Your job contains 1 sequence.
>psy21
MGVVFETRIEEVQKKRKTELLCMNVSGAGSSSVAGTPSRGSVAPSKKRKLNILEEYESEE
RTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFH
RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGELANQERII
DNLRKEQSSLLLELKETKGRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARME
AEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSLPTY
The BLAST search returned 9 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy21
(288 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0002525 - symbol:Lam "Lamin" species:7227 "Drosoph... 365 5.9e-33 1
FB|FBgn0010397 - symbol:LamC "Lamin C" species:7227 "Dros... 284 4.2e-24 1
UNIPROTKB|P14731 - symbol:LMNB1 "Lamin-B1" species:9031 "... 252 1.5e-22 2
UNIPROTKB|F1PBK4 - symbol:LMNB1 "Uncharacterized protein"... 251 6.3e-21 1
UNIPROTKB|J9P3G1 - symbol:LMNB1 "Uncharacterized protein"... 251 7.5e-21 1
UNIPROTKB|F1NAM2 - symbol:LMNB1 "Lamin-B1" species:9031 "... 252 1.1e-20 1
UNIPROTKB|F1NR20 - symbol:LMNB1 "Lamin-B1" species:9031 "... 252 1.1e-20 1
MGI|MGI:96795 - symbol:Lmnb1 "lamin B1" species:10090 "Mu... 252 1.1e-20 1
UNIPROTKB|F1PBJ3 - symbol:LMNA "Uncharacterized protein" ... 253 1.1e-20 1
UNIPROTKB|P20700 - symbol:LMNB1 "Lamin-B1" species:9606 "... 251 1.4e-20 1
UNIPROTKB|F1RKM0 - symbol:LMNB1 "Uncharacterized protein"... 251 1.4e-20 1
RGD|620522 - symbol:Lmnb1 "lamin B1" species:10116 "Rattu... 251 1.4e-20 1
UNIPROTKB|P70615 - symbol:Lmnb1 "Lamin-B1" species:10116 ... 251 1.4e-20 1
UNIPROTKB|J9NSW5 - symbol:LMNA "Uncharacterized protein" ... 253 1.4e-20 1
RGD|1563803 - symbol:Lmnb2 "lamin B2" species:10116 "Ratt... 236 2.4e-20 2
UNIPROTKB|F1RLQ2 - symbol:LMNA "Prelamin-A/C" species:982... 248 3.8e-20 1
UNIPROTKB|Q3ZD69 - symbol:LMNA "Prelamin-A/C" species:982... 248 3.8e-20 1
UNIPROTKB|P13648 - symbol:LMNA "Lamin-A" species:9031 "Ga... 245 7.8e-20 1
UNIPROTKB|E9PSR1 - symbol:Lmna "Prelamin-A/C" species:101... 240 9.5e-20 1
UNIPROTKB|G3V8M3 - symbol:Lmna "Lamin A, isoform CRA_c" s... 240 1.1e-19 1
ZFIN|ZDB-GENE-020424-3 - symbol:lmna "lamin A" species:79... 243 1.3e-19 1
UNIPROTKB|Q5TCI8 - symbol:LMNA "Prelamin-A/C" species:960... 240 1.3e-19 1
UNIPROTKB|D6RAQ3 - symbol:LMNA "Prelamin-A/C" species:960... 240 2.0e-19 1
MGI|MGI:96794 - symbol:Lmna "lamin A" species:10090 "Mus ... 241 2.2e-19 1
UNIPROTKB|Q6UYC3 - symbol:LMNA "Progerin" species:9606 "H... 240 2.4e-19 1
UNIPROTKB|D4A4U0 - symbol:Lmna "Prelamin-A/C" species:101... 240 2.6e-19 1
UNIPROTKB|P02545 - symbol:LMNA "Prelamin-A/C" species:960... 240 2.8e-19 1
RGD|620456 - symbol:Lmna "lamin A/C" species:10116 "Rattu... 240 2.8e-19 1
UNIPROTKB|G3V8L3 - symbol:Lmna "Lamin A, isoform CRA_b" s... 240 2.8e-19 1
UNIPROTKB|F1MYG5 - symbol:LMNA "Uncharacterized protein" ... 238 4.5e-19 1
UNIPROTKB|F1NP51 - symbol:LMNB2 "Lamin-B2" species:9031 "... 236 6.1e-19 1
UNIPROTKB|P14732 - symbol:LMNB2 "Lamin-B2" species:9031 "... 236 6.1e-19 1
UNIPROTKB|F1NVW0 - symbol:LMNB2 "Lamin-B2" species:9031 "... 236 6.4e-19 1
MGI|MGI:96796 - symbol:Lmnb2 "lamin B2" species:10090 "Mu... 233 1.3e-18 1
UNIPROTKB|F1MJI7 - symbol:LMNB2 "Uncharacterized protein"... 233 1.3e-18 1
UNIPROTKB|I3LC25 - symbol:LMNB2 "Uncharacterized protein"... 233 1.4e-18 1
UNIPROTKB|Q03252 - symbol:LMNB2 "Lamin-B2" species:9606 "... 230 2.7e-18 1
UNIPROTKB|J9JID7 - symbol:LMNB2 "Lamin B2, isoform CRA_a"... 230 2.9e-18 1
UNIPROTKB|F1Q1E1 - symbol:LMNB2 "Uncharacterized protein"... 228 3.5e-18 1
ZFIN|ZDB-GENE-020424-2 - symbol:lmnb1 "lamin B1" species:... 225 9.5e-18 1
ZFIN|ZDB-GENE-990630-13 - symbol:lmnb2 "lamin B2" species... 217 6.4e-17 1
UNIPROTKB|H7C5W5 - symbol:PRPH "Peripherin" species:9606 ... 169 9.1e-13 1
WB|WBGene00003052 - symbol:lmn-1 species:6239 "Caenorhabd... 186 1.1e-12 1
UNIPROTKB|Q21443 - symbol:lmn-1 "Lamin-1" species:6239 "C... 186 1.1e-12 1
WB|WBGene00002050 - symbol:ifa-1 species:6239 "Caenorhabd... 186 1.2e-12 1
WB|WBGene00002052 - symbol:ifa-4 species:6239 "Caenorhabd... 182 5.3e-12 1
UNIPROTKB|H9KZP4 - symbol:LOC426897 "Uncharacterized prot... 130 2.8e-11 2
UNIPROTKB|F1N8X2 - symbol:LOC415464 "Uncharacterized prot... 177 2.8e-11 1
UNIPROTKB|E1B8N6 - symbol:LMNB1 "Uncharacterized protein"... 176 3.8e-11 1
UNIPROTKB|P17661 - symbol:DES "Desmin" species:9606 "Homo... 172 8.4e-11 1
UNIPROTKB|Q8N9Z9 - symbol:IFLTD1 "Intermediate filament t... 170 1.0e-10 1
MGI|MGI:94885 - symbol:Des "desmin" species:10090 "Mus mu... 171 1.2e-10 1
RGD|620686 - symbol:Des "desmin" species:10116 "Rattus no... 171 1.2e-10 1
UNIPROTKB|Q6P725 - symbol:Des "Desmin" species:10116 "Rat... 171 1.2e-10 1
UNIPROTKB|O62654 - symbol:DES "Desmin" species:9913 "Bos ... 171 1.2e-10 1
UNIPROTKB|P02540 - symbol:DES "Desmin" species:9823 "Sus ... 171 1.2e-10 1
UNIPROTKB|I3L7H4 - symbol:IFLTD1 "Uncharacterized protein... 170 1.2e-10 1
UNIPROTKB|F1PGH6 - symbol:PRPH "Uncharacterized protein" ... 169 1.4e-10 2
UNIPROTKB|A6QQJ3 - symbol:PRPH "Peripherin" species:9913 ... 169 1.4e-10 2
UNIPROTKB|P41219 - symbol:PRPH "Peripherin" species:9606 ... 169 1.4e-10 2
UNIPROTKB|Q5XFN2 - symbol:DES "Desmin" species:9615 "Cani... 170 1.5e-10 1
ZFIN|ZDB-GENE-980526-221 - symbol:desma "desmin a" specie... 170 1.6e-10 1
RGD|3414 - symbol:Prph "peripherin" species:10116 "Rattus... 169 2.0e-10 1
UNIPROTKB|F1M7P4 - symbol:Prph "Peripherin" species:10116... 169 2.1e-10 1
MGI|MGI:97774 - symbol:Prph "peripherin" species:10090 "M... 169 2.1e-10 1
UNIPROTKB|F1SHC0 - symbol:PRPH "Uncharacterized protein" ... 166 3.2e-10 1
RGD|1560077 - symbol:Ifltd1 "intermediate filament tail d... 166 3.7e-10 1
MGI|MGI:1921321 - symbol:Ifltd1 "intermediate filament ta... 166 3.7e-10 1
WB|WBGene00002053 - symbol:ifb-1 species:6239 "Caenorhabd... 168 4.2e-10 1
UNIPROTKB|Q19289 - symbol:ifb-1 "Intermediate filament pr... 168 4.2e-10 1
WB|WBGene00002051 - symbol:ifa-3 species:6239 "Caenorhabd... 167 5.4e-10 1
UNIPROTKB|J9NUP2 - symbol:IFLTD1 "Uncharacterized protein... 162 7.1e-10 1
ZFIN|ZDB-GENE-061027-102 - symbol:desmb "desmin b" specie... 164 8.8e-10 1
UNIPROTKB|E2QX11 - symbol:IFLTD1 "Uncharacterized protein... 162 1.2e-09 1
UNIPROTKB|P02542 - symbol:DES "Desmin" species:9031 "Gall... 162 1.5e-09 1
WB|WBGene00017327 - symbol:F10C1.8 species:6239 "Caenorha... 141 1.7e-09 1
UNIPROTKB|F1PRC4 - symbol:LOC608165 "Uncharacterized prot... 138 3.8e-09 1
ZFIN|ZDB-GENE-990415-207 - symbol:prph "peripherin" speci... 157 4.0e-09 2
WB|WBGene00002054 - symbol:ifb-2 species:6239 "Caenorhabd... 159 4.6e-09 1
UNIPROTKB|Q19286 - symbol:ifb-2 "Intermediate filament pr... 159 4.6e-09 1
ZFIN|ZDB-GENE-990914-3 - symbol:gfap "glial fibrillary ac... 157 5.7e-09 1
UNIPROTKB|F1MRA0 - symbol:IFLTD1 "Uncharacterized protein... 156 6.0e-09 1
WB|WBGene00003485 - symbol:mua-6 species:6239 "Caenorhabd... 157 9.0e-09 1
UNIPROTKB|B0YJC5 - symbol:VIM "Vimentin" species:9606 "Ho... 147 1.0e-08 1
UNIPROTKB|H9KZP2 - symbol:KRT8 "Uncharacterized protein" ... 134 1.1e-08 1
UNIPROTKB|Q49MC0 - symbol:vimentin "Vimentin" species:903... 149 1.2e-08 1
UNIPROTKB|P08776 - symbol:P08776 "Keratin, type II cytosk... 155 1.2e-08 1
ZFIN|ZDB-GENE-040426-1743 - symbol:viml "vimentin like" s... 153 1.7e-08 1
ZFIN|ZDB-GENE-011212-3 - symbol:vim "vimentin" species:79... 153 1.8e-08 1
UNIPROTKB|P07196 - symbol:NEFL "Neurofilament light polyp... 154 1.8e-08 1
UNIPROTKB|P48616 - symbol:VIM "Vimentin" species:9913 "Bo... 152 2.4e-08 1
UNIPROTKB|B0YJC4 - symbol:VIM "Vimentin" species:9606 "Ho... 151 2.8e-08 1
UNIPROTKB|P48670 - symbol:VIM "Vimentin" species:10029 "C... 151 3.0e-08 1
UNIPROTKB|P08670 - symbol:VIM "Vimentin" species:9606 "Ho... 151 3.2e-08 1
UNIPROTKB|P02543 - symbol:VIM "Vimentin" species:9823 "Su... 151 3.2e-08 1
UNIPROTKB|P84198 - symbol:VIM "Vimentin" species:9534 "Ch... 151 3.2e-08 1
MGI|MGI:98932 - symbol:Vim "vimentin" species:10090 "Mus ... 151 3.2e-08 1
RGD|621646 - symbol:Vim "vimentin" species:10116 "Rattus ... 151 3.2e-08 1
UNIPROTKB|F1NFH3 - symbol:VIM "Vimentin" species:9031 "Ga... 149 3.6e-08 1
UNIPROTKB|P02544 - symbol:VIM "Vimentin" species:10036 "M... 151 3.7e-08 2
WARNING: Descriptions of 284 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0002525 [details] [associations]
symbol:Lam "Lamin" species:7227 "Drosophila melanogaster"
[GO:0005638 "lamin filament" evidence=IDA;TAS] [GO:0007084 "mitotic
nuclear envelope reassembly" evidence=IDA] [GO:0007430 "terminal
branching, open tracheal system" evidence=IMP] [GO:0005652 "nuclear
lamina" evidence=IDA] [GO:0031081 "nuclear pore distribution"
evidence=IMP] [GO:0006998 "nuclear envelope organization"
evidence=IMP] [GO:0005198 "structural molecule activity"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007097 "nuclear migration"
evidence=IMP] [GO:0090435 "protein localization to nuclear
envelope" evidence=IMP] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0071763 "nuclear membrane organization"
evidence=IDA] [GO:0035262 "gonad morphogenesis" evidence=IMP]
[GO:0048546 "digestive tract morphogenesis" evidence=IMP]
[GO:0001745 "compound eye morphogenesis" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0040003
"chitin-based cuticle development" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IDA;IMP] [GO:0051297 "centrosome organization"
evidence=IMP] [GO:0072686 "mitotic spindle" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0046331 "lateral
inhibition" evidence=IMP] [GO:0007569 "cell aging" evidence=IMP]
[GO:0008344 "adult locomotory behavior" evidence=IMP]
InterPro:IPR001664 GO:GO:0005635 GO:GO:0005813 GO:GO:0005875
EMBL:AE014134 GO:GO:0051297 GO:GO:0005811 GO:GO:0005198
GO:GO:0007417 GO:GO:0046331 GO:GO:0006342 InterPro:IPR016044
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0040003
GO:GO:0007084 GO:GO:0007097 GO:GO:0072686 GO:GO:0048546
GO:GO:0035262 GO:GO:0007430 InterPro:IPR001322 Pfam:PF00932
GO:GO:0001745 GO:GO:0031081 GO:GO:0005638 eggNOG:NOG325506
GeneTree:ENSGT00560000076873 EMBL:X07278 EMBL:X16275 EMBL:BT001506
PIR:A29965 PIR:A37103 RefSeq:NP_001245892.1 RefSeq:NP_001245893.1
RefSeq:NP_476616.1 UniGene:Dm.312 ProteinModelPortal:P08928
SMR:P08928 DIP:DIP-2663N IntAct:P08928 MINT:MINT-853541
STRING:P08928 PaxDb:P08928 EnsemblMetazoa:FBtr0079100
EnsemblMetazoa:FBtr0307058 EnsemblMetazoa:FBtr0307059 GeneID:33782
KEGG:dme:Dmel_CG6944 CTD:33782 FlyBase:FBgn0002525
InParanoid:P08928 KO:K07611 OMA:LWEENEE OrthoDB:EOG4J3TZD
PhylomeDB:P08928 ChiTaRS:TSC2 GenomeRNAi:33782 NextBio:785227
Bgee:P08928 GermOnline:CG6944 GO:GO:0071763 Uniprot:P08928
Length = 622
Score = 365 (133.5 bits), Expect = 5.9e-33, P = 5.9e-33
Identities = 72/146 (49%), Positives = 110/146 (75%)
Query: 36 TPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGS 95
TPSR + + + KRK +++E SE+ + + + V++SAKGN+EI E+DP+GKFV+L+NKGS
Sbjct: 435 TPSRRTPSAAVKRKRAVVDE--SEDHSVADYYVSASAKGNVEIKEIDPEGKFVRLFNKGS 492
Query: 96 EEQSLGNWQLVRKVQGE-VKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ 154
EE ++G WQL R + + T++KFHR+++IE G +TVWS + + A+HEPP ++VMK+Q
Sbjct: 493 EEVAIGGWQLQRLINEKGPSTTYKFHRSVRIEPNGVITVWSADTK-ASHEPPSSLVMKSQ 551
Query: 155 KFGSGDEISTILLNTDGE-LANQERI 179
K+ S D TILLN++GE +AN +RI
Sbjct: 552 KWVSADNTRTILLNSEGEAVANLDRI 577
Score = 167 (63.8 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 35/85 (41%), Positives = 58/85 (68%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSKFAR----MEAEIKRLQTEMTEQLKDYREL 260
+ +NEL AN L R ++LE Q++ ++ + + +E E+ RL+ EMT+QLK+Y++L
Sbjct: 326 NANINELEQANADLNARIRDLERQLDNDRERHGQEIDLLEKELIRLREEMTQQLKEYQDL 385
Query: 261 MEIKINLDVEIAQYRNLMEAEESSL 285
M+IK++LD+EIA Y L+ EE+ L
Sbjct: 386 MDIKVSLDLEIAAYDKLLVGEEARL 410
>FB|FBgn0010397 [details] [associations]
symbol:LamC "Lamin C" species:7227 "Drosophila melanogaster"
[GO:0005652 "nuclear lamina" evidence=IDA] [GO:0005638 "lamin
filament" evidence=ISS;NAS;IDA] [GO:0007084 "mitotic nuclear
envelope reassembly" evidence=ISS] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0070732 "spindle envelope" evidence=IDA]
[GO:0031081 "nuclear pore distribution" evidence=IMP] [GO:0030833
"regulation of actin filament polymerization" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IDA] [GO:0005198
"structural molecule activity" evidence=IMP] [GO:0034399 "nuclear
periphery" evidence=IDA] [GO:0060415 "muscle tissue morphogenesis"
evidence=IMP] [GO:0035989 "tendon development" evidence=IMP]
InterPro:IPR001664 EMBL:AE013599 GO:GO:0005198 GO:GO:0006342
InterPro:IPR016044 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0030833 InterPro:IPR001322 Pfam:PF00932 GO:GO:0031081
GO:GO:0005638 eggNOG:NOG325506 GeneTree:ENSGT00560000076873
KO:K07611 OrthoDB:EOG4J3TZD EMBL:L07933 EMBL:X75886 EMBL:AY095046
PIR:S49020 RefSeq:NP_523742.2 UniGene:Dm.2782
ProteinModelPortal:Q03427 SMR:Q03427 MINT:MINT-1329471
STRING:Q03427 PaxDb:Q03427 EnsemblMetazoa:FBtr0087512 GeneID:36615
KEGG:dme:Dmel_CG10119 CTD:36615 FlyBase:FBgn0010397
InParanoid:Q03427 OMA:LWEENDD PhylomeDB:Q03427 GenomeRNAi:36615
NextBio:799505 Bgee:Q03427 GermOnline:CG10119 GO:GO:0070732
GO:GO:0060415 Uniprot:Q03427
Length = 621
Score = 284 (105.0 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 62/149 (41%), Positives = 99/149 (66%)
Query: 36 TPS-RGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG 94
TP GS A KR+ +++E SE+RT S + V ++AKG++EI E D +G+F+KL+NKG
Sbjct: 443 TPGISGSSAV--KRRRTVIDE--SEDRTLSEYSVNAAAKGDLEIIEADVEGRFIKLHNKG 498
Query: 95 SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ 154
+EE +L WQL R + G+ + +FKF R K+ G +VT+WS + G H+PP+N+VMK +
Sbjct: 499 TEEINLTGWQLTR-IAGDEELAFKFSRGSKVLGGASVTIWSVDA-GTAHDPPNNLVMK-K 555
Query: 155 KFGSGDEISTILLNTDGE-LANQERIIDN 182
K+ + + ++L N D E +A+ +R+ N
Sbjct: 556 KWPVANSMRSVLANADKEDVASYDRVRAN 584
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 32/85 (37%), Positives = 54/85 (63%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSK----FARMEAEIKRLQTEMTEQLKDYREL 260
+ ++ L N L R +ELE+ ++ E+ + A +EAE++R++ EM QL++Y+ L
Sbjct: 318 NAKLQNLEDTNAGLNARIRELENLLDTERQRHNQYIASLEAELQRMRDEMAHQLQEYQGL 377
Query: 261 MEIKINLDVEIAQYRNLMEAEESSL 285
M+IK++LD+EIA Y L+ EE L
Sbjct: 378 MDIKVSLDLEIAAYDKLLCGEERRL 402
>UNIPROTKB|P14731 [details] [associations]
symbol:LMNB1 "Lamin-B1" species:9031 "Gallus gallus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0005637
"nuclear inner membrane" evidence=IEA] InterPro:IPR001664
GO:GO:0005198 GO:GO:0005882 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0005637 InterPro:IPR001322 Pfam:PF00932 eggNOG:NOG325506
KO:K07611 HOGENOM:HOG000007711 EMBL:X16878 IPI:IPI00598693
PIR:S05518 RefSeq:NP_990617.1 UniGene:Gga.1368
ProteinModelPortal:P14731 SMR:P14731 STRING:P14731 PRIDE:P14731
GeneID:396223 KEGG:gga:396223 CTD:4001 InParanoid:P14731
OrthoDB:EOG45MN55 NextBio:20816275 Uniprot:P14731
Length = 584
Score = 252 (93.8 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 50/144 (34%), Positives = 87/144 (60%)
Query: 38 SRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEE 97
S SV ++ ++ I E ESE +S ++SA GN+ I E+D DGKF++L N ++
Sbjct: 404 SSRSVRTTRGKRKRIDVE-ESEASSSVSISHSASATGNISIEEIDVDGKFIRLKNTSEQD 462
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-F 156
Q +G W+++RK+ G+ S+++ ++AG TVT+W+ N G T PP +++ KNQ +
Sbjct: 463 QPMGGWEMIRKI-GDTSASYRYTSRYVLKAGQTVTIWAANA-GVTASPPTDLIWKNQNSW 520
Query: 157 GSGDEISTILLNTDGELANQERII 180
G+G+++ +L N+ GE Q +
Sbjct: 521 GTGEDVKVVLKNSQGEEVAQRSTV 544
Score = 133 (51.9 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 25/70 (35%), Positives = 45/70 (64%)
Query: 220 ERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYR 275
+R ELED + E+ + ++ E E+ ++ +M +Q DY +L+++K+ LD+EI+ YR
Sbjct: 318 DRVHELEDTLSKERENYRKILAENEREVAEMRNQMQQQFSDYEQLLDVKLALDMEISAYR 377
Query: 276 NLMEAEESSL 285
L+E+EE L
Sbjct: 378 KLLESEEERL 387
Score = 40 (19.1 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 4 VFETRIEEVQKKRKTELL 21
V+E I+E ++K +T L+
Sbjct: 210 VYEEEIKETRRKHETRLV 227
>UNIPROTKB|F1PBK4 [details] [associations]
symbol:LMNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043274 "phospholipase binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005638 "lamin
filament" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 GO:GO:0005635 GO:GO:0005654
GO:GO:0005198 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 GO:GO:0005638 GeneTree:ENSGT00560000076873 KO:K07611
CTD:4001 EMBL:AAEX03007752 RefSeq:XP_531892.3
Ensembl:ENSCAFT00000000912 GeneID:474663 KEGG:cfa:474663
Uniprot:F1PBK4
Length = 454
Score = 251 (93.4 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 51/144 (35%), Positives = 87/144 (60%)
Query: 38 SRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEE 97
S SV ++ ++ + E ESE +S ++SA GN+ I E+D DGKF++L N ++
Sbjct: 273 SSRSVRTTRGKRKRVDVE-ESEASSSVSISHSASATGNVCIEEIDVDGKFIRLKNTSEQD 331
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-F 156
Q +G W+++RK+ G+ S+K+ ++AG TVT+W+ N G T PP +++ KNQ +
Sbjct: 332 QPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTIWAANA-GVTASPPTDLIWKNQNSW 389
Query: 157 GSGDEISTILLNTDGELANQERII 180
G+G+++ IL N+ GE Q +
Sbjct: 390 GTGEDVKVILKNSQGEEVAQRSTV 413
Score = 143 (55.4 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELM 261
++++ L+ + ER +ELED + E+ RM E E+ ++ +M +QL DY +L+
Sbjct: 173 SQLSNLQKESRACLERIQELEDLLAKERDNSRRMLSDKEREMAEIRDQMQQQLNDYEQLL 232
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
++K+ LD+EI+ YR L+E EE L
Sbjct: 233 DVKLALDMEISAYRKLLEGEEERL 256
>UNIPROTKB|J9P3G1 [details] [associations]
symbol:LMNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 GO:GO:0005198 GO:GO:0005882 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
InterPro:IPR001322 Pfam:PF00932 GeneTree:ENSGT00560000076873
OMA:QKESRAC EMBL:AAEX03007752 Ensembl:ENSCAFT00000049391
Uniprot:J9P3G1
Length = 475
Score = 251 (93.4 bits), Expect = 7.5e-21, P = 7.5e-21
Identities = 51/144 (35%), Positives = 87/144 (60%)
Query: 38 SRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEE 97
S SV ++ ++ + E ESE +S ++SA GN+ I E+D DGKF++L N ++
Sbjct: 294 SSRSVRTTRGKRKRVDVE-ESEASSSVSISHSASATGNVCIEEIDVDGKFIRLKNTSEQD 352
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-F 156
Q +G W+++RK+ G+ S+K+ ++AG TVT+W+ N G T PP +++ KNQ +
Sbjct: 353 QPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTIWAANA-GVTASPPTDLIWKNQNSW 410
Query: 157 GSGDEISTILLNTDGELANQERII 180
G+G+++ IL N+ GE Q +
Sbjct: 411 GTGEDVKVILKNSQGEEVAQRSTV 434
Score = 143 (55.4 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELM 261
++++ L+ + ER +ELED + E+ RM E E+ ++ +M +QL DY +L+
Sbjct: 194 SQLSNLQKESRACLERIQELEDLLAKERDNSRRMLSDKEREMAEIRDQMQQQLNDYEQLL 253
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
++K+ LD+EI+ YR L+E EE L
Sbjct: 254 DVKLALDMEISAYRKLLEGEEERL 277
>UNIPROTKB|F1NAM2 [details] [associations]
symbol:LMNB1 "Lamin-B1" species:9031 "Gallus gallus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005638 "lamin
filament" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0043274 "phospholipase binding" evidence=IEA]
InterPro:IPR001664 GO:GO:0005635 GO:GO:0005654 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322 Pfam:PF00932
GO:GO:0005638 GeneTree:ENSGT00560000076873 IPI:IPI00598693
OMA:QKESRAC EMBL:AADN02073810 EMBL:AADN02073808 EMBL:AADN02073809
Ensembl:ENSGALT00000023681 Uniprot:F1NAM2
Length = 584
Score = 252 (93.8 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 50/144 (34%), Positives = 87/144 (60%)
Query: 38 SRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEE 97
S SV ++ ++ I E ESE +S ++SA GN+ I E+D DGKF++L N ++
Sbjct: 404 SSRSVRTTRGKRKRIDVE-ESEASSSVSISHSASATGNISIEEIDVDGKFIRLKNTSEQD 462
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-F 156
Q +G W+++RK+ G+ S+++ ++AG TVT+W+ N G T PP +++ KNQ +
Sbjct: 463 QPMGGWEMIRKI-GDTSASYRYTSRYVLKAGQTVTIWAANA-GVTASPPTDLIWKNQNSW 520
Query: 157 GSGDEISTILLNTDGELANQERII 180
G+G+++ +L N+ GE Q +
Sbjct: 521 GTGEDVKVVLKNSQGEEVAQRSTV 544
Score = 133 (51.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 25/70 (35%), Positives = 45/70 (64%)
Query: 220 ERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYR 275
+R ELED + E+ + ++ E E+ ++ +M +Q DY +L+++K+ LD+EI+ YR
Sbjct: 318 DRVHELEDTLSKERENYRKILAENEREVAEMRNQMQQQFSDYEQLLDVKLALDMEISAYR 377
Query: 276 NLMEAEESSL 285
L+E+EE L
Sbjct: 378 KLLESEEERL 387
>UNIPROTKB|F1NR20 [details] [associations]
symbol:LMNB1 "Lamin-B1" species:9031 "Gallus gallus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005638 "lamin
filament" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0043274 "phospholipase binding" evidence=IEA]
InterPro:IPR001664 GO:GO:0005635 GO:GO:0005654 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322 Pfam:PF00932
GO:GO:0005638 GeneTree:ENSGT00560000076873 OMA:QKESRAC
EMBL:AADN02073810 EMBL:AADN02073808 EMBL:AADN02073809
IPI:IPI00821903 Ensembl:ENSGALT00000037740 Uniprot:F1NR20
Length = 585
Score = 252 (93.8 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 50/144 (34%), Positives = 87/144 (60%)
Query: 38 SRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEE 97
S SV ++ ++ I E ESE +S ++SA GN+ I E+D DGKF++L N ++
Sbjct: 405 SSRSVRTTRGKRKRIDVE-ESEASSSVSISHSASATGNISIEEIDVDGKFIRLKNTSEQD 463
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-F 156
Q +G W+++RK+ G+ S+++ ++AG TVT+W+ N G T PP +++ KNQ +
Sbjct: 464 QPMGGWEMIRKI-GDTSASYRYTSRYVLKAGQTVTIWAANA-GVTASPPTDLIWKNQNSW 521
Query: 157 GSGDEISTILLNTDGELANQERII 180
G+G+++ +L N+ GE Q +
Sbjct: 522 GTGEDVKVVLKNSQGEEVAQRSTV 545
Score = 133 (51.9 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 25/70 (35%), Positives = 45/70 (64%)
Query: 220 ERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYR 275
+R ELED + E+ + ++ E E+ ++ +M +Q DY +L+++K+ LD+EI+ YR
Sbjct: 319 DRVHELEDTLSKERENYRKILAENEREVAEMRNQMQQQFSDYEQLLDVKLALDMEISAYR 378
Query: 276 NLMEAEESSL 285
L+E+EE L
Sbjct: 379 KLLESEEERL 388
>MGI|MGI:96795 [details] [associations]
symbol:Lmnb1 "lamin B1" species:10090 "Mus musculus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005638 "lamin filament" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005882 "intermediate
filament" evidence=IEA] [GO:0008432 "JUN kinase binding"
evidence=NAS] [GO:0016020 "membrane" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=ISO] [GO:0031662 "positive regulation of
cyclin-dependent protein serine/threonine kinase activity involved
in G2/M" evidence=NAS] [GO:0043274 "phospholipase binding"
evidence=IPI] [GO:0046330 "positive regulation of JNK cascade"
evidence=NAS] InterPro:IPR001664 MGI:MGI:96795 GO:GO:0005635
GO:GO:0005654 GO:GO:0005198 GO:GO:0046330 Reactome:REACT_118161
Reactome:REACT_120463 Reactome:REACT_75800 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0016363 GO:GO:0005637
GO:GO:0008432 InterPro:IPR001322 Pfam:PF00932 GO:GO:0031662
GO:GO:0005638 eggNOG:NOG325506 GeneTree:ENSGT00560000076873
KO:K07611 HOGENOM:HOG000007711 CTD:4001 OrthoDB:EOG45MN55
OMA:QKESRAC ChiTaRS:LMNB1 EMBL:X16705 EMBL:M35153 EMBL:D50080
EMBL:BC052729 EMBL:BC058392 IPI:IPI00230394 PIR:S07720
RefSeq:NP_034851.2 UniGene:Mm.4105 ProteinModelPortal:P14733
SMR:P14733 IntAct:P14733 STRING:P14733 PhosphoSite:P14733
REPRODUCTION-2DPAGE:IPI00230394 SWISS-2DPAGE:P14733 PaxDb:P14733
PRIDE:P14733 Ensembl:ENSMUST00000025486 GeneID:16906 KEGG:mmu:16906
UCSC:uc012bdd.1 InParanoid:P14733 NextBio:290940 Bgee:P14733
CleanEx:MM_LMNB1 Genevestigator:P14733
GermOnline:ENSMUSG00000024590 Uniprot:P14733
Length = 588
Score = 252 (93.8 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 52/144 (36%), Positives = 87/144 (60%)
Query: 38 SRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEE 97
S SV ++ ++ + E ESE +S ++SA GN+ I E+D DGKF++L N ++
Sbjct: 406 SSRSVRTTRGKRKRVDVE-ESEASSSVSISHSASATGNVCIEEIDVDGKFIRLKNTSEQD 464
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-F 156
Q +G W+++RK+ G+ S+K+ ++AG TVTVW+ N G T PP +++ KNQ +
Sbjct: 465 QPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTVWAANA-GVTASPPTDLIWKNQNSW 522
Query: 157 GSGDEISTILLNTDGELANQERII 180
G+G+++ IL N+ GE Q +
Sbjct: 523 GTGEDVKVILKNSQGEEVAQRSTV 546
Score = 145 (56.1 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELM 261
++++ L+ + ER +ELED + E+ RM E E+ ++ +M +QL DY +L+
Sbjct: 306 SQLSNLQKESRACLERIQELEDMLAKERDNSRRMLSDREREMAEIRDQMQQQLSDYEQLL 365
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
++K+ LD+EI+ YR L+E EE L
Sbjct: 366 DVKLALDMEISAYRKLLEGEEERL 389
>UNIPROTKB|F1PBJ3 [details] [associations]
symbol:LMNA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090343 "positive regulation of cell aging"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0035105 "sterol regulatory element
binding protein import into nucleus" evidence=IEA] [GO:0030951
"establishment or maintenance of microtubule cytoskeleton polarity"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0006998 "nuclear envelope organization" evidence=IEA]
[GO:0005638 "lamin filament" evidence=IEA] [GO:0005635 "nuclear
envelope" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 GO:GO:0005635 GO:GO:0048471
GO:GO:0042981 GO:GO:0005198 GO:GO:0071456 GO:GO:0030334
GO:GO:0006998 GO:GO:0007517 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0030951
GO:GO:0055015 InterPro:IPR001322 Pfam:PF00932 GO:GO:0005638
GeneTree:ENSGT00560000076873 CTD:4000 KO:K12641 GO:GO:0090343
GO:GO:0035105 EMBL:AAEX03005326 RefSeq:XP_864434.1
ProteinModelPortal:F1PBJ3 Ensembl:ENSCAFT00000026695 GeneID:480124
KEGG:cfa:480124 NextBio:20855195 Uniprot:F1PBJ3
Length = 665
Score = 253 (94.1 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 56/146 (38%), Positives = 85/146 (58%)
Query: 36 TPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGS 95
T GS+ +KKRKL ES E SS F + G + + EVD +GKFV+L NK S
Sbjct: 409 TQGTGSI--TKKRKL------ESSESRSSSFSQHARTSGRVAVEEVDEEGKFVRLRNKSS 460
Query: 96 EEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK 155
E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP ++V K Q
Sbjct: 461 EDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPTDLVWKAQN 519
Query: 156 -FGSGDEISTILLNTDGELANQERII 180
+G G+ + T L+N+ GE +++
Sbjct: 520 TWGCGNSLRTALINSTGEEVAMRKLV 545
Score = 123 (48.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 223 KELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ E E+ ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDSLARERDTSRRLLADKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>UNIPROTKB|P20700 [details] [associations]
symbol:LMNB1 "Lamin-B1" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005638 "lamin filament" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0043274 "phospholipase binding"
evidence=IEA] [GO:0005637 "nuclear inner membrane" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=TAS] [GO:0006915 "apoptotic
process" evidence=TAS] [GO:0006921 "cellular component disassembly
involved in execution phase of apoptosis" evidence=TAS]
Reactome:REACT_578 InterPro:IPR001664 GO:GO:0005635
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005198
Pathway_Interaction_DB:caspase_pathway Reactome:REACT_111183
GO:GO:0006921 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0016363 EMBL:CH471086 GO:GO:0005637 InterPro:IPR001322
Pfam:PF00932 GO:GO:0005638 eggNOG:NOG325506 KO:K07611
HOGENOM:HOG000007711 CTD:4001 OrthoDB:EOG45MN55 EMBL:M34458
EMBL:L37747 EMBL:L37737 EMBL:L37738 EMBL:L37739 EMBL:L37740
EMBL:L37741 EMBL:L37742 EMBL:L37743 EMBL:L37744 EMBL:L37745
EMBL:L37746 EMBL:AK312603 EMBL:BC012295 EMBL:BC103723
IPI:IPI00217975 PIR:A34707 RefSeq:NP_005564.1 UniGene:Hs.89497
PDB:2KPW PDB:3JT0 PDB:3TYY PDB:3UMN PDBsum:2KPW PDBsum:3JT0
PDBsum:3TYY PDBsum:3UMN ProteinModelPortal:P20700 SMR:P20700
DIP:DIP-34897N IntAct:P20700 MINT:MINT-3009331 STRING:P20700
PhosphoSite:P20700 DMDM:125953 SWISS-2DPAGE:P20700 PaxDb:P20700
PeptideAtlas:P20700 PRIDE:P20700 DNASU:4001 Ensembl:ENST00000261366
GeneID:4001 KEGG:hsa:4001 UCSC:uc003kud.2 GeneCards:GC05P126112
HGNC:HGNC:6637 HPA:CAB005269 MIM:150340 MIM:169500
neXtProt:NX_P20700 Orphanet:99027 PharmGKB:PA30403
InParanoid:P20700 OMA:QKESRAC PhylomeDB:P20700 ChiTaRS:LMNB1
EvolutionaryTrace:P20700 GenomeRNAi:4001 NextBio:15700
PMAP-CutDB:P20700 ArrayExpress:P20700 Bgee:P20700 CleanEx:HS_LMNB1
Genevestigator:P20700 GermOnline:ENSG00000113368 Uniprot:P20700
Length = 586
Score = 251 (93.4 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 51/144 (35%), Positives = 87/144 (60%)
Query: 38 SRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEE 97
S SV ++ ++ + E ESE +S ++SA GN+ I E+D DGKF++L N ++
Sbjct: 405 SSRSVRTTRGKRKRVDVE-ESEASSSVSISHSASATGNVCIEEIDVDGKFIRLKNTSEQD 463
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-F 156
Q +G W+++RK+ G+ S+K+ ++AG TVT+W+ N G T PP +++ KNQ +
Sbjct: 464 QPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTIWAANA-GVTASPPTDLIWKNQNSW 521
Query: 157 GSGDEISTILLNTDGELANQERII 180
G+G+++ IL N+ GE Q +
Sbjct: 522 GTGEDVKVILKNSQGEEVAQRSTV 545
Score = 143 (55.4 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELM 261
++++ L+ + ER +ELED + E+ RM E E+ ++ +M +QL DY +L+
Sbjct: 305 SQLSNLQKESRACLERIQELEDLLAKEKDNSRRMLTDKEREMAEIRDQMQQQLNDYEQLL 364
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
++K+ LD+EI+ YR L+E EE L
Sbjct: 365 DVKLALDMEISAYRKLLEGEEERL 388
>UNIPROTKB|F1RKM0 [details] [associations]
symbol:LMNB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043274 "phospholipase binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005638 "lamin
filament" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 GO:GO:0005635 GO:GO:0005654
GO:GO:0005198 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 GO:GO:0005638 GeneTree:ENSGT00560000076873 KO:K07611
CTD:4001 OMA:QKESRAC EMBL:CU855517 RefSeq:XP_003123930.2
UniGene:Ssc.9125 Ensembl:ENSSSCT00000015568 GeneID:100513342
KEGG:ssc:100513342 Uniprot:F1RKM0
Length = 586
Score = 251 (93.4 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 51/144 (35%), Positives = 87/144 (60%)
Query: 38 SRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEE 97
S SV ++ ++ + E ESE +S ++SA GN+ I E+D DGKF++L N ++
Sbjct: 405 SSRSVRTTRGKRKRVDVE-ESEASSSVSISHSASATGNVCIEEIDVDGKFIRLKNTSEQD 463
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-F 156
Q +G W+++RK+ G+ S+K+ ++AG TVT+W+ N G T PP +++ KNQ +
Sbjct: 464 QPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTIWAANA-GVTASPPTDLIWKNQNSW 521
Query: 157 GSGDEISTILLNTDGELANQERII 180
G+G+++ IL N+ GE Q +
Sbjct: 522 GTGEDVKVILKNSQGEEVAQRSTV 545
Score = 143 (55.4 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELM 261
++++ L+ + ER +ELED + E+ RM E E+ ++ +M +QL DY +L+
Sbjct: 305 SQLSNLQKESRACLERIQELEDLLAKERDNSRRMLSDKEREMAEIRDQMQQQLNDYEQLL 364
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
++K+ LD+EI+ YR L+E EE L
Sbjct: 365 DVKLALDMEISAYRKLLEGEEERL 388
>RGD|620522 [details] [associations]
symbol:Lmnb1 "lamin B1" species:10116 "Rattus norvegicus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=IEA;ISO] [GO:0005637 "nuclear inner membrane"
evidence=IEA] [GO:0005638 "lamin filament" evidence=IEA;ISO]
[GO:0005654 "nucleoplasm" evidence=IEA;ISO] [GO:0005882
"intermediate filament" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IDA] [GO:0043274 "phospholipase binding" evidence=IEA;ISO]
InterPro:IPR001664 RGD:620522 GO:GO:0005654 GO:GO:0005198
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0016363
GO:GO:0005637 InterPro:IPR001322 Pfam:PF00932 GO:GO:0005638
eggNOG:NOG325506 KO:K07611 HOGENOM:HOG000007711 CTD:4001
OrthoDB:EOG45MN55 EMBL:U72353 IPI:IPI00231418 RefSeq:NP_446357.1
UniGene:Rn.11362 ProteinModelPortal:P70615 SMR:P70615 STRING:P70615
PhosphoSite:P70615 World-2DPAGE:0004:P70615 PRIDE:P70615
GeneID:116685 KEGG:rno:116685 UCSC:RGD:620522 InParanoid:P70615
NextBio:619540 Genevestigator:P70615 GermOnline:ENSRNOG00000013774
Uniprot:P70615
Length = 587
Score = 251 (93.4 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 51/144 (35%), Positives = 87/144 (60%)
Query: 38 SRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEE 97
S SV ++ ++ + E ESE +S ++SA GN+ I E+D DGKF++L N ++
Sbjct: 405 SSRSVRTTRGKRKRVDVE-ESEASSSVSISHSASATGNVCIEEIDVDGKFIRLKNTSEQD 463
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-F 156
Q +G W+++RK+ G+ S+K+ ++AG TVTVW+ N G T PP +++ KNQ +
Sbjct: 464 QPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTVWAANA-GVTASPPTDLIWKNQNSW 521
Query: 157 GSGDEISTILLNTDGELANQERII 180
G+G+++ +L N+ GE Q +
Sbjct: 522 GTGEDVKVVLKNSQGEEVAQRSTV 545
Score = 144 (55.7 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELM 261
++++ L+ + ER +ELED + E+ RM E E+ ++ +M +QL DY +L+
Sbjct: 305 SQLSNLQKDSRACLERIQELEDMLAKERDNSRRMLSDKEREMAEIRDQMQQQLNDYEQLL 364
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
++K+ LD+EI+ YR L+E EE L
Sbjct: 365 DVKLALDMEISAYRKLLEGEEERL 388
>UNIPROTKB|P70615 [details] [associations]
symbol:Lmnb1 "Lamin-B1" species:10116 "Rattus norvegicus"
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 RGD:620522 GO:GO:0005654 GO:GO:0005198
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0016363
GO:GO:0005637 InterPro:IPR001322 Pfam:PF00932 GO:GO:0005638
eggNOG:NOG325506 KO:K07611 HOGENOM:HOG000007711 CTD:4001
OrthoDB:EOG45MN55 EMBL:U72353 IPI:IPI00231418 RefSeq:NP_446357.1
UniGene:Rn.11362 ProteinModelPortal:P70615 SMR:P70615 STRING:P70615
PhosphoSite:P70615 World-2DPAGE:0004:P70615 PRIDE:P70615
GeneID:116685 KEGG:rno:116685 UCSC:RGD:620522 InParanoid:P70615
NextBio:619540 Genevestigator:P70615 GermOnline:ENSRNOG00000013774
Uniprot:P70615
Length = 587
Score = 251 (93.4 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 51/144 (35%), Positives = 87/144 (60%)
Query: 38 SRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEE 97
S SV ++ ++ + E ESE +S ++SA GN+ I E+D DGKF++L N ++
Sbjct: 405 SSRSVRTTRGKRKRVDVE-ESEASSSVSISHSASATGNVCIEEIDVDGKFIRLKNTSEQD 463
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-F 156
Q +G W+++RK+ G+ S+K+ ++AG TVTVW+ N G T PP +++ KNQ +
Sbjct: 464 QPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTVWAANA-GVTASPPTDLIWKNQNSW 521
Query: 157 GSGDEISTILLNTDGELANQERII 180
G+G+++ +L N+ GE Q +
Sbjct: 522 GTGEDVKVVLKNSQGEEVAQRSTV 545
Score = 144 (55.7 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELM 261
++++ L+ + ER +ELED + E+ RM E E+ ++ +M +QL DY +L+
Sbjct: 305 SQLSNLQKDSRACLERIQELEDMLAKERDNSRRMLSDKEREMAEIRDQMQQQLNDYEQLL 364
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
++K+ LD+EI+ YR L+E EE L
Sbjct: 365 DVKLALDMEISAYRKLLEGEEERL 388
>UNIPROTKB|J9NSW5 [details] [associations]
symbol:LMNA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 GO:GO:0005198 GO:GO:0005882 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
InterPro:IPR001322 Pfam:PF00932 GeneTree:ENSGT00560000076873
OMA:HCSGSGD EMBL:AAEX03005326 Ensembl:ENSCAFT00000045788
Uniprot:J9NSW5
Length = 759
Score = 253 (94.1 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 56/146 (38%), Positives = 85/146 (58%)
Query: 36 TPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGS 95
T GS+ +KKRKL ES E SS F + G + + EVD +GKFV+L NK S
Sbjct: 409 TQGTGSI--TKKRKL------ESSESRSSSFSQHARTSGRVAVEEVDEEGKFVRLRNKSS 460
Query: 96 EEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK 155
E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP ++V K Q
Sbjct: 461 EDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPTDLVWKAQN 519
Query: 156 -FGSGDEISTILLNTDGELANQERII 180
+G G+ + T L+N+ GE +++
Sbjct: 520 TWGCGNSLRTALINSTGEEVAMRKLV 545
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 223 KELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ E E+ ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDSLARERDTSRRLLADKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>RGD|1563803 [details] [associations]
symbol:Lmnb2 "lamin B2" species:10116 "Rattus norvegicus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA;ISO] [GO:0005638 "lamin
filament" evidence=IEA;ISO] InterPro:IPR001664 RGD:1563803
GO:GO:0005198 GO:GO:0005882 InterPro:IPR016044 PANTHER:PTHR23239
Pfam:PF00038 InterPro:IPR001322 Pfam:PF00932
GeneTree:ENSGT00560000076873 OrthoDB:EOG4ZCT4D IPI:IPI00366190
PRIDE:D3ZLC1 Ensembl:ENSRNOT00000022336 UCSC:RGD:1563803
NextBio:645539 Uniprot:D3ZLC1
Length = 598
Score = 236 (88.1 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 52/119 (43%), Positives = 75/119 (63%)
Query: 58 SEERTSSGFQVT--SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKV-QGEVK 114
S SSG ++ + A G + I EVD +G+FV+L N ++QSLGNW++ ++V +GE
Sbjct: 432 SASSVSSGSRLAQQAGATGVVNIDEVDLEGRFVRLKNSSDKDQSLGNWRIKKQVLEGE-D 490
Query: 115 TSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
++KF + AG TVTVW+ GATH PP +V KNQ +GSG+ T+L+N DGE
Sbjct: 491 IAYKFTPKYVLRAGQTVTVWAAGA-GATHSPPSTLVWKNQSSWGSGENFRTVLVNADGE 548
Score = 132 (51.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 28/67 (41%), Positives = 43/67 (64%)
Query: 223 KELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
+ELE+ + E+ KF M E E+ ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 314 RELEEALAGERDKFRNMLDAKEQEMAEVRDAMQQQLAEYQELLDIKLALDMEICSYRKLL 373
Query: 279 EAEESSL 285
E EE L
Sbjct: 374 EGEEERL 380
Score = 36 (17.7 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 37 PSRGSVAPSKKRKLNILEEYE 57
P GS P +L+ L+E E
Sbjct: 6 PRAGSATPLSPTRLSRLQEKE 26
>UNIPROTKB|F1RLQ2 [details] [associations]
symbol:LMNA "Prelamin-A/C" species:9823 "Sus scrofa"
[GO:0090343 "positive regulation of cell aging" evidence=IEA]
[GO:0071456 "cellular response to hypoxia" evidence=IEA]
[GO:0055015 "ventricular cardiac muscle cell development"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0035105 "sterol regulatory element binding
protein import into nucleus" evidence=IEA] [GO:0030951
"establishment or maintenance of microtubule cytoskeleton polarity"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0006998 "nuclear envelope organization" evidence=IEA]
[GO:0005638 "lamin filament" evidence=IEA] [GO:0005635 "nuclear
envelope" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 GO:GO:0005635 GO:GO:0048471
GO:GO:0042981 GO:GO:0005198 GO:GO:0071456 GO:GO:0030334
GO:GO:0006998 GO:GO:0007517 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0030951
GO:GO:0055015 InterPro:IPR001322 Pfam:PF00932 GO:GO:0005638
GeneTree:ENSGT00560000076873 OMA:HCSGSGD GO:GO:0090343
GO:GO:0035105 EMBL:CU302298 Ensembl:ENSSSCT00000007115
ArrayExpress:F1RLQ2 Uniprot:F1RLQ2
Length = 664
Score = 248 (92.4 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 57/146 (39%), Positives = 87/146 (59%)
Query: 36 TPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGS 95
T S GSV +KKRKL ES E SS F + G + + EVD +GKFV+L NK +
Sbjct: 409 TQSGGSV--TKKRKL------ESSESRSS-FSQHARTSGRVAVEEVDEEGKFVRLRNKSN 459
Query: 96 EEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK 155
E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP ++V K+Q
Sbjct: 460 EDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPADLVWKSQN 518
Query: 156 -FGSGDEISTILLNTDGELANQERII 180
+G G+ + T L+N+ GE +++
Sbjct: 519 TWGCGNSLRTALINSTGEEVAMRKLV 544
Score = 123 (48.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 223 KELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ E E+ ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDSLARERDTSRRLLADKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>UNIPROTKB|Q3ZD69 [details] [associations]
symbol:LMNA "Prelamin-A/C" species:9823 "Sus scrofa"
[GO:0034504 "protein localization to nucleus" evidence=ISS]
[GO:0005635 "nuclear envelope" evidence=ISS] [GO:0090343 "positive
regulation of cell aging" evidence=ISS] [GO:0005882 "intermediate
filament" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 GO:GO:0005635 GO:GO:0005198
GO:GO:0005882 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0034504 InterPro:IPR001322 Pfam:PF00932 eggNOG:NOG325506
CTD:4000 KO:K12641 OrthoDB:EOG4S4PG2 GO:GO:0090343 EMBL:AY995338
EMBL:AY995336 EMBL:AY995337 RefSeq:NP_001104727.1 UniGene:Ssc.944
ProteinModelPortal:Q3ZD69 SMR:Q3ZD69 STRING:Q3ZD69 PRIDE:Q3ZD69
GeneID:100126859 KEGG:ssc:100126859 HOGENOM:HOG000007711
Uniprot:Q3ZD69
Length = 664
Score = 248 (92.4 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 57/146 (39%), Positives = 87/146 (59%)
Query: 36 TPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGS 95
T S GSV +KKRKL ES E SS F + G + + EVD +GKFV+L NK +
Sbjct: 409 TQSGGSV--TKKRKL------ESSESRSS-FSQHARTSGRVAVEEVDEEGKFVRLRNKSN 459
Query: 96 EEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK 155
E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP ++V K+Q
Sbjct: 460 EDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPADLVWKSQN 518
Query: 156 -FGSGDEISTILLNTDGELANQERII 180
+G G+ + T L+N+ GE +++
Sbjct: 519 TWGCGNSLRTALINSTGEEVAMRKLV 544
Score = 123 (48.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 223 KELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ E E+ ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDSLARERDTSRRLLADKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>UNIPROTKB|P13648 [details] [associations]
symbol:LMNA "Lamin-A" species:9031 "Gallus gallus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001664 GO:GO:0005634
GO:GO:0005198 GO:GO:0005882 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
InterPro:IPR001322 Pfam:PF00932 EMBL:X16879 IPI:IPI00587219
PIR:S05517 RefSeq:NP_990618.1 UniGene:Gga.715
ProteinModelPortal:P13648 SMR:P13648 IntAct:P13648 PRIDE:P13648
GeneID:396224 KEGG:gga:396224 CTD:4000 KO:K12641 NextBio:20816276
Uniprot:P13648
Length = 657
Score = 245 (91.3 bits), Expect = 7.8e-20, P = 7.8e-20
Identities = 53/138 (38%), Positives = 84/138 (60%)
Query: 45 SKKRKLNILEEYESEE-RTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNW 103
+KKR+L E E E RTS +S G + + EVD +G+FV+L NK +E+Q+LGNW
Sbjct: 411 AKKRRLEDGEGREGREGRTSFSHHARTS--GRVGVEEVDLEGRFVRLRNKSNEDQALGNW 468
Query: 104 QLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEI 162
Q+ R+ + +++F ++AG VT+W+ GATH PP ++V K Q +GSGD +
Sbjct: 469 QVKRQNGDDPPLTYRFPPKFTLKAGQAVTIWASGA-GATHSPPSDVVWKAQSSWGSGDSL 527
Query: 163 STILLNTDGELANQERII 180
T L+N++GE +++
Sbjct: 528 RTALINSNGEEVAMRKLV 545
Score = 126 (49.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 210 ELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDV 269
+L A +L E + L + E + A E E+ ++ M +QL +Y+EL++IK+ LD+
Sbjct: 311 QLAAKEAKLREVEEALSREREGGRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDM 370
Query: 270 EIAQYRNLMEAEESSL 285
EI YR L+E EE L
Sbjct: 371 EINAYRKLLEGEEERL 386
>UNIPROTKB|E9PSR1 [details] [associations]
symbol:Lmna "Prelamin-A/C" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 RGD:620456 GO:GO:0005198 GO:GO:0005882
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322 Pfam:PF00932
IPI:IPI00454367 PRIDE:E9PSR1 Ensembl:ENSRNOT00000041875
ArrayExpress:E9PSR1 Uniprot:E9PSR1
Length = 442
Score = 240 (89.5 bits), Expect = 9.5e-20, P = 9.5e-20
Identities = 54/144 (37%), Positives = 83/144 (57%)
Query: 38 SRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEE 97
S+G + +KKRKL ES E SS F + G + + EVD +GKFV+L NK +E+
Sbjct: 277 SQGGGSVTKKRKL------ESSESRSS-FSQHARTSGRVAVEEVDEEGKFVRLRNKSNED 329
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-F 156
QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP ++V K Q +
Sbjct: 330 QSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTIWASGA-GATHSPPTDLVWKAQNTW 388
Query: 157 GSGDEISTILLNTDGELANQERII 180
G G + T L+N GE +++
Sbjct: 389 GCGSSLRTALINATGEEVAMRKLV 412
Score = 123 (48.4 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 189 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 248
Query: 279 EAEESSL 285
E EE L
Sbjct: 249 EGEEERL 255
>UNIPROTKB|G3V8M3 [details] [associations]
symbol:Lmna "Lamin A, isoform CRA_c" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 RGD:620456 GO:GO:0005198 GO:GO:0005882
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322 Pfam:PF00932
EMBL:CH473976 UniGene:Rn.44161 PRIDE:G3V8M3
Ensembl:ENSRNOT00000026876 Uniprot:G3V8M3
Length = 462
Score = 240 (89.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 54/144 (37%), Positives = 83/144 (57%)
Query: 38 SRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEE 97
S+G + +KKRKL ES E SS F + G + + EVD +GKFV+L NK +E+
Sbjct: 297 SQGGGSVTKKRKL------ESSESRSS-FSQHARTSGRVAVEEVDEEGKFVRLRNKSNED 349
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-F 156
QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP ++V K Q +
Sbjct: 350 QSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTIWASGA-GATHSPPTDLVWKAQNTW 408
Query: 157 GSGDEISTILLNTDGELANQERII 180
G G + T L+N GE +++
Sbjct: 409 GCGSSLRTALINATGEEVAMRKLV 432
Score = 123 (48.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 209 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 268
Query: 279 EAEESSL 285
E EE L
Sbjct: 269 EGEEERL 275
>ZFIN|ZDB-GENE-020424-3 [details] [associations]
symbol:lmna "lamin A" species:7955 "Danio rerio"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0060047 "heart contraction" evidence=IMP] [GO:0090342
"regulation of cell aging" evidence=IMP] [GO:0005882 "intermediate
filament" evidence=IEA] InterPro:IPR001664 ZFIN:ZDB-GENE-020424-3
GO:GO:0090342 GO:GO:0005198 GO:GO:0005882 GO:GO:0060047
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 HSSP:P02545 CTD:4000 KO:K12641 EMBL:AF397016
IPI:IPI00506427 RefSeq:NP_694503.1 UniGene:Dr.10311
ProteinModelPortal:Q90XD7 SMR:Q90XD7 STRING:Q90XD7 PRIDE:Q90XD7
GeneID:195815 KEGG:dre:195815 InParanoid:Q90XD7 NextBio:20797178
ArrayExpress:Q90XD7 Bgee:Q90XD7 Uniprot:Q90XD7
Length = 659
Score = 243 (90.6 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 56/143 (39%), Positives = 84/143 (58%)
Query: 38 SRGSVAPSKKRKLNILEEYESEERTSSGFQVT-------SSAKGNMEITEVDPDGKFVKL 90
SR S +KKR+LN + +S+ + G VT +SA G + + EVD +GKFV+L
Sbjct: 416 SRTSSGSAKKRRLN---DNDSDASSVVGGTVTRTRIFQQASASGRVTVDEVDLEGKFVRL 472
Query: 91 YNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIV 150
NK ++QSLG+WQ+ R++ +KF ++AG TVT+W+ G TH PP ++V
Sbjct: 473 NNKSDQDQSLGHWQVKRQIGSGTPIVYKFPPKFNLKAGQTVTIWAAGA-GGTHSPPSDLV 531
Query: 151 MKNQK-FGSGDEISTILLNTDGE 172
K Q +GSGD T L+++ GE
Sbjct: 532 WKTQNSWGSGDLFQTTLISSSGE 554
Score = 125 (49.1 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 27/87 (31%), Positives = 48/87 (55%)
Query: 199 GRSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYR 258
G S + +L A ++ E + L + + + + E E+ ++ M +QL +Y+
Sbjct: 298 GVSSQLSQLQKQLAAREAKIRELEEALSRERDILRRRLEDKEKEMAEMRQRMQQQLDEYQ 357
Query: 259 ELMEIKINLDVEIAQYRNLMEAEESSL 285
EL++IK+ LD+EI+ YR L+E EE L
Sbjct: 358 ELLDIKLALDMEISAYRKLLEGEEERL 384
>UNIPROTKB|Q5TCI8 [details] [associations]
symbol:LMNA "Prelamin-A/C" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 GO:GO:0005198 GO:GO:0005882 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 EMBL:AL355388 InterPro:IPR001322
Pfam:PF00932 EMBL:AL135927 EMBL:AL356734 UniGene:Hs.594444
HGNC:HGNC:6636 ChiTaRS:LMNA HOGENOM:HOG000007711 IPI:IPI00514817
SMR:Q5TCI8 STRING:Q5TCI8 Ensembl:ENST00000368297
Ensembl:ENST00000392353 UCSC:uc001fnj.2 Uniprot:Q5TCI8
Length = 491
Score = 240 (89.5 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 56/146 (38%), Positives = 85/146 (58%)
Query: 36 TPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGS 95
T GSV +KKRKL ES E SS F + G + + EVD +GKFV+L NK +
Sbjct: 328 TQGGGSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGKFVRLRNKSN 378
Query: 96 EEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK 155
E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP ++V K Q
Sbjct: 379 EDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPTDLVWKAQN 437
Query: 156 -FGSGDEISTILLNTDGELANQERII 180
+G G+ + T L+N+ GE +++
Sbjct: 438 TWGCGNSLRTALINSTGEEVAMRKLV 463
Score = 123 (48.4 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 240 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 299
Query: 279 EAEESSL 285
E EE L
Sbjct: 300 EGEEERL 306
>UNIPROTKB|D6RAQ3 [details] [associations]
symbol:LMNA "Prelamin-A/C" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 GO:GO:0005198 GO:GO:0005882 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
EMBL:AL355388 InterPro:IPR001322 Pfam:PF00932 EMBL:AL135927
EMBL:AL356734 HGNC:HGNC:6636 ChiTaRS:LMNA HOGENOM:HOG000007711
IPI:IPI00514320 ProteinModelPortal:D6RAQ3 SMR:D6RAQ3 PRIDE:D6RAQ3
Ensembl:ENST00000473598 UCSC:uc001fnk.2 ArrayExpress:D6RAQ3
Bgee:D6RAQ3 Uniprot:D6RAQ3
Length = 565
Score = 240 (89.5 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 56/146 (38%), Positives = 85/146 (58%)
Query: 36 TPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGS 95
T GSV +KKRKL ES E SS F + G + + EVD +GKFV+L NK +
Sbjct: 310 TQGGGSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGKFVRLRNKSN 360
Query: 96 EEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK 155
E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP ++V K Q
Sbjct: 361 EDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPTDLVWKAQN 419
Query: 156 -FGSGDEISTILLNTDGELANQERII 180
+G G+ + T L+N+ GE +++
Sbjct: 420 TWGCGNSLRTALINSTGEEVAMRKLV 445
Score = 123 (48.4 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 222 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 281
Query: 279 EAEESSL 285
E EE L
Sbjct: 282 EGEEERL 288
>MGI|MGI:96794 [details] [associations]
symbol:Lmna "lamin A" species:10090 "Mus musculus" [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005635 "nuclear envelope" evidence=ISO;IDA] [GO:0005638 "lamin
filament" evidence=IDA] [GO:0005882 "intermediate filament"
evidence=IEA] [GO:0006997 "nucleus organization" evidence=IMP]
[GO:0006998 "nuclear envelope organization" evidence=IGI]
[GO:0007517 "muscle organ development" evidence=ISO] [GO:0016363
"nuclear matrix" evidence=ISO] [GO:0030010 "establishment of cell
polarity" evidence=NAS] [GO:0030334 "regulation of cell migration"
evidence=IMP] [GO:0030951 "establishment or maintenance of
microtubule cytoskeleton polarity" evidence=IMP] [GO:0034504
"protein localization to nucleus" evidence=IMP] [GO:0035105 "sterol
regulatory element binding protein import into nucleus"
evidence=IMP] [GO:0042981 "regulation of apoptotic process"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=IMP] [GO:0090343 "positive regulation of cell
aging" evidence=ISO] InterPro:IPR001664 MGI:MGI:96794 GO:GO:0005634
GO:GO:0005635 GO:GO:0048471 GO:GO:0042981 GO:GO:0005198
GO:GO:0071456 GO:GO:0007283 GO:GO:0030334 GO:GO:0006998
Reactome:REACT_118161 Reactome:REACT_120463 Reactome:REACT_75800
GO:GO:0007517 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0016363 GO:GO:0030951 GO:GO:0030010 GO:GO:0055015
InterPro:IPR001322 Pfam:PF00932 GO:GO:0005638 eggNOG:NOG325506
GeneTree:ENSGT00560000076873 CTD:4000 KO:K12641 OMA:HCSGSGD
OrthoDB:EOG4S4PG2 GO:GO:0090343 GO:GO:0035105 EMBL:D49733
EMBL:X14170 EMBL:D14850 EMBL:AK004619 EMBL:AK147150 EMBL:AK149998
EMBL:AK150501 EMBL:AK150624 EMBL:AK152539 EMBL:AK161221
EMBL:AK167858 EMBL:BC015302 EMBL:BC094020 EMBL:D13181
IPI:IPI00230435 IPI:IPI00400300 IPI:IPI00620256 PIR:I53414
PIR:S04333 PIR:S18324 PIR:S28182 RefSeq:NP_001002011.2
RefSeq:NP_001104572.1 RefSeq:NP_062263.1 UniGene:Mm.243014
UniGene:Mm.471227 PDB:1UFG PDBsum:1UFG ProteinModelPortal:P48678
SMR:P48678 IntAct:P48678 MINT:MINT-1868521 STRING:P48678
PhosphoSite:P48678 REPRODUCTION-2DPAGE:IPI00400300
REPRODUCTION-2DPAGE:IPI00620256 PaxDb:P48678 PRIDE:P48678
Ensembl:ENSMUST00000029699 Ensembl:ENSMUST00000036252
Ensembl:ENSMUST00000120377 GeneID:16905 KEGG:mmu:16905
UCSC:uc008pvk.2 InParanoid:P48678 EvolutionaryTrace:P48678
NextBio:290934 Bgee:P48678 CleanEx:MM_LMNA Genevestigator:P48678
GermOnline:ENSMUSG00000028063 Uniprot:P48678
Length = 665
Score = 241 (89.9 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 54/144 (37%), Positives = 84/144 (58%)
Query: 38 SRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEE 97
S+G + +KKRKL ES E SS F + G + + EVD +GKFV+L NK +E+
Sbjct: 409 SQGGGSVTKKRKL------ESSESRSS-FSQHARTSGRVAVEEVDEEGKFVRLRNKSNED 461
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-F 156
QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP ++V K Q +
Sbjct: 462 QSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTIWASGA-GATHSPPTDLVWKAQNTW 520
Query: 157 GSGDEISTILLNTDGELANQERII 180
G G + T L+N+ GE +++
Sbjct: 521 GCGSSLRTALINSTGEEVAMRKLV 544
Score = 123 (48.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>UNIPROTKB|Q6UYC3 [details] [associations]
symbol:LMNA "Progerin" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001664 GO:GO:0005634 GO:GO:0005737 GO:GO:0005198
GO:GO:0005882 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
EMBL:AL355388 InterPro:IPR001322 Pfam:PF00932 EMBL:AL135927
EMBL:AL356734 UniGene:Hs.594444 HGNC:HGNC:6636 ChiTaRS:LMNA
HOGENOM:HOG000007711 EMBL:AY357727 IPI:IPI00644087 SMR:Q6UYC3
DIP:DIP-58162N MINT:MINT-1408464 STRING:Q6UYC3
Ensembl:ENST00000368299 UCSC:uc009wro.1 Uniprot:Q6UYC3
Length = 614
Score = 240 (89.5 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 56/146 (38%), Positives = 85/146 (58%)
Query: 36 TPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGS 95
T GSV +KKRKL ES E SS F + G + + EVD +GKFV+L NK +
Sbjct: 409 TQGGGSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGKFVRLRNKSN 459
Query: 96 EEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK 155
E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP ++V K Q
Sbjct: 460 EDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPTDLVWKAQN 518
Query: 156 -FGSGDEISTILLNTDGELANQERII 180
+G G+ + T L+N+ GE +++
Sbjct: 519 TWGCGNSLRTALINSTGEEVAMRKLV 544
Score = 123 (48.4 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>UNIPROTKB|D4A4U0 [details] [associations]
symbol:Lmna "Prelamin-A/C" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 RGD:620456 GO:GO:0005198 GO:GO:0005882
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322 Pfam:PF00932
IPI:IPI00213613 PRIDE:D4A4U0 Ensembl:ENSRNOT00000026917
ArrayExpress:D4A4U0 Uniprot:D4A4U0
Length = 640
Score = 240 (89.5 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 54/144 (37%), Positives = 83/144 (57%)
Query: 38 SRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEE 97
S+G + +KKRKL ES E SS F + G + + EVD +GKFV+L NK +E+
Sbjct: 408 SQGGGSVTKKRKL------ESSESRSS-FSQHARTSGRVAVEEVDEEGKFVRLRNKSNED 460
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-F 156
QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP ++V K Q +
Sbjct: 461 QSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTIWASGA-GATHSPPTDLVWKAQNTW 519
Query: 157 GSGDEISTILLNTDGELANQERII 180
G G + T L+N GE +++
Sbjct: 520 GCGSSLRTALINATGEEVAMRKLV 543
Score = 123 (48.4 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 320 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 379
Query: 279 EAEESSL 285
E EE L
Sbjct: 380 EGEEERL 386
>UNIPROTKB|P02545 [details] [associations]
symbol:LMNA "Prelamin-A/C" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA;TAS]
[GO:0005638 "lamin filament" evidence=IEA;TAS] [GO:0006998 "nuclear
envelope organization" evidence=IEA] [GO:0035105 "sterol regulatory
element binding protein import into nucleus" evidence=IEA]
[GO:0055015 "ventricular cardiac muscle cell development"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IDA;TAS]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] [GO:0005882
"intermediate filament" evidence=TAS] [GO:0005652 "nuclear lamina"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0090343 "positive regulation of cell aging" evidence=IDA]
[GO:0071456 "cellular response to hypoxia" evidence=IEP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0034504 "protein
localization to nucleus" evidence=ISS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006921 "cellular component disassembly involved in execution
phase of apoptosis" evidence=TAS] [GO:0006987 "activation of
signaling protein activity involved in unfolded protein response"
evidence=TAS] [GO:0030968 "endoplasmic reticulum unfolded protein
response" evidence=TAS] [GO:0030951 "establishment or maintenance
of microtubule cytoskeleton polarity" evidence=ISS] [GO:0042981
"regulation of apoptotic process" evidence=ISS] [GO:0030334
"regulation of cell migration" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_578 InterPro:IPR001664
GO:GO:0005737 GO:GO:0005635 GO:GO:0048471 Reactome:REACT_116125
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0006987 GO:GO:0042981
GO:GO:0005198 Pathway_Interaction_DB:caspase_pathway GO:GO:0071456
GO:GO:0007283 GO:GO:0030334 GO:GO:0006998 Reactome:REACT_111183
GO:GO:0007517 Orphanet:54260 GO:GO:0006921 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0016363 GO:GO:0030951
EMBL:CH471121 EMBL:AL355388 GO:GO:0055015 GO:GO:0034504
Pathway_Interaction_DB:faspathway InterPro:IPR001322 Pfam:PF00932
Orphanet:293899 Orphanet:293888 Orphanet:293910 MIM:275210
Orphanet:740 Orphanet:1662 GO:GO:0005638 eggNOG:NOG325506 CTD:4000
KO:K12641 EMBL:X03444 EMBL:X03445 EMBL:M13451 EMBL:M13452
EMBL:AK295390 EMBL:AL135927 EMBL:AL356734 EMBL:BC000511
EMBL:BC003162 EMBL:BC014507 EMBL:AF381029 IPI:IPI00021405
IPI:IPI00216952 IPI:IPI00216953 IPI:IPI00910241 PIR:A02961
PIR:A02962 RefSeq:NP_005563.1 RefSeq:NP_733821.1 RefSeq:NP_733822.1
UniGene:Hs.594444 PDB:1IFR PDB:1IVT PDB:1X8Y PDB:2XV5 PDB:3GEF
PDB:3V4Q PDB:3V4W PDB:3V5B PDBsum:1IFR PDBsum:1IVT PDBsum:1X8Y
PDBsum:2XV5 PDBsum:3GEF PDBsum:3V4Q PDBsum:3V4W PDBsum:3V5B
ProteinModelPortal:P02545 SMR:P02545 DIP:DIP-32948N IntAct:P02545
MINT:MINT-5003995 STRING:P02545 PhosphoSite:P02545 DMDM:125962
REPRODUCTION-2DPAGE:IPI00021405 REPRODUCTION-2DPAGE:IPI00216952
REPRODUCTION-2DPAGE:P02545 SWISS-2DPAGE:P02545 PaxDb:P02545
PeptideAtlas:P02545 PRIDE:P02545 DNASU:4000 Ensembl:ENST00000347559
Ensembl:ENST00000361308 Ensembl:ENST00000368300
Ensembl:ENST00000368301 Ensembl:ENST00000448611
Ensembl:ENST00000508500 GeneID:4000 KEGG:hsa:4000 UCSC:uc001fnf.1
UCSC:uc001fnh.2 UCSC:uc001fni.2 GeneCards:GC01P156053
HGNC:HGNC:6636 HPA:CAB004022 HPA:HPA006660 MIM:115200 MIM:150330
MIM:151660 MIM:159001 MIM:176670 MIM:181350 MIM:212112 MIM:248370
MIM:605588 MIM:610140 MIM:613205 neXtProt:NX_P02545 Orphanet:79474
Orphanet:280365 Orphanet:98853 Orphanet:264 Orphanet:98855
Orphanet:98856 Orphanet:157973 Orphanet:2229 Orphanet:300751
Orphanet:2348 Orphanet:79084 Orphanet:168796 Orphanet:137871
Orphanet:90153 Orphanet:99706 PharmGKB:PA231 InParanoid:P02545
OMA:HCSGSGD OrthoDB:EOG4S4PG2 PhylomeDB:P02545 ChEMBL:CHEMBL1293235
ChiTaRS:LMNA EvolutionaryTrace:P02545 GenomeRNAi:4000 NextBio:15692
PMAP-CutDB:P02545 ArrayExpress:P02545 Bgee:P02545 CleanEx:HS_LMNA
Genevestigator:P02545 GermOnline:ENSG00000160789 GO:GO:0090343
GO:GO:0035105 Uniprot:P02545
Length = 664
Score = 240 (89.5 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 56/146 (38%), Positives = 85/146 (58%)
Query: 36 TPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGS 95
T GSV +KKRKL ES E SS F + G + + EVD +GKFV+L NK +
Sbjct: 409 TQGGGSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGKFVRLRNKSN 459
Query: 96 EEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK 155
E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP ++V K Q
Sbjct: 460 EDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPTDLVWKAQN 518
Query: 156 -FGSGDEISTILLNTDGELANQERII 180
+G G+ + T L+N+ GE +++
Sbjct: 519 TWGCGNSLRTALINSTGEEVAMRKLV 544
Score = 123 (48.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>RGD|620456 [details] [associations]
symbol:Lmna "lamin A/C" species:10116 "Rattus norvegicus"
[GO:0005198 "structural molecule activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005635 "nuclear
envelope" evidence=ISO;ISS] [GO:0005638 "lamin filament"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005882
"intermediate filament" evidence=IEA] [GO:0006997 "nucleus
organization" evidence=ISO] [GO:0006998 "nuclear envelope
organization" evidence=ISO;TAS] [GO:0007283 "spermatogenesis"
evidence=IEP] [GO:0007517 "muscle organ development" evidence=ISO]
[GO:0016363 "nuclear matrix" evidence=IDA] [GO:0030334 "regulation
of cell migration" evidence=ISO] [GO:0030951 "establishment or
maintenance of microtubule cytoskeleton polarity" evidence=ISO]
[GO:0034504 "protein localization to nucleus" evidence=ISO;ISS]
[GO:0035105 "sterol regulatory element binding protein import into
nucleus" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] [GO:0055015 "ventricular cardiac muscle
cell development" evidence=ISO] [GO:0071456 "cellular response to
hypoxia" evidence=ISO] [GO:0090343 "positive regulation of cell
aging" evidence=ISO;ISS] InterPro:IPR001664 RGD:620456
GO:GO:0005635 GO:GO:0048471 GO:GO:0042981 GO:GO:0005198
GO:GO:0071456 GO:GO:0007283 GO:GO:0030334 GO:GO:0006998
GO:GO:0007517 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0016363 GO:GO:0030951 GO:GO:0055015 GO:GO:0034504
InterPro:IPR001322 Pfam:PF00932 GO:GO:0005638 eggNOG:NOG325506
CTD:4000 KO:K12641 OrthoDB:EOG4S4PG2 GO:GO:0090343 GO:GO:0035105
HOGENOM:HOG000007711 EMBL:X66870 EMBL:X76297 IPI:IPI00201060
PIR:S27267 RefSeq:NP_001002016.1 UniGene:Rn.44161
ProteinModelPortal:P48679 SMR:P48679 IntAct:P48679 STRING:P48679
PhosphoSite:P48679 PRIDE:P48679 GeneID:60374 KEGG:rno:60374
UCSC:RGD:620456 InParanoid:P48679 NextBio:612051
ArrayExpress:P48679 Genevestigator:P48679
GermOnline:ENSRNOG00000019638 Uniprot:P48679
Length = 665
Score = 240 (89.5 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 54/144 (37%), Positives = 83/144 (57%)
Query: 38 SRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEE 97
S+G + +KKRKL ES E SS F + G + + EVD +GKFV+L NK +E+
Sbjct: 409 SQGGGSVTKKRKL------ESSESRSS-FSQHARTSGRVAVEEVDEEGKFVRLRNKSNED 461
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-F 156
QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP ++V K Q +
Sbjct: 462 QSMGNWQIKRQNGDDPLMTYRFPPKFTLKAGQVVTIWASGA-GATHSPPTDLVWKAQNTW 520
Query: 157 GSGDEISTILLNTDGELANQERII 180
G G + T L+N GE +++
Sbjct: 521 GCGTSLRTALINATGEEVAMRKLV 544
Score = 123 (48.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>UNIPROTKB|G3V8L3 [details] [associations]
symbol:Lmna "Lamin A, isoform CRA_b" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0005638 "lamin filament" evidence=IEA] [GO:0006998 "nuclear
envelope organization" evidence=IEA] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0030951 "establishment or maintenance
of microtubule cytoskeleton polarity" evidence=IEA] [GO:0035105
"sterol regulatory element binding protein import into nucleus"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=IEA] [GO:0071456 "cellular response to
hypoxia" evidence=IEA] [GO:0090343 "positive regulation of cell
aging" evidence=IEA] InterPro:IPR001664 RGD:620456 GO:GO:0005198
GO:GO:0005882 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 EMBL:CH473976 GeneTree:ENSGT00560000076873 OMA:HCSGSGD
UniGene:Rn.44161 ProteinModelPortal:G3V8L3
Ensembl:ENSRNOT00000026705 Uniprot:G3V8L3
Length = 665
Score = 240 (89.5 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 54/144 (37%), Positives = 83/144 (57%)
Query: 38 SRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEE 97
S+G + +KKRKL ES E SS F + G + + EVD +GKFV+L NK +E+
Sbjct: 409 SQGGGSVTKKRKL------ESSESRSS-FSQHARTSGRVAVEEVDEEGKFVRLRNKSNED 461
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-F 156
QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP ++V K Q +
Sbjct: 462 QSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTIWASGA-GATHSPPTDLVWKAQNTW 520
Query: 157 GSGDEISTILLNTDGELANQERII 180
G G + T L+N GE +++
Sbjct: 521 GCGSSLRTALINATGEEVAMRKLV 544
Score = 123 (48.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 223 KELEDQIEYEQSKFARMEAEIKR----LQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ AE +R ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>UNIPROTKB|F1MYG5 [details] [associations]
symbol:LMNA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090343 "positive regulation of cell aging"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0035105 "sterol regulatory element
binding protein import into nucleus" evidence=IEA] [GO:0030951
"establishment or maintenance of microtubule cytoskeleton polarity"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0006998 "nuclear envelope organization" evidence=IEA]
[GO:0005638 "lamin filament" evidence=IEA] [GO:0005635 "nuclear
envelope" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 GO:GO:0005635 GO:GO:0048471
GO:GO:0042981 GO:GO:0005198 GO:GO:0071456 GO:GO:0030334
GO:GO:0006998 GO:GO:0007517 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0030951
GO:GO:0055015 InterPro:IPR001322 Pfam:PF00932 GO:GO:0005638
GeneTree:ENSGT00560000076873 OMA:HCSGSGD GO:GO:0090343
GO:GO:0035105 EMBL:DAAA02007143 EMBL:DAAA02007144 IPI:IPI00689750
Ensembl:ENSBTAT00000023373 ArrayExpress:F1MYG5 Uniprot:F1MYG5
Length = 664
Score = 238 (88.8 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 56/146 (38%), Positives = 85/146 (58%)
Query: 36 TPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGS 95
T S SV +KKRKL ES E SS F + G + + EVD +GKFV+L NK +
Sbjct: 409 TQSGSSV--TKKRKL------ESTESRSS-FSQHARTSGRVAVEEVDEEGKFVRLRNKSN 459
Query: 96 EEQSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK 155
E+QS+GNWQ+ R+ + +++F ++AG VT+W+ GATH PP ++V K Q
Sbjct: 460 EDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGA-GATHSPPTDLVWKAQN 518
Query: 156 -FGSGDEISTILLNTDGELANQERII 180
+G G+ + T L+N+ GE +++
Sbjct: 519 TWGCGNSLRTALINSTGEEVAMRKLV 544
Score = 123 (48.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 223 KELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
++LED + E+ R+ E E+ ++ M +QL +Y+EL++IK+ LD+EI YR L+
Sbjct: 321 RDLEDSLARERDTSRRLLADKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 380
Query: 279 EAEESSL 285
E EE L
Sbjct: 381 EGEEERL 387
>UNIPROTKB|F1NP51 [details] [associations]
symbol:LMNB2 "Lamin-B2" species:9031 "Gallus gallus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005638 "lamin
filament" evidence=IEA] InterPro:IPR001664 GO:GO:0005635
GO:GO:0005198 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 GO:GO:0005638 GeneTree:ENSGT00560000076873
IPI:IPI00601210 EMBL:AADN02063506 EMBL:AADN02063507
Ensembl:ENSGALT00000000640 ArrayExpress:F1NP51 Uniprot:F1NP51
Length = 600
Score = 236 (88.1 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 49/118 (41%), Positives = 76/118 (64%)
Query: 58 SEERTSSGFQVT--SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKT 115
S +SS FQ++ +SA G++ I E+D +GK+V+L N ++QSLGNW+L R++ +
Sbjct: 437 SGSSSSSSFQMSQQASATGSISIEEIDLEGKYVQLKNNSEKDQSLGNWRLKRQIGDGEEI 496
Query: 116 SFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
++KF + AG TVT+W + G +H PP +V KNQ +G+G I T L+N+DGE
Sbjct: 497 AYKFTPKYVLRAGQTVTIWGADA-GVSHSPPSVLVWKNQGSWGTGGNIRTYLVNSDGE 553
Score = 135 (52.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 28/70 (40%), Positives = 47/70 (67%)
Query: 220 ERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYR 275
+R +ELE+ + E+ KF +M E E+ ++ +M QL +Y+EL+++K+ LD+EI+ YR
Sbjct: 312 DRIRELEETMAGERDKFRKMLDAKEREMTEMRDQMQLQLTEYQELLDVKLALDMEISAYR 371
Query: 276 NLMEAEESSL 285
L+E EE L
Sbjct: 372 KLLEGEEERL 381
>UNIPROTKB|P14732 [details] [associations]
symbol:LMNB2 "Lamin-B2" species:9031 "Gallus gallus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0005637
"nuclear inner membrane" evidence=IEA] InterPro:IPR001664
GO:GO:0005198 GO:GO:0005882 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0005637 InterPro:IPR001322 Pfam:PF00932 eggNOG:NOG325506
KO:K07611 HOGENOM:HOG000007711 EMBL:X16880 IPI:IPI00601210
PIR:S05519 RefSeq:NP_990616.1 UniGene:Gga.16090
ProteinModelPortal:P14732 SMR:P14732 IntAct:P14732 STRING:P14732
PRIDE:P14732 GeneID:396222 KEGG:gga:396222 CTD:84823
InParanoid:P14732 OrthoDB:EOG4ZCT4D NextBio:20816274 Uniprot:P14732
Length = 600
Score = 236 (88.1 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 49/118 (41%), Positives = 76/118 (64%)
Query: 58 SEERTSSGFQVT--SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKT 115
S +SS FQ++ +SA G++ I E+D +GK+V+L N ++QSLGNW+L R++ +
Sbjct: 437 SGSSSSSSFQMSQQASATGSISIEEIDLEGKYVQLKNNSEKDQSLGNWRLKRQIGDGEEI 496
Query: 116 SFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
++KF + AG TVT+W + G +H PP +V KNQ +G+G I T L+N+DGE
Sbjct: 497 AYKFTPKYVLRAGQTVTIWGADA-GVSHSPPSVLVWKNQGSWGTGGNIRTYLVNSDGE 553
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 27/70 (38%), Positives = 47/70 (67%)
Query: 220 ERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYR 275
+R +EL++ + E+ KF +M E E+ ++ +M QL +Y+EL+++K+ LD+EI+ YR
Sbjct: 312 DRIRELKETMAGERDKFRKMLDAKEREMTEMRDQMQLQLTEYQELLDVKLALDMEISAYR 371
Query: 276 NLMEAEESSL 285
L+E EE L
Sbjct: 372 KLLEGEEERL 381
>UNIPROTKB|F1NVW0 [details] [associations]
symbol:LMNB2 "Lamin-B2" species:9031 "Gallus gallus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005638 "lamin
filament" evidence=IEA] InterPro:IPR001664 GO:GO:0005635
GO:GO:0005198 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 GO:GO:0005638 GeneTree:ENSGT00560000076873 OMA:HYIDRVR
EMBL:AADN02063506 EMBL:AADN02063507 IPI:IPI00680941
Ensembl:ENSGALT00000035211 ArrayExpress:F1NVW0 Uniprot:F1NVW0
Length = 613
Score = 236 (88.1 bits), Expect = 6.4e-19, P = 6.4e-19
Identities = 49/118 (41%), Positives = 76/118 (64%)
Query: 58 SEERTSSGFQVT--SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKT 115
S +SS FQ++ +SA G++ I E+D +GK+V+L N ++QSLGNW+L R++ +
Sbjct: 450 SGSSSSSSFQMSQQASATGSISIEEIDLEGKYVQLKNNSEKDQSLGNWRLKRQIGDGEEI 509
Query: 116 SFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
++KF + AG TVT+W + G +H PP +V KNQ +G+G I T L+N+DGE
Sbjct: 510 AYKFTPKYVLRAGQTVTIWGADA-GVSHSPPSVLVWKNQGSWGTGGNIRTYLVNSDGE 566
Score = 135 (52.6 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 28/70 (40%), Positives = 47/70 (67%)
Query: 220 ERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYR 275
+R +ELE+ + E+ KF +M E E+ ++ +M QL +Y+EL+++K+ LD+EI+ YR
Sbjct: 325 DRIRELEETMAGERDKFRKMLDAKEREMTEMRDQMQLQLTEYQELLDVKLALDMEISAYR 384
Query: 276 NLMEAEESSL 285
L+E EE L
Sbjct: 385 KLLEGEEERL 394
>MGI|MGI:96796 [details] [associations]
symbol:Lmnb2 "lamin B2" species:10090 "Mus musculus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005638 "lamin filament" evidence=IDA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR001664 MGI:MGI:96796
GO:GO:0005635 GO:GO:0005198 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0005637 InterPro:IPR001322 Pfam:PF00932 GO:GO:0005638
eggNOG:NOG325506 GeneTree:ENSGT00560000076873 KO:K07611
HOGENOM:HOG000007711 CTD:84823 OrthoDB:EOG4ZCT4D ChiTaRS:LMNB2
EMBL:X54098 EMBL:D13455 EMBL:BC042430 EMBL:BC051985 IPI:IPI00113886
IPI:IPI00126191 PIR:B48315 PIR:S28419 RefSeq:NP_034852.2
UniGene:Mm.7362 ProteinModelPortal:P21619 SMR:P21619 STRING:P21619
PhosphoSite:P21619 PaxDb:P21619 PRIDE:P21619
Ensembl:ENSMUST00000057623 Ensembl:ENSMUST00000105332
Ensembl:ENSMUST00000179022 GeneID:16907 KEGG:mmu:16907
UCSC:uc007gfk.1 InParanoid:P21619 NextBio:290944 Bgee:P21619
CleanEx:MM_LMNB2 Genevestigator:P21619
GermOnline:ENSMUSG00000062075 Uniprot:P21619
Length = 596
Score = 233 (87.1 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 55/134 (41%), Positives = 80/134 (59%)
Query: 46 KKRKLNILEEYESEERTS---SGFQVTSS--AKGNMEITEVDPDGKFVKLYNKGSEEQSL 100
K+R+L + S R S SG ++ A G + I EVDP+G+FV+L N ++QSL
Sbjct: 415 KRRRLETEDTSGSPSRASRVSSGSRLAQQTVATGVVNIDEVDPEGRFVRLKNSSDKDQSL 474
Query: 101 GNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGS 158
GNW++ R+V +GE ++KF + AG TVTVW+ GATH PP +V K+Q +G
Sbjct: 475 GNWRIKRQVLEGE-DIAYKFTPKYVLRAGQTVTVWAAGA-GATHSPPSTLVWKSQTNWGP 532
Query: 159 GDEISTILLNTDGE 172
G+ T L++ DGE
Sbjct: 533 GESFRTALVSADGE 546
Score = 132 (51.5 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 28/66 (42%), Positives = 44/66 (66%)
Query: 224 ELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLME 279
ELE+ + E+ KF +M E E+ ++ M +QL +Y+EL++IK+ LD+EI+ YR L+E
Sbjct: 315 ELEEALAGERDKFRKMLDAKEQEMTEVRDAMQQQLAEYQELLDIKLALDMEISAYRKLLE 374
Query: 280 AEESSL 285
EE L
Sbjct: 375 GEEERL 380
>UNIPROTKB|F1MJI7 [details] [associations]
symbol:LMNB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005638 "lamin filament" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] InterPro:IPR001664 GO:GO:0005635
GO:GO:0005198 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 GO:GO:0005638 GeneTree:ENSGT00560000076873 OMA:HYIDRVR
EMBL:DAAA02019682 IPI:IPI00713660 Ensembl:ENSBTAT00000018110
Uniprot:F1MJI7
Length = 614
Score = 233 (87.1 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 57/146 (39%), Positives = 85/146 (58%)
Query: 40 GSVAPSKKRKLNILEE-------YESEERTSSG--FQVT--SSAKGNMEITEVDPDGKFV 88
G SK+++L + E S TSSG F + +SA G++ I E+D +G+FV
Sbjct: 420 GRPGRSKRKRLEVQEPPGTGSSGLGSSSSTSSGGSFHLAQQASASGSVSIEEIDLEGRFV 479
Query: 89 KLYNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPH 147
+L N ++QSLGNW++ R+V +GE + S+KF + AG TVTVW+ G H PP
Sbjct: 480 QLKNSSDKDQSLGNWRIKRQVLEGE-EISYKFTPKYVLRAGQTVTVWAAGA-GVAHSPPS 537
Query: 148 NIVMKNQK-FGSGDEISTILLNTDGE 172
+V K+Q +G+G+ T L+N DGE
Sbjct: 538 TLVWKSQNSWGTGESFRTTLVNADGE 563
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 29/83 (34%), Positives = 52/83 (62%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELME 262
+++ L+ +R +ELE+ + E+ KF +M E E+ ++ M +QL +Y+EL++
Sbjct: 310 QLSSLQKQASAAEDRIRELEETVAGERDKFRKMLDAKEREMMEVRDMMQQQLAEYQELLD 369
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EI+ YR L+E EE L
Sbjct: 370 VKLALDMEISAYRKLLEGEEERL 392
>UNIPROTKB|I3LC25 [details] [associations]
symbol:LMNB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005638 "lamin filament" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] InterPro:IPR001664 GO:GO:0005635
GO:GO:0005198 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 GO:GO:0005638 GeneTree:ENSGT00560000076873 OMA:HYIDRVR
EMBL:FP565569 EMBL:FP312673 Ensembl:ENSSSCT00000027018
Uniprot:I3LC25
Length = 630
Score = 233 (87.1 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 50/119 (42%), Positives = 75/119 (63%)
Query: 58 SEERTSSGFQVT--SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKV-QGEVK 114
S +SS F + +SA G++ I E+D +GKFV+L N ++QSLGNW++ R+V +GE +
Sbjct: 463 SSTSSSSSFHMAQQASASGSISIEEIDLEGKFVQLKNSSDKDQSLGNWRIKRQVLEGE-E 521
Query: 115 TSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
++KF + AG TVTVW+ G H PP +V K+Q +G+G T+L+N DGE
Sbjct: 522 IAYKFTPKYVLRAGQTVTVWAAGA-GVAHSPPSTLVWKSQNSWGTGGSFRTVLVNADGE 579
Score = 134 (52.2 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 29/83 (34%), Positives = 51/83 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELME 262
+++ L+ +R +ELE+ + E+ KF +M E E+ ++ M +QL +Y+EL++
Sbjct: 326 QLSSLQKQASAAEDRIRELEETMAGERDKFRKMLDAKEREMTEMRDVMQQQLAEYQELLD 385
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EI YR L+E EE L
Sbjct: 386 VKLALDMEINAYRKLLEGEEERL 408
>UNIPROTKB|Q03252 [details] [associations]
symbol:LMNB2 "Lamin-B2" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005638 "lamin filament" evidence=IEA] [GO:0005637 "nuclear
inner membrane" evidence=IEA] [GO:0005652 "nuclear lamina"
evidence=NAS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001664
GO:GO:0005198 Pathway_Interaction_DB:caspase_pathway GO:GO:0005882
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0005637
GO:GO:0005652 InterPro:IPR001322 Pfam:PF00932 EMBL:AC005624
eggNOG:NOG325506 KO:K07611 HOGENOM:HOG000007711 CTD:84823
OrthoDB:EOG4ZCT4D EMBL:BT007441 EMBL:AC011522 EMBL:BC006551
EMBL:M94362 EMBL:M94363 IPI:IPI00009771 RefSeq:NP_116126.3
UniGene:Hs.538286 PDB:2LLL PDBsum:2LLL ProteinModelPortal:Q03252
SMR:Q03252 DIP:DIP-57724N IntAct:Q03252 STRING:Q03252
PhosphoSite:Q03252 DMDM:23503078 REPRODUCTION-2DPAGE:IPI00009771
PaxDb:Q03252 PRIDE:Q03252 DNASU:84823 Ensembl:ENST00000582871
GeneID:84823 KEGG:hsa:84823 UCSC:uc002lvy.3 GeneCards:GC19M002428
HGNC:HGNC:6638 MIM:150341 MIM:608709 neXtProt:NX_Q03252
Orphanet:79087 PharmGKB:PA30404 InParanoid:Q03252 OMA:HYIDRVR
PhylomeDB:Q03252 ChiTaRS:LMNB2 GenomeRNAi:84823 NextBio:75028
Bgee:Q03252 CleanEx:HS_LMNB2 Genevestigator:Q03252
GermOnline:ENSG00000176619 Uniprot:Q03252
Length = 600
Score = 230 (86.0 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 54/144 (37%), Positives = 83/144 (57%)
Query: 40 GSVAPSKKRKLNILEEYESEERT-------SSGFQVT--SSAKGNMEITEVDPDGKFVKL 90
G + SK+++L + E S S GF + +SA G++ I E+D +GKFV+L
Sbjct: 409 GRLGRSKRKRLEVEEPLGSGPSVLGTGTGGSGGFHLAQQASASGSVSIEEIDLEGKFVQL 468
Query: 91 YNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNI 149
N ++QSLGNW++ R+V +GE + ++KF + AG VTVW+ G H PP +
Sbjct: 469 KNNSDKDQSLGNWRIKRQVLEGE-EIAYKFTPKYILRAGQMVTVWAAGA-GVAHSPPSTL 526
Query: 150 VMKNQK-FGSGDEISTILLNTDGE 172
V K Q +G+G+ T+L+N DGE
Sbjct: 527 VWKGQSSWGTGESFRTVLVNADGE 550
Score = 133 (51.9 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 220 ERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYR 275
+R +ELE+ + E+ KF +M E E+ ++ M +QL +Y+EL+++K+ LD+EI YR
Sbjct: 313 DRIRELEEAMAGERDKFRKMLDAKEQEMTEMRDVMQQQLAEYQELLDVKLALDMEINAYR 372
Query: 276 NLMEAEESSL 285
L+E EE L
Sbjct: 373 KLLEGEEERL 382
>UNIPROTKB|J9JID7 [details] [associations]
symbol:LMNB2 "Lamin B2, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 GO:GO:0005198 GO:GO:0005882 EMBL:CH471139
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322 Pfam:PF00932
EMBL:AC005624 KO:K07611 CTD:84823 EMBL:AC011522 RefSeq:NP_116126.3
GeneID:84823 KEGG:hsa:84823 HGNC:HGNC:6638 ChiTaRS:LMNB2
Ensembl:ENST00000325327 Uniprot:J9JID7
Length = 620
Score = 230 (86.0 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 54/144 (37%), Positives = 83/144 (57%)
Query: 40 GSVAPSKKRKLNILEEYESEERT-------SSGFQVT--SSAKGNMEITEVDPDGKFVKL 90
G + SK+++L + E S S GF + +SA G++ I E+D +GKFV+L
Sbjct: 429 GRLGRSKRKRLEVEEPLGSGPSVLGTGTGGSGGFHLAQQASASGSVSIEEIDLEGKFVQL 488
Query: 91 YNKGSEEQSLGNWQLVRKV-QGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNI 149
N ++QSLGNW++ R+V +GE + ++KF + AG VTVW+ G H PP +
Sbjct: 489 KNNSDKDQSLGNWRIKRQVLEGE-EIAYKFTPKYILRAGQMVTVWAAGA-GVAHSPPSTL 546
Query: 150 VMKNQK-FGSGDEISTILLNTDGE 172
V K Q +G+G+ T+L+N DGE
Sbjct: 547 VWKGQSSWGTGESFRTVLVNADGE 570
Score = 133 (51.9 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 220 ERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYR 275
+R +ELE+ + E+ KF +M E E+ ++ M +QL +Y+EL+++K+ LD+EI YR
Sbjct: 333 DRIRELEEAMAGERDKFRKMLDAKEQEMTEMRDVMQQQLAEYQELLDVKLALDMEINAYR 392
Query: 276 NLMEAEESSL 285
L+E EE L
Sbjct: 393 KLLEGEEERL 402
>UNIPROTKB|F1Q1E1 [details] [associations]
symbol:LMNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005638 "lamin filament" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR001664
GO:GO:0005635 GO:GO:0005198 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 GO:GO:0005638 GeneTree:ENSGT00560000076873 OMA:HYIDRVR
EMBL:AAEX03012597 Ensembl:ENSCAFT00000030822 Uniprot:F1Q1E1
Length = 539
Score = 228 (85.3 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 48/117 (41%), Positives = 71/117 (60%)
Query: 58 SEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKV-QGEVKTS 116
S TS +SA G + I E+D +G+FV+L N ++QSLGNW++ R+V +GE + +
Sbjct: 374 SSSTTSFHLAQQASASGGVSIEEIDLEGRFVQLKNSSDKDQSLGNWRIKRQVLEGE-EIA 432
Query: 117 FKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
+KF + AG TVTVW+ G H PP +V K Q +G+G+ T+L+N DGE
Sbjct: 433 YKFTPKYVLRAGQTVTVWAAGA-GVAHSPPSTLVWKTQNSWGTGESFRTVLVNADGE 488
Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 28/70 (40%), Positives = 47/70 (67%)
Query: 220 ERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYR 275
+R +ELE+ + E+ KF +M E E+ ++ M +QL +Y+EL+++K+ LD+EI+ YR
Sbjct: 248 DRIRELEETMAGERDKFRKMLDAKEQEMTEMRDVMQQQLAEYQELLDVKLALDMEISAYR 307
Query: 276 NLMEAEESSL 285
L+E EE L
Sbjct: 308 KLLEGEEERL 317
>ZFIN|ZDB-GENE-020424-2 [details] [associations]
symbol:lmnb1 "lamin B1" species:7955 "Danio rerio"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 ZFIN:ZDB-GENE-020424-2 GO:GO:0005198
GO:GO:0005882 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 GeneTree:ENSGT00560000076873 EMBL:CR396586
IPI:IPI00611213 Ensembl:ENSDART00000124502 ArrayExpress:F1Q5F3
Bgee:F1Q5F3 Uniprot:F1Q5F3
Length = 603
Score = 225 (84.3 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 49/136 (36%), Positives = 81/136 (59%)
Query: 38 SRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEE 97
S SV ++ ++ + E ESE +S ++SA GN+ I E+D DGKF++L+N ++
Sbjct: 421 SSRSVRTTRGKRKRVDVE-ESEASSSVSIAHSASATGNVSIDELDVDGKFIRLHNNSEQD 479
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KF 156
Q + +QL R + GEV ++KF ++AG VT+W+ N G + PP +++ KNQ +
Sbjct: 480 QPMAGFQLTRTI-GEVTATYKFTAKYNLKAGQKVTIWASNA-GISSNPPADLIWKNQPSW 537
Query: 157 GSGDEISTILLNTDGE 172
G+G+ I LL+ GE
Sbjct: 538 GTGENIKVALLSPAGE 553
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 201 SGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYREL 260
+G+ E RA R+ E L + + + A E EI ++ +M +QL +Y +L
Sbjct: 320 AGQLANLQKEARAWQDRINELEGALSHEKDLSRRLLAEKEREIAEIRAKMQQQLDEYEQL 379
Query: 261 MEIKINLDVEIAQYRNLMEAEESSL 285
+++K+ LD+EI YR L+E EE L
Sbjct: 380 LDVKLALDMEINAYRKLLEGEEERL 404
>ZFIN|ZDB-GENE-990630-13 [details] [associations]
symbol:lmnb2 "lamin B2" species:7955 "Danio rerio"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005882
"intermediate filament" evidence=IEA] InterPro:IPR001664
ZFIN:ZDB-GENE-990630-13 GO:GO:0005635 GO:GO:0005198 GO:GO:0005882
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 HSSP:P02545 EMBL:AJ005936 IPI:IPI00513243
UniGene:Dr.75473 ProteinModelPortal:Q9W6T5 SMR:Q9W6T5 STRING:Q9W6T5
PRIDE:Q9W6T5 InParanoid:Q9W6T5 NextBio:20806660 ArrayExpress:Q9W6T5
Bgee:Q9W6T5 Uniprot:Q9W6T5
Length = 583
Score = 217 (81.4 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 50/136 (36%), Positives = 79/136 (58%)
Query: 38 SRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEE 97
S S + KRK LEE S + + A G++ I E+D +GK V L N ++
Sbjct: 403 SASSRSSRAKRKRVELEE-SSTAGPKAQISQQAEASGSVSIEEIDLEGKSVTLRNNSDKD 461
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-F 156
QSLG+W+L R++ + +KF ++AG TVTVWS + G +H PP +++ K+Q +
Sbjct: 462 QSLGSWRLKRQIGDGEEIVYKFSPKFVLKAGQTVTVWSADA-GMSHSPPSDLLWKSQSSW 520
Query: 157 GSGDEISTILLNTDGE 172
G+G+ I T+L+N+ GE
Sbjct: 521 GTGENILTLLVNSSGE 536
Score = 126 (49.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 27/70 (38%), Positives = 44/70 (62%)
Query: 220 ERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYR 275
ER +ELE + ++ K+ R E E+ ++ M +QL +Y+EL+++K+ LD+EI YR
Sbjct: 313 ERIRELEGLLSSDRDKYRRQLDAKEREMAEMRECMQQQLNEYQELLDVKLALDMEINAYR 372
Query: 276 NLMEAEESSL 285
L+E EE L
Sbjct: 373 KLLEGEEDRL 382
Score = 37 (18.1 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 36 TPSRGSVA--PSKKRKLNILEEYE 57
TPSR S A P +++ L+E E
Sbjct: 5 TPSRASAAQTPLSPARISRLQEKE 28
>UNIPROTKB|H7C5W5 [details] [associations]
symbol:PRPH "Peripherin" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 GO:GO:0005198 GO:GO:0005882 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
EMBL:AC125611 HGNC:HGNC:9461 Ensembl:ENST00000532332 Uniprot:H7C5W5
Length = 200
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 37/88 (42%), Positives = 58/88 (65%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ LR N L + +ELE+Q E Q+ AR+E E+++L+ EM L++Y+EL+
Sbjct: 54 EVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKEEMARHLREYQELLN 113
Query: 263 IKINLDVEIAQYRNLMEAEES--SLPTY 288
+K+ LD+EIA YR L+E EES S+P +
Sbjct: 114 VKMALDIEIATYRKLLEGEESRISVPVH 141
>WB|WBGene00003052 [details] [associations]
symbol:lmn-1 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA;IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0007067 "mitosis" evidence=IMP] [GO:0051301 "cell
division" evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0071688
"striated muscle myosin thick filament assembly" evidence=IMP]
[GO:0007050 "cell cycle arrest" evidence=IMP] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0051983
"regulation of chromosome segregation" evidence=IMP] [GO:0031081
"nuclear pore distribution" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0005638 "lamin filament" evidence=ISS]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0034399 "nuclear periphery"
evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] InterPro:IPR001664 GO:GO:0008340
GO:GO:0009792 GO:GO:0007346 GO:GO:0005635 GO:GO:0007067
GO:GO:0002119 GO:GO:0005198 GO:GO:0008284 GO:GO:0071688
GO:GO:0010171 GO:GO:0040011 GO:GO:0007050 GO:GO:0000910
GO:GO:0040035 GO:GO:0007281 InterPro:IPR016044 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0042393 GO:GO:0005637
GO:GO:0051983 InterPro:IPR001322 Pfam:PF00932 GO:GO:0031081
GO:GO:0005638 eggNOG:NOG325506 GeneTree:ENSGT00560000076873
KO:K07611 OMA:LWEENDD EMBL:X74027 EMBL:Z96047 PIR:S42257 PIR:T20390
RefSeq:NP_492371.1 ProteinModelPortal:Q21443 SMR:Q21443
DIP:DIP-26491N DIP:DIP-29640N IntAct:Q21443 MINT:MINT-1129135
STRING:Q21443 PaxDb:Q21443 EnsemblMetazoa:DY3.2.1
EnsemblMetazoa:DY3.2.2 GeneID:172687 KEGG:cel:CELE_DY3.2
UCSC:DY3.2.1 CTD:172687 WormBase:DY3.2 HOGENOM:HOG000019623
InParanoid:Q21443 NextBio:876585 Uniprot:Q21443
Length = 566
Score = 186 (70.5 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 42/127 (33%), Positives = 72/127 (56%)
Query: 46 KKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQL 105
++R +++ E + + + ++ G + I EVD +GK+V++ N EEQS+G ++L
Sbjct: 417 RRRVVDVNGEDQDIDYLNRRSKLNKETVGPVGIDEVDEEGKWVRVANNSEEEQSIGGYKL 476
Query: 106 VRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTI 165
V K G + SF+F +K+ + TVWS + GA H PP VMK Q++ GD S
Sbjct: 477 VVKA-GNKEASFQFSSRMKLAPHASATVWSADA-GAVHHPPEVYVMKKQQWPIGDNPSAR 534
Query: 166 LLNTDGE 172
L +++G+
Sbjct: 535 LEDSEGD 541
>UNIPROTKB|Q21443 [details] [associations]
symbol:lmn-1 "Lamin-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001664 GO:GO:0008340 GO:GO:0009792 GO:GO:0007346
GO:GO:0005635 GO:GO:0007067 GO:GO:0002119 GO:GO:0005198
GO:GO:0008284 GO:GO:0071688 GO:GO:0010171 GO:GO:0040011
GO:GO:0007050 GO:GO:0000910 GO:GO:0040035 GO:GO:0007281
InterPro:IPR016044 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0042393 GO:GO:0005637 GO:GO:0051983 InterPro:IPR001322
Pfam:PF00932 GO:GO:0031081 GO:GO:0005638 eggNOG:NOG325506
GeneTree:ENSGT00560000076873 KO:K07611 OMA:LWEENDD EMBL:X74027
EMBL:Z96047 PIR:S42257 PIR:T20390 RefSeq:NP_492371.1
ProteinModelPortal:Q21443 SMR:Q21443 DIP:DIP-26491N DIP:DIP-29640N
IntAct:Q21443 MINT:MINT-1129135 STRING:Q21443 PaxDb:Q21443
EnsemblMetazoa:DY3.2.1 EnsemblMetazoa:DY3.2.2 GeneID:172687
KEGG:cel:CELE_DY3.2 UCSC:DY3.2.1 CTD:172687 WormBase:DY3.2
HOGENOM:HOG000019623 InParanoid:Q21443 NextBio:876585
Uniprot:Q21443
Length = 566
Score = 186 (70.5 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 42/127 (33%), Positives = 72/127 (56%)
Query: 46 KKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQL 105
++R +++ E + + + ++ G + I EVD +GK+V++ N EEQS+G ++L
Sbjct: 417 RRRVVDVNGEDQDIDYLNRRSKLNKETVGPVGIDEVDEEGKWVRVANNSEEEQSIGGYKL 476
Query: 106 VRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTI 165
V K G + SF+F +K+ + TVWS + GA H PP VMK Q++ GD S
Sbjct: 477 VVKA-GNKEASFQFSSRMKLAPHASATVWSADA-GAVHHPPEVYVMKKQQWPIGDNPSAR 534
Query: 166 LLNTDGE 172
L +++G+
Sbjct: 535 LEDSEGD 541
>WB|WBGene00002050 [details] [associations]
symbol:ifa-1 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0007126 "meiosis"
evidence=IMP] [GO:0005882 "intermediate filament" evidence=IDA]
InterPro:IPR001664 GO:GO:0009792 GO:GO:0007126 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0005198 GO:GO:0005882
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322 Pfam:PF00932
EMBL:Z50045 EMBL:Z73423 GeneID:181316 KEGG:cel:CELE_F38B2.1
CTD:181316 GeneTree:ENSGT00560000076873 InterPro:IPR016451
PANTHER:PTHR23239:SF13 PIRSF:PIRSF005546 RefSeq:NP_001257139.1
ProteinModelPortal:G5ECT5 SMR:G5ECT5 EnsemblMetazoa:F38B2.1d
WormBase:F38B2.1d OMA:DIREEYD Uniprot:G5ECT5
Length = 592
Score = 186 (70.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 39/117 (33%), Positives = 65/117 (55%)
Query: 57 ESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKT 115
+ E + FQ SAKGN+ I E PDGKF+ L N ++++++G W+L R++ G+ +
Sbjct: 467 KGETASRQSFQ--RSAKGNVSIHEASPDGKFIVLQNTHRAKDEAIGEWKLKRRIDGKREN 524
Query: 116 SFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
+ R + AG T+ +++ N +G P + FGSG+ + TIL N +GE
Sbjct: 525 VYTLPRDFVLRAGKTLKIFARN-QGVASPPDQLVYDAEDSFGSGNNVQTILFNKEGE 580
>WB|WBGene00002052 [details] [associations]
symbol:ifa-4 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=ISS]
InterPro:IPR001664 GO:GO:0005737 GO:GO:0005198 GO:GO:0005882
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322 Pfam:PF00932
GeneTree:ENSGT00560000076873 HOGENOM:HOG000017007
InterPro:IPR016451 PANTHER:PTHR23239:SF13 PIRSF:PIRSF005546
EMBL:X70833 EMBL:FO081589 PIR:S46329 RefSeq:NP_508836.4
ProteinModelPortal:P90900 SMR:P90900 DIP:DIP-24430N IntAct:P90900
MINT:MINT-115979 STRING:P90900 PaxDb:P90900
EnsemblMetazoa:K05B2.3.1 EnsemblMetazoa:K05B2.3.2 GeneID:180765
KEGG:cel:CELE_K05B2.3 UCSC:K05B2.3 CTD:180765 WormBase:K05B2.3
eggNOG:NOG293180 InParanoid:P90900 OMA:ILMVELQ NextBio:910844
Uniprot:P90900
Length = 577
Score = 182 (69.1 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 38/112 (33%), Positives = 66/112 (58%)
Query: 62 TSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHR 121
T+S + SAKGN+ I E +P GK++ L N ++++G+W+L RK+ G+ + F F R
Sbjct: 456 TTSHSSYSRSAKGNIAIQEAEPSGKYIVLENISRRDENIGDWKLRRKIAGKREIVFTFPR 515
Query: 122 TLKIEAGGTVTVWSFNVEGATHEPPHNIVMK-NQKFGSGDEISTILLNTDGE 172
+ A +V +++ +G H PP ++V FG+G+++ T L N +GE
Sbjct: 516 EFTLRAQKSVKIFARG-QGV-HSPPDSLVYDLEDSFGTGNDVVTTLYNKEGE 565
>UNIPROTKB|H9KZP4 [details] [associations]
symbol:LOC426897 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0045095 "keratin filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095 PANTHER:PTHR23239:SF18
GeneTree:ENSGT00650000093312 EMBL:AADN02076545 EMBL:AADN02076546
Ensembl:ENSGALT00000016666 OMA:INISVCH Uniprot:H9KZP4
Length = 178
Score = 130 (50.8 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 220 ERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLME 279
E+ KE+ I+ +SK +EA +++ + ++ QL +++ELM IK+ LDVEI Y+ L+E
Sbjct: 92 EQRKEMS--IKDAKSKLTELEAALQKAKQDLARQLWEFQELMNIKLALDVEITTYKKLLE 149
Query: 280 AEESSL 285
EES L
Sbjct: 150 GEESRL 155
Score = 45 (20.9 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 16/66 (24%), Positives = 29/66 (43%)
Query: 51 NILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQ 110
N+ YE + S + + KG + +V L K E L ++V+K+
Sbjct: 15 NVKAHYE-DTACRSRAETEAWCKGKFKELQVTAGRNADSLQEKKREAAELA--RMVKKLS 71
Query: 111 GEVKTS 116
GEV+++
Sbjct: 72 GEVRSA 77
>UNIPROTKB|F1N8X2 [details] [associations]
symbol:LOC415464 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 GO:GO:0005635 GO:GO:0048471 GO:GO:0042981
GO:GO:0005198 GO:GO:0071456 GO:GO:0030334 GO:GO:0006998
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0030951 InterPro:IPR001322
Pfam:PF00932 GO:GO:0005638 GeneTree:ENSGT00560000076873
GO:GO:0090343 GO:GO:0035105 EMBL:AADN02041564 IPI:IPI00588634
Ensembl:ENSGALT00000009815 OMA:RRKKKCC Uniprot:F1N8X2
Length = 588
Score = 177 (67.4 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 41/119 (34%), Positives = 64/119 (53%)
Query: 63 SSGFQVT--SSAKGNMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQGEVKTSFKFH 120
S+GF+ +S+ G + I E+D DG FV+L N E+Q L W L R ++ ++KF
Sbjct: 429 SAGFKTVQHASSSGKVSIEEIDADGNFVRLKNNSDEDQPLHGWVLRRHLESVSDVAYKFP 488
Query: 121 RTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE-LANQE 177
++AG VT+W P ++V K+QK +GSG I L+ +GE LA ++
Sbjct: 489 SQFTLQAGQVVTIWG--AAAGVSPGPSDLVWKSQKSWGSGFNIGVTLITDEGEELAERK 545
Score = 143 (55.4 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 29/90 (32%), Positives = 54/90 (60%)
Query: 200 RSGKYDTEMNELRAANYRLTERNKELEDQIEYEQS----KFARMEAEIKRLQTEMTEQLK 255
R G +E+N ++ N L + KEL++ ++ ++ + A E E+ + Q ++ EQL+
Sbjct: 302 RVGNLTSEINHYQSQNAALENKVKELQEMLDKDRDLHRRRMAEKEKEMAQTQKKVQEQLE 361
Query: 256 DYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+Y L+++K+ LD+EI YR ++E EE L
Sbjct: 362 EYEHLLDVKLALDLEINAYRKMLEGEEQRL 391
>UNIPROTKB|E1B8N6 [details] [associations]
symbol:LMNB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043274 "phospholipase binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005638 "lamin
filament" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 GO:GO:0005635 GO:GO:0005654
GO:GO:0005198 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 GO:GO:0005638 GeneTree:ENSGT00560000076873 OMA:QKESRAC
EMBL:DAAA02019796 EMBL:DAAA02019797 EMBL:DAAA02019798
IPI:IPI00701266 Ensembl:ENSBTAT00000052423 Uniprot:E1B8N6
Length = 585
Score = 176 (67.0 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 42/143 (29%), Positives = 77/143 (53%)
Query: 38 SRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSEE 97
S SV ++ ++ + E ESE +S ++SA GN+ I E+D DGKF++L N ++
Sbjct: 405 SSRSVRTTRGKRKRVDVE-ESEASSSVSISHSASATGNVCIEEIDVDGKFIRLKNTSEQD 463
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFG 157
Q +G W+++RK+ G+ S+K+ ++AG TVTV ++ + PP ++ ++G
Sbjct: 464 QPMGGWEMIRKI-GDTSVSYKYTSRYVLKAGQTVTVSGPSIGVSASAPPDSMWKVRNEWG 522
Query: 158 SGDEISTILLNTDGELANQERII 180
G + +L + E Q +
Sbjct: 523 -GMLVGVLLRGSCAEEVAQRSTV 544
Score = 143 (55.4 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELM 261
++++ L+ + ER +ELED + E+ RM E E+ ++ +M +QL DY +L+
Sbjct: 305 SQLSNLQKESRACLERIQELEDLLAKERDNSRRMLSDKEREMAEIRDQMQQQLNDYEQLL 364
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
++K+ LD+EI+ YR L+E EE L
Sbjct: 365 DVKLALDMEISAYRKLLEGEEERL 388
>UNIPROTKB|P17661 [details] [associations]
symbol:DES "Desmin" species:9606 "Homo sapiens" [GO:0005882
"intermediate filament" evidence=IEA] [GO:0005916 "fascia adherens"
evidence=IEA] [GO:0031594 "neuromuscular junction" evidence=IEA]
[GO:0042383 "sarcolemma" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005200 "structural constituent of
cytoskeleton" evidence=TAS] [GO:0007010 "cytoskeleton organization"
evidence=TAS] [GO:0008016 "regulation of heart contraction"
evidence=TAS] [GO:0006936 "muscle contraction" evidence=TAS]
[GO:0030018 "Z disc" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0030049 "muscle filament sliding" evidence=TAS]
[GO:0008092 "cytoskeletal protein binding" evidence=IPI]
InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732 GO:GO:0005829
GO:GO:0007010 GO:GO:0030018 Pathway_Interaction_DB:aurora_b_pathway
GO:GO:0005200 GO:GO:0031594 GO:GO:0005882 GO:GO:0008016
GO:GO:0042383 Orphanet:154 Reactome:REACT_17044 GO:GO:0030049
GO:GO:0005916 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
CTD:1674 eggNOG:NOG147125 KO:K07610 OMA:SSEMHSK OrthoDB:EOG4H9XKM
EMBL:M63391 EMBL:U59167 EMBL:AF055081 EMBL:AF055082 EMBL:AF055083
EMBL:AF137053 EMBL:AF486807 EMBL:AF487828 EMBL:AF521879
EMBL:AF527578 EMBL:AY083345 EMBL:AY114212 EMBL:AY125465
EMBL:BC032116 EMBL:AJ132926 IPI:IPI00465084 PIR:JE0063
RefSeq:NP_001918.3 UniGene:Hs.594952 ProteinModelPortal:P17661
SMR:P17661 IntAct:P17661 MINT:MINT-215829 STRING:P17661
PhosphoSite:P17661 DMDM:6686280 REPRODUCTION-2DPAGE:IPI00465084
REPRODUCTION-2DPAGE:P17661 SWISS-2DPAGE:P17661 UCD-2DPAGE:P17661
PaxDb:P17661 PRIDE:P17661 DNASU:1674 Ensembl:ENST00000373960
GeneID:1674 KEGG:hsa:1674 UCSC:uc002vll.3 GeneCards:GC02P220283
HGNC:HGNC:2770 HPA:CAB000034 HPA:HPA018803 MIM:125660 MIM:181400
MIM:601419 MIM:604765 neXtProt:NX_P17661 Orphanet:34517
Orphanet:98909 Orphanet:85146 PharmGKB:PA27253 InParanoid:P17661
PhylomeDB:P17661 ChiTaRS:DES GenomeRNAi:1674 NextBio:6888
ArrayExpress:P17661 Bgee:P17661 Genevestigator:P17661
GermOnline:ENSG00000175084 GO:GO:0045098 Uniprot:P17661
Length = 470
Score = 172 (65.6 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 40/93 (43%), Positives = 58/93 (62%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+ EM L++Y++
Sbjct: 331 YTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKDEMARHLREYQD 390
Query: 260 LMEIKINLDVEIAQYRNLMEAEES--SLP--TY 288
L+ +K+ LDVEIA YR L+E EES +LP TY
Sbjct: 391 LLNVKMALDVEIATYRKLLEGEESRINLPIQTY 423
>UNIPROTKB|Q8N9Z9 [details] [associations]
symbol:IFLTD1 "Intermediate filament tail domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005882 "intermediate
filament" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] InterPro:IPR001664 GO:GO:0005737
GO:GO:0005635 GO:GO:0005198 GO:GO:0008283 GO:GO:0005882
EMBL:CH471094 PANTHER:PTHR23239 InterPro:IPR001322 Pfam:PF00932
EMBL:AK093323 EMBL:AK296816 EMBL:AK302292 EMBL:AK310411
EMBL:AC022367 EMBL:BC037957 IPI:IPI00167858 IPI:IPI00792266
IPI:IPI00923576 IPI:IPI00923584 IPI:IPI00973558
RefSeq:NP_001139199.1 RefSeq:NP_001139200.1 RefSeq:NP_001139201.1
RefSeq:NP_001243195.1 RefSeq:NP_689803.2 UniGene:Hs.44647
HSSP:P02545 ProteinModelPortal:Q8N9Z9 SMR:Q8N9Z9 STRING:Q8N9Z9
PhosphoSite:Q8N9Z9 DMDM:296434538 PRIDE:Q8N9Z9
Ensembl:ENST00000282881 Ensembl:ENST00000413632
Ensembl:ENST00000445693 Ensembl:ENST00000458174
Ensembl:ENST00000539744 GeneID:160492 KEGG:hsa:160492
UCSC:uc001rgs.2 UCSC:uc009zjc.2 UCSC:uc010sji.1 UCSC:uc010sjj.2
CTD:160492 GeneCards:GC12M025564 HGNC:HGNC:26683 HPA:HPA045911
neXtProt:NX_Q8N9Z9 PharmGKB:PA162391895 eggNOG:NOG278780
HOGENOM:HOG000113053 HOVERGEN:HBG071391 InParanoid:Q8N9Z9
OMA:FLPNIVM OrthoDB:EOG4WDDCD PhylomeDB:Q8N9Z9 GenomeRNAi:160492
NextBio:87972 ArrayExpress:Q8N9Z9 Bgee:Q8N9Z9 CleanEx:HS_IFLTD1
Genevestigator:Q8N9Z9 Uniprot:Q8N9Z9
Length = 388
Score = 170 (64.9 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 40/108 (37%), Positives = 64/108 (59%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G++EI EV+ G FVKL N +E ++G+ L + V G+ + ++F + +
Sbjct: 139 QFTSSSLGDVEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVM 198
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q KF + + TIL +G+
Sbjct: 199 QANSTVTVWAAASE-AKHQPPSDFLWKEQDKFRASPDCITILCKPNGQ 245
>MGI|MGI:94885 [details] [associations]
symbol:Des "desmin" species:10090 "Mus musculus" [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0005200
"structural constituent of cytoskeleton" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IDA] [GO:0005882 "intermediate filament"
evidence=IDA] [GO:0005916 "fascia adherens" evidence=IDA]
[GO:0005921 "gap junction" evidence=ISO] [GO:0007517 "muscle organ
development" evidence=TAS] [GO:0008092 "cytoskeletal protein
binding" evidence=ISO] [GO:0030018 "Z disc" evidence=ISO;IDA]
[GO:0031594 "neuromuscular junction" evidence=IDA] [GO:0042383
"sarcolemma" evidence=IDA] [GO:0043292 "contractile fiber"
evidence=IDA] [GO:0045098 "type III intermediate filament"
evidence=ISO] InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732
MGI:MGI:94885 GO:GO:0030018 GO:GO:0005856 GO:GO:0005200
GO:GO:0031594 GO:GO:0042383 GO:GO:0007517 GO:GO:0005916
HOGENOM:HOG000230977 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
CTD:1674 eggNOG:NOG147125 KO:K07610 OMA:SSEMHSK OrthoDB:EOG4H9XKM
GO:GO:0045098 EMBL:L22550 EMBL:BC031760 EMBL:Z18892 IPI:IPI00130102
PIR:A54104 RefSeq:NP_034173.1 UniGene:Mm.6712
ProteinModelPortal:P31001 SMR:P31001 DIP:DIP-256N IntAct:P31001
MINT:MINT-220806 STRING:P31001 PhosphoSite:P31001
SWISS-2DPAGE:P31001 PaxDb:P31001 PRIDE:P31001
Ensembl:ENSMUST00000027409 GeneID:13346 KEGG:mmu:13346
InParanoid:P31001 NextBio:283662 PMAP-CutDB:P31001 Bgee:P31001
CleanEx:MM_DES Genevestigator:P31001 GermOnline:ENSMUSG00000026208
Uniprot:P31001
Length = 469
Score = 171 (65.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 36/86 (41%), Positives = 54/86 (62%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+ EM L++Y++
Sbjct: 330 YTCEIDALKGTNDSLMRQMRELEDRFASEANGYQDNIARLEEEIRHLKDEMARHLREYQD 389
Query: 260 LMEIKINLDVEIAQYRNLMEAEESSL 285
L+ +K+ LDVEIA YR L+E EES +
Sbjct: 390 LLNVKMALDVEIATYRKLLEGEESRI 415
>RGD|620686 [details] [associations]
symbol:Des "desmin" species:10116 "Rattus norvegicus" [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0005622
"intracellular" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=ISO] [GO:0005882 "intermediate
filament" evidence=IEA;ISO] [GO:0005916 "fascia adherens"
evidence=IEA;ISO] [GO:0005921 "gap junction" evidence=IDA]
[GO:0008092 "cytoskeletal protein binding" evidence=IEA;ISO]
[GO:0030018 "Z disc" evidence=IEA;ISO] [GO:0031594 "neuromuscular
junction" evidence=IEA;ISO] [GO:0042383 "sarcolemma"
evidence=IEA;ISO] [GO:0043292 "contractile fiber" evidence=ISO]
[GO:0045098 "type III intermediate filament" evidence=IDA]
InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732 RGD:620686
GO:GO:0030018 GO:GO:0005198 GO:GO:0031594 GO:GO:0042383
GO:GO:0005916 HOGENOM:HOG000230977 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0005921 CTD:1674
eggNOG:NOG147125 KO:K07610 OrthoDB:EOG4H9XKM GO:GO:0045098
EMBL:X73524 IPI:IPI00421517 PIR:I52469 RefSeq:NP_071976.1
UniGene:Rn.39196 ProteinModelPortal:P48675 SMR:P48675 IntAct:P48675
STRING:P48675 PhosphoSite:P48675 PRIDE:P48675 GeneID:64362
KEGG:rno:64362 UCSC:RGD:620686 InParanoid:P48675 NextBio:613070
ArrayExpress:P48675 Genevestigator:P48675
GermOnline:ENSRNOG00000019810 Uniprot:P48675
Length = 469
Score = 171 (65.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 36/86 (41%), Positives = 54/86 (62%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+ EM L++Y++
Sbjct: 330 YTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKDEMARHLREYQD 389
Query: 260 LMEIKINLDVEIAQYRNLMEAEESSL 285
L+ +K+ LDVEIA YR L+E EES +
Sbjct: 390 LLNVKMALDVEIATYRKLLEGEESRI 415
>UNIPROTKB|Q6P725 [details] [associations]
symbol:Des "Desmin" species:10116 "Rattus norvegicus"
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732 RGD:620686
GO:GO:0030018 GO:GO:0005198 GO:GO:0031594 GO:GO:0005882
GO:GO:0042383 GO:GO:0005916 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GeneTree:ENSGT00660000095344 OMA:SSEMHSK IPI:IPI00421517
UniGene:Rn.39196 EMBL:CH474004 EMBL:BC061872 SMR:Q6P725
STRING:Q6P725 Ensembl:ENSRNOT00000026860 InParanoid:Q6P725
Genevestigator:Q6P725 Uniprot:Q6P725
Length = 469
Score = 171 (65.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 36/86 (41%), Positives = 54/86 (62%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+ EM L++Y++
Sbjct: 330 YTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKDEMARHLREYQD 389
Query: 260 LMEIKINLDVEIAQYRNLMEAEESSL 285
L+ +K+ LDVEIA YR L+E EES +
Sbjct: 390 LLNVKMALDVEIATYRKLLEGEESRI 415
>UNIPROTKB|O62654 [details] [associations]
symbol:DES "Desmin" species:9913 "Bos taurus" [GO:0042383
"sarcolemma" evidence=IEA] [GO:0031594 "neuromuscular junction"
evidence=IEA] [GO:0030018 "Z disc" evidence=IEA] [GO:0008092
"cytoskeletal protein binding" evidence=IEA] [GO:0005916 "fascia
adherens" evidence=IEA] [GO:0005882 "intermediate filament"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732
GO:GO:0030018 GO:GO:0005198 GO:GO:0031594 GO:GO:0005882
GO:GO:0042383 GO:GO:0005916 HOGENOM:HOG000230977 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 EMBL:AB011675 EMBL:AB011673
EMBL:BC133410 IPI:IPI00905865 RefSeq:NP_001075044.1 UniGene:Bt.6141
ProteinModelPortal:O62654 SMR:O62654 STRING:O62654 PRIDE:O62654
Ensembl:ENSBTAT00000007041 GeneID:280765 KEGG:bta:280765 CTD:1674
eggNOG:NOG147125 GeneTree:ENSGT00660000095344 KO:K07610 OMA:SSEMHSK
NextBio:20804930 ArrayExpress:O62654 Uniprot:O62654
Length = 470
Score = 171 (65.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 36/86 (41%), Positives = 54/86 (62%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+ EM L++Y++
Sbjct: 331 YTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKDEMARHLREYQD 390
Query: 260 LMEIKINLDVEIAQYRNLMEAEESSL 285
L+ +K+ LDVEIA YR L+E EES +
Sbjct: 391 LLNVKMALDVEIATYRKLLEGEESRI 416
>UNIPROTKB|P02540 [details] [associations]
symbol:DES "Desmin" species:9823 "Sus scrofa" [GO:0042383
"sarcolemma" evidence=IEA] [GO:0031594 "neuromuscular junction"
evidence=IEA] [GO:0030018 "Z disc" evidence=IEA] [GO:0008092
"cytoskeletal protein binding" evidence=IEA] [GO:0005916 "fascia
adherens" evidence=IEA] [GO:0005882 "intermediate filament"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732
GO:GO:0030018 GO:GO:0005198 GO:GO:0031594 GO:GO:0005882
GO:GO:0042383 GO:GO:0005916 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
CTD:1674 GeneTree:ENSGT00660000095344 KO:K07610 OMA:SSEMHSK
EMBL:AB011676 EMBL:AB011674 EMBL:AF136188 EMBL:AF363284 PIR:A02955
RefSeq:NP_001001535.1 UniGene:Ssc.24 ProteinModelPortal:P02540
SMR:P02540 PRIDE:P02540 Ensembl:ENSSSCT00000030104 GeneID:396725
KEGG:ssc:396725 Uniprot:P02540
Length = 471
Score = 171 (65.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 36/86 (41%), Positives = 54/86 (62%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + +ELED+ E Q AR+E EI+ L+ EM L++Y++
Sbjct: 332 YTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKDEMARHLREYQD 391
Query: 260 LMEIKINLDVEIAQYRNLMEAEESSL 285
L+ +K+ LDVEIA YR L+E EES +
Sbjct: 392 LLNVKMALDVEIATYRKLLEGEESRI 417
>UNIPROTKB|I3L7H4 [details] [associations]
symbol:IFLTD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 GO:GO:0005737 GO:GO:0005635
GO:GO:0005198 GO:GO:0008283 PANTHER:PTHR23239 InterPro:IPR001322
Pfam:PF00932 OMA:FLPNIVM GeneTree:ENSGT00450000040420 EMBL:CU928089
EMBL:FP578991 Ensembl:ENSSSCT00000032039 Uniprot:I3L7H4
Length = 423
Score = 170 (64.9 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 41/108 (37%), Positives = 64/108 (59%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q SSA G+++I EV+ G FVKL N +E +GN+ L + V G+ + ++F + +
Sbjct: 171 QSRSSALGDVKIAEVNVKGLFVKLINSSLDKELEIGNYILQQNVDGQRVSLYQFLPDIIM 230
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + K Q +F +G +TIL +GE
Sbjct: 231 QANSTVTVWAAASE-AKHQPPSDFLWKEQNRFRTGPSCTTILCKPNGE 277
>UNIPROTKB|F1PGH6 [details] [associations]
symbol:PRPH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 InterPro:IPR006821
Pfam:PF04732 PRINTS:PR01248 GO:GO:0005198 GO:GO:0005882
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GeneTree:ENSGT00660000095344
OMA:VVETFLY EMBL:AAEX03015069 EMBL:AAEX03015068
Ensembl:ENSCAFT00000013680 Uniprot:F1PGH6
Length = 467
Score = 169 (64.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 37/88 (42%), Positives = 58/88 (65%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ LR N L + +ELE+Q E Q+ AR+E E+++L+ EM L++Y+EL+
Sbjct: 322 EVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKEEMARHLREYQELLN 381
Query: 263 IKINLDVEIAQYRNLMEAEES--SLPTY 288
+K+ LD+EIA YR L+E EES S+P +
Sbjct: 382 VKMALDIEIATYRKLLEGEESRISVPVH 409
Score = 36 (17.7 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 90 LYNKGSEEQSLGNWQLVRKVQG---EVKTSFKFH 120
L+ K ++ +L +L RK++ E++ K H
Sbjct: 196 LFRKDVDDATLSRLELERKIESLMDEIEFLKKLH 229
>UNIPROTKB|A6QQJ3 [details] [associations]
symbol:PRPH "Peripherin" species:9913 "Bos taurus"
[GO:0045104 "intermediate filament cytoskeleton organization"
evidence=IEA] [GO:0044299 "C-fiber" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0005883
"neurofilament" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] InterPro:IPR001664 InterPro:IPR002957
InterPro:IPR006821 Pfam:PF04732 PRINTS:PR01248 GO:GO:0005198
HOGENOM:HOG000230977 HOVERGEN:HBG013015 GO:GO:0005883
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045104 GO:GO:0042622
GeneTree:ENSGT00660000095344 EMBL:BC149862 IPI:IPI00867123
RefSeq:NP_001095848.1 UniGene:Bt.30375 ProteinModelPortal:A6QQJ3
SMR:A6QQJ3 STRING:A6QQJ3 Ensembl:ENSBTAT00000023744 GeneID:510082
KEGG:bta:510082 CTD:5630 eggNOG:NOG282699 InParanoid:A6QQJ3
KO:K07607 OMA:ESHKEQR OrthoDB:EOG4JWVDP NextBio:20869268
GO:GO:0044299 Uniprot:A6QQJ3
Length = 469
Score = 169 (64.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 37/88 (42%), Positives = 58/88 (65%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ LR N L + +ELE+Q E Q+ AR+E E+++L+ EM L++Y+EL+
Sbjct: 324 EVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKEEMARHLREYQELLN 383
Query: 263 IKINLDVEIAQYRNLMEAEES--SLPTY 288
+K+ LD+EIA YR L+E EES S+P +
Sbjct: 384 VKMALDIEIATYRKLLEGEESRISVPVH 411
Score = 36 (17.7 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 90 LYNKGSEEQSLGNWQLVRKVQG---EVKTSFKFH 120
L+ K ++ +L +L RK++ E++ K H
Sbjct: 198 LFRKDVDDATLSRLELERKIESLMDEIEFLKKLH 231
>UNIPROTKB|P41219 [details] [associations]
symbol:PRPH "Peripherin" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005883 "neurofilament" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044299
"C-fiber" evidence=IEA] [GO:0045104 "intermediate filament
cytoskeleton organization" evidence=IEA] [GO:0005882 "intermediate
filament" evidence=TAS] InterPro:IPR001664 InterPro:IPR002957
InterPro:IPR006821 Pfam:PF04732 PRINTS:PR01248 GO:GO:0005198
GO:GO:0043025 GO:GO:0005882 HOGENOM:HOG000230977 HOVERGEN:HBG013015
GO:GO:0005883 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 Orphanet:803
GO:GO:0045104 GO:GO:0042622 GO:GO:0045098 CTD:5630 eggNOG:NOG282699
KO:K07607 OrthoDB:EOG4JWVDP GO:GO:0044299 EMBL:L14565 EMBL:AC125611
EMBL:BC032703 IPI:IPI00013164 IPI:IPI00793184 PIR:A55185
RefSeq:NP_006253.2 UniGene:Hs.37044 ProteinModelPortal:P41219
SMR:P41219 IntAct:P41219 MINT:MINT-1482695 STRING:P41219
PhosphoSite:P41219 DMDM:118585871 PaxDb:P41219 PRIDE:P41219
DNASU:5630 Ensembl:ENST00000257860 GeneID:5630 KEGG:hsa:5630
UCSC:uc001rtu.3 GeneCards:GC12P049687 H-InvDB:HIX0026468
HGNC:HGNC:9461 HPA:CAB002437 MIM:170710 neXtProt:NX_P41219
PharmGKB:PA33816 InParanoid:P41219 OMA:VVETFLY PhylomeDB:P41219
GenomeRNAi:5630 NextBio:21882 ArrayExpress:P41219 Bgee:P41219
CleanEx:HS_PRPH Genevestigator:P41219 GermOnline:ENSG00000135406
Uniprot:P41219
Length = 470
Score = 169 (64.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 37/88 (42%), Positives = 58/88 (65%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ LR N L + +ELE+Q E Q+ AR+E E+++L+ EM L++Y+EL+
Sbjct: 325 EVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKEEMARHLREYQELLN 384
Query: 263 IKINLDVEIAQYRNLMEAEES--SLPTY 288
+K+ LD+EIA YR L+E EES S+P +
Sbjct: 385 VKMALDIEIATYRKLLEGEESRISVPVH 412
Score = 36 (17.7 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 90 LYNKGSEEQSLGNWQLVRKVQG---EVKTSFKFH 120
L+ K ++ +L +L RK++ E++ K H
Sbjct: 199 LFRKDVDDATLSRLELERKIESLMDEIEFLKKLH 232
>UNIPROTKB|Q5XFN2 [details] [associations]
symbol:DES "Desmin" species:9615 "Canis lupus familiaris"
[GO:0042383 "sarcolemma" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA]
[GO:0008092 "cytoskeletal protein binding" evidence=IEA]
[GO:0005916 "fascia adherens" evidence=IEA] [GO:0005882
"intermediate filament" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] InterPro:IPR001664
InterPro:IPR006821 Pfam:PF04732 GO:GO:0030018 GO:GO:0005198
GO:GO:0031594 GO:GO:0005882 GO:GO:0042383 GO:GO:0005916
HOGENOM:HOG000230977 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
CTD:1674 eggNOG:NOG147125 GeneTree:ENSGT00660000095344 KO:K07610
OMA:SSEMHSK EMBL:BK005142 RefSeq:NP_001012394.1 UniGene:Cfa.39656
ProteinModelPortal:Q5XFN2 SMR:Q5XFN2 STRING:Q5XFN2
Ensembl:ENSCAFT00000024554 GeneID:497091 KEGG:cfa:497091
InParanoid:Q5XFN2 OrthoDB:EOG4H9XKM NextBio:20865851 Uniprot:Q5XFN2
Length = 469
Score = 170 (64.9 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 39/93 (41%), Positives = 58/93 (62%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + +E+ED+ E Q AR+E EI+ L+ EM L++Y++
Sbjct: 330 YTCEIDALKGTNDSLMRQMREMEDRFASEASGYQDNIARLEEEIRHLKDEMARHLREYQD 389
Query: 260 LMEIKINLDVEIAQYRNLMEAEES--SLP--TY 288
L+ +K+ LDVEIA YR L+E EES +LP TY
Sbjct: 390 LLNVKMALDVEIATYRKLLEGEESRINLPIQTY 422
>ZFIN|ZDB-GENE-980526-221 [details] [associations]
symbol:desma "desmin a" species:7955 "Danio rerio"
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0045214 "sarcomere
organization" evidence=IMP] [GO:0060047 "heart contraction"
evidence=IMP] InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732
ZFIN:ZDB-GENE-980526-221 GO:GO:0005198 GO:GO:0005882 GO:GO:0060047
GO:GO:0045214 HOGENOM:HOG000230977 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 eggNOG:NOG147125 OrthoDB:EOG4H9XKM
EMBL:BC092715 EMBL:BC165607 IPI:IPI00489577 UniGene:Dr.75084
SMR:Q568U6 STRING:Q568U6 InParanoid:Q568U6 Uniprot:Q568U6
Length = 488
Score = 170 (64.9 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 37/89 (41%), Positives = 57/89 (64%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + E+E+++ E Q AR+EAEI +++ EM L++Y++
Sbjct: 325 YTCEIDSLKGTNESLRRQMSEMEERLGREAGGYQDTIARLEAEIAKMKDEMARHLREYQD 384
Query: 260 LMEIKINLDVEIAQYRNLMEAEES--SLP 286
L+ +K+ LDVEIA YR L+E EES SLP
Sbjct: 385 LLNVKMALDVEIATYRKLLEGEESRISLP 413
>RGD|3414 [details] [associations]
symbol:Prph "peripherin" species:10116 "Rattus norvegicus"
[GO:0005198 "structural molecule activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005882 "intermediate filament"
evidence=ISO] [GO:0005883 "neurofilament" evidence=ISO] [GO:0030424
"axon" evidence=ISO] [GO:0042622 "photoreceptor outer segment
membrane" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0044299 "C-fiber" evidence=ISO] [GO:0045098 "type
III intermediate filament" evidence=IDA] [GO:0045104 "intermediate
filament cytoskeleton organization" evidence=ISO;IMP]
InterPro:IPR001664 InterPro:IPR002957 InterPro:IPR006821 Pfam:PF04732
PRINTS:PR01248 RGD:3414 GO:GO:0005198 GO:GO:0043025
HOGENOM:HOG000230977 HOVERGEN:HBG013015 GO:GO:0005883
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038
PROSITE:PS00226 GO:GO:0045104 GO:GO:0042622 GO:GO:0045098
eggNOG:NOG282699 OrthoDB:EOG4JWVDP GO:GO:0044299 EMBL:M26232
EMBL:AF031878 IPI:IPI00326582 PIR:JN0016 UniGene:Rn.11086
ProteinModelPortal:P21807 SMR:P21807 IntAct:P21807 MINT:MINT-7138936
STRING:P21807 PhosphoSite:P21807 PRIDE:P21807 UCSC:RGD:3414
ArrayExpress:P21807 Genevestigator:P21807
GermOnline:ENSRNOG00000015643 Uniprot:P21807
Length = 468
Score = 169 (64.5 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 37/88 (42%), Positives = 58/88 (65%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ LR N L + +ELE+Q E Q+ AR+E E+++L+ EM L++Y+EL+
Sbjct: 322 EVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKEEMARHLREYQELLN 381
Query: 263 IKINLDVEIAQYRNLMEAEES--SLPTY 288
+K+ LD+EIA YR L+E EES S+P +
Sbjct: 382 VKMALDIEIATYRKLLEGEESRISVPVH 409
>UNIPROTKB|F1M7P4 [details] [associations]
symbol:Prph "Peripherin" species:10116 "Rattus norvegicus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005883 "neurofilament" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044299
"C-fiber" evidence=IEA] [GO:0045104 "intermediate filament
cytoskeleton organization" evidence=IEA] InterPro:IPR001664
InterPro:IPR002957 InterPro:IPR006821 Pfam:PF04732 PRINTS:PR01248
RGD:3414 GO:GO:0005198 GO:GO:0005883 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045104 GO:GO:0042622 GeneTree:ENSGT00660000095344 CTD:5630
KO:K07607 GO:GO:0044299 IPI:IPI00326582 UniGene:Rn.11086
RefSeq:NP_036765.2 PRIDE:F1M7P4 Ensembl:ENSRNOT00000021010
GeneID:24688 KEGG:rno:24688 NextBio:604123 ArrayExpress:F1M7P4
Uniprot:F1M7P4
Length = 473
Score = 169 (64.5 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 37/88 (42%), Positives = 58/88 (65%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ LR N L + +ELE+Q E Q+ AR+E E+++L+ EM L++Y+EL+
Sbjct: 328 EVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKEEMARHLREYQELLN 387
Query: 263 IKINLDVEIAQYRNLMEAEES--SLPTY 288
+K+ LD+EIA YR L+E EES S+P +
Sbjct: 388 VKMALDIEIATYRKLLEGEESRISVPVH 415
>MGI|MGI:97774 [details] [associations]
symbol:Prph "peripherin" species:10090 "Mus musculus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005882
"intermediate filament" evidence=IDA] [GO:0005883 "neurofilament"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISO] [GO:0044299 "C-fiber"
evidence=IDA] [GO:0045098 "type III intermediate filament"
evidence=ISO] [GO:0045104 "intermediate filament cytoskeleton
organization" evidence=ISO;IDA] InterPro:IPR001664
InterPro:IPR002957 InterPro:IPR006821 Pfam:PF04732 PRINTS:PR01248
MGI:MGI:97774 GO:GO:0005198 GO:GO:0043025 HOGENOM:HOG000230977
HOVERGEN:HBG013015 GO:GO:0005883 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045104 GO:GO:0042622 eggNOG:NOG282699 OrthoDB:EOG4JWVDP
GO:GO:0044299 EMBL:X15475 EMBL:BC046291 EMBL:X59840 IPI:IPI00129527
IPI:IPI00230444 IPI:IPI00230445 PIR:S14887 UniGene:Mm.2477
ProteinModelPortal:P15331 SMR:P15331 IntAct:P15331 STRING:P15331
PhosphoSite:P15331 UCD-2DPAGE:P15331 PaxDb:P15331 PRIDE:P15331
UCSC:uc007xon.2 UCSC:uc007xoo.2 CleanEx:MM_PRPH
Genevestigator:P15331 GermOnline:ENSMUSG00000023484 Uniprot:P15331
Length = 475
Score = 169 (64.5 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 37/88 (42%), Positives = 58/88 (65%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ LR N L + +ELE+Q E Q+ AR+E E+++L+ EM L++Y+EL+
Sbjct: 329 EVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKEEMARHLREYQELLN 388
Query: 263 IKINLDVEIAQYRNLMEAEES--SLPTY 288
+K+ LD+EIA YR L+E EES S+P +
Sbjct: 389 VKMALDIEIATYRKLLEGEESRISVPVH 416
>UNIPROTKB|F1SHC0 [details] [associations]
symbol:PRPH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045104 "intermediate filament cytoskeleton
organization" evidence=IEA] [GO:0044299 "C-fiber" evidence=IEA]
[GO:0042622 "photoreceptor outer segment membrane" evidence=IEA]
[GO:0005883 "neurofilament" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] InterPro:IPR001664
InterPro:IPR002957 PRINTS:PR01248 GO:GO:0005198 GO:GO:0005883
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045104 GO:GO:0042622
GeneTree:ENSGT00660000095344 GO:GO:0044299 OMA:VVETFLY
EMBL:CU633660 Ensembl:ENSSSCT00000000208 Uniprot:F1SHC0
Length = 389
Score = 166 (63.5 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 36/88 (40%), Positives = 58/88 (65%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ LR N L + +ELE+Q E Q+ A++E E+++L+ EM L++Y+EL+
Sbjct: 244 EVDGLRGTNEALLRQLRELEEQFALEAGGYQAGAAKLEEELRQLKEEMARHLREYQELLN 303
Query: 263 IKINLDVEIAQYRNLMEAEES--SLPTY 288
+K+ LD+EIA YR L+E EES S+P +
Sbjct: 304 VKMALDIEIATYRKLLEGEESRISVPVH 331
>RGD|1560077 [details] [associations]
symbol:Ifltd1 "intermediate filament tail domain containing 1"
species:10116 "Rattus norvegicus" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005635 "nuclear envelope" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0008283 "cell proliferation"
evidence=ISO] InterPro:IPR001664 RGD:1560077 GO:GO:0005737
GO:GO:0005635 GO:GO:0005198 GO:GO:0008283 PANTHER:PTHR23239
InterPro:IPR001322 Pfam:PF00932 OrthoDB:EOG4WDDCD
GeneTree:ENSGT00450000040420 IPI:IPI00207226
Ensembl:ENSRNOT00000021306 UCSC:RGD:1560077 Uniprot:D4ABG2
Length = 410
Score = 166 (63.5 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 35/107 (32%), Positives = 61/107 (57%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQ-SLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q SS+ G+++I EV+ G FV+L N +E++ +GN+ L + V G+ + ++F + +
Sbjct: 169 QFVSSSLGDIKIAEVNVKGFFVRLVNSSNEKEVEIGNYILQQNVNGQAVSLYRFPHNITM 228
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGE 172
+A GTVTVW+ E +P + + +F S + +TIL GE
Sbjct: 229 QASGTVTVWAAASEAKPQQPTDFVWEEQSRFRSSPDCTTILCKPSGE 275
>MGI|MGI:1921321 [details] [associations]
symbol:Ifltd1 "intermediate filament tail domain containing
1" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IDA] InterPro:IPR001664
MGI:MGI:1921321 GO:GO:0005737 GO:GO:0005635 GO:GO:0005198
GO:GO:0008283 GO:GO:0005882 PANTHER:PTHR23239 InterPro:IPR001322
Pfam:PF00932 HSSP:P02545 CTD:160492 eggNOG:NOG278780
HOGENOM:HOG000113053 HOVERGEN:HBG071391 OMA:FLPNIVM
OrthoDB:EOG4WDDCD EMBL:AY753326 EMBL:AK016641 EMBL:BC053420
IPI:IPI00137076 RefSeq:NP_083018.1 UniGene:Mm.441497
ProteinModelPortal:Q9D4C1 SMR:Q9D4C1 STRING:Q9D4C1
PhosphoSite:Q9D4C1 PRIDE:Q9D4C1 Ensembl:ENSMUST00000111708
GeneID:74071 KEGG:mmu:74071 UCSC:uc009ero.1
GeneTree:ENSGT00450000040420 InParanoid:Q9D4C1 NextBio:339691
Bgee:Q9D4C1 CleanEx:MM_IFLTD1 Genevestigator:Q9D4C1 Uniprot:Q9D4C1
Length = 413
Score = 166 (63.5 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 40/108 (37%), Positives = 63/108 (58%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQ-SLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q TSS+ G ++I EV+ G FV+L N +E++ +GN L + V G + ++F + +
Sbjct: 172 QFTSSSLGEIKIAEVNIKGLFVRLVNSSNEKEVEIGNHILQQNVNGHAVSLYQFPDNITL 231
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A +PP + V + Q KF S + +TIL +GE
Sbjct: 232 QANSTVTVWAAASE-AKPQPPTDFVWEEQSKFRSSPDCTTILCKPNGE 278
>WB|WBGene00002053 [details] [associations]
symbol:ifb-1 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR001664
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0005737
GO:GO:0040007 GO:GO:0002119 GO:GO:0005198 GO:GO:0018996
GO:GO:0010171 GO:GO:0040011 GO:GO:0005882 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0040002 InterPro:IPR001322 Pfam:PF00932
GeneTree:ENSGT00560000076873 HOGENOM:HOG000017007
InterPro:IPR016451 PANTHER:PTHR23239:SF13 PIRSF:PIRSF005546
EMBL:X70830 EMBL:FO080600 PIR:D88163 PIR:T16018 RefSeq:NP_495136.1
RefSeq:NP_495137.1 ProteinModelPortal:Q19289 SMR:Q19289
DIP:DIP-26309N IntAct:Q19289 MINT:MINT-1053724 STRING:Q19289
World-2DPAGE:0020:Q19289 PaxDb:Q19289 PRIDE:Q19289
EnsemblMetazoa:F10C1.2b GeneID:173976 KEGG:cel:CELE_F10C1.2
UCSC:F10C1.2b CTD:173976 WormBase:F10C1.2a WormBase:F10C1.2b
eggNOG:NOG315022 InParanoid:Q19289 OMA:RRMREEC NextBio:881937
Uniprot:Q19289
Length = 589
Score = 168 (64.2 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 38/116 (32%), Positives = 69/116 (59%)
Query: 59 EERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSF 117
E T + FQ SAKGN+ I+E DP+GKF+KL N ++++++G ++ RK+ G + +
Sbjct: 463 EVSTKTTFQ--RSAKGNVTISECDPNGKFIKLENSHRNKDENVGEHKIRRKLDGRREIVY 520
Query: 118 KFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
+ I+ G +T+++ + +G + PP ++V + +G G + T L+N DGE
Sbjct: 521 SIPANVVIKPGKNLTIYARD-QGGINNPPESLVFDGENTWGIGANVVTSLVNKDGE 575
>UNIPROTKB|Q19289 [details] [associations]
symbol:ifb-1 "Intermediate filament protein ifb-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001664 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0005198 GO:GO:0018996 GO:GO:0010171 GO:GO:0040011
GO:GO:0005882 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0040002
InterPro:IPR001322 Pfam:PF00932 GeneTree:ENSGT00560000076873
HOGENOM:HOG000017007 InterPro:IPR016451 PANTHER:PTHR23239:SF13
PIRSF:PIRSF005546 EMBL:X70830 EMBL:FO080600 PIR:D88163 PIR:T16018
RefSeq:NP_495136.1 RefSeq:NP_495137.1 ProteinModelPortal:Q19289
SMR:Q19289 DIP:DIP-26309N IntAct:Q19289 MINT:MINT-1053724
STRING:Q19289 World-2DPAGE:0020:Q19289 PaxDb:Q19289 PRIDE:Q19289
EnsemblMetazoa:F10C1.2b GeneID:173976 KEGG:cel:CELE_F10C1.2
UCSC:F10C1.2b CTD:173976 WormBase:F10C1.2a WormBase:F10C1.2b
eggNOG:NOG315022 InParanoid:Q19289 OMA:RRMREEC NextBio:881937
Uniprot:Q19289
Length = 589
Score = 168 (64.2 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 38/116 (32%), Positives = 69/116 (59%)
Query: 59 EERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSF 117
E T + FQ SAKGN+ I+E DP+GKF+KL N ++++++G ++ RK+ G + +
Sbjct: 463 EVSTKTTFQ--RSAKGNVTISECDPNGKFIKLENSHRNKDENVGEHKIRRKLDGRREIVY 520
Query: 118 KFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQK-FGSGDEISTILLNTDGE 172
+ I+ G +T+++ + +G + PP ++V + +G G + T L+N DGE
Sbjct: 521 SIPANVVIKPGKNLTIYARD-QGGINNPPESLVFDGENTWGIGANVVTSLVNKDGE 575
>WB|WBGene00002051 [details] [associations]
symbol:ifa-3 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0018991 "oviposition" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0030163 "protein
catabolic process" evidence=IMP] InterPro:IPR001664 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0005198 GO:GO:0010171 GO:GO:0040011 GO:GO:0005882
GO:GO:0030163 InterPro:IPR016044 PANTHER:PTHR23239 Pfam:PF00038
PROSITE:PS00226 InterPro:IPR001322 Pfam:PF00932 eggNOG:NOG325506
GeneTree:ENSGT00560000076873 HOGENOM:HOG000017007
InterPro:IPR016451 PANTHER:PTHR23239:SF13 PIRSF:PIRSF005546
EMBL:Z81140 EMBL:X70831 EMBL:Z54282 PIR:S46327 PIR:T22507
RefSeq:NP_510649.3 ProteinModelPortal:Q21065 SMR:Q21065
IntAct:Q21065 STRING:Q21065 PaxDb:Q21065 EnsemblMetazoa:F52E10.5
GeneID:181699 KEGG:cel:CELE_F52E10.5 UCSC:F52E10.5 CTD:181699
WormBase:F52E10.5 InParanoid:Q21065 NextBio:914996 Uniprot:Q21065
Length = 581
Score = 167 (63.8 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 45/118 (38%), Positives = 65/118 (55%)
Query: 57 ESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKGSE-EQSLGNWQLVRKVQGEVKT 115
E RTS +Q SAKGN+ I EV P+GKFV L N + E+ LG+W+L RK+ G+ +
Sbjct: 454 EHSSRTS--YQ--RSAKGNVSIKEVSPEGKFVILENTHRDKEEPLGDWKLKRKIDGKREI 509
Query: 116 SFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMK-NQKFGSGDEISTILLNTDGE 172
F F + TV +++ G + PP +V + + FG+G + TIL N GE
Sbjct: 510 VFTFPSDYILHPVQTVKIFARG-NGVAN-PPEVLVFEGDDTFGAGANVQTILYNNSGE 565
>UNIPROTKB|J9NUP2 [details] [associations]
symbol:IFLTD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 GO:GO:0005198 PANTHER:PTHR23239
InterPro:IPR001322 Pfam:PF00932 GeneTree:ENSGT00450000040420
EMBL:AAEX03015188 Ensembl:ENSCAFT00000049686 Uniprot:J9NUP2
Length = 335
Score = 162 (62.1 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 40/108 (37%), Positives = 62/108 (57%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q SSA G+++I EV+ G FVKL N +E +G L + V G+ + ++F + +
Sbjct: 94 QSRSSALGDIKIAEVNVKGLFVKLINSSLDKELEIGGHILQQNVNGQTISLYRFLPNIVM 153
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + + Q KF +G +TIL +GE
Sbjct: 154 QANCTVTVWAAASE-AKHQPPSDFLWREQNKFKTGPNCTTILCKPNGE 200
>ZFIN|ZDB-GENE-061027-102 [details] [associations]
symbol:desmb "desmin b" species:7955 "Danio rerio"
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001664
InterPro:IPR006821 Pfam:PF04732 ZFIN:ZDB-GENE-061027-102
GO:GO:0005198 GO:GO:0005882 HOGENOM:HOG000230977 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 eggNOG:NOG147125 KO:K07610
OrthoDB:EOG4H9XKM EMBL:BC124512 IPI:IPI00864538
RefSeq:NP_001070920.1 UniGene:Dr.78362 ProteinModelPortal:Q05AI8
SMR:Q05AI8 PRIDE:Q05AI8 GeneID:768287 KEGG:dre:768287 CTD:768287
NextBio:20918551 ArrayExpress:Q05AI8 Bgee:Q05AI8 Uniprot:Q05AI8
Length = 474
Score = 164 (62.8 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 34/86 (39%), Positives = 55/86 (63%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ +N L + +++ED+ E Q AR+EAEI ++ EM L++Y++
Sbjct: 333 YTCEIDSLKGSNESLMRQMRDMEDRHGREAGALQDTIARLEAEIANMKDEMARHLREYQD 392
Query: 260 LMEIKINLDVEIAQYRNLMEAEESSL 285
L+ +K+ LDVEIA YR L+E EES +
Sbjct: 393 LLNVKMALDVEIATYRKLLEGEESRI 418
>UNIPROTKB|E2QX11 [details] [associations]
symbol:IFLTD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005635 "nuclear
envelope" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 GO:GO:0005737 GO:GO:0005635
GO:GO:0005198 GO:GO:0008283 PANTHER:PTHR23239 InterPro:IPR001322
Pfam:PF00932 OMA:FLPNIVM GeneTree:ENSGT00450000040420
EMBL:AAEX03015188 Ensembl:ENSCAFT00000018133 Uniprot:E2QX11
Length = 409
Score = 162 (62.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 40/108 (37%), Positives = 62/108 (57%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q SSA G+++I EV+ G FVKL N +E +G L + V G+ + ++F + +
Sbjct: 155 QSRSSALGDIKIAEVNVKGLFVKLINSSLDKELEIGGHILQQNVNGQTISLYRFLPNIVM 214
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E A H+PP + + + Q KF +G +TIL +GE
Sbjct: 215 QANCTVTVWAAASE-AKHQPPSDFLWREQNKFKTGPNCTTILCKPNGE 261
>UNIPROTKB|P02542 [details] [associations]
symbol:DES "Desmin" species:9031 "Gallus gallus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001664 InterPro:IPR006821
Pfam:PF04732 GO:GO:0005737 GO:GO:0005198 GO:GO:0005882
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 eggNOG:NOG147125
EMBL:K02445 IPI:IPI00591946 PIR:A90969 ProteinModelPortal:P02542
SMR:P02542 STRING:P02542 PRIDE:P02542 Uniprot:P02542
Length = 463
Score = 162 (62.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 35/91 (38%), Positives = 57/91 (62%)
Query: 204 YDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRE 259
Y E++ L+ N L + +E+E++ E Q AR+E EI+ L+ EM L++Y++
Sbjct: 322 YTCEIDALKGTNDSLMRQMREMEERFAGEAGGYQDTIARLEEEIRHLKDEMARHLREYQD 381
Query: 260 LMEIKINLDVEIAQYRNLMEAEES--SLPTY 288
L+ +K+ LDVEIA YR L+E EE+ S+P +
Sbjct: 382 LLNVKMALDVEIATYRKLLEGEENRISIPMH 412
>WB|WBGene00017327 [details] [associations]
symbol:F10C1.8 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] GO:GO:0009792 GO:GO:0040007 GO:GO:0040018
InterPro:IPR001322 Pfam:PF00932 EMBL:FO080600 RefSeq:NP_495132.2
ProteinModelPortal:H2KYU8 SMR:H2KYU8 PRIDE:H2KYU8
EnsemblMetazoa:F10C1.8a GeneID:266725 KEGG:cel:CELE_F10C1.8
CTD:266725 WormBase:F10C1.8a OMA:MESHASW Uniprot:H2KYU8
Length = 160
Score = 141 (54.7 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 38/121 (31%), Positives = 64/121 (52%)
Query: 54 EEYESEE-RTSSGFQVTSSAKGNMEITEVDPDGKFVKLYN-KGSEEQSLGNWQLVRKVQG 111
+ ++S E +T S F+ AKGN+ I E DP GK++ L N GS + + N+++ R + G
Sbjct: 22 DHWDSGEVQTRSSFK--RHAKGNVSIVECDPQGKYIILENTSGSVAEDVSNFEIRRVIDG 79
Query: 112 EVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTD 170
F+ L I+ G + ++ N G + P +IVM++ +G G + T L N+
Sbjct: 80 VQAFVFRLPSHLVIQQHGHLKIYGRNA-GEINLTPDSIVMESHASWGQGRQAETFLYNSH 138
Query: 171 G 171
G
Sbjct: 139 G 139
>UNIPROTKB|F1PRC4 [details] [associations]
symbol:LOC608165 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0045095 "keratin filament"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR003054 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095 PANTHER:PTHR23239:SF18
EMBL:AAEX03015008 Ensembl:ENSCAFT00000011710
GeneTree:ENSGT00670000098177 OMA:CEEVQAT Uniprot:F1PRC4
Length = 163
Score = 138 (53.6 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 32/70 (45%), Positives = 45/70 (64%)
Query: 217 RLTERNKELEDQI-EYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYR 275
R TE ED + Q K A +EA ++R + +M QL++Y++LM IK+ LD EIA YR
Sbjct: 49 RATEPPALREDGASDSAQGKLAWLEAALQRAKHDMVRQLREYQDLMIIKLGLDFEIATYR 108
Query: 276 NLMEAEESSL 285
L+E+EES L
Sbjct: 109 KLLESEESRL 118
>ZFIN|ZDB-GENE-990415-207 [details] [associations]
symbol:prph "peripherin" species:7955 "Danio rerio"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0042246
"tissue regeneration" evidence=IEP] InterPro:IPR001664
InterPro:IPR002957 InterPro:IPR006821 Pfam:PF04732 PRINTS:PR01248
ZFIN:ZDB-GENE-990415-207 GO:GO:0005198 GO:GO:0005882 GO:GO:0042246
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 EMBL:BC095599
IPI:IPI00497317 UniGene:Dr.263 ProteinModelPortal:Q502Q7 SMR:Q502Q7
InParanoid:Q502Q7 ArrayExpress:Q502Q7 Uniprot:Q502Q7
Length = 442
Score = 157 (60.3 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 31/83 (37%), Positives = 53/83 (63%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
++ L++ N L + +E+E+Q E Q R+E EI+ L+ EM+ L++Y++L+
Sbjct: 304 DIEALKSTNEALLRQMREMEEQFTLEAGNYQDAVGRLEEEIRHLKEEMSRHLREYQDLLN 363
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 364 VKMALDIEIATYRKLLEGEESRI 386
Score = 37 (18.1 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 75 NMEITEVDPDGKFVKLYNKGSEEQSLGNWQLVRKVQG---EVKTSFKFH 120
N E+ + + + L+ K ++ +L +L RK++ E++ K H
Sbjct: 163 NEEMQKREEAENNLTLFRKDVDDATLARLELERKIESLMDEIEFLKKMH 211
>WB|WBGene00002054 [details] [associations]
symbol:ifb-2 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0040007 "growth" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0045179 "apical cortex" evidence=IDA]
InterPro:IPR001664 GO:GO:0009792 GO:GO:0040007 GO:GO:0005198
GO:GO:0040018 GO:GO:0005882 GO:GO:0045179 InterPro:IPR016044
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322
Pfam:PF00932 GeneTree:ENSGT00560000076873 HOGENOM:HOG000017007
InterPro:IPR016451 PANTHER:PTHR23239:SF13 PIRSF:PIRSF005546
EMBL:FO080600 EMBL:X78553 EMBL:X78554 PIR:T16015 RefSeq:NP_495133.1
RefSeq:NP_495134.1 ProteinModelPortal:Q19286 SMR:Q19286
DIP:DIP-26763N IntAct:Q19286 MINT:MINT-115582 STRING:Q19286
World-2DPAGE:0011:Q19286 World-2DPAGE:0020:Q19286 PaxDb:Q19286
PRIDE:Q19286 EnsemblMetazoa:F10C1.7a.1 EnsemblMetazoa:F10C1.7a.2
GeneID:173973 KEGG:cel:CELE_F10C1.7 UCSC:F10C1.7c.1 CTD:173973
WormBase:F10C1.7a WormBase:F10C1.7c eggNOG:NOG235739
InParanoid:Q19286 OMA:VECDPTG NextBio:881927 Uniprot:Q19286
Length = 543
Score = 159 (61.0 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 43/135 (31%), Positives = 73/135 (54%)
Query: 42 VAPSKKRKLNILEE--YESEE-RTSSGFQVTSSAKGNMEITEVDPDGKFVKLYN-KGSEE 97
VA + +L +E+ ++S E +T S F+ AKGN+ I E DP GK++ L N GS
Sbjct: 397 VAQQETTRLVPVEQDHWDSGEVQTRSSFK--RHAKGNVSIVECDPQGKYIILENTSGSVA 454
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KF 156
+ + N+++ R + G F+ L I+ G + ++ N G + PP +IVM++ +
Sbjct: 455 EDVSNFEIRRVIDGVQAFVFRLPSHLVIQQHGHLKIYGRN-SGGINSPPDSIVMESHPSW 513
Query: 157 GSGDEISTILLNTDG 171
G G ++ T L N+ G
Sbjct: 514 GQGGQVETFLYNSHG 528
>UNIPROTKB|Q19286 [details] [associations]
symbol:ifb-2 "Intermediate filament protein ifb-2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001664 GO:GO:0009792 GO:GO:0040007
GO:GO:0005198 GO:GO:0040018 GO:GO:0005882 GO:GO:0045179
InterPro:IPR016044 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
InterPro:IPR001322 Pfam:PF00932 GeneTree:ENSGT00560000076873
HOGENOM:HOG000017007 InterPro:IPR016451 PANTHER:PTHR23239:SF13
PIRSF:PIRSF005546 EMBL:FO080600 EMBL:X78553 EMBL:X78554 PIR:T16015
RefSeq:NP_495133.1 RefSeq:NP_495134.1 ProteinModelPortal:Q19286
SMR:Q19286 DIP:DIP-26763N IntAct:Q19286 MINT:MINT-115582
STRING:Q19286 World-2DPAGE:0011:Q19286 World-2DPAGE:0020:Q19286
PaxDb:Q19286 PRIDE:Q19286 EnsemblMetazoa:F10C1.7a.1
EnsemblMetazoa:F10C1.7a.2 GeneID:173973 KEGG:cel:CELE_F10C1.7
UCSC:F10C1.7c.1 CTD:173973 WormBase:F10C1.7a WormBase:F10C1.7c
eggNOG:NOG235739 InParanoid:Q19286 OMA:VECDPTG NextBio:881927
Uniprot:Q19286
Length = 543
Score = 159 (61.0 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 43/135 (31%), Positives = 73/135 (54%)
Query: 42 VAPSKKRKLNILEE--YESEE-RTSSGFQVTSSAKGNMEITEVDPDGKFVKLYN-KGSEE 97
VA + +L +E+ ++S E +T S F+ AKGN+ I E DP GK++ L N GS
Sbjct: 397 VAQQETTRLVPVEQDHWDSGEVQTRSSFK--RHAKGNVSIVECDPQGKYIILENTSGSVA 454
Query: 98 QSLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KF 156
+ + N+++ R + G F+ L I+ G + ++ N G + PP +IVM++ +
Sbjct: 455 EDVSNFEIRRVIDGVQAFVFRLPSHLVIQQHGHLKIYGRN-SGGINSPPDSIVMESHPSW 513
Query: 157 GSGDEISTILLNTDG 171
G G ++ T L N+ G
Sbjct: 514 GQGGQVETFLYNSHG 528
>ZFIN|ZDB-GENE-990914-3 [details] [associations]
symbol:gfap "glial fibrillary acidic protein"
species:7955 "Danio rerio" [GO:0005882 "intermediate filament"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0045098 "type III intermediate
filament" evidence=IDA] InterPro:IPR001664 InterPro:IPR006821
Pfam:PF04732 ZFIN:ZDB-GENE-990914-3 GO:GO:0005737 GO:GO:0005198
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0045098
CTD:2670 eggNOG:NOG259463 KO:K05640 OrthoDB:EOG48WC24 EMBL:AY151283
EMBL:AY151284 EMBL:AY151290 EMBL:AY151288 EMBL:AY151289
EMBL:AY397679 EMBL:BC068410 EMBL:BC091942 EMBL:BC128803
EMBL:AF174393 IPI:IPI00613480 RefSeq:NP_571448.2 UniGene:Dr.32667
HSSP:P08670 ProteinModelPortal:Q58EE9 SMR:Q58EE9 STRING:Q58EE9
PRIDE:Q58EE9 GeneID:30646 KEGG:dre:30646 InParanoid:Q58EE9
NextBio:20807003 ArrayExpress:Q58EE9 Uniprot:Q58EE9
Length = 444
Score = 157 (60.3 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 32/83 (38%), Positives = 53/83 (63%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
++ LR +N L + +E+E++ E Q AR+E EI+ L+ EM L++Y++L+
Sbjct: 307 DLESLRGSNESLERQLREMEERFAIETAGYQDTVARLEDEIQMLKEEMARHLQEYQDLLN 366
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 367 VKLALDIEIATYRKLLEGEESRI 389
>UNIPROTKB|F1MRA0 [details] [associations]
symbol:IFLTD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 GO:GO:0005737 GO:GO:0005635
GO:GO:0005198 GO:GO:0008283 PANTHER:PTHR23239 InterPro:IPR001322
Pfam:PF00932 OMA:FLPNIVM GeneTree:ENSGT00450000040420
EMBL:DAAA02014042 IPI:IPI00717359 Ensembl:ENSBTAT00000000995
Uniprot:F1MRA0
Length = 399
Score = 156 (60.0 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 38/108 (35%), Positives = 62/108 (57%)
Query: 67 QVTSSAKGNMEITEVDPDGKFVKLYNKGSEEQ-SLGNWQLVRKVQGEVKTSFKFHRTLKI 125
Q SSA G+++I EV+ G FVKL N +++ +GN L + V G+ + ++F + +
Sbjct: 145 QSRSSAVGDIKIAEVNVKGLFVKLINSSPDKELEIGNHTLQQNVGGQTISLYRFLPGIIM 204
Query: 126 EAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFGSGDEISTILLNTDGE 172
+A TVTVW+ E H+ P + + K Q +F +G +TIL +GE
Sbjct: 205 QANSTVTVWTAASE-VKHQSPSDFLWKEQNRFQTGPNCTTILCKPNGE 251
>WB|WBGene00003485 [details] [associations]
symbol:mua-6 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] InterPro:IPR001664 GO:GO:0006898
GO:GO:0040010 GO:GO:0002119 GO:GO:0005198 GO:GO:0018996
GO:GO:0010171 GO:GO:0040011 GO:GO:0005882 InterPro:IPR016044
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0030056
InterPro:IPR001322 Pfam:PF00932 eggNOG:NOG325506
GeneTree:ENSGT00560000076873 HOGENOM:HOG000017007
InterPro:IPR016451 PANTHER:PTHR23239:SF13 PIRSF:PIRSF005546
EMBL:X70835 EMBL:Z81140 PIR:T26335 RefSeq:NP_510648.1
ProteinModelPortal:O02365 SMR:O02365 DIP:DIP-26450N IntAct:O02365
MINT:MINT-117122 STRING:O02365 PaxDb:O02365
EnsemblMetazoa:W10G6.3.1 EnsemblMetazoa:W10G6.3.2 GeneID:181698
KEGG:cel:CELE_W10G6.3 UCSC:W10G6.3.1 CTD:181698 WormBase:W10G6.3
InParanoid:O02365 OMA:HIQRQSQ NextBio:914992 Uniprot:O02365
Length = 581
Score = 157 (60.3 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 42/118 (35%), Positives = 66/118 (55%)
Query: 57 ESEERTSSGFQVTSSAKGNMEITEVDPDGKFVKLYNKG-SEEQSLGNWQLVRKVQGEVKT 115
E RTS +Q SAKGN+ I E P+GKFV L N ++E+ LG+W+L RK+ G+ +
Sbjct: 454 EHSSRTS--YQ--RSAKGNVAIKETSPEGKFVILENTHRAKEEPLGDWKLKRKIDGKREI 509
Query: 116 SFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMK-NQKFGSGDEISTILLNTDGE 172
F F + +V +++ +G + PP ++ + ++ FG G + TIL N GE
Sbjct: 510 VFTFPSDYILHPFQSVKIFARG-QGIAN-PPEVLIFEGDETFGVGANVQTILYNNKGE 565
>UNIPROTKB|B0YJC5 [details] [associations]
symbol:VIM "Vimentin" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 GO:GO:0005198 GO:GO:0005882 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 EMBL:AL133415 EMBL:EF445046
UniGene:Hs.455493 UniGene:Hs.691131 HGNC:HGNC:12692 ChiTaRS:VIM
IPI:IPI00982595 SMR:B0YJC5 STRING:B0YJC5 Ensembl:ENST00000469543
Uniprot:B0YJC5
Length = 228
Score = 147 (56.8 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 29/81 (35%), Positives = 50/81 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ L+ N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 147 EVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLN 206
Query: 263 IKINLDVEIAQYRNLMEAEES 283
+K+ LD+EIA YR L+E EES
Sbjct: 207 VKMALDIEIATYRKLLEGEES 227
>UNIPROTKB|H9KZP2 [details] [associations]
symbol:KRT8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 GO:GO:0005198 GO:GO:0005882 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GeneTree:ENSGT00650000093312 EMBL:AADN02076521
Ensembl:ENSGALT00000016651 OMA:NFGMESS Uniprot:H9KZP2
Length = 131
Score = 134 (52.2 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 23/53 (43%), Positives = 40/53 (75%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++K + +EA +++ + ++ QL++Y+ELM +K+ LD+EIA YR L+E EES L
Sbjct: 7 RAKLSELEAALQKAKQDLARQLREYQELMNVKLALDIEIATYRKLLEGEESRL 59
>UNIPROTKB|Q49MC0 [details] [associations]
symbol:vimentin "Vimentin" species:9031 "Gallus gallus"
[GO:0005200 "structural constituent of cytoskeleton" evidence=IEA]
[GO:0005212 "structural constituent of eye lens" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0010977 "negative regulation
of neuron projection development" evidence=IEA] [GO:0014002
"astrocyte development" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0045109 "intermediate filament organization" evidence=IEA]
[GO:0060020 "Bergmann glial cell differentiation" evidence=IEA]
[GO:0070307 "lens fiber cell development" evidence=IEA] [GO:0097110
"scaffold protein binding" evidence=IEA] InterPro:IPR001664
GO:GO:0005829 GO:GO:0005886 GO:GO:0031252 GO:GO:0005777
GO:GO:0005200 GO:GO:0005882 GO:GO:0042995 GO:GO:0045109
HOGENOM:HOG000230977 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0005212 GeneTree:ENSGT00660000095344 UniGene:Gga.9346
EMBL:AADN02000651 EMBL:AY694792 EMBL:AY694789 EMBL:AY694790
EMBL:AY694791 IPI:IPI00823070 STRING:Q49MC0
Ensembl:ENSGALT00000038304 InParanoid:Q49MC0 Uniprot:Q49MC0
Length = 258
Score = 149 (57.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 29/83 (34%), Positives = 52/83 (62%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ L+ +N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 121 EVDALKGSNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLN 180
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 181 VKMALDIEIATYRKLLEGEESRI 203
>UNIPROTKB|P08776 [details] [associations]
symbol:P08776 "Keratin, type II cytoskeletal 8"
species:8355 "Xenopus laevis" [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005737
GO:GO:0005654 GO:GO:0005198 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0016363 GO:GO:0045095 EMBL:M13811 PIR:A23547 UniGene:Xl.4511
ProteinModelPortal:P08776 SMR:P08776 PRIDE:P08776
Xenbase:XB-GENE-876943 Uniprot:P08776
Length = 502
Score = 155 (59.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 33/87 (37%), Positives = 56/87 (64%)
Query: 203 KYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYR 258
+ +E++ L+A L + E E++ E ++K A +EA +++ + +M+ QL+DY+
Sbjct: 324 RLQSEIDALKAQRANLEAQIAEAEERGELALKDARNKLAELEAALQKAKQDMSRQLRDYQ 383
Query: 259 ELMEIKINLDVEIAQYRNLMEAEESSL 285
ELM +K+ LD+EIA YR L+E EES L
Sbjct: 384 ELMNVKLALDIEIATYRKLLEGEESRL 410
>ZFIN|ZDB-GENE-040426-1743 [details] [associations]
symbol:viml "vimentin like" species:7955 "Danio
rerio" [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001664
InterPro:IPR006821 Pfam:PF04732 ZFIN:ZDB-GENE-040426-1743
GO:GO:0005198 GO:GO:0005882 HOGENOM:HOG000230977 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 eggNOG:NOG146769 OrthoDB:EOG4GHZPD
EMBL:BC059604 IPI:IPI00494279 RefSeq:NP_957067.1 UniGene:Dr.83353
ProteinModelPortal:Q6PBS2 SMR:Q6PBS2 PRIDE:Q6PBS2 GeneID:393746
KEGG:dre:393746 CTD:393746 NextBio:20814747 ArrayExpress:Q6PBS2
Bgee:Q6PBS2 Uniprot:Q6PBS2
Length = 447
Score = 153 (58.9 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 31/83 (37%), Positives = 51/83 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRELME 262
E++ LR N L + +E+E+ E S F R+E +I ++ EM L++Y++L+
Sbjct: 310 ELDALRGTNESLERQMREMEENFGMESSGFQDTIGRLEEDIGNMKDEMARHLREYQDLLN 369
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 370 VKMALDIEIATYRKLLEGEESRI 392
>ZFIN|ZDB-GENE-011212-3 [details] [associations]
symbol:vim "vimentin" species:7955 "Danio rerio"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732
ZFIN:ZDB-GENE-011212-3 GO:GO:0005198 GO:GO:0005882
HOGENOM:HOG000230977 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
HSSP:P08670 eggNOG:NOG146769 CTD:7431 KO:K07606 OrthoDB:EOG4GHZPD
EMBL:AF069994 EMBL:BC053115 IPI:IPI00494222 RefSeq:NP_571947.1
UniGene:Dr.30700 SMR:Q9YHX5 STRING:Q9YHX5 GeneID:140599
KEGG:dre:140599 InParanoid:Q9YHX5 NextBio:20797023 Uniprot:Q9YHX5
Length = 455
Score = 153 (58.9 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 30/83 (36%), Positives = 51/83 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRELME 262
++ L+ N L + +ELED E S + R+E +I+ ++ EM L++Y++L+
Sbjct: 320 DLEALKGTNESLERQMRELEDSFSMEASGYQDTIGRLEDDIRNMKDEMARHLREYQDLLN 379
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 380 VKMALDIEIATYRKLLEGEESRI 402
>UNIPROTKB|P07196 [details] [associations]
symbol:NEFL "Neurofilament light polypeptide" species:9606
"Homo sapiens" [GO:0005200 "structural constituent of cytoskeleton"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030424 "axon" evidence=IDA] [GO:0033693 "neurofilament bundle
assembly" evidence=IMP;IDA] [GO:0045109 "intermediate filament
organization" evidence=IMP] [GO:0005883 "neurofilament"
evidence=IDA] [GO:0019896 "axon transport of mitochondrion"
evidence=IMP] [GO:0008089 "anterograde axon cargo transport"
evidence=IMP] [GO:0008090 "retrograde axon cargo transport"
evidence=IMP] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0033596 "TSC1-TSC2 complex" evidence=IDA] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001664 InterPro:IPR006821
Pfam:PF04732 GO:GO:0005829 EMBL:CH471080 GO:GO:0005200
GO:GO:0007268 GO:GO:0008089 GO:GO:0019896 GO:GO:0008090
HOVERGEN:HBG013015 GO:GO:0005883 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
CTD:4747 eggNOG:NOG145720 KO:K04572 OrthoDB:EOG42Z4QC GO:GO:0033693
EMBL:X05608 EMBL:AY156690 EMBL:AC107373 EMBL:BC039237 EMBL:S70309
IPI:IPI00237671 PIR:S07144 RefSeq:NP_006149.2 UniGene:Hs.521461
ProteinModelPortal:P07196 SMR:P07196 IntAct:P07196
MINT:MINT-1370620 STRING:P07196 PhosphoSite:P07196 DMDM:62511894
UCD-2DPAGE:P07196 PaxDb:P07196 PRIDE:P07196 DNASU:4747 GeneID:4747
KEGG:hsa:4747 UCSC:uc003xee.3 GeneCards:GC08M024808 HGNC:HGNC:7739
MIM:162280 MIM:607684 MIM:607734 neXtProt:NX_P07196 Orphanet:99939
Orphanet:101085 Orphanet:228374 PharmGKB:PA31542 InParanoid:P07196
ChiTaRS:NEFL GenomeRNAi:4747 NextBio:18298 CleanEx:HS_NEFL
Genevestigator:P07196 GermOnline:ENSG00000104725 Uniprot:P07196
Length = 543
Score = 154 (59.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 61/255 (23%), Positives = 114/255 (44%)
Query: 43 APSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEI-TEVDPDGKFVKLYNKGSEEQSLG 101
A ++K+ L E E E T Q A+ E+ + D +G+ ++ KG++E +L
Sbjct: 153 ATNEKQALQ--GEREGLEETLRNLQ----ARYEEEVLSREDAEGRLMEA-RKGADEAALA 205
Query: 102 NWQLVRKVQGEV-KTSF--KFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQKFGS 158
+L +++ + + SF K H E + +VE +P + +K+ +
Sbjct: 206 RAELEKRIDSLMDEISFLKKVHEEEIAELQAQIQYAQISVEMDVTKPDLSAALKDIRAQY 265
Query: 159 GDEISTILLNTDGELANQERIIDNXXXXXXXXXXXXXXXXGRSG---KYDT-EMNELRAA 214
+ + N + ++ ++ S K T E+ R
Sbjct: 266 EKLAAKNMQNAEEWFKSRFTVLTESAAKNTDAVRAAKDEVSESRRLLKAKTLEIEACRGM 325
Query: 215 NYRLTERNKELEDQ----IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVE 270
N L ++ +ELED+ I Q ++E E++ ++EM LK+Y++L+ +K+ LD+E
Sbjct: 326 NEALEKQLQELEDKQNADISAMQDTINKLENELRTTKSEMARYLKEYQDLLNVKMALDIE 385
Query: 271 IAQYRNLMEAEESSL 285
IA YR L+E EE+ L
Sbjct: 386 IAAYRKLLEGEETRL 400
>UNIPROTKB|P48616 [details] [associations]
symbol:VIM "Vimentin" species:9913 "Bos taurus" [GO:0001701
"in utero embryonic development" evidence=TAS] [GO:0008150
"biological_process" evidence=ND] [GO:0005882 "intermediate
filament" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005200 "structural constituent of cytoskeleton" evidence=ISS]
[GO:0097110 "scaffold protein binding" evidence=IEA] [GO:0070307
"lens fiber cell development" evidence=IEA] [GO:0060020 "Bergmann
glial cell differentiation" evidence=IEA] [GO:0045109 "intermediate
filament organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0014002
"astrocyte development" evidence=IEA] [GO:0010977 "negative
regulation of neuron projection development" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] [GO:0005212 "structural
constituent of eye lens" evidence=IEA] InterPro:IPR001664
InterPro:IPR006821 Pfam:PF04732 GO:GO:0005829 GO:GO:0005886
GO:GO:0005737 GO:GO:0031252 GO:GO:0005777 GO:GO:0005200
GO:GO:0001701 GO:GO:0005882 GO:GO:0042995 GO:GO:0045109
HOGENOM:HOG000230977 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0005212 GO:GO:0070307 GO:GO:0014002 GO:GO:0010977
GeneTree:ENSGT00660000095344 GO:GO:0060020 eggNOG:NOG146769
EMBL:L13263 EMBL:BC118269 IPI:IPI00689228 RefSeq:NP_776394.2
UniGene:Bt.11149 ProteinModelPortal:P48616 SMR:P48616 IntAct:P48616
STRING:P48616 PRIDE:P48616 Ensembl:ENSBTAT00000024572 GeneID:280955
KEGG:bta:280955 CTD:7431 InParanoid:P48616 KO:K07606 OMA:INTEFKA
OrthoDB:EOG4GHZPD NextBio:20805065 ArrayExpress:P48616
Uniprot:P48616
Length = 466
Score = 152 (58.6 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 32/86 (37%), Positives = 53/86 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ L+ N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 329 EVDALKGTNESLERQMREMEENFSVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLN 388
Query: 263 IKINLDVEIAQYRNLMEAEES--SLP 286
+K+ LD+EIA YR L+E EES SLP
Sbjct: 389 VKMALDIEIATYRKLLEGEESRISLP 414
>UNIPROTKB|B0YJC4 [details] [associations]
symbol:VIM "Vimentin" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA]
InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732 GO:GO:0005198
GO:GO:0005882 GO:GO:0045111 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
EMBL:AL133415 EMBL:EF445046 UniGene:Hs.455493 UniGene:Hs.691131
HGNC:HGNC:12692 ChiTaRS:VIM IPI:IPI00975690 SMR:B0YJC4
STRING:B0YJC4 Ensembl:ENST00000487938 Uniprot:B0YJC4
Length = 431
Score = 151 (58.2 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 32/86 (37%), Positives = 53/86 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ L+ N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 329 EVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLN 388
Query: 263 IKINLDVEIAQYRNLMEAEES--SLP 286
+K+ LD+EIA YR L+E EES SLP
Sbjct: 389 VKMALDIEIATYRKLLEGEESRISLP 414
>UNIPROTKB|P48670 [details] [associations]
symbol:VIM "Vimentin" species:10029 "Cricetulus griseus"
[GO:0030496 "midbody" evidence=IDA] InterPro:IPR001664
InterPro:IPR006821 Pfam:PF04732 GO:GO:0005737 GO:GO:0005198
GO:GO:0005882 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0030496 EMBL:M16718 EMBL:X87227 PIR:I48128
ProteinModelPortal:P48670 SMR:P48670 PRIDE:P48670 Uniprot:P48670
Length = 448
Score = 151 (58.2 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 32/86 (37%), Positives = 53/86 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ L+ N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 311 EVDALKGTNESLERQMREMEENFALEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLN 370
Query: 263 IKINLDVEIAQYRNLMEAEES--SLP 286
+K+ LD+EIA YR L+E EES SLP
Sbjct: 371 VKMALDIEIATYRKLLEGEESRISLP 396
>UNIPROTKB|P08670 [details] [associations]
symbol:VIM "Vimentin" species:9606 "Homo sapiens"
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005212
"structural constituent of eye lens" evidence=IEA] [GO:0010977
"negative regulation of neuron projection development"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0045109 "intermediate filament
organization" evidence=IEA] [GO:0060020 "Bergmann glial cell
differentiation" evidence=IEA] [GO:0070307 "lens fiber cell
development" evidence=IEA] [GO:0005882 "intermediate filament"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005200
"structural constituent of cytoskeleton" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IDA;TAS] [GO:0006928 "cellular component
movement" evidence=TAS] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005777 "peroxisome" evidence=IDA]
[GO:0070062 "extracellular vesicular exosome" evidence=IDA]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006921 "cellular
component disassembly involved in execution phase of apoptosis"
evidence=TAS] [GO:0030049 "muscle filament sliding" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0097110
"scaffold protein binding" evidence=IPI] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] Reactome:REACT_578
InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732 GO:GO:0005829
GO:GO:0019048 GO:GO:0031252 Pathway_Interaction_DB:aurora_b_pathway
GO:GO:0005777 GO:GO:0005200 GO:GO:0030424 GO:GO:0070062
Pathway_Interaction_DB:caspase_pathway GO:GO:0005882 EMBL:CH471072
Reactome:REACT_17044 GO:GO:0030049 GO:GO:0006921 GO:GO:0045109
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0005212
GO:GO:0070307 GO:GO:0014002 Orphanet:98984 GO:GO:0010977 PDB:1GK6
PDBsum:1GK6 GO:GO:0060020 eggNOG:NOG146769 EMBL:AL133415 CTD:7431
KO:K07606 OMA:INTEFKA OrthoDB:EOG4GHZPD EMBL:M14144 EMBL:X56134
EMBL:AF328728 EMBL:Z19554 EMBL:AK056766 EMBL:AK097336 EMBL:AK290643
EMBL:CR407690 EMBL:AK222507 EMBL:AK222602 EMBL:EF445046
EMBL:BC000163 EMBL:BC030573 EMBL:BC066956 EMBL:X16478 EMBL:M18895
EMBL:M18888 EMBL:M18889 EMBL:M18890 EMBL:M18891 EMBL:M18892
EMBL:M18893 EMBL:M18894 EMBL:M25246 IPI:IPI00418471 PIR:S13115
RefSeq:NP_003371.2 UniGene:Hs.455493 UniGene:Hs.691131 PDB:1GK4
PDB:1GK7 PDB:3G1E PDB:3KLT PDB:3S4R PDB:3SSU PDB:3SWK PDB:3TRT
PDB:3UF1 PDBsum:1GK4 PDBsum:1GK7 PDBsum:3G1E PDBsum:3KLT
PDBsum:3S4R PDBsum:3SSU PDBsum:3SWK PDBsum:3TRT PDBsum:3UF1
ProteinModelPortal:P08670 SMR:P08670 IntAct:P08670 MINT:MINT-118802
STRING:P08670 PhosphoSite:P08670 DMDM:55977767
DOSAC-COBS-2DPAGE:P08670 OGP:P08670 REPRODUCTION-2DPAGE:IPI00418471
REPRODUCTION-2DPAGE:P08670 SWISS-2DPAGE:P08670 UCD-2DPAGE:P08670
PaxDb:P08670 PeptideAtlas:P08670 PRIDE:P08670 DNASU:7431
Ensembl:ENST00000224237 Ensembl:ENST00000544301 GeneID:7431
KEGG:hsa:7431 UCSC:uc001iou.2 GeneCards:GC10P017310
H-InvDB:HIX0035657 HGNC:HGNC:12692 HPA:CAB000080 HPA:HPA001762
MIM:193060 neXtProt:NX_P08670 PharmGKB:PA37311 InParanoid:P08670
PhylomeDB:P08670 ChiTaRS:VIM EvolutionaryTrace:P08670
GenomeRNAi:7431 NextBio:29104 PMAP-CutDB:P08670 ArrayExpress:P08670
Bgee:P08670 Genevestigator:P08670 GermOnline:ENSG00000026025
Uniprot:P08670
Length = 466
Score = 151 (58.2 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 32/86 (37%), Positives = 53/86 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ L+ N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 329 EVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLN 388
Query: 263 IKINLDVEIAQYRNLMEAEES--SLP 286
+K+ LD+EIA YR L+E EES SLP
Sbjct: 389 VKMALDIEIATYRKLLEGEESRISLP 414
>UNIPROTKB|P02543 [details] [associations]
symbol:VIM "Vimentin" species:9823 "Sus scrofa" [GO:0097110
"scaffold protein binding" evidence=IEA] [GO:0070307 "lens fiber
cell development" evidence=IEA] [GO:0060020 "Bergmann glial cell
differentiation" evidence=IEA] [GO:0045109 "intermediate filament
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0014002
"astrocyte development" evidence=IEA] [GO:0010977 "negative
regulation of neuron projection development" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005882 "intermediate filament"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005212 "structural constituent of
eye lens" evidence=IEA] [GO:0005200 "structural constituent of
cytoskeleton" evidence=IEA] InterPro:IPR001664 InterPro:IPR006821
Pfam:PF04732 GO:GO:0005198 GO:GO:0005882 HOGENOM:HOG000230977
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GeneTree:ENSGT00660000095344 eggNOG:NOG146769 KO:K07606 OMA:INTEFKA
EMBL:CU570641 PIR:S05207 RefSeq:XP_003130769.2 STRING:P02543
PRIDE:P02543 Ensembl:ENSSSCT00000012075 GeneID:100522394
KEGG:ssc:100522394 Uniprot:P02543
Length = 466
Score = 151 (58.2 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 32/86 (37%), Positives = 53/86 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ L+ N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 329 EVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLN 388
Query: 263 IKINLDVEIAQYRNLMEAEES--SLP 286
+K+ LD+EIA YR L+E EES SLP
Sbjct: 389 VKMALDIEIATYRKLLEGEESRISLP 414
>UNIPROTKB|P84198 [details] [associations]
symbol:VIM "Vimentin" species:9534 "Chlorocebus aethiops"
[GO:0005200 "structural constituent of cytoskeleton" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005882 "intermediate filament" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001664
InterPro:IPR006821 Pfam:PF04732 GO:GO:0005737 GO:GO:0005200
GO:GO:0005882 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
EMBL:DQ190949 ProteinModelPortal:P84198 SMR:P84198 IntAct:P84198
PRIDE:P84198 Uniprot:P84198
Length = 466
Score = 151 (58.2 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 32/86 (37%), Positives = 53/86 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ L+ N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 329 EVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLN 388
Query: 263 IKINLDVEIAQYRNLMEAEES--SLP 286
+K+ LD+EIA YR L+E EES SLP
Sbjct: 389 VKMALDIEIATYRKLLEGEESRISLP 414
>MGI|MGI:98932 [details] [associations]
symbol:Vim "vimentin" species:10090 "Mus musculus" [GO:0005198
"structural molecule activity" evidence=IMP] [GO:0005200
"structural constituent of cytoskeleton" evidence=ISO] [GO:0005212
"structural constituent of eye lens" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005777 "peroxisome" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO] [GO:0005856 "cytoskeleton"
evidence=ISO] [GO:0005882 "intermediate filament" evidence=ISO;IDA]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0010977
"negative regulation of neuron projection development"
evidence=IGI] [GO:0014002 "astrocyte development" evidence=IGI]
[GO:0019900 "kinase binding" evidence=ISO] [GO:0019901 "protein
kinase binding" evidence=ISO] [GO:0030424 "axon" evidence=ISO]
[GO:0031252 "cell leading edge" evidence=IDA] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0042995 "cell
projection" evidence=ISO;IDA] [GO:0044297 "cell body" evidence=ISO]
[GO:0045098 "type III intermediate filament" evidence=TAS]
[GO:0045103 "intermediate filament-based process" evidence=IMP]
[GO:0045109 "intermediate filament organization" evidence=IGI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0050770 "regulation of axonogenesis" evidence=ISO] [GO:0051721
"protein phosphatase 2A binding" evidence=ISO] [GO:0060020
"Bergmann glial cell differentiation" evidence=IMP] [GO:0060252
"positive regulation of glial cell proliferation" evidence=ISO]
[GO:0070062 "extracellular vesicular exosome" evidence=ISO]
[GO:0070307 "lens fiber cell development" evidence=IDA] [GO:0097110
"scaffold protein binding" evidence=ISO] [GO:1900147 "regulation of
Schwann cell migration" evidence=ISO] InterPro:IPR001664
InterPro:IPR006821 Pfam:PF04732 MGI:MGI:98932 GO:GO:0005829
GO:GO:0005886 GO:GO:0005737 GO:GO:0031252 GO:GO:0005777
GO:GO:0005200 GO:GO:0030424 GO:GO:0042995 GO:GO:0045109
HOGENOM:HOG000230977 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0005212 GO:GO:0070307 GO:GO:0014002 GO:GO:0010977
GO:GO:0045098 GO:GO:0060020 eggNOG:NOG146769 CTD:7431 KO:K07606
OMA:INTEFKA OrthoDB:EOG4GHZPD ChiTaRS:VIM EMBL:M24849 EMBL:X56397
EMBL:M26251 EMBL:Z22526 EMBL:X51438 EMBL:Y07738 EMBL:AK033175
EMBL:D50805 IPI:IPI00227299 PIR:A43803 RefSeq:NP_035831.2
UniGene:Mm.268000 ProteinModelPortal:P20152 SMR:P20152 DIP:DIP-188N
IntAct:P20152 MINT:MINT-1202726 STRING:P20152 PhosphoSite:P20152
REPRODUCTION-2DPAGE:IPI00227299 SWISS-2DPAGE:P20152
UCD-2DPAGE:P20152 PaxDb:P20152 PRIDE:P20152
Ensembl:ENSMUST00000028062 GeneID:22352 KEGG:mmu:22352
InParanoid:P20152 NextBio:302643 Bgee:P20152 CleanEx:MM_VIM
Genevestigator:P20152 GermOnline:ENSMUSG00000026728 Uniprot:P20152
Length = 466
Score = 151 (58.2 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 32/86 (37%), Positives = 53/86 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ L+ N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 329 EVDALKGTNESLERQMREMEENFALEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLN 388
Query: 263 IKINLDVEIAQYRNLMEAEES--SLP 286
+K+ LD+EIA YR L+E EES SLP
Sbjct: 389 VKMALDIEIATYRKLLEGEESRISLP 414
>RGD|621646 [details] [associations]
symbol:Vim "vimentin" species:10116 "Rattus norvegicus"
[GO:0005198 "structural molecule activity" evidence=ISO;TAS]
[GO:0005200 "structural constituent of cytoskeleton"
evidence=IEA;ISO;ISS] [GO:0005212 "structural constituent of eye
lens" evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO;ISS;IDA] [GO:0005777
"peroxisome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IEA;ISO;IDA] [GO:0005856 "cytoskeleton" evidence=ISO;IDA]
[GO:0005882 "intermediate filament" evidence=IEA;ISO;ISS]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0007568 "aging"
evidence=IEP] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0009314 "response to radiation" evidence=IEP]
[GO:0010043 "response to zinc ion" evidence=IEP] [GO:0010269
"response to selenium ion" evidence=IEP] [GO:0010977 "negative
regulation of neuron projection development" evidence=IEA;ISO]
[GO:0014002 "astrocyte development" evidence=IEA;ISO] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0019900 "kinase binding"
evidence=IPI] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030424 "axon" evidence=IDA] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0032355 "response to estradiol stimulus"
evidence=IEP] [GO:0033280 "response to vitamin D" evidence=IEP]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0042995 "cell projection" evidence=IEA;ISO;IDA] [GO:0043403
"skeletal muscle tissue regeneration" evidence=IEP] [GO:0044297
"cell body" evidence=IDA] [GO:0044344 "cellular response to
fibroblast growth factor stimulus" evidence=IEP] [GO:0045098 "type
III intermediate filament" evidence=TAS] [GO:0045103 "intermediate
filament-based process" evidence=ISO] [GO:0045109 "intermediate
filament organization" evidence=IEA;ISO] [GO:0045111 "intermediate
filament cytoskeleton" evidence=ISO] [GO:0045444 "fat cell
differentiation" evidence=IEP] [GO:0046697 "decidualization"
evidence=IEP] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050770 "regulation of axonogenesis"
evidence=IDA] [GO:0051721 "protein phosphatase 2A binding"
evidence=IDA] [GO:0060020 "Bergmann glial cell differentiation"
evidence=IEA;ISO] [GO:0060252 "positive regulation of glial cell
proliferation" evidence=IMP] [GO:0070062 "extracellular vesicular
exosome" evidence=ISO] [GO:0070307 "lens fiber cell development"
evidence=IEA;ISO] [GO:0097110 "scaffold protein binding"
evidence=IEA;ISO] [GO:1900147 "regulation of Schwann cell
migration" evidence=IDA] InterPro:IPR001664 InterPro:IPR006821
Pfam:PF04732 RGD:621646 GO:GO:0005829 GO:GO:0005886 GO:GO:0048471
GO:GO:0031252 GO:GO:0005777 GO:GO:0044344 GO:GO:0032355
GO:GO:0010043 GO:GO:0005200 GO:GO:0007568 GO:GO:0030424
GO:GO:0050770 GO:GO:0045109 HOGENOM:HOG000230977 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0016363 GO:GO:0045444
GO:GO:0009314 GO:GO:0051721 GO:GO:0010269 GO:GO:0033280
GO:GO:0005212 GO:GO:0044297 GO:GO:0046697 GO:GO:0070307
GO:GO:0014002 GO:GO:0010977 GO:GO:0043403 GO:GO:0045098
GO:GO:0060252 GO:GO:0060020 eggNOG:NOG146769 CTD:7431 KO:K07606
OrthoDB:EOG4GHZPD EMBL:X62952 EMBL:BC061847 EMBL:M84481
IPI:IPI00230941 PIR:S22119 RefSeq:NP_112402.1 UniGene:Rn.2710
ProteinModelPortal:P31000 SMR:P31000 IntAct:P31000 STRING:P31000
PhosphoSite:P31000 PRIDE:P31000 GeneID:81818 KEGG:rno:81818
UCSC:RGD:621646 InParanoid:P31000 NextBio:615731
Genevestigator:P31000 GermOnline:ENSRNOG00000018087 GO:GO:1900147
Uniprot:P31000
Length = 466
Score = 151 (58.2 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 32/86 (37%), Positives = 53/86 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ L+ N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 329 EVDALKGTNESLERQMREMEENFALEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLN 388
Query: 263 IKINLDVEIAQYRNLMEAEES--SLP 286
+K+ LD+EIA YR L+E EES SLP
Sbjct: 389 VKMALDIEIATYRKLLEGEESRISLP 414
>UNIPROTKB|F1NFH3 [details] [associations]
symbol:VIM "Vimentin" species:9031 "Gallus gallus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732 GO:GO:0005198
GO:GO:0005882 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GeneTree:ENSGT00660000095344 EMBL:AADN02000651 IPI:IPI00680144
Ensembl:ENSGALT00000031234 ArrayExpress:F1NFH3 Uniprot:F1NFH3
Length = 372
Score = 149 (57.5 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 29/83 (34%), Positives = 52/83 (62%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ L+ +N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 247 EVDALKGSNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLN 306
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 307 VKMALDIEIATYRKLLEGEESRI 329
>UNIPROTKB|P02544 [details] [associations]
symbol:VIM "Vimentin" species:10036 "Mesocricetus auratus"
[GO:0005200 "structural constituent of cytoskeleton" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005882 "intermediate
filament" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732
GO:GO:0005737 GO:GO:0005200 GO:GO:0005882 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 EMBL:K00927 EMBL:K00921 EMBL:K00922
EMBL:K00923 EMBL:K00924 EMBL:K00925 EMBL:K00926 PIR:A90842
ProteinModelPortal:P02544 SMR:P02544 PRIDE:P02544 Uniprot:P02544
Length = 465
Score = 151 (58.2 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 32/86 (37%), Positives = 53/86 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ L+ N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 328 EVDALKGTNESLERQMREMEENFALEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLN 387
Query: 263 IKINLDVEIAQYRNLMEAEES--SLP 286
+K+ LD+EIA YR L+E EES SLP
Sbjct: 388 VKMALDIEIATYRKLLEGEESRISLP 413
Score = 36 (17.7 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 36 TPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKG 74
T S GS+ PS R L + SS ++ SS G
Sbjct: 37 TYSLGSLRPSTSRSLYSSSPGGAYVTRSSAVRLRSSMPG 75
>UNIPROTKB|E2QSV7 [details] [associations]
symbol:NEFL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060052 "neurofilament cytoskeleton
organization" evidence=IEA] [GO:0050885 "neuromuscular process
controlling balance" evidence=IEA] [GO:0050772 "positive regulation
of axonogenesis" evidence=IEA] [GO:0045110 "intermediate filament
bundle assembly" evidence=IEA] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=IEA] [GO:0040011 "locomotion"
evidence=IEA] [GO:0031133 "regulation of axon diameter"
evidence=IEA] [GO:0014012 "peripheral nervous system axon
regeneration" evidence=IEA] [GO:0005883 "neurofilament"
evidence=IEA] [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732
GO:GO:0000226 GO:GO:0005198 GO:GO:0050885 GO:GO:0040011
GO:GO:0043524 GO:GO:0050772 GO:GO:0005883 GO:GO:0060052
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0014012 GO:GO:0031133
GO:GO:0045110 Ensembl:ENSCAFT00000014332 Uniprot:E2QSV7
Length = 473
Score = 150 (57.9 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 60/256 (23%), Positives = 113/256 (44%)
Query: 43 APSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEI-TEVDPDGKFVKLYNKGSEEQSLG 101
A ++K+ L E E E T Q A+ E+ + D +G+ ++ KG++E +L
Sbjct: 153 ATNEKQALQ--GEREGLEETLRNLQ----ARYEEEVLSREDAEGRLMEA-RKGADEAALA 205
Query: 102 NWQLVRKVQG---EVKTSFKFHRTLKIEAGGTVTVWSFNVE-GATHEPPHNIVMKNQKFG 157
+L +++ E+ K H E + +VE + +P + +K+ +
Sbjct: 206 RAELEKRIDSLMDEIAFLKKVHEEEIAELQAQIQYAQISVEMDVSSKPDLSAALKDIRAQ 265
Query: 158 SGDEISTILLNTDGELANQERIIDNXXXXXXXXXXXXXXXXGRSG---KYDT-EMNELRA 213
+ + N + ++ ++ S K T E+ R
Sbjct: 266 YEKLAAKNMQNAEEWFKSRFTVLTESAAKNTDAVRAAKDEVSESRRLLKAKTLEIEACRG 325
Query: 214 ANYRLTERNKELEDQ----IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDV 269
N L ++ +ELED+ I Q ++E E++ ++EM LK+Y++L+ +K+ LD+
Sbjct: 326 MNEALEKQLQELEDKQNADISAMQDTINKLENELRTTKSEMARYLKEYQDLLNVKMALDI 385
Query: 270 EIAQYRNLMEAEESSL 285
EIA YR L+E EE+ L
Sbjct: 386 EIAAYRKLLEGEETRL 401
>UNIPROTKB|F1NE70 [details] [associations]
symbol:GFAP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005882 "intermediate
filament" evidence=IEA] [GO:0010625 "positive regulation of Schwann
cell proliferation" evidence=IEA] [GO:0010977 "negative regulation
of neuron projection development" evidence=IEA] [GO:0014002
"astrocyte development" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0031102 "neuron projection regeneration"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0044297 "cell body" evidence=IEA] [GO:0045109 "intermediate
filament organization" evidence=IEA] [GO:0051580 "regulation of
neurotransmitter uptake" evidence=IEA] [GO:0060020 "Bergmann glial
cell differentiation" evidence=IEA] [GO:0060291 "long-term synaptic
potentiation" evidence=IEA] InterPro:IPR001664 InterPro:IPR006821
Pfam:PF04732 GO:GO:0005737 GO:GO:0005198 GO:GO:0060291
GO:GO:0030198 GO:GO:0005882 GO:GO:0042995 GO:GO:0045109
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0044297
GeneTree:ENSGT00660000095344 OMA:ASSNMQE GO:GO:0051580
EMBL:AADN02053934 IPI:IPI00586028 Ensembl:ENSGALT00000001337
Uniprot:F1NE70
Length = 434
Score = 149 (57.5 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 31/83 (37%), Positives = 52/83 (62%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRELME 262
++ LR +N L + +ELE++ E S + R+E +I L+ EM L++Y++L+
Sbjct: 297 DLEALRGSNESLERQLRELEERYALETSAYQDTVGRLEEDIHSLKEEMGRHLQEYQDLLN 356
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 357 VKLALDIEIATYRKLLEGEESRI 379
>UNIPROTKB|F1NXT0 [details] [associations]
symbol:VIM "Vimentin" species:9031 "Gallus gallus"
[GO:0005200 "structural constituent of cytoskeleton" evidence=IEA]
[GO:0005212 "structural constituent of eye lens" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0010977 "negative regulation
of neuron projection development" evidence=IEA] [GO:0014002
"astrocyte development" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0045109 "intermediate filament organization" evidence=IEA]
[GO:0060020 "Bergmann glial cell differentiation" evidence=IEA]
[GO:0070307 "lens fiber cell development" evidence=IEA] [GO:0097110
"scaffold protein binding" evidence=IEA] InterPro:IPR001664
InterPro:IPR006821 Pfam:PF04732 GO:GO:0005829 GO:GO:0005886
GO:GO:0031252 GO:GO:0005777 GO:GO:0005200 GO:GO:0005882
GO:GO:0042995 GO:GO:0045109 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0005212
GeneTree:ENSGT00660000095344 EMBL:AADN02000651 IPI:IPI00821004
Ensembl:ENSGALT00000038306 ArrayExpress:F1NXT0 Uniprot:F1NXT0
Length = 457
Score = 149 (57.5 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 29/83 (34%), Positives = 52/83 (62%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ L+ +N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 320 EVDALKGSNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLN 379
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 380 VKMALDIEIATYRKLLEGEESRI 402
>RGD|621458 [details] [associations]
symbol:Nefl "neurofilament, light polypeptide" species:10116
"Rattus norvegicus" [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA;ISO] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005200 "structural constituent of
cytoskeleton" evidence=ISO] [GO:0005882 "intermediate filament"
evidence=ISO] [GO:0005883 "neurofilament" evidence=IEA;ISO]
[GO:0006950 "response to stress" evidence=IEP] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0008089 "anterograde axon
cargo transport" evidence=ISO] [GO:0008090 "retrograde axon cargo
transport" evidence=ISO] [GO:0009636 "response to toxic substance"
evidence=IEP] [GO:0010033 "response to organic substance"
evidence=IEP] [GO:0010243 "response to organic nitrogen"
evidence=IEP] [GO:0014012 "peripheral nervous system axon
regeneration" evidence=IEA;ISO] [GO:0019896 "axon transport of
mitochondrion" evidence=ISO] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0030424 "axon" evidence=ISO;IDA]
[GO:0030426 "growth cone" evidence=IDA] [GO:0031133 "regulation of
axon diameter" evidence=IEA;ISO] [GO:0033693 "neurofilament bundle
assembly" evidence=ISO] [GO:0040011 "locomotion" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=ISO] [GO:0043005
"neuron projection" evidence=ISO;IDA] [GO:0043274 "phospholipase
binding" evidence=IPI] [GO:0043434 "response to peptide hormone
stimulus" evidence=IEP] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA;ISO] [GO:0045109 "intermediate
filament organization" evidence=ISO] [GO:0045110 "intermediate
filament bundle assembly" evidence=IEA;ISO] [GO:0048812 "neuron
projection morphogenesis" evidence=ISO] [GO:0050772 "positive
regulation of axonogenesis" evidence=IEA;ISO] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA;ISO]
[GO:0051258 "protein polymerization" evidence=IDA] [GO:0051412
"response to corticosterone stimulus" evidence=IEP] [GO:0060052
"neurofilament cytoskeleton organization" evidence=IEA;ISO]
[GO:0097458 "neuron part" evidence=ISO] [GO:0033596 "TSC1-TSC2
complex" evidence=ISO] InterPro:IPR001664 InterPro:IPR006821
Pfam:PF04732 RGD:621458 GO:GO:0000226 GO:GO:0051412 GO:GO:0005198
GO:GO:0009636 GO:GO:0030424 GO:GO:0043434 GO:GO:0050885
GO:GO:0040011 GO:GO:0043524 GO:GO:0030426 GO:GO:0050772
GeneTree:ENSGT00690000102043 HOGENOM:HOG000230977
HOVERGEN:HBG013015 GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0051258 GO:GO:0014012 GO:GO:0031133 GO:GO:0045110 CTD:4747
eggNOG:NOG145720 KO:K04572 OMA:PRVHISS OrthoDB:EOG42Z4QC
EMBL:AF031880 EMBL:M25638 EMBL:X53981 IPI:IPI00231302 PIR:A21762
PIR:I60434 RefSeq:NP_113971.1 UniGene:Rn.18568
ProteinModelPortal:P19527 SMR:P19527 DIP:DIP-1N IntAct:P19527
STRING:P19527 GlycoSuiteDB:P19527 PhosphoSite:P19527
World-2DPAGE:0004:P19527 PRIDE:P19527 Ensembl:ENSRNOT00000018599
GeneID:83613 KEGG:rno:83613 UCSC:RGD:621458 InParanoid:P19527
NextBio:616157 Genevestigator:P19527 GermOnline:ENSRNOG00000013658
Uniprot:P19527
Length = 542
Score = 150 (57.9 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 60/256 (23%), Positives = 113/256 (44%)
Query: 43 APSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEI-TEVDPDGKFVKLYNKGSEEQSLG 101
A ++K+ L E E E T Q A+ E+ + D +G+ ++ KG++E +L
Sbjct: 153 ATNEKQALQ--GEREGLEETLRNLQ----ARYEEEVLSREDAEGRLMEA-RKGADEAALA 205
Query: 102 NWQLVRKVQG---EVKTSFKFHRTLKIEAGGTVTVWSFNVE-GATHEPPHNIVMKNQKFG 157
+L +++ E+ K H E + +VE + +P + +K+ +
Sbjct: 206 RAELEKRIDSLMDEIAFLKKVHEEEIAELQAQIQYAQISVEMDVSSKPDLSAALKDIRAQ 265
Query: 158 SGDEISTILLNTDGELANQERIIDNXXXXXXXXXXXXXXXXGRSG---KYDT-EMNELRA 213
+ + N + ++ ++ S K T E+ R
Sbjct: 266 YEKLAAKNMQNAEEWFKSRFTVLTESAAKNTDAVRAAKDEVSESRRLLKAKTLEIEACRG 325
Query: 214 ANYRLTERNKELEDQ----IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDV 269
N L ++ +ELED+ I Q ++E E++ ++EM LK+Y++L+ +K+ LD+
Sbjct: 326 MNEALEKQLQELEDKQNADISAMQDTINKLENELRSTKSEMARYLKEYQDLLNVKMALDI 385
Query: 270 EIAQYRNLMEAEESSL 285
EIA YR L+E EE+ L
Sbjct: 386 EIAAYRKLLEGEETRL 401
>MGI|MGI:97313 [details] [associations]
symbol:Nefl "neurofilament, light polypeptide" species:10090
"Mus musculus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IMP] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005200 "structural constituent of cytoskeleton"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005882 "intermediate filament" evidence=IDA] [GO:0005883
"neurofilament" evidence=ISO;IDA] [GO:0008022 "protein C-terminus
binding" evidence=ISO] [GO:0008089 "anterograde axon cargo
transport" evidence=ISO] [GO:0008090 "retrograde axon cargo
transport" evidence=ISO] [GO:0014012 "peripheral nervous system
axon regeneration" evidence=IMP] [GO:0019896 "axon transport of
mitochondrion" evidence=ISO] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0030424 "axon" evidence=ISO;IDA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031133 "regulation of
axon diameter" evidence=IMP] [GO:0033693 "neurofilament bundle
assembly" evidence=ISO] [GO:0040011 "locomotion" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=ISO] [GO:0043005
"neuron projection" evidence=ISO;IDA] [GO:0043274 "phospholipase
binding" evidence=ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IMP] [GO:0045109 "intermediate filament
organization" evidence=ISO;IMP] [GO:0045110 "intermediate filament
bundle assembly" evidence=IGI] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0050772 "positive regulation of
axonogenesis" evidence=IMP] [GO:0050885 "neuromuscular process
controlling balance" evidence=IMP] [GO:0051258 "protein
polymerization" evidence=ISO] [GO:0060052 "neurofilament
cytoskeleton organization" evidence=IGI;IMP] [GO:0097458 "neuron
part" evidence=IDA] InterPro:IPR001664 InterPro:IPR006821
Pfam:PF04732 MGI:MGI:97313 GO:GO:0000226 GO:GO:0051412
GO:GO:0005198 GO:GO:0009636 GO:GO:0043434 GO:GO:0050885
GO:GO:0040011 GO:GO:0043524 GO:GO:0030426 GO:GO:0050772
GeneTree:ENSGT00690000102043 HOGENOM:HOG000230977
HOVERGEN:HBG013015 GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0051258 GO:GO:0014012 GO:GO:0031133 GO:GO:0045110 CTD:4747
eggNOG:NOG145720 KO:K04572 OMA:PRVHISS OrthoDB:EOG42Z4QC
ChiTaRS:NEFL EMBL:M20480 EMBL:M13016 EMBL:DQ201635 EMBL:BC029203
EMBL:AH002053 EMBL:X02165 IPI:IPI00554928 PIR:A25227
RefSeq:NP_035040.1 UniGene:Mm.1956 ProteinModelPortal:P08551
SMR:P08551 DIP:DIP-31944N IntAct:P08551 STRING:P08551
PhosphoSite:P08551 UCD-2DPAGE:P08551 PaxDb:P08551 PRIDE:P08551
Ensembl:ENSMUST00000022639 GeneID:18039 KEGG:mmu:18039
UCSC:uc007uln.1 InParanoid:P08551 NextBio:293145 Bgee:P08551
CleanEx:MM_NEFL Genevestigator:P08551 GermOnline:ENSMUSG00000022055
Uniprot:P08551
Length = 543
Score = 150 (57.9 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 60/256 (23%), Positives = 113/256 (44%)
Query: 43 APSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEI-TEVDPDGKFVKLYNKGSEEQSLG 101
A ++K+ L E E E T Q A+ E+ + D +G+ ++ KG++E +L
Sbjct: 153 ATNEKQALQ--GEREGLEETLRNLQ----ARYEEEVLSREDAEGRLMEA-RKGADEAALA 205
Query: 102 NWQLVRKVQG---EVKTSFKFHRTLKIEAGGTVTVWSFNVE-GATHEPPHNIVMKNQKFG 157
+L +++ E+ K H E + +VE + +P + +K+ +
Sbjct: 206 RAELEKRIDSLMDEIAFLKKVHEEEIAELQAQIQYAQISVEMDVSSKPDLSAALKDIRAQ 265
Query: 158 SGDEISTILLNTDGELANQERIIDNXXXXXXXXXXXXXXXXGRSG---KYDT-EMNELRA 213
+ + N + ++ ++ S K T E+ R
Sbjct: 266 YEKLAAKNMQNAEEWFKSRFTVLTESAAKNTDAVRAAKDEVSESRRLLKAKTLEIEACRG 325
Query: 214 ANYRLTERNKELEDQ----IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDV 269
N L ++ +ELED+ I Q ++E E++ ++EM LK+Y++L+ +K+ LD+
Sbjct: 326 MNEALEKQLQELEDKQNADISAMQDTINKLENELRSTKSEMARYLKEYQDLLNVKMALDI 385
Query: 270 EIAQYRNLMEAEESSL 285
EIA YR L+E EE+ L
Sbjct: 386 EIAAYRKLLEGEETRL 401
>UNIPROTKB|F6UNV5 [details] [associations]
symbol:LOC100856220 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005882 "intermediate filament"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732
GO:GO:0005198 GO:GO:0005882 GeneTree:ENSGT00690000102043
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 KO:K04572 OMA:PRVHISS
Ensembl:ENSCAFT00000014332 EMBL:AAEX03014354 RefSeq:XP_003639928.1
GeneID:100856220 KEGG:cfa:100856220 Uniprot:F6UNV5
Length = 544
Score = 150 (57.9 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 60/256 (23%), Positives = 113/256 (44%)
Query: 43 APSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEI-TEVDPDGKFVKLYNKGSEEQSLG 101
A ++K+ L E E E T Q A+ E+ + D +G+ ++ KG++E +L
Sbjct: 153 ATNEKQALQ--GEREGLEETLRNLQ----ARYEEEVLSREDAEGRLMEA-RKGADEAALA 205
Query: 102 NWQLVRKVQG---EVKTSFKFHRTLKIEAGGTVTVWSFNVE-GATHEPPHNIVMKNQKFG 157
+L +++ E+ K H E + +VE + +P + +K+ +
Sbjct: 206 RAELEKRIDSLMDEIAFLKKVHEEEIAELQAQIQYAQISVEMDVSSKPDLSAALKDIRAQ 265
Query: 158 SGDEISTILLNTDGELANQERIIDNXXXXXXXXXXXXXXXXGRSG---KYDT-EMNELRA 213
+ + N + ++ ++ S K T E+ R
Sbjct: 266 YEKLAAKNMQNAEEWFKSRFTVLTESAAKNTDAVRAAKDEVSESRRLLKAKTLEIEACRG 325
Query: 214 ANYRLTERNKELEDQ----IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDV 269
N L ++ +ELED+ I Q ++E E++ ++EM LK+Y++L+ +K+ LD+
Sbjct: 326 MNEALEKQLQELEDKQNADISAMQDTINKLENELRTTKSEMARYLKEYQDLLNVKMALDI 385
Query: 270 EIAQYRNLMEAEESSL 285
EIA YR L+E EE+ L
Sbjct: 386 EIAAYRKLLEGEETRL 401
>UNIPROTKB|F1NJ08 [details] [associations]
symbol:VIM "Vimentin" species:9031 "Gallus gallus"
[GO:0005200 "structural constituent of cytoskeleton" evidence=IEA]
[GO:0005212 "structural constituent of eye lens" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0010977 "negative regulation
of neuron projection development" evidence=IEA] [GO:0014002
"astrocyte development" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0045109 "intermediate filament organization" evidence=IEA]
[GO:0060020 "Bergmann glial cell differentiation" evidence=IEA]
[GO:0070307 "lens fiber cell development" evidence=IEA] [GO:0097110
"scaffold protein binding" evidence=IEA] InterPro:IPR001664
InterPro:IPR006821 Pfam:PF04732 GO:GO:0005829 GO:GO:0005886
GO:GO:0031252 GO:GO:0005777 GO:GO:0005200 GO:GO:0005882
GO:GO:0042995 GO:GO:0045109 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0005212
GeneTree:ENSGT00660000095344 IPI:IPI00596934 EMBL:AADN02000651
Ensembl:ENSGALT00000014123 ArrayExpress:F1NJ08 Uniprot:F1NJ08
Length = 460
Score = 149 (57.5 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 29/83 (34%), Positives = 52/83 (62%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ L+ +N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 323 EVDALKGSNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLN 382
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 383 VKMALDIEIATYRKLLEGEESRI 405
>UNIPROTKB|P09654 [details] [associations]
symbol:VIM "Vimentin" species:9031 "Gallus gallus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732 GO:GO:0005198
GO:GO:0005882 HOGENOM:HOG000230977 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 eggNOG:NOG146769 CTD:7431 KO:K07606
EMBL:M15852 EMBL:M15850 EMBL:M15851 EMBL:V00447 IPI:IPI00596934
PIR:A29329 RefSeq:NP_001041541.1 UniGene:Gga.9346
ProteinModelPortal:P09654 SMR:P09654 IntAct:P09654 STRING:P09654
PRIDE:P09654 GeneID:420519 KEGG:gga:420519 InParanoid:P09654
NextBio:20823416 Uniprot:P09654
Length = 460
Score = 149 (57.5 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 29/83 (34%), Positives = 52/83 (62%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ L+ +N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 323 EVDALKGSNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLN 382
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 383 VKMALDIEIATYRKLLEGEESRI 405
>UNIPROTKB|P02547 [details] [associations]
symbol:NEFL "Neurofilament light polypeptide" species:9823
"Sus scrofa" [GO:0005883 "neurofilament" evidence=ISS] [GO:0008090
"retrograde axon cargo transport" evidence=ISS] [GO:0008089
"anterograde axon cargo transport" evidence=ISS] [GO:0045109
"intermediate filament organization" evidence=ISS] [GO:0042802
"identical protein binding" evidence=ISS] [GO:0033596 "TSC1-TSC2
complex" evidence=ISS] [GO:0030424 "axon" evidence=ISS] [GO:0019896
"axon transport of mitochondrion" evidence=ISS] [GO:0008022
"protein C-terminus binding" evidence=ISS] [GO:0005200 "structural
constituent of cytoskeleton" evidence=ISS] [GO:0033693
"neurofilament bundle assembly" evidence=ISS] InterPro:IPR001664
InterPro:IPR006821 Pfam:PF04732 GO:GO:0005200 GO:GO:0042802
GO:GO:0008089 GO:GO:0019896 GO:GO:0008090 GO:GO:0008022
HOGENOM:HOG000230977 HOVERGEN:HBG013015 GO:GO:0005883
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 eggNOG:NOG145720 OrthoDB:EOG42Z4QC
GO:GO:0033693 PIR:A91337 DisProt:DP00151 ProteinModelPortal:P02547
SMR:P02547 STRING:P02547 Uniprot:P02547
Length = 549
Score = 150 (57.9 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 60/256 (23%), Positives = 113/256 (44%)
Query: 43 APSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEI-TEVDPDGKFVKLYNKGSEEQSLG 101
A ++K+ L E E E T Q A+ E+ + D +G+ ++ KG++E +L
Sbjct: 152 ATNEKQALQ--GEREGLEETLRNLQ----ARYEEEVLSREDAEGRLMEA-RKGADEAALA 204
Query: 102 NWQLVRKVQG---EVKTSFKFHRTLKIEAGGTVTVWSFNVE-GATHEPPHNIVMKNQKFG 157
+L +++ E+ K H E + +VE + +P + +K+ +
Sbjct: 205 RAELEKRIDSLMDEIAFLKKVHEEEIAELQAQIQYAQISVEMDVSSKPDLSAALKDIRAQ 264
Query: 158 SGDEISTILLNTDGELANQERIIDNXXXXXXXXXXXXXXXXGRSG---KYDT-EMNELRA 213
+ + N + ++ ++ S K T E+ R
Sbjct: 265 YEKLAAKNMQNAEEWFKSRFTVLTESAAKNTDAVRAAKDEVSESRRLLKAKTLEIEACRG 324
Query: 214 ANYRLTERNKELEDQ----IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDV 269
N L ++ +ELED+ I Q ++E E++ ++EM LK+Y++L+ +K+ LD+
Sbjct: 325 MNEALEKQLQELEDKQNADISAMQDTINKLENELRTTKSEMARYLKEYQDLLNVKMALDI 384
Query: 270 EIAQYRNLMEAEESSL 285
EIA YR L+E EE+ L
Sbjct: 385 EIAAYRKLLEGEETRL 400
>UNIPROTKB|F1RJU4 [details] [associations]
symbol:NEFL "Neurofilament light polypeptide" species:9823
"Sus scrofa" [GO:0060052 "neurofilament cytoskeleