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
VT+W+ N G + PP +++ KNQ +G+G+ I LL+ GE
Sbjct: 495 QKVTIWASNA-GISSNPPADLIWKNQPSWGTGENIKVALLSPAGE 538
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 193 ELKETKGR----SGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQT 248
EL+E+ R +G+ E RA R+ E L + + + A E EI ++
Sbjct: 293 ELRESTLRVESLAGQLANLQKEARAWQDRINELEGALSHEKDLSRRLLAEKEREIAEIRA 352
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL +Y +L+++K+ LD+EI YR L+E EE L
Sbjct: 353 KMQQQLDEYEQLLDVKLALDMEINAYRKLLEGEEERL 389
>gi|13161386|dbj|BAB32979.1| lamin B1 [Carassius auratus]
Length = 318
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 74/116 (63%), Gaps = 3/116 (2%)
Query: 58 SEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSF 117
SE +S ++SA GN+ I E+D DGKF++L+N ++Q + +QL++ V G+V +
Sbjct: 159 SEASSSVRIAHSASATGNICIDELDVDGKFMRLHNNSEQDQPMAGFQLIQTV-GDVSAVY 217
Query: 118 KFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
KF ++AG VT+W+ + G + PP +++ K+Q +GSG++I +LL+ DGE
Sbjct: 218 KFTAKYTLKAGQKVTIWACDA-GVSSSPPADLIWKSQSSWGSGEDIKVLLLSPDGE 272
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 210 ELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDV 269
E RA ++E L + + A E EI ++ +M +QL DY +L+++K+ LD+
Sbjct: 48 EARAWQDHISELEAALSQEKYVSRRLLAEKEREIAEIRAKMQQQLDDYEQLLDVKLALDM 107
Query: 270 EIAQYRNLMEAEESSL 285
EI YR L+E EE L
Sbjct: 108 EINAYRKLLEGEEERL 123
>gi|46329565|gb|AAH68414.1| Lmnb1 protein, partial [Danio rerio]
Length = 587
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
Query: 69 TSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAG 128
++SA GN+ I E+D DGKF++L+N ++Q + +QL R + GEV ++KF ++AG
Sbjct: 435 SASATGNVSIDELDVDGKFIRLHNNSEQDQPMAGFQLTRTI-GEVTATYKFTAKYNLKAG 493
Query: 129 GTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
VT+W+ N G + PP +++ KNQ +G+G+ I LL+ GE
Sbjct: 494 QKVTIWASNA-GISSNPPADLIWKNQPSWGTGENIKVALLSPAGE 537
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 193 ELKETKGR----SGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQT 248
EL+E+ R +G+ E RA R+ E L + + + A E EI ++
Sbjct: 292 ELRESTLRVESLAGQLANLQKEARAWQDRINELEGALSHEKDLSRRLLAEKEREIAEIRA 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL +Y +L+++K+ LD+EI YR L+E EE L
Sbjct: 352 KMQQQLDEYEQLLDVKLALDMEINAYRKLLEGEEERL 388
>gi|351711713|gb|EHB14632.1| Lamin-B2 [Heterocephalus glaber]
Length = 799
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G + I EVD +G+FV+L N ++QSLGNW++ R+V + ++KF + A
Sbjct: 649 ASATGGISIEEVDMEGRFVRLKNHSDKDQSLGNWRIKRQVFEGDEIAYKFTPKYVLRASQ 708
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
TVTVW+ G H PP +V K+Q +G+G+ T+L+N DGE
Sbjct: 709 TVTVWAAGA-GVPHSPPSTLVWKSQSSWGTGERFRTVLVNADGE 751
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 181 DNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKF---- 236
D K S+ ELKE + R +++ L+ E +ELE + E+ KF
Sbjct: 470 DQNNKAASAAREELKEARMRIESLSYQLSSLQNKASADEEHIRELEAAMAGERDKFRSVL 529
Query: 237 ARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
A E E+ +++ M +QL +Y+EL+++K+ LDVEI+ YR L+E EE L
Sbjct: 530 AAKEQEMTQMRDMMQQQLAEYQELLDVKLALDVEISAYRKLLEGEEERL 578
>gi|13161384|dbj|BAB32978.1| lamin B2 [Carassius auratus]
Length = 586
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 79/121 (65%), Gaps = 6/121 (4%)
Query: 57 ESEERTSSG--FQVTSSAK--GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGE 112
E EE +S+G QV+ +A+ G++ + ++D +GK V L N ++QSLG+W+L R++ E
Sbjct: 421 ELEEESSAGPTVQVSQAAEATGSVSVEDIDLEGKSVTLRNNSDKDQSLGSWRLKRQIGDE 480
Query: 113 VKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDG 171
+ ++KF ++AG TVTVWS G +H PP +++ K+Q +G+G+ I T L+N+ G
Sbjct: 481 EEITYKFSPKFVLKAGQTVTVWSARA-GVSHSPPSDLLWKSQSSWGTGEVIITTLVNSSG 539
Query: 172 E 172
E
Sbjct: 540 E 540
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL+E R +++ L+ ER +ELE+ + ++ KF R E E+ ++
Sbjct: 290 ELQEAHVRIESLSYQLSALQKQAATAEERIRELENMLSSDRDKFRRQLDAKEREMAEMRE 349
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL---PT 287
M +QL +Y+EL+++K+ LD+EI YR L+E EE L PT
Sbjct: 350 IMQQQLNEYQELLDVKLALDMEINAYRKLLEGEEDRLKLSPT 391
>gi|348550535|ref|XP_003461087.1| PREDICTED: lamin-B2-like [Cavia porcellus]
Length = 610
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G + I EVD +G+FV+L N ++QSLGNW++ R+V + ++KF + A
Sbjct: 459 ASATGGVSIEEVDLEGRFVRLKNHSDKDQSLGNWKIKRQVFEGDEIAYKFTPKYVLRASQ 518
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
TVTVW+ G H PP +V K Q +G+G T+L+N DGE
Sbjct: 519 TVTVWASGA-GVAHSPPSTLVWKTQSSWGTGKSFRTVLVNADGE 561
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 7/102 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQT 248
EL+E + R +++ L++ ER +ELE + EQ KF A E E+ +++
Sbjct: 286 ELQEARVRMESLGFQLSSLQSKASAAEERTRELEAALAGEQDKFRALLATKEQEMTQMRD 345
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL---PT 287
M +QL +Y+EL+++K+ LDVEI+ YR L+E EE L PT
Sbjct: 346 AMQQQLAEYQELLDVKLALDVEISAYRKLLEGEEERLKLTPT 387
>gi|266618460|pdb|2KPW|A Chain A, Nmr Solution Structure Of Lamin-B1 Protein From Homo
Sapiens: Northeast Structural Genomics Consortium Mega
Target, Hr5546a (439-549)
Length = 122
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ S+K+ ++AG TVT+
Sbjct: 13 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTI 71
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGELANQERII 180
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE Q +
Sbjct: 72 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGEEVAQRSTV 118
>gi|89272234|emb|CAJ83381.1| lamin B1 [Xenopus (Silurana) tropicalis]
Length = 584
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G++ I EVD DGK+++L N ++ LG W+L R + GE +FKF ++AG TVT+
Sbjct: 440 GDVSIEEVDVDGKYIRLKNNSEQDHPLGGWELTRTI-GEASVNFKFTSRYVLKAGQTVTI 498
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ + G T PP +++ KNQ + +G+++ IL N+ GE
Sbjct: 499 WAADA-GVTASPPSDLIWKNQNSWATGEDVKVILKNSQGE 537
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKR----LQT 248
EL E++ R ++++EL+ + +R +ELED + E+ +M AE +R ++
Sbjct: 292 ELMESRYRIDSLTSQLSELQKESRAWHDRMQELEDMLAKEKDNSRKMLAEREREMADIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|45361241|ref|NP_989198.1| lamin B1 [Xenopus (Silurana) tropicalis]
gi|38648995|gb|AAH63368.1| lamin B1 [Xenopus (Silurana) tropicalis]
Length = 584
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G++ I EVD DGK+++L N ++ LG W+L R + GE +FKF ++AG TVT+
Sbjct: 440 GDVSIEEVDVDGKYIRLKNNSEQDHPLGGWELTRTI-GEASVNFKFTSRYVLKAGQTVTI 498
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ + G T PP +++ KNQ + +G+++ IL N+ GE
Sbjct: 499 WAADA-GVTASPPSDLIWKNQNSWATGEDVKVILKNSQGE 537
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKR----LQT 248
EL E++ R ++++EL+ + +R +ELED + E+ +M AE +R ++
Sbjct: 292 ELMESRYRIDSLTSQLSELQKESRAWHDRMQELEDMLAKEKDNSRKMLAEREREMADIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|366392938|ref|NP_571077.2| lamin-B2 [Danio rerio]
gi|190336637|gb|AAI62105.1| Lamin B2 [Danio rerio]
Length = 583
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 77/121 (63%), Gaps = 6/121 (4%)
Query: 57 ESEERTSSGFQVTSS----AKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGE 112
E EE +++G +V S A G++ I E+D +GK V L N ++QSLG+W+L R++
Sbjct: 417 ELEESSTAGPKVQISQQAEASGSVSIEEIDLEGKSVTLRNNSDKDQSLGSWRLKRQIGDG 476
Query: 113 VKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDG 171
+ +KF ++AG TVTVWS + G +H PP +++ K+Q +G+G+ I T+L+N+ G
Sbjct: 477 EEIVYKFSPKFVLKAGQTVTVWSADA-GMSHSPPSDLLWKSQSSWGTGENILTLLVNSSG 535
Query: 172 E 172
E
Sbjct: 536 E 536
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL+E R +++ L+ ER +ELE + ++ K+ R E E+ ++
Sbjct: 286 ELQEAHVRIEGLSYQLSALQKQASAAEERIRELEGLLSSDRDKYRRQLDAKEREMAEMRE 345
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 346 CMQQQLNEYQELLDVKLALDMEINAYRKLLEGEEDRL 382
>gi|998563|gb|AAB34119.1| B-type nuclear lamin [Lytechinus variegatus, Peptide, 456 aa]
Length = 456
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 18/153 (11%)
Query: 35 GTPSRGSVA------PSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFV 88
TP R + A PSK+R++ E+ +S T+S G + I E DP+GKFV
Sbjct: 296 STPPRKTKAASRDPRPSKRRRV--------EDESSITQSATNS--GVVAIVESDPEGKFV 345
Query: 89 KLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHN 148
KL+N +Q+LG W L R G + S+KF ++AG VTVW+ G + P +
Sbjct: 346 KLHNNSETDQALGGWHLKRSADGGSEQSYKFTSKYVLKAGQEVTVWASG-SGKSQSAPTD 404
Query: 149 IVMKN-QKFGSGDEISTILLNTDGELANQERII 180
+V KN + +G+GD + T L++ GE+ +I
Sbjct: 405 LVFKNTESWGTGDNVETTLVDASGEVMATRTVI 437
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 60/99 (60%), Gaps = 8/99 (8%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEA------EIKRL 246
E+++ + ++E+ +RA N L R K+LE Q+ EQ +EA E+++L
Sbjct: 197 EVRKLRSTVDDLNSEITTIRAQNDALIARIKDLEKQLRQEQDDH--LEAITLRDKELQQL 254
Query: 247 QTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ + EQL+DY +L+ IK++LD EIA YR L+E EE+ L
Sbjct: 255 RDAVAEQLRDYDDLLNIKLSLDNEIATYRKLLEGEETRL 293
>gi|10803365|emb|CAC13104.1| nuclear lamin [Branchiostoma lanceolatum]
Length = 630
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 69 TSSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKIEA 127
+++A G + I EVD +GKFVKL N +E + S+G W L R V GE + S+KF ++A
Sbjct: 478 SATASGFITIDEVDLEGKFVKLQNTSAEKDMSMGGWLLKRTVGGEEEISYKFPPRYVLKA 537
Query: 128 GGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
G +VTVW G +H PP +++ + Q +GSGD+ T+L+N GE
Sbjct: 538 GQSVTVWGTE-GGGSHSPPSDLLFRGQASWGSGDDTETLLVNDSGE 582
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 7/102 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQI----EYEQSKFARMEAEIKRLQT 248
E++E++ R ++++ L+ N L R KELE + E +S + E I++L+
Sbjct: 308 EMRESRARIDSLMSQVSGLQGQNASLEARCKELEGMMARMSEESRSSSEQYERGIRQLRE 367
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL---PT 287
E+++ + DY+ELM+IKI LD+EI+ YR L+E EE L PT
Sbjct: 368 EISQMMVDYQELMDIKIALDLEISAYRTLLEGEEQRLKLTPT 409
>gi|18072745|emb|CAC80098.1| lamin [Branchiostoma lanceolatum]
Length = 454
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 69 TSSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKIEA 127
+++A G + I EVD +GKFVKL N +E + S+G W L R V G + S+KF ++A
Sbjct: 302 SATASGFITIDEVDLEGKFVKLQNTSAEKDMSMGGWLLKRTVGGGEEISYKFPSRYVLKA 361
Query: 128 GGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
G +VTVW+ G TH PP +++ + Q +GSGD+ T+L+N GE
Sbjct: 362 GQSVTVWATE-GGVTHSPPSDLLFRGQASWGSGDDTKTLLVNDSGE 406
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQI----EYEQSKFARMEAEIKRLQT 248
E++E++ R ++++ L+ N L R KELE + E +S + E I++L+
Sbjct: 132 EMRESRARIDSLMSQVSGLQGQNASLEARCKELEGMMARMSEESRSSSEQYERGIRQLRE 191
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E+++ + DY+ELM+IKI LD+EI+ YR L+E EE L
Sbjct: 192 EISQMMVDYQELMDIKIALDLEISAYRTLLEGEEQRL 228
>gi|23200154|pdb|1IVT|A Chain A, Nmr Structures Of The C-Terminal Globular Domain Of Human
Lamin AC
Length = 122
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 70/116 (60%), Gaps = 2/116 (1%)
Query: 66 FQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
F + G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F +
Sbjct: 3 FSQHARTSGRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTL 62
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERII 180
+AG VT+W+ GATH PP ++V K Q +G G+ + T L+N+ GE +++
Sbjct: 63 KAGQVVTIWAAGA-GATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLV 117
>gi|170591494|ref|XP_001900505.1| intermediate filament protein [Brugia malayi]
gi|158592117|gb|EDP30719.1| intermediate filament protein, putative [Brugia malayi]
Length = 573
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
TSS T SAKGN+ I E PDGKF+ L N S+E+ +G W+L RK+ G+ + +
Sbjct: 448 TSSRTSYTRSAKGNVSIQETSPDGKFIILENTHRSKEEPIGEWKLKRKIDGKREIVYTLP 507
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
R ++ TV +WS +G H PP ++ ++++ FG G+ + TIL N +GE
Sbjct: 508 RDFILKPSKTVKIWSRG-QGGVHAPPEQLIFESEESFGVGNNVQTILYNKEGE 559
>gi|393911392|gb|EFO27005.2| intermediate filament protein [Loa loa]
Length = 581
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
TSS T SAKGN+ I E PDGKF+ L N S+E+ +G W+L RK+ G+ + +
Sbjct: 456 TSSRTSYTRSAKGNISIQETSPDGKFIVLENTHRSKEEPIGEWKLKRKIDGKREIVYTLP 515
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
R ++ TV +WS +G H PP ++ + ++ FG G + TIL N +GE
Sbjct: 516 RDFILKPSKTVKIWSHG-QGGVHAPPEQLIFEAEESFGVGSNVQTILYNKEGE 567
>gi|312068121|ref|XP_003137065.1| intermediate filament protein [Loa loa]
Length = 531
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
TSS T SAKGN+ I E PDGKF+ L N S+E+ +G W+L RK+ G+ + +
Sbjct: 406 TSSRTSYTRSAKGNISIQETSPDGKFIVLENTHRSKEEPIGEWKLKRKIDGKREIVYTLP 465
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
R ++ TV +WS +G H PP ++ + ++ FG G + TIL N +GE
Sbjct: 466 RDFILKPSKTVKIWSHG-QGGVHAPPEQLIFEAEESFGVGSNVQTILYNKEGE 517
>gi|159163124|pdb|1UFG|A Chain A, Solution Structure Of Immunoglobulin Like Domain Of Mouse
Nuclear Lamin
Length = 151
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 38 GRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 97
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERII 180
W+ GATH PP ++V K Q +G G + T L+N+ GE +++
Sbjct: 98 WASGA-GATHSPPTDLVWKAQNTWGCGSSLRTALINSTGEEVAMRKLV 144
>gi|354488701|ref|XP_003506506.1| PREDICTED: lamin-B2 [Cricetulus griseus]
gi|344247045|gb|EGW03149.1| Lamin-B2 [Cricetulus griseus]
Length = 602
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Query: 78 ITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFN 137
I EVD +G+FV+L N ++QSLGNW++ R+V ++KF + AG TVTVW+
Sbjct: 453 IDEVDLEGRFVRLKNASDKDQSLGNWRIKRQVPEGEDIAYKFTPKYVLRAGQTVTVWASG 512
Query: 138 VEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
G H PP +V K+Q +G G+ T+L+N DGE
Sbjct: 513 A-GVIHSPPSTLVWKSQSSWGCGESSRTVLVNADGE 547
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 284 ELKEARMRVESLSYQLSGLQKQASAAEDRIRELEEAVAGERDKFRKMLDAKEQEMTEVRD 343
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL++IK+ LD+EI+ YR L+E EE L
Sbjct: 344 AMQQQLAEYQELLDIKLALDMEISAYRKLLEGEEERL 380
>gi|22218770|pdb|1IFR|A Chain A, Structure Of Lamin AC GLOBULAR DOMAIN
Length = 121
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+
Sbjct: 7 GRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTI 66
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERII 180
W+ GATH PP ++V K Q +G G+ + T L+N+ GE +++
Sbjct: 67 WAAGA-GATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLV 113
>gi|4678403|emb|CAB41015.1| lamin B2 [Danio rerio]
Length = 583
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 76/121 (62%), Gaps = 6/121 (4%)
Query: 57 ESEERTSSGFQVTSS----AKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGE 112
E EE +++G + S A G++ I E+D +GK V L N ++QSLG+W+L R++
Sbjct: 417 ELEESSTAGPKAQISQQAEASGSVSIEEIDLEGKSVTLRNNSDKDQSLGSWRLKRQIGDG 476
Query: 113 VKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDG 171
+ +KF ++AG TVTVWS + G +H PP +++ K+Q +G+G+ I T+L+N+ G
Sbjct: 477 EEIVYKFSPKFVLKAGQTVTVWSADA-GMSHSPPSDLLWKSQSSWGTGENILTLLVNSSG 535
Query: 172 E 172
E
Sbjct: 536 E 536
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL+E R +++ L+ ER +ELE + ++ K+ R E E+ ++
Sbjct: 286 ELQEAHVRIEGLSYQLSALQKQASAAEERIRELEGLLSSDRDKYRRQLDAKEREMAEMRE 345
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 346 CMQQQLNEYQELLDVKLALDMEINAYRKLLEGEEDRL 382
>gi|301621493|ref|XP_002940085.1| PREDICTED: lamin-L(II) [Xenopus (Silurana) tropicalis]
Length = 623
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 72/114 (63%), Gaps = 4/114 (3%)
Query: 62 TSSGFQVT--SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKF 119
+S+ F ++ +SA G++ I E+D +GK+V L N ++QSLGNW+L RK+ E + +KF
Sbjct: 464 SSTRFHLSQQASATGSISIEEIDLEGKYVHLKNNSDKDQSLGNWRLKRKIGEEEEIVYKF 523
Query: 120 HRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
++AG +V ++S + G H PP +V KNQ +G+G I T L+NT+ E
Sbjct: 524 TPKYVLKAGQSVKIYSADA-GVAHSPPSILVWKNQSTWGTGSNIRTYLVNTEEE 576
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 171 GELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIE 230
+L N +R D+ K ++ EL E + R +++ L+ +R +ELE +
Sbjct: 273 AKLDNIKRSSDHNDKAANTAREELTEARMRIETLSYQLSGLQKQANAAEDRIRELEQLLS 332
Query: 231 YEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++ K+ ++ E E+ ++ +M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 333 SDRDKYRKLLDSKEKEMAEMRDQMQQQLTEYQELLDVKLALDMEINAYRKLLEGEEERL 391
>gi|392788|gb|AAC46974.1| intermediate filament protein [Brugia malayi]
Length = 506
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
TSS T SAKGN+ I E PDGKF+ L N S+E+ +G W+L RK+ G+ + +
Sbjct: 381 TSSRTSYTRSAKGNVSIQETSPDGKFIILENTHRSKEEPIGEWKLKRKIDGKREIVYTLP 440
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
R ++ TV +WS EG H PP ++ ++++ FG G + TIL N GE
Sbjct: 441 RDFILKPSKTVKIWSRGQEGV-HAPPEQLIFESEESFGVGSNVQTILYNKKGE 492
>gi|345758|pir||A45023 lamin B2 - human (fragment)
gi|1054874|gb|AAA80979.1| lamin B2, partial [Homo sapiens]
Length = 515
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G I E+D +GKFV+L N ++QSLGNW++ R+V + ++KF + AG VTV
Sbjct: 367 GQRHIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYILRAGQMVTV 426
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
W+ G H PP +V K Q +G+G+ T+L+N DGE
Sbjct: 427 WAAGA-GVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGE 465
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 202 ELKEARMRLESLSYQLSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRD 261
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
M +QL +Y+EL+++K+ LD+EI YR L+E EE
Sbjct: 262 VMQQQLAEYQELLDVKLALDMEINAYRKLLEGEE 295
>gi|359545625|pdb|2LLL|A Chain A, Solution Nmr Structure Of C-Terminal Globular Domain Of
Human Lamin- B2, Northeast Structural Genomics
Consortium Target Hr8546a
Length = 139
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 71 SAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGT 130
SA G++ I E+D +GKFV+L N ++QSLGNW++ R+V + ++KF + AG
Sbjct: 19 SASGSVSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYILRAGQM 78
Query: 131 VTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
VTVW+ G H PP +V K Q +G+G+ T+L+N DGE
Sbjct: 79 VTVWAAGA-GVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGE 120
>gi|255311804|pdb|3GEF|A Chain A, Crystal Structure Of The R482w Mutant Of Lamin AC
gi|255311805|pdb|3GEF|B Chain B, Crystal Structure Of The R482w Mutant Of Lamin AC
gi|255311806|pdb|3GEF|C Chain C, Crystal Structure Of The R482w Mutant Of Lamin AC
gi|255311807|pdb|3GEF|D Chain D, Crystal Structure Of The R482w Mutant Of Lamin AC
Length = 118
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Query: 71 SAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGT 130
S G + + EVD +GKFV+L NK +E+QS+GNWQ+ R+ + ++ F ++AG
Sbjct: 1 STSGRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYWFPPKFTLKAGQV 60
Query: 131 VTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERII 180
VT+W+ GATH PP ++V K Q +G G+ + T L+N+ GE +++
Sbjct: 61 VTIWAAGA-GATHSPPTDLVWKAQNTWGXGNSLRTALINSTGEEVAMRKLV 110
>gi|6065833|emb|CAB58234.1| lamin B1 protein [Danio rerio]
Length = 588
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
Query: 69 TSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAG 128
++SA GN+ I E+D DGKF++L+N ++Q + +QL R + GEV ++KF ++AG
Sbjct: 436 SASATGNVSIDELDVDGKFIRLHNNSEQDQPMAGFQLTRTI-GEVTATYKFTAKYNLKAG 494
Query: 129 GTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
VT+W+ N G + P +++ KNQ +G+G+ I LL+ GE
Sbjct: 495 QKVTIWASNA-GISSNPSADLIWKNQASWGTGENIKVALLSPAGE 538
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 193 ELKETKGR----SGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQT 248
EL+E+ R +G+ E RA R+ E L + + + A E EI ++
Sbjct: 293 ELRESTLRVESLAGQLANLQKEARAWQDRINELEGALSHEKDLSRRSLAEKEREIAEIRA 352
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL +Y +L+++K+ LD+EI YR L+E EE L
Sbjct: 353 KMQQQLDEYEQLLDVKLALDMEINAYRKLLEGEEERL 389
>gi|402591300|gb|EJW85230.1| hypothetical protein WUBG_03860 [Wuchereria bancrofti]
Length = 614
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
TSS T SAKGN+ I E PDGKF+ L N S+E+ +G W+L RK+ G+ + +
Sbjct: 412 TSSRTSYTRSAKGNVSIQETSPDGKFIILENTHRSKEEPIGEWKLKRKIDGKREIVYTLP 471
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
R ++ TV +WS +G H PP ++ ++++ FG G + TIL N +GE
Sbjct: 472 RDFILKPSKTVKIWSRG-QGGIHAPPEQLIFESEESFGVGSNVQTILYNKEGE 523
>gi|349803803|gb|AEQ17374.1| putative achain of lamin-b1 [Hymenochirus curtipes]
Length = 167
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
Query: 69 TSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAG 128
+++A GN+ I E+D DGKF++L N + Q LG W+++R + GE ++KF ++AG
Sbjct: 58 SATATGNISIEELDVDGKFIRLKNNVEQGQPLGGWEMIRTI-GETSVNYKFTSRYVLKAG 116
Query: 129 GTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
TVT+W+ N G PP +++ KNQ + +G++I L N+ GE
Sbjct: 117 QTVTIWAANA-GVPASPPSDLIWKNQNSWATGEDIKVTLKNSQGE 160
>gi|156119485|ref|NP_001095239.1| lamin-L(II) [Xenopus laevis]
gi|125958|sp|P21910.1|LAML2_XENLA RecName: Full=Lamin-L(II); Flags: Precursor
gi|64884|emb|CAA38033.1| lamin LII [Xenopus laevis]
Length = 623
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +GK+V L N ++QSLGNW+L RK+ E + +KF ++AG
Sbjct: 474 ASATGSISIEEIDLEGKYVHLKNNSDKDQSLGNWRLKRKIGEEEEIVYKFTPKYVLKAGQ 533
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+V ++S + G H PP +V KNQ +G+G I T L+NT+ E
Sbjct: 534 SVKIYSADA-GVAHSPPSILVWKNQSSWGTGSNIRTYLVNTEEE 576
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E E+ ++ +M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 346 EREMAEMRDQMQQQLNEYQELLDVKLALDLEINAYRKLLEGEEERL 391
>gi|259090405|pdb|3JT0|A Chain A, Crystal Structure Of The C-Terminal Fragment (426-558)
Lamin-B1 From Homo Sapiens, Northeast Structural
Genomics Consortium Target Hr5546a
gi|259090406|pdb|3JT0|B Chain B, Crystal Structure Of The C-Terminal Fragment (426-558)
Lamin-B1 From Homo Sapiens, Northeast Structural
Genomics Consortium Target Hr5546a
Length = 144
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
GN+ I E+D DGKF++L N ++Q G W+ +RK+ G+ S+K+ ++AG TVT+
Sbjct: 26 GNVCIEEIDVDGKFIRLKNTSEQDQPXGGWEXIRKI-GDTSVSYKYTSRYVLKAGQTVTI 84
Query: 134 WSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGELANQERII 180
W+ N G T PP +++ KNQ +G+G+++ IL N+ GE Q +
Sbjct: 85 WAANA-GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGEEVAQRSTV 131
>gi|50417542|gb|AAH77526.1| LOC397912 protein [Xenopus laevis]
Length = 623
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +GK+V L N ++QSLGNW+L RK+ E + +KF ++AG
Sbjct: 474 ASATGSISIEEIDLEGKYVHLKNNSDKDQSLGNWRLKRKIGEEEEIVYKFTPKYVLKAGQ 533
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+V ++S + G H PP +V KNQ +G+G I T L+NT+ E
Sbjct: 534 SVKIYSADA-GVAHSPPSILVWKNQSSWGTGSNIRTYLVNTEEE 576
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E E+ ++ +M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 346 EREMAEMRDQMQQQLNEYQELLDVKLALDLEINAYRKLLEGEEERL 391
>gi|7159290|gb|AAF37702.1|AF237484_1 intermediate filament protein [Dirofilaria immitis]
Length = 506
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
TSS T SAKGN+ I E PDGKF+ L N S+E+S+G W+L RK+ G+ + +
Sbjct: 381 TSSRTSYTRSAKGNVSIQETSPDGKFIVLENTHRSKEESIGEWKLKRKIDGKREIVYTLP 440
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMK-NQKFGSGDEISTILLNTDGE 172
R ++ TV +W +G H PP ++ + FG G + TIL N +GE
Sbjct: 441 RDFILKPSKTVKIWGRG-QGGIHAPPEQLIFDVEESFGVGSNVQTILYNKEGE 492
>gi|148229806|ref|NP_001081547.1| lamin-L(I) [Xenopus laevis]
gi|125955|sp|P09010.1|LAML1_XENLA RecName: Full=Lamin-L(I); Flags: Precursor
gi|64882|emb|CAA29651.1| unnamed protein product [Xenopus laevis]
Length = 583
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 69 TSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAG 128
+++A G++ I EVD DGK+++L N ++ LG W+L R + GE +FKF ++A
Sbjct: 434 SAAATGDVSIEEVDVDGKYIRLKNNSEKDHPLGGWELTRTI-GEASVNFKFTSRYVLKAE 492
Query: 129 GTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGELANQERII 180
TVT+W+ + G PP +++ KNQ +G+G+++ L N+ GE Q I
Sbjct: 493 QTVTIWAADA-GVKASPPSDLIWKNQNSWGTGEDVKATLKNSQGEEVAQRTTI 544
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKR----LQT 248
EL E++ R ++++EL+ + +R +ELED + E+ +M AE +R ++
Sbjct: 292 ELMESRIRIDSLTSQLSELQKESRAWHDRMQELEDMLAKEKDNSRKMLAEREREMADIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|54037965|gb|AAH84199.1| LOC397911 protein [Xenopus laevis]
Length = 582
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 69 TSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAG 128
+++A G++ I EVD DGK+++L N ++ LG W+L R + GE +FKF ++A
Sbjct: 434 SAAATGDVSIEEVDVDGKYIRLKNNSEKDHPLGGWELTRTI-GEASVNFKFTSRYVLKAE 492
Query: 129 GTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGELANQERII 180
TVT+W+ + G PP +++ KNQ +G+G+++ L N+ GE Q I
Sbjct: 493 QTVTIWAADA-GVKASPPSDLIWKNQNSWGTGEDVKATLKNSQGEEVAQRTTI 544
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKR----LQT 248
EL E++ R ++++EL+ + +R +ELED + E+ +M AE +R ++
Sbjct: 292 ELMESRIRIDSLTSQLSELQKESRAWHDRMQELEDMLAKEKDNSRKMLAEREREMADIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
>gi|147901703|ref|NP_001080947.1| lamin B2 [Xenopus laevis]
gi|49115181|gb|AAH73219.1| Lmnb2-A-prov protein [Xenopus laevis]
Length = 624
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +GK+V L N ++QSLGNW+L RK+ E + +KF ++AG
Sbjct: 475 ASATGSISIEEIDLEGKYVHLKNNSDKDQSLGNWRLKRKIGEEEEIVYKFTPKYVLKAGQ 534
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+V ++S + G H PP +V KNQ +G+G I T L+NT+ E
Sbjct: 535 SVKIYSADA-GVAHSPPSILVWKNQSSWGTGCNIRTYLVNTEEE 577
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 171 GELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIE 230
+L N +R D+ K ++ EL E + R +++ L+ ER + LE+ +
Sbjct: 274 AKLDNIKRSSDHNDKAANTAREELTEARMRIETLSYQLSGLQKQANAAEERIRALEELLS 333
Query: 231 YEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++ K+ ++ E E+ ++ +M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 334 SDRDKYRKLLDSKEREMAEMRDQMQQQLTEYQELLDVKLALDMEINAYRKLLEGEEERL 392
>gi|3414965|gb|AAC31544.1| lamin B2 [Xenopus laevis]
Length = 561
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+SA G++ I E+D +GK+V L N ++QSLGNW+L RK+ E + +KF ++AG
Sbjct: 412 ASATGSISIEEIDLEGKYVHLKNNSDKDQSLGNWRLKRKIGEEEEIVYKFTPKYVLKAGQ 471
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+V ++S + G H PP +V KNQ +G+G I T L+NT+ E
Sbjct: 472 SVKIYSADA-GVAHSPPSILVWKNQSSWGTGCNIRTYLVNTEEE 514
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 171 GELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIE 230
+L N +R D+ K ++ EL E + R +++ L+ ER + LE+ +
Sbjct: 211 AKLDNIKRSSDHNDKAANTAREELTEARMRIETLSYQLSGLQKQANAAEERIRALEELLS 270
Query: 231 YEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++ K+ ++ E E+ ++ +M +QL +Y+EL+++K+ LD+EI YR L+E +E L
Sbjct: 271 SDRDKYRKLLDSKEREMAEMRDQMQQQLTEYQELLDVKLALDMEINAYRKLLEGQEERL 329
>gi|348522746|ref|XP_003448885.1| PREDICTED: lamin-B2-like [Oreochromis niloticus]
Length = 579
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
++A G + I+ D DG V L N ++Q LGNW+L R+V + +KF ++AG
Sbjct: 439 ATATGAVTISPTDMDGNAVTLTNDTEQDQPLGNWRLKRQVDNGEEIIYKFSPKYVLKAGQ 498
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+VTVWS + G H PP +++ K+Q +G G++I T L+N DGE
Sbjct: 499 SVTVWSADA-GMAHSPPADLLWKSQASWGRGNDIVTSLVNADGE 541
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 185 KEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----E 240
K SS EL+E++ R +++ L+ +R +ELE+ + E+ K R E
Sbjct: 283 KAMSSAREELQESRTRIESLGYQLSALQKQVTASEDRIRELEEILSSERDKHRRAIEAKE 342
Query: 241 AEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E+ L+ M QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 343 QEMGELRDRMNAQLSEYQELLDVKLALDMEINAYRKLLEGEEHRL 387
>gi|449471596|ref|XP_002197189.2| PREDICTED: lamin-L(III)-like [Taeniopygia guttata]
Length = 660
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 71 SAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGT 130
SA GN+ I E+D DGKFV+L N E+QSL W L R++ ++KF ++AG
Sbjct: 513 SATGNISIEEIDADGKFVRLKNHSDEDQSLHGWVLRRRIGTVADVTYKFPSRFTLQAGQE 572
Query: 131 VTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERII 180
VT+W P ++V K+QK +G+GD I L+ DGE + +I+
Sbjct: 573 VTIW--GAAAGVSPGPGDLVWKSQKSWGTGDNIGVTLITDDGEELAERKIM 621
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQS----KFARMEAEIKRLQT 248
EL ET+ R +++N+ ++ N L R +EL++ ++Y++ + A E E+ + Q
Sbjct: 368 ELMETQKRVDTLISQVNQYQSQNIALESRIQELQNLLDYDRDLHRRRMAEKEEEMAQAQR 427
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ QL++Y L+++K+ LD+EI YR ++E EE L
Sbjct: 428 QAQAQLEEYEHLLDVKLALDLEINAYRKMLEGEEQRL 464
>gi|449266841|gb|EMC77835.1| Lamin-L(III), partial [Columba livia]
Length = 414
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 88/172 (51%), Gaps = 22/172 (12%)
Query: 33 VAGTPSRGSVAPS-----------KKRKLNILEEYESEERTSS-GFQVT--SSAKGNMEI 78
++ +PS SVA KKRK+ E+ +R S GF+ +S+ GN+ I
Sbjct: 218 LSPSPSSQSVATQATTQGRRFLQGKKRKMK-----ETRKRGHSLGFKTVQHASSSGNVSI 272
Query: 79 TEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNV 138
E+D DGKFV+L N E+Q L W L R + ++KF ++AG VT+W
Sbjct: 273 EEIDADGKFVRLKNNSDEDQMLHGWVLRRHLGNVSDVTYKFPSQFTLQAGQVVTIW--GA 330
Query: 139 EGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERIIDNLRKEQSS 189
P ++V K+QK +G+G++I L+ DGE + +II R E+SS
Sbjct: 331 AAGVSPGPSDLVWKSQKSWGTGNDIGVKLITDDGEELAERKIIYVPRGEESS 382
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
EL ETK R +++N+ ++ N L R +EL+D ++Y+ Q + A E E+ Q
Sbjct: 120 ELMETKMRIDTLTSQVNQYQSQNVALESRIRELQDMLDYDRDLHQRRMAEKEKEMAEAQK 179
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ QL++Y L+++K+ LD+EI+ YR ++E EE L
Sbjct: 180 QAQTQLEEYEHLLDVKLALDLEISAYRKMLEGEEQRL 216
>gi|124232|sp|P23730.1|IFEA_ASCSU RecName: Full=Intermediate filament protein A; Short=IF-A
Length = 497
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T+S SAKGN+ I E PDG++V L N S+E+++G W+L RK+ G+ + +
Sbjct: 373 TASRTSFQRSAKGNVSIQETAPDGRYVVLENTHRSKEEAIGEWKLKRKIDGKREIVYTLP 432
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMK-NQKFGSGDEISTILLNTDGE 172
R + G +V +W+ +G H PP +V FGSG + TIL N +GE
Sbjct: 433 RDFILRPGKSVKIWARG-QGGIHSPPEQLVFDLEDTFGSGSNVQTILFNREGE 484
>gi|763066|emb|CAA60045.1| cytoplasmic intermediate filament protein [Ascaris lumbricoides]
gi|324510334|gb|ADY44320.1| Intermediate filament protein A, partial [Ascaris suum]
Length = 610
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T+S SAKGN+ I E PDG++V L N S+E+++G W+L RK+ G+ + +
Sbjct: 485 TASRTSFQRSAKGNVSIQETAPDGRYVVLENTHRSKEEAIGEWKLKRKIDGKREIVYTLP 544
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMK-NQKFGSGDEISTILLNTDGE 172
R + G +V +W+ +G H PP +V FGSG + TIL N +GE
Sbjct: 545 RDFILRPGKSVKIWARG-QGGIHSPPEQLVFDLEDTFGSGSNVQTILFNREGE 596
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
+ LR + + L +L + +GR+ + + EL NY+L + DQ YE + R
Sbjct: 359 VKRLRVQLTDLRGKLADLEGRNSLLEKQTQEL---NYQLED------DQRSYEAALNDR- 408
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES 283
+A+I++++ E + + + L++ K LD EIA YR ++E EE+
Sbjct: 409 DAQIRKMREECQALMLELQMLLDTKQTLDAEIAIYRKMLEGEEN 452
>gi|344306977|ref|XP_003422159.1| PREDICTED: lamin-B2 [Loxodonta africana]
Length = 655
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 66 FQVT--SSAKGNMEITEVDPDGKFVKLYNKG----SEEQSLGNWQLVRKVQGEVKTSFKF 119
FQ+ +SA G++ I +++ +GKFV+L N S +QSL NW++ R+V + ++KF
Sbjct: 446 FQLAQQASATGSISIEDINLEGKFVQLKNNSNKMSSVDQSLSNWRIKRQVVEGDEIAYKF 505
Query: 120 HRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+ AG TVTVW+ G H PP +V K+Q +G+G TIL+N DGE
Sbjct: 506 TPKYVLRAGQTVTVWAAGA-GVAHSPPATLVWKSQNSWGTGTSFRTILVNADGE 558
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ I E+ +F +M E E+ ++
Sbjct: 287 ELKEARVRVESLSYQLSSLQKQASAAEDRIRELEETIAGERDRFRKMLDAKEREMTEMRD 346
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LDVEI+ YR L+E EE L
Sbjct: 347 MMQQQLAEYQELLDVKLALDVEISAYRKLLEGEEERL 383
>gi|339243637|ref|XP_003377744.1| intermediate filament protein ifa-1 [Trichinella spiralis]
gi|316973417|gb|EFV57011.1| intermediate filament protein ifa-1 [Trichinella spiralis]
Length = 644
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 71 SAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
SAKGN+ I+E +PDGKF+ L N ++++ L W+L RK+ G+ + F F ++AG
Sbjct: 525 SAKGNVSISECNPDGKFIVLENTHRAKDEPLDEWKLKRKIDGKREVVFTFPPKFVLKAGK 584
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
V VW+ N +G ++PP+ ++ + + +G G + TIL N DGE
Sbjct: 585 NVKVWARN-QGGVNDPPNQLIFEGEDNWGVGQNVQTILYNKDGE 627
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
E+K + + G ++ +L + N L ++ +EL Q+E +Q ++ + +I++++
Sbjct: 389 EVKRLRSQMGDLRGKLGDLESRNSLLEKQVQELTYQLEDDQRQYESALNDRDGQIRKMRE 448
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES 283
E + + + L++ K LD EIA YR ++E EE+
Sbjct: 449 ECQALMVELQMLLDTKQTLDAEIAIYRKMLEGEEN 483
>gi|410920742|ref|XP_003973842.1| PREDICTED: lamin-B2-like [Takifugu rubripes]
Length = 632
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
++A G + I+ D +G V L N +++Q +G+W+L R+V + +KF ++AG
Sbjct: 433 ATASGAVTISPTDMNGNAVTLTNDTAQDQPMGSWRLKRQVDCGDEVFYKFTPKFVLKAGQ 492
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+VTVWS + G H PP +++ K+Q +G+G+E+ TIL+N DGE
Sbjct: 493 SVTVWSADA-GVVHSPPTDLLWKSQASWGTGNEMVTILINGDGE 535
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQT 248
EL E++ R + ++N L+ +R ++LE+ + E+ K R E E+ L+
Sbjct: 289 ELLESRMRIERLGEKLNALQKQVSASEDRIRDLEETLSAERDKHRREIERKEQEMAELRE 348
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 349 MMNTQLGEYQELLDVKLALDMEINAYRKLLEGEEHRL 385
>gi|324500130|gb|ADY40071.1| Intermediate filament protein A [Ascaris suum]
Length = 1245
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 67/118 (56%), Gaps = 7/118 (5%)
Query: 57 ESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKT 115
E+ RTS FQ SAKGN+ I E PDG++V L N S+E+++G W+L RK+ G+ +
Sbjct: 1119 ETASRTS--FQ--RSAKGNVSIQETAPDGRYVVLENTHRSKEEAIGEWKLKRKIDGKREI 1174
Query: 116 SFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMK-NQKFGSGDEISTILLNTDGE 172
+ R + G +V +W+ +G H PP +V FGSG + TIL N +GE
Sbjct: 1175 VYTLPRDFILRPGKSVKIWARG-QGGIHSPPEQLVFDLEDTFGSGSNVQTILFNREGE 1231
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 10/103 (9%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
+ LR + + L +L + +GR+ + + EL NY+L + DQ YE + R
Sbjct: 994 VKRLRVQLTDLRGKLADLEGRNSLLEKQTQEL---NYQLED------DQRSYEAALNDR- 1043
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
+A+I++++ E + + + L++ K LD EIA YR ++E EE
Sbjct: 1044 DAQIRKMREECQALMLELQMLLDTKQTLDAEIAIYRKMLEGEE 1086
>gi|4886319|emb|CAB43346.1| lamin [Hydra vulgaris]
Length = 549
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 11/147 (7%)
Query: 35 GTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG 94
TP RGS + ++ +E + V ++A G++EI E D D KFV+L N
Sbjct: 385 STPPRGSTSKRGTKRSRADDEEQP--------HVENNAIGSIEIAECDSDAKFVRLINNS 436
Query: 95 SEEQSLGNWQLVRKVQG--EVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMK 152
+++ LG W + R V G E +KF ++ TVT+WS N G +PP + V+K
Sbjct: 437 DKDEPLGGWSVQRIVDGKDEQAVEYKFTPKFVLKGKQTVTIWSQN-SGVKQKPPTDFVLK 495
Query: 153 NQKFGSGDEISTILLNTDGELANQERI 179
+ + G ++T L+N D E+ + I
Sbjct: 496 QEDWSHGSSMTTSLINPDAEIVAKHTI 522
>gi|47211071|emb|CAF89686.1| unnamed protein product [Tetraodon nigroviridis]
Length = 708
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 33/158 (20%)
Query: 44 PSKKRKLNILEEYESEERTSSGFQVT-------SSAKGNMEITEVDPDGKFVKLYNKGSE 96
P+K+R+ N + +SE + G V +SA G + + EVD +GKFV+L NK E
Sbjct: 430 PAKRRRPN---DSDSEASSVVGGAVARTRISQQASASGRVTVDEVDLEGKFVRLSNKADE 486
Query: 97 ---------------------EQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWS 135
+Q+LGNWQL R+V FKF ++AG VT+W+
Sbjct: 487 VRGDAARRPGCLTPAAPVCPQDQALGNWQLKRQVGTGAPIVFKFPLKFSLKAGQRVTIWA 546
Query: 136 FNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
G + PP ++V K+Q +G+GD + T L++ G+
Sbjct: 547 AGA-GRSPSPPSDLVWKSQASWGTGDVLHTTLISASGQ 583
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL++ + R T++++L+ + KELED + E+ R+ + E+ +++
Sbjct: 300 ELQQIRVRLESTSTQLSQLQKQLAAREAKIKELEDGLSLERDTTRRLLGDKDKEMAQMRQ 359
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
M +QL +Y+EL+++K+ LD+EI YR L+E EE
Sbjct: 360 RMQQQLDEYQELLDVKLALDMEICAYRKLLEGEE 393
>gi|449671174|ref|XP_002166189.2| PREDICTED: lamin Dm0-like [Hydra magnipapillata]
Length = 694
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 11/147 (7%)
Query: 35 GTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG 94
TP RGS + ++ +E + V ++A G++EI E D D KFV+L N
Sbjct: 530 STPPRGSTSKRGTKRSRADDEEQP--------HVENNAIGSIEIAECDSDAKFVRLINNS 581
Query: 95 SEEQSLGNWQLVRKVQG--EVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMK 152
+++ LG W + R V G E +KF ++ TVT+WS N G +PP + V+K
Sbjct: 582 DKDEPLGGWSVQRIVDGKDEQAVEYKFTPKFVLKGKQTVTIWSQN-SGVKQKPPTDFVLK 640
Query: 153 NQKFGSGDEISTILLNTDGELANQERI 179
+ + G ++T L+N D E+ + I
Sbjct: 641 QEDWSHGSSMATSLINPDAEIVAKHTI 667
>gi|390355708|ref|XP_781804.3| PREDICTED: lamin-A-like, partial [Strongylocentrotus purpuratus]
Length = 316
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 36 TPSRGSVAPSKKRKLNILEEYESEERTSSGFQVT--SSAKGNMEITEVDPDGKFVKLYNK 93
TP R P K+R++N QVT S+ G + I E D DG F+KL+N
Sbjct: 169 TPPREQPQP-KRRRIN------------DEVQVTRSSTTSGLVSIVETDNDGNFIKLHNH 215
Query: 94 GSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKN 153
+QS+G W+L R V G + +F F+ + G VT+W+ PP ++V K+
Sbjct: 216 TDSDQSIGGWELQRIVDGGLVATFTFNNRFSMNPGHEVTIWASGSGNKVQNPPSDVVSKD 275
Query: 154 -QKFGSGDEISTILLNTDGEL 173
+ + GD T+L+ DGE+
Sbjct: 276 TENWTKGDSTETLLVRPDGEV 296
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 211 LRAANYRLTERNKELEDQIEYEQ----SKFARMEAEIKRLQTEMTEQLKDYRELMEIKIN 266
++ N L R +LE Q+ E+ +R + EI+ ++ + +++ Y +L++IK+
Sbjct: 77 VKDQNDTLVARIMDLEAQLRKEREAHVDALSRRDLEIEEVKETVAVRVQKYNDLLQIKLR 136
Query: 267 LDVEIAQYRNLMEAEESSL 285
LD EIA +R L+E E+ L
Sbjct: 137 LDKEIATFRALLEGGEARL 155
>gi|74268797|emb|CAJ28141.1| lamin A/C [Sus scrofa]
Length = 92
Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/93 (41%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 81 VDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEG 140
VD +GKFV+L NK +E+QS+GNWQ+ R+ + +++F ++AG VT+W+ G
Sbjct: 1 VDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-G 59
Query: 141 ATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
ATH PP ++V K+Q +G G+ + T L+N+ GE
Sbjct: 60 ATHSPPADLVWKSQNTWGCGNSLRTALINSTGE 92
>gi|32452113|emb|CAD38130.1| lamin type B [Acipenser baerii]
Length = 590
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
SS+ G + + E+D +G FVKL N E+Q LG W L R + +KF + +G
Sbjct: 438 SSSSGPVSVDELDLEGNFVKLRNNSEEDQPLGGWMLKRNLLSVSDVVYKFPSRFVLRSGQ 497
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGELANQERIIDNLR 184
TVT+W+ N G + PP ++V K++ +G+GD I +L+N++ E + ++ LR
Sbjct: 498 TVTIWASNT-GVSPNPPSDLVWKSETTWGTGDNIRIVLMNSNKEEIAERTLVRILR 552
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQS----KFARMEAEIKRLQT 248
EL +K R +++ + N L + +E ED ++ E+ + + E+ ++
Sbjct: 301 ELMGSKMRLETLSSQLGHYQEQNVALETKLREAEDALDREREISHRRLTEKDREMTEMRR 360
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M QL++Y L+++K+ LD+EI YR ++E EE L
Sbjct: 361 QMQTQLEEYEHLLDVKLALDMEINAYRKMLEGEEQRL 397
>gi|390351187|ref|XP_789168.3| PREDICTED: lamin-A-like [Strongylocentrotus purpuratus]
Length = 516
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 16/152 (10%)
Query: 25 VSGAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVT--SSAKGNMEITEVD 82
+ G + TP R P K+R++N QVT S+ G + I E D
Sbjct: 349 LEGGEARKRVCTPPREQPQP-KRRRVN------------DEVQVTRSSTTSGLVSIIETD 395
Query: 83 PDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGAT 142
DG ++KL+N QS+G W+L R V G + +F F+ + G VT+W+
Sbjct: 396 NDGNYIKLHNHTDSNQSIGGWELQRIVDGGLVATFTFNNRFSMNPGHEVTIWASGSGNKV 455
Query: 143 HEPPHNIVMKN-QKFGSGDEISTILLNTDGEL 173
PP ++V K+ + + GD T+L+ DGE+
Sbjct: 456 QNPPSDVVSKDTENWTKGDSTETLLVRPDGEV 487
>gi|4886558|emb|CAB43352.1| lamin [Tealia sp.]
Length = 524
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 10/171 (5%)
Query: 3 VVFETRIEEVQKKRKTELLCMNVSGAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERT 62
V + I +K + E +N++ S GTP G KR E T
Sbjct: 326 VALDMEISAYRKMLEGEEYRLNITPPSSPVFVGTPGSGKSRRGAKRA--------RTEET 377
Query: 63 SSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRT 122
S T++A+G ++I E +P+GKF+KL+N G +++ LG W + R+V E +KF
Sbjct: 378 ESTVTTTTTAEGAIQIVESNPEGKFIKLFNSGDKDEPLGGWTIQRQVGKEDPIVYKFTPK 437
Query: 123 LKIEAGGTVTVWSFNVEGATHEPPHNIVMKN-QKFGSGDEISTILLNTDGE 172
++ VT++S + G H+PP ++ K+ +GSG+E+ T L+N GE
Sbjct: 438 YVLKGDSYVTIYSSDG-GGQHKPPAELLYKHLSSWGSGNEVRTALINASGE 487
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 65/111 (58%), Gaps = 10/111 (9%)
Query: 184 RKEQSSLLLELKE-TKGRSGKYDT---EMNELRAANYRLTERNKELE-----DQIEYEQS 234
R++ +S++ +L+E + S DT E+N+ A N L +R +L+ D+ + + +
Sbjct: 237 REKDTSVIAKLREENRNLSSDVDTNSSELNQELAKNKALGQRVSDLQGLRTQDKKKADDA 296
Query: 235 KFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
R E EI L+T + + LKDY +LM +K+ LD+EI+ YR ++E EE L
Sbjct: 297 ILLR-ENEILELRTSIDDALKDYEDLMGVKVALDMEISAYRKMLEGEEYRL 346
>gi|324503259|gb|ADY41419.1| Lamin-1 [Ascaris suum]
Length = 590
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 64 SGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTL 123
S ++ + EI DG+FV+L NK +++ S+G W ++ + E + +KFH
Sbjct: 457 SAYKTKVHPQCEFEIDAHSGDGQFVRLVNKSNKDVSIGKWS-IKSLANEREIVYKFHPRQ 515
Query: 124 KIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDG-ELANQERI 179
I+AG +VTVWS G PP +VMK Q++ +GD + T+L++ G E A ERI
Sbjct: 516 TIKAGNSVTVWSAG-SGKKSAPPSCLVMKKQQWPTGDHVRTVLVDPAGMEKATFERI 571
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 224 ELEDQIEY-EQSKFARM---EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLME 279
+LE Q+ + E AR+ +A I LQ E+ L +Y++L+ +K+ LD E+ Y L+E
Sbjct: 335 DLESQLRFVENDTNARVQERDARIAELQQEIDRMLSEYKDLLGLKVQLDTELRAYETLLE 394
Query: 280 AEESSL 285
EES L
Sbjct: 395 GEESRL 400
>gi|38047699|gb|AAR09752.1| similar to Drosophila melanogaster LamC, partial [Drosophila
yakuba]
Length = 132
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 67/99 (67%), Gaps = 4/99 (4%)
Query: 86 KFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEP 145
+F+KL+NKG+EE +L WQL R + G+ + +FKF R K+ G +VT+WS + G H+P
Sbjct: 1 RFIKLHNKGTEEINLTGWQLTR-IAGDEELAFKFSRGSKVLGGASVTIWSVDA-GTAHDP 58
Query: 146 PHNIVMKNQKFGSGDEISTILLNTDGE-LANQERIIDNL 183
P+N+VMK +K+ + + ++L N D E +A+ +R+ N+
Sbjct: 59 PNNLVMK-KKWPVANSMRSVLANADKEDVASYDRVRANV 96
>gi|405954851|gb|EKC22176.1| Intermediate filament tail domain-containing protein 1 [Crassostrea
gigas]
Length = 1071
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 68 VTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEA 127
TSSA G+++I EV+ +GK+V+L N G +E G + + V G ++F K A
Sbjct: 766 ATSSAVGDIKILEVNQEGKYVRLVNDGKQEAEFGGHMIQQNVGGHPVAVYRFPPRTKFPA 825
Query: 128 GGTVTVWSFNVEGATHEPPHNIVMK-NQKFGSGDEISTILLNTDGE 172
T+TVW+ + + H+PP + V K QK+G+G E +TIL +G+
Sbjct: 826 NSTLTVWAGSNDPILHQPPSDYVWKEQQKWGTGPECTTILCKPNGQ 871
>gi|321461776|gb|EFX72804.1| lamin-like protein [Daphnia pulex]
Length = 472
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 74/130 (56%), Gaps = 7/130 (5%)
Query: 53 LEEYESEERTSSGF---QVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQS-LGNWQLVRK 108
LE E +S+ F + S N++I EV DGKF++L NK EE+ L W LV +
Sbjct: 325 LEVAPHAECSSNAFYDLSINFSPTANIKIDEVASDGKFIRLINKSEEEEVFLSAWSLVHE 384
Query: 109 VQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLN 168
+ +T +KFHR +K+ GGT+ ++ ++ G HEPP +VM Q++ + E+ T L +
Sbjct: 385 TPKD-RTVYKFHRGIKVAPGGTLCLFFLDM-GQKHEPPSTLVMDKQRWYTDHEMVTRLYD 442
Query: 169 -TDGELANQE 177
+ E+A QE
Sbjct: 443 EKEMEIAKQE 452
>gi|432853400|ref|XP_004067688.1| PREDICTED: lamin-B2-like [Oryzias latipes]
Length = 579
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
+++ G++ I D DG VKL N+ ++Q LG+W+L R+V + +KF ++AG
Sbjct: 437 ATSTGSVSICPTDMDGTSVKLTNETDQDQPLGSWRLRRQVDNGEEVVYKFSPKFVLKAGQ 496
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+VTVWS + G H PP ++ K+Q +G+G I T L+++ GE
Sbjct: 497 SVTVWSADA-GKPHNPPSELLWKSQASWGTGSTIVTSLIDSSGE 539
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL+E++ R +++ L+ +R +ELE+ + E+ + R E E+ L+
Sbjct: 291 ELQESRSRIESLSYQLSSLQKQVGTSEDRIRELEEILSAERDRHRRAMERKEQEMSELRE 350
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M QL +Y+EL+++K+ LDVEI YR L+E EE L
Sbjct: 351 GMDAQLSEYQELLDVKLALDVEINAYRKLLEGEEHRL 387
>gi|260783332|ref|XP_002586730.1| hypothetical protein BRAFLDRAFT_121709 [Branchiostoma floridae]
gi|229271853|gb|EEN42741.1| hypothetical protein BRAFLDRAFT_121709 [Branchiostoma floridae]
Length = 593
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 82 DPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEG 140
D +GKFVKL N +E + S+G W L R V G + S+KF ++AG +VTVW+ G
Sbjct: 454 DLEGKFVKLQNTSAEKDMSMGGWLLKRTVGGGEEISYKFPSRYVLKAGQSVTVWATEG-G 512
Query: 141 ATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
TH PP +++ + Q +GSGD+ T+L+N GE
Sbjct: 513 GTHSPPSDLLFRGQASWGSGDDTKTLLVNDSGE 545
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 63/102 (61%), Gaps = 7/102 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQI----EYEQSKFARMEAEIKRLQT 248
E++E++ R ++++ L+ N L R KELE + E +S + E EI++L+
Sbjct: 308 EMRESRARIDSLMSQVSGLQGQNASLEARCKELEGMMARMSEESRSSAEQYEREIRQLRE 367
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL---PT 287
E+++ + DY+ELM+IKI LD+EI+ YR L+E EE L PT
Sbjct: 368 EISQMMVDYQELMDIKIALDLEISAYRTLLEGEEQRLKLTPT 409
>gi|784940|emb|CAA60046.1| cytoplasmic intermediate filament protein [Ascaris lumbricoides]
Length = 633
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
TSS T SAKGN+ I E PDGK++ L N S+E+ +G W+L RK+ G+ + +
Sbjct: 508 TSSRTSYTRSAKGNVSIQETSPDGKYIVLENTHRSKEEPIGEWKLKRKIDGKKEIVYTLP 567
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+ ++ V +W+ +G H PP ++ + + FG G + TIL N +GE
Sbjct: 568 KDFILKPCKHVKIWARG-QGGIHAPPEQLIFEGEDSFGVGSNVQTILYNREGE 619
>gi|324507899|gb|ADY43340.1| Intermediate filament protein ifa-1 [Ascaris suum]
Length = 578
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
TSS T SAKGN+ I E PDGK++ L N S+E+ +G W+L RK+ G+ + +
Sbjct: 453 TSSRTSYTRSAKGNVSIQETSPDGKYIVLENTHRSKEEPIGEWKLKRKIDGKKEIVYTLP 512
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+ ++ V +W+ +G H PP ++ + + FG G + TIL N +GE
Sbjct: 513 KDFILKPCKHVKIWARG-QGGIHAPPEQLIFEGEDSFGVGSNVQTILYNREGE 564
>gi|940941|gb|AAA74283.1| circulating antigen [Onchocerca volvulus]
Length = 538
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 60 ERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFK 118
E +S T S KGN+ I E PDGKF+ L N S+E+ +G W+L RK+ G+ + +
Sbjct: 411 ETSSQTRSYTRSEKGNVSIQETSPDGKFIVLENTHRSKEELIGEWKLKRKIDGKREIVYT 470
Query: 119 FHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
R ++ TV +W +G H PP ++ + ++ FG G + TIL N +GE
Sbjct: 471 LPRDFILKPSKTVKIWGRG-QGGVHAPPEQLIFEAEESFGMGSNVQTILYNKEGE 524
>gi|17506429|ref|NP_492371.1| Protein LMN-1 [Caenorhabditis elegans]
gi|46576888|sp|Q21443.2|LMN1_CAEEL RecName: Full=Lamin-1; AltName: Full=Ce-lamin; AltName:
Full=CeLam-1; Flags: Precursor
gi|3875347|emb|CAB09411.1| Protein LMN-1 [Caenorhabditis elegans]
Length = 566
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + I EVD +GK+V++ N EEQS+G ++LV K G + SF+F +K+ + TV
Sbjct: 445 GPVGIDEVDEEGKWVRVANNSEEEQSIGGYKLVVKA-GNKEASFQFSSRMKLAPHASATV 503
Query: 134 WSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
WS + GA H PP VMK Q++ GD S L +++G+
Sbjct: 504 WSADA-GAVHHPPEVYVMKKQQWPIGDNPSARLEDSEGD 541
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
Q K +A I L E+ + ++ +L+++KI LD E+ Y+ L+E EE L
Sbjct: 335 QEKLDDKDARIAELNQEIERMMSEFHDLLDVKIQLDAELKTYQALLEGEEERL 387
>gi|444727967|gb|ELW68438.1| Lamin-B1 [Tupaia chinensis]
Length = 1097
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 36/142 (25%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQ----------------------- 110
GN+ I E+D DGKF++L N ++Q +G W+++RK+
Sbjct: 916 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKIGDTSVTYKYTSRYVLKAGQTVTDQ 975
Query: 111 -----------GEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGS 158
G+ ++K+ ++AG TVT+W+ N G T PP +++ KNQ +G+
Sbjct: 976 PMGGWEMIRKIGDTSVTYKYTSRYVLKAGQTVTIWAANA-GVTASPPTDLIWKNQNSWGT 1034
Query: 159 GDEISTILLNTDGELANQERII 180
G+++ IL N+ GE Q +
Sbjct: 1035 GEDVKVILKNSQGEEVAQRSTV 1056
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 768 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDMLAKERDNSRRMLSDKEREMAEIRD 827
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 828 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 864
>gi|308500081|ref|XP_003112226.1| CRE-LMN-1 protein [Caenorhabditis remanei]
gi|308268707|gb|EFP12660.1| CRE-LMN-1 protein [Caenorhabditis remanei]
Length = 603
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 15/132 (11%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + I EVD +GK+V++ N EEQS+G ++LV K G + SF+F +K++A + TV
Sbjct: 482 GPVGIDEVDEEGKWVRVANNSDEEQSIGGFKLVVKA-GNKEASFQFSSRMKLQAHASATV 540
Query: 134 WSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGELANQERIIDNLRKEQSSLLLE 193
WS GA H PP VMK Q++ G+ S L +++G+ SS+ +E
Sbjct: 541 WSAE-SGAVHSPPDTYVMKKQQWPIGENPSARLEDSEGDTV-------------SSITVE 586
Query: 194 LKETKGRSGKYD 205
L E+ S D
Sbjct: 587 LSESSDPSDPAD 598
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 213 AANYRLTER-NKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEI 271
+ N L ER ELE Q K +A I L E+ + ++ +L+++KI LD E+
Sbjct: 350 SGNASLIERLRSELETLKRSFQEKLDDKDARISELNQEIERMMSEFHDLLDVKIQLDSEL 409
Query: 272 AQYRNLMEAEESSL 285
Y+ L+E EE L
Sbjct: 410 KTYQALLEGEEERL 423
>gi|25149990|ref|NP_741902.1| Protein IFA-1, isoform a [Caenorhabditis elegans]
gi|46576376|sp|P90901.2|IFA1_CAEEL RecName: Full=Intermediate filament protein ifa-1; AltName:
Full=Cel IF A1; AltName: Full=Intermediate filament
protein A1; Short=IF-A1
gi|22265779|emb|CAA90365.3| Protein IFA-1, isoform a [Caenorhabditis elegans]
Length = 575
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T+S SAKGN+ I E PDGKF+ L N ++++++G W+L R++ G+ + +
Sbjct: 453 TASRQSFQRSAKGNVSIHEASPDGKFIVLQNTHRAKDEAIGEWKLKRRIDGKRENVYTLP 512
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
R + AG T+ +++ N +G P + FGSG+ + TIL N +GE
Sbjct: 513 RDFVLRAGKTLKIFARN-QGVASPPDQLVYDAEDSFGSGNNVQTILFNKEGE 563
>gi|443712166|gb|ELU05588.1| hypothetical protein CAPTEDRAFT_107687 [Capitella teleta]
Length = 129
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Query: 71 SAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGT 130
S+ GN+ I EV PDGK+++L+N +++ LG + + + V G F+F ++ A T
Sbjct: 26 SSTGNIRIMEVHPDGKYIRLHNTSTKDDDLGGYMIQQNVGGHPVAIFRFPTRVRFPANAT 85
Query: 131 VTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGEL 173
TVW+ + + H+PP + + K Q K+G+G E ++IL + ++
Sbjct: 86 ATVWAGSNDPLLHQPPSDFIFKEQLKWGTGPECTSILCKPNNQV 129
>gi|133901976|ref|NP_001076764.1| Protein IFA-1, isoform c [Caenorhabditis elegans]
gi|112982597|emb|CAL36494.1| Protein IFA-1, isoform c [Caenorhabditis elegans]
Length = 567
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T+S SAKGN+ I E PDGKF+ L N ++++++G W+L R++ G+ + +
Sbjct: 445 TASRQSFQRSAKGNVSIHEASPDGKFIVLQNTHRAKDEAIGEWKLKRRIDGKRENVYTLP 504
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
R + AG T+ +++ N +G P + FGSG+ + TIL N +GE
Sbjct: 505 RDFVLRAGKTLKIFARN-QGVASPPDQLVYDAEDSFGSGNNVQTILFNKEGE 555
>gi|25149995|ref|NP_741903.1| Protein IFA-1, isoform b [Caenorhabditis elegans]
gi|22265780|emb|CAD44129.1| Protein IFA-1, isoform b [Caenorhabditis elegans]
Length = 575
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T+S SAKGN+ I E PDGKF+ L N ++++++G W+L R++ G+ + +
Sbjct: 453 TASRQSFQRSAKGNVSIHEASPDGKFIVLQNTHRAKDEAIGEWKLKRRIDGKRENVYTLP 512
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
R + AG T+ +++ N +G P + FGSG+ + TIL N +GE
Sbjct: 513 RDFVLRAGKTLKIFARN-QGVASPPDQLVYDAEDSFGSGNNVQTILFNKEGE 563
>gi|392927298|ref|NP_001257139.1| Protein IFA-1, isoform d [Caenorhabditis elegans]
gi|313006888|emb|CBI83234.1| Protein IFA-1, isoform d [Caenorhabditis elegans]
Length = 592
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T+S SAKGN+ I E PDGKF+ L N ++++++G W+L R++ G+ + +
Sbjct: 470 TASRQSFQRSAKGNVSIHEASPDGKFIVLQNTHRAKDEAIGEWKLKRRIDGKRENVYTLP 529
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
R + AG T+ +++ N +G P + FGSG+ + TIL N +GE
Sbjct: 530 RDFVLRAGKTLKIFARN-QGVASPPDQLVYDAEDSFGSGNNVQTILFNKEGE 580
>gi|1848063|emb|CAA50182.1| Cytoplasmic intermediate filament (IF) protein [Caenorhabditis
elegans]
Length = 592
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T+S SAKGN+ I E PDGKF+ L N ++++++G W+L R++ G+ + +
Sbjct: 470 TASRQSFQRSAKGNVSIHEASPDGKFIVLQNTHRAKDEAIGEWKLKRRIDGKRENVYTLP 529
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
R + AG T+ +++ N +G P + FGSG+ + TIL N +GE
Sbjct: 530 RDFVLRAGKTLKIFARN-QGVASPPDQLVYDAEDSFGSGNNVQTILFNKEGE 580
>gi|450496|emb|CAA52188.1| lamin [Caenorhabditis elegans]
Length = 566
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + I EVD +GK+V++ N EEQS+G ++LV K G + SF+F +K+ + TV
Sbjct: 445 GPVGIDEVDEEGKWVRVANNSEEEQSIGGYKLVVKA-GNKEASFQFSSRMKLAPHRSATV 503
Query: 134 WSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
WS + GA H PP VMK Q++ GD S L +++G+
Sbjct: 504 WSADA-GAVHHPPEVYVMKKQQWPIGDNPSARLEDSEGD 541
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
Q K +A I L E+ + ++ +L+++KI LD E+ Y+ L+E EE L
Sbjct: 335 QEKLDDKDARIAELNQEIERMMSEFHDLLDVKIQLDAELKTYQALLEGEEERL 387
>gi|198431167|ref|XP_002120583.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 932
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
Query: 69 TSSAKGNMEITEVDPDGKFVKLYN-KGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEA 127
T+SA G+M++ +VD +G FV+++N ++E+ +G + L + V G F+F +++
Sbjct: 611 TASATGSMKLVQVDENGDFVRVHNTSATKEEEIGGFLLQQNVAGHPVAVFRFPPRTRLQP 670
Query: 128 GGTVTVWSFNVEGATHEPPHNIVMKN-QKFGSGDEISTILLNTDGE 172
G + TVWS N H+PP + + K K+G+G E +TIL +G+
Sbjct: 671 GHSATVWSNNSLNGAHDPPTHYLWKQLDKWGTGPECTTILCRPNGQ 716
>gi|268579255|ref|XP_002644610.1| C. briggsae CBR-IFA-4 protein [Caenorhabditis briggsae]
Length = 527
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHR 121
T+S + SAKGN+ I EV+P GKF+ L N ++++G+W+L RK+ G+ + + F R
Sbjct: 407 TTSHSSYSRSAKGNVSIQEVEPTGKFIILENIARRDENIGDWKLRRKIAGKREIVYTFPR 466
Query: 122 TLKIEAGGTVTVWSFNVEGATHEPPHNIVMK-NQKFGSGDEISTILLNTDGE 172
+ A V + F H PP ++V FG+G+++ T L N +GE
Sbjct: 467 EFVLRAQKNVKI--FARGQGIHSPPDSLVFDLEDSFGTGNDVVTTLYNKEGE 516
>gi|400698|sp|P31732.1|OV71_ONCVO RecName: Full=Muscle cell intermediate filament protein OV71
gi|9771|emb|CAA48561.1| Ov71 muscle cell intermediate filament [Onchocerca volvulus]
Length = 432
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T+S SAKGN+ I + DGKF+ L N S+E+ +G W+L RK+ G+ + + F
Sbjct: 308 TASRTSFQRSAKGNVSIQDASSDGKFILLENTHRSKEEPIGEWRLKRKIDGKREIVYTFP 367
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
R ++ G TV +W+ + PP +V + FG G + TIL N +GE
Sbjct: 368 RDFILKPGKTVKIWARG--QGVYSPPDQLVFDAEDSFGVGSNVQTILFNKEGE 418
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 10/104 (9%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
+ LR + S L +L + +GR+ + +M EL NY+L + DQ YE + R
Sbjct: 182 VKRLRVQLSDLRGKLADLEGRNSLLEKQMQEL---NYQLED------DQRSYEAALNDR- 231
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES 283
+A+I++++ E + + + L++ K LD EIA YR ++E EE+
Sbjct: 232 DAQIRKMREECQALMMELQMLLDTKQTLDAEIAIYRKMLEGEEN 275
>gi|453232797|ref|NP_508836.5| Protein IFA-4 [Caenorhabditis elegans]
gi|1848062|emb|CAA50181.1| Cytoplasmic intermediate filament (IF) protein [Caenorhabditis
elegans]
gi|412984004|emb|CCD72670.2| Protein IFA-4 [Caenorhabditis elegans]
Length = 575
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHR 121
T+S + SAKGN+ I E +P GK++ L N ++++G+W+L RK+ G+ + F F R
Sbjct: 454 TTSHSSYSRSAKGNIAIQEAEPSGKYIVLENISRRDENIGDWKLRRKIAGKREIVFTFPR 513
Query: 122 TLKIEAGGTVTVWSFNVEGATHEPPHNIVMK-NQKFGSGDEISTILLNTDGE 172
+ A +V + F H PP ++V FG+G+++ T L N +GE
Sbjct: 514 EFTLRAQKSVKI--FARGQGVHSPPDSLVYDLEDSFGTGNDVVTTLYNKEGE 563
>gi|538257|gb|AAA21472.1| intermediate filament protein, partial [Onchocerca volvulus]
Length = 542
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 65/118 (55%), Gaps = 8/118 (6%)
Query: 57 ESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKT 115
E+ RTS FQ SAKGN+ I + DGKF+ L N S+E+ +G W+L RK+ G+ +
Sbjct: 417 ETANRTS--FQ--RSAKGNVSIQDASSDGKFILLENTHRSKEEPIGEWRLKRKIDGKREV 472
Query: 116 SFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
+ F R ++ G TV +W+ + PP +V + FG G + TIL N +GE
Sbjct: 473 VYTFPRDFILKPGKTVKIWARG--QGVYSPPDQLVFDAEDSFGVGSNVQTILFNKEGE 528
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 10/104 (9%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
+ LR + S L +L + +GR+ + +M EL NY+L + DQ YE + R
Sbjct: 292 VKRLRVQLSDLRGKLADLEGRNSLLEKQMQEL---NYQLED------DQRSYEAALNDR- 341
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES 283
+A+I++++ E + + + L++ K LD EIA YR ++E EE+
Sbjct: 342 DAQIRKMREECQALMMELQMLLDTKQTLDAEIAIYRKMLEGEEN 385
>gi|556343|gb|AAC41561.1| intermediate filament protein [Onchocerca volvulus]
gi|914120|gb|AAB34380.1| OVIF [Onchocerca volvulus]
Length = 613
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 65/118 (55%), Gaps = 8/118 (6%)
Query: 57 ESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKT 115
E+ RTS FQ SAKGN+ I + DGKF+ L N S+E+ +G W+L RK+ G+ +
Sbjct: 488 ETANRTS--FQ--RSAKGNVSIQDASSDGKFILLENTHRSKEEPIGEWRLKRKIDGKREV 543
Query: 116 SFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+ F R ++ G TV +W+ + PP +V + FG G + TIL N +GE
Sbjct: 544 VYTFPRDFILKPGKTVKIWARG--QGVYSPPDQLVFDAEDSFGVGSNVQTILFNKEGE 599
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 10/104 (9%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
+ LR + S L +L + +GR+ + +M EL NY+L + DQ YE + R
Sbjct: 363 VKRLRVQLSDLRGKLADLEGRNSLLEKQMQEL---NYQLED------DQRSYEAALNDR- 412
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES 283
+A+I++++ E + + + L++ K LD EIA YR ++E EE+
Sbjct: 413 DAQIRKMREECQALMMELQMLLDTKQTLDAEIAIYRKMLEGEEN 456
>gi|11863730|emb|CAC18814.1| Lamin B2 protein [Oncorhynchus mykiss]
Length = 152
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPP 146
V L N ++QSLG+W+L R++ + ++KF ++AG TVTVWS + G +H PP
Sbjct: 2 IVTLKNDSDKDQSLGSWRLQRQIGEGEEITYKFSPKFVLKAGKTVTVWSSDA-GVSHSPP 60
Query: 147 HNIVMKNQ-KFGSGDEISTILLNTDGE 172
+++ K+Q +G+GD+I+T L+N+DGE
Sbjct: 61 SDLLWKSQASWGTGDDITTTLVNSDGE 87
>gi|353526233|sp|P90900.2|IFA4_CAEEL RecName: Full=Intermediate filament protein ifa-4; AltName:
Full=Cel IF A4; AltName: Full=Intermediate filament
protein A4; Short=IF-A4
Length = 577
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHR 121
T+S + SAKGN+ I E +P GK++ L N ++++G+W+L RK+ G+ + F F R
Sbjct: 456 TTSHSSYSRSAKGNIAIQEAEPSGKYIVLENISRRDENIGDWKLRRKIAGKREIVFTFPR 515
Query: 122 TLKIEAGGTVTVWSFNVEGATHEPPHNIVMK-NQKFGSGDEISTILLNTDGE 172
+ A +V + F H PP ++V FG+G+++ T L N +GE
Sbjct: 516 EFTLRAQKSVKI--FARGQGVHSPPDSLVYDLEDSFGTGNDVVTTLYNKEGE 565
>gi|326926789|ref|XP_003209579.1| PREDICTED: lamin-L(III)-like [Meleagris gallopavo]
Length = 595
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 63 SSGFQVT--SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFH 120
S+GF+ +S+ G + I E+D DG FVKL N E+Q L W L R ++ ++KF
Sbjct: 441 STGFKTVQHASSSGKVSIEEIDADGNFVKLKNNSDEDQPLHGWVLRRHLESVSDVTYKFP 500
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERI 179
++AG VTVW P +++ K+QK +GSG I L+ +GE + ++
Sbjct: 501 SQFTLQAGQVVTVW--GAAAGVSPGPSDLIWKSQKSWGSGYNIGVTLITDEGEELAERKL 558
Query: 180 IDNLRKEQS 188
+ R+E+S
Sbjct: 559 MYVPREEES 567
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQS----KFARMEAEIKRLQT 248
ELKETK R G +E+N+ R+ N L R KEL+D I+ ++ + A E E+ + Q
Sbjct: 307 ELKETKLRIGNLTSEINQYRSQNAALENRVKELQDMIDKDRDLHRKRMAEKEREMAQAQN 366
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++ EQL++Y L+++K+ LD+EI YR ++E EE L
Sbjct: 367 KIQEQLEEYEHLLDVKLALDLEINAYRKMLEGEEQRL 403
>gi|7447207|pir||T16562 hypothetical protein K05B2.3 - Caenorhabditis elegans
Length = 560
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHR 121
T+S + SAKGN+ I E +P GK++ L N ++++G+W+L RK+ G+ + F F R
Sbjct: 439 TTSHSSYSRSAKGNIAIQEAEPSGKYIVLENISRRDENIGDWKLRRKIAGKREIVFTFPR 498
Query: 122 TLKIEAGGTVTVWSFNVEGATHEPPHNIVMK-NQKFGSGDEISTILLNTDGE 172
+ A +V + F H PP ++V FG+G+++ T L N +GE
Sbjct: 499 EFTLRAQKSVKI--FARGQGVHSPPDSLVYDLEDSFGTGNDVVTTLYNKEGE 548
>gi|125959|sp|P10999.2|LAML3_XENLA RecName: Full=Lamin-L(III); AltName: Full=Lamin-B3; Flags:
Precursor
gi|50604020|gb|AAH78034.1| LOC397910 protein [Xenopus laevis]
Length = 583
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 10/150 (6%)
Query: 30 SSSVAGTPSRGSVAPS------KKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDP 83
S S T SR S + + KKRKL+ E S + S +S+ G + + ++DP
Sbjct: 391 SPSQRSTVSRASTSQTSRLLRGKKRKLD--ETGRSVTKRSYKVVQQASSTGPVSVEDIDP 448
Query: 84 DGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATH 143
+G +V+L N E+ SL W + R + +FK +++ VT+W+ GA H
Sbjct: 449 EGNYVRLLNNTEEDFSLHGWVVKRMHMSLPEIAFKLPCRFILKSSQRVTIWAAGA-GAVH 507
Query: 144 EPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
PP ++V K+QK +G+GD I LL++ GE
Sbjct: 508 SPPTDLVWKSQKTWGTGDNIKITLLDSTGE 537
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTE 252
E+ TK R +++N + N L + ++L+D ++ R E R TE+ +
Sbjct: 290 EIMATKLRVDTLSSQLNHYQKQNSALEAKVRDLQDMLDRAHDMHRRQMTEKDREVTEIRQ 349
Query: 253 ----QLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
QL++Y +L+++K+ LD+EI YR ++E EE L
Sbjct: 350 TLQGQLEEYEQLLDVKLALDMEINAYRKMLEGEEQRL 386
>gi|341874271|gb|EGT30206.1| CBN-IFA-1 protein [Caenorhabditis brenneri]
Length = 436
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T+S SAKGN+ I E PDGK++ L N ++++++G W+L R++ G+ + +
Sbjct: 314 TASRQSFQRSAKGNVSIHEASPDGKYIVLQNTHRAKDEAIGEWKLKRRIDGKREIVYTVP 373
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
R + AG T+ +++ N +G P + FGSG+ + TIL N +GE
Sbjct: 374 RDFVLRAGKTLKIFARN-QGVASPPDQLVYDAEDSFGSGNNVQTILFNKEGE 424
>gi|148236667|ref|NP_001081545.1| lamin-L(III) [Xenopus laevis]
gi|64880|emb|CAA31567.1| unnamed protein product [Xenopus laevis]
Length = 583
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 10/150 (6%)
Query: 30 SSSVAGTPSRGSVAPS------KKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDP 83
S S T SR S + + KKRKL+ E S + S +S+ G + + ++DP
Sbjct: 391 SPSQRSTVSRASTSQTSRLLRGKKRKLD--ETGRSVTKRSYKVVQQASSTGPVSVEDIDP 448
Query: 84 DGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATH 143
+G +V+L N E+ SL W + R + +FK +++ VT+W+ GA H
Sbjct: 449 EGNYVRLLNNTEEDFSLHGWVVKRMHMSLPEIAFKLPCRFILKSSQRVTIWAAGA-GAVH 507
Query: 144 EPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
PP ++V K+QK +G+GD I LL++ GE
Sbjct: 508 SPPTDLVWKSQKTWGTGDNIKITLLDSTGE 537
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTE 252
E+ TK R +++N + N L + ++L+D ++ R E R TE+
Sbjct: 290 EIMATKLRVDTLSSQLNHYQKQNSALEAKVRDLQDMLDRAHDMHRRQMTEKDREVTEIRH 349
Query: 253 ----QLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
QL++Y +L+++K+ LD+EI YR ++E EE L
Sbjct: 350 TLQGQLEEYEQLLDVKLALDMEINAYRKMLEGEEQRL 386
>gi|147899049|ref|NP_001089891.1| lamin-L(III) [Xenopus laevis]
gi|80479331|gb|AAI08624.1| MGC131227 protein [Xenopus laevis]
Length = 622
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 14/154 (9%)
Query: 28 AGSSSVAGTPSRGSVAPS------KKRKLNILEEYESEERTSSGFQVT--SSAKGNMEIT 79
+ S S T SR S + KKRKL E T ++V +S+ G + +
Sbjct: 429 SPSPSQRSTVSRASTGQTSRLLRGKKRKL----EETDRSVTKRAYKVVQQASSTGPVSVE 484
Query: 80 EVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVE 139
++DP+G +V+L N E+ SL W + RK SFK +++ VT+W+
Sbjct: 485 DIDPEGNYVRLLNNTEEDFSLHGWVVKRKHMSLPDISFKLPCRFILKSSQHVTIWATGA- 543
Query: 140 GATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
GA H PP ++V K+QK +G+GD I L ++ GE
Sbjct: 544 GAVHTPPTDLVWKSQKTWGTGDNIKITLHDSSGE 577
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQI----EYEQSKFARMEAEIKRLQT 248
E+ TK R +++ + + N L + +EL+D + E + + + E+ ++
Sbjct: 330 EIMATKLRVDMLTSQLGKYQRQNSALEVKVRELQDMLDRAHEVHRRQMTEKDREVTEIRQ 389
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ QL++Y +L+++K+ LD+EI YR ++E EE L
Sbjct: 390 TLQAQLEEYEQLLDVKLALDMEINAYRKMLEGEEQRL 426
>gi|363737573|ref|XP_413842.3| PREDICTED: lamin-L(III)-like [Gallus gallus]
Length = 583
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 5/129 (3%)
Query: 63 SSGFQVT--SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFH 120
S+GF+ +S+ G + I E+D DG FV+L N E+Q L W L R ++ ++KF
Sbjct: 427 SAGFKTVQHASSSGKVSIEEIDADGNFVRLKNNSDEDQPLHGWVLRRHLESVSDVAYKFP 486
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERI 179
++AG VT+W P ++V K+QK +GSG I L+ +GE + ++
Sbjct: 487 SQFTLQAGQVVTIW--GAAAGVSPGPSDLVWKSQKSWGSGFNIGVTLITDEGEELAERKL 544
Query: 180 IDNLRKEQS 188
+ R E+S
Sbjct: 545 MHVPRGEES 553
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQS----KFARMEAEIKRLQT 248
EL ETK R G +E+N ++ N L + KEL++ ++ ++ + A E E+ + Q
Sbjct: 293 ELMETKLRVGNLTSEINHYQSQNAALENKVKELQEMLDKDRDLHRRRMAEKEKEMAQTQK 352
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++ EQL++Y L+++K+ LD+EI YR ++E EE L
Sbjct: 353 KVQEQLEEYEHLLDVKLALDLEINAYRKMLEGEEQRL 389
>gi|341874382|gb|EGT30317.1| CBN-IFA-4 protein [Caenorhabditis brenneri]
Length = 577
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHR 121
T+S + SAKGN+ I EV+P GK++ L N ++++G+W+L RK+ G+ + F F R
Sbjct: 456 TTSHSSYSRSAKGNVVIQEVEPSGKYIILENISRRDENIGDWKLRRKIAGKREIVFTFPR 515
Query: 122 TLKIEAGGTVTVWSFNVEGATHEPPHNIVMK-NQKFGSGDEISTILLNTDGE 172
+ A V + F H PP ++V FG+G+++ T L N +GE
Sbjct: 516 EFSLRAQKNVKI--FARGQGIHSPPDSLVYDLEDTFGTGNDVVTTLYNKEGE 565
>gi|308512563|ref|XP_003118464.1| CRE-IFA-4 protein [Caenorhabditis remanei]
gi|308239110|gb|EFO83062.1| CRE-IFA-4 protein [Caenorhabditis remanei]
Length = 577
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHR 121
T+S + SAKGN+ I EV+P GK++ L N ++++G+W+L RK+ G+ + F F R
Sbjct: 456 TTSHSSYSRSAKGNVVIQEVEPSGKYIVLENISRRDETIGDWKLRRKIAGKREIVFTFPR 515
Query: 122 TLKIEAGGTVTVWSFNVEGATHEPPHNIVMK-NQKFGSGDEISTILLNTDGE 172
+ A V + F H PP ++V FG+G+++ T L N +GE
Sbjct: 516 EFTLRAQKNVKI--FARGQGIHSPPDSLVYDVEDSFGTGNDVVTSLYNKEGE 565
>gi|268578035|ref|XP_002644000.1| C. briggsae CBR-IFA-1 protein [Caenorhabditis briggsae]
Length = 566
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T+S SAKGN+ I E PDGK++ L N ++++++G W+L R++ G+ + +
Sbjct: 444 TASRQSFQRSAKGNVSIHEASPDGKYIVLQNTHRAKDEAIGEWKLKRRIDGKREIVYTVP 503
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
R + AG T+ +++ N +G P + FGSG+ + TIL N +GE
Sbjct: 504 RDFVLRAGKTLKIFARN-QGVASPPDQLVYDAEDSFGSGNNVQTILFNKEGE 554
>gi|347944100|gb|AEP27818.1| Hau-lamin1 [Helobdella sp. Austin]
Length = 603
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 72/120 (60%), Gaps = 4/120 (3%)
Query: 72 AKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTV 131
+KG + + EVD DG+F+K+YN ++ +L W + + +G+ + ++KF R + I+ +
Sbjct: 467 SKGGIHLQEVDVDGRFIKIYNGSDKDINLSGWAITQSTEGQ-EVTYKFMRNVVIKPHHHI 525
Query: 132 TVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDG-ELANQERIIDNLRKEQSSL 190
TVWS + G TH P +IVMKNQ + G+ +++ ++ G ELA +E + R E SL
Sbjct: 526 TVWSQDKTG-THSPS-DIVMKNQSWLKGEHKKSVVTDSYGEELAWKESKKSSFRTESDSL 583
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 61/100 (61%), Gaps = 4/100 (4%)
Query: 192 LELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQ 247
+E+ + K R + E+ +L A R + LE ++ E+ + M EAEI+RL+
Sbjct: 312 MEVHQLKSRIDTLNGEIEKLNAKADNGAARIEYLERMLQQEKDDHSSMLAIKEAEIRRLK 371
Query: 248 TEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
++ +QL++YR+L ++KI LDVEIA Y+ L++ EE+ L +
Sbjct: 372 AQLEDQLQEYRDLFDLKIKLDVEIAAYKKLLDIEETRLQS 411
>gi|28627982|gb|AAN46118.1| intermediate filament protein HG-IF1 [Heterodera glycines]
Length = 580
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
TSS SAKGN+ I E P+GK+V L N S+E+++G W+L R++ G+ + +
Sbjct: 455 TSSRQSYQRSAKGNVSILETSPEGKYVVLENTHRSKEETIGEWKLKRRIDGKREIVYTLP 514
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
+ + VW+ N +G H PP ++ ++ FG G + TIL N GE
Sbjct: 515 ANFVLRPMARLKVWARN-QGGLHAPPDQLIFDGEESFGVGSNVQTILYNAQGE 566
>gi|134085409|ref|NP_001076823.1| lamin B3 [Xenopus (Silurana) tropicalis]
gi|134025811|gb|AAI35751.1| lmnb3 protein [Xenopus (Silurana) tropicalis]
Length = 582
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 82/153 (53%), Gaps = 17/153 (11%)
Query: 30 SSSVAGTPSRGSVAPS------KKRKLNILEEYESEERTSSGFQVT--SSAKGNMEITEV 81
S S T SR S + S KKRKL E T ++V +S+ G + + ++
Sbjct: 391 SPSQRSTVSRASTSQSSRLSRGKKRKL----EETGRSVTKRAYKVVQEASSTGPVSVEDI 446
Query: 82 DPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEV-KTSFKFHRTLKIEAGGTVTVWSFNVEG 140
DP+G +V+L N E+ SL W +VR+ G + + ++K +++ VT+W+ G
Sbjct: 447 DPEGNYVRLLNNTEEDHSLHGW-VVRRKHGSLPEIAYKLPCRFVLKSEQRVTIWAAGA-G 504
Query: 141 ATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
A H PP ++V K+ K +G+GD I ILL++ GE
Sbjct: 505 AVHSPPTDLVWKSHKNWGTGD-IKIILLDSSGE 536
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTE 252
E+ TK R +++++ + N L + +EL+D ++ R E R TE+ +
Sbjct: 290 EIMATKLRVDTLSSQLSQYQKQNSALEAKVRELQDMLDRAHDMHRRQMTEKDREVTEIRQ 349
Query: 253 ----QLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
QL++Y +L+++K+ LD+EI YR ++E EE L
Sbjct: 350 TLQAQLEEYEQLLDVKLALDMEINAYRKMLEGEEQRL 386
>gi|341882071|gb|EGT38006.1| hypothetical protein CAEBREN_12303 [Caenorhabditis brenneri]
Length = 567
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 15/132 (11%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + I EVD +GK+V++ N EEQ++G ++LV K G + SF+F +K+ + TV
Sbjct: 446 GPVGIDEVDEEGKWVRVANNSDEEQTIGGYKLVVKA-GNKEASFQFSSRMKLAPHASATV 504
Query: 134 WSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGELANQERIIDNLRKEQSSLLLE 193
WS GA H PP VMK Q++ G+ S L +++G++ SS+ +E
Sbjct: 505 WSAE-SGAVHNPPEVYVMKKQQWPIGENPSARLEDSEGDIV-------------SSITVE 550
Query: 194 LKETKGRSGKYD 205
L E+ S D
Sbjct: 551 LSESSDPSDPAD 562
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
Q K +A I L E+ + ++ +L+++KI LD E+ Y+ L+E EE L
Sbjct: 336 QEKLDDKDARISELNQEIERMMSEFHDLLDVKIQLDAELKTYQALLEGEEERL 388
>gi|393904819|gb|EJD73807.1| muscle cell intermediate filament protein OV71 [Loa loa]
Length = 481
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Query: 57 ESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKT 115
E+ RTS FQ SAKGN+ I + DGK+V L N S+E+ +G W+L RK+ G+ +
Sbjct: 356 ETASRTS--FQ--RSAKGNISIQDAASDGKYVLLENTHRSKEEPMGEWRLKRKIDGKREI 411
Query: 116 SFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+ F R + G TV VW+ + PP +V + FG G + TIL N +GE
Sbjct: 412 IYTFPRDFILRPGKTVKVWARG--QGVYSPPEQLVFDAEDSFGIGSNVQTILFNKEGE 467
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 10/104 (9%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
+ LR + S L +L + +GR+ + +M EL NY+L + DQ YE + R
Sbjct: 231 VKRLRVQLSDLRGKLADLEGRNSLLEKQMQEL---NYQLED------DQRSYEAALNDR- 280
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES 283
+++I++++ E + + + L++ K LD EIA YR ++E EE+
Sbjct: 281 DSQIRKMREECQALMMELQMLLDTKQTLDAEIAIYRKMLEGEEN 324
>gi|399145793|gb|AFP25101.1| cytovec [Nematostella vectensis]
Length = 760
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Query: 69 TSSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKIEA 127
TSS GN+ I EV+PDG +V+L+N + ++ +G + + + V G T F+F +++A
Sbjct: 478 TSSHTGNVRILEVNPDGNYVRLFNTSAHRDEEIGGYMIQQNVAGRPVTVFRFPPRTRLKA 537
Query: 128 GGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
TVWS + H PP + + K Q K+G+G E +TIL +G+
Sbjct: 538 LSHTTVWSAG-SLSRHNPPSDFLWKEQHKWGTGPECTTILCKPNGQ 582
>gi|308494591|ref|XP_003109484.1| CRE-IFA-1 protein [Caenorhabditis remanei]
gi|308245674|gb|EFO89626.1| CRE-IFA-1 protein [Caenorhabditis remanei]
Length = 567
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T+S SAKGN+ I E PDGK++ L N ++++++G W+L R++ G+ + +
Sbjct: 445 TASRQSFQRSAKGNVSIHEASPDGKYIVLQNTHRAKDEAIGEWKLKRRIDGKREIVYTIP 504
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
+ + AG T+ +++ N A+ PP +V + FGSG+ + TIL N +GE
Sbjct: 505 KDFVLRAGKTLKIFARNQGVAS--PPDQLVYDGEDSFGSGNNVQTILFNKEGE 555
>gi|339251730|ref|XP_003372887.1| muscle cell intermediate filament protein OV71 [Trichinella spiralis]
gi|316968734|gb|EFV52969.1| muscle cell intermediate filament protein OV71 [Trichinella spiralis]
Length = 1640
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 59 EERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSF 117
E T + FQ SAKGN+ I+E D DGKF+ L N + E+++ W++ RK+ G+ + +
Sbjct: 1527 EMSTRTTFQ--RSAKGNVVISECDLDGKFITLENTHRQKEENISEWKIKRKIDGKREVVY 1584
Query: 118 KFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGEL 173
++AG T +W+ + +G T PP+ ++ + +GSG +ST LLN +GE+
Sbjct: 1585 TLPPGTVLKAGKTCKIWARD-QGGTARPPNELIFDAETSWGSGSNVSTTLLNREGEV 1640
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 220 ERNKELED-QIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
E N +LED Q +YE + R +A++++++ E + + + L++ K LD EIA YR ++
Sbjct: 1432 ELNHQLEDDQRQYEMALNDR-DAQLRKMREECHALVSELQALLDTKQMLDAEIAIYRKML 1490
Query: 279 EAEES 283
E EES
Sbjct: 1491 EGEES 1495
>gi|268566151|ref|XP_002639648.1| C. briggsae CBR-LMN-1 protein [Caenorhabditis briggsae]
Length = 565
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 15/132 (11%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + I EVD +GK+V++ N E+QS+G ++LV K G + SF+F +K+ + TV
Sbjct: 444 GPVGIDEVDEEGKWVRVANNSEEDQSIGGYKLVVKA-GNKEASFQFSARMKLAPHASATV 502
Query: 134 WSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGELANQERIIDNLRKEQSSLLLE 193
WS GA H PP VMK Q++ G+ S L + +G++ SS+ +E
Sbjct: 503 WSAE-SGAVHNPPEVYVMKKQQWPIGENPSARLEDNEGDIV-------------SSITVE 548
Query: 194 LKETKGRSGKYD 205
L E+ S D
Sbjct: 549 LSESSDPSDPAD 560
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
Q K +A I L E+ + ++ +L+++KI LD E+ Y+ L+E EE L
Sbjct: 334 QEKLDDKDARISELNQEIERMMSEFHDLLDVKIQLDAELKTYQALLEGEEERL 386
>gi|348499982|ref|XP_003437552.1| PREDICTED: lamin-L(III)-like [Oreochromis niloticus]
Length = 600
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 23 MNVSGAGSSSVAGTPSRGSVAP-SKKRKLNILEEYESEERTSSGFQVTSSA--KGNMEIT 79
++ S + +S+ T S P KKRK YE E +S ++++S + +G + +
Sbjct: 407 LSPSPSQRTSIPRTHEHSSRKPRGKKRK------YEGESGSSPAYKMSSRSMERGAVSVA 460
Query: 80 EVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVE 139
E+D DGK+V+L N +EQSLG W + R G +F + + G T+T+W+ E
Sbjct: 461 EIDVDGKYVRLKNNSEKEQSLGGWVVRRVYPGAGDITFHIPASCVLAGGQTLTIWAAGAE 520
Query: 140 GATHEPPHNIVMKNQK-FGSGDEISTILLNTDGELANQERII 180
P ++V++ + +G ++ ILLN+ E + R+
Sbjct: 521 --VEADPSDLVLQGHRSWGVITDVRVILLNSSHEEVAERRLC 560
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQ----SKFARMEAEIKRLQT 248
EL TK R +++ + R L R ++LE ++ E+ K ++ E E+ ++T
Sbjct: 309 ELDATKVRVETLSSQLQQCRKEKISLENRFQDLERTLDKEREVWHHKLSQKEQELLNMRT 368
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
+M QL+DY LM++K+ LD+EI+ YR ++E EE
Sbjct: 369 QMFSQLEDYEHLMDVKVALDMEISAYRKMLEVEE 402
>gi|4886294|emb|CAB43342.1| Lamin [Astropecten brasiliensis]
Length = 565
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 66 FQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q +S+ G + I E D G F+KL N ++Q+LG W L R+V + S+K +
Sbjct: 429 VQQSSTTTGLVAIIESDLKGNFIKLQNASDQDQALGGWNLKRQVDNGDEISYKLSAKYIL 488
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGEL 173
+AG VT+WS G P ++V K+QK +G+G E+ + L++ GE+
Sbjct: 489 KAGKEVTIWSSG-SGHPQNAPSDLVFKSQKTWGTGKEVVSTLVDASGEV 536
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQ-SKFARM---EAEIKRLQT 248
EL+ + R +E+ +++ N L R K+LE+Q++ EQ + F + + E+++L+
Sbjct: 302 ELRIVRTRVDNLQSELTSIKSQNDALIARIKDLENQLKLEQDNHFDALNDRDKELQQLRD 361
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M QL +Y +LM IK++LD EI YR L+E EE+ L
Sbjct: 362 AMANQLMEYEDLMNIKLSLDTEIKSYRKLLEGEENRL 398
>gi|345321296|ref|XP_003430406.1| PREDICTED: hypothetical protein LOC100092902 [Ornithorhynchus
anatinus]
Length = 908
Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 210 EMNESRRQVQSLTCEVDGLRGTNEALLRQLRELEEQFAVEAGGYQAGAARLEDELRQLKE 269
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 270 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 311
>gi|4886292|emb|CAB43343.1| lamin [Asterias rubens]
Length = 449
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTV 133
G + I E D G F+KL N ++Q LG W L R+V G + ++KF +++G VTV
Sbjct: 347 GLVAILESDLLGNFIKLQNTADQDQPLGGWLLKRQVDGGEELNYKFSSKYVLKSGKEVTV 406
Query: 134 WSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGEL 173
W+ G H PP ++V KNQ +G G E+ L + GE+
Sbjct: 407 WASG-SGHPHSPPTDMVFKNQSTWGVGKEVVNTLTDASGEV 446
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQ-SKFARM---EAEIKRLQT 248
EL+ + + +E+ +++ N L R K+LE+Q++ EQ S F + + E+++L+
Sbjct: 210 ELRIMRTKVDNLQSELTSIKSQNDALISRIKDLENQLKMEQDSHFEALNDRDKELQQLRD 269
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M QL +Y ELM IK++LD EI+ YR L+E EE L
Sbjct: 270 AMANQLMEYEELMNIKLSLDTEISAYRKLLEGEEGRL 306
>gi|226955367|gb|ACO95361.1| muscle-specific intermediate filament desmin (predicted) [Dasypus
novemcinctus]
Length = 470
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES SLP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRISLP 419
>gi|312099151|ref|XP_003149268.1| hypothetical protein LOAG_13714 [Loa loa]
Length = 133
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Query: 57 ESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKT 115
E+ RTS FQ SAKGN+ I + DGK+V L N S+E+ +G W+L RK+ G+ +
Sbjct: 8 ETASRTS--FQ--RSAKGNISIQDAASDGKYVLLENTHRSKEEPMGEWRLKRKIDGKREI 63
Query: 116 SFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+ F R + G TV VW+ + PP +V + FG G + TIL N +GE
Sbjct: 64 IYTFPRDFILRPGKTVKVWARGQ--GVYSPPEQLVFDAEDSFGIGSNVQTILFNKEGE 119
>gi|297669513|ref|XP_002812939.1| PREDICTED: LOW QUALITY PROTEIN: desmin [Pongo abelii]
Length = 478
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 8/104 (7%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESS----LPTY 288
EM L++Y++L+ +K+ LDVEIA YR L+E EES LP Y
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRISLLLPNY 423
>gi|4468706|emb|CAB38182.1| intermediate filament protein IF1 [Sagitta elegans]
Length = 650
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 71 SAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGT 130
S+KG + ITE PDG+FV L NK ++QSL + + RKV + FKF I +G T
Sbjct: 535 SSKGPVAITECCPDGEFVLLENKKGKDQSLDGFCVRRKVDFDADLVFKFPAGFVIPSGST 594
Query: 131 VTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
V VW+ +V A P +V + +G G I T L++ +GE
Sbjct: 595 VKVWA-DVNNAVDNAPFQVVWGGCRSWGVGSNILTTLVSPEGE 636
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFA----RMEAEIKRLQT 248
E+K + + + E++ LR N +L ER LE +++ A +AEI++L+
Sbjct: 367 EVKRARAKYQELQMEISRLRGENAQLLERLAYLEAELDALNKSHALALDDAQAEIEKLRA 426
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++ Q+ + +ELM+ K+ LD EIA YR L+ EES L
Sbjct: 427 QLAAQILELKELMDSKLALDAEIATYRRLLMGEESRL 463
>gi|291232460|ref|XP_002736176.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 803
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 69 TSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEA 127
TSS G ++I E++ DG+FV+L+N +++ G + + + V G ++F + A
Sbjct: 511 TSSFTGTIKILEINQDGRFVRLFNSSPNQDMEFGGFMIQQNVGGHPVAVYRFPPRTRFRA 570
Query: 128 GGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
G T+TVW+ + +G H PP + + K Q K+G G E +TIL G+
Sbjct: 571 GSTITVWAASGQG-KHSPPTDFLWKEQHKWGVGPECTTILCKPTGQ 615
>gi|390350050|ref|XP_796075.3| PREDICTED: prelamin-A/C-like [Strongylocentrotus purpuratus]
Length = 769
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 68 VTSSAKGNMEITEVDPDGKFVKLYN-KGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIE 126
TSSA +++I E++ DGKFV+L+N G+E+ +G + + + + G F+F +
Sbjct: 475 ATSSAVSSLKILEINEDGKFVRLFNASGNEDVEVGGFLIQQNIGGHPVAVFRFPPRTRFR 534
Query: 127 AGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
G +TVW+ + A H PP + + + Q K+G+G E ++IL +G+
Sbjct: 535 PGSVITVWAASSR-AHHNPPTDFLWREQHKWGTGPECTSILCKPNGQ 580
>gi|324502769|gb|ADY41216.1| Intermediate filament protein ifa-1 [Ascaris suum]
Length = 571
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 57 ESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKT 115
E+ RTS FQ SAKGN+ I E DG+++ L N ++++ +G W+L RK+ G+ +
Sbjct: 449 ETASRTS--FQ--RSAKGNVSIQEASADGRYITLQNTHRAKDEPIGEWKLKRKIDGKKEI 504
Query: 116 SFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
+ F + + AG V V++ N +G + P + + FG G + TIL N +GE
Sbjct: 505 VYTFPKEFVLRAGKNVRVFARN-QGVSSPPDQLVCDSEESFGVGSNVQTILYNREGE 560
>gi|312073850|ref|XP_003139705.1| cytoplasmic intermediate filament protein [Loa loa]
Length = 564
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T + FQ SAKGN+ I E DP+GKF+ L N S++++LG +L RK+ + +
Sbjct: 441 TKTTFQ--RSAKGNVTIAECDPNGKFIMLENSHRSKDENLGEHKLRRKLDNRREIVYTIP 498
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
++AG T+ +W+ + +G H PP ++V + +G G + T L+N DG+
Sbjct: 499 PNTVLKAGRTMKIWARD-QGGLHSPPESLVYDGENTWGIGANVVTTLINKDGD 550
>gi|393909086|gb|EFO24363.2| intermediate filament protein B [Loa loa]
gi|393909087|gb|EJD75312.1| intermediate filament protein B, variant [Loa loa]
Length = 505
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T + FQ SAKGN+ I E DP+GKF+ L N S++++LG +L RK+ + +
Sbjct: 382 TKTTFQ--RSAKGNVTIAECDPNGKFIMLENSHRSKDENLGEHKLRRKLDNRREIVYTIP 439
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
++AG T+ +W+ + +G H PP ++V + +G G + T L+N DG+
Sbjct: 440 PNTVLKAGRTMKIWARD-QGGLHSPPESLVYDGENTWGIGANVVTTLINKDGD 491
>gi|126337774|ref|XP_001362548.1| PREDICTED: desmin-like [Monodelphis domestica]
Length = 472
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 322 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEANGYQDNIARLEEEIRHLKD 381
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 382 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 421
>gi|48374063|ref|NP_001001535.1| desmin [Sus scrofa]
gi|6166115|sp|P02540.4|DESM_PIG RecName: Full=Desmin
gi|5669873|gb|AAD46492.1|AF136188_1 desmin [Sus scrofa]
gi|13959069|gb|AAK51087.1|AF363284_1 muscle-specific intermediate filament desmin [Sus scrofa]
Length = 471
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E S + AR+E EI+ L+
Sbjct: 321 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 380
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 381 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 420
>gi|395823387|ref|XP_003784968.1| PREDICTED: desmin [Otolemur garnettii]
gi|202070737|gb|ACH95324.1| desmin (predicted) [Otolemur garnettii]
Length = 470
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 419
>gi|444514911|gb|ELV10666.1| Desmin [Tupaia chinensis]
Length = 469
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 319 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 378
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 379 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 418
>gi|410903223|ref|XP_003965093.1| PREDICTED: lamin-B1-like [Takifugu rubripes]
Length = 584
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 84/155 (54%), Gaps = 9/155 (5%)
Query: 23 MNVSGAGSSSV----AGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEI 78
+ +S + SS V A + SR KRK +EE E+ S ++ G + +
Sbjct: 388 LKLSPSPSSRVTVTRASSSSRSVHTTQGKRKRVEVEEQEASSSVSISHSAAAT--GPVCV 445
Query: 79 TEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNV 138
EVD DGKF+ L+N E+Q++ +++++ + G ++KF ++A VT+W+ +
Sbjct: 446 EEVDTDGKFICLHNTADEDQAMVGYEMIQTI-GNATATYKFTPKYVLKARQKVTIWASDA 504
Query: 139 EGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
G + +PP ++V KN+ + SG+++ +L+N GE
Sbjct: 505 -GVSSKPPTDLVWKNRSSWTSGEDVHVVLVNPQGE 538
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 220 ERNKELEDQIEYEQSKFARMEA----EIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYR 275
+R ELE+ + E++ R+ A E+ + +M E L +Y +L+++K+ LD+EI YR
Sbjct: 319 DRISELEEALMEEKANSRRLLADKDHEVAEIHAKMQEHLNEYEQLLDVKLALDMEINAYR 378
Query: 276 NLMEAEESSL 285
L+E EE L
Sbjct: 379 KLLEGEEERL 388
>gi|284005349|ref|NP_001164952.1| desmin [Oryctolagus cuniculus]
gi|217038313|gb|ACJ76608.1| desmin (predicted) [Oryctolagus cuniculus]
Length = 469
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 319 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 378
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 379 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 418
>gi|344268500|ref|XP_003406096.1| PREDICTED: desmin-like [Loxodonta africana]
Length = 469
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 319 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 378
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 379 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 418
>gi|2959454|dbj|BAA25134.1| desmin [Sus scrofa]
Length = 462
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E S + AR+E EI+ L+
Sbjct: 312 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 371
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 372 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 411
>gi|148667985|gb|EDL00402.1| desmin [Mus musculus]
Length = 493
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 343 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEANGYQDNIARLEEEIRHLKD 402
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM L++Y++L+ +K+ LDVEIA YR L+E EES +
Sbjct: 403 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRI 439
>gi|23194177|gb|AAN15036.1|AF521879_1 mutant desmin [Homo sapiens]
Length = 469
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 62/99 (62%), Gaps = 5/99 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKF---ARMEAEIKRLQTE 249
E+ E + + Y E++ L+ N L + +ELED+ E S + AR+E EI+ L+ E
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDIARLEEEIRHLKDE 379
Query: 250 MTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
M L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 MARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 418
>gi|149524282|ref|XP_001514459.1| PREDICTED: lamin-L(III)-like, partial [Ornithorhynchus anatinus]
Length = 224
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 80/153 (52%), Gaps = 6/153 (3%)
Query: 21 LCMNVSGAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITE 80
L + G S + S+GS K+R+ +L E+ + +A G++ + E
Sbjct: 77 LSPKAASGGRSQGPVSTSQGSRRKKKRRQEALLREHSDSVWPLPCY----AASGSVCVEE 132
Query: 81 VDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEG 140
+D G FV+L N +E+Q L W L R++ ++ +KF L + AG +T+W+ G
Sbjct: 133 IDKRGNFVRLKNNSTEDQPLNGWILRRQLGNLSESIYKFPACLVLAAGQVITIWAAGA-G 191
Query: 141 ATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
+ PP ++V ++QK +G+G+ + L++ +G+
Sbjct: 192 VSPNPPTDLVWESQKSWGAGNFVRITLVSANGD 224
>gi|2959452|dbj|BAA25133.1| desmin [Bos taurus]
Length = 461
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 311 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 370
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 371 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 410
>gi|395527627|ref|XP_003765944.1| PREDICTED: desmin isoform 2 [Sarcophilus harrisii]
Length = 508
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 358 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEANGYQDNIARLEEEIRHLKD 417
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 418 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 457
>gi|403266781|ref|XP_003925539.1| PREDICTED: desmin [Saimiri boliviensis boliviensis]
gi|169731491|gb|ACA64865.1| desmin (predicted) [Callicebus moloch]
Length = 470
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 419
>gi|170590852|ref|XP_001900185.1| cytoplasmic intermediate filament protein [Brugia malayi]
gi|158592335|gb|EDP30935.1| cytoplasmic intermediate filament protein, putative [Brugia malayi]
Length = 287
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T + FQ SAKGN+ I E DP+GKF+ L N S++++LG +L RK+ + +
Sbjct: 164 TKTTFQ--RSAKGNVTIAECDPNGKFIMLENSHRSKDENLGEHKLRRKLDNRREIVYIIP 221
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
++AG T+ +W+ + +G H PP ++V + +G G + T L+N DG+
Sbjct: 222 PNTVLKAGRTMKIWARD-QGGIHSPPESLVYDGENTWGIGANVVTTLINKDGD 273
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 174 ANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQ 233
AN+ I N ++E E+K + G ++ +L A N L + + L +Q+ +Q
Sbjct: 22 ANRANIEANYQRE------EVKRMRDNIGDLRGKLGDLEAKNALLEKEVQSLNNQLNDDQ 75
Query: 234 SKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++ +A ++R++ E + + + L++ K LD EIA YR ++E EES +
Sbjct: 76 RQYEAALNDRDATLRRMREECQTLVAELQALLDTKQMLDAEIAIYRKMLEGEESRV 131
>gi|431917947|gb|ELK17176.1| Desmin [Pteropus alecto]
Length = 482
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 332 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 391
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 392 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 431
>gi|23506465|gb|AAN37810.1| mutant desmin [Homo sapiens]
Length = 470
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 419
>gi|387915460|gb|AFK11339.1| desmin [Callorhinchus milii]
Length = 458
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ +N L + +ELE++ +E + + AR+E EI+ L+ EM L+DY++
Sbjct: 317 YTCEIDALKGSNESLIRQMRELEERFGHEAAGYTNTIARLEEEIRHLKDEMARHLRDYQD 376
Query: 260 LMEIKINLDVEIAQYRNLMEAEES--SLPT 287
L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 377 LLNVKMALDVEIATYRKLLEGEESRITLPV 406
>gi|344251698|gb|EGW07802.1| Desmin [Cricetulus griseus]
Length = 471
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E S + AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 419
>gi|281182830|ref|NP_001162488.1| desmin [Papio anubis]
gi|302563351|ref|NP_001181195.1| desmin [Macaca mulatta]
gi|164708499|gb|ABY67206.1| desmin (predicted) [Papio anubis]
gi|194072584|dbj|BAG54999.1| desmin [Macaca fascicularis]
gi|355565212|gb|EHH21701.1| hypothetical protein EGK_04826 [Macaca mulatta]
Length = 470
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 419
>gi|181540|gb|AAA99221.1| desmin [Homo sapiens]
Length = 469
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 319 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 378
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM L++Y++L+ +K+ LDVEIA YR L+E EES +
Sbjct: 379 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRI 415
>gi|126158909|ref|NP_001075044.1| desmin [Bos taurus]
gi|426221609|ref|XP_004005001.1| PREDICTED: desmin [Ovis aries]
gi|6166114|sp|O62654.3|DESM_BOVIN RecName: Full=Desmin
gi|124829228|gb|AAI33411.1| Desmin [Bos taurus]
gi|296490271|tpg|DAA32384.1| TPA: desmin [Bos taurus]
Length = 470
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 419
>gi|410969488|ref|XP_003991227.1| PREDICTED: desmin [Felis catus]
Length = 472
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 322 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 381
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM L++Y++L+ +K+ LDVEIA YR L+E EES +
Sbjct: 382 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRI 418
>gi|296205668|ref|XP_002749861.1| PREDICTED: desmin [Callithrix jacchus]
gi|166831540|gb|ABY89805.1| desmin (predicted) [Callithrix jacchus]
Length = 469
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 319 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 378
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 379 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 418
>gi|332246625|ref|XP_003272453.1| PREDICTED: desmin [Nomascus leucogenys]
gi|426338678|ref|XP_004033302.1| PREDICTED: desmin [Gorilla gorilla gorilla]
Length = 470
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 419
>gi|148728589|gb|ABR08708.1| mutant desmin [Homo sapiens]
Length = 470
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 419
>gi|11968118|ref|NP_071976.1| desmin [Rattus norvegicus]
gi|1352241|sp|P48675.2|DESM_RAT RecName: Full=Desmin
gi|452779|emb|CAA51920.1| desmin [Rattus norvegicus]
Length = 469
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 319 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 378
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 379 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 418
>gi|3411130|gb|AAC39938.1| mutant desmin [Homo sapiens]
Length = 470
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDPLKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 419
>gi|19774203|gb|AAL99078.1|AF487828_1 mutant desmin [Homo sapiens]
Length = 470
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFPSEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 419
>gi|3411132|gb|AAC39939.1| mutant desmin [Homo sapiens]
Length = 470
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEPSGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 419
>gi|1408188|gb|AAC50680.1| desmin [Homo sapiens]
Length = 469
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 319 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 378
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 379 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 418
>gi|118455|sp|P02541.2|DESM_MESAU RecName: Full=Desmin
gi|387071|gb|AAA37072.1| desmin, partial [Mesocricetus auratus]
gi|19352179|dbj|BAB85979.1| desmin [Mesocricetus auratus]
Length = 469
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 319 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 378
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 379 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 418
>gi|38197676|gb|AAH61872.1| Desmin [Rattus norvegicus]
gi|149016188|gb|EDL75434.1| desmin [Rattus norvegicus]
Length = 469
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 319 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 378
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 379 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 418
>gi|33563250|ref|NP_034173.1| desmin [Mus musculus]
gi|3915671|sp|P31001.3|DESM_MOUSE RecName: Full=Desmin
gi|21594446|gb|AAH31760.1| Desmin [Mus musculus]
gi|74206494|dbj|BAE21141.1| unnamed protein product [Mus musculus]
Length = 469
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 319 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEANGYQDNIARLEEEIRHLKD 378
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 379 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 418
>gi|395527625|ref|XP_003765943.1| PREDICTED: desmin isoform 1 [Sarcophilus harrisii]
Length = 472
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 322 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEANGYQDNIARLEEEIRHLKD 381
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 382 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 421
>gi|194211344|ref|XP_001492052.2| PREDICTED: desmin-like [Equus caballus]
Length = 469
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 319 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 378
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 379 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 418
>gi|440355928|gb|AGC00771.1| mutant desmin p.K241E [Homo sapiens]
Length = 470
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 419
>gi|440911054|gb|ELR60783.1| Desmin, partial [Bos grunniens mutus]
Length = 400
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 250 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 309
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 310 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 349
>gi|55749932|ref|NP_001918.3| desmin [Homo sapiens]
gi|114583482|ref|XP_526039.2| PREDICTED: desmin isoform 5 [Pan troglodytes]
gi|397495746|ref|XP_003818707.1| PREDICTED: desmin [Pan paniscus]
gi|6686280|sp|P17661.3|DESM_HUMAN RecName: Full=Desmin
gi|21594664|gb|AAH32116.1| Desmin [Homo sapiens]
gi|62822503|gb|AAY15051.1| unknown [Homo sapiens]
gi|119591145|gb|EAW70739.1| desmin, isoform CRA_a [Homo sapiens]
gi|119591147|gb|EAW70741.1| desmin, isoform CRA_a [Homo sapiens]
gi|123982934|gb|ABM83208.1| desmin [synthetic construct]
gi|123997613|gb|ABM86408.1| desmin [synthetic construct]
Length = 470
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 419
>gi|74203430|dbj|BAE20872.1| unnamed protein product [Mus musculus]
Length = 469
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 319 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEANGYQDNIARLEEEIRHLKD 378
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 379 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 418
>gi|354497066|ref|XP_003510643.1| PREDICTED: desmin-like [Cricetulus griseus]
Length = 470
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 419
>gi|301778863|ref|XP_002924853.1| PREDICTED: desmin-like [Ailuropoda melanoleuca]
Length = 522
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +E+ED+ E Q AR+E EI+ L+
Sbjct: 372 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMREMEDRFASEASGYQDNIARLEEEIRHLKD 431
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM L++Y++L+ +K+ LDVEIA YR L+E EES +
Sbjct: 432 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRI 468
>gi|156380617|ref|XP_001631864.1| predicted protein [Nematostella vectensis]
gi|156218912|gb|EDO39801.1| predicted protein [Nematostella vectensis]
Length = 105
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAG 128
SS GN+ I EV+PDG +V+L+N + ++ +G + + + V G T F+F +++A
Sbjct: 1 SSHTGNVRILEVNPDGNYVRLFNTSAHRDEEIGGYMIQQNVAGRPVTVFRFPPRTRLKAL 60
Query: 129 GTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGEL 173
TVWS + H PP + + K Q K+G+G E +TIL +G++
Sbjct: 61 SHTTVWSAG-SLSRHNPPSDFLWKEQHKWGTGPECTTILCKPNGQV 105
>gi|6531404|gb|AAF15400.1|AF137053_1 mutant desmin [Homo sapiens]
Length = 470
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 419
>gi|395841670|ref|XP_003793657.1| PREDICTED: peripherin [Otolemur garnettii]
Length = 470
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 65/103 (63%), Gaps = 6/103 (5%)
Query: 192 LELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQ 247
LE+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 310 LEMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLK 369
Query: 248 TEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 370 EEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 412
>gi|54696464|gb|AAV38604.1| desmin [synthetic construct]
Length = 471
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 419
>gi|431901369|gb|ELK08395.1| Peripherin [Pteropus alecto]
Length = 579
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 420 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 479
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LDVEIA YR L+E EES S+P +
Sbjct: 480 EMARHLREYQELLNVKMALDVEIATYRKLLEGEESRISVPVH 521
>gi|183637292|gb|ACC64564.1| muscle-specific intermediate filament desmin (predicted)
[Rhinolophus ferrumequinum]
Length = 470
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEANGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 419
>gi|67969124|dbj|BAE00916.1| unnamed protein product [Macaca fascicularis]
Length = 208
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 58 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 117
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 118 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 157
>gi|119591146|gb|EAW70740.1| desmin, isoform CRA_b [Homo sapiens]
Length = 208
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 58 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 117
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 118 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 157
>gi|432848872|ref|XP_004066493.1| PREDICTED: desmin-like [Oryzias latipes]
Length = 470
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 4/86 (4%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + +ELED+ E ++F AR+EAEI ++ EM L++Y++
Sbjct: 330 YTCEIDSLKGTNESLMRQMRELEDRHGCEAARFQDTIARLEAEIANMKDEMARHLREYQD 389
Query: 260 LMEIKINLDVEIAQYRNLMEAEESSL 285
L+ IK+ LDVEIA YR L+E EES +
Sbjct: 390 LLNIKMALDVEIATYRKLLEGEESRI 415
>gi|59958381|ref|NP_001012394.1| desmin [Canis lupus familiaris]
gi|62286518|sp|Q5XFN2.3|DESM_CANFA RecName: Full=Desmin
gi|53851036|tpg|DAA05325.1| TPA_exp: desmin [Canis familiaris]
Length = 469
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +E+ED+ E Q AR+E EI+ L+
Sbjct: 319 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMREMEDRFASEASGYQDNIARLEEEIRHLKD 378
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 379 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 418
>gi|32566480|ref|NP_510649.3| Protein IFA-3 [Caenorhabditis elegans]
gi|46576386|sp|Q21065.1|IFA3_CAEEL RecName: Full=Intermediate filament protein ifa-3; AltName:
Full=Cel IF A3; AltName: Full=Intermediate filament
protein A3; Short=IF-A3
gi|312740|emb|CAA50179.1| Cytoplasmic intermediate filament (IF) protein [Caenorhabditis
elegans]
gi|33300136|emb|CAA91057.4| Protein IFA-3 [Caenorhabditis elegans]
Length = 581
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 71 SAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
SAKGN+ I EV P+GKFV L N + E+ LG+W+L RK+ G+ + F F +
Sbjct: 464 SAKGNVSIKEVSPEGKFVILENTHRDKEEPLGDWKLKRKIDGKREIVFTFPSDYILHPVQ 523
Query: 130 TVTVWSFNVEGATHEPPHNIVMK-NQKFGSGDEISTILLNTDGE 172
TV +++ PP +V + + FG+G + TIL N GE
Sbjct: 524 TVKIFARG--NGVANPPEVLVFEGDDTFGAGANVQTILYNNSGE 565
>gi|355683670|gb|AER97159.1| desmin [Mustela putorius furo]
Length = 468
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +E+ED+ E Q AR+E EI+ L+
Sbjct: 319 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMREMEDRFASEASGYQDNIARLEEEIRHLKD 378
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 379 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 418
>gi|380799351|gb|AFE71551.1| desmin, partial [Macaca mulatta]
Length = 275
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 125 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 184
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 185 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 224
>gi|384371814|gb|AFH78106.1| desmin, partial [Spermophilus tridecemlineatus]
Length = 115
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 2 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 61
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 62 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 101
>gi|19698555|gb|AAL93205.1|AF486807_1 mutant desmin [Homo sapiens]
Length = 470
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y +L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYPDLLNVKMALDVEIATYRKLLEGEESRINLP 419
>gi|410925695|ref|XP_003976315.1| PREDICTED: lamin-L(III)-like [Takifugu rubripes]
Length = 593
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 33 VAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYN 92
VA T G KKRK E S + SS KG + + EVD DGK+V+L N
Sbjct: 411 VARTHEHGCKVRGKKRK----REGVSGGSPACKLSSRSSQKGCVSVAEVDVDGKYVRLKN 466
Query: 93 KGSEEQSLGNWQLVRKV---QGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNI 149
EQ LG W +VR+V G++ SF + +EAG T+T+W E A +P +
Sbjct: 467 HSDTEQPLGGW-VVRRVYPLSGDI--SFHIPSSCILEAGRTLTIWGAAAE-AEADPGDLV 522
Query: 150 VMKNQKFGSGDEISTILLNTDGELANQERI 179
+ ++ +G ++ LLN + E + R+
Sbjct: 523 LQSHRSWGPITDVRVSLLNPNREEVAERRV 552
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 35/53 (66%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
Q K + + E+ ++++M QL+DY L+++K+ LD+EI YR ++E EE L
Sbjct: 347 QQKLHQKDEELLNMRSQMLSQLEDYESLLDVKLALDMEINAYRKMLEVEEQRL 399
>gi|281344259|gb|EFB19843.1| hypothetical protein PANDA_014252 [Ailuropoda melanoleuca]
Length = 451
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +E+ED+ E Q AR+E EI+ L+
Sbjct: 301 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMREMEDRFASEASGYQDNIARLEEEIRHLKD 360
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 361 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 400
>gi|3411134|gb|AAC39940.1| mutant desmin [Homo sapiens]
Length = 470
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLIVKMALDVEIATYRKLLEGEESRINLP 419
>gi|355750863|gb|EHH55190.1| hypothetical protein EGM_04344, partial [Macaca fascicularis]
Length = 400
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 250 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 309
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 310 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 349
>gi|225708234|gb|ACO09963.1| Desmin [Osmerus mordax]
Length = 473
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 6/101 (5%)
Query: 192 LELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQ 247
+E E + + Y E++ L+ N L + +E+ED+ E Q AR+EAEI ++
Sbjct: 319 METMEFRHQIQSYTCEIDSLKGTNESLMRQMREMEDRYGREAGGFQDNIARLEAEIANMK 378
Query: 248 TEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES SLP
Sbjct: 379 DEMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRISLP 419
>gi|387070|gb|AAA37071.1| desmin, partial [Mesocricetus auratus]
gi|224878|prf||1203204A desmin
Length = 298
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 148 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 207
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 208 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 247
>gi|395839331|ref|XP_003792548.1| PREDICTED: intermediate filament tail domain-containing protein 1
[Otolemur garnettii]
Length = 398
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 70/131 (53%), Gaps = 12/131 (9%)
Query: 53 LEEYESEERTSSGF---------QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGN 102
L Y S RTS Q TSS+ G+++I EV G FVKL N +E +GN
Sbjct: 154 LTAYPSRSRTSYRHFSMILEEVGQSTSSSLGDIKIAEVHIKGLFVKLINSSLDKEVGIGN 213
Query: 103 WQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDE 161
+ L + V G+ + ++F + ++A TVTVW+ E A HEPP + + K Q KF + +
Sbjct: 214 YILQQNVNGQRVSLYQFLPNITMQANTTVTVWAATSE-AKHEPPSHFLWKEQDKFITSPD 272
Query: 162 ISTILLNTDGE 172
+TIL +G+
Sbjct: 273 CTTILCKPNGQ 283
>gi|268531342|ref|XP_002630797.1| C. briggsae CBR-IFB-1 protein [Caenorhabditis briggsae]
Length = 558
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T + FQ SAKGN+ I+E DP+GKF+KL N ++++++G ++ RK+ G + +
Sbjct: 435 TKTTFQ--RSAKGNVTISECDPNGKFIKLENTSRNKDENVGEHKIRRKLDGRREIVYSIP 492
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
+ I+ G +T+++ + +G + PP ++V + +G G + T L+N DGE
Sbjct: 493 ANVSIKPGKNLTIYARD-QGGINNPPESLVFDGENTWGIGANVVTSLVNKDGE 544
>gi|224593273|ref|NP_001139200.1| intermediate filament tail domain-containing protein 1 isoform 1
[Homo sapiens]
Length = 409
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 160 QFTSSSLGDVEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVM 219
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 220 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 266
>gi|194379332|dbj|BAG63632.1| unnamed protein product [Homo sapiens]
Length = 409
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 160 QFTSSSLGDVEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVM 219
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 220 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 266
>gi|397517421|ref|XP_003828909.1| PREDICTED: intermediate filament tail domain-containing protein 1
isoform 2 [Pan paniscus]
Length = 409
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 160 QFTSSSLGDVEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVM 219
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 220 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 266
>gi|119616923|gb|EAW96517.1| likely ortholog of mouse Pas1 candidate 1, isoform CRA_b [Homo
sapiens]
Length = 363
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 114 QFTSSSLGDVEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVM 173
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 174 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 220
>gi|440905556|gb|ELR55926.1| Peripherin, partial [Bos grunniens mutus]
Length = 475
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 316 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 375
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 376 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 417
>gi|21358854|gb|AAM47026.1| mutant desmin [Homo sapiens]
Length = 467
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEY-EQSKFARMEAEIKRLQTEMT 251
E+ E + + Y E++ L+ N L + +ELED+ Q AR+E EI+ L+ EM
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASGYQDNIARLEEEIRHLKDEMA 379
Query: 252 EQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 RHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 416
>gi|21752162|dbj|BAC04132.1| unnamed protein product [Homo sapiens]
Length = 388
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 139 QFTSSSLGDVEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVM 198
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 199 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 245
>gi|224593268|ref|NP_689803.2| intermediate filament tail domain-containing protein 1 isoform 2
[Homo sapiens]
gi|296434538|sp|Q8N9Z9.2|ILFT1_HUMAN RecName: Full=Intermediate filament tail domain-containing protein
1
Length = 388
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 139 QFTSSSLGDVEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVM 198
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 199 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 245
>gi|119616924|gb|EAW96518.1| likely ortholog of mouse Pas1 candidate 1, isoform CRA_c [Homo
sapiens]
Length = 388
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 139 QFTSSSLGDVEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVM 198
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 199 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 245
>gi|73996508|ref|XP_534812.2| PREDICTED: peripherin isoform 1 [Canis lupus familiaris]
Length = 469
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 310 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 369
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 370 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 411
>gi|23272807|gb|AAH37957.1| IFLTD1 protein [Homo sapiens]
gi|119616922|gb|EAW96516.1| likely ortholog of mouse Pas1 candidate 1, isoform CRA_a [Homo
sapiens]
Length = 291
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 42 QFTSSSLGDVEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVM 101
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 102 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 148
>gi|403296559|ref|XP_003939170.1| PREDICTED: peripherin [Saimiri boliviensis boliviensis]
Length = 470
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 311 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 370
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 371 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 412
>gi|372266135|ref|NP_001243195.1| intermediate filament tail domain-containing protein 1 isoform 5
[Homo sapiens]
Length = 291
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 42 QFTSSSLGDVEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVM 101
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 102 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 148
>gi|344267916|ref|XP_003405811.1| PREDICTED: peripherin [Loxodonta africana]
Length = 469
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 310 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 369
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 370 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 411
>gi|301773974|ref|XP_002922418.1| PREDICTED: peripherin-like [Ailuropoda melanoleuca]
Length = 467
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 309 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 368
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 369 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 410
>gi|281348542|gb|EFB24126.1| hypothetical protein PANDA_011377 [Ailuropoda melanoleuca]
Length = 446
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 307 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 366
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 367 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 408
>gi|71011128|gb|AAZ17413.1| mutant desmin [Homo sapiens]
Length = 470
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDV+IA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVKIATYRKLLEGEESRINLP 419
>gi|402885866|ref|XP_003906365.1| PREDICTED: peripherin [Papio anubis]
Length = 470
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 311 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 370
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 371 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 412
>gi|348556468|ref|XP_003464043.1| PREDICTED: desmin-like [Cavia porcellus]
Length = 472
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELE++ E Q AR+E EI+ L+
Sbjct: 322 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEERFASEASGYQDNIARLEEEIRHLKD 381
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 382 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 421
>gi|149714493|ref|XP_001504235.1| PREDICTED: peripherin [Equus caballus]
Length = 467
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 310 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 369
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 370 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 411
>gi|109096524|ref|XP_001108977.1| PREDICTED: peripherin-like [Macaca mulatta]
Length = 470
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 311 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 370
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 371 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 412
>gi|21264345|ref|NP_006253.2| peripherin [Homo sapiens]
gi|114644939|ref|XP_509044.2| PREDICTED: peripherin [Pan troglodytes]
gi|426372449|ref|XP_004053136.1| PREDICTED: peripherin [Gorilla gorilla gorilla]
gi|118585871|sp|P41219.2|PERI_HUMAN RecName: Full=Peripherin; AltName: Full=Neurofilament 4
gi|21595822|gb|AAH32703.1| Peripherin [Homo sapiens]
gi|61364186|gb|AAX42503.1| peripherin [synthetic construct]
gi|61364191|gb|AAX42504.1| peripherin [synthetic construct]
gi|119578465|gb|EAW58061.1| peripherin, isoform CRA_b [Homo sapiens]
gi|123993365|gb|ABM84284.1| peripherin [synthetic construct]
gi|124000335|gb|ABM87676.1| peripherin [synthetic construct]
gi|261860192|dbj|BAI46618.1| peripherin [synthetic construct]
Length = 470
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 311 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 370
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 371 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 412
>gi|350584327|ref|XP_003355590.2| PREDICTED: intermediate filament tail domain-containing protein
1-like [Sus scrofa]
Length = 413
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q SSA G+++I EV+ G FVKL N +E +GN+ L + V G+ + ++F + +
Sbjct: 166 QSRSSALGDVKIAEVNVKGLFVKLINSSLDKELEIGNYILQQNVDGQRVSLYQFLPDIIM 225
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q +F +G +TIL +GE
Sbjct: 226 QANSTVTVWAAASE-AKHQPPSDFLWKEQNRFRTGPSCTTILCKPNGE 272
>gi|297691747|ref|XP_002823235.1| PREDICTED: peripherin [Pongo abelii]
gi|332206315|ref|XP_003252236.1| PREDICTED: peripherin [Nomascus leucogenys]
Length = 470
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 311 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 370
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 371 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 412
>gi|193785065|dbj|BAG54218.1| unnamed protein product [Homo sapiens]
Length = 470
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 311 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 370
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 371 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 412
>gi|119578464|gb|EAW58060.1| peripherin, isoform CRA_a [Homo sapiens]
Length = 471
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 311 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 370
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 371 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 412
>gi|397517419|ref|XP_003828908.1| PREDICTED: intermediate filament tail domain-containing protein 1
isoform 1 [Pan paniscus]
Length = 388
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 139 QFTSSSLGDVEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVM 198
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 199 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 245
>gi|397511012|ref|XP_003825876.1| PREDICTED: peripherin [Pan paniscus]
Length = 470
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 311 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 370
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 371 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 412
>gi|296211578|ref|XP_002807143.1| PREDICTED: LOW QUALITY PROTEIN: peripherin [Callithrix jacchus]
Length = 477
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 318 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 377
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 378 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 419
>gi|22415740|gb|AAM95238.1| mutant desmin [Homo sapiens]
Length = 470
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ + L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTDDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 419
>gi|410964338|ref|XP_003988712.1| PREDICTED: peripherin [Felis catus]
Length = 442
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 283 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 342
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 343 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 384
>gi|332839736|ref|XP_003313834.1| PREDICTED: intermediate filament tail domain-containing protein 1
isoform 1 [Pan troglodytes]
Length = 409
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 160 QFTSSSLGDVEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYQFLPNIVM 219
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 220 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 266
>gi|156139125|ref|NP_001095848.1| peripherin [Bos taurus]
gi|325530200|sp|A6QQJ3.1|PERI_BOVIN RecName: Full=Peripherin
gi|151554400|gb|AAI49863.1| PRPH protein [Bos taurus]
gi|296487798|tpg|DAA29911.1| TPA: peripherin [Bos taurus]
Length = 469
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 310 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 369
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 370 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 411
>gi|426372014|ref|XP_004052931.1| PREDICTED: intermediate filament tail domain-containing protein 1
isoform 1 [Gorilla gorilla gorilla]
Length = 388
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 139 QFTSSSLGDVEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVM 198
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 199 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 245
>gi|19908424|gb|AAL99215.1| mutant desmin [Homo sapiens]
Length = 470
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARPEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 419
>gi|307358|gb|AAA60190.1| peripherin [Homo sapiens]
Length = 471
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 311 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 370
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 371 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 412
>gi|426372016|ref|XP_004052932.1| PREDICTED: intermediate filament tail domain-containing protein 1
isoform 2 [Gorilla gorilla gorilla]
Length = 291
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 42 QFTSSSLGDVEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVM 101
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 102 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 148
>gi|194384458|dbj|BAG59389.1| unnamed protein product [Homo sapiens]
Length = 325
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 76 QFTSSSLGDVEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVM 135
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 136 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 182
>gi|149032092|gb|EDL87004.1| peripherin 1, isoform CRA_a [Rattus norvegicus]
Length = 506
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 346 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 405
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 406 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 447
>gi|432958979|ref|XP_004086139.1| PREDICTED: lamin-L(III)-like [Oryzias latipes]
Length = 609
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 75/134 (55%), Gaps = 19/134 (14%)
Query: 46 KKRKLNILEEYESEERTSSGFQVT--SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNW 103
KKRK +E R+S +++ S+ KG + + EVD GK+V++ N +EQ LG W
Sbjct: 442 KKRK------HEEATRSSPAYKICRRSTRKGGVTVAEVDVGGKYVQIQNNSDQEQPLGGW 495
Query: 104 QLVRKV---QGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEP-PHNIVMKNQ-KFGS 158
+VR+V G+V SF+F + + G T+T+WS GA E P ++V++N +G+
Sbjct: 496 -VVRRVYPHSGDV--SFQFPPSCVLAGGQTLTIWS---SGAADEAEPGDMVLENNGSWGA 549
Query: 159 GDEISTILLNTDGE 172
++ +LLN E
Sbjct: 550 VGDMRVVLLNPSHE 563
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 218 LTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQ 273
L ER +EL+ ++ E Q + + E E+ ++T+M QL++++ L+++K+ LD+EI
Sbjct: 347 LEERFQELQRTLDQERDAWQQRLSLKERELLSMRTQMNSQLENHQNLLDVKLALDMEINA 406
Query: 274 YRNLMEAEESSL 285
YR ++E EE L
Sbjct: 407 YRKMLEVEEQRL 418
>gi|2253158|emb|CAA42500.1| peripherin [Mus musculus]
Length = 507
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 347 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 406
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 407 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 448
>gi|224593271|ref|NP_001139199.1| intermediate filament tail domain-containing protein 1 isoform 3
[Homo sapiens]
Length = 325
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 76 QFTSSSLGDVEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVM 135
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 136 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 182
>gi|397517423|ref|XP_003828910.1| PREDICTED: intermediate filament tail domain-containing protein 1
isoform 3 [Pan paniscus]
Length = 325
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 76 QFTSSSLGDVEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVM 135
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 136 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 182
>gi|784942|emb|CAA60048.1| cytoplasmic intermediate filament protein [Ascaris lumbricoides]
Length = 612
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T+S ++AKGN+ I + DGKF+ + N ++E+++G WQ+ R + F F
Sbjct: 484 TTSKIHYHATAKGNLSIQDASVDGKFIVIENTSPTKEENIGEWQIKRSADNGPEVVFTFP 543
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVM-KNQKFGSGDEISTILLNTDGE 172
+ ++ TV +W+ + +G +PP ++ K FG G T+L+N GE
Sbjct: 544 KGFILKPLKTVKIWARD-QGGEDKPPDQLIFEKEDSFGFGSNAKTVLINASGE 595
>gi|324502807|gb|ADY41232.1| Intermediate filament protein ifa-1 [Ascaris suum]
Length = 586
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T+S ++AKGN+ I + DGKF+ + N ++E+++G WQ+ R + F F
Sbjct: 458 TTSKIHYHATAKGNLSIQDASVDGKFIVIENTSPTKEENIGEWQIKRSADNGPEVVFTFP 517
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVM-KNQKFGSGDEISTILLNTDGE 172
+ ++ TV +W+ + +G +PP ++ K FG G T+L+N GE
Sbjct: 518 KGFILKPLKTVKIWARD-QGGEDKPPDQLIFEKEDSFGFGSNAKTVLINASGE 569
>gi|334347771|ref|XP_001373911.2| PREDICTED: peripherin [Monodelphis domestica]
Length = 466
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 307 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 366
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 367 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPIH 408
>gi|348580179|ref|XP_003475856.1| PREDICTED: peripherin-like [Cavia porcellus]
Length = 467
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 308 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 367
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 368 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPIH 409
>gi|354505547|ref|XP_003514829.1| PREDICTED: peripherin-like [Cricetulus griseus]
gi|344247773|gb|EGW03877.1| Peripherin [Cricetulus griseus]
Length = 474
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 314 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 373
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 374 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 415
>gi|291392494|ref|XP_002712783.1| PREDICTED: RIKEN cDNA 4933403M22-like [Oryctolagus cuniculus]
Length = 484
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G+++I EV+ G FV+L N + E +GN L + V G+ + ++F + +
Sbjct: 201 QSTSSSLGDIKIAEVNVQGLFVRLINASRDKELDIGNHILQQNVNGQALSLYRFLPNIVM 260
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q +F + + +TIL +GE
Sbjct: 261 QANSTVTVWAAASE-AKHQPPPDFLWKEQDRFRTSPDCTTILCKPNGE 307
>gi|432103442|gb|ELK30547.1| Desmin [Myotis davidii]
Length = 407
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +E+ED+ E Q AR+E EI+ L+
Sbjct: 257 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMREMEDRFTSEASGYQDSIARLEEEIRHLKD 316
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 317 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 356
>gi|341875801|gb|EGT31736.1| hypothetical protein CAEBREN_28968 [Caenorhabditis brenneri]
Length = 558
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T + FQ SAKGN+ I+E DP+GKF+KL N ++++++G ++ RK+ G + +
Sbjct: 435 TKTTFQ--RSAKGNITISECDPNGKFIKLENTSRNKDENVGEHKIKRKLDGRREIVYSIP 492
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
+ ++ G +T+++ + +G + PP ++V + +G G + T L+N DGE
Sbjct: 493 ANVTMKPGKNLTIYARD-QGGINNPPESLVFDGENTWGIGANVVTALVNKDGE 544
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 210 ELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDV 269
E++ NY+L + DQ +YE + R +A ++R++ E + + + L++ K LD
Sbjct: 334 EVQNLNYQLAD------DQRQYEAALNDR-DATLRRMREECQTLVAELQALLDTKQMLDA 386
Query: 270 EIAQYRNLMEAEESSL 285
EIA YR ++E EES +
Sbjct: 387 EIAIYRKMLEGEESRV 402
>gi|432114488|gb|ELK36336.1| Peripherin [Myotis davidii]
Length = 536
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 377 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGNARLEEELRQLKE 436
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 437 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 478
>gi|351694635|gb|EHA97553.1| Desmin [Heterocephalus glaber]
Length = 383
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 233 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRYASEASGYQDSIARLEEEIRHLKD 292
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 293 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 332
>gi|332839738|ref|XP_003313835.1| PREDICTED: intermediate filament tail domain-containing protein 1
isoform 2 [Pan troglodytes]
Length = 388
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 139 QFTSSSLGDVEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYQFLPNIVM 198
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 199 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 245
>gi|91171|pir||S07823 peripherin (clone 3u) - mouse (fragment)
gi|817992|emb|CAA33502.1| peripherin (AA 55 - 493) [Mus musculus]
Length = 438
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 278 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 337
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 338 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 379
>gi|17533051|ref|NP_495136.1| Protein IFB-1, isoform b [Caenorhabditis elegans]
gi|46576384|sp|Q19289.1|IFB1_CAEEL RecName: Full=Intermediate filament protein ifb-1; AltName:
Full=Cel IF B1; AltName: Full=Intermediate filament
protein B1; Short=IF-B1
gi|373219025|emb|CCD65030.1| Protein IFB-1, isoform b [Caenorhabditis elegans]
Length = 589
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T + FQ SAKGN+ I+E DP+GKF+KL N ++++++G ++ RK+ G + +
Sbjct: 466 TKTTFQ--RSAKGNVTISECDPNGKFIKLENSHRNKDENVGEHKIRRKLDGRREIVYSIP 523
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
+ I+ G +T+++ + +G + PP ++V + +G G + T L+N DGE
Sbjct: 524 ANVVIKPGKNLTIYARD-QGGINNPPESLVFDGENTWGIGANVVTSLVNKDGE 575
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 210 ELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDV 269
E++ NY+LT+ DQ +YE + R +A ++R++ E + + + L++ K LD
Sbjct: 365 EVQNLNYQLTD------DQRQYEAALNDR-DATLRRMREECQTLVAELQALLDTKQMLDA 417
Query: 270 EIAQYRNLMEAEESSL 285
EIA YR ++E EE+ +
Sbjct: 418 EIAIYRKMLEGEETRV 433
>gi|332839744|ref|XP_003313837.1| PREDICTED: intermediate filament tail domain-containing protein 1
isoform 4 [Pan troglodytes]
Length = 291
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 42 QFTSSSLGDVEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYQFLPNIVM 101
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 102 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 148
>gi|426224546|ref|XP_004006430.1| PREDICTED: peripherin [Ovis aries]
Length = 476
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 317 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 376
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 377 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 418
>gi|341900311|gb|EGT56246.1| hypothetical protein CAEBREN_21733 [Caenorhabditis brenneri]
Length = 589
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T + FQ SAKGN+ I+E DP+GKF+KL N ++++++G ++ RK+ G + +
Sbjct: 466 TKTTFQ--RSAKGNITISECDPNGKFIKLENTSRNKDENVGEHKIKRKLDGRREIVYSIP 523
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
+ ++ G +T+++ + +G + PP ++V + +G G + T L+N DGE
Sbjct: 524 ANVTMKPGKNLTIYARD-QGGINNPPESLVFDGENTWGIGANVVTALVNKDGE 575
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 210 ELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDV 269
E++ NY+L + DQ +YE + R +A ++R++ E + + + L++ K LD
Sbjct: 365 EVQNLNYQLAD------DQRQYEAALNDR-DATLRRMREECQTLVAELQALLDTKQMLDA 417
Query: 270 EIAQYRNLMEAEESSL 285
EIA YR ++E EES +
Sbjct: 418 EIAIYRKMLEGEESRV 433
>gi|17533053|ref|NP_495137.1| Protein IFB-1, isoform a [Caenorhabditis elegans]
gi|373219024|emb|CCD65029.1| Protein IFB-1, isoform a [Caenorhabditis elegans]
Length = 558
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T + FQ SAKGN+ I+E DP+GKF+KL N ++++++G ++ RK+ G + +
Sbjct: 435 TKTTFQ--RSAKGNVTISECDPNGKFIKLENSHRNKDENVGEHKIRRKLDGRREIVYSIP 492
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
+ I+ G +T+++ + +G + PP ++V + +G G + T L+N DGE
Sbjct: 493 ANVVIKPGKNLTIYARD-QGGINNPPESLVFDGENTWGIGANVVTSLVNKDGE 544
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 210 ELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDV 269
E++ NY+LT+ DQ +YE + R +A ++R++ E + + + L++ K LD
Sbjct: 334 EVQNLNYQLTD------DQRQYEAALNDR-DATLRRMREECQTLVAELQALLDTKQMLDA 386
Query: 270 EIAQYRNLMEAEESSL 285
EIA YR ++E EE+ +
Sbjct: 387 EIAIYRKMLEGEETRV 402
>gi|109095974|ref|XP_001101938.1| PREDICTED: intermediate filament tail domain-containing protein
1-like [Macaca mulatta]
Length = 404
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q T+S+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 150 QFTASSLGDIEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVM 209
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 210 QASSTVTVWAAASE-AKHQPPSDFLWKEQDKFRTSPDCITILCKPNGQ 256
>gi|72679690|gb|AAI00657.1| Peripherin [Rattus norvegicus]
Length = 467
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 308 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 367
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 368 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 409
>gi|402885462|ref|XP_003906174.1| PREDICTED: intermediate filament tail domain-containing protein 1
[Papio anubis]
Length = 324
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q T+S+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 76 QFTASSLGDIEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVM 135
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE-LANQERIIDNL 183
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+ +A I
Sbjct: 136 QASSTVTVWAAASE-AKHQPPSDFLWKEQDKFRTSPDCITILCKPNGQAIAWYTPIHWKQ 194
Query: 184 RKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEI 243
E+ +E S + + + A+ +T KE +DQ + + S F +A++
Sbjct: 195 AWEKLDTDIEFNRCSVASPTFRKHVFQWTASTTTIT---KEKQDQPKEDISNFQVEQAQV 251
>gi|4761086|gb|AAD29248.1|AF101065_1 intermediate filament gliarin [Hirudo medicinalis]
Length = 638
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 61/125 (48%), Gaps = 13/125 (10%)
Query: 52 ILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQG 111
+L + E RT+ FQ SAKG I E PDGK+V + N G + +SLG W+L R V
Sbjct: 511 VLSKGEISARTT--FQ--KSAKGTTSIAETSPDGKYVLIENSGRKTESLGGWRLNRVVDD 566
Query: 112 EVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEP---PHNIVMKN-QKFGSGDEISTILL 167
+F F LK+ AG VW GA +P N V N FG G I T L
Sbjct: 567 VEVVNFVFPSDLKLNAGEKFKVW-----GAGQKPINASSNDVEANVDNFGIGSNILTRLY 621
Query: 168 NTDGE 172
NT GE
Sbjct: 622 NTLGE 626
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 33/45 (73%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES 283
++AEI RL+ E+ +++ + +M+ K+ L++EIA YR L+E EES
Sbjct: 404 LKAEIARLRAELESIIQELQNIMDTKLGLELEIAAYRKLLEGEES 448
>gi|332839742|ref|XP_520804.3| PREDICTED: intermediate filament tail domain-containing protein 1
isoform 5 [Pan troglodytes]
Length = 325
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 76 QFTSSSLGDVEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYQFLPNIVM 135
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 136 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 182
>gi|149032093|gb|EDL87005.1| peripherin 1, isoform CRA_b [Rattus norvegicus]
Length = 474
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 314 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 373
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 374 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 415
>gi|129822|sp|P21807.1|PERI_RAT RecName: Full=Peripherin
gi|206088|gb|AAA41829.1| peripherin [Rattus norvegicus]
gi|2642596|gb|AAB87067.1| peripherin [Rattus norvegicus]
Length = 468
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 308 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 367
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 368 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 409
>gi|166063971|ref|NP_036765.2| peripherin [Rattus norvegicus]
Length = 473
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 314 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 373
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 374 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 415
>gi|62204269|gb|AAH92715.1| Desm protein [Danio rerio]
gi|197247290|gb|AAI65607.1| Desm protein [Danio rerio]
Length = 488
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + E+E+++ E Q AR+EAEI +++ EM L++Y++
Sbjct: 325 YTCEIDSLKGTNESLRRQMSEMEERLGREAGGYQDTIARLEAEIAKMKDEMARHLREYQD 384
Query: 260 LMEIKINLDVEIAQYRNLMEAEES--SLPT 287
L+ +K+ LDVEIA YR L+E EES SLP
Sbjct: 385 LLNVKMALDVEIATYRKLLEGEESRISLPV 414
>gi|351697615|gb|EHB00534.1| Peripherin [Heterocephalus glaber]
Length = 510
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 63/102 (61%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR E E+++L+
Sbjct: 351 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARREEELRQLKE 410
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 411 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 452
>gi|2497274|sp|Q17107.1|AV71_ACAVI RecName: Full=Muscle cell intermediate filament protein AV71
gi|5709|emb|CAA48560.1| Av71 muscle cell intermediate filament [Acanthocheilonema viteae]
Length = 394
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T+S SAKGN+ I + DGK++ N S+E+ +G W+L RK+ G+ + + F
Sbjct: 270 TASRTSFQRSAKGNVSIQDAASDGKYILSENTHRSKEEPIGEWRLKRKIDGKREIVYTFP 329
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
++ G +V +W+ + PP +V + FG G + TIL N +GE
Sbjct: 330 TNFVLKPGKSVKIWARG--QGVYSPPDQLVFDAEDSFGIGSNVQTILFNKEGE 380
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
+ LR + S L +L + +GR+ + + EL NY+L + DQ YE + R
Sbjct: 144 VKRLRVQLSELRGKLADLEGRNSLLEKQTQEL---NYQLED------DQRSYEAALNDR- 193
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES 283
+A+I++++ E + + + L++ K LD EIA YR ++E EE+
Sbjct: 194 DAQIRKMREECQALMMELQMLLDTKQTLDAEIAIYRKMLEGEEN 237
>gi|395537859|ref|XP_003770906.1| PREDICTED: peripherin [Sarcophilus harrisii]
Length = 465
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 307 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 366
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 367 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPIH 408
>gi|3334475|sp|P15331.2|PERI_MOUSE RecName: Full=Peripherin
gi|2253157|emb|CAA42499.1| peripherin [Mus musculus]
gi|28374190|gb|AAH46291.1| Prph protein [Mus musculus]
Length = 475
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 315 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 374
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 375 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 416
>gi|75076981|sp|Q4R899.1|ILFT1_MACFA RecName: Full=Intermediate filament tail domain-containing protein
1
gi|67968628|dbj|BAE00673.1| unnamed protein product [Macaca fascicularis]
Length = 404
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q T+S+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 150 QFTASSLGDIEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVM 209
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 210 QASSTVTVWAAASE-AKHQPPSDFLWKEQDKFRTSPDCITILCKPNGQ 256
>gi|18858539|ref|NP_571038.1| desmin a [Danio rerio]
gi|5932493|gb|AAB03217.2| desmin [Danio rerio]
Length = 473
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + E+E+++ E Q AR+EAEI +++ EM L++Y++
Sbjct: 325 YTCEIDSLKGTNESLRRQMSEMEERLGREAGGYQDTIARLEAEIAKMKDEMARHLREYQD 384
Query: 260 LMEIKINLDVEIAQYRNLMEAEES--SLPT 287
L+ +K+ LDVEIA YR L+E EES SLP
Sbjct: 385 LLNVKMALDVEIATYRKLLEGEESRISLPV 414
>gi|254675337|ref|NP_001157060.1| peripherin isoform 2 [Mus musculus]
Length = 506
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 347 EMNESRRQIQSLMCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 406
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 407 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 448
>gi|254675335|ref|NP_038667.2| peripherin isoform 1 [Mus musculus]
gi|148672201|gb|EDL04148.1| peripherin 1, isoform CRA_b [Mus musculus]
Length = 507
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 347 EMNESRRQIQSLMCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 406
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 407 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 448
>gi|71011040|gb|AAZ17411.1| mutant desmin [Homo sapiens]
Length = 470
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ + N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDARKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 419
>gi|2253159|emb|CAA42501.1| peripherin [Mus musculus]
Length = 461
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 315 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 374
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 375 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 416
>gi|149032094|gb|EDL87006.1| peripherin 1, isoform CRA_c [Rattus norvegicus]
Length = 250
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 90 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 149
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 150 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 191
>gi|784941|emb|CAA60047.1| cytoplasmic intermediate filament protein [Ascaris lumbricoides]
gi|324505092|gb|ADY42193.1| Intermediate filament protein B [Ascaris suum]
Length = 589
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T + FQ SAKGN+ I+E DP+GKF+ L N S++++LG +L RK+ + +
Sbjct: 466 TKTTFQ--RSAKGNVTISECDPNGKFITLENTHRSKDENLGEHRLKRKLDNRREIVYTIP 523
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
++AG T+ +++ + +G H PP +V + +G G + T L+N DG+
Sbjct: 524 PNTVLKAGRTMKIYARD-QGGIHNPPDTLVFDGENTWGIGANVVTSLINKDGD 575
>gi|124235|sp|P23731.1|IFEB_ASCSU RecName: Full=Intermediate filament protein B; Short=IF-B
gi|102571|pir||S06954 intermediate filament protein B - common roundworm
Length = 589
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T + FQ SAKGN+ I+E DP+GKF+ L N S++++LG +L RK+ + +
Sbjct: 466 TKTTFQ--RSAKGNVTISECDPNGKFITLENTHRSKDENLGEHRLKRKLDNRREIVYTIP 523
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
++AG T+ +++ + +G H PP +V + +G G + T L+N DG+
Sbjct: 524 PNTVLKAGRTMKIYARD-QGGIHNPPDTLVFDGENTWGIGANVVTSLINKDGD 575
>gi|355564089|gb|EHH20589.1| hypothetical protein EGK_03472, partial [Macaca mulatta]
gi|355785973|gb|EHH66156.1| hypothetical protein EGM_03082, partial [Macaca fascicularis]
Length = 379
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q T+S+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 142 QFTASSLGDIEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVM 201
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 202 QASSTVTVWAAASE-AKHQPPSDFLWKEQDKFRTSPDCITILCKPNGQ 248
>gi|332232943|ref|XP_003265662.1| PREDICTED: intermediate filament tail domain-containing protein 1
isoform 1 [Nomascus leucogenys]
Length = 409
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + + G+ + ++F + +
Sbjct: 160 QFTSSSLGDVEIAEVNVKGLFVKLINSSFDKEMAIGDHILQQNMNGQTISLYRFLPNIVM 219
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 220 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 266
>gi|27527123|emb|CAC87100.2| intermediate filament protein [Lampetra fluviatilis]
Length = 367
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 6/91 (6%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L++AN L + +E+ED+ E S + +E +I+RL+ +M L+ Y++
Sbjct: 223 YTMEVDSLKSANESLLRQMREMEDRFSVEASGYQEAIGSLEEDIRRLKDDMARHLRQYQD 282
Query: 260 LMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
L+ +K+ LDVEIA YR L+E EES S PT+
Sbjct: 283 LLNVKMALDVEIATYRKLLEGEESRISTPTH 313
>gi|190402244|gb|ACE77656.1| desmin (predicted) [Sorex araneus]
Length = 469
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +E+ED+ E Q R+E EI+ L+
Sbjct: 319 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMREMEDRFANEAGGYQDSITRLEEEIRHLKD 378
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM L++Y++L+ +K+ LDVEIA YR L+E EES +
Sbjct: 379 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRI 415
>gi|1494978|emb|CAA63071.1| intermediate filament protein [Ascaris suum]
Length = 526
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T + FQ SAKGN+ I+E DP+GKF+ L N S++++LG +L RK+ + +
Sbjct: 403 TKTTFQ--RSAKGNVTISECDPNGKFITLENTHRSKDENLGEHRLKRKLDNRREIVYTIP 460
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
++AG T+ +++ + +G H PP +V + +G G + T L+N DG+
Sbjct: 461 PNTVLKAGRTMKIYARD-QGGIHNPPDTLVFDGENTWGIGANVVTSLINKDGD 512
>gi|149048981|gb|EDM01435.1| similar to RIKEN cDNA 4933403M22 (predicted) [Rattus norvegicus]
Length = 299
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q SS+ G+++I EV+ G FV+L N +E E +GN+ L + V G+ + ++F + +
Sbjct: 172 QFVSSSLGDIKIAEVNVKGFFVRLVNSSNEKEVEIGNYILQQNVNGQAVSLYRFPHNITM 231
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
+A GTVTVW+ E +P + + +F S + +TIL GE
Sbjct: 232 QASGTVTVWAAASEAKPQQPTDFVWEEQSRFRSSPDCTTILCKPSGE 278
>gi|432859898|ref|XP_004069291.1| PREDICTED: LOW QUALITY PROTEIN: plasticin-like [Oryzias latipes]
Length = 452
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 6/90 (6%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYREL 260
+ E++ L+ N L + +E+EDQ E Q R+E EI+ L+ EM L++Y++L
Sbjct: 307 NCEIDALKNTNEALVRQMREMEDQFGLEVGNYQDNVGRLEDEIRHLKEEMARHLREYQDL 366
Query: 261 MEIKINLDVEIAQYRNLMEAEES--SLPTY 288
+ +K+ LD+EIA YR L+E EES S+P Y
Sbjct: 367 LNVKMALDIEIATYRKLLEGEESRISVPIY 396
>gi|341879655|gb|EGT35590.1| hypothetical protein CAEBREN_31512 [Caenorhabditis brenneri]
Length = 540
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 74/138 (53%), Gaps = 8/138 (5%)
Query: 39 RGSVAPSKKRKLNILEE--YES-EERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYN-KG 94
+G V + +++ LE+ Y+S E +T S F+ AKGN+ I E DP+GK++ L N G
Sbjct: 391 QGVVVKQEVQRVGTLEQDHYDSGEVQTRSTFK--RHAKGNVSIVECDPNGKYIILENTSG 448
Query: 95 SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ 154
S + + ++++ R + G +F I G + ++ N G H PP +IVM++
Sbjct: 449 SIAEDVSHFEIRRVIDGTQAFTFHLPTHSLIHPHGHLKIYGRNA-GGIHSPPDSIVMESH 507
Query: 155 -KFGSGDEISTILLNTDG 171
+G+G + T L NT G
Sbjct: 508 PSWGTGAVVETFLYNTHG 525
>gi|11907570|gb|AAG41217.1|AF167579_1 mutant desmin [Homo sapiens]
Length = 470
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA Y L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALDVEIATYWKLLEGEESRINLP 419
>gi|254675339|ref|NP_001157061.1| peripherin isoform 3 [Mus musculus]
gi|148672200|gb|EDL04147.1| peripherin 1, isoform CRA_a [Mus musculus]
Length = 475
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 315 EMNESRRQIQSLMCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 374
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 375 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 416
>gi|311255274|ref|XP_003126153.1| PREDICTED: peripherin [Sus scrofa]
Length = 469
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ A++E E+++L+
Sbjct: 310 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAAKLEEELRQLKE 369
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 370 EMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVH 411
>gi|116875779|ref|NP_001070920.1| desmin [Danio rerio]
gi|116284183|gb|AAI24513.1| Zgc:154009 [Danio rerio]
gi|182889758|gb|AAI65598.1| Zgc:154009 protein [Danio rerio]
Length = 474
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
Query: 192 LELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQ 247
LE E + + Y E++ L+ +N L + +++ED+ E Q AR+EAEI ++
Sbjct: 321 LETMEYRHQIQSYTCEIDSLKGSNESLMRQMRDMEDRHGREAGALQDTIARLEAEIANMK 380
Query: 248 TEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM L++Y++L+ +K+ LDVEIA YR L+E EES +
Sbjct: 381 DEMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRI 418
>gi|332232945|ref|XP_003265663.1| PREDICTED: intermediate filament tail domain-containing protein 1
isoform 2 [Nomascus leucogenys]
Length = 388
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + + G+ + ++F + +
Sbjct: 139 QFTSSSLGDVEIAEVNVKGLFVKLINSSFDKEMAIGDHILQQNMNGQTISLYRFLPNIVM 198
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 199 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 245
>gi|355564199|gb|EHH20699.1| hypothetical protein EGK_03612 [Macaca mulatta]
Length = 471
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 311 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 370
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES 283
EM L++Y+EL+ +K+ LD+EIA YR L+E EES
Sbjct: 371 EMARHLREYQELLNVKMALDIEIATYRKLLEGEES 405
>gi|300795165|ref|NP_001178909.1| intermediate filament tail domain-containing protein 1 [Rattus
norvegicus]
Length = 410
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q SS+ G+++I EV+ G FV+L N +E E +GN+ L + V G+ + ++F + +
Sbjct: 169 QFVSSSLGDIKIAEVNVKGFFVRLVNSSNEKEVEIGNYILQQNVNGQAVSLYRFPHNITM 228
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
+A GTVTVW+ E +P + + +F S + +TIL GE
Sbjct: 229 QASGTVTVWAAASEAKPQQPTDFVWEEQSRFRSSPDCTTILCKPSGE 275
>gi|332232951|ref|XP_003265666.1| PREDICTED: intermediate filament tail domain-containing protein 1
isoform 5 [Nomascus leucogenys]
Length = 291
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + + G+ + ++F + +
Sbjct: 42 QFTSSSLGDVEIAEVNVKGLFVKLINSSFDKEMAIGDHILQQNMNGQTISLYRFLPNIVM 101
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 102 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 148
>gi|332232949|ref|XP_003265665.1| PREDICTED: intermediate filament tail domain-containing protein 1
isoform 4 [Nomascus leucogenys]
Length = 325
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + + G+ + ++F + +
Sbjct: 76 QFTSSSLGDVEIAEVNVKGLFVKLINSSFDKEMAIGDHILQQNMNGQTISLYRFLPNIVM 135
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 136 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 182
>gi|308482245|ref|XP_003103326.1| hypothetical protein CRE_27588 [Caenorhabditis remanei]
gi|308260116|gb|EFP04069.1| hypothetical protein CRE_27588 [Caenorhabditis remanei]
Length = 581
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 62/104 (59%), Gaps = 4/104 (3%)
Query: 71 SAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
SAKG++ I E P+GK+V + N ++E+ LG+W+L RK+ G+ + F F ++A
Sbjct: 462 SAKGSIIIKESSPEGKYVVIENTNRNKEEPLGDWKLKRKIDGKREIIFTFPSDYVLQASQ 521
Query: 130 TVTVWSFNVEGATHEPPHNIVMK-NQKFGSGDEISTILLNTDGE 172
+V +++ T PP ++V + + FG G + TIL N++GE
Sbjct: 522 SVKIFARG--HGTANPPESLVFEGDDTFGVGSNVLTILYNSNGE 563
>gi|148678744|gb|EDL10691.1| RIKEN cDNA 4933403M22 [Mus musculus]
Length = 375
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G ++I EV+ G FV+L N +E E +GN L + V G + ++F + +
Sbjct: 172 QFTSSSLGEIKIAEVNIKGLFVRLVNSSNEKEVEIGNHILQQNVNGRAVSLYQFPDNITL 231
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A +PP + V + Q KF S + +TIL +GE
Sbjct: 232 QANSTVTVWAAASE-AKPQPPTDFVWEGQSKFRSSPDCTTILCKPNGE 278
>gi|71011081|gb|AAZ17412.1| mutant desmin [Homo sapiens]
Length = 470
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+
Sbjct: 320 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKD 379
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ L VEIA YR L+E EES +LP
Sbjct: 380 EMARHLREYQDLLNVKMALYVEIATYRKLLEGEESRINLP 419
>gi|359323107|ref|XP_003640000.1| PREDICTED: intermediate filament tail domain-containing protein
1-like [Canis lupus familiaris]
Length = 478
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q SSA G+++I EV+ G FVKL N +E +G L + V G+ + ++F + +
Sbjct: 226 QSRSSALGDIKIAEVNVKGLFVKLINSSLDKELEIGGHILQQNVNGQTISLYRFLPNIVM 285
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + + Q KF +G +TIL +GE
Sbjct: 286 QANCTVTVWAAASE-AKHQPPSDFLWREQNKFKTGPNCTTILCKPNGE 332
>gi|345312684|ref|XP_001513233.2| PREDICTED: desmin-like, partial [Ornithorhynchus anatinus]
Length = 216
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +ELE++ E Q AR+E EI+ L+
Sbjct: 107 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEERFAGEANGYQDSIARLEEEIRHLKD 166
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 167 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP 206
>gi|17221340|emb|CAC83053.1| desmin [Oncorhynchus mykiss]
Length = 459
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + +E+ED++ E Q R+EAEI +++ EM L++Y++
Sbjct: 316 YTCEIDSLKGTNESLLRQMREMEDRLGNEAGGYQDSVTRLEAEIAKMKDEMARHLREYQD 375
Query: 260 LMEIKINLDVEIAQYRNLMEAEESSL 285
L+ +K+ LD+EIA YR L+E EES +
Sbjct: 376 LLNVKMALDIEIATYRKLLEGEESRI 401
>gi|194211787|ref|XP_001498747.2| PREDICTED: intermediate filament tail domain-containing protein
1-like [Equus caballus]
Length = 452
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q SSA G+++I EV+ G FVKL N +E +G+ L + V G++ ++F + +
Sbjct: 170 QSRSSALGDIKIAEVNVKGLFVKLINSSLDKELEIGDHILQQNVNGQIICLYRFLPNIIM 229
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + +TIL +GE
Sbjct: 230 QANSTVTVWAAASE-AKHQPPADFLWKEQNKFKTSPNCTTILCKPNGE 276
>gi|348569200|ref|XP_003470386.1| PREDICTED: intermediate filament tail domain-containing protein
1-like [Cavia porcellus]
Length = 587
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAG 128
SSA +++I EVD G FVKL N + E +GN L + V+G+ + ++F + ++A
Sbjct: 167 SSALADIKIAEVDVKGLFVKLTNSSPDKEVEIGNCSLQQNVKGQALSLYRFPPNVVMQAD 226
Query: 129 GTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
TVTVW+ G H+PP + + K Q F + +TIL +GE
Sbjct: 227 STVTVWAGASNGK-HQPPSDFLWKEQNMFRTSPNCTTILCRPNGE 270
>gi|407261420|ref|XP_003946255.1| PREDICTED: intermediate filament tail domain-containing protein
1-like isoform 1 [Mus musculus]
gi|407261422|ref|XP_003946256.1| PREDICTED: intermediate filament tail domain-containing protein
1-like isoform 2 [Mus musculus]
Length = 347
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G ++I EV+ G FV+L N +E E +GN L + V G + ++F + +
Sbjct: 172 QFTSSSLGEIKIAEVNIKGLFVRLVNSSNEKEVEIGNHILQQNVNGRAVSLYQFPDNITL 231
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A +PP + V + Q KF S + +TIL +GE
Sbjct: 232 QANSTVTVWAAASE-AKPQPPTDFVWEGQSKFRSSPDCTTILCKPNGE 278
>gi|21311843|ref|NP_083018.1| intermediate filament tail domain-containing protein 1 [Mus
musculus]
gi|81905116|sp|Q9D4C1.1|ILFT1_MOUSE RecName: Full=Intermediate filament tail domain-containing protein
1; AltName: Full=Lamin-A-related sequence 1 protein
gi|12855488|dbj|BAB30353.1| unnamed protein product [Mus musculus]
gi|31419760|gb|AAH53420.1| Intermediate filament tail domain containing 1 [Mus musculus]
Length = 413
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G ++I EV+ G FV+L N +E E +GN L + V G + ++F + +
Sbjct: 172 QFTSSSLGEIKIAEVNIKGLFVRLVNSSNEKEVEIGNHILQQNVNGHAVSLYQFPDNITL 231
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A +PP + V + Q KF S + +TIL +GE
Sbjct: 232 QANSTVTVWAAASE-AKPQPPTDFVWEEQSKFRSSPDCTTILCKPNGE 278
>gi|341900421|gb|EGT56356.1| hypothetical protein CAEBREN_11292 [Caenorhabditis brenneri]
Length = 524
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 54 EEYES-EERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYN-KGSEEQSLGNWQLVRKVQG 111
+ Y+S E +T S F+ AKGN+ I E DP+GK++ L N GS + + ++++ R + G
Sbjct: 392 DHYDSGEVQTRSTFK--RHAKGNVSIVECDPNGKYIILENTSGSIAEDVSHFEIRRVIDG 449
Query: 112 EVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTD 170
+F I G + ++ N G H PP +IVM++ +G+G + T L NT
Sbjct: 450 TQAFTFHLPTHSLIHPHGHLKIYGRNA-GGIHSPPDSIVMESHPSWGTGAVVETFLYNTH 508
Query: 171 G 171
G
Sbjct: 509 G 509
>gi|118453|sp|P02542.1|DESM_CHICK RecName: Full=Desmin
Length = 463
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 67/114 (58%), Gaps = 10/114 (8%)
Query: 181 DNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKF 236
D LR+ + +L E + + Y E++ L+ N L + +E+E++ E Q
Sbjct: 303 DALRQAKQEML----EYRHQIQSYTCEIDALKGTNDSLMRQMREMEERFAGEAGGYQDTI 358
Query: 237 ARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
AR+E EI+ L+ EM L++Y++L+ +K+ LDVEIA YR L+E EE+ S+P +
Sbjct: 359 ARLEEEIRHLKDEMARHLREYQDLLNVKMALDVEIATYRKLLEGEENRISIPMH 412
>gi|17568557|ref|NP_510648.1| Protein MUA-6 [Caenorhabditis elegans]
gi|42558939|sp|O02365.1|IFA2_CAEEL RecName: Full=Intermediate filament protein ifa-2; AltName:
Full=Cel IF A2; AltName: Full=Intermediate filament
protein A2; Short=IF-A2
gi|2198433|emb|CAA50183.1| Cytoplasmic intermediate filament (IF) protein [Caenorhabditis
elegans]
gi|3880589|emb|CAB03486.1| Protein MUA-6 [Caenorhabditis elegans]
Length = 581
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 71 SAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
SAKGN+ I E P+GKFV L N ++E+ LG+W+L RK+ G+ + F F +
Sbjct: 464 SAKGNVAIKETSPEGKFVILENTHRAKEEPLGDWKLKRKIDGKREIVFTFPSDYILHPFQ 523
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
+V +++ +G + P I ++ FG G + TIL N GE
Sbjct: 524 SVKIFARG-QGIANPPEVLIFEGDETFGVGANVQTILYNNKGE 565
>gi|54288510|gb|AAV31718.1| lanin A-related sequence 1 protein [Mus musculus]
Length = 413
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G ++I EV+ G FV+L N +E E +GN L + V G + ++F + +
Sbjct: 172 QFTSSSLGEIKIAEVNIKGLFVRLVNSSNEKEVEIGNHILQQNVNGRAVSLYQFPDNITL 231
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A +PP + V + Q KF S + +TIL +GE
Sbjct: 232 QANSTVTVWAAASE-AKPQPPTDFVWEGQSKFRSSPDCTTILCKPNGE 278
>gi|26342446|dbj|BAC34885.1| unnamed protein product [Mus musculus]
Length = 312
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G ++I EV+ G FV+L N +E E +GN L + V G + ++F + +
Sbjct: 122 QFTSSSLGEIKIAEVNIKGLFVRLVNSSNEKEVEIGNHILQQNVNGHAVSLYQFPDNITL 181
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A +PP + V + Q KF S + +TIL +GE
Sbjct: 182 QANSTVTVWAAASE-AKPQPPTDFVWEEQSKFRSSPDCTTILCKPNGE 228
>gi|403269188|ref|XP_003926636.1| PREDICTED: intermediate filament tail domain-containing protein 1
isoform 1 [Saimiri boliviensis boliviensis]
Length = 418
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G+++I EV+ G F+KL N +E ++G+ L + V G+ + ++F + +
Sbjct: 162 QCTSSSLGDVKIAEVNVKGLFIKLINSSLDKEMAIGDHILQQNVNGQTISLYQFLPNIIM 221
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 222 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCEPNGQ 268
>gi|12275186|emb|CAC22331.1| intermediate filament protein type III [Lampetra fluviatilis]
Length = 473
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 6/88 (6%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
E++ L+ N L + +E+ED+ E Q AR+E +I+ L+ EMT L++Y+EL+
Sbjct: 335 CEIDALKGGNESLERQMREMEDRFGLEAAGYQDTIARLEDDIRNLKDEMTRHLREYQELL 394
Query: 262 EIKINLDVEIAQYRNLMEAEES--SLPT 287
+K+ LD+EIA YR L+E EE+ +LP
Sbjct: 395 NVKMALDIEIATYRKLLEGEETRIALPV 422
>gi|268577317|ref|XP_002643640.1| Hypothetical protein CBG16384 [Caenorhabditis briggsae]
Length = 581
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 71 SAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
SAKGN+ I E DGKFV L N S+E+ LG+W+L RK+ G+ + F F ++
Sbjct: 462 SAKGNVSIEESCADGKFVILRNTNTSKEEPLGDWKLKRKIDGKREIVFTFPSDYILQPSK 521
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
TV +++ G P + FG G I TIL N GE
Sbjct: 522 TVKIFARG-HGVASLPDTLVFEGEDNFGVGANIQTILYNNKGE 563
>gi|3201513|emb|CAA11446.1| intermediate filament protein D1 [Branchiostoma lanceolatum]
Length = 620
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 11/107 (10%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQI----EYEQSKFA-------RMEA 241
+L + + KY ++ L++ + RN++LE Q+ E +SK A +EA
Sbjct: 333 DLADARSELSKYQNQIARLQSEIESMKNRNRQLEGQLKNVEESGKSKLADKQAEIEALEA 392
Query: 242 EIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPTY 288
E++RL+ E+++Q+++Y+EL +K+ LDVEIA YR L+E EES L +
Sbjct: 393 ELQRLRGEISKQMREYQELHNVKMALDVEIAAYRKLLEGEESRLHGF 439
>gi|2959450|dbj|BAA25132.1| desmin [Gallus gallus]
Length = 448
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 67/114 (58%), Gaps = 10/114 (8%)
Query: 181 DNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKF 236
D LR+ + +L E + + Y E++ L+ N L + +E+E++ E Q
Sbjct: 295 DALRQAKQEML----EYRHQIQSYTCEIDALKGTNDSLMRQMREMEERFAGEAGGYQDTI 350
Query: 237 ARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
AR+E EI+ L+ EM L++Y++L+ +K+ LDVEIA YR L+E EE+ S+P +
Sbjct: 351 ARLEEEIRHLKDEMARHLREYQDLLNVKMALDVEIATYRKLLEGEENRISIPMH 404
>gi|17533061|ref|NP_495134.1| Protein IFB-2, isoform c [Caenorhabditis elegans]
gi|373219029|emb|CCD65034.1| Protein IFB-2, isoform c [Caenorhabditis elegans]
Length = 526
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Query: 59 EERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYN-KGSEEQSLGNWQLVRKVQGEVKTSF 117
E +T S F+ AKGN+ I E DP GK++ L N GS + + N+++ R + G F
Sbjct: 400 EVQTRSSFK--RHAKGNVSIVECDPQGKYIILENTSGSVAEDVSNFEIRRVIDGVQAFVF 457
Query: 118 KFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDG 171
+ L I+ G + ++ N G + PP +IVM++ +G G ++ T L N+ G
Sbjct: 458 RLPSHLVIQQHGHLKIYGRN-SGGINSPPDSIVMESHPSWGQGGQVETFLYNSHG 511
>gi|3201497|emb|CAA11448.1| intermediate filament protein D1 [Branchiostoma floridae]
Length = 620
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 11/117 (9%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEY-------- 231
D+L++ +L + + KY ++ L++ + RN++LE Q++
Sbjct: 318 FDDLQRSSGKNTNDLADARAELSKYQNQIARLQSEIESMKNRNRQLEGQLKNVEESGATK 377
Query: 232 ---EQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+Q++ +EAE++RL+ E+ +Q+K+Y EL +K+ LDVEIA YR L+E EES L
Sbjct: 378 LAEKQAEIEALEAELQRLRGEINKQMKEYAELQNVKMALDVEIAAYRKLLEGEESRL 434
>gi|348549938|ref|XP_003460790.1| PREDICTED: hypothetical protein LOC100720465, partial [Cavia
porcellus]
Length = 789
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Query: 181 DNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKF---- 236
D K S+ EL+E + R +++ L++ ER +ELE + EQ KF
Sbjct: 578 DQNDKAASAAREELQEARVRMESLGFQLSSLQSKASAAEERTRELEAALAGEQDKFRALL 637
Query: 237 ARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
A E E+ +++ M +QL +Y+EL+++K+ LDVEI+ YR L+E EE L
Sbjct: 638 ATKEQEMTQMRDAMQQQLAEYQELLDVKLALDVEISAYRKLLEGEEERL 686
>gi|348518121|ref|XP_003446580.1| PREDICTED: desmin-like isoform 2 [Oreochromis niloticus]
Length = 489
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + +++ED+ E Q AR+EAEI ++ EM L++Y++
Sbjct: 330 YTCEIDSLKGTNESLMRQMRDMEDRHGREAGTYQDNIARLEAEIANMKDEMARHLREYQD 389
Query: 260 LMEIKINLDVEIAQYRNLMEAEES--SLP 286
L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 390 LLNVKMALDVEIATYRKLLEGEESRIALP 418
>gi|3676232|emb|CAA75347.1| desmin [Scyliorhinus stellaris]
gi|17221342|emb|CAC83054.1| desmin [Scyliorhinus stellaris]
Length = 455
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQT 248
E+ E + + Y E++ L+ +N L + +E+E++ E + + AR+E EI+ L+
Sbjct: 304 EVMEYRHQVQSYTCEIDALKGSNESLMRQMREMEERFAGEAAGYTDSIARLEEEIRHLKD 363
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM L++Y++L+ +K+ LDVEIA YR L+E EES +
Sbjct: 364 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRI 400
>gi|47226295|emb|CAG09263.1| unnamed protein product [Tetraodon nigroviridis]
Length = 683
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + +++ED++ E S + R+EA+I +++ +M L++Y++
Sbjct: 538 YTCEIDSLKGTNESLLRQMRDMEDRMGREASGYQDTIGRLEADIAKMKDDMARHLREYQD 597
Query: 260 LMEIKINLDVEIAQYRNLMEAEESSLPT 287
L+ +K+ LD+EIA YR L+E EES + T
Sbjct: 598 LLNVKMALDIEIATYRKLLEGEESRITT 625
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 56/86 (65%), Gaps = 4/86 (4%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + +++ED++ E S + R+EA+I +++ +M L++Y++
Sbjct: 108 YTCEIDSLKGTNESLLRQMRDMEDRMGREASGYQDTIGRLEADIAKMKDDMARHLREYQD 167
Query: 260 LMEIKINLDVEIAQYRNLMEAEESSL 285
L+ +K+ LD+EIA YR L+E EESS
Sbjct: 168 LLNVKMALDIEIATYRKLLEGEESSF 193
>gi|32452109|emb|CAD38128.1| desmin [Acipenser baerii]
Length = 461
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +E+E++ E Q +R+EAEI ++
Sbjct: 309 EMMEYRHQIQSYTCEIDSLKGTNDSLMRQMREMEERFSGEASGYQDNISRLEAEIANMKD 368
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EE+ SLP
Sbjct: 369 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEENRVSLP 408
>gi|829165|emb|CAA55296.1| cytoplasmic intermediate filament protein [Caenorhabditis elegans]
Length = 543
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Query: 59 EERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYN-KGSEEQSLGNWQLVRKVQGEVKTSF 117
E +T S F+ AKGN+ I E DP GK++ L N GS + + N+++ R + G F
Sbjct: 417 EVQTRSSFK--RHAKGNVSIVECDPQGKYIILENTSGSVAEDVSNFEIRRVIDGVQAFVF 474
Query: 118 KFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDG 171
+ L I+ G + ++ N G + PP +IVM++ +G G ++ T L N+ G
Sbjct: 475 RLPSHLVIQQHGHLKIYGRN-SGGINSPPDSIVMESHPSWGQGGQVETFLYNSHG 528
>gi|17533059|ref|NP_495133.1| Protein IFB-2, isoform a [Caenorhabditis elegans]
gi|46576383|sp|Q19286.1|IFB2_CAEEL RecName: Full=Intermediate filament protein ifb-2; AltName:
Full=Cel IF B2; AltName: Full=Intermediate filament
protein B2; Short=IF-B2
gi|373219028|emb|CCD65033.1| Protein IFB-2, isoform a [Caenorhabditis elegans]
Length = 543
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Query: 59 EERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYN-KGSEEQSLGNWQLVRKVQGEVKTSF 117
E +T S F+ AKGN+ I E DP GK++ L N GS + + N+++ R + G F
Sbjct: 417 EVQTRSSFK--RHAKGNVSIVECDPQGKYIILENTSGSVAEDVSNFEIRRVIDGVQAFVF 474
Query: 118 KFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDG 171
+ L I+ G + ++ N G + PP +IVM++ +G G ++ T L N+ G
Sbjct: 475 RLPSHLVIQQHGHLKIYGRN-SGGINSPPDSIVMESHPSWGQGGQVETFLYNSHG 528
>gi|348518119|ref|XP_003446579.1| PREDICTED: desmin-like isoform 1 [Oreochromis niloticus]
Length = 470
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + +++ED+ E Q AR+EAEI ++ EM L++Y++
Sbjct: 330 YTCEIDSLKGTNESLMRQMRDMEDRHGREAGTYQDNIARLEAEIANMKDEMARHLREYQD 389
Query: 260 LMEIKINLDVEIAQYRNLMEAEES--SLP 286
L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 390 LLNVKMALDVEIATYRKLLEGEESRIALP 418
>gi|224054848|ref|XP_002196069.1| PREDICTED: desmin [Taeniopygia guttata]
Length = 339
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 67/114 (58%), Gaps = 10/114 (8%)
Query: 181 DNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKF 236
D LR+ + +L E + + Y E++ L+ N L + +E+E++ E Q
Sbjct: 179 DALRQAKQEML----EYRHQIQSYTCEIDALKGTNDSLMRQMREMEERFAGEAGGYQDTI 234
Query: 237 ARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
AR+E EI+ L+ EM L++Y++L+ +K+ LDVEIA YR L+E EE+ S+P +
Sbjct: 235 ARLEEEIRHLKDEMARHLREYQDLLNVKMALDVEIATYRKLLEGEENRISIPMH 288
>gi|327260418|ref|XP_003215031.1| PREDICTED: desmin-like [Anolis carolinensis]
Length = 462
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + +E+E++ E Q R+E EI+ L+
Sbjct: 312 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMREMEERFAGEAGTYQDTIQRLEEEIRHLKD 371
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES SLP
Sbjct: 372 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRISLP 411
>gi|33186832|tpe|CAE00502.1| TPA: desmin [Takifugu rubripes]
Length = 451
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + +++ED++ E Q R+EA+I +++ +M L++Y++
Sbjct: 306 YTCEIDSLKGTNESLLRQMRDMEDRMGCEATSYQDTIGRLEADIAKMKDDMARHLREYQD 365
Query: 260 LMEIKINLDVEIAQYRNLMEAEESSLPT 287
L+ +K+ LD+EIA YR L+E EES + T
Sbjct: 366 LLNVKMALDIEIATYRKLLEGEESRITT 393
>gi|348507695|ref|XP_003441391.1| PREDICTED: protein timeless homolog [Oreochromis niloticus]
Length = 1716
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E E++ + + E++ L+ N L + +E+EDQ E Q R+E EI+ L+
Sbjct: 309 EANESRRQIQSLNCEIDALKNTNEALLRQMREIEDQFGNEAANYQDNIGRLEDEIRHLKE 368
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LD+EIA YR L+E EES S+P
Sbjct: 369 EMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISVP 408
>gi|444515373|gb|ELV10872.1| Peripherin [Tupaia chinensis]
Length = 431
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 62/102 (60%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ LR N L + +ELE+Q E Q+ AR+E E+++L+
Sbjct: 272 EMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKE 331
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y+EL+ +K+ LD+EIA YR L+E E S+P +
Sbjct: 332 EMARHLREYQELLNVKMALDIEIATYRKLLEGEARXISVPVH 373
>gi|47213126|emb|CAF96621.1| unnamed protein product [Tetraodon nigroviridis]
Length = 585
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 97 EQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-K 155
+Q +G+W+L R+V + +KF ++AG +VTVWS + G H PP +++ K Q
Sbjct: 494 DQPMGSWRLKRQVDFGEELIYKFTPKFVLKAGQSVTVWSLDA-GVAHSPPTDLLWKTQAS 552
Query: 156 FGSGDEISTILLNTDGE 172
+GSG + T L+N DGE
Sbjct: 553 WGSGTHMVTSLINGDGE 569
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQT 248
EL E++ R + ++N L+ +R +ELE+ + E+ K R E E+ L+
Sbjct: 343 ELLESRLRLERLGEKLNALQKQVSVSEDRIRELEEILSAERDKHRRDMERKEEEMAELRE 402
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
M QL +Y+EL+++K+ LD+EI YR L+E EE
Sbjct: 403 MMNTQLSEYQELLDVKLALDMEINAYRKLLEGEE 436
>gi|383617669|gb|AFH41832.1| desmin [Sternopygus macrurus]
Length = 470
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + +E+E+++ E Q R+EAEI +++ EM L++Y++
Sbjct: 326 YTCEIDSLKGTNESLIRQMREMEERMGREAGGYQDTITRLEAEIGKMKDEMARHLREYQD 385
Query: 260 LMEIKINLDVEIAQYRNLMEAEES--SLPT 287
L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 386 LLNVKMALDVEIATYRKLLEGEESRITLPA 415
>gi|338856621|gb|AEJ32549.1| desmin [Anas platyrhynchos]
Length = 302
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 67/114 (58%), Gaps = 10/114 (8%)
Query: 181 DNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKF 236
D LR+ + +L E + + Y E++ L+ N L + +E+E++ E Q
Sbjct: 160 DALRQAKQEML----EYRHQIQSYTCEIDALKGTNDSLMRQMREMEERFAGEAGGYQDTI 215
Query: 237 ARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
AR+E EI+ L+ EM L++Y++L+ +K+ LDVEIA YR L+E EE+ S+P +
Sbjct: 216 ARLEEEIRHLKDEMARHLREYQDLLNVKMALDVEIATYRKLLEGEENRISIPMH 269
>gi|47218563|emb|CAG10262.1| unnamed protein product [Tetraodon nigroviridis]
Length = 473
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 6/89 (6%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + +++ED+ E S + +R+EAEI ++ EM L++Y++
Sbjct: 333 YTCEIDSLKGTNDSLMRQMRDMEDRHGLEASGYQDTISRLEAEIANMKDEMARHLREYQD 392
Query: 260 LMEIKINLDVEIAQYRNLMEAEES--SLP 286
L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 393 LLNVKMALDVEIATYRKLLEGEESRIALP 421
>gi|341902188|gb|EGT58123.1| hypothetical protein CAEBREN_03292 [Caenorhabditis brenneri]
Length = 581
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 71 SAKGNMEITEVDPDGKFVKLYN--KGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAG 128
SAKGN+ I E PDGKFV L N +G EE +G+W+L RK+ G+ + F F +
Sbjct: 464 SAKGNVSIKETSPDGKFVILENTHRGKEE-PIGDWKLKRKIDGKREIVFTFPSDYVLLPF 522
Query: 129 GTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+V + + PP +V + + FG G + TIL N GE
Sbjct: 523 QSVKILARG--NGVSNPPEVLVFEGEDSFGVGANVQTILYNNKGE 565
>gi|327277049|ref|XP_003223278.1| PREDICTED: peripherin-like [Anolis carolinensis]
Length = 349
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 60/101 (59%), Gaps = 6/101 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E++ + E++ L+ N L + +++EDQ E Q AR+E EI ++
Sbjct: 196 EMNESRRQIQSLTCEVDGLKGTNEALLRQMRDMEDQYGAEVASYQDNVARLEQEIHHMKE 255
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPT 287
EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 256 EMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPV 296
>gi|308493469|ref|XP_003108924.1| CRE-IFB-1 protein [Caenorhabditis remanei]
gi|308247481|gb|EFO91433.1| CRE-IFB-1 protein [Caenorhabditis remanei]
Length = 589
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 67/113 (59%), Gaps = 5/113 (4%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFH 120
T + FQ SAKGN+ I+E DP+GKF+K+ N ++++++G ++ RK+ G + +
Sbjct: 466 TKTTFQ--RSAKGNVTISECDPNGKFIKIENSSRNKDENVGEHKIKRKLDGRREIVYTIP 523
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
+ I+ +T+++ + +G + PP ++V + +G G + T L+N DGE
Sbjct: 524 ANVTIKPLKNLTIYARD-QGGINNPPESLVFDGENTWGIGANVVTSLVNKDGE 575
>gi|221048069|gb|ACL98142.1| desmin [Epinephelus coioides]
Length = 155
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + +++ED++ E S + +R+E +I +++ +M L++Y++
Sbjct: 10 YTCEIDSLKGTNESLLRQMRDMEDRMGREASSYQDTISRLEEDIAKMKDDMARHLREYQD 69
Query: 260 LMEIKINLDVEIAQYRNLMEAEESSLPT 287
L+ +K+ LD+EIA YR L+E EES + T
Sbjct: 70 LLNVKMALDIEIATYRKLLEGEESRITT 97
>gi|347944084|gb|AEP27810.1| Hau-cytoplasmic intermediate filament 2 [Helobdella sp. Austin]
Length = 437
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 71 SAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGT 130
SAKG + I E PDG ++ L N G E++LGNW + R V G +I +G
Sbjct: 334 SAKGPIAIAESSPDGTYICLENTGRREENLGNWTIRRIVNGNSMPVANLPSDFRIASGAK 393
Query: 131 VTVWSFNVEGATHEPPHNIVMKN-QKFGSGDEISTILLNTDGE 172
V V++ +++ + N FG G++I T L NT GE
Sbjct: 394 VKVYARGTR-PRDSSMYDVELYNYSTFGQGEDIKTYLCNTSGE 435
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 10/103 (9%)
Query: 183 LRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAE 242
LR + S + +L E + R+ E+++L+ R +ELE + E R+ +E
Sbjct: 133 LRSQYSDIQSKLFELQSRNDNLQREIDDLKQEK---QARERELETENE-------RLISE 182
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ L+ EM ++ ++L++ K+ L++EIA YR L+E EE +
Sbjct: 183 VAALKAEMESITRELQDLLDAKLGLELEIAAYRKLLEGEEDKI 225
>gi|195996155|ref|XP_002107946.1| hypothetical protein TRIADDRAFT_63507 [Trichoplax adhaerens]
gi|190588722|gb|EDV28744.1| hypothetical protein TRIADDRAFT_63507 [Trichoplax adhaerens]
Length = 458
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGS-EEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAG 128
S G + I +VDP+G FV+L+N S ++ LG +Q+ ++ +G + SF+F T + A
Sbjct: 245 SCTTGTVVIADVDPNGYFVQLHNISSNQDVELGLFQIQQRTEGHIMASFQFPITFTLAAE 304
Query: 129 GTVTVWSFNVEGATHEPPHNIV-MKNQKFGSGDEISTILLNTDGE 172
VTVW+ + + H PP +++ +K +++ TIL +G+
Sbjct: 305 SKVTVWAADSQHP-HRPPLDVLWIKEKRWPVSPNCMTILCKPNGQ 348
>gi|351708544|gb|EHB11463.1| Intermediate filament tail domain-containing protein 1
[Heterocephalus glaber]
Length = 371
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAG 128
SS+ G+++I EV+ G FVKL N +E +GN L + V+G+ + ++F + + A
Sbjct: 132 SSSLGDIQIAEVNVKGLFVKLINSSLDKEVRIGNHILQQNVEGQAVSLYRFLPNVIMRAS 191
Query: 129 GTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
TVTVW+ +G H+PP + + K Q F + + +TIL +GE
Sbjct: 192 STVTVWAAASKGK-HQPPSDFLWKEQSTFRASPDCTTILCKPNGE 235
>gi|349802117|gb|AEQ16531.1| putative desmin 1 [Pipa carvalhoi]
Length = 246
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 66/112 (58%), Gaps = 10/112 (8%)
Query: 181 DNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKF 236
D+LR+ + E+ E + + Y E++ L+ N L + ++LE++ E Q
Sbjct: 91 DSLRQAKQ----EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRDLEERFAGEAAGYQDSI 146
Query: 237 ARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
R+E EI+ L+ EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 147 TRLEEEIRNLKDEMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRITLP 198
>gi|4761084|gb|AAD29247.1|AF101064_1 intermediate filament macrolin [Hirudo medicinalis]
Length = 649
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHR 121
T+S V S+KG + I E DGKF+ L N G +++ LG +++ R + G K F F R
Sbjct: 501 TTSKTSVQKSSKGPVAIAECSMDGKFIVLENTGRKDEQLGGYKIRRNINGLDKVEFNFDR 560
Query: 122 TLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
+ AG + +W+ + + ++ +G G+ I T L+N GE
Sbjct: 561 NFVLRAGAKIKIWANKLRPLSA-FSSDLEADFPSWGVGERIVTGLINQSGE 610
>gi|391330997|ref|XP_003739937.1| PREDICTED: ATP-dependent RNA helicase DRS1-like [Metaseiulus
occidentalis]
Length = 972
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 25/152 (16%)
Query: 60 ERTSSGFQVTSSAKGNMEITE--------VDPD---GKFVKLYNKGSEEQSLGNWQLVRK 108
+R SS F T S G++E VD D GK V L N E+ LG W++ K
Sbjct: 794 KRLSSAFDSTES-HGDVECVHESVGPLNIVDHDVLHGKQVTLENTSEEDIQLGGWKITHK 852
Query: 109 VQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFG-----SGD-EI 162
G + + KF + +I+A +T+WS + GA+H PP + V+K +F +GD E+
Sbjct: 853 -SGAHEAAHKFPQRFRIKAKSKMTLWSSD-SGASHNPPSDYVLKGIRFPPDENQTGDIEV 910
Query: 163 STILLNT-DGELA----NQERIIDNLRKEQSS 189
+T +LN D E+A Q R + R+ S
Sbjct: 911 TTTILNQEDAEMAKRVSKQRRFVTRTRRSHLS 942
>gi|291190359|ref|NP_001167362.1| Plasticin [Salmo salar]
gi|223649438|gb|ACN11477.1| Plasticin [Salmo salar]
Length = 489
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
E++ L++ N L + +E+EDQ E Q R+E EI L+ EM L++Y++L+
Sbjct: 334 CEIDALKSTNEALLRQMREMEDQFGVEANNYQDNVGRLEEEIHHLKDEMARHLREYQDLL 393
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 394 NVKMALDIEIATYRKLLEGEESRI 417
>gi|395750153|ref|XP_002828467.2| PREDICTED: lamin-B2 [Pongo abelii]
Length = 550
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 21/133 (15%)
Query: 23 MNVSGAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQV-------------- 68
+ VS A SSS + G + SK+++L + EE SG V
Sbjct: 412 VTVSRATSSSRGSMSATGRLGRSKRKRLEV------EEPLGSGPSVLGTGTGGSGGFHLA 465
Query: 69 -TSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEA 127
+SA G++ I E+D +GKFV+L N ++QSLGNW++ R+V + ++KF + A
Sbjct: 466 QQASASGSVSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYVLRA 525
Query: 128 GGTVTVWSFNVEG 140
G VT F+ +G
Sbjct: 526 GQMVTEDLFHQQG 538
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF +M E E+ ++
Sbjct: 306 ELKEARMRLESLSYQLSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRD 365
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M +QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 366 VMQQQLAEYQELLDVKLALDMEINAYRKLLEGEEERL 402
>gi|16660147|gb|AAL27546.1|AF397015_1 nuclear lamin LIII [Danio rerio]
Length = 584
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Query: 62 TSSGFQVT------SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEV-K 114
T SGF SS +G + I EVD DG+++KL N +Q + WQL RK + E
Sbjct: 423 TCSGFSPNYRLSQHSSCRGPVSIEEVDLDGRYIKLKNASDRDQVVSGWQL-RKSEAEAPD 481
Query: 115 TSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
F F + AG +TVW+ ++ +Q +GS ++ LLNT E
Sbjct: 482 IVFCFPSPCVMNAGHMLTVWAAAAVDQCGSASDLLLSTHQSWGSFADVRVSLLNTQNE 539
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQ----SKFARMEAEIKRLQT 248
EL TK R ++N L+ L R EL+ +E+E+ K + + E+ L+
Sbjct: 300 ELAGTKLRLESQTQQINNLQKQVVCLEARVLELQQTLEHERQVSQQKLSLQQQEMAALRL 359
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M EQL++Y L+++K+ LD+EI YR ++E EE L
Sbjct: 360 QMQEQLEEYENLLDVKLMLDMEINAYRKMLEGEEKRL 396
>gi|45360995|ref|NP_989134.1| desmin, gene 1 [Xenopus (Silurana) tropicalis]
gi|38511808|gb|AAH61361.1| desmin, gene 1 [Xenopus (Silurana) tropicalis]
gi|89272455|emb|CAJ82686.1| desmin [Xenopus (Silurana) tropicalis]
Length = 458
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 66/112 (58%), Gaps = 10/112 (8%)
Query: 181 DNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKF 236
D+LR+ + E+ E + + Y E++ L+ N L + ++LE++ E Q
Sbjct: 300 DSLRQAKQ----EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRDLEERFSGEAAGYQDSI 355
Query: 237 ARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
R+E EI+ ++ EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 356 GRLEEEIRNMKDEMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRITLP 407
>gi|348515631|ref|XP_003445343.1| PREDICTED: desmin-like [Oreochromis niloticus]
Length = 475
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + +++ED++ E Q R+E +I +++ +M L++Y++
Sbjct: 330 YTCEIDSLKGTNESLLRQMRDMEDRMAREATGYQDTITRLEEDIAKMKDDMARHLREYQD 389
Query: 260 LMEIKINLDVEIAQYRNLMEAEESSLPT 287
L+ +K+ LD+EIA YR L+E EES + T
Sbjct: 390 LLNVKMALDIEIATYRKLLEGEESRITT 417
>gi|47213920|emb|CAF90743.1| unnamed protein product [Tetraodon nigroviridis]
Length = 543
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 11 EVQKKRKTELLCMNVSGAGSSSVAGTPSRGSV-APSKKRKLNILEEYESEERTSSGFQVT 69
EV+++R L ++ S + ++VA T RG KKRK E S +
Sbjct: 371 EVEEQR----LHLSPSPSQPAAVARTHERGGCRIRGKKRK----RESASGSSPACKLSTC 422
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
SS KG + + EVD +GK+V+L N EQ LG W + R SF + ++AG
Sbjct: 423 SSQKGCVSVAEVDVNGKYVRLKNDSDVEQPLGGWVVRRSYSDSGDISFHIPSSCILDAGQ 482
Query: 130 TVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGELANQE 177
T+T+W+ A + I+ ++ +G ++ LLN + E+ E
Sbjct: 483 TLTIWA-AAAEAEADSGDLILQSHRSWGPVTDVRVSLLNPNREVMEME 529
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 35/53 (66%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
Q K + E+ +++++M QL+DY L+++K+ LD+EI YR ++E EE L
Sbjct: 325 QQKLRLKDEELLKMRSQMLSQLEDYESLLDVKVALDMEINAYRKMLEVEEQRL 377
>gi|260789258|ref|XP_002589664.1| hypothetical protein BRAFLDRAFT_61222 [Branchiostoma floridae]
gi|229274845|gb|EEN45675.1| hypothetical protein BRAFLDRAFT_61222 [Branchiostoma floridae]
Length = 449
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 11/115 (9%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEY-------- 231
D+L++ +L + + KY ++ L++ + RN++LE Q++
Sbjct: 319 FDDLQRSSGKNTNDLADARAELSKYQNQIARLQSEIESMKNRNRQLEGQLKNVEESGATK 378
Query: 232 ---EQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES 283
+Q++ +EAE++RL+ E+ +Q+K+Y EL +K+ LDVEIA YR L+E EES
Sbjct: 379 LAEKQAEIEALEAELQRLRGEINKQMKEYAELQNVKMALDVEIAAYRKLLEGEES 433
>gi|410919415|ref|XP_003973180.1| PREDICTED: plasticin-like [Takifugu rubripes]
Length = 468
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 8/111 (7%)
Query: 181 DNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKF 236
D+LR+ + E E++ + + E++ L+ N L + +++EDQ E Q
Sbjct: 300 DSLRQAKQ----EANESRRQIQSLNCEIDALKNTNEALLRQMRDMEDQFANEIGSYQDNV 355
Query: 237 ARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
R+E EI+ L+ EM L++Y++L+ +K+ LD+EIA YR L+E EES +
Sbjct: 356 GRLEDEIRHLKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIAV 406
>gi|47220692|emb|CAG11761.1| unnamed protein product [Tetraodon nigroviridis]
Length = 446
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 64/109 (58%), Gaps = 8/109 (7%)
Query: 181 DNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKF 236
D+LR+ + E E++ + + E++ L+ N L + +++EDQ E Q
Sbjct: 300 DSLRQAKQ----EANESRRQIQSLNCEIDALKNTNEALLRQMRDMEDQFANEIGSYQDNV 355
Query: 237 ARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
R+E EI+ L+ EM L++Y++L+ +K+ LD+EIA YR L+E EES +
Sbjct: 356 GRLEDEIRHLKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRI 404
>gi|481|emb|CAA31370.1| cytokeratin 8 (370 AA) [Bos taurus]
gi|163245|gb|AAA30598.1| type II cytokeratin A (no.8), partial [Bos taurus]
Length = 370
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 41/55 (74%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
Q+K AR+EA ++ + +M QL++Y+ELM +K+ LDVEIA YR L+E EES L +
Sbjct: 249 QAKLARLEAALRNAKQDMARQLREYQELMNVKLALDVEIATYRKLLEGEESRLES 303
>gi|358412387|ref|XP_596314.5| PREDICTED: intermediate filament tail domain-containing protein 1
[Bos taurus]
gi|359065764|ref|XP_002687779.2| PREDICTED: intermediate filament tail domain-containing protein 1
[Bos taurus]
Length = 434
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q SSA G+++I EV+ G FVKL N + E +GN L + V G+ + ++F + +
Sbjct: 186 QSRSSAVGDIKIAEVNVKGLFVKLINSSPDKELEIGNHTLQQNVGGQTISLYRFLPGIIM 245
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E H+ P + + K Q +F +G +TIL +GE
Sbjct: 246 QANSTVTVWTAASE-VKHQSPSDFLWKEQNRFQTGPNCTTILCKPNGE 292
>gi|268577319|ref|XP_002643641.1| C. briggsae CBR-IFA-3 protein [Caenorhabditis briggsae]
Length = 576
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 71 SAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGG 129
SAKG++ I E P+GKFV L N ++E+ LG+W+L RK+ G+ + F F +
Sbjct: 459 SAKGHVAIKETSPEGKFVILENTHRAKEEPLGDWKLKRKIDGKREIVFTFPSDYVLHPFQ 518
Query: 130 TVTVWSFNVEGATHEPPHNIVMK-NQKFGSGDEISTILLNTDGE 172
+V + F PP +V + + FG G + TIL N GE
Sbjct: 519 SVKI--FARGNGIANPPDVLVFEGDDTFGVGANVQTILYNNKGE 560
>gi|426226945|ref|XP_004007593.1| PREDICTED: intermediate filament tail domain-containing protein 1
[Ovis aries]
Length = 367
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q SSA G+++I EV+ G FVKL N + E +GN L + V G+ + ++F + +
Sbjct: 62 QSRSSALGDIKIAEVNVKGLFVKLINSSPDKEMEIGNHTLQQNVDGQTISLYRFLPGIIM 121
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMK-NQKFGSGDEISTILLNTDGE 172
+A TVTVW+ E H+ P + + K + +F +G +TIL +GE
Sbjct: 122 QANSTVTVWTAASE-IKHQSPSDFLWKEHNRFHTGPNCTTILCKPNGE 168
>gi|410906283|ref|XP_003966621.1| PREDICTED: desmin-like [Takifugu rubripes]
Length = 473
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + +++ED+ E S + +R+E EI ++ EM L++Y++
Sbjct: 333 YTCEIDSLKGTNDSLMRQMRDMEDRHGLEASGYQDTISRLETEIANMKDEMARHLREYQD 392
Query: 260 LMEIKINLDVEIAQYRNLMEAEES--SLP 286
L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 393 LLNVKMALDVEIATYRKLLEGEESRIALP 421
>gi|387913864|gb|AFK10541.1| vimentin [Callorhinchus milii]
Length = 406
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 57/91 (62%), Gaps = 8/91 (8%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
+E+N LR N L + +E+E++ E Q +++E +I L+ EM+ L++Y++L+
Sbjct: 272 SEINGLRGTNESLEHQMREMEERFSMEANNYQDNISQLEEDIHNLKDEMSRHLQEYQDLL 331
Query: 262 EIKINLDVEIAQYRNLMEAEES----SLPTY 288
+K+ LD+EIA YR L+E EE+ +P++
Sbjct: 332 NVKMALDIEIATYRKLLEGEETRIAGPIPSF 362
>gi|296487309|tpg|DAA29422.1| TPA: RIKEN cDNA 4933403M22-like [Bos taurus]
Length = 408
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q SSA G+++I EV+ G FVKL N + E +GN L + V G+ + ++F + +
Sbjct: 160 QSRSSAVGDIKIAEVNVKGLFVKLINSSPDKELEIGNHTLQQNVGGQTISLYRFLPGIIM 219
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E H+ P + + K Q +F +G +TIL +GE
Sbjct: 220 QANSTVTVWTAASE-VKHQSPSDFLWKEQNRFQTGPNCTTILCKPNGE 266
>gi|432867542|ref|XP_004071234.1| PREDICTED: glial fibrillary acidic protein-like [Oryzias latipes]
Length = 448
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
+++ LR N L + +E+ED+ E Q +R+E EI+ L+ EM L++Y++L+
Sbjct: 311 CDLDALRGTNESLERQLREMEDRCAMETAGYQDTVSRLEEEIQALKEEMARHLQEYQDLL 370
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 371 NVKLALDIEIATYRKLLEGEESRI 394
>gi|46485130|tpg|DAA04930.1| TPA_exp: keratin Kb40 [Mus musculus]
Length = 800
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 172 ELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEY 231
EL ++ N KE + +L++ R +++ LR N L + E Q E
Sbjct: 304 ELQESAQLQGNSMKEAQVQISQLRQAIHR---LQSQIGSLRKQNDSLQSAIADAEQQGEM 360
Query: 232 E----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
Q+K +EA ++ + +M + L+DY+ELM K++LDVEIA YR L+E+EE + T
Sbjct: 361 AVRDAQAKLDELEAALRTAKQDMAQMLRDYQELMGTKLSLDVEIAMYRRLLESEECRIST 420
>gi|344266043|ref|XP_003405090.1| PREDICTED: LOW QUALITY PROTEIN: keratin, type II cytoskeletal
8-like [Loxodonta africana]
Length = 495
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%)
Query: 229 IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
I+ Q+K A +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 355 IKDAQNKLAELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRL 411
>gi|148232220|ref|NP_001080908.1| vimentin-1/2 [Xenopus laevis]
gi|51258384|gb|AAH80051.1| Vim1 protein [Xenopus laevis]
Length = 459
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 24/115 (20%)
Query: 182 NLRKEQSSLLLELKETKGRSGKYDTEMNELR------AANYRLTERNKELEDQIEYEQSK 235
+ R++ +L E+ KG + Y+ +M E+ AANY Q
Sbjct: 312 DFRRQIQTLTCEIDAMKGSNESYERQMREMEENFAIEAANY----------------QDT 355
Query: 236 FARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
R++ EI+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP +
Sbjct: 356 IQRLQEEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPVH 410
>gi|387019837|gb|AFJ52036.1| Vimentin [Crotalus adamanteus]
Length = 457
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 8/91 (8%)
Query: 206 TEMNELRAANYRLTERNKELED----QIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELM 261
E++ L+ N L + +E+ED ++ Q AR++ EI+ ++ EM L++Y+EL+
Sbjct: 321 CEVDALKGTNESLERQMREMEDAYGAEVASYQDNIARLQEEIQNMKEEMARHLREYQELL 380
Query: 262 EIKINLDVEIAQYRNLMEAEES----SLPTY 288
+K+ LD+EIA YR L+E EES +PT+
Sbjct: 381 NVKMALDIEIATYRKLLEGEESRINVPIPTF 411
>gi|312071044|ref|XP_003138426.1| hypothetical protein LOAG_02841 [Loa loa]
gi|307766408|gb|EFO25642.1| intermediate filament protein ifa-1 [Loa loa]
Length = 573
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 57 ESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKT 115
E+ RTS FQ SAKGN+ I E DG F+ + N ++E+S+G W+L RK+ G+ +
Sbjct: 450 EAASRTS--FQ--RSAKGNVSIQETSADGTFIIIQNTHRAKEESIGEWKLKRKIDGKKEI 505
Query: 116 SFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+ F ++ G +V + + PP +V + FG + TIL + DGE
Sbjct: 506 VYTFPHDFILKPGKSVKIVARG--HGISSPPEQLVFDGEDSFGYSSNVHTILYSRDGE 561
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 10/104 (9%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
+ LR + + L +L + +GR+ + ++ EL NY+L + DQ YE + R
Sbjct: 325 VKRLRTQLADLRGKLSDLEGRNSLLEKQIQEL---NYQLED------DQRSYEAALNDR- 374
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES 283
+A+I++++ E + + + L++ K LD EIA YR ++E EE+
Sbjct: 375 DAQIRKMREECQALMVELQMLLDTKQTLDAEIAIYRKMLEGEEN 418
>gi|138531|sp|P24789.1|VIM1_XENLA RecName: Full=Vimentin-1/2
gi|65207|emb|CAA34741.1| vimentin (Vim1) [Xenopus laevis]
gi|55391520|gb|AAH85223.1| Vim1 protein [Xenopus laevis]
Length = 458
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 24/115 (20%)
Query: 182 NLRKEQSSLLLELKETKGRSGKYDTEMNELR------AANYRLTERNKELEDQIEYEQSK 235
+ R++ +L E+ KG + Y+ +M E+ AANY Q
Sbjct: 311 DFRRQIQTLTCEIDAMKGSNESYERQMREMEENFAIEAANY----------------QDT 354
Query: 236 FARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
R++ EI+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP +
Sbjct: 355 IQRLQEEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPVH 409
>gi|38303787|gb|AAH45052.2| Vim1 protein [Xenopus laevis]
Length = 458
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 24/115 (20%)
Query: 182 NLRKEQSSLLLELKETKGRSGKYDTEMNELR------AANYRLTERNKELEDQIEYEQSK 235
+ R++ +L E+ KG + Y+ +M E+ AANY Q
Sbjct: 311 DFRRQIQTLTCEIDAMKGSNESYERQMREMEENFAIEAANY----------------QDT 354
Query: 236 FARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
R++ EI+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP +
Sbjct: 355 IQRLQEEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPVH 409
>gi|268531338|ref|XP_002630795.1| C. briggsae CBR-IFB-2 protein [Caenorhabditis briggsae]
Length = 524
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 57 ESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYN-KGSEEQSLGNWQLVRKVQGEVKT 115
+ E +T S F+ AKGN+ I E DP GK++ L N GS + + ++++ R + G
Sbjct: 396 QGEVQTRSTFK--RHAKGNVSIIECDPTGKYIILENTSGSIAEDVSHFEIRRVIDGTQAF 453
Query: 116 SFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDG 171
+F I G + ++ N G H PP +IVM++ +G G + T L N+ G
Sbjct: 454 TFHLPSHSVIHPHGHLKIYGRNA-GGIHSPPDSIVMESHPSWGQGQVVETFLYNSHG 509
>gi|440891340|gb|ELR45086.1| Intermediate filament tail domain-containing protein 1, partial
[Bos grunniens mutus]
Length = 357
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q SSA G+++I EV+ G FVKL N + E +GN L + V G+ + ++F + +
Sbjct: 126 QSRSSAVGDIKIAEVNVKGLFVKLINSSPDKELEIGNHTLQQNVGGQTISLYRFLPGIIM 185
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E H+ P + + K Q +F +G +TIL +GE
Sbjct: 186 QANSTVTVWTAASE-VKHQSPSDFLWKEQNRFQTGPNCTTILCKPNGE 232
>gi|66393075|ref|NP_571448.2| glial fibrillary acidic protein [Danio rerio]
gi|61644554|gb|AAH91942.1| Glial fibrillary acidic protein [Danio rerio]
gi|182888788|gb|AAI64211.1| Gfap protein [Danio rerio]
Length = 444
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
++ LR +N L + KE+E++ E Q AR+E EI+ L+ EM L++Y++L+
Sbjct: 306 CDLESLRGSNESLERQLKEMEERFAIETAGYQDTVARLEDEIQMLKEEMARHLQEYQDLL 365
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 366 NVKLALDIEIATYRKLLEGEESRI 389
>gi|125112|sp|P08776.1|K2C8_XENLA RecName: Full=Keratin, type II cytoskeletal 8; AltName:
Full=Cytokeratin-8; Short=CK-8; AltName: Full=Keratin-8;
Short=K8
gi|214556|gb|AAA49891.1| cytokeratin [Xenopus laevis]
gi|225702|prf||1311258A cytokeratin 8
Length = 502
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + +E++ L+A L + E E++ E ++K A +EA +++ +
Sbjct: 314 EISELTRYTTRLQSEIDALKAQRANLEAQIAEAEERGELALKDARNKLAELEAALQKAKQ 373
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+M+ QL+DY+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 374 DMSRQLRDYQELMNVKLALDIEIATYRKLLEGEESRLES 412
>gi|395538950|ref|XP_003771437.1| PREDICTED: intermediate filament tail domain-containing protein 1
[Sarcophilus harrisii]
Length = 268
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAG 128
S+A G+++I EV G FVK+ N + E ++G L + V G V + ++FH +++ A
Sbjct: 35 SNALGDIKIVEVS--GLFVKIINSSPDKELTIGEHILQQNVNGRVVSVYRFHPNIRLPAN 92
Query: 129 GTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+TVW+ H PP + + K Q KF + +TIL +GE
Sbjct: 93 AAITVWA-AASKVKHHPPSDFLWKEQDKFRTSSNCTTILCKPNGE 136
>gi|42476244|ref|NP_694505.2| lamin L3 [Danio rerio]
gi|38197594|gb|AAH61708.1| Lamin L3 [Danio rerio]
gi|40807153|gb|AAH65358.1| Lamin L3 [Danio rerio]
Length = 584
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 62 TSSGFQVT------SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEV-K 114
T SGF SS +G + I EVD DG+++KL N +Q + WQL RK + E
Sbjct: 423 TCSGFSPNYRLSQHSSCRGPVSIEEVDLDGRYIKLKNASDRDQVVSGWQL-RKSEAEAPD 481
Query: 115 TSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
F F + AG +TVW+ ++ +Q +GS ++ LLN E
Sbjct: 482 IVFCFPSPCVMNAGHMLTVWAAAAVDQCGSASDLLLSTHQSWGSFADVRVSLLNIQNE 539
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEA----EIKRLQT 248
EL TK R ++N L+ L R EL+ +E+E+ + + E+ L+
Sbjct: 300 ELAGTKLRLESQTQQINNLQKQVVCLEARVLELQQTLEHERQVSQQKLSQQQQEMAALRL 359
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M EQL++Y L+++K+ LD+EI YR ++E EE L
Sbjct: 360 QMQEQLEEYENLLDVKLMLDMEINAYRKMLEGEEKRL 396
>gi|2764976|emb|CAA68255.1| intermediate filament protein [Lineus sanguineus]
Length = 602
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 71 SAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGT 130
SAKGN+ + E D GKF+ N G +++ L W++ RK++G+ +F + L I
Sbjct: 492 SAKGNISVAECDASGKFIVFENTGKKDEVLEGWKVNRKIEGKSPVTFSVPK-LTIGNQRK 550
Query: 131 VTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
+W V+G ++ + G G I TILLN +GE
Sbjct: 551 AKIW---VQGGKPAGSSDMECDVKSMGVGGNIQTILLNAEGE 589
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
M AEI+ L+ E+ L + + L++ K++L++EIA YR L+E EE+ +
Sbjct: 406 MRAEIESLRAELESVLAELQNLLDAKLSLELEIAAYRKLLEGEETRI 452
>gi|148224383|ref|NP_001080177.1| desmin [Xenopus laevis]
gi|118457|sp|P23239.1|DESM_XENLA RecName: Full=Desmin
gi|64653|emb|CAA34740.1| desmin [Xenopus laevis]
gi|28302285|gb|AAH46651.1| Des-prov protein [Xenopus laevis]
Length = 458
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + ++LE++ E Q R+E EI+ ++
Sbjct: 308 EMMEYRHQIQSYTCEIDALKGTNDSLMRQMRDLEEKFSGEAAGYQDTIGRLEEEIRNMKD 367
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LD+EIA YR L+E EES +LP
Sbjct: 368 EMARHLREYQDLLNVKMALDMEIATYRKLLEGEESRITLP 407
>gi|426226622|ref|XP_004007439.1| PREDICTED: LOW QUALITY PROTEIN: keratin, type II cytoskeletal 8
[Ovis aries]
Length = 524
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
Q+K A +EA ++ + +M QL++Y+ELM +K+ LDVEIA YR L+E EES L
Sbjct: 397 QAKLAELEAALRNAKQDMARQLREYQELMNVKLALDVEIATYRKLLEGEESRL 449
>gi|354473266|ref|XP_003498857.1| PREDICTED: intermediate filament tail domain-containing protein
1-like [Cricetulus griseus]
Length = 701
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQS-LGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS +++I EV+ G FV+L N +++++ +GN L + V G+ + ++F + +
Sbjct: 173 QFTSSFLEDIKIAEVNVKGLFVRLMNSSTDKETEIGNHILQQNVNGQAVSLYRFPPNIIM 232
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
A TVTVW+ E A +PP + V + Q +F S + +TIL GE
Sbjct: 233 HASSTVTVWAAASE-AKPQPPTDFVWEEQIRFRSSPDCTTILCKPHGE 279
>gi|2764986|emb|CAA69027.1| IF protein [Lineus viridis]
Length = 602
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 71 SAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGT 130
SAKGN+ + E D GKF+ N G +++ L ++ RK++G+ +F T I
Sbjct: 492 SAKGNISVAECDASGKFIVFENTGKKDEVLTGMRIQRKIEGKPPVNFNLP-TSNIAGNKK 550
Query: 131 VTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
V +W V+G ++ + G G I TIL+N DGE
Sbjct: 551 VKIW---VQGGKPAGSSDLECDVKSMGIGGNIQTILMNADGE 589
>gi|395541385|ref|XP_003772625.1| PREDICTED: keratin, type II cytoskeletal 8 [Sarcophilus harrisii]
Length = 486
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 43/59 (72%)
Query: 229 IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
I+ Q+K A +E+ ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 353 IKDAQAKLAELESALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 411
>gi|6226787|sp|Q92155.1|VIME_CYPCA RecName: Full=Vimentin
gi|9457229|gb|AAB20706.2| vimentin [Cyprinus carpio]
Length = 455
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
++ L+ N L + +E+ED E Q AR+E +I+ ++ EM L++Y++L+
Sbjct: 319 CDLEALKGTNESLERQLREMEDNFSMEASGYQDTIARLEDDIRNMKDEMARHLREYQDLL 378
Query: 262 EIKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EES + T
Sbjct: 379 NVKMALDIEIATYRKLLEGEESRITT 404
>gi|124212|sp|P23729.1|IF3T_TORCA RecName: Full=Type III intermediate filament
gi|64402|emb|CAA35912.1| unnamed protein product [Torpedo californica]
Length = 458
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 17/214 (7%)
Query: 91 YNKGSEEQSLGNWQLVRKV---QGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPH 147
+ + ++ L L RKV Q E+ K H IE + F VE P
Sbjct: 200 FRQDVDDACLARLDLERKVETLQEEIMFLKKLHEEEIIELQAQIRDSQFKVEMDVVRPDL 259
Query: 148 NIVMKNQKFGSGDEISTILLNTDGELANQE--RIIDNLRKEQSSLLL---ELKETKGRSG 202
+++ + D++++ + EL + I D+ + +L L E E + +
Sbjct: 260 TAALQDVR-SQFDKLASKNIAETEELYKSKLADITDSASRNNDALRLAKQENNEYRRQVQ 318
Query: 203 KYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYR 258
E++ L+ N L + +++ED+ E Q + +E EI L+ EMT L++Y+
Sbjct: 319 SLTCEIDALKGTNESLERQMQDVEDRYNMETTNAQDTISHLEDEISHLKDEMTRHLQEYQ 378
Query: 259 ELMEIKINLDVEIAQYRNLMEAEES----SLPTY 288
EL+ +K+ LDVEIA YR L+E EE+ LP++
Sbjct: 379 ELLTVKMALDVEIATYRKLLEGEENRISMPLPSF 412
>gi|345313146|ref|XP_001513609.2| PREDICTED: intermediate filament tail domain-containing protein
1-like, partial [Ornithorhynchus anatinus]
Length = 127
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 66/118 (55%), Gaps = 12/118 (10%)
Query: 69 TSSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKIEA 127
+SSA G+++I EVDPDG FVKL N ++ E+ +G + L + V G+ ++F ++++A
Sbjct: 1 SSSALGDIKIAEVDPDGVFVKLLNSSADKEEGIGGYILQQNVNGQAIARYRFPPNVRMKA 60
Query: 128 GGTVTVWSFNVEGATHEP----------PHNIVMKNQ-KFGSGDEISTILLNTDGELA 174
TV VW+ + E + E P + + K Q + + + +T+L +G+++
Sbjct: 61 NSTVKVWAASAERSGDEADAGKAPDLDSPMDFLWKGQDRLRTTFDCTTLLCKPNGQVS 118
>gi|440900693|gb|ELR51772.1| Keratin, type II cytoskeletal 8, partial [Bos grunniens mutus]
Length = 487
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
Q+K A +EA ++ + +M QL++Y+ELM +K+ LDVEIA YR L+E EES L
Sbjct: 366 QAKLAELEAALRNAKQDMARQLREYQELMNVKLALDVEIATYRKLLEGEESRL 418
>gi|145580629|ref|NP_997652.4| keratin Kb40 [Mus musculus]
Length = 1068
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 172 ELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEY 231
EL ++ N KE + +L++ R +++ LR N L + E Q E
Sbjct: 304 ELQESAQLQGNSMKEAQVQISQLRQAIHR---LQSQIGSLRKQNDSLQSAIADAEQQGEM 360
Query: 232 E----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
Q+K +EA ++ + +M + L+DY+ELM K++LDVEIA YR L+E+EE + T
Sbjct: 361 AVRDAQAKLDELEAALRTAKQDMAQMLRDYQELMGTKLSLDVEIAMYRRLLESEECRIST 420
>gi|345791847|ref|XP_850191.2| PREDICTED: keratin, type II cytoskeletal 7-like [Canis lupus
familiaris]
Length = 224
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
Q K A +EA ++R + +M QL++Y++LM IK+ LD EIA YR L+E+EES L
Sbjct: 130 QGKLAWLEAALQRAKHDMVRQLREYQDLMIIKLGLDFEIATYRKLLESEESRL 182
>gi|31978943|gb|AAN39562.1| glial fibrillary acidic protein GFAP [Danio rerio]
Length = 435
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
++ LR +N L + +E+E++ E Q AR+E EI+ L+ EM L++Y++L+
Sbjct: 297 CDLESLRGSNESLERQLREMEERFAIETAGYQDTVARLEDEIQMLKEEMARHLQEYQDLL 356
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 357 NVKLALDIEIATYRKLLEGEESRI 380
>gi|228609|prf||1807305A vimentin
Length = 455
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
++ L+ N L + +E+ED E Q AR+E +I+ ++ EM L++Y++L+
Sbjct: 319 CDLEALKGTNESLERQLREMEDNFSMEASGYQDTIARLEDDIRNMKDEMARHLREYQDLL 378
Query: 262 EIKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EES + T
Sbjct: 379 NVKMALDIEIATYRKLLEGEESRITT 404
>gi|296487900|tpg|DAA30013.1| TPA: keratin, type II cytoskeletal 8 [Bos taurus]
Length = 468
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
Q+K A +EA ++ + +M QL++Y+ELM +K+ LDVEIA YR L+E EES L
Sbjct: 357 QAKLAELEAALRNAKQDMARQLREYQELMNVKLALDVEIATYRKLLEGEESRL 409
>gi|90110026|sp|P05786.3|K2C8_BOVIN RecName: Full=Keratin, type II cytoskeletal 8; AltName:
Full=Cytokeratin-8; Short=CK-8; AltName:
Full=Cytokeratin-A; AltName: Full=Keratin-8; Short=K8;
AltName: Full=Type-II keratin Kb8
Length = 478
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
Q+K A +EA ++ + +M QL++Y+ELM +K+ LDVEIA YR L+E EES L
Sbjct: 357 QAKLAELEAALRNAKQDMARQLREYQELMNVKLALDVEIATYRKLLEGEESRL 409
>gi|402868175|ref|XP_003898188.1| PREDICTED: keratin, type II cytoskeletal 8-like [Papio anubis]
Length = 273
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E I+ +KF+ +EA ++R + +M QL++YRELM +K+ LD+EI YR L+E EE L
Sbjct: 133 ELAIKDANAKFSELEAALQRAKQDMARQLREYRELMNVKLALDIEITTYRKLLEGEERRL 192
>gi|75812916|ref|NP_001028782.1| keratin, type II cytoskeletal 8 [Bos taurus]
gi|74354903|gb|AAI03340.1| Keratin 8 [Bos taurus]
Length = 478
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
Q+K A +EA ++ + +M QL++Y+ELM +K+ LDVEIA YR L+E EES L
Sbjct: 357 QAKLAELEAALRNAKQDMARQLREYQELMNVKLALDVEIATYRKLLEGEESRL 409
>gi|32452111|emb|CAD38129.1| vimentin [Acipenser baerii]
Length = 455
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRELM 261
E++ L+ N L + E+E+ E S + AR+E +I+ ++ EM+ L++Y++L+
Sbjct: 318 CEVDALKGTNESLERQMHEMEENFALESSNYQDSIARLEDDIRNMKDEMSRHLREYQDLL 377
Query: 262 EIKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EES + T
Sbjct: 378 NVKMALDIEIATYRKLLEGEESRITT 403
>gi|46329793|gb|AAH68410.1| Gfap protein, partial [Danio rerio]
Length = 443
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
++ LR +N L + +E+E++ E Q AR+E EI+ L+ EM L++Y++L+
Sbjct: 305 CDLESLRGSNESLERQLREMEERFAIETAGYQDTVARLEDEIQMLKEEMARHLQEYQDLL 364
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 365 NVKLALDIEIATYRKLLEGEESRI 388
>gi|37722304|gb|AAN87836.1| glial fibrillary acidic protein [Danio rerio]
gi|37722306|gb|AAN87837.1| glial fibrillary acidic protein [Danio rerio]
Length = 444
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
++ LR +N L + +E+E++ E Q AR+E EI+ L+ EM L++Y++L+
Sbjct: 306 CDLESLRGSNESLERQLREMEERFAIETAGYQDTVARLEDEIQMLKEEMARHLQEYQDLL 365
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 366 NVKLALDIEIATYRKLLEGEESRI 389
>gi|150383441|sp|Q58EE9.2|GFAP_DANRE RecName: Full=Glial fibrillary acidic protein; Short=GFAP
Length = 444
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
++ LR +N L + +E+E++ E Q AR+E EI+ L+ EM L++Y++L+
Sbjct: 306 CDLESLRGSNESLERQLREMEERFAIETAGYQDTVARLEDEIQMLKEEMARHLQEYQDLL 365
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 366 NVKLALDIEIATYRKLLEGEESRI 389
>gi|326921676|ref|XP_003207082.1| PREDICTED: vimentin-like [Meleagris gallopavo]
Length = 480
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 55/91 (60%), Gaps = 8/91 (8%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
E++ L+ +N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 342 CEVDALKGSNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLL 401
Query: 262 EIKINLDVEIAQYRNLMEAEES----SLPTY 288
+K+ LD+EIA YR L+E EES +PT+
Sbjct: 402 NVKMALDIEIATYRKLLEGEESRINMPIPTF 432
>gi|148235126|ref|NP_001080525.1| keratin, type II cytoskeletal 8 [Xenopus laevis]
gi|28278602|gb|AAH44116.1| Krt8 protein [Xenopus laevis]
Length = 507
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + +E++ L+A L + E E++ E ++K A +EA +++ +
Sbjct: 314 EISELTRYTTRLQSEIDALKAQRANLEAQIAEAEERGELALKDARNKLAELEAALQKAKQ 373
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+MT QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 374 DMTRQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 412
>gi|344266678|ref|XP_003405407.1| PREDICTED: intermediate filament tail domain-containing protein
1-like [Loxodonta africana]
Length = 574
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAG 128
SSA G+++I +V+ +G FV+L N + E +G+ L + + G+ S++F + ++A
Sbjct: 332 SSALGHIKIADVNVNGLFVRLINSSHDKELEIGDHILQQNLNGQTVASYRFLPKIIMQAN 391
Query: 129 GTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
TVTVW+ E A +PP + + K Q KF + +TIL +GE
Sbjct: 392 STVTVWAAASE-AKDQPPSDFLWKEQNKFRTSPNCTTILCKPNGE 435
>gi|511654|gb|AAA37548.1| keratin type II [Mus musculus]
Length = 487
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%)
Query: 229 IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
I+ Q+K A +EA ++R + +M QL++Y+ELM +K+ LD+EI YR L+E EES L +
Sbjct: 349 IKDAQTKLAELEAALQRAKQDMARQLREYQELMNVKLALDIEITTYRKLLEGEESRLES 407
>gi|301612553|ref|XP_002935776.1| PREDICTED: keratin, type II cytoskeletal-like [Xenopus (Silurana)
tropicalis]
Length = 570
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 40/53 (75%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
QSK A +EA +++++ +M QL++Y+ELM +K+ LDVEIA YR L+E EE L
Sbjct: 423 QSKLAELEAALQKVKQDMARQLREYQELMNVKLALDVEIATYRKLLEGEEFRL 475
>gi|124504410|gb|AAI28804.1| Gfap protein [Danio rerio]
Length = 443
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
++ LR +N L + +E+E++ E Q AR+E EI+ L+ EM L++Y++L+
Sbjct: 305 CDLESLRGSNESLERQLREMEERFAIETAAYQDTVARLEDEIQMLKEEMARHLQEYQDLL 364
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 365 NVKLALDIEIATYRKLLEGEESRI 388
>gi|1353209|sp|P48672.1|VIM2_CARAU RecName: Full=Vimentin A2
gi|388284|gb|AAA21756.1| vimentin A2, partial [Carassius auratus]
Length = 243
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
E++ L+ N L + +E+E+ E Q AR+E +I+ ++ EM + L++Y++L+
Sbjct: 105 CEVDALKGTNESLERQMREIEENFAIESSSSQDNIARLEEDIRNMKDEMAKHLREYQDLL 164
Query: 262 EIKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EES + T
Sbjct: 165 NVKMALDIEIATYRKLLEGEESRITT 190
>gi|306850290|gb|ADN06664.1| vimentin [Petromyzon marinus]
Length = 401
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
+++ L+ AN L + +E+E++ E Q R+E +I L+ EM L+DY+EL+
Sbjct: 314 CDIDSLKGANESLERQMREMEERFSVESANYQDTITRLEDDIGNLKDEMARHLRDYQELL 373
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EE+ +
Sbjct: 374 HVKMALDIEIATYRKLLEGEETRV 397
>gi|74096043|ref|NP_001027681.1| intermediate filament protein IF-A [Ciona intestinalis]
gi|12329927|emb|CAC24550.1| intermediate filament protein IF-A [Ciona intestinalis]
Length = 520
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQT 248
EL E + + E++ LR N L ELE++ + S + ++AE L+T
Sbjct: 333 ELSEYRKSVQTLNMEIDSLRGTNDSLQRAMGELEERYNRDTSDYQDTIMNLQAECDDLKT 392
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLP 286
+M + L+ Y+ELM++K+ LD+EIA YR L+E EES L
Sbjct: 393 QMAQHLRQYQELMDVKMALDIEIATYRKLLEGEESRLA 430
>gi|63101330|gb|AAH95599.1| Prph protein [Danio rerio]
Length = 442
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYREL 260
+ ++ L++ N L + +E+E+Q E Q R+E EI+ L+ EM+ L++Y++L
Sbjct: 302 NCDIEALKSTNEALLRQMREMEEQFTLEAGNYQDAVGRLEEEIRHLKEEMSRHLREYQDL 361
Query: 261 MEIKINLDVEIAQYRNLMEAEESSL 285
+ +K+ LD+EIA YR L+E EES +
Sbjct: 362 LNVKMALDIEIATYRKLLEGEESRI 386
>gi|148221985|ref|NP_001080907.1| vimentin-4 [Xenopus laevis]
gi|32450567|gb|AAH54161.1| Vim4 protein [Xenopus laevis]
Length = 463
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 24/116 (20%)
Query: 181 DNLRKEQSSLLLELKETKGRSGKYDTEMNE------LRAANYRLTERNKELEDQIEYEQS 234
++ R++ +L E+ KG + Y+ +M E L AANY Q
Sbjct: 311 NDYRRQIQTLTCEIDAMKGSNESYERQMREMEENFALEAANY----------------QD 354
Query: 235 KFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
R++ EI+ ++ EM+ L++Y++L+ +K+ LD+EIA YR L+E EES ++P +
Sbjct: 355 TIQRLQEEIQNMKEEMSRHLREYQDLLNVKMALDIEIATYRKLLEGEESRITIPVH 410
>gi|431908403|gb|ELK12000.1| Intermediate filament tail domain-containing protein 1 [Pteropus
alecto]
Length = 248
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAG 128
+ A G+++I EV+ G FVKL N + E +GN L + V G+ + ++F ++ ++A
Sbjct: 5 AHAIGDIKIAEVNAMGLFVKLINSSHDKEVEIGNHILQQNVNGQRISLYQFLPSIIMQAN 64
Query: 129 GTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
TVTVW+ E A H+PP + + K + KF + +TIL +GE
Sbjct: 65 STVTVWAAASE-AKHQPPSDFLWKEENKFRTSPNCTTILCKPNGE 108
>gi|1881764|gb|AAC34932.1| plasticin [Danio rerio]
Length = 442
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 4/79 (5%)
Query: 211 LRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKIN 266
L++ N L + +E+E+Q E Q R+E EI+ L+ EM+ L++Y++L+ +K+
Sbjct: 308 LKSTNEALLRQMREMEEQFTLEAGNYQDAVGRLEEEIRHLKEEMSRHLREYQDLLNVKMA 367
Query: 267 LDVEIAQYRNLMEAEESSL 285
LD+EIA YR L+E EES +
Sbjct: 368 LDIEIATYRKLLEGEESRI 386
>gi|18859241|ref|NP_571129.1| peripherin [Danio rerio]
gi|2511773|gb|AAC34934.1| plasticin [Danio rerio]
Length = 435
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 4/79 (5%)
Query: 211 LRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKIN 266
L++ N L + +E+E+Q E Q R+E EI+ L+ EM+ L++Y++L+ +K+
Sbjct: 308 LKSTNEALLRQMREMEEQFTLEAGNYQDAVGRLEEEIRHLKEEMSRHLREYQDLLNVKMA 367
Query: 267 LDVEIAQYRNLMEAEESSL 285
LD+EIA YR L+E EES +
Sbjct: 368 LDIEIATYRKLLEGEESRI 386
>gi|28277305|gb|AAH45233.1| Vim4 protein [Xenopus laevis]
Length = 463
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 24/116 (20%)
Query: 181 DNLRKEQSSLLLELKETKGRSGKYDTEMNE------LRAANYRLTERNKELEDQIEYEQS 234
++ R++ +L E+ KG + Y+ +M E L AANY Q
Sbjct: 311 NDYRRQIQTLTCEIDAMKGSNESYERQMREMEENFALEAANY----------------QD 354
Query: 235 KFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
R++ EI+ ++ EM+ L++Y++L+ +K+ LD+EIA YR L+E EES ++P +
Sbjct: 355 TIQRLQEEIQNMKEEMSRHLREYQDLLNVKMALDIEIATYRKLLEGEESRITIPVH 410
>gi|138532|sp|P24790.1|VIM4_XENLA RecName: Full=Vimentin-4
gi|65209|emb|CAA34742.1| vimentin (Vim4) [Xenopus laevis]
Length = 463
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 24/116 (20%)
Query: 181 DNLRKEQSSLLLELKETKGRSGKYDTEMNE------LRAANYRLTERNKELEDQIEYEQS 234
++ R++ +L E+ KG + Y+ +M E L AANY Q
Sbjct: 311 NDYRRQIQTLTCEIDAMKGSNESYERQMREMEENFALEAANY----------------QD 354
Query: 235 KFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
R++ EI+ ++ EM+ L++Y++L+ +K+ LD+EIA YR L+E EES ++P +
Sbjct: 355 TIQRLQEEIQNMKEEMSRHLREYQDLLNVKMALDIEIATYRKLLEGEESRITIPVH 410
>gi|74177777|dbj|BAE38980.1| unnamed protein product [Mus musculus]
gi|74177834|dbj|BAE39006.1| unnamed protein product [Mus musculus]
Length = 490
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 43/59 (72%)
Query: 229 IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
I+ Q+K A +EA ++R + +M QL++Y+ELM++K+ LD+EI YR L+E EES L +
Sbjct: 352 IKDAQTKLAELEAALQRAKQDMARQLREYQELMKVKLALDIEITTYRKLLEGEESRLES 410
>gi|355786113|gb|EHH66296.1| Type II hair keratin Hb4 [Macaca fascicularis]
Length = 600
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 17/120 (14%)
Query: 166 LLNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKEL 225
L NT E+ R+I L+ E ++ TK + K L AA + E ++
Sbjct: 374 LRNTRNEINELTRLIQRLKAE-------IEHTKAQRAK-------LEAA---VAEAERQG 416
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E + + K A +E +++ + +M QL++Y+ELM K+ LD+EIA YR L+E EES L
Sbjct: 417 EATLNDAKCKLADLECALQQAKQDMARQLREYQELMNAKLGLDIEIATYRRLLEGEESRL 476
>gi|148672065|gb|EDL04012.1| mCG17595, isoform CRA_a [Mus musculus]
Length = 286
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%)
Query: 229 IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
I+ Q+K A +EA ++R + +M QL++Y+ELM +K+ LD+EI YR L+E EES L +
Sbjct: 148 IKDAQTKLAELEAALQRAKQDMARQLREYQELMNVKLALDIEITTYRKLLEGEESRLES 206
>gi|57014045|gb|AAW32539.1| lamin A/C transcript variant 1 [Homo sapiens]
Length = 480
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL E + S F + G + + EVD +GK
Sbjct: 400 GRASSHSSQTQGGGSV--TKKRKLESTE-------SRSSFSQHARTSGRVAVEEVDEEGK 450
Query: 87 FVKLYNKGSEEQSLGNWQLVRK 108
FV+L NK +E+QS+GNWQ+ R+
Sbjct: 451 FVRLRNKSNEDQSMGNWQIKRQ 472
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>gi|403296705|ref|XP_003939238.1| PREDICTED: keratin, type II cuticular Hb4 [Saimiri boliviensis
boliviensis]
Length = 597
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 8/110 (7%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEY----EQSK 235
DNLR ++ E+ E + E+ +A +L E E Q E + K
Sbjct: 368 CDNLRHTRN----EINELTRLIQRLKAEIEHAKAQRAKLETAVAEAEQQGEATLNDAKCK 423
Query: 236 FARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
A +E +++ + +M QL++Y+ELM +K+ LD+EIA YR+L+E EES L
Sbjct: 424 LADLECALQQAKQDMARQLREYQELMNVKLALDIEIATYRHLLEGEESRL 473
>gi|301772368|ref|XP_002921621.1| PREDICTED: keratin, type II cytoskeletal 7-like [Ailuropoda
melanoleuca]
Length = 467
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+K A +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 354 AKLAELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRL 405
>gi|291389225|ref|XP_002711167.1| PREDICTED: keratin 8-like [Oryctolagus cuniculus]
Length = 540
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+K A +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 409 AKLAELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRL 460
>gi|335287799|ref|XP_003355440.1| PREDICTED: keratin, type II microfibrillar, component 7C-like [Sus
scrofa]
Length = 186
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 40/53 (75%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+SK A +EA ++R + +M QL++Y+ELM +++ LD EIA YR L+E+EES L
Sbjct: 67 KSKLAWLEAALQRAKQDMVRQLREYQELMIVRLGLDFEIATYRKLLESEESRL 119
>gi|402886070|ref|XP_003906464.1| PREDICTED: keratin, type II cuticular Hb4 [Papio anubis]
Length = 600
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 17/120 (14%)
Query: 166 LLNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKEL 225
L NT E+ R+I L+ E ++ TK + K L AA + E ++
Sbjct: 374 LRNTRNEINELTRLIQRLKAE-------IEHTKAQRAK-------LEAA---VAEAERQG 416
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E + + K A +E +++ + +M QL++Y+ELM K+ LD+EIA YR L+E EES L
Sbjct: 417 EATLNDAKCKLADLECALQQAKQDMARQLREYQELMNAKLGLDIEIATYRRLLEGEESRL 476
>gi|109096771|ref|XP_001093676.1| PREDICTED: keratin, type II cuticular Hb4-like [Macaca mulatta]
Length = 600
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 17/120 (14%)
Query: 166 LLNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKEL 225
L NT E+ R+I L+ E ++ TK + K L AA + E ++
Sbjct: 374 LRNTRNEINELTRLIQRLKAE-------IEHTKAQRAK-------LEAA---VAEAERQG 416
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E + + K A +E +++ + +M QL++Y+ELM K+ LD+EIA YR L+E EES L
Sbjct: 417 EATLNDAKCKLADLECALQQAKQDMARQLREYQELMNAKLGLDIEIATYRRLLEGEESRL 476
>gi|55291|emb|CAA35803.1| unnamed protein product [Mus musculus]
Length = 466
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 15/110 (13%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNVSLERQMREMEENFALEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES----SLPTY 288
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES LPT+
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPTF 418
>gi|435737|gb|AAB28219.1| glial fibrillary acidic protein [Cyprinus carpio]
Length = 214
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
++ LR +N L + +E+E++ E Q AR+E EI+ L+ EM L++Y++L+
Sbjct: 76 CDLESLRGSNESLERQLREMEERFTIETVGYQDTVARLEDEIQMLKEEMARHLQEYQDLL 135
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 136 NVKLALDIEIATYRKLLEGEESRI 159
>gi|14017762|dbj|BAB47395.1| larva-specific keratin RLK [Rana catesbeiana]
Length = 549
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 11/105 (10%)
Query: 194 LKETKGRSGKYDTEMNELRA-------ANYRLTERNKELEDQIEY----EQSKFARMEAE 242
L+ TK + + ++ LRA N +L E ED+ E +K A +EA
Sbjct: 351 LRNTKNEISELNRKLQRLRAEIENVKKQNAKLQTAIAEAEDRGELVLKDAHAKLAELEAA 410
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+++ + EM QL++Y+ELM K+ LDVEIA YR L+E EE+ L T
Sbjct: 411 LQKAKQEMARQLREYQELMNTKLALDVEIATYRKLLEGEETRLST 455
>gi|57335406|emb|CAH05051.1| type III desmin [Protopterus aethiopicus]
Length = 453
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 10/113 (8%)
Query: 181 DNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKF 236
D LR+ + ++ E K + Y E+ L+ N L + + E++ E Q
Sbjct: 296 DALRQAKQDMM----EYKHQIQSYTCEIEALKGTNESLLRQIRNTEERFATEAAGYQDTI 351
Query: 237 ARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPT 287
AR+E +I+ L+ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 352 ARLEDDIRMLKDEMARHLREYQDLLNVKMALDMEIATYRKLLEGEESRISLPA 404
>gi|17386168|gb|AAL38630.1|AF447708_1 vimentin [Daboia russellii]
Length = 459
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 26/115 (22%)
Query: 184 RKEQSSLLLELKETKGRSGKYDTEMNELR------AANYRLTERNKELEDQIEYEQSKFA 237
R++ SL E+ KG + + +M E+ AANY Q A
Sbjct: 315 RRQIQSLTCEVDALKGTNESLERQMREMEEAFGVEAANY----------------QDNIA 358
Query: 238 RMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL----PTY 288
R++ EI+ ++ EM L++Y+EL+ +K+ LD+EIA YR L+E EES + PT+
Sbjct: 359 RLQEEIQNMKEEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRINVPVPTF 413
>gi|74219975|dbj|BAE40567.1| unnamed protein product [Mus musculus]
Length = 490
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%)
Query: 229 IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
I+ Q+K A +EA ++R + +M QL++Y+ELM +K+ LD+EI YR L+E EES L
Sbjct: 352 IKDAQTKLAELEAALQRAKQDMARQLREYQELMNVKLALDIEITTYRKLLEGEESRL 408
>gi|147904224|ref|NP_001087033.1| desmin, gene 1 [Xenopus laevis]
gi|50604005|gb|AAH77922.1| Des-prov protein [Xenopus laevis]
Length = 458
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + Y E++ L+ N L + ++ E++ E Q R+E EI+ ++
Sbjct: 308 EMMEYRHQIQSYTCEIDALKGTNDSLLRQMRDQEERFSGEAAGYQDNVGRLEEEIRNMKD 367
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
EM L++Y++L+ +K+ LDVEIA YR L+E EES +LP
Sbjct: 368 EMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRITLP 407
>gi|309215|gb|AAA37551.1| EndoA' cytokeratin (5' end put.); putative [Mus musculus]
Length = 479
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%)
Query: 229 IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
I+ Q+K A +EA ++R + +M QL++Y+ELM +K+ LD+EI YR L+E EES L
Sbjct: 341 IKDAQTKLAELEAALQRAKQDMARQLREYQELMNVKLALDIEITTYRKLLEGEESRL 397
>gi|47575782|ref|NP_001001235.1| peripherin [Xenopus (Silurana) tropicalis]
gi|45708889|gb|AAH67967.1| peripherin [Xenopus (Silurana) tropicalis]
Length = 456
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 63/102 (61%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQT 248
++ E++ + E++ L+ N L + K++E+Q E S + R+E E++ ++
Sbjct: 302 DMNESRRQIQSLTCEIDGLKGTNEALLRQMKDMEEQFGVEASNYQDTIGRLEQEVQHMKE 361
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM+ L++Y++L+ +K+ LD+EIA YR L+E EES ++P +
Sbjct: 362 EMSRHLREYQDLLNVKMALDIEIATYRKLLEGEESRIAVPIH 403
>gi|76779293|gb|AAI06155.1| Keratin 8 [Mus musculus]
Length = 490
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%)
Query: 229 IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
I+ Q+K A +EA ++R + +M QL++Y+ELM +K+ LD+EI YR L+E EES L +
Sbjct: 352 IKDAQTKLAELEAALQRAKQDMARQLREYQELMNVKLALDIEITTYRKLLEGEESRLES 410
>gi|397522084|ref|XP_003831109.1| PREDICTED: keratin, type II cuticular Hb4 [Pan paniscus]
Length = 600
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
+ N+R E + L ++ K + + +L AA + E ++ E + + K A +
Sbjct: 374 LHNIRNEINELTRLIQRLKAETEHAKAQRAKLEAA---VAEAEQQGEATLSDAKCKLADL 430
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E +++ + +M QL++Y+ELM K+ LD+EIA YR L+E EES L
Sbjct: 431 ECALQQAKQDMARQLREYQELMNAKLGLDIEIATYRRLLEGEESRL 476
>gi|260813806|ref|XP_002601607.1| hypothetical protein BRAFLDRAFT_124339 [Branchiostoma floridae]
gi|229286906|gb|EEN57619.1| hypothetical protein BRAFLDRAFT_124339 [Branchiostoma floridae]
Length = 619
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQ----IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELM 261
+E++ ++ N L + +ELE + ++ QS +E E+K+++ EM +Q++DY ELM
Sbjct: 363 SEVDTAKSKNALLEKSARELESRSTGDVDQLQSMVRSLEDELKQIKNEMAKQVQDYNELM 422
Query: 262 EIKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LDVEI YR L+E EE+ + T
Sbjct: 423 NVKLALDVEIQAYRKLLEGEETRMDT 448
>gi|198425282|ref|XP_002119113.1| PREDICTED: hypothetical protein [Ciona intestinalis]
Length = 471
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQT 248
EL E + + E++ LR N L ELE++ + S + ++AE L+T
Sbjct: 336 ELSEYRKSVQTLNMEIDSLRGTNDSLQRAMGELEERYNRDTSDYQDTIMNLQAECDDLKT 395
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M + L+ Y+ELM++K+ LD+EIA YR L+E EES L
Sbjct: 396 QMAQHLRQYQELMDVKMALDIEIATYRKLLEGEESRL 432
>gi|443719574|gb|ELU09669.1| hypothetical protein CAPTEDRAFT_160557 [Capitella teleta]
Length = 148
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 71 SAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGT 130
SAKG + I+E DGK + L N G +E+ LG W + R + G K +F + I G
Sbjct: 35 SAKGPVSISECTADGKCIILENTGRKEEFLGGWSIKRNIDGMDKANFTLDKNFTIRPAGK 94
Query: 131 VTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
V ++S + + P++I +G G I+T L+N G+
Sbjct: 95 VKIFSAG-QLPGNSGPYDIEANVASWGIGANITTSLINPSGD 135
>gi|114145561|ref|NP_112447.2| keratin, type II cytoskeletal 8 [Mus musculus]
gi|148225170|ref|NP_001091278.1| uncharacterized protein LOC100037087 [Xenopus laevis]
gi|90110028|sp|P11679.4|K2C8_MOUSE RecName: Full=Keratin, type II cytoskeletal 8; AltName:
Full=Cytokeratin endo A; AltName: Full=Cytokeratin-8;
Short=CK-8; AltName: Full=Keratin-8; Short=K8; AltName:
Full=Type-II keratin Kb8
gi|220392|dbj|BAA14375.1| cytokeratin endo A [Mus musculus]
gi|309214|gb|AAA37550.1| EndoA cytokeratin (5' end put.); putative [Mus musculus]
gi|26346474|dbj|BAC36888.1| unnamed protein product [Mus musculus]
gi|62740078|gb|AAH94009.1| Keratin 8 [Mus musculus]
gi|74139556|dbj|BAE40915.1| unnamed protein product [Mus musculus]
gi|74146594|dbj|BAE41308.1| unnamed protein product [Mus musculus]
gi|74147347|dbj|BAE27557.1| unnamed protein product [Mus musculus]
gi|74150999|dbj|BAE27630.1| unnamed protein product [Mus musculus]
gi|74184904|dbj|BAE39072.1| unnamed protein product [Mus musculus]
gi|74185081|dbj|BAE39143.1| unnamed protein product [Mus musculus]
gi|74185143|dbj|BAE39172.1| unnamed protein product [Mus musculus]
gi|74189004|dbj|BAE39268.1| unnamed protein product [Mus musculus]
gi|74191093|dbj|BAE39382.1| unnamed protein product [Mus musculus]
gi|74211535|dbj|BAE26499.1| unnamed protein product [Mus musculus]
gi|74214322|dbj|BAE40401.1| unnamed protein product [Mus musculus]
gi|74214357|dbj|BAE40418.1| unnamed protein product [Mus musculus]
gi|74214394|dbj|BAE40434.1| unnamed protein product [Mus musculus]
gi|74216938|dbj|BAE26585.1| unnamed protein product [Mus musculus]
gi|74217097|dbj|BAE26646.1| unnamed protein product [Mus musculus]
gi|74223173|dbj|BAE40723.1| unnamed protein product [Mus musculus]
gi|122936438|gb|AAI30155.1| LOC100037087 protein [Xenopus laevis]
gi|148672066|gb|EDL04013.1| mCG17595, isoform CRA_b [Mus musculus]
gi|148672067|gb|EDL04014.1| mCG17595, isoform CRA_b [Mus musculus]
Length = 490
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%)
Query: 229 IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
I+ Q+K A +EA ++R + +M QL++Y+ELM +K+ LD+EI YR L+E EES L +
Sbjct: 352 IKDAQTKLAELEAALQRAKQDMARQLREYQELMNVKLALDIEITTYRKLLEGEESRLES 410
>gi|449488707|ref|XP_002191975.2| PREDICTED: keratin, type II cytoskeletal 75-like [Taeniopygia
guttata]
Length = 641
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 17/120 (14%)
Query: 166 LLNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKEL 225
L NT GE++ R+I +R E ++ T+ + T + + +E EL
Sbjct: 378 LRNTKGEISELNRLIQRIRSE-------IENTRNQCATLQTAIGD--------SEERGEL 422
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++ ++K +E +++ + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 423 --ALKDAKAKMIDLEDALQKAKADMARQLREYQELMNVKLALDIEIATYRKLLEGEESRL 480
>gi|441626261|ref|XP_003257598.2| PREDICTED: vimentin [Nomascus leucogenys]
Length = 531
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
E++ L+ N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 393 CEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLL 452
Query: 262 EIKINLDVEIAQYRNLMEAEES--SLP 286
+K+ LD+EIA YR L+E EES SLP
Sbjct: 453 NVKMALDIEIATYRKLLEGEESRISLP 479
>gi|74195473|dbj|BAE39554.1| unnamed protein product [Mus musculus]
Length = 490
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%)
Query: 229 IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
I+ Q+K A +EA ++R + +M QL++Y+ELM +K+ LD+EI YR L+E EES L +
Sbjct: 352 IKDAQTKLAELEAALQRAKQDMARQLREYQELMNVKLALDIEITTYRKLLEGEESRLES 410
>gi|227430407|ref|NP_001153087.1| keratin, type II cytoskeletal 8 [Sus scrofa]
Length = 489
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 40/55 (72%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
Q+K A +EA ++ + +M QL++Y+ELM +K+ LDVEIA YR L+E EES L +
Sbjct: 358 QAKLAELEAALRTAKQDMARQLREYQELMNVKLALDVEIATYRKLLEGEESRLES 412
>gi|435739|gb|AAB28220.1| glial fibrillary acidic protein [Cyprinus carpio]
Length = 211
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
++ LR +N L + +E+E++ E Q AR+E EI+ L+ EM L++Y++L+
Sbjct: 74 DLESLRGSNESLERQLREMEERFTIETAGYQDTVARLEDEIQMLKEEMARHLQEYQDLLN 133
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 134 VKLALDIEIATYRKLLEGEESRI 156
>gi|114644580|ref|XP_522389.2| PREDICTED: keratin, type II cuticular Hb4 [Pan troglodytes]
Length = 600
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
+ N+R E + L ++ K + + +L AA + E ++ E + + K A +
Sbjct: 374 LHNIRNEINELTRLIQRLKAETEHAKAQRAKLEAA---VAEAEQQGEATLSDAKCKLADL 430
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E +++ + +M QL++Y+ELM K+ LD+EIA YR L+E EES L
Sbjct: 431 ECALQQAKQDMARQLREYQELMNAKLGLDIEIATYRRLLEGEESRL 476
>gi|291384372|ref|XP_002708774.1| PREDICTED: keratin 8-like [Oryctolagus cuniculus]
Length = 484
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K A +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 353 TKLAELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 406
>gi|297691972|ref|XP_002823355.1| PREDICTED: keratin, type II cytoskeletal 79 [Pongo abelii]
Length = 777
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 193 ELKETKGRSG---KYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTE 249
EL+ T G+ G K + E +L+ A + + + E ++ Q K ++ + + + +
Sbjct: 607 ELQVTAGKHGDNLKSEQECQQLQMA---IADAEQHGELALKDAQKKLGDLDVALHQAKED 663
Query: 250 MTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+T L+DY+ELM +K+ LDVEIA YR L+E+EES +
Sbjct: 664 LTRLLRDYQELMNVKLALDVEIATYRKLLESEESRM 699
>gi|239596173|gb|ACR83583.1| glial fibrillary acidic protein [Danio rerio]
Length = 164
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
++ LR +N L + +E+E++ E Q AR+E EI+ L+ EM L++Y++L+
Sbjct: 47 CDLESLRGSNESLERQLREMEERFAIETAGYQDTVARLEDEIQMLKEEMARHLQEYQDLL 106
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 107 NVKLALDIEIATYRKLLEGEESRI 130
>gi|431917687|gb|ELK16952.1| Vimentin [Pteropus alecto]
Length = 466
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 15/110 (13%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ +N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGSNESLERQMREMEENFAMEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES----SLPTY 288
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES LPT+
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALPLPTF 418
>gi|431921639|gb|ELK18991.1| Keratin, type II cytoskeletal 8 [Pteropus alecto]
Length = 489
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
Q+K A +EA ++ + +M QL++Y+ELM +K+ LDVEIA YR L+E EES L
Sbjct: 354 QAKVAELEAALRNAKQDMARQLREYQELMNVKLALDVEIATYRKLLEGEESRL 406
>gi|726492|gb|AAC46633.1| filarin [Haemopis marmorata]
Length = 597
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 71 SAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGT 130
+A+G + I E PDGKFV L N G + LG + L RKV G+ + F I+
Sbjct: 486 NARGPVSIAECSPDGKFVILENTGKRREELGGFTLRRKVDGKDVPVYTFKADAGIDPHMK 545
Query: 131 VTVWSFNVEGA--THEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
+ +W V+GA ++ +I + +G+G I+T L NT G+
Sbjct: 546 IKLW---VKGAKPSNATASDIEVDILDWGTGQNITTQLFNTSGQ 586
>gi|410964505|ref|XP_003988794.1| PREDICTED: keratin, type II cytoskeletal 8 [Felis catus]
Length = 489
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K A +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 357 AKVAELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 410
>gi|291389195|ref|XP_002711161.1| PREDICTED: keratin, hair, basic, 4-like [Oryctolagus cuniculus]
Length = 544
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 14/118 (11%)
Query: 174 ANQERIIDNLRKEQSSL--LLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEY 231
A Q R DNLR ++ + L LK+ + E+ +A RL E E Q E
Sbjct: 349 AGQHR--DNLRVTRNEINDLSRLKQ------RLKAEVEHTKAQRARLEAAVAEAEQQGEA 400
Query: 232 EQS----KFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
S K A +EA ++R + ++ QL++Y ELM K+ LD+EIA YR L+E EES +
Sbjct: 401 ALSDAGCKLAELEAALQRAKQDLARQLREYHELMNAKLGLDLEIATYRRLLEGEESRI 458
>gi|118404108|ref|NP_001072377.1| keratin 5, gene 2 [Xenopus (Silurana) tropicalis]
gi|113197644|gb|AAI21490.1| keratin 5, gene 2 [Xenopus (Silurana) tropicalis]
Length = 565
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 17/120 (14%)
Query: 166 LLNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKEL 225
L +T E++ R+I+ LR E S+ + +L+AA +TE +
Sbjct: 361 LRSTKTEISELNRMINRLRSEIDSV--------------KKQCAKLQAA---ITEAEERG 403
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E ++ + K A +E +++ + EM QL++Y+ELM +K++LDVEIA YR L+E EE L
Sbjct: 404 ELALKDAKKKLADLEEALQKCKQEMARQLREYQELMNVKLSLDVEIATYRKLLEGEECRL 463
>gi|32452103|emb|CAD38125.1| keratin type IIs [Acipenser baerii]
Length = 459
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 17/123 (13%)
Query: 166 LLNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKEL 225
L NT G++A +R+I L E SS+ KG+ + ++ E E EL
Sbjct: 303 LRNTKGDIAELKRMIQRLESEISSI-------KGQRATLEAQIAE--------AEERGEL 347
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++ +++ A +EA +++ + +M Q+++Y+ELM +K+ LD+EIA YR L+E EE +
Sbjct: 348 --AVKDAKARIADLEAALQKAKQDMARQVREYQELMNVKLALDIEIATYRKLLEGEEDRI 405
Query: 286 PTY 288
+
Sbjct: 406 SNH 408
>gi|202368|gb|AAA40555.1| vimentin protein [Mus musculus]
Length = 466
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 15/110 (13%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFALEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES----SLPTY 288
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES LPT+
Sbjct: 369 IQNMKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPTF 418
>gi|301612557|ref|XP_002935788.1| PREDICTED: keratin, type II cytoskeletal [Xenopus (Silurana)
tropicalis]
Length = 565
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 65/116 (56%), Gaps = 24/116 (20%)
Query: 193 ELKETKGRSGK----YDTEMNELRAANYRL--------TERNKELEDQI-EYEQ------ 233
EL+ T GR G TE++EL A RL +R K LE QI E E+
Sbjct: 375 ELQATAGRHGDDLRTTKTEISELNRAMQRLQAEIESVKAQRAK-LEAQIAEAEERGELAL 433
Query: 234 ----SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+K A +EA +++ + +M QL++Y+ELM +K+ LD+EIA YR L+E EE+ +
Sbjct: 434 KDARTKLAELEAALQKAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEETRI 489
>gi|301775757|ref|XP_002923293.1| PREDICTED: keratin, type II cytoskeletal 8-like [Ailuropoda
melanoleuca]
gi|281341816|gb|EFB17400.1| hypothetical protein PANDA_012426 [Ailuropoda melanoleuca]
Length = 491
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K A +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 359 AKVAELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 412
>gi|359323093|ref|XP_543639.4| PREDICTED: keratin, type II cytoskeletal 8 [Canis lupus familiaris]
Length = 491
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K A +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 359 AKVAELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 412
>gi|395835419|ref|XP_003790677.1| PREDICTED: keratin, type II cytoskeletal 8 [Otolemur garnettii]
Length = 550
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 41/52 (78%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+K A++EA +++ + +M +QL++Y++LM +K+ LDVEIA YR L+E EES L
Sbjct: 357 AKLAQLEAALRQAKQDMAQQLREYQDLMNVKLALDVEIATYRKLLEGEESRL 408
>gi|400800|sp|P31393.1|PLST_CARAU RecName: Full=Plasticin
gi|213004|gb|AAA49187.1| plasticin [Carassius auratus]
Length = 453
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYREL 260
+ +++ L+ N L + +E+E+Q E Q +R+E EI+ L+ EM+ L++Y++L
Sbjct: 306 NCDIDSLKRTNEALLRQMREMEEQFAAEARNYQDTVSRLEDEIRNLKEEMSRHLREYQDL 365
Query: 261 MEIKINLDVEIAQYRNLMEAEESSL 285
+ +K+ LD+EIA YR L+E EE+ +
Sbjct: 366 LNVKMALDIEIATYRKLLEGEENRI 390
>gi|55408|emb|CAA39807.1| vimentin [Mus musculus]
Length = 466
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 15/110 (13%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFALEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES----SLPTY 288
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES LPT+
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPTF 418
>gi|432112593|gb|ELK35309.1| Keratin, type II cytoskeletal 8 [Myotis davidii]
Length = 486
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%)
Query: 229 IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
I+ QSK A +EA ++ + +M QL++Y+ELM +K+ LDVEIA YR L+E EE+ L +
Sbjct: 351 IKDAQSKVAELEAALRNAKQDMARQLREYQELMNVKLALDVEIATYRKLLEGEENRLES 409
>gi|395136658|gb|AFN52412.1| cytokeratn 8 protein [Bubalus bubalis]
Length = 471
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
Q+K A + A ++ + +M QL++Y+ELM +K+ LDVEIA YR L+E EES L
Sbjct: 344 QAKLAELGAALRNAKQDMARQLREYQELMNVKLALDVEIATYRKLLEGEESRL 396
>gi|31982755|ref|NP_035831.2| vimentin [Mus musculus]
gi|138536|sp|P20152.3|VIME_MOUSE RecName: Full=Vimentin
gi|202370|gb|AAA40556.1| vimentin [Mus musculus]
gi|58476928|gb|AAH89335.1| Vimentin [Mus musculus]
gi|74215113|dbj|BAE41790.1| unnamed protein product [Mus musculus]
gi|74227480|dbj|BAE21803.1| unnamed protein product [Mus musculus]
gi|117616736|gb|ABK42386.1| Vimentin [synthetic construct]
gi|148676107|gb|EDL08054.1| vimentin, isoform CRA_b [Mus musculus]
Length = 466
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 15/110 (13%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFALEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES----SLPTY 288
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES LPT+
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPTF 418
>gi|50582982|ref|NP_001002797.1| keratin 8 [Xenopus (Silurana) tropicalis]
gi|45767482|gb|AAH67939.1| keratin 8 [Xenopus (Silurana) tropicalis]
Length = 508
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ E + + +E++ L+A L + E E++ E ++K A +EA +K +
Sbjct: 318 EISELTRYTTRLQSEIDALKAQRSNLEAQIAEAEERGELALKDARTKLAELEAALKNAKQ 377
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 378 DMARQLREYQELMNVKLALDIEIATYRKLLEGEESRL 414
>gi|74199770|dbj|BAE20723.1| unnamed protein product [Mus musculus]
Length = 466
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 15/110 (13%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFALEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES----SLPTY 288
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES LPT+
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPTF 418
>gi|296211736|ref|XP_002752503.1| PREDICTED: keratin, type II cuticular Hb4 [Callithrix jacchus]
Length = 371
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 8/110 (7%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQ----IEYEQSK 235
DNLR ++ E+ E + E+ +A +L E E Q + + K
Sbjct: 142 CDNLRNTRN----EINELTRLIQRLKAEIEHAKAQRAKLEAAVAEAEQQGEGTLNDAKCK 197
Query: 236 FARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
A +E +++ + +M QL++Y+ELM +K+ LD+EIA YR+L+E EES L
Sbjct: 198 LADLECALQQAKQDMARQLREYQELMNVKLALDIEIATYRHLLEGEESRL 247
>gi|57335404|emb|CAH05050.1| type III vimentin [Protopterus aethiopicus]
Length = 464
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 62/106 (58%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++TK S +Y + E++ L+ N L + +E+E+ E Q + +E E
Sbjct: 303 LRQTKQESNEYRRQLQSLNCEIDALKGTNESLERQMREMEENFSIEAANYQDTISNLEEE 362
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EE+ S+P
Sbjct: 363 IRNMKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEETRISMP 408
>gi|74225487|dbj|BAE31653.1| unnamed protein product [Mus musculus]
Length = 466
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 15/110 (13%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFALEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES----SLPTY 288
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES LPT+
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPTF 418
>gi|32452105|emb|CAD38126.1| keratin type IIE [Acipenser baerii]
Length = 487
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 17/122 (13%)
Query: 166 LLNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKEL 225
L NT E+A R+I S L E++ KG+ G + ++ E E EL
Sbjct: 288 LRNTKSEIAELNRMI-------SRLTSEIESVKGQRGNLEAQIAE--------AEERGEL 332
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++ +++ A +EA +++ + +M Q+++Y+ELM +K+ LD+EIA YR L+E EES +
Sbjct: 333 --AVKDAKARIADLEAALQKAKQDMARQVREYQELMNVKLALDIEIATYRKLLEGEESRI 390
Query: 286 PT 287
+
Sbjct: 391 SS 392
>gi|397481762|ref|XP_003812106.1| PREDICTED: neurofilament heavy polypeptide [Pan paniscus]
Length = 881
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 241 VNTDAMRSAQEEITEYRRQLQART---------------TELEALKSTKDSLERQRSELE 285
Query: 227 DQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ + + Q +++AE++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 286 DRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 345
>gi|344265478|ref|XP_003404811.1| PREDICTED: lamin-B1-like [Loxodonta africana]
Length = 450
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVT 132
GN+ I E+D DGKF++L N ++Q +G W+++RK+ G+ ++K+ ++AG TVT
Sbjct: 344 GNICIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI-GDTSVTYKYTSRYVLKAGQTVT 401
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 196 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKERDNSRRMLSDKEREMAEIRD 255
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 256 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 292
>gi|47217816|emb|CAG07230.1| unnamed protein product [Tetraodon nigroviridis]
Length = 324
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
++ LR AN L + +++ED+ E Q +E +I+ L+ EM L++Y++L+
Sbjct: 140 CDLEALRGANESLERQLRDMEDRFSTETAAYQDTVGHLEEDIRALKEEMARHLQEYQDLL 199
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 200 NVKLALDIEIATYRKLLEGEESRI 223
>gi|169641908|gb|AAI60580.1| krt5.7 protein [Xenopus (Silurana) tropicalis]
Length = 537
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 65/116 (56%), Gaps = 24/116 (20%)
Query: 193 ELKETKGRSGK----YDTEMNELRAANYRL--------TERNKELEDQI-EYEQ------ 233
EL+ T GR G TE++EL A RL +R K LE QI E E+
Sbjct: 347 ELQATAGRHGDDLRTTKTEISELNRAMQRLQAEIESVKAQRAK-LEAQIAEAEERGELAL 405
Query: 234 ----SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+K A +EA +++ + +M QL++Y+ELM +K+ LD+EIA YR L+E EE+ +
Sbjct: 406 KDARTKLAELEAALQKAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEETRI 461
>gi|150421558|sp|P48677.2|GFAP_CARAU RecName: Full=Glial fibrillary acidic protein; Short=GFAP
Length = 365
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
++ LR +N L + +E+E++ E Q AR+E EI+ L+ EM L++Y++L+
Sbjct: 227 CDLESLRGSNESLERQLREMEERFAIETAGYQDTVARLEDEIQMLKEEMARHLQEYQDLL 286
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 287 NVKLALDIEIATYRKLLEGEESRI 310
>gi|119580210|gb|EAW59806.1| neurofilament, heavy polypeptide 200kDa, isoform CRA_c [Homo
sapiens]
Length = 587
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 19/123 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 306 VNTDAMRSAQEEITEYRRQLQART---------------TELEALKSTKDSLERQRSELE 350
Query: 227 DQ----IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ I Q +++AE++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 351 DRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 410
Query: 283 SSL 285
+
Sbjct: 411 CRI 413
>gi|213510980|ref|NP_001133947.1| Vimentin [Salmo salar]
gi|209155924|gb|ACI34194.1| Vimentin [Salmo salar]
Length = 462
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRELM 261
E++ L+ N + + +ELE+ E + F +R+E +I+ ++ EM L++Y++L+
Sbjct: 325 CEVDSLKGTNESMERQMRELEESFGCEANNFQDTISRLEDDIRNMKDEMARHLREYQDLL 384
Query: 262 EIKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EES + T
Sbjct: 385 NVKMALDIEIATYRKLLEGEESRITT 410
>gi|185133215|ref|NP_001118201.1| vimentin [Oncorhynchus mykiss]
gi|1353213|sp|P48674.1|VIME_ONCMY RecName: Full=Vimentin
gi|940868|emb|CAA90601.1| vimentin [Oncorhynchus mykiss]
gi|1589589|prf||2211359A vimentin
Length = 461
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRELM 261
E++ L+ N + + +ELE+ E + F +R+E +I+ ++ EM L++Y++L+
Sbjct: 324 CEVDSLKGTNESMERQMRELEESFGCEANNFQDTISRLEDDIRNMKDEMARHLREYQDLL 383
Query: 262 EIKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EES + T
Sbjct: 384 NVKMALDIEIATYRKLLEGEESRITT 409
>gi|388623|gb|AAA49166.1| putative [Carassius auratus]
Length = 359
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
++ LR +N L + +E+E++ E Q AR+E EI+ L+ EM L++Y++L+
Sbjct: 221 CDLESLRGSNESLERQLREMEERFAIETAGYQDTVARLEDEIQMLKEEMARHLQEYQDLL 280
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 281 NVKLALDIEIATYRKLLEGEESRI 304
>gi|111185722|gb|AAI19601.1| Krt78 protein [Mus musculus]
Length = 513
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 203 KYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYR 258
+ +++ LR N L + E Q E Q+K +EA ++ + +M + L+DY+
Sbjct: 332 RLQSQIGSLRKQNDSLQSAIADAEQQGEMAVRDAQAKLDELEAALRTAKQDMAQMLRDYQ 391
Query: 259 ELMEIKINLDVEIAQYRNLMEAEESSLPT 287
ELM K++LDVEIA YR L+E+EE + T
Sbjct: 392 ELMGTKLSLDVEIAMYRRLLESEECRIST 420
>gi|426394037|ref|XP_004063309.1| PREDICTED: neurofilament heavy polypeptide [Gorilla gorilla
gorilla]
Length = 1181
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 462 VNTDAMRSAQEEITEYRRQLQA---------------RTTELEALKSTKDSLERQRSELE 506
Query: 227 DQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ + + Q +++AE++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 507 DRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 566
>gi|348508990|ref|XP_003442035.1| PREDICTED: glial fibrillary acidic protein [Oreochromis niloticus]
Length = 451
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
++ LR N L + +E+E++ E Q +R+E EI+ L+ EM L++Y++L+
Sbjct: 314 CDLEALRGTNESLERQLREMEERCAMETAGYQDTVSRLEEEIQALKEEMARHLQEYQDLL 373
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 374 NVKLALDIEIATYRKLLEGEESRI 397
>gi|426226638|ref|XP_004007446.1| PREDICTED: keratin, type II cytoskeletal 80 [Ovis aries]
Length = 527
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E K EDQ E ++K A++E +++ +
Sbjct: 373 EIADLNVRIQKLRSQILSIKSHCLKLEENIKVAEDQGELAFQDAKAKLAQLEDALQQAKK 432
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M QL++Y+ELM K+ LD+EIA YR LME EES +
Sbjct: 433 DMARQLREYQELMNTKLALDIEIATYRKLMEGEESRM 469
>gi|90075678|dbj|BAE87519.1| unnamed protein product [Macaca fascicularis]
Length = 144
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 10/93 (10%)
Query: 27 GAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGK 86
G SS + T GSV +KKRKL ESE R+S F + G + + EVD +GK
Sbjct: 56 GRASSHSSQTQGGGSV--TKKRKL------ESESRSS--FSQHARTIGRVAVEEVDEEGK 105
Query: 87 FVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKF 119
FV+L NK +E+QS+GNWQ+ R+ + +++F
Sbjct: 106 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRF 138
>gi|2078001|emb|CAA69019.1| vimentin [Mus musculus]
Length = 446
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 15/110 (13%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 289 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFALEAANYQDTIGRLQDE 348
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES----SLPTY 288
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES LPT+
Sbjct: 349 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPTF 398
>gi|74197965|dbj|BAE35166.1| unnamed protein product [Mus musculus]
Length = 466
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 15/110 (13%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFALEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES----SLPTY 288
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES LPT+
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPTF 418
>gi|32484324|gb|AAH54327.1| Vim1 protein, partial [Xenopus laevis]
Length = 272
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 24/115 (20%)
Query: 182 NLRKEQSSLLLELKETKGRSGKYDTEMNELR------AANYRLTERNKELEDQIEYEQSK 235
+ R++ +L E+ KG + Y+ +M E+ AANY Q
Sbjct: 125 DFRRQIQTLTCEIDAMKGSNESYERQMREMEENFAIEAANY----------------QDT 168
Query: 236 FARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
R++ I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP +
Sbjct: 169 IQRLQEVIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPVH 223
>gi|119617060|gb|EAW96654.1| keratin 8, isoform CRA_d [Homo sapiens]
Length = 561
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 429 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRL 480
>gi|444731079|gb|ELW71444.1| Keratin, type II cytoskeletal 8 [Tupaia chinensis]
Length = 519
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 40/52 (76%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+K A++EA +++ + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 416 AKLAQLEAALQQAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRL 467
>gi|403295333|ref|XP_003938602.1| PREDICTED: neurofilament heavy polypeptide [Saimiri boliviensis
boliviensis]
Length = 952
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 338 VNTDAMRSAQEEITEYRRQLQART---------------TELEALKSTKDSLERQRSELE 382
Query: 227 DQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ + + Q +++AE++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 383 DRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 442
>gi|308482127|ref|XP_003103267.1| CRE-MUA-6 protein [Caenorhabditis remanei]
gi|308260057|gb|EFP04010.1| CRE-MUA-6 protein [Caenorhabditis remanei]
Length = 585
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 71 SAKGNMEIT-----EVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLK 124
SAKGN+ I E P+GKFV L N ++E+ LG+W+L RK+ G+ + F F
Sbjct: 463 SAKGNVSIKVSIPEETSPEGKFVILENTHRAKEEPLGDWKLKRKIDGKREIVFTFPSDYV 522
Query: 125 IEAGGTVTVWSFNVEGATHEPPHNIVMK-NQKFGSGDEISTILLNTDGE 172
+ +V + F PP +V + + FG G + TIL N GE
Sbjct: 523 LHPFQSVKI--FARGNGISNPPDVLVFEGDDTFGVGANVQTILYNNKGE 569
>gi|444732236|gb|ELW72542.1| Intermediate filament tail domain-containing protein 1 [Tupaia
chinensis]
Length = 427
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++ I EV F+KL N +E +G+ L + V G+ +S++F + +
Sbjct: 159 QSTSSSLGDIRIAEVK--DMFIKLINSSMDKELEIGDHVLQQNVNGQTISSYRFLPNIIM 216
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H PP + + K Q +F + + + IL +GE
Sbjct: 217 QASSTVTVWAAESE-AKHHPPTDFLWKEQNRFRTTPDCTMILCKPNGE 263
>gi|344266021|ref|XP_003405079.1| PREDICTED: keratin, type II cuticular Hb4 [Loxodonta africana]
Length = 585
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSK 235
DNLR + E+ E + E+ +A +L E E Q E + K
Sbjct: 373 CDNLRNTRD----EINELTRLIQRLKAEIEHAKAQRAKLEAAVAEAEQQGEAALNDAKCK 428
Query: 236 FARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
A +EA +++ + +M QL++Y+ELM K+ LD+EIA YR L+E EES +
Sbjct: 429 LAELEAALQQAKQDMARQLREYQELMNTKLGLDIEIATYRQLLEGEESRI 478
>gi|119617058|gb|EAW96652.1| keratin 8, isoform CRA_b [Homo sapiens]
Length = 482
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 41/57 (71%)
Query: 229 IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
I+ +K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 345 IKDANAKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRL 401
>gi|18859549|ref|NP_571947.1| vimentin [Danio rerio]
gi|4063849|gb|AAC98491.1| vimentin [Danio rerio]
gi|31418733|gb|AAH53115.1| Vimentin [Danio rerio]
Length = 455
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRELM 261
++ L+ N L + +ELED E S + R+E +I+ ++ EM L++Y++L+
Sbjct: 319 CDLEALKGTNESLERQMRELEDSFSMEASGYQDTIGRLEDDIRNMKDEMARHLREYQDLL 378
Query: 262 EIKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EES + +
Sbjct: 379 NVKMALDIEIATYRKLLEGEESRITS 404
>gi|410903045|ref|XP_003965004.1| PREDICTED: glial fibrillary acidic protein-like [Takifugu rubripes]
Length = 452
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYREL 260
+ ++ LR AN L + +++ED+ E Q + +E +I+ L+ EM L++Y++L
Sbjct: 314 NCDLEALRGANESLERQLRDMEDRFSTETAGYQDMVSHLEEDIRALKEEMARHLQEYQDL 373
Query: 261 MEIKINLDVEIAQYRNLMEAEESSL 285
+ +K+ LD+EIA YR L+E EES +
Sbjct: 374 LNVKLALDIEIATYRKLLEGEESRI 398
>gi|74139645|dbj|BAE40959.1| unnamed protein product [Mus musculus]
Length = 466
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 15/110 (13%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E + + R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFALEAANYEDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES----SLPTY 288
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES LPT+
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPTF 418
>gi|297691909|ref|XP_002823305.1| PREDICTED: keratin, type II cuticular Hb4 [Pongo abelii]
Length = 600
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 14/121 (11%)
Query: 169 TDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQ 228
T G+ + R I N E + L+ LK E+ +A +L E+E Q
Sbjct: 366 TAGQHCDNLRNIRNEINELTRLIQRLK----------AEIEHAKAQRAKLEAAVAEVEQQ 415
Query: 229 IEY----EQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESS 284
E + K A +E +++ + +M QL++Y+ELM K+ LD+EIA YR L+E EES
Sbjct: 416 GEATLNDAKCKLADLECALQQAKQDMARQLREYQELMNAKLGLDIEIATYRRLLEGEESR 475
Query: 285 L 285
L
Sbjct: 476 L 476
>gi|440909179|gb|ELR59116.1| Vimentin, partial [Bos grunniens mutus]
Length = 470
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 313 LRQAKQESNEYRRQVQTLTCEVDALKGTNESLERQMREMEENFSVEAANYQDTIGRLQDE 372
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 373 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 418
>gi|327279478|ref|XP_003224483.1| PREDICTED: keratin, type II cytoskeletal 8-like [Anolis
carolinensis]
Length = 483
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 349 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 402
>gi|309267203|ref|XP_003086989.1| PREDICTED: keratin, type II cytoskeletal 78-like, partial [Mus
musculus]
Length = 503
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 203 KYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYR 258
+ +++ LR N L + E Q E Q+K +EA ++ + +M + L+DY+
Sbjct: 332 RLQSQIGSLRKQNDSLQSAIADAEQQGEMAVRDAQAKLDELEAALRTAKQDMAQMLRDYQ 391
Query: 259 ELMEIKINLDVEIAQYRNLMEAEESSLPT 287
ELM K++LDVEIA YR L+E+EE + T
Sbjct: 392 ELMGTKLSLDVEIAMYRRLLESEECRIST 420
>gi|449265561|gb|EMC76739.1| Keratin, type II cytoskeletal 8, partial [Columba livia]
Length = 137
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 235 KFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
K A +EA +++ + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 9 KLAELEAALQQAKADMARQLREYQELMNVKLALDIEIATYRKLLEGEESRL 59
>gi|145226795|gb|ABP48145.1| vimentin [Ovis aries]
Length = 466
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFSVEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|426240829|ref|XP_004014296.1| PREDICTED: vimentin [Ovis aries]
Length = 464
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 307 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFSVEAANYQDTIGRLQDE 366
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 367 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 412
>gi|56789060|gb|AAH87987.1| vim protein [Xenopus (Silurana) tropicalis]
Length = 485
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 24/116 (20%)
Query: 181 DNLRKEQSSLLLELKETKGRSGKYDTEMNELR------AANYRLTERNKELEDQIEYEQS 234
++ R++ +L E+ KG + Y+ +M E+ AANY Q
Sbjct: 337 NDYRRQIQTLTCEIDAMKGSNESYERQMREMEENFAGEAANY----------------QD 380
Query: 235 KFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
R++ EI ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES ++P +
Sbjct: 381 TIQRLQEEIHNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITVPVH 436
>gi|289450|gb|AAA53661.1| vimentin [Bos taurus]
Length = 466
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQTLTCEVDALKGTNESLERQMREMEENFSVEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|134025381|gb|AAI35298.1| vim protein [Xenopus (Silurana) tropicalis]
Length = 484
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 24/116 (20%)
Query: 181 DNLRKEQSSLLLELKETKGRSGKYDTEMNELR------AANYRLTERNKELEDQIEYEQS 234
++ R++ +L E+ KG + Y+ +M E+ AANY Q
Sbjct: 336 NDYRRQIQTLTCEIDAMKGSNESYERQMREMEENFAGEAANY----------------QD 379
Query: 235 KFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
R++ EI ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES ++P +
Sbjct: 380 TIQRLQEEIHNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITVPVH 435
>gi|348529730|ref|XP_003452366.1| PREDICTED: alpha-internexin-like [Oreochromis niloticus]
Length = 450
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 211 LRAANYRLTERNKELED----QIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKIN 266
LR AN L + E+ED ++ Q ++M+ E++ L++EM L++Y++L+ +K+
Sbjct: 325 LRGANESLERQISEMEDTHNAEVTAMQDTISQMDTELRNLKSEMAHHLREYQDLLNVKMA 384
Query: 267 LDVEIAQYRNLMEAEES 283
LD+EIA YR L+E EE+
Sbjct: 385 LDIEIAAYRKLLEGEET 401
>gi|326933937|ref|XP_003213054.1| PREDICTED: glial fibrillary acidic protein-like [Meleagris
gallopavo]
Length = 422
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRELM 261
++ LR +N L + +ELE++ E S + R+E +I+ L+ EM L++Y++L+
Sbjct: 284 CDLEALRGSNESLERQLRELEERYALETSAYQDTVGRLEEDIRSLKEEMARHLQEYQDLL 343
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 344 NVKLALDIEIATYRKLLEGEESRI 367
>gi|110347570|ref|NP_776394.2| vimentin [Bos taurus]
gi|146291097|sp|P48616.3|VIME_BOVIN RecName: Full=Vimentin
gi|109659186|gb|AAI18270.1| Vimentin [Bos taurus]
gi|296481436|tpg|DAA23551.1| TPA: vimentin [Bos taurus]
Length = 466
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQTLTCEVDALKGTNESLERQMREMEENFSVEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|14198278|gb|AAH08200.1| KRT8 protein [Homo sapiens]
Length = 279
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 147 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 200
>gi|426372684|ref|XP_004053248.1| PREDICTED: keratin, type II cytoskeletal 8 [Gorilla gorilla
gorilla]
Length = 483
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 351 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRL 402
>gi|119617057|gb|EAW96651.1| keratin 8, isoform CRA_a [Homo sapiens]
Length = 522
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 390 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRL 441
>gi|417401426|gb|JAA47599.1| Putative nuclear envelope protein lamin intermediate filament
superfamily [Desmodus rotundus]
Length = 466
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|384940054|gb|AFI33632.1| keratin, type II cytoskeletal 8 [Macaca mulatta]
Length = 483
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 351 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 404
>gi|30313|emb|CAA31376.1| cytokeratin 8 (279 AA) [Homo sapiens]
Length = 279
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 147 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 200
>gi|74214018|dbj|BAE29426.1| unnamed protein product [Mus musculus]
Length = 405
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 15/110 (13%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 248 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFALEAANYQDTIGRLQDE 307
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES----SLPTY 288
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES LPT+
Sbjct: 308 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPTF 357
>gi|90075276|dbj|BAE87318.1| unnamed protein product [Macaca fascicularis]
Length = 466
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|13161382|dbj|BAB32977.1| lamin B3 [Carassius auratus]
Length = 589
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 8/107 (7%)
Query: 70 SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEV-KTSFKFHRTLKIEAG 128
SS++GN+ I E+D DG+F+++ N ++QS+G W ++RK + E F+ + AG
Sbjct: 440 SSSRGNLSIDEIDLDGRFIRIKNNSDQDQSVGGW-VLRKSEAEAPDVVFQIPSPCVLSAG 498
Query: 129 GTVTVWSFNVEGATHE--PPHNIVMK-NQKFGSGDEISTILLNTDGE 172
T+TV G+ E P ++V++ ++ +G E+ LLN E
Sbjct: 499 QTLTV---RAAGSVMEQVPRGDLVLRTHETWGPFGEVRVSLLNPQNE 542
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
EL TK R ++N L+ N L R +ELE ++ E Q + ++ E E+ ++
Sbjct: 297 ELAGTKLRLESQSIQINNLQKQNASLEARVQELEQMLDRERQMNQQRLSQKEQEMAEMRQ 356
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M EQL++++ L+++K+ LD+EI YR ++E EE L
Sbjct: 357 QMQEQLEEHQNLLDVKLMLDMEINAYRKMLEGEEKRL 393
>gi|402886120|ref|XP_003906486.1| PREDICTED: keratin, type II cytoskeletal 8 [Papio anubis]
Length = 522
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 390 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRL 441
>gi|348501111|ref|XP_003438114.1| PREDICTED: vimentin-like [Oreochromis niloticus]
Length = 455
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
E++ L+ N L + +E+E+ E Q +R+E +I ++ EM L++Y++L+
Sbjct: 317 CEVDALKGTNESLERQMREMEENFSLETSGYQDTISRLEEDIHNMKDEMARHLREYQDLL 376
Query: 262 EIKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EES + T
Sbjct: 377 NVKMALDIEIATYRKLLEGEESRIST 402
>gi|403278155|ref|XP_003930689.1| PREDICTED: vimentin [Saimiri boliviensis boliviensis]
Length = 466
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|344249339|gb|EGW05443.1| Keratin, type II cytoskeletal 8 [Cricetulus griseus]
Length = 126
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ K A +EA ++R + +M QL++Y+ELM +K+ LD EIA YR L+E EE L
Sbjct: 7 KGKLAWLEAALQRAKQDMARQLREYQELMIVKLGLDFEIATYRRLLEGEEQRL 59
>gi|335296459|ref|XP_003130769.2| PREDICTED: vimentin-like [Sus scrofa]
gi|408360214|sp|P02543.2|VIME_PIG RecName: Full=Vimentin
Length = 466
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|324962843|gb|ADY62499.1| vimentin [Bombina maxima]
Length = 485
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 62/116 (53%), Gaps = 24/116 (20%)
Query: 181 DNLRKEQSSLLLELKETKGRSGKYDTEMNELR------AANYRLTERNKELEDQIEYEQS 234
++ R++ +L E+ KG + ++ +M E+ AANY Q
Sbjct: 317 NDYRRQIQALTCEVDAMKGSNESFERQMREIEENFAAEAANY----------------QD 360
Query: 235 KFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
R++ EI ++ EM+ L++Y++L+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 361 TINRLQDEIHNMKDEMSRHLREYQDLLNVKMALDIEIATYRKLLEGEESRISIPVH 416
>gi|119850791|gb|AAI27242.1| Krt78 protein [Mus musculus]
Length = 492
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 203 KYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYR 258
+ +++ LR N L + E Q E Q+K +EA ++ + +M + L+DY+
Sbjct: 332 RLQSQIGSLRKQNDSLQSAIADAEQQGEMAVRDAQAKLDELEAALRTAKQDMAQMLRDYQ 391
Query: 259 ELMEIKINLDVEIAQYRNLMEAEESSLPT 287
ELM K++LDVEIA YR L+E+EE + T
Sbjct: 392 ELMGTKLSLDVEIAMYRRLLESEECRIST 420
>gi|372466572|ref|NP_001243211.1| keratin, type II cytoskeletal 8 isoform 1 [Homo sapiens]
Length = 511
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 379 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRL 430
>gi|291402252|ref|XP_002717466.1| PREDICTED: vimentin [Oryctolagus cuniculus]
Length = 466
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|55774607|gb|AAV64888.1| desmin [Homo sapiens]
Length = 74
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Query: 215 NYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVE 270
N L + +ELED+ E Q AR+E EI+ L+ EM L++Y++L+ +K+ LDVE
Sbjct: 1 NDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKDEMARHLREYQDLLNVKMALDVE 60
Query: 271 IAQYRNLMEAEES 283
IA YR L+E E+S
Sbjct: 61 IATYRKLLEGEKS 73
>gi|431921643|gb|ELK18995.1| Keratin, type II cytoskeletal 4 [Pteropus alecto]
Length = 532
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
SK A +EA +K+ + E+T L+DY+ELM +K+ LD+EIA YR L+E EE
Sbjct: 408 SKRAELEAALKKAKEELTRMLRDYQELMSVKLALDIEIATYRKLLEGEE 456
>gi|395835417|ref|XP_003790676.1| PREDICTED: keratin, type II cytoskeletal 78 [Otolemur garnettii]
Length = 516
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 64/108 (59%), Gaps = 6/108 (5%)
Query: 181 DNLRKEQ---SSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFA 237
DN+++ + S L E++ + + G E L+AA +T+ + + ++ Q+K
Sbjct: 314 DNMKETKIQISQLHQEIQRLQSQIGSLKKENANLQAA---ITDAEQRGDLALQDAQAKLD 370
Query: 238 RMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
R++A ++ + ++ + L+DY+ELM K++LDVEIA YR L+E EE +
Sbjct: 371 RLDAALRTAKQDLAQLLRDYQELMSTKLSLDVEIATYRRLLEGEECRM 418
>gi|348532767|ref|XP_003453877.1| PREDICTED: alpha-internexin-like [Oreochromis niloticus]
Length = 481
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ LR N L ++ +E+ED+ E Q A +E E++ ++EM L++Y++L+
Sbjct: 319 EIESLRGTNESLEKQLREMEDRHNMEIGNYQESMAELENELRTTKSEMARHLREYQDLLN 378
Query: 263 IKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EE+ + T
Sbjct: 379 VKMALDIEIAAYRKLLEGEETRIGT 403
>gi|158255312|dbj|BAF83627.1| unnamed protein product [Homo sapiens]
Length = 483
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 351 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 404
>gi|74185445|dbj|BAE30193.1| unnamed protein product [Mus musculus]
Length = 466
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 15/110 (13%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E+ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVGALKGTNESLERQMREMEENFALEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES----SLPTY 288
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES LPT+
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPTF 418
>gi|402913880|ref|XP_003919379.1| PREDICTED: vimentin isoform 1 [Papio anubis]
gi|402913882|ref|XP_003919380.1| PREDICTED: vimentin isoform 2 [Papio anubis]
gi|75075845|sp|Q4R4X4.3|VIME_MACFA RecName: Full=Vimentin
gi|97537614|sp|P84198.3|VIME_CERAE RecName: Full=Vimentin
gi|67971018|dbj|BAE01851.1| unnamed protein product [Macaca fascicularis]
gi|76097693|gb|ABA39528.1| vimentin [Chlorocebus aethiops]
gi|355562319|gb|EHH18913.1| Vimentin [Macaca mulatta]
gi|355782668|gb|EHH64589.1| Vimentin [Macaca fascicularis]
gi|380787893|gb|AFE65822.1| vimentin [Macaca mulatta]
gi|383421345|gb|AFH33886.1| vimentin [Macaca mulatta]
Length = 466
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|111185567|gb|AAI19602.1| Krt78 protein [Mus musculus]
gi|121933968|gb|AAI27619.1| Krt78 protein [Mus musculus]
Length = 492
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 203 KYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYR 258
+ +++ LR N L + E Q E Q+K +EA ++ + +M + L+DY+
Sbjct: 332 RLQSQIGSLRKQNDSLQSAIADAEQQGEMAVRDAQAKLDELEAALRTAKQDMAQMLRDYQ 391
Query: 259 ELMEIKINLDVEIAQYRNLMEAEESSLPT 287
ELM K++LDVEIA YR L+E+EE + T
Sbjct: 392 ELMGTKLSLDVEIAMYRRLLESEECRIST 420
>gi|41152128|ref|NP_957067.1| uncharacterized protein LOC393746 [Danio rerio]
gi|37748286|gb|AAH59604.1| Zgc:73275 [Danio rerio]
Length = 447
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 8/91 (8%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRELM 261
E++ LR N L + +E+E+ E S F R+E +I ++ EM L++Y++L+
Sbjct: 309 CELDALRGTNESLERQMREMEENFGMESSGFQDTIGRLEEDIGNMKDEMARHLREYQDLL 368
Query: 262 EIKINLDVEIAQYRNLMEAEES----SLPTY 288
+K+ LD+EIA YR L+E EES LP +
Sbjct: 369 NVKMALDIEIATYRKLLEGEESRIAAPLPNF 399
>gi|181573|gb|AAA35763.1| cytokeratin 8 [Homo sapiens]
Length = 482
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 351 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 404
>gi|391348706|ref|XP_003748585.1| PREDICTED: prelamin-A/C-like [Metaseiulus occidentalis]
Length = 578
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
Query: 61 RTSSGFQVTSSAK-----------GNMEITEVDP-DGKFVKLYNKGSEEQSLGNWQLVRK 108
R SSGF+ S + G + I + D GKF+ L N ++ +LG W++V++
Sbjct: 402 RLSSGFESAGSCEHRDIETKSGCWGPIRIADHDTGSGKFIVLENTTDDDVALGRWRIVQR 461
Query: 109 VQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKF---GSGD-EIST 164
GE K +F ++A +T+WS N + H PP + V++ F G GD ++ST
Sbjct: 462 -SGEQKACHRFPLQFSMKAKQRITLWSANSKKQ-HCPPKDYVLRKIVFPWSGPGDVDLST 519
Query: 165 ILLNTDG 171
+ N G
Sbjct: 520 TIFNPQG 526
>gi|296206226|ref|XP_002750115.1| PREDICTED: vimentin-like isoform 1 [Callithrix jacchus]
Length = 466
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|149021114|gb|EDL78721.1| vimentin, isoform CRA_b [Rattus norvegicus]
Length = 466
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFALEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|355786128|gb|EHH66311.1| hypothetical protein EGM_03280, partial [Macaca fascicularis]
Length = 468
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 336 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 389
>gi|358340098|dbj|GAA48062.1| lamin B [Clonorchis sinensis]
Length = 194
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 76 MEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWS 135
++I+E++P G+FVK++N SE +L +L++ V G++ ++F + + + + ++T+W+
Sbjct: 12 LQISEINPQGRFVKIHNADSEGYNLSACKLMQTVDGDLLNEYEFDQPIYLPSKTSITLWT 71
Query: 136 FNVEGATHEPPHNIVMKNQK---FGSGDEISTILLNTDGELANQ 176
++ + H+ ++ Q +GSG T L + G+L Q
Sbjct: 72 NDINNKLSQQNHSASIRCQNVPCWGSGPNCITSLYSPSGQLLAQ 115
>gi|397466849|ref|XP_003805154.1| PREDICTED: keratin, type II cytoskeletal 8-like [Pan paniscus]
Length = 440
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 308 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRL 359
>gi|62897441|dbj|BAD96661.1| keratin 8 variant [Homo sapiens]
Length = 483
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 351 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 404
>gi|14389299|ref|NP_112402.1| vimentin [Rattus norvegicus]
gi|401365|sp|P31000.2|VIME_RAT RecName: Full=Vimentin
gi|57480|emb|CAA44722.1| vimentin [Rattus norvegicus]
gi|38197662|gb|AAH61847.1| Vimentin [Rattus norvegicus]
Length = 466
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFALEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|402867694|ref|XP_003897973.1| PREDICTED: keratin, type II cytoskeletal 8-like [Papio anubis]
Length = 483
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 351 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 404
>gi|354482483|ref|XP_003503427.1| PREDICTED: vimentin [Cricetulus griseus]
gi|344245951|gb|EGW02055.1| Vimentin [Cricetulus griseus]
Length = 466
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFALEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|49256423|gb|AAH73760.1| Keratin 8 [Homo sapiens]
Length = 483
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 351 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 404
>gi|60826349|gb|AAX36754.1| keratin 8 [synthetic construct]
gi|61365394|gb|AAX42701.1| keratin 8 [synthetic construct]
gi|61372237|gb|AAX43807.1| keratin 8 [synthetic construct]
Length = 484
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 351 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 404
>gi|4504919|ref|NP_002264.1| keratin, type II cytoskeletal 8 isoform 2 [Homo sapiens]
gi|372466577|ref|NP_001243222.1| keratin, type II cytoskeletal 8 isoform 2 [Homo sapiens]
gi|90110027|sp|P05787.7|K2C8_HUMAN RecName: Full=Keratin, type II cytoskeletal 8; AltName:
Full=Cytokeratin-8; Short=CK-8; AltName: Full=Keratin-8;
Short=K8; AltName: Full=Type-II keratin Kb8
gi|400416|emb|CAA52882.1| Keratin 8 [Homo sapiens]
gi|1673575|gb|AAB18966.1| cytokeratin 8 [Homo sapiens]
gi|50368987|gb|AAH75839.1| Keratin 8 [Homo sapiens]
gi|60814481|gb|AAX36303.1| keratin 8 [synthetic construct]
gi|61355391|gb|AAX41135.1| keratin 8 [synthetic construct]
gi|117644418|emb|CAL37704.1| hypothetical protein [synthetic construct]
gi|119617059|gb|EAW96653.1| keratin 8, isoform CRA_c [Homo sapiens]
gi|123984435|gb|ABM83563.1| keratin 8 [synthetic construct]
gi|123998399|gb|ABM86801.1| keratin 8 [synthetic construct]
gi|127796248|gb|AAH00654.3| Keratin 8 [Homo sapiens]
gi|127798644|gb|AAH63513.2| Keratin 8 [Homo sapiens]
gi|164691069|dbj|BAF98717.1| unnamed protein product [Homo sapiens]
Length = 483
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 351 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 404
>gi|397522057|ref|XP_003831097.1| PREDICTED: keratin, type II cytoskeletal 8 isoform 1 [Pan paniscus]
gi|397522059|ref|XP_003831098.1| PREDICTED: keratin, type II cytoskeletal 8 isoform 2 [Pan paniscus]
Length = 483
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 351 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 404
>gi|341865569|ref|NP_001230074.1| vimentin [Equus caballus]
Length = 466
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|206597416|ref|NP_001128275.1| vimentin [Xenopus (Silurana) tropicalis]
gi|197245780|gb|AAI68783.1| vim protein [Xenopus (Silurana) tropicalis]
Length = 461
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 24/116 (20%)
Query: 181 DNLRKEQSSLLLELKETKGRSGKYDTEMNELR------AANYRLTERNKELEDQIEYEQS 234
++ R++ +L E+ KG + Y+ +M E+ AANY Q
Sbjct: 313 NDYRRQIQTLTCEIDAMKGSNESYERQMREMEENFAGEAANY----------------QD 356
Query: 235 KFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
R++ EI ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES ++P +
Sbjct: 357 TIQRLQEEIHNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITVPVH 412
>gi|395827279|ref|XP_003786832.1| PREDICTED: vimentin [Otolemur garnettii]
Length = 466
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|197100240|ref|NP_001127365.1| keratin, type II cytoskeletal 8 [Pongo abelii]
gi|55728569|emb|CAH91026.1| hypothetical protein [Pongo abelii]
Length = 483
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 351 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 404
>gi|261860508|dbj|BAI46776.1| keratin 8 [synthetic construct]
Length = 483
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 351 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 404
>gi|444521919|gb|ELV13240.1| Keratin, type II cytoskeletal 80 [Tupaia chinensis]
Length = 493
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 61/101 (60%), Gaps = 6/101 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E K E+Q E ++K A++EA +++ +
Sbjct: 339 EIADLNVRIQKLRSQILSIKSHCLKLEENIKAAEEQGELAFQDAKAKLAQLEAALQQAKQ 398
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPT 287
+M QL++Y+ELM K+ LD+EIA YR L+E EES LP+
Sbjct: 399 DMARQLREYQELMNTKLALDIEIATYRKLVEGEESRMDLPS 439
>gi|117644550|emb|CAL37770.1| hypothetical protein [synthetic construct]
Length = 483
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 351 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 404
>gi|386782201|ref|NP_001247474.1| keratin, type II cytoskeletal 8 [Macaca mulatta]
gi|384940056|gb|AFI33633.1| keratin, type II cytoskeletal 8 [Macaca mulatta]
gi|387540396|gb|AFJ70825.1| keratin, type II cytoskeletal 8 [Macaca mulatta]
Length = 483
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 351 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 404
>gi|62913980|gb|AAH11373.2| KRT8 protein, partial [Homo sapiens]
Length = 365
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 233 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 286
>gi|148677926|gb|EDL09873.1| lamin B1, isoform CRA_b [Mus musculus]
Length = 341
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 82 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDMLAKERDNSRRMLSDREREMAEIRD 141
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 142 QMQQQLSDYEQLLDVKLALDMEISAYRKLLEGEEERL 178
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKV 109
GN+ I E+D DGKF++L N ++Q +G W+++RK+
Sbjct: 230 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI 265
>gi|114326309|ref|NP_001041541.1| vimentin [Gallus gallus]
gi|138533|sp|P09654.2|VIME_CHICK RecName: Full=Vimentin
gi|212868|gb|AAA49134.1| vimentin [Gallus gallus]
Length = 460
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 55/91 (60%), Gaps = 8/91 (8%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
E++ L+ +N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 322 CEVDALKGSNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLL 381
Query: 262 EIKINLDVEIAQYRNLMEAEES----SLPTY 288
+K+ LD+EIA YR L+E EES +PT+
Sbjct: 382 NVKMALDIEIATYRKLLEGEESRINMPIPTF 412
>gi|138535|sp|P02544.2|VIME_MESAU RecName: Full=Vimentin
gi|387077|gb|AAA37104.1| vimentin, partial [Mesocricetus auratus]
Length = 465
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 308 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFALEAANYQDTIGRLQDE 367
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 368 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 413
>gi|344277646|ref|XP_003410611.1| PREDICTED: vimentin-like [Loxodonta africana]
Length = 466
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
E++ L+ N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 328 CEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLL 387
Query: 262 EIKINLDVEIAQYRNLMEAEES--SLP 286
+K+ LD+EIA YR L+E EES SLP
Sbjct: 388 NVKMALDIEIATYRKLLEGEESRISLP 414
>gi|281348726|gb|EFB24310.1| hypothetical protein PANDA_010511 [Ailuropoda melanoleuca]
Length = 404
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES 283
+K A +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES
Sbjct: 354 AKLAELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEES 403
>gi|114644534|ref|XP_001142346.1| PREDICTED: keratin, type II cytoskeletal 8 isoform 3 [Pan
troglodytes]
Length = 366
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 234 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 287
>gi|38374177|gb|AAR19286.1| class III intermediate filament protein [Danio rerio]
Length = 444
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
++ LR N L + E+E++ E Q AR+E EI+ L+ EM L++Y++L+
Sbjct: 306 CDLESLRGYNESLERQLTEMEERFAIETAGYQDTVARLEDEIQMLKEEMARHLQEYQDLL 365
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 366 NVKLALDIEIATYRKLLEGEESRI 389
>gi|444521922|gb|ELV13243.1| Keratin, type II cytoskeletal [Tupaia chinensis]
Length = 151
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ K A +EA ++R + +M QL+ Y+ELM IK+ LD EIA YR L+E EES L
Sbjct: 51 KGKLAWLEAALQRAEQDMARQLRAYQELMIIKLGLDFEIATYRKLLEGEESRL 103
>gi|326935271|ref|XP_003213698.1| PREDICTED: lamin-B1-like, partial [Meleagris gallopavo]
Length = 275
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVT 132
GN+ I E+D DGKF++L N ++Q +G W+L+RK+ G+ +++ ++AG TVT
Sbjct: 218 GNISIEEIDVDGKFIRLKNTSDQDQPMGGWELIRKI-GDTSAIYRYTSRYVLKAGQTVT 275
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 220 ERNKELEDQIEYEQSKFARMEAEIKRLQTEM----TEQLKDYRELMEIKINLDVEIAQYR 275
+R ELED + EQ F R+ AE +R TEM +Q DY +L+++K+ LD EI+ YR
Sbjct: 105 DRVHELEDTLSKEQENFRRILAENEREVTEMRNRMQQQFSDYEQLLDVKLALDTEISAYR 164
Query: 276 NLMEAEE 282
L+E+EE
Sbjct: 165 KLLESEE 171
>gi|148233954|ref|NP_001091183.1| keratin 5, gene 6 [Xenopus laevis]
gi|120538734|gb|AAI29699.1| LOC100036944 protein [Xenopus laevis]
Length = 591
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
QSK A +EA +++ + +M QL++Y+ELM +K+ LDVEIA YR L+E EE L
Sbjct: 431 QSKLADLEAALQKAKQDMALQLREYQELMNVKLALDVEIATYRKLLEGEEFRL 483
>gi|441593631|ref|XP_003260506.2| PREDICTED: keratin, type II cytoskeletal 8-like [Nomascus
leucogenys]
Length = 297
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+K + +EA ++R + +MT QL +Y+ELM +++ LD+EIA YR L+E EES L
Sbjct: 165 AKLSELEAALQRAKQDMTGQLLEYQELMNVRLTLDIEIATYRKLLEGEESRL 216
>gi|47115317|emb|CAG28618.1| VIM [Homo sapiens]
Length = 466
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
E++ L+ N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 328 CEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLL 387
Query: 262 EIKINLDVEIAQYRNLMEAEES--SLP 286
+K+ LD+EIA YR L+E EES SLP
Sbjct: 388 NVKMALDIEIATYRKLLEGEESRISLP 414
>gi|1353210|sp|P48673.1|VIMB_CARAU RecName: Full=Vimentin beta
gi|388286|gb|AAA21757.1| vimentin beta [Carassius auratus]
Length = 450
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
++ LR N L + +E+ED E Q R+E +I+ + EM L++Y+ L+
Sbjct: 314 CDLEALRGTNGSLERQMREMEDNFSIEASGYQDTIVRLEDDIRNTKDEMARHLREYQNLL 373
Query: 262 EIKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YRNL+E EE + T
Sbjct: 374 NVKMALDIEIATYRNLLEGEEYRITT 399
>gi|426224448|ref|XP_004006382.1| PREDICTED: LOW QUALITY PROTEIN: keratin, type II cytoskeletal 7
[Ovis aries]
Length = 453
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 17/120 (14%)
Query: 166 LLNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKEL 225
L NT E+A+ R I L+ E + K + K + + + E+ EL
Sbjct: 289 LRNTRNEIADMNRAIQRLQAE-------IDNIKNQRAKLEAAIAD--------AEQRGEL 333
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++ ++K +EA +++ + +MT QL++Y+ELM IK+ LD+EIA YR L+E EES L
Sbjct: 334 A--VKDARAKQEDLEAALQKAKQDMTRQLREYQELMNIKLALDIEIATYRKLLEGEESRL 391
>gi|332217894|ref|XP_003258097.1| PREDICTED: neurofilament heavy polypeptide [Nomascus leucogenys]
Length = 997
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 19/123 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 303 VNTDAMRSAQEEITEYRRQLQART---------------TELEALKSTKDSLERQRSELE 347
Query: 227 DQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ + + Q +++AE++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 348 DRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 407
Query: 283 SSL 285
+
Sbjct: 408 CRI 410
>gi|355564252|gb|EHH20752.1| Type II hair keratin Hb4 [Macaca mulatta]
Length = 600
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 17/120 (14%)
Query: 166 LLNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKEL 225
L NT E+ R+I L+ E ++ TK + K L AA + E ++
Sbjct: 374 LRNTRNEINELTRLIQRLKAE-------IEHTKAQRAK-------LEAA---VAEAERQG 416
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E + + K A +E +++ +M QL++Y+EL+ K+ LD+EIA YR L+E EES L
Sbjct: 417 EATLNDAKCKLADLECALQQANQDMARQLREYQELINAKLGLDIEIATYRRLLEGEESRL 476
>gi|354504785|ref|XP_003514454.1| PREDICTED: keratin, type II cytoskeletal 8-like, partial
[Cricetulus griseus]
Length = 141
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ K A +EA ++R + +M QL++Y+ELM +K+ LD EIA YR L+E EE L
Sbjct: 22 KGKLAWLEAALQRAKQDMARQLREYQELMIVKLGLDFEIATYRRLLEGEEQRL 74
>gi|449510121|ref|XP_004186114.1| PREDICTED: LOW QUALITY PROTEIN: peripherin [Taeniopygia guttata]
Length = 489
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 214 ANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDV 269
+N L + +E+ED+ E Q R+E EI++++ EM L++Y++L+ +K+ LD+
Sbjct: 190 SNEALQRQMQEMEDEFGEEIGNYQDVVGRLEQEIQQMKEEMARHLREYQDLLNVKMALDI 249
Query: 270 EIAQYRNLMEAEESSL 285
EIA YR L+E EES +
Sbjct: 250 EIATYRKLLEGEESRI 265
>gi|1353212|sp|P48670.1|VIME_CRIGR RecName: Full=Vimentin
gi|387058|gb|AAA37029.1| vimentin, partial [Cricetulus sp.]
Length = 448
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 291 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFALEAANYQDTIGRLQDE 350
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 351 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 396
>gi|7161769|emb|CAB76829.1| type II hair keratin 3 [Homo sapiens]
gi|119617029|gb|EAW96623.1| keratin, hair, basic, 4 [Homo sapiens]
Length = 600
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
+ N+R E + L ++ K + +L AA + E ++ E + + K A +
Sbjct: 374 LRNIRNEINELTRLIQRLKAEIEHAKAQRAKLEAA---VAEAEQQGEATLSDAKCKLADL 430
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E +++ + +M QL++Y+ELM K+ LD+EIA YR L+E EES L
Sbjct: 431 ECALQQAKQDMARQLREYQELMNAKLGLDIEIATYRRLLEGEESRL 476
>gi|449492211|ref|XP_004175548.1| PREDICTED: LOW QUALITY PROTEIN: vimentin [Taeniopygia guttata]
Length = 459
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 55/91 (60%), Gaps = 8/91 (8%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
E++ L+ +N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 321 CEVDALKGSNESLERQMREMEENFALEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLL 380
Query: 262 EIKINLDVEIAQYRNLMEAEES----SLPTY 288
+K+ LD+EIA YR L+E EES +PT+
Sbjct: 381 NVKMALDIEIATYRKLLEGEESRINMPIPTF 411
>gi|432099757|gb|ELK28792.1| Vimentin [Myotis davidii]
Length = 389
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 15/110 (13%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 233 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 292
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES----SLPTY 288
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES LPT+
Sbjct: 293 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPTF 342
>gi|57114172|ref|NP_001009148.1| vimentin [Pan troglodytes]
gi|56342340|dbj|BAD74030.1| vimentin [Pan troglodytes verus]
Length = 466
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESTEYRRQVQSPTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|7447206|pir||T16016 hypothetical protein F10C1.7b - Caenorhabditis elegans
Length = 549
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 59 EERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYN-KGSEEQSLGNWQLVRKVQGEVKTSF 117
E +T S F+ AKGN+ I E DP GK++ L N GS + + N+++ R + G F
Sbjct: 417 EVQTRSSFK--RHAKGNVSIVECDPQGKYIILENTSGSVAEDVSNFEIRRVIDGVQAFVF 474
Query: 118 KFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDG 171
+ L I+ G + ++ N G + P +IVM++ +G G + T L N+ G
Sbjct: 475 RLPSHLVIQQHGHLKIYGRNA-GEINLTPDSIVMESHASWGQGRQAETFLYNSHG 528
>gi|324507503|gb|ADY43180.1| Lamin-1 [Ascaris suum]
Length = 511
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 84 DGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATH 143
DG+FV+L N G + S+G W + + +G+ + ++FH +++G +TVWS + G
Sbjct: 406 DGEFVRLLNHGIQTVSIGGWMIRSESEGK-EAVYRFHPQQILDSGTAITVWSAS-SGKVE 463
Query: 144 EPPHNIVMKNQKFGSGDEISTILLNTDGELANQERIIDNLRKEQSSLL 191
P +IVMK Q++ +G +++ G + D+ ++ S+LL
Sbjct: 464 MSPGDIVMKTQRWPTGKYKKITVVDDLGTVVVMHESADSSDRQASTLL 511
>gi|390461837|ref|XP_002746803.2| PREDICTED: keratin, type II cytoskeletal 8-like [Callithrix
jacchus]
Length = 481
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 7/92 (7%)
Query: 196 ETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLK 255
E++G G+ + +R A +R R + L+D +K +EA ++R + +M +QL
Sbjct: 318 ESEGLKGQRASLEAAIRDAEHR---REQALKDA----HTKQQELEATLQRAKQDMAKQLH 370
Query: 256 DYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 371 EYQELMNVKLALDIEIATYRKLLEGEESRLES 402
>gi|332859533|ref|XP_515058.3| PREDICTED: neurofilament heavy polypeptide isoform 3 [Pan
troglodytes]
Length = 1029
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 307 VNTDAMRSAQEEITEYRRQLQART---------------TELEALKSTKDSLERQRSELE 351
Query: 227 DQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ + + Q +++AE++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 352 DRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 411
>gi|1841430|emb|CAA33366.1| heavy neurofilament subunit [Homo sapiens]
Length = 1020
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 306 VNTDAMRSAQEEITEYRRQLQART---------------TELEALKSTKDSLERQRSELE 350
Query: 227 DQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ + + Q +++AE++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 351 DRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 410
>gi|397522129|ref|XP_003831131.1| PREDICTED: uncharacterized protein LOC100982526 [Pan paniscus]
Length = 1263
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 181 DNLRKEQSSLLLELKETKGR-SGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
DNLR ++ + EL T R G+ D + + + E + E ++ Q K +
Sbjct: 461 DNLRDTKNEIA-ELTRTIQRLQGEADAAKKQCQQLQTAIAEAEQRGELALKDAQKKLGDL 519
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ + + + ++T L+DY+ELM +K+ LDVEIA YR L+E+EES +
Sbjct: 520 DVALHQAKEDLTRLLRDYQELMNVKLALDVEIATYRKLLESEESRM 565
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 17/117 (14%)
Query: 166 LLNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKEL 225
L NT E+A R+I LR E ++ + L+A+ +R
Sbjct: 1091 LKNTKSEIAELNRMIQRLRAEIENI--------------KKQCQTLQASVADAEQRG--- 1133
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
E+ ++ SK +EA +++ + E+ L++Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 1134 ENALKDAHSKRVELEAALQQAKEELARMLREYQELMSVKLALDIEIATYRKLLEGEE 1190
>gi|62414289|ref|NP_003371.2| vimentin [Homo sapiens]
gi|397522328|ref|XP_003831224.1| PREDICTED: vimentin [Pan paniscus]
gi|426364082|ref|XP_004049151.1| PREDICTED: vimentin [Gorilla gorilla gorilla]
gi|55977767|sp|P08670.4|VIME_HUMAN RecName: Full=Vimentin
gi|37850|emb|CAA39600.1| unnamed protein product [Homo sapiens]
gi|13111801|gb|AAH00163.2| Vimentin [Homo sapiens]
gi|21040384|gb|AAH30573.1| Vimentin [Homo sapiens]
gi|22854562|gb|AAN09720.1| CTCL tumor antigen HD-CL-06 [Homo sapiens]
gi|44890587|gb|AAH66956.1| Vimentin [Homo sapiens]
gi|62896573|dbj|BAD96227.1| vimentin variant [Homo sapiens]
gi|62896763|dbj|BAD96322.1| vimentin variant [Homo sapiens]
gi|119606621|gb|EAW86215.1| vimentin, isoform CRA_a [Homo sapiens]
gi|119606622|gb|EAW86216.1| vimentin, isoform CRA_a [Homo sapiens]
gi|149846002|emb|CAA79613.2| intermediate filament protein [Homo sapiens]
gi|158254718|dbj|BAF83332.1| unnamed protein product [Homo sapiens]
gi|167887749|gb|ACA06101.1| vimentin variant 1 [Homo sapiens]
gi|167887750|gb|ACA06102.1| vimentin variant 2 [Homo sapiens]
gi|307685975|dbj|BAJ20918.1| vimentin [synthetic construct]
gi|343959778|dbj|BAK63746.1| vimentin [Pan troglodytes]
Length = 466
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESTEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|54696084|gb|AAV38414.1| vimentin [synthetic construct]
gi|61366117|gb|AAX42816.1| vimentin [synthetic construct]
gi|61371578|gb|AAX43693.1| vimentin [synthetic construct]
Length = 467
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESTEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|124286811|ref|NP_035034.2| neurofilament heavy polypeptide [Mus musculus]
gi|94730399|sp|P19246.3|NFH_MOUSE RecName: Full=Neurofilament heavy polypeptide; Short=NF-H; AltName:
Full=200 kDa neurofilament protein; AltName:
Full=Neurofilament triplet H protein
gi|195934791|gb|AAI68406.1| Neurofilament, heavy polypeptide [synthetic construct]
Length = 1090
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 304 VNTDAMRSAQEEITEYRRQLQA---------------RTTELEALKSTKESLERQRSELE 348
Query: 227 DQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ + + Q ++++E++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 349 DRHQADIASYQDAIQQLDSELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 408
>gi|444713639|gb|ELW54535.1| Keratin, type II cytoskeletal 8 [Tupaia chinensis]
Length = 240
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 39/51 (76%)
Query: 235 KFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
K +++EA +++ + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 109 KLSQLEAALQQAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESPL 159
>gi|226726294|sp|P12036.4|NFH_HUMAN RecName: Full=Neurofilament heavy polypeptide; Short=NF-H; AltName:
Full=200 kDa neurofilament protein; AltName:
Full=Neurofilament triplet H protein
gi|6470331|gb|AAF13722.1|AF203032_1 neurofilament protein [Homo sapiens]
gi|49522839|gb|AAH73969.1| NEFH protein [Homo sapiens]
gi|168269480|dbj|BAG09867.1| neurofilament heavy polypeptide [synthetic construct]
Length = 1026
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 306 VNTDAMRSAQEEITEYRRQLQART---------------TELEALKSTKDSLERQRSELE 350
Query: 227 DQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ + + Q +++AE++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 351 DRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 410
>gi|32483416|ref|NP_066554.2| neurofilament heavy polypeptide [Homo sapiens]
gi|119580209|gb|EAW59805.1| neurofilament, heavy polypeptide 200kDa, isoform CRA_b [Homo
sapiens]
Length = 1020
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 306 VNTDAMRSAQEEITEYRRQLQART---------------TELEALKSTKDSLERQRSELE 350
Query: 227 DQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ + + Q +++AE++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 351 DRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 410
>gi|194380258|dbj|BAG63896.1| unnamed protein product [Homo sapiens]
Length = 1025
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 305 VNTDAMRSAQEEITEYRRQLQART---------------TELEALKSTKDSLERQRSELE 349
Query: 227 DQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ + + Q +++AE++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 350 DRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 409
>gi|167887751|gb|ACA06103.1| vimentin variant 3 [Homo sapiens]
Length = 431
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESTEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|340219|gb|AAA61279.1| vimentin [Homo sapiens]
Length = 466
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESTEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|387493|gb|AAA39813.1| neurofilament largest subunit, partial [Mus musculus]
Length = 1087
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 301 VNTDAMRSAQEEITEYRRQLQA---------------RTTELEALKSTKESLERQRSELE 345
Query: 227 DQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ + + Q ++++E++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 346 DRHQADIASYQDAIQQLDSELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 405
>gi|410900918|ref|XP_003963943.1| PREDICTED: alpha-internexin-like [Takifugu rubripes]
Length = 450
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ LR AN L + E+ED E Q ++++AE++ ++ EM + L++Y++L+
Sbjct: 315 EIETLRGANESLERQISEMEDAHNAEVTTLQDTISQLDAELRSMKGEMAQHLREYQDLLN 374
Query: 263 IKINLDVEIAQYRNLMEAEES 283
+K+ LD+EIA YR L+E EE+
Sbjct: 375 VKMALDIEIAAYRKLLEGEET 395
>gi|28972433|dbj|BAC65670.1| mKIAA0845 protein [Mus musculus]
Length = 1046
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 314 VNTDAMRSAQEEITEYRRQLQART---------------TELEALKSTKESLERQRSELE 358
Query: 227 DQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ + + Q ++++E++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 359 DRHQADIASYQDAIQQLDSELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 418
>gi|444521928|gb|ELV13249.1| Keratin, type II cuticular Hb4 [Tupaia chinensis]
Length = 455
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+TE ++ E + + K A +E +++ + +M QL++Y+ELM IK+ LD+EIA YR L
Sbjct: 389 VTEAEQQGEAALNDAKCKLADLEGALQQAKQDMARQLREYQELMNIKLALDIEIATYRRL 448
Query: 278 MEAEE 282
+E EE
Sbjct: 449 LEGEE 453
>gi|27529742|dbj|BAA74868.2| KIAA0845 protein [Homo sapiens]
Length = 1034
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 314 VNTDAMRSAQEEITEYRRQLQART---------------TELEALKSTKDSLERQRSELE 358
Query: 227 DQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ + + Q +++AE++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 359 DRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 418
>gi|300797165|ref|NP_001179264.1| keratin, type II cuticular Hb4 [Bos taurus]
gi|296487886|tpg|DAA29999.1| TPA: keratin 84 [Bos taurus]
Length = 593
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSK 235
DNLR + E+ E + E+ +A +L E E Q E + K
Sbjct: 363 CDNLRNTRD----EMNELNRLIQRLKAEIEHAKAQRCKLEAAVAEAEQQGEAALNDAKCK 418
Query: 236 FARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
A +E +++ + +M QLK+Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 419 LAELEGALQQAKQDMARQLKEYQELMNVKLALDIEIATYRRLLEGEE 465
>gi|62896523|dbj|BAD96202.1| vimentin variant [Homo sapiens]
Length = 466
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESTEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|21757045|dbj|BAC05002.1| unnamed protein product [Homo sapiens]
Length = 454
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 297 LRQAKQESTEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 356
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 357 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 402
>gi|349604827|gb|AEQ00268.1| Vimentin-like protein, partial [Equus caballus]
Length = 270
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 127 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 186
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 187 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 232
>gi|1419564|emb|CAA67203.1| cytokeratin [Homo sapiens]
Length = 279
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ +D+EIA YR L+E EES L +
Sbjct: 147 AKLSELEAALQRAKQDMARQLREYQELMNVKLAMDIEIATYRKLLEGEESRLES 200
>gi|426224440|ref|XP_004006378.1| PREDICTED: keratin, type II cuticular Hb4 [Ovis aries]
Length = 593
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSK 235
DNLR + E+ E + E+ +A +L E E Q E + K
Sbjct: 363 CDNLRNTRD----EINELNRLIQRLKAEIEHAKAQRCKLEAAVAEAEQQGEAALNDAKCK 418
Query: 236 FARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
A +E +++ + +M QLK+Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 419 LAELEGALQQAKQDMARQLKEYQELMNVKLALDIEIATYRRLLEGEE 465
>gi|345309606|ref|XP_001521528.2| PREDICTED: lamin-B2, partial [Ornithorhynchus anatinus]
Length = 469
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 72 AKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTV 131
A GN+ I EVD +GKFV+L N ++QSLGNW+L R++ + ++KF + AG TV
Sbjct: 409 ATGNISIEEVDLEGKFVQLKNNSEKDQSLGNWRLKRQIGEGEEIAYKFTPKYVLRAGQTV 468
Query: 132 T 132
+
Sbjct: 469 S 469
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
ELKE + R +++ L+ +R +ELE+ + E+ KF ++ E E+ ++
Sbjct: 245 ELKEARVRMESLSYQLSSLQKQASAAEDRIRELEEMLAGERDKFRKLLDSKEREMTEMRD 304
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M QL +Y+EL+++K+ LD+EI YR L+E EE L
Sbjct: 305 QMQLQLAEYQELLDVKLALDMEINAYRKLLEGEEERL 341
>gi|403296699|ref|XP_003939235.1| PREDICTED: keratin, type II cytoskeletal 80 [Saimiri boliviensis
boliviensis]
Length = 452
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E K E+Q E ++K A++EA +++ +
Sbjct: 298 EITDLNVRIQKLRSQILSVKSHCLKLEENIKAAEEQGELAFQDAKTKLAQLEAALQQAKQ 357
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
+M QL++Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 358 DMARQLREYQELMNVKLALDIEIATYRKLVEGEE 391
>gi|440896108|gb|ELR48133.1| Keratin, type II cytoskeletal 7 [Bos grunniens mutus]
Length = 466
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 17/120 (14%)
Query: 166 LLNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKEL 225
L NT E+A+ R + L+ E S+ K + K + + + E+ EL
Sbjct: 302 LRNTRNEIADMNRAVQRLQAEIDSV-------KNQRAKLEAAIAD--------AEQRGEL 346
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++ ++K +EA +++ + +MT QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 347 A--VKDARAKQEDLEAALQKAKQDMTRQLREYQELMNVKLALDIEIATYRKLLEGEESRL 404
>gi|350583957|ref|XP_003355445.2| PREDICTED: keratin, type II cuticular Hb4 [Sus scrofa]
Length = 593
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSK 235
DNLR + E+ E + + E+ +A +L + E Q E +SK
Sbjct: 373 CDNLRSTRD----EINELNRLIQRLNAEIEHAKAQRAKLEAAVAQAEQQGEAALNDAKSK 428
Query: 236 FARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
A +E +++ + +M QL++Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 429 LADLEGALQQAKQDMARQLREYQELMNVKLALDIEIATYRRLLEGEE 475
>gi|297708570|ref|XP_002831036.1| PREDICTED: neurofilament heavy polypeptide [Pongo abelii]
Length = 999
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 305 VNTDAMRSAQEEITEYRRQLQART---------------TELEALKSTKDSLERQRSELE 349
Query: 227 DQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ + + Q +++AE++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 350 DRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 409
>gi|290563247|ref|NP_001166511.1| vimentin [Cavia porcellus]
gi|194245416|gb|ACF35341.1| vimentin [Cavia porcellus]
Length = 464
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 307 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 366
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES S+P
Sbjct: 367 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISMP 412
>gi|147903569|ref|NP_001079855.1| uncharacterized protein LOC379545 [Xenopus laevis]
gi|33417104|gb|AAH56020.1| MGC68948 protein [Xenopus laevis]
Length = 457
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 62/102 (60%), Gaps = 6/102 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQT 248
++ E++ + E++ L+ N L + K++E+Q + + + R+E E++ ++
Sbjct: 302 DMNESRRQIQSLKCEIDGLKGTNEALLRQMKDMEEQFGMDAANYHDTIGRLEQEVQHMKE 361
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
EM L++Y++L+ +K+ LD+EIA YR L+E EES ++P +
Sbjct: 362 EMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITVPIH 403
>gi|351696160|gb|EHA99078.1| Neurofilament heavy polypeptide [Heterocephalus glaber]
Length = 1101
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 66/124 (53%), Gaps = 21/124 (16%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 410 VNTDAMRSAQEEITEYRRQLQA---------------RTTELEALKSTKDSLERQRSELE 454
Query: 227 DQ-----IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAE 281
D+ + Y+++ +++ E++ + EM QL++Y++L+ +K+ LD+EIA YR L+E E
Sbjct: 455 DRHQADIVSYQEA-IQQLDTELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGE 513
Query: 282 ESSL 285
E +
Sbjct: 514 ECRI 517
>gi|410964631|ref|XP_003988857.1| PREDICTED: keratin, type II cytoskeletal 7 [Felis catus]
Length = 412
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLP 286
+EA + R + +M QL++Y+ELM +KI LD+EIA YR L+E EES L
Sbjct: 301 LEAALHRAKQDMARQLREYQELMNVKIALDIEIATYRKLLEGEESRLA 348
>gi|301612555|ref|XP_002935787.1| PREDICTED: keratin, type II cytoskeletal cochleal-like [Xenopus
(Silurana) tropicalis]
Length = 517
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 17/120 (14%)
Query: 166 LLNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKEL 225
L NT E+A+ R+I+ LR E ++ + + +L A +TE +
Sbjct: 340 LRNTKNEVADLNRMINRLRGEIETV--------------NAQRGKLEGA---ITEAEERG 382
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E + + K A +E +++ + +M QL++Y+ELM +K+ LD+EIA YR L+E EE L
Sbjct: 383 EMATKDAKKKLADLEEGLQKAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEEGRL 442
>gi|291389183|ref|XP_002711158.1| PREDICTED: keratin 86-like [Oryctolagus cuniculus]
Length = 607
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES 283
+ K A +EA ++R + +M +QL++Y+ELM +K+ LD EIA YR L+E EES
Sbjct: 556 KGKLAWLEATLQRAKQDMVQQLREYQELMIVKLGLDFEIATYRRLLEGEES 606
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+T+ ++ E + +SK A +EA +++ + +M LK+Y+E+M K+ LD+EIA YR L
Sbjct: 363 VTQSEQQGEGALNDARSKLAGLEAALQKAKQDMACLLKEYQEVMNSKLGLDIEIATYRRL 422
Query: 278 MEAEESSL 285
+E EE L
Sbjct: 423 LEGEEHRL 430
>gi|158962631|sp|Q5R1W8.4|VIME_PANTR RecName: Full=Vimentin
gi|146741510|dbj|BAF62411.1| vimentin [Pan troglodytes verus]
Length = 466
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESTEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 369 IQDMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 414
>gi|156119465|ref|NP_001095227.1| keratin, type II cytoskeletal [Xenopus laevis]
gi|125106|sp|P16878.2|K2C5_XENLA RecName: Full=Keratin, type II cytoskeletal; AltName:
Full=XENCK55(5/6)
gi|64626|emb|CAA32587.1| unnamed protein product [Xenopus laevis]
Length = 513
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 26/137 (18%)
Query: 172 ELANQERIIDNLRKEQSSLLLELKETKGRSG----KYDTEMNELRAANYRL--------T 219
++AN+ R N S EL+ GR G TE++EL A RL
Sbjct: 307 DIANKSRA--NAESAYQSKFQELQAAAGRHGDDLRSTKTEISELNRAMQRLQAEIESVKA 364
Query: 220 ERNKELEDQI-EYEQ----------SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLD 268
+R K LE QI E E+ SK A +EA +++ + +M QL++Y+ELM +K+ LD
Sbjct: 365 QRAK-LEAQIAEAEERGELALKDARSKLAELEAALQKAKQDMARQLREYQELMNVKLALD 423
Query: 269 VEIAQYRNLMEAEESSL 285
+EIA YR L+E EE+ +
Sbjct: 424 IEIATYRKLLEGEENRI 440
>gi|200022|gb|AAA39809.1| neurofilament protein [Mus musculus]
gi|226537|prf||1601423A neurofilament protein NF-H
Length = 1072
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 304 VNTDAMRSAQEEITEYRRQLQA---------------RTTELEALKSTKESLERQRSELE 348
Query: 227 DQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ + + Q ++++E++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 349 DRHQADIASYQDAIQQLDSELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 408
>gi|449265567|gb|EMC76745.1| Keratin, type II cytoskeletal 75, partial [Columba livia]
Length = 592
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 17/120 (14%)
Query: 166 LLNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKEL 225
L NT GE++ R+I +R E ++ T+ + T + + E EL
Sbjct: 399 LRNTKGEISELNRLIQRIRSE-------IENTRNQCATLQTAVAD--------AEERGEL 443
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++ ++K +E +++ + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 444 --ALKDAKAKMIELEDALQKAKADMARQLREYQELMNVKLALDIEIATYRKLLEGEESRL 501
>gi|463250|emb|CAA83229.1| Neurofilament protein, high molecular weight subunit (NF-H) [Mus
musculus]
Length = 1071
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 303 VNTDAMRSAQEEITEYRRQLQA---------------RTTELEALKSTKESLERQRSELE 347
Query: 227 DQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ + + Q ++++E++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 348 DRHQADIASYQDAIQQLDSELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 407
>gi|355713797|gb|AES04792.1| peripherin [Mustela putorius furo]
Length = 111
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 41/54 (75%), Gaps = 2/54 (3%)
Query: 237 ARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
AR+E E+++L+ EM L++Y+EL+ +K+ LD+EIA YR L+E EES S+P +
Sbjct: 1 ARLEEELRQLKEEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPIH 54
>gi|62079271|ref|NP_001014289.1| uncharacterized protein LOC366990 [Rattus norvegicus]
gi|51260831|gb|AAH79419.1| Similar to RIKEN cDNA 1700011A15 [Rattus norvegicus]
Length = 179
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ K A +EA ++R + +M QL++Y+ELM +K+ LD EIA YR L+E EE L
Sbjct: 65 KGKLAWLEAALQRARQDMARQLREYQELMIVKLGLDFEIATYRRLLEGEEQRL 117
>gi|410963254|ref|XP_003988180.1| PREDICTED: vimentin [Felis catus]
Length = 466
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES +LP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALP 414
>gi|149064295|gb|EDM14498.1| rCG46767, isoform CRA_b [Rattus norvegicus]
Length = 514
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 292 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDMLAKERDNSRRMLSDKEREMAEIRD 351
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 352 QMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERL 388
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 74 GNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKV 109
GN+ I E+D DGKF++L N ++Q +G W+++RK+
Sbjct: 440 GNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKI 475
>gi|4761082|gb|AAD29246.1|AF101063_1 intermediate filament filarin [Hirudo medicinalis]
Length = 597
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Query: 71 SAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGT 130
+A+G + I+E PDGKF+ L N G + LG + L RKV G+ + F ++
Sbjct: 486 NARGPVSISECSPDGKFIVLENTGKRREELGGFTLKRKVDGKDVPVYTFKADAGVDPHMK 545
Query: 131 VTVWSFNVEGA--THEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
+ +W V+GA ++ +I + +G+G I+T L N+ G+
Sbjct: 546 IKLW---VKGAKPSNATASDIEVDIIDWGTGQNITTQLFNSSGQ 586
>gi|363745020|ref|XP_001232221.2| PREDICTED: keratin, type II cytoskeletal 75 [Gallus gallus]
Length = 709
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 17/120 (14%)
Query: 166 LLNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKEL 225
L NT GE++ R+I +R E ++ T+ + T + + +E EL
Sbjct: 427 LRNTKGEISELNRLIQRIRAE-------IENTRNQCATLQTAIGD--------SEERGEL 471
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++ ++K +E +++ + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 472 --ALKDAKAKMMELEDALQKAKADMARQLREYQELMNVKLALDIEIATYRKLLEGEESRL 529
>gi|327274472|ref|XP_003222001.1| PREDICTED: vimentin-like [Anolis carolinensis]
Length = 465
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
E++ L+ N L + +E+ED E Q R++ +I ++ EM+ L++++EL+
Sbjct: 329 CEVDALKGTNESLERQMREMEDNFALEAANCQDTINRLQDDIHNMKEEMSRHLREHQELL 388
Query: 262 EIKINLDVEIAQYRNLMEAEESSL----PTY 288
+K+ LD+EIA YR L+E EES + PT+
Sbjct: 389 NVKMALDIEIATYRKLLEGEESRISVPVPTF 419
>gi|73948978|ref|XP_856478.1| PREDICTED: vimentin isoform 12 [Canis lupus familiaris]
gi|301766514|ref|XP_002918676.1| PREDICTED: vimentin-like [Ailuropoda melanoleuca]
Length = 466
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 309 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 368
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES +LP
Sbjct: 369 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALP 414
>gi|126324953|ref|XP_001380169.1| PREDICTED: neurofilament heavy polypeptide [Monodelphis domestica]
Length = 1027
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 21/121 (17%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ QS TE+ L+ L + +LE
Sbjct: 344 VNTDAMRSAQEEITEYRRQLQSKT---------------TELEALKGTKDSLERQRSDLE 388
Query: 227 DQ-----IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAE 281
D+ I Y+++ ++++E++ + EM QL++Y++L+ +K+ LD+EIA YR L+E E
Sbjct: 389 DRHHADVISYQEA-IQQLDSELRSTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGE 447
Query: 282 E 282
E
Sbjct: 448 E 448
>gi|126341294|ref|XP_001368237.1| PREDICTED: vimentin-like [Monodelphis domestica]
Length = 467
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 310 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 369
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES +LP
Sbjct: 370 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALP 415
>gi|2370337|emb|CAA04656.1| cytokeratin 8 [Notophthalmus viridescens]
Length = 496
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 17/120 (14%)
Query: 166 LLNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKEL 225
L NT E+A RII+ L+ E D N+ + E + +
Sbjct: 296 LRNTKNEIAEMNRIINRLQSE-----------------IDALKNQRANLEAAIAEAEESV 338
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E I+ +SK A +EA + + + +M QL++Y+ELM +K+ LD+EIA YR L+E EE+ L
Sbjct: 339 ELAIKDARSKMAELEAALNKAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEENRL 398
>gi|310756816|gb|ADP20549.1| vimentin [Fukomys anselli]
Length = 306
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 149 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 208
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 209 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 254
>gi|118102801|ref|XP_418091.2| PREDICTED: glial fibrillary acidic protein [Gallus gallus]
Length = 422
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRELM 261
++ LR +N L + +ELE++ E S + R+E +I L+ EM L++Y++L+
Sbjct: 284 CDLEALRGSNESLERQLRELEERYALETSAYQDTVGRLEEDIHSLKEEMGRHLQEYQDLL 343
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 344 NVKLALDIEIATYRKLLEGEESRI 367
>gi|20977259|gb|AAM33344.1|AF506734_1 glial fibrillary acidic protein [Danio rerio]
Length = 360
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 211 LRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKIN 266
R +N L + +E+E++ E Q AR+E EI+ L+ EM L++Y++L+ +K+
Sbjct: 227 FRGSNESLERQLREMEERFAIETAGYQDTVARLEDEIQMLKEEMARHLQEYQDLLNVKLA 286
Query: 267 LDVEIAQYRNLMEAEESSL 285
LD+EIA YR L+E EES +
Sbjct: 287 LDIEIATYRKLLEGEESRI 305
>gi|432901997|ref|XP_004076983.1| PREDICTED: alpha-internexin-like [Oryzias latipes]
Length = 459
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 207 EMNELRAANYRLTERNKELED----QIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ LR AN L + E+ED +I Q +++E++ L+ EM + L++Y++L+
Sbjct: 324 EIETLRGANESLERQIGEMEDTHNAEITAMQDTINHLDSELRNLKGEMAQHLREYQDLLN 383
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EE+
Sbjct: 384 VKMALDIEIAAYRKLLEGEETHF 406
>gi|332206141|ref|XP_003252150.1| PREDICTED: LOW QUALITY PROTEIN: keratin, type II cuticular Hb4
[Nomascus leucogenys]
Length = 595
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+ E + E + + K A +E +++ + +M QL++Y+ELM K+ LD+EIA YR L
Sbjct: 407 VAEAEQHGEATLNDAKCKLADLECALQQAKQDMARQLREYQELMNAKLGLDIEIATYRRL 466
Query: 278 MEAEESSL 285
+E EES L
Sbjct: 467 LEGEESRL 474
>gi|296211719|ref|XP_002752538.1| PREDICTED: keratin, type II cytoskeletal 80 isoform 2 [Callithrix
jacchus]
Length = 422
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 60/101 (59%), Gaps = 6/101 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E K E+Q E ++K A++EA +++ +
Sbjct: 298 EIADLNVRIQKLRSQILSVKSHCLKLEENIKAAEEQGELAFQDAKTKLAQLEAALQQAKQ 357
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPT 287
+M QL+ Y+ELM +K+ LD+EIA YR L+E EE LP+
Sbjct: 358 DMARQLRKYQELMNVKLALDIEIATYRKLVEGEEGRMDLPS 398
>gi|16552261|dbj|BAB71275.1| unnamed protein product [Homo sapiens]
Length = 410
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 288 LRQAKQESTEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 347
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 348 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 393
>gi|395540672|ref|XP_003772276.1| PREDICTED: keratin, type II cytoskeletal 1 [Sarcophilus harrisii]
Length = 561
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 22/116 (18%)
Query: 193 ELKETKGRSGK----YDTEMNEL-------RAANYRLTERNKELEDQI-EYEQ------- 233
EL+ T G+ G+ TE++EL RA R+ ++N +E I E EQ
Sbjct: 349 ELQITAGKHGEDVKVLKTEISELNRTIQRLRAEIDRVKKQNASVEQAILEAEQKGEKTVK 408
Query: 234 ---SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLP 286
K ++E +++ + E T L+DY+EL+ +K++LDVEIA YR L+E EES L
Sbjct: 409 DAQDKLVQLEDALQQAKEEFTRLLRDYQELLSVKLSLDVEIATYRKLLEGEESRLS 464
>gi|344266015|ref|XP_003405076.1| PREDICTED: keratin, type II cytoskeletal 7-like [Loxodonta
africana]
Length = 463
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+EA ++R + +M QL++Y+ELM IK+ LD+EIA YR L+E EES L
Sbjct: 357 LEAALQRAKQDMARQLREYQELMNIKLALDIEIATYRKLLEGEESRL 403
>gi|426372632|ref|XP_004053225.1| PREDICTED: keratin, type II cytoskeletal 79 [Gorilla gorilla
gorilla]
Length = 535
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 181 DNLRKEQSSLLLELKETKGR-SGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
DNLR ++ + EL T R G+ D + + + E + E ++ Q K +
Sbjct: 353 DNLRDTKNEIA-ELTRTIQRLQGEADAAKKQCQQLQTAIAEAEQRGELALKDAQKKLGDL 411
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ + + + ++T L+DY+ELM +K+ LDVEIA YR L+E+EES +
Sbjct: 412 DVALHQAKEDLTRLLRDYQELMNVKLALDVEIATYRKLLESEESRM 457
>gi|181400|gb|AAA35748.1| cytokeratin 8 [Homo sapiens]
Length = 483
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 39/52 (75%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+K + +EA ++R + +M QL++Y+ELM +K+ LD++IA YR L+E EES L
Sbjct: 351 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIDIATYRKLLEGEESPL 402
>gi|296211717|ref|XP_002752537.1| PREDICTED: keratin, type II cytoskeletal 80 isoform 1 [Callithrix
jacchus]
Length = 452
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 60/101 (59%), Gaps = 6/101 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E K E+Q E ++K A++EA +++ +
Sbjct: 298 EIADLNVRIQKLRSQILSVKSHCLKLEENIKAAEEQGELAFQDAKTKLAQLEAALQQAKQ 357
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPT 287
+M QL+ Y+ELM +K+ LD+EIA YR L+E EE LP+
Sbjct: 358 DMARQLRKYQELMNVKLALDIEIATYRKLVEGEEGRMDLPS 398
>gi|114051856|ref|NP_001039876.1| keratin, type II cytoskeletal 7 [Bos taurus]
gi|122135340|sp|Q29S21.1|K2C7_BOVIN RecName: Full=Keratin, type II cytoskeletal 7; AltName:
Full=Cytokeratin-7; Short=CK-7; AltName: Full=Keratin-7;
Short=K7; AltName: Full=Type-II keratin Kb7
gi|88758660|gb|AAI13215.1| Keratin 7 [Bos taurus]
gi|296487869|tpg|DAA29982.1| TPA: keratin, type II cytoskeletal 7 [Bos taurus]
Length = 466
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+EA +++ + +MT QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 358 LEAALQKAKQDMTRQLREYQELMNVKLALDIEIATYRKLLEGEESRL 404
>gi|31873640|emb|CAD97784.1| hypothetical protein [Homo sapiens]
Length = 487
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E K E+Q E ++K A++EA +++ +
Sbjct: 333 EIADLNVRIQKLRSQILSVKSHCLKLEENIKTAEEQGELAFQDAKTKLAQLEAALQQAKQ 392
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
+M QL+ Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 393 DMARQLRKYQELMNVKLALDIEIATYRKLVEGEE 426
>gi|402883909|ref|XP_003905438.1| PREDICTED: neurofilament heavy polypeptide [Papio anubis]
Length = 1034
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 306 VNTDAMRSAQEEITEYRRQLQART---------------TELETLKSTKDSLERQRSELE 350
Query: 227 DQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ + + Q +++AE++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 351 DRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 410
>gi|281348724|gb|EFB24308.1| hypothetical protein PANDA_010509 [Ailuropoda melanoleuca]
Length = 110
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE-----------QSKFARMEAEIKRLQTEMTEQLK 255
E+N L A RLT EL+ E Q K A +EA ++R + +M QL+
Sbjct: 22 ELNRLNQAIQRLTAEPCELDRATEPPALQEEGAADSAQGKLAWLEAALQRAKHDMARQLR 81
Query: 256 DYRELMEIKINLDVEIAQYRNLMEAEES 283
+Y++LM +K+ LD EIA YR L+E EES
Sbjct: 82 EYQDLMIVKLGLDFEIATYRKLLEGEES 109
>gi|449265570|gb|EMC76748.1| Keratin, type II cytoskeletal 75 [Columba livia]
Length = 531
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 39/53 (73%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++K A +E +++ + E+ QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 406 RAKLAELETALQQAKAELARQLREYQELMNVKLALDIEIATYRKLLEGEESRL 458
>gi|119578640|gb|EAW58236.1| hypothetical protein LOC144501, isoform CRA_b [Homo sapiens]
Length = 487
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E K E+Q E ++K A++EA +++ +
Sbjct: 333 EIADLNVRIQKLRSQILSVKSHCLKLEENIKTAEEQGELAFQDAKTKLAQLEAALQQAKQ 392
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
+M QL+ Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 393 DMARQLRKYQELMNVKLALDIEIATYRKLVEGEE 426
>gi|860908|emb|CAA60679.1| vimentin [Cricetulus griseus]
Length = 380
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 24/111 (21%)
Query: 184 RKEQSSLLLELKETKGRSGKYDTEMNE------LRAANYRLTERNKELEDQIEYEQSKFA 237
R++ SL E+ KG + + +M E L AANY Q
Sbjct: 234 RRQVQSLTCEVDALKGTNESLERQMREMEENFALEAANY----------------QDTIG 277
Query: 238 RMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
R++ EI+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 278 RLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 328
>gi|47224772|emb|CAG00366.1| unnamed protein product [Tetraodon nigroviridis]
Length = 411
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELED----QIEYEQSKFARMEAEIKRLQT 248
EL E + + E+ LR AN L + E+ED ++ Q ++++ E++ L+
Sbjct: 300 ELSEFRRQLQSKTIEIETLRGANESLERQISEMEDAHNAEVAAMQDTISQLDTELRSLKG 359
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
EM + L++Y++L+ +K+ LD+EIA YR L+E EE+
Sbjct: 360 EMAQHLREYQDLLNVKMALDIEIAAYRKLLEGEETHF 396
>gi|293348974|ref|XP_001067238.2| PREDICTED: uncharacterized protein LOC315324 [Rattus norvegicus]
Length = 1013
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Query: 172 ELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEY 231
EL ++ N KE + +L++ K +++ LR N L + E Q E
Sbjct: 304 ELQESAQLQGNSMKEVQVQISQLRQV---IQKLQSQIGSLRKQNDSLQSAIADAEQQGEM 360
Query: 232 E----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
Q+K +E ++ + +M + L+DY+ELM K++LDVEIA YR L+E+EE
Sbjct: 361 ALRDAQAKLDELEGALRAAKQDMAQMLRDYQELMGTKLSLDVEIAMYRRLLESEE 415
>gi|54035279|gb|AAH39148.1| Keratin 79 [Homo sapiens]
gi|119617054|gb|EAW96648.1| keratin 6L [Homo sapiens]
Length = 535
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 181 DNLRKEQSSLLLELKETKGR-SGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
DNLR ++ + EL T R G+ D + + + E + E ++ Q K +
Sbjct: 353 DNLRDTKNEIA-ELTRTIQRLQGEADAAKKQCQQLQTAIAEAEQRGELALKDAQKKLGDL 411
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ + + + ++T L+DY+ELM +K+ LDVEIA YR L+E+EES +
Sbjct: 412 DVALHQAKEDLTRLLRDYQELMNVKLALDVEIATYRKLLESEESRM 457
>gi|39795269|gb|AAH63648.1| Keratin 79 [Homo sapiens]
Length = 535
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 181 DNLRKEQSSLLLELKETKGR-SGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
DNLR ++ + EL T R G+ D + + + E + E ++ Q K +
Sbjct: 353 DNLRDTKNEIA-ELTRTIQRLQGEADAAKKQCQQLQTAIAEAEQRGELALKDAQKKLGDL 411
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ + + + ++T L+DY+ELM +K+ LDVEIA YR L+E+EES +
Sbjct: 412 DVALHQAKEDLTRLLRDYQELMNVKLALDVEIATYRKLLESEESRM 457
>gi|417401525|gb|JAA47645.1| Putative nuclear envelope protein lamin intermediate filament
superfamily [Desmodus rotundus]
Length = 472
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 17/120 (14%)
Query: 166 LLNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKEL 225
L NT E+A R I L+ E + K + K + + E E + EL
Sbjct: 301 LRNTRNEIAEMNRAIQRLQAE-------IDNIKNQRAKLEAAIAE--------AEDHGEL 345
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++ ++K +EA ++R + +M QL++Y+ELM +K+ LDVEIA YR L+E EES L
Sbjct: 346 A--LKDARAKQEELEAALQRARQDMARQLREYQELMNVKLALDVEIATYRKLLEGEESRL 403
>gi|32567786|ref|NP_787028.1| keratin, type II cytoskeletal 79 [Homo sapiens]
gi|296434550|sp|Q5XKE5.2|K2C79_HUMAN RecName: Full=Keratin, type II cytoskeletal 79; AltName:
Full=Cytokeratin-79; Short=CK-79; AltName:
Full=Keratin-6-like; Short=Keratin-6L; AltName:
Full=Keratin-79; Short=K79; AltName: Full=Type-II
keratin Kb38
gi|27764563|tpg|DAA00403.1| TPA_exp: keratin 6l [Homo sapiens]
gi|31074633|emb|CAD91893.1| keratin 6L [Homo sapiens]
Length = 535
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 181 DNLRKEQSSLLLELKETKGR-SGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
DNLR ++ + EL T R G+ D + + + E + E ++ Q K +
Sbjct: 353 DNLRDTKNEIA-ELTRTIQRLQGEADAAKKQCQQLQTAIAEAEQRGELALKDAQKKLGDL 411
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ + + + ++T L+DY+ELM +K+ LDVEIA YR L+E+EES +
Sbjct: 412 DVALHQAKEDLTRLLRDYQELMNVKLALDVEIATYRKLLESEESRM 457
>gi|410066828|gb|AFV58056.1| vimentin, partial [Ovis aries]
Length = 388
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 231 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFSVEAANYQDTIGRLQDE 290
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 291 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 336
>gi|261363560|gb|ACX71855.1| glial fibrillary acidic protein [Gekko japonicus]
Length = 446
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
++ LR +N L + +E+ED+ ++ Q R+E + + L+ EM L++Y++L+
Sbjct: 308 CDLESLRGSNESLERQLREMEDRYAHDTASYQDTMIRLEEDTQTLKEEMARHLQEYQDLL 367
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+K+ LDVEIA YR L+E EES +
Sbjct: 368 NVKLALDVEIATYRKLLEGEESRI 391
>gi|57240090|gb|AAW49255.1| vimentin, partial [Gallus gallus]
Length = 258
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 55/91 (60%), Gaps = 8/91 (8%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
E++ L+ +N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 120 CEVDALKGSNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLL 179
Query: 262 EIKINLDVEIAQYRNLMEAEES----SLPTY 288
+K+ LD+EIA YR L+E EES +PT+
Sbjct: 180 NVKMALDIEIATYRKLLEGEESRINMPIPTF 210
>gi|431921664|gb|ELK19016.1| Keratin, type II cytoskeletal 80 [Pteropus alecto]
Length = 452
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 60/101 (59%), Gaps = 6/101 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E KE E+Q E ++K A++E + + +
Sbjct: 298 EIADLNVRIQKLRSQILSIKSHCLKLEENIKEAEEQGELAFQDAKAKLAQLEDALHQAKK 357
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPT 287
+M QL++Y+ELM K+ LD+EIA YR L+E EES LP+
Sbjct: 358 DMARQLREYQELMNTKLALDIEIATYRKLVEGEESRMDLPS 398
>gi|332839298|ref|XP_003313726.1| PREDICTED: keratin, type II cytoskeletal 79 [Pan troglodytes]
Length = 535
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 181 DNLRKEQSSLLLELKETKGR-SGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
DNLR ++ + EL T R G+ D + + + E + E ++ Q K +
Sbjct: 353 DNLRDTKNEIA-ELTRTIQRLQGEADAAKKQCQQLQTAIAEAEQRGELALKDAQKKLGDL 411
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ + + + ++T L+DY+ELM +K+ LDVEIA YR L+E+EES +
Sbjct: 412 DVALHQAKEDLTRLLRDYQELMNVKLALDVEIATYRKLLESEESRM 457
>gi|345791849|ref|XP_534795.3| PREDICTED: keratin, type II cytoskeletal 7 [Canis lupus familiaris]
Length = 489
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 381 LEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRL 427
>gi|56277601|gb|AAV85506.1| type II cytokeratin Kb40 [Mus musculus]
Length = 420
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 203 KYDTEMNELRAANYRLTERNKELEDQ----IEYEQSKFARMEAEIKRLQTEMTEQLKDYR 258
+ +++ LR N L + E Q + Q+K +EA ++ + +M + L+DY+
Sbjct: 294 RLQSQIGSLRKQNDSLQSAIADAEQQGEMAVRDAQAKLDELEAALRTAKQDMAQMLRDYQ 353
Query: 259 ELMEIKINLDVEIAQYRNLMEAEESSLPT 287
ELM K++LDVEIA YR L+E+EE + T
Sbjct: 354 ELMGTKLSLDVEIAMYRRLLESEECRIST 382
>gi|4688900|emb|CAB41416.1| sarcolectin [Homo sapiens]
Length = 469
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 357 LEAALQRAKQDMARQLREYQELMSVKLALDIEIATYRKLLEGEESRL 403
>gi|397522096|ref|XP_003831115.1| PREDICTED: keratin, type II cytoskeletal 7 [Pan paniscus]
Length = 469
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 357 LEAALQRAKQDMARQLREYQELMSVKLALDIEIATYRKLLEGEESRL 403
>gi|392349770|ref|XP_002729895.2| PREDICTED: uncharacterized protein LOC315324 [Rattus norvegicus]
Length = 958
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Query: 172 ELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEY 231
EL ++ N KE + +L++ K +++ LR N L + E Q E
Sbjct: 304 ELQESAQLQGNSMKEVQVQISQLRQV---IQKLQSQIGSLRKQNDSLQSAIADAEQQGEM 360
Query: 232 E----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
Q+K +E ++ + +M + L+DY+ELM K++LDVEIA YR L+E+EE
Sbjct: 361 ALRDAQAKLDELEGALRAAKQDMAQMLRDYQELMGTKLSLDVEIAMYRRLLESEE 415
>gi|296220633|ref|XP_002756397.1| PREDICTED: keratin, type II cytoskeletal 8-like [Callithrix
jacchus]
Length = 727
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 8/109 (7%)
Query: 181 DNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQ----IEYEQSKF 236
D+LR+ ++ E+ E + E+ L+ L ++ ED+ ++ +K
Sbjct: 542 DDLRRTKT----EISEMNRNISRLQAEIEGLKGQRASLEAAIRDAEDRGERALKDAHTKQ 597
Query: 237 ARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+E+ ++R + +M +QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 598 QELESALQRAKQDMAKQLREYQELMNVKLALDIEIATYRKLLEGEESRL 646
>gi|395834954|ref|XP_003790450.1| PREDICTED: keratin, type II cytoskeletal 80 [Otolemur garnettii]
Length = 451
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 60/101 (59%), Gaps = 6/101 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQ----IEYEQSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E K E+Q E ++K A++EA +++ +
Sbjct: 298 EIADLNVRIQKLRSQILSVKSHCLKLEENIKAAEEQGELAFEDAKAKLAQLEAALQQAKQ 357
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPT 287
+M QL+ Y+ELM K+ LD+EIA YR L+E EES LP+
Sbjct: 358 DMALQLRKYQELMNTKLALDIEIATYRKLVEGEESRMDLPS 398
>gi|311270880|ref|XP_001928806.2| PREDICTED: neurofilament heavy polypeptide [Sus scrofa]
Length = 1049
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 301 VNTDAMRSAQEEITEYRRQLQART---------------TELEALKSTKDSLERQRSELE 345
Query: 227 DQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ + + Q +++AE++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 346 DRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 405
>gi|296211721|ref|XP_002752540.1| PREDICTED: keratin, type II cytoskeletal 7 isoform 1 [Callithrix
jacchus]
Length = 471
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 357 LEAALQRAKQDMARQLREYQELMSVKLALDIEIATYRKLLEGEESRL 403
>gi|296193159|ref|XP_002744433.1| PREDICTED: keratin, type II cytoskeletal 8-like [Callithrix
jacchus]
Length = 520
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+EA ++R + +M +QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 393 LEAALQRAKQDMAKQLREYQELMNVKLALDIEIATYRKLLEGEESRL 439
>gi|76097691|gb|ABA39527.1| vimentin, partial [Sus scrofa domesticus]
Length = 297
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 179 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRVQDE 238
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 239 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 284
>gi|297691896|ref|XP_002823301.1| PREDICTED: keratin, type II cytoskeletal 7 [Pongo abelii]
Length = 469
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 357 LEAALQRAKQDMARQLREYQELMSVKLALDIEIATYRKLLEGEESRL 403
>gi|12803727|gb|AAH02700.1| Keratin 7 [Homo sapiens]
gi|24753839|gb|AAN64031.1| keratin 7 [Homo sapiens]
gi|24753853|gb|AAN64035.1| keratin 7 [Homo sapiens]
gi|60655723|gb|AAX32425.1| keratin 7 [synthetic construct]
gi|119578644|gb|EAW58240.1| keratin 7, isoform CRA_a [Homo sapiens]
gi|123990714|gb|ABM83922.1| keratin 7 [synthetic construct]
gi|123999335|gb|ABM87243.1| keratin 7 [synthetic construct]
gi|307684522|dbj|BAJ20301.1| keratin 7 [synthetic construct]
Length = 469
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 357 LEAALQRAKQDMARQLREYQELMSVKLALDIEIATYRKLLEGEESRL 403
>gi|410220070|gb|JAA07254.1| keratin 7 [Pan troglodytes]
Length = 469
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 357 LEAALQRAKQDMARQLREYQELMSVKLALDIEIATYRKLLEGEESRL 403
>gi|403297045|ref|XP_003939400.1| PREDICTED: keratin, type II cytoskeletal 79 [Saimiri boliviensis
boliviensis]
Length = 1038
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 181 DNLRKEQSSLLLELKETKGR-SGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
DNLR ++ + EL T R G+ D + + + + + E ++ ++K +
Sbjct: 856 DNLRDTKNEIA-ELTRTIQRLQGEVDAAKKQCQQLQTAIADAEQRGEMALKDAKNKLDGL 914
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E +++ + ++ LK+Y+ELM +K+ LDVEIA YR L+E EES +
Sbjct: 915 EDALQKAKQDLARLLKEYQELMNVKLALDVEIATYRKLLEGEESRM 960
Score = 43.9 bits (102), Expect = 0.086, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 247 QTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ + + L++Y+ELM +K++LDVEIA YR L+E+EE +
Sbjct: 3 KKNLAQLLREYQELMSMKLSLDVEIATYRRLLESEECRM 41
>gi|160961489|ref|NP_001104284.1| keratin, type II cytoskeletal 7 [Pan troglodytes]
gi|160011662|sp|A5A6N0.1|K2C7_PANTR RecName: Full=Keratin, type II cytoskeletal 7; AltName:
Full=Cytokeratin-7; Short=CK-7; AltName: Full=Keratin-7;
Short=K7; AltName: Full=Type-II keratin Kb7
gi|146741494|dbj|BAF62403.1| keratin 7 [Pan troglodytes verus]
Length = 469
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 357 LEAALQRAKQDMARQLREYQELMSVKLALDIEIATYRKLLEGEESRL 403
>gi|332206155|ref|XP_003252157.1| PREDICTED: keratin, type II cytoskeletal 7 [Nomascus leucogenys]
Length = 469
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 357 LEAALQRAKQDMARQLREYQELMSVKLALDIEIATYRKLLEGEESRL 403
>gi|109096745|ref|XP_001091950.1| PREDICTED: keratin, type II cytoskeletal 80 isoform 2 [Macaca
mulatta]
gi|402886064|ref|XP_003906461.1| PREDICTED: keratin, type II cytoskeletal 80 isoform 2 [Papio
anubis]
Length = 422
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 60/101 (59%), Gaps = 6/101 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E K E+Q E ++K A++EA +++ +
Sbjct: 298 EIADLNVRIQKLRSQILSVKSHCLKLEENIKAAEEQGELAFQDAKTKLAQLEAALQQAKQ 357
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPT 287
+M QL+ Y+ELM +K+ LD+EIA YR L+E EE LP+
Sbjct: 358 DMARQLRKYQELMNVKLALDIEIATYRKLVEGEEGRMDLPS 398
>gi|1200072|emb|CAA31695.1| keratin [Homo sapiens]
Length = 469
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 357 LEAALQRAKQDMARQLREYQELMSVKLALDIEIATYRKLLEGEESRL 403
>gi|213626069|gb|AAI70532.1| Lk-a protein [Xenopus laevis]
Length = 579
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
Q+K A +E +++ + +M QL++Y+ELM +K+ LDVEIA YR L+E EES +
Sbjct: 423 QTKLAELEVALQKAKQDMALQLREYQELMNVKLALDVEIATYRKLLEGEESRI 475
>gi|426372604|ref|XP_004053211.1| PREDICTED: keratin, type II cytoskeletal 7 [Gorilla gorilla
gorilla]
Length = 469
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 357 LEAALQRAKQDMARQLREYQELMSVKLALDIEIATYRKLLEGEESRL 403
>gi|410918271|ref|XP_003972609.1| PREDICTED: alpha-internexin-like [Takifugu rubripes]
Length = 480
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ LR N L ++ +++ED+ E Q A +E E++ ++EM L++Y++L+
Sbjct: 316 EIESLRGTNESLEKQLRDMEDRHNVEIGNYQDGMAELENELRTTKSEMARHLREYQDLLN 375
Query: 263 IKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EE+ + T
Sbjct: 376 VKMALDIEIAAYRKLLEGEETRIGT 400
>gi|395540625|ref|XP_003772253.1| PREDICTED: keratin, type II cytoskeletal 6A [Sarcophilus harrisii]
Length = 561
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 21/122 (17%)
Query: 166 LLNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYR--LTERNK 223
L NT E++ R+I LR E S+ + + AN + + E +
Sbjct: 367 LRNTKHEISEMNRMIQRLRAEIDSV-------------------KKQCANLQNSIAEAEQ 407
Query: 224 ELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES 283
+ E ++ ++K +EA ++R + +M QL++Y+ELM +K++LD+EIA YR L+E EE
Sbjct: 408 KGEMALKDAKAKLEDLEAALQRAKQDMARQLREYQELMNVKLSLDIEIATYRKLLEGEEC 467
Query: 284 SL 285
+
Sbjct: 468 RM 469
>gi|109096743|ref|XP_001091826.1| PREDICTED: keratin, type II cytoskeletal 80 isoform 1 [Macaca
mulatta]
gi|402886062|ref|XP_003906460.1| PREDICTED: keratin, type II cytoskeletal 80 isoform 1 [Papio
anubis]
Length = 452
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 60/101 (59%), Gaps = 6/101 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E K E+Q E ++K A++EA +++ +
Sbjct: 298 EIADLNVRIQKLRSQILSVKSHCLKLEENIKAAEEQGELAFQDAKTKLAQLEAALQQAKQ 357
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPT 287
+M QL+ Y+ELM +K+ LD+EIA YR L+E EE LP+
Sbjct: 358 DMARQLRKYQELMNVKLALDIEIATYRKLVEGEEGRMDLPS 398
>gi|47220311|emb|CAG03345.1| unnamed protein product [Tetraodon nigroviridis]
Length = 470
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ LR N L ++ +++ED+ E Q A +E E++ ++EM L++Y++L+
Sbjct: 318 EIESLRGTNESLEKQLRDMEDRHNVEIGNYQDGMAELENELRTTKSEMARHLREYQDLLN 377
Query: 263 IKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EE+ + T
Sbjct: 378 VKMALDIEIAAYRKLLEGEETRIGT 402
>gi|148222999|ref|NP_001079053.1| keratin 5, gene 5 [Xenopus laevis]
gi|13111394|dbj|BAB32829.1| larval keratin XLK [Xenopus laevis]
Length = 580
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
Q+K A +E +++ + +M QL++Y+ELM +K+ LDVEIA YR L+E EES +
Sbjct: 423 QTKLAELEVALQKAKQDMALQLREYQELMNVKLALDVEIATYRKLLEGEESRI 475
>gi|14550542|gb|AAH09521.1| Unknown (protein for IMAGE:3638955), partial [Homo sapiens]
Length = 207
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLP 286
+EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 95 LEAALQRAKQDMARQLREYQELMSVKLALDIEIATYRKLLEGEESRLA 142
>gi|4468708|emb|CAB38183.1| intermediate filament protein IF2 [Sagitta elegans]
Length = 526
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 62/101 (61%), Gaps = 6/101 (5%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM-----EAEIKRLQ 247
E+++ + + + E+ LRA N L ER LE +++ EQ+K R+ +AEI++L+
Sbjct: 355 EVRKARAKYSELQKEIMGLRAHNAALEERILALEAELD-EQAKMHRLAIDERDAEIEKLR 413
Query: 248 TEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPTY 288
++ Q+ + +ELM+ K+ LD EIA YR L++ EES L +
Sbjct: 414 AQLAAQILELKELMDSKLALDAEIATYRRLLQGEESRLKEH 454
>gi|431921640|gb|ELK18992.1| Keratin, type II cytoskeletal 78 [Pteropus alecto]
Length = 514
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 194 LKETKGRSGKYDTEMNELRAANYRLTERNKELEDQI-----------EYEQSKFARMEAE 242
+KETK + + + +L++ L ++N LE I + Q+K A +EA
Sbjct: 316 MKETKVQISQLQQAIQKLQSQIENLRKQNASLEGAITDAEQRGELALKDAQTKLAELEAA 375
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++ + M L+DY+ELM K+ LDVEIA YR L+E EE +
Sbjct: 376 LRTAKQNMARLLRDYQELMSTKLALDVEIATYRRLLEGEECRM 418
>gi|351711353|gb|EHB14272.1| Neurofilament medium polypeptide [Heterocephalus glaber]
Length = 841
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 211 LRAANYRLTERNKELEDQ-IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDV 269
+R+A + E ++L+ + IE E ++E E++ + EM L++Y++L+ +K+ LD+
Sbjct: 319 IRSAKEEIAEYRRQLQSKSIELESDTIQQLENELRGTKWEMARHLREYQDLLNVKMALDI 378
Query: 270 EIAQYRNLMEAEESSLPTY 288
EIA YR L+E EE+ T+
Sbjct: 379 EIAAYRKLLEGEETRFSTF 397
>gi|4902831|emb|CAA26956.2| put. keratin K7 [Homo sapiens]
Length = 489
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 377 LEAALQRAKQDMARQLREYQELMSVKLALDIEIATYRKLLEGEESRL 423
>gi|390467670|ref|XP_002752507.2| PREDICTED: keratin, type II cytoskeletal 8-like [Callithrix
jacchus]
Length = 482
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 38/49 (77%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+EA ++R + +M +QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 355 LEAALQRAKQDMAKQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 403
>gi|354504083|ref|XP_003514108.1| PREDICTED: keratin, type II cytoskeletal 8-like [Cricetulus
griseus]
gi|344258544|gb|EGW14648.1| Keratin, type II cytoskeletal 8 [Cricetulus griseus]
Length = 488
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 39/52 (75%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+K A++E +++ + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 356 AKLAQLETALQQAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRL 407
>gi|332832486|ref|XP_520149.3| PREDICTED: keratin, type II cytoskeletal 8-like [Pan troglodytes]
Length = 749
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+K + +EA ++R + +M QL++Y+ELM + + LD+EIA YR L+E EES L
Sbjct: 617 AKLSELEAALQRAKQDMMGQLREYQELMNVGLTLDIEIATYRKLLEGEESRL 668
>gi|426372612|ref|XP_004053215.1| PREDICTED: keratin, type II cuticular Hb4 [Gorilla gorilla gorilla]
Length = 600
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
+ N+R E + L ++ K + +L AA + E ++ E + + K A +
Sbjct: 374 LRNIRNEINELTRLIQRLKAEIEHAKAQRAKLEAA---VAEAEQQGEATLSDAKCKLADL 430
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E +++ + +M QL +Y+ELM K+ LD+EIA YR L+E EES L
Sbjct: 431 ECALQQAKQDMARQLHEYQELMNAKLGLDIEIATYRRLLEGEESRL 476
>gi|52789|emb|CAA31278.1| unnamed protein product [Mus musculus]
Length = 489
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 40/57 (70%)
Query: 229 IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
I+ Q+K A +EA ++ + +M QL++Y+ELM +K+ LD+EI YR L+E EES L
Sbjct: 351 IKDAQTKLAELEAALQPAKQDMARQLREYQELMNVKLALDIEITTYRKLLEGEESRL 407
>gi|402886058|ref|XP_003906458.1| PREDICTED: keratin, type II cytoskeletal 7 [Papio anubis]
Length = 469
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 357 LEAALQRTKQDMVRQLREYQELMSVKLALDIEIATYRKLLEGEESRL 403
>gi|15431316|ref|NP_149034.2| keratin, type II cuticular Hb4 [Homo sapiens]
gi|311033397|sp|Q9NSB2.2|KRT84_HUMAN RecName: Full=Keratin, type II cuticular Hb4; AltName:
Full=Keratin-84; Short=K84; AltName: Full=Type II hair
keratin Hb4; AltName: Full=Type-II keratin Kb24
gi|47479697|gb|AAH69647.1| Keratin 84 [Homo sapiens]
Length = 600
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
+ N+R E + L ++ K + +L AA + E ++ E + + K A +
Sbjct: 374 LRNIRNEINELTRLIQRLKAEIEHAKAQRAKLEAA---VAEAEQQGEATLSDAKCKLADL 430
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E +++ + +M QL +Y+ELM K+ LD+EIA YR L+E EES L
Sbjct: 431 ECALQQAKQDMARQLCEYQELMNAKLGLDIEIATYRRLLEGEESRL 476
>gi|332206159|ref|XP_003252159.1| PREDICTED: keratin, type II cytoskeletal 80 isoform 1 [Nomascus
leucogenys]
Length = 452
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E K E+Q E ++K A++EA +++ +
Sbjct: 298 EIADLNVRIQKLRSQILSVKSHCLKLEENIKAAEEQGELAFQDAKTKLAQLEAALQQAKQ 357
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
+M QL+ Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 358 DMARQLRKYQELMNVKLALDIEIATYRKLVEGEE 391
>gi|118151000|ref|NP_001071420.1| keratin, type II cytoskeletal 80 [Bos taurus]
gi|166218807|sp|A0JND2.1|K2C80_BOVIN RecName: Full=Keratin, type II cytoskeletal 80; AltName:
Full=Cytokeratin-80; Short=CK-80; AltName:
Full=Keratin-80; Short=K80; AltName: Full=Type-II
keratin Kb20
gi|117306302|gb|AAI26625.1| Keratin 80 [Bos taurus]
gi|151554943|gb|AAI47910.1| Keratin 80 [Bos taurus]
gi|296487858|tpg|DAA29971.1| TPA: keratin, type II cytoskeletal 80 [Bos taurus]
Length = 422
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E K E+Q E ++K A++E +++ +
Sbjct: 298 EIADLNVRIQKLRSQILSIKSHCLKLEENIKVAEEQGELAFQDAKAKLAQLEDALQQAKK 357
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M QL++Y+ELM K+ LD+EIA YR LME EES +
Sbjct: 358 DMARQLREYQELMNTKLALDIEIATYRKLMEGEESRM 394
>gi|302565286|ref|NP_001180881.1| keratin, type II cytoskeletal 7 [Macaca mulatta]
Length = 469
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 357 LEAALQRTKQDMVRQLREYQELMSVKLALDIEIATYRKLLEGEESRL 403
>gi|383411755|gb|AFH29091.1| keratin, type II cytoskeletal 7 [Macaca mulatta]
Length = 469
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 357 LEAALQRTKQDMVRQLREYQELMSVKLALDIEIATYRKLLEGEESRL 403
>gi|363745006|ref|XP_001231586.2| PREDICTED: keratin, type II cytoskeletal 75 [Gallus gallus]
Length = 550
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 22/115 (19%)
Query: 193 ELKETKGRSGKY--DT--EMNELRAANYRLTERNKELEDQIEYEQS-------------- 234
EL+ T G+ G DT E++EL RL + ++ Q E QS
Sbjct: 350 ELQATAGKHGDSLRDTKAEISELNRVIQRLRAEIENVKKQCESVQSSIADAEQRGELALK 409
Query: 235 ----KFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
K +E +K+ + ++ +QL+DY+ELM +K+ LD+EIA YR L+E EE +
Sbjct: 410 DARDKLTELETALKKAKADLAQQLRDYQELMNVKLALDIEIATYRKLLEGEECRM 464
>gi|296228169|ref|XP_002759740.1| PREDICTED: keratin, type II cytoskeletal 8-like [Callithrix
jacchus]
Length = 507
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 8/109 (7%)
Query: 181 DNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQ----IEYEQSKF 236
D+LR+ ++ E+ E + E+ L+ L ++ ED+ ++ K
Sbjct: 322 DDLRRRKT----EISEMNRNISRLQAEIEGLKGQRASLEAAIRDAEDRGERALKDAHDKQ 377
Query: 237 ARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+EA ++R + +M +QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 378 KELEAALQRAKQDMAKQLREYQELMNVKLALDIEIATYRKLLEGEESRL 426
>gi|193785954|dbj|BAG54741.1| unnamed protein product [Homo sapiens]
Length = 445
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLP 286
+EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 333 LEAALQRAKQDMARQLREYQELMSVKLALDIEIATYRKLLEGEESRLA 380
>gi|119607256|gb|EAW86850.1| hCG1988300, isoform CRA_a [Homo sapiens]
Length = 416
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E +ES L +
Sbjct: 292 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGKESRLKS 345
>gi|125628636|ref|NP_872313.2| keratin, type II cytoskeletal 80 isoform K80 [Homo sapiens]
gi|166218808|sp|Q6KB66.2|K2C80_HUMAN RecName: Full=Keratin, type II cytoskeletal 80; AltName:
Full=Cytokeratin-80; Short=CK-80; AltName:
Full=Keratin-80; Short=K80; AltName: Full=Type-II
keratin Kb20
gi|119578639|gb|EAW58235.1| hypothetical protein LOC144501, isoform CRA_a [Homo sapiens]
Length = 452
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E K E+Q E ++K A++EA +++ +
Sbjct: 298 EIADLNVRIQKLRSQILSVKSHCLKLEENIKTAEEQGELAFQDAKTKLAQLEAALQQAKQ 357
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
+M QL+ Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 358 DMARQLRKYQELMNVKLALDIEIATYRKLVEGEE 391
>gi|119607257|gb|EAW86851.1| hCG1988300, isoform CRA_b [Homo sapiens]
Length = 424
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 40/54 (74%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E +ES L +
Sbjct: 292 AKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGKESRLKS 345
>gi|395539994|ref|XP_003771947.1| PREDICTED: vimentin [Sarcophilus harrisii]
Length = 284
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 127 LRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 186
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES +LP
Sbjct: 187 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALP 232
>gi|432112624|gb|ELK35340.1| Keratin, type II cytoskeletal 80 [Myotis davidii]
Length = 452
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E KE E+Q E ++K A++E +++ +
Sbjct: 298 EIADLNVRIQKLRSQILSVKSHCLKLEENIKEAEEQGELAFQDAKAKLAQLEEALQQAKK 357
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M QL++Y+ELM K+ LD+EIA YR L+E EES +
Sbjct: 358 DMARQLREYQELMNTKLALDIEIATYRKLVEGEESRM 394
>gi|326919548|ref|XP_003206042.1| PREDICTED: keratin, type II cytoskeletal 75-like, partial
[Meleagris gallopavo]
Length = 666
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 17/120 (14%)
Query: 166 LLNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKEL 225
L NT GE++ R+I +R E ++ T+ + T + + +E EL
Sbjct: 384 LRNTKGEISELNRLIQRIRAE-------IENTRNQCATLQTAIGD--------SEERGEL 428
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++ ++K +E +++ + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 429 --ALKDAKAKMMELEDALQKAKADMARQLREYQELMNVKLALDIEIATYRKLLEGEESRL 486
>gi|47846296|emb|CAG30732.1| keratin b20 [Homo sapiens]
Length = 452
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E K E+Q E ++K A++EA +++ +
Sbjct: 298 EIADLNVRIQKLRSQILSVKSHCLKLEENIKTAEEQGELAFQDAKTKLAQLEAALQQAKQ 357
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
+M QL+ Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 358 DMARQLRKYQELMNVKLALDIEIATYRKLVEGEE 391
>gi|42760016|emb|CAF31524.1| type II hair keratin 4 [Homo sapiens]
Length = 598
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM 239
+ N+R E + L ++ K + +L AA + E ++ E + + K A +
Sbjct: 372 LRNIRNEINELTRLIQRLKAEIEHAKAQRAKLEAA---VAEAEQQGEATLSDAKCKLADL 428
Query: 240 EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E +++ + +M QL +Y+ELM K+ LD+EIA YR L+E EES L
Sbjct: 429 ECALQQAKQDMARQLCEYQELMNAKLGLDIEIATYRRLLEGEESRL 474
>gi|340234|gb|AAA61282.1| vimentin, partial [Homo sapiens]
Length = 300
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E+ E Q R++ E
Sbjct: 143 LRQAKQESTEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDE 202
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 203 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 248
>gi|403296701|ref|XP_003939236.1| PREDICTED: keratin, type II cytoskeletal 7 [Saimiri boliviensis
boliviensis]
Length = 447
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLP 286
+EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 333 LEAALQRAKQDMARQLREYQELMSVKLALDIEIATYRKLLEGEESRLA 380
>gi|350584000|ref|XP_001927214.3| PREDICTED: keratin, type II cytoskeletal 78-like [Sus scrofa]
Length = 394
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 71/130 (54%), Gaps = 17/130 (13%)
Query: 173 LANQERIIDNLRKEQSSLLLELKETKGRSGKYDT--EMNELRAA----NYRLTERNKELE 226
+A+ + ++ L++E+ +L ELK + + +Y E LR A ++ + ++N L+
Sbjct: 160 VAHLRKQLEQLQRERGALDAELKSCQDQEEEYKAKYEREALRHATLENDFVVLKKNANLQ 219
Query: 227 DQI-----------EYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYR 275
+ + Q+K +EA ++ + ++ L++Y+ELM +K+ LDVEIA YR
Sbjct: 220 AAVADAEHRGELALKDAQAKLVELEAALRTAKQDLARLLREYQELMSLKLALDVEIATYR 279
Query: 276 NLMEAEESSL 285
L+E EES +
Sbjct: 280 RLLEGEESRM 289
>gi|94730353|sp|P46660.2|AINX_MOUSE RecName: Full=Alpha-internexin; Short=Alpha-Inx; AltName: Full=66
kDa neurofilament protein; Short=NF-66;
Short=Neurofilament-66
Length = 504
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ LR AN L + ELE++ E Q ++E++++ ++EM L++Y++L+
Sbjct: 325 EIEGLRGANESLERQILELEERHSAEVAGYQDSIGQLESDLRNTKSEMARHLREYQDLLN 384
Query: 263 IKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EE+ T
Sbjct: 385 VKMALDIEIAAYRKLLEGEETRFST 409
>gi|125628632|ref|NP_001074961.1| keratin, type II cytoskeletal 80 isoform K80.1 [Homo sapiens]
gi|40807176|gb|AAH65180.1| Keratin 80 [Homo sapiens]
gi|119578641|gb|EAW58237.1| hypothetical protein LOC144501, isoform CRA_c [Homo sapiens]
gi|312152818|gb|ADQ32921.1| keratin 80 [synthetic construct]
Length = 422
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E K E+Q E ++K A++EA +++ +
Sbjct: 298 EIADLNVRIQKLRSQILSVKSHCLKLEENIKTAEEQGELAFQDAKTKLAQLEAALQQAKQ 357
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
+M QL+ Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 358 DMARQLRKYQELMNVKLALDIEIATYRKLVEGEE 391
>gi|148539957|ref|NP_666212.3| alpha-internexin [Mus musculus]
gi|17390900|gb|AAH18383.1| Ina protein [Mus musculus]
Length = 501
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ LR AN L + ELE++ E Q ++E++++ ++EM L++Y++L+
Sbjct: 325 EIEGLRGANESLERQILELEERHSAEVAGYQDSIGQLESDLRNTKSEMARHLREYQDLLN 384
Query: 263 IKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EE+ T
Sbjct: 385 VKMALDIEIAAYRKLLEGEETRFST 409
>gi|26348034|dbj|BAC37665.1| unnamed protein product [Mus musculus]
Length = 413
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQT 248
EL E++ R ++++ L+ + ER +ELED + E+ RM E E+ ++
Sbjct: 293 ELMESRMRIESLSSQLSNLQKESRACLERIQELEDMLAKERDNSRRMLSDREREMAEIRD 352
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+M +QL DY +L+++K+ LD+EI+ YR L+E EE L
Sbjct: 353 QMQQQLSDYEQLLDVKLALDMEISAYRKLLEGEEERL 389
>gi|148710076|gb|EDL42022.1| internexin neuronal intermediate filament protein, alpha [Mus
musculus]
Length = 448
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ LR AN L + ELE++ E Q ++E++++ ++EM L++Y++L+
Sbjct: 272 EIEGLRGANESLERQILELEERHSAEVAGYQDSIGQLESDLRNTKSEMARHLREYQDLLN 331
Query: 263 IKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EE+ T
Sbjct: 332 VKMALDIEIAAYRKLLEGEETRFST 356
>gi|432098416|gb|ELK28215.1| Neurofilament medium polypeptide [Myotis davidii]
Length = 845
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 211 LRAANYRLTERNKELEDQ-IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDV 269
+R+A + E ++L+ + IE E ++E E++ + EM L++Y++L+ +K+ LD+
Sbjct: 310 IRSAKEEIAEYRRQLQSKSIELESDTIQQLENELRGTKWEMARHLREYQDLLNVKMALDI 369
Query: 270 EIAQYRNLMEAEESSLPTY 288
EIA YR L+E EE+ T+
Sbjct: 370 EIAAYRKLLEGEETRFSTF 388
>gi|397522100|ref|XP_003831117.1| PREDICTED: keratin, type II cytoskeletal 80 isoform 2 [Pan
paniscus]
Length = 422
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E K E+Q E ++K A++EA +++ +
Sbjct: 298 EIADLNVRIQKLRSQILSVKSHCLKLEENIKTAEEQGELAFQDAKTKLAQLEAALQQAKQ 357
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
+M QL+ Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 358 DMARQLRKYQELMNVKLALDIEIATYRKLVEGEE 391
>gi|327264445|ref|XP_003217024.1| PREDICTED: keratin, type II cytoskeletal cochleal-like isoform 2
[Anolis carolinensis]
Length = 480
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEI 263
Y T+ +L AA +TE + E ++ ++K +E + + + EM QL++Y+ELM +
Sbjct: 318 YQTKRGKLEAA---ITEAEERGELAVKDARAKLQELENALNKAKQEMARQLREYQELMNV 374
Query: 264 KINLDVEIAQYRNLMEAEESSLP 286
K++LD+EIA YR L+E EES L
Sbjct: 375 KMSLDIEIATYRKLLEGEESRLA 397
>gi|397522098|ref|XP_003831116.1| PREDICTED: keratin, type II cytoskeletal 80 isoform 1 [Pan
paniscus]
Length = 452
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E K E+Q E ++K A++EA +++ +
Sbjct: 298 EIADLNVRIQKLRSQILSVKSHCLKLEENIKTAEEQGELAFQDAKTKLAQLEAALQQAKQ 357
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
+M QL+ Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 358 DMARQLRKYQELMNVKLALDIEIATYRKLVEGEE 391
>gi|332206161|ref|XP_003252160.1| PREDICTED: keratin, type II cytoskeletal 80 isoform 2 [Nomascus
leucogenys]
Length = 422
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E K E+Q E ++K A++EA +++ +
Sbjct: 298 EIADLNVRIQKLRSQILSVKSHCLKLEENIKAAEEQGELAFQDAKTKLAQLEAALQQAKQ 357
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
+M QL+ Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 358 DMARQLRKYQELMNVKLALDIEIATYRKLVEGEE 391
>gi|380804891|gb|AFE74321.1| neurofilament heavy polypeptide, partial [Macaca mulatta]
Length = 236
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 19/123 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 107 VNTDAMRSAQEEITEYRRQLQAR---------------TTELETLKSTKDSLERQRSELE 151
Query: 227 DQ----IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ I Q +++AE++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 152 DRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 211
Query: 283 SSL 285
+
Sbjct: 212 CRI 214
>gi|114644598|ref|XP_509076.2| PREDICTED: keratin, type II cytoskeletal 80 [Pan troglodytes]
Length = 422
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E K E+Q E ++K A++EA +++ +
Sbjct: 298 EIADLNVRIQKLRSQILSVKSHCLKLEENIKTAEEQGELAFQDAKTKLAQLEAALQQAKQ 357
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
+M QL+ Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 358 DMARQLRKYQELMNVKLALDIEIATYRKLVEGEE 391
>gi|432112596|gb|ELK35312.1| Keratin, type II cytoskeletal 4 [Myotis davidii]
Length = 524
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+SK A +EA +K+ + E+T L++Y+ELM +K+ LD+EIA YR L+E EE +
Sbjct: 405 RSKRAELEAALKKAKEELTRMLREYQELMSVKLALDIEIATYRKLLEGEECRM 457
>gi|354504779|ref|XP_003514451.1| PREDICTED: keratin, type II cuticular Hb4 [Cricetulus griseus]
gi|344249344|gb|EGW05448.1| Keratin, type II cuticular Hb4 [Cricetulus griseus]
Length = 602
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 180 IDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSK 235
DNLR + E+ E + TE+ +A +L E E Q E + K
Sbjct: 377 CDNLRNTRD----EINELTRLIQRLKTEIEHSKAQCAKLEAAVAEAEQQGEAALNDAKCK 432
Query: 236 FARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
A +E +++ + +M QL++Y+ELM K+ LD+EIA YR L+E EE
Sbjct: 433 LADLEGALQQAKQDMARQLREYQELMNAKLGLDIEIATYRQLLEGEE 479
>gi|149040328|gb|EDL94366.1| internexin, alpha [Rattus norvegicus]
Length = 506
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ LR AN L + ELE++ E Q ++E++++ ++EM L++Y++L+
Sbjct: 325 EIEGLRGANESLERQILELEERHSAEVAGYQDSIGQLESDLRNTKSEMARHLREYQDLLN 384
Query: 263 IKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EE+ T
Sbjct: 385 VKMALDIEIAAYRKLLEGEETRFST 409
>gi|158341642|ref|NP_036739.2| neurofilament heavy polypeptide [Rattus norvegicus]
Length = 1064
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 19/120 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 306 VNTDAMRSAQEEITEYRRQLQA---------------RTTELEALKSTKESLERQRSELE 350
Query: 227 DQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ + + Q +++ E++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 351 DRHQVDMASYQDAIQQLDNELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 410
>gi|5030431|gb|AAA61281.2| vimentin [Homo sapiens]
Length = 354
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 61/106 (57%), Gaps = 13/106 (12%)
Query: 194 LKETKGRSGKY-------DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAE 242
L++ K S +Y E++ L+ N L + +E+E++ E Q R++ E
Sbjct: 197 LRQAKQESTEYRRQVQSLTCEVDALKGTNECLERQMREMEEKFAVEAANYQDTIGRLQDE 256
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLP 286
I+ ++ EM L++Y++L+ +K+ LD+EIA YR L+E EES SLP
Sbjct: 257 IQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLP 302
>gi|426372608|ref|XP_004053213.1| PREDICTED: keratin, type II cytoskeletal 80 isoform 2 [Gorilla
gorilla gorilla]
Length = 422
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEY----EQSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E K E+Q E ++K A++EA +++ +
Sbjct: 298 EITDLNVRIQKLRSQILSVKSHCLKLEENIKTAEEQGELTFQDAKTKLAQLEAALQQAKQ 357
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
+M QL+ Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 358 DMARQLRKYQELMNVKLALDIEIATYRKLVEGEE 391
>gi|449488687|ref|XP_004175950.1| PREDICTED: keratin, type II cytoskeletal 4-like [Taeniopygia
guttata]
Length = 555
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 37/51 (72%)
Query: 235 KFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
K A +E +++ +T+M QL++Y++LM +K+ LDVEIA YR L+E EE +
Sbjct: 411 KLAELETALQKAKTDMARQLREYQDLMNVKLALDVEIATYRKLLEGEECRM 461
>gi|444521920|gb|ELV13241.1| Keratin, type II cytoskeletal 7 [Tupaia chinensis]
Length = 463
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 17/121 (14%)
Query: 166 LLNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKEL 225
L NT E+A R I L+ E + K + K L AA +TE +
Sbjct: 299 LRNTRNEIAEMNRAIQRLQAE-------INNVKNQCAK-------LEAA---ITEAEERG 341
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E ++ ++K +EA ++R + +M QL++Y+ELM K+ LD+EIA YR L+E EES L
Sbjct: 342 ELALKDARAKQKELEAALQRAKQDMARQLREYQELMNTKLALDIEIATYRKLLEGEESRL 401
Query: 286 P 286
Sbjct: 402 A 402
>gi|9506811|ref|NP_062001.1| alpha-internexin [Rattus norvegicus]
gi|1703221|sp|P23565.2|AINX_RAT RecName: Full=Alpha-internexin; Short=Alpha-Inx
gi|204964|gb|AAA41444.1| alpha-internexin [Rattus norvegicus]
Length = 505
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ LR AN L + ELE++ E Q ++E++++ ++EM L++Y++L+
Sbjct: 325 EIEGLRGANESLERQILELEERHSAEVAGYQDSIGQLESDLRNTKSEMARHLREYQDLLN 384
Query: 263 IKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EE+ T
Sbjct: 385 VKMALDIEIAAYRKLLEGEETRFST 409
>gi|297691892|ref|XP_002823299.1| PREDICTED: keratin, type II cytoskeletal 80 isoform 1 [Pongo
abelii]
Length = 452
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 25/115 (21%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQI----------------------- 229
+L+E RS +Y + + R+ L R ++L QI
Sbjct: 277 QLEEQAARSAEYGSSLQSSRSEIADLNVRIQKLRSQILSVKSHCLKLEENIQTAEEQGEL 336
Query: 230 --EYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
+ ++K A++EA +++ + +M +QL+ Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 337 AFQDAKTKLAQLEAALQQAKQDMAQQLRKYQELMNVKLALDIEIATYRKLVEGEE 391
>gi|348580105|ref|XP_003475819.1| PREDICTED: keratin, type II cytoskeletal 80 [Cavia porcellus]
Length = 455
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 61/102 (59%), Gaps = 6/102 (5%)
Query: 192 LELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQ 247
E+ + R K +++ +++ +L E K E+Q E ++K A++E +++ +
Sbjct: 297 CEIADLNVRIQKLRSQIVSIKSHCLKLEESIKAAEEQGELAFQDAKAKLAQLEEALQKAK 356
Query: 248 TEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPT 287
+M QL++Y+ELM +K+ LD+EIA YR L+E EE+ LP+
Sbjct: 357 QDMARQLREYQELMNVKLALDIEIATYRKLVEGEENRMDLPS 398
>gi|326919553|ref|XP_003206044.1| PREDICTED: keratin, type II cytoskeletal 75-like [Meleagris
gallopavo]
Length = 536
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 37/51 (72%)
Query: 235 KFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
K A +EA +++ + ++ QL++Y+ELM +K+ LD+EIA YR L+E EE L
Sbjct: 407 KLAELEAALQQAKADLARQLREYQELMNVKLALDIEIATYRKLLEGEECRL 457
>gi|431921661|gb|ELK19013.1| Keratin, type II cuticular Hb1 [Pteropus alecto]
Length = 199
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES 283
+ K A +EA +++ + +M QL++Y+ELM +K+ LD EIA YR L+E+EES
Sbjct: 99 KGKLAWLEAALQKAKQDMVRQLREYQELMIVKLGLDFEIATYRKLLESEES 149
>gi|426372606|ref|XP_004053212.1| PREDICTED: keratin, type II cytoskeletal 80 isoform 1 [Gorilla
gorilla gorilla]
Length = 452
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEY----EQSKFARMEAEIKRLQT 248
E+ + R K +++ +++ +L E K E+Q E ++K A++EA +++ +
Sbjct: 298 EITDLNVRIQKLRSQILSVKSHCLKLEENIKTAEEQGELTFQDAKTKLAQLEAALQQAKQ 357
Query: 249 EMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
+M QL+ Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 358 DMARQLRKYQELMNVKLALDIEIATYRKLVEGEE 391
>gi|2642598|gb|AAB87068.1| high molecular-weight neurofilament [Rattus norvegicus]
Length = 1072
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 19/120 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 302 VNTDAMRSAQEEITEYRRQLQA---------------RTTELEALKSTKESLERQRSELE 346
Query: 227 DQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ + + Q +++ E++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 347 DRHQVDMASYQDAIQQLDNELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 406
>gi|46485132|tpg|DAA04931.1| TPA_exp: type II keratin Kb40 [Rattus norvegicus]
Length = 488
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 203 KYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYR 258
K +++ LR N L + E Q E Q+K +E ++ + +M + L+DY+
Sbjct: 332 KLQSQIGSLRKQNDSLQSAIADAEQQGEMALRDAQAKLDELEGALRAAKQDMAQMLRDYQ 391
Query: 259 ELMEIKINLDVEIAQYRNLMEAEESSL 285
ELM K++LDVEIA YR L+E+EE +
Sbjct: 392 ELMGTKLSLDVEIAMYRRLLESEECRI 418
>gi|297691894|ref|XP_002823300.1| PREDICTED: keratin, type II cytoskeletal 80 isoform 2 [Pongo
abelii]
Length = 422
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 25/115 (21%)
Query: 193 ELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQI----------------------- 229
+L+E RS +Y + + R+ L R ++L QI
Sbjct: 277 QLEEQAARSAEYGSSLQSSRSEIADLNVRIQKLRSQILSVKSHCLKLEENIQTAEEQGEL 336
Query: 230 --EYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
+ ++K A++EA +++ + +M +QL+ Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 337 AFQDAKTKLAQLEAALQQAKQDMAQQLRKYQELMNVKLALDIEIATYRKLVEGEE 391
>gi|47575885|ref|NP_001001195.1| keratin, type II cytoskeletal 5 [Gallus gallus]
gi|46399073|gb|AAS92198.1| type II alpha-keratin IIA [Gallus gallus]
Length = 599
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 39/54 (72%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLP 286
+SK A +E +++ + ++ QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 435 KSKLAELEDALQKAKADLARQLREYQELMNVKLALDIEIATYRKLLEGEESRLA 488
>gi|390468451|ref|XP_002753283.2| PREDICTED: keratin, type II cytoskeletal 8-like [Callithrix
jacchus]
Length = 482
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 38/49 (77%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+EA ++R + +M +QL++Y+ELM +K+ LD+EIA YR L+E EES L +
Sbjct: 355 LEAALQRAKQDMAKQLREYQELMNVKLALDIEIATYRKLLEGEESRLES 403
>gi|431921663|gb|ELK19015.1| Keratin, type II cytoskeletal 7 [Pteropus alecto]
Length = 462
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 17/120 (14%)
Query: 166 LLNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKEL 225
L NT E+A R I L+ E + K + K ++ + E E + EL
Sbjct: 298 LRNTRNEIAEMNRAIQRLQAE-------IDNIKNQRAKLESAIAE--------AEEHGEL 342
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++ ++K +EA ++R + +M QL++Y+EL+ IK+ LD+EIA YR L+E EES L
Sbjct: 343 A--LKDARAKQEELEAALQRAKQDMARQLREYQELLNIKLALDIEIATYRKLLEGEESRL 400
>gi|426247474|ref|XP_004017510.1| PREDICTED: LOW QUALITY PROTEIN: neurofilament heavy polypeptide
[Ovis aries]
Length = 942
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 167 LNTDGELANQERIIDNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELE 226
+NTD + QE I + R+ Q+ TE+ L++ L + ELE
Sbjct: 258 VNTDAMRSAQEEISEYRRQLQART---------------TELETLKSTKDSLERQRSELE 302
Query: 227 DQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
D+ + + Q +++AE++ + EM QL++Y++L+ +K+ LD+EIA YR L+E EE
Sbjct: 303 DRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEE 362
>gi|74201379|dbj|BAE26134.1| unnamed protein product [Mus musculus]
Length = 335
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ LR AN L + ELE++ E Q ++E++++ ++EM L++Y++L+
Sbjct: 159 EIEGLRGANESLERQILELEERHSAEVAGYQDSIGQLESDLRNTKSEMARHLREYQDLLN 218
Query: 263 IKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EE+ T
Sbjct: 219 VKMALDIEIAAYRKLLEGEETRFST 243
>gi|354504528|ref|XP_003514326.1| PREDICTED: keratin, type II cytoskeletal 80-like [Cricetulus
griseus]
gi|344257560|gb|EGW13664.1| Keratin, type II cytoskeletal 80 [Cricetulus griseus]
Length = 452
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 60/102 (58%), Gaps = 6/102 (5%)
Query: 192 LELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQ 247
E+ + R K +++ +++ +L E K E+Q E + K A++EA +++ +
Sbjct: 297 CEIADLNVRIQKLRSQILSIKSHCLKLEENIKVAEEQGELAFQDAKDKLAQLEAALQKAK 356
Query: 248 TEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEES--SLPT 287
+M QL++Y++LM K+ LD+EIA YR L+E EES LP+
Sbjct: 357 QDMARQLREYQDLMNTKLALDIEIATYRKLVEGEESRMDLPS 398
>gi|55622|emb|CAA36264.1| alpha-internexin [Rattus norvegicus]
Length = 500
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ LR AN L + ELE++ E Q ++E++++ ++EM L++Y++L+
Sbjct: 321 EIEGLRGANESLERQILELEERHSAEVAGYQDSIGQLESDLRNTKSEMARHLREYQDLLN 380
Query: 263 IKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EE+ T
Sbjct: 381 VKMALDIEIAAYRKLLEGEETRFST 405
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.309 0.127 0.339
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,246,034,036
Number of Sequences: 23463169
Number of extensions: 173945531
Number of successful extensions: 762666
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5271
Number of HSP's successfully gapped in prelim test: 4635
Number of HSP's that attempted gapping in prelim test: 732631
Number of HSP's gapped (non-prelim): 33810
length of query: 288
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 147
effective length of database: 9,050,888,538
effective search space: 1330480615086
effective search space used: 1330480615086
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 76 (33.9 bits)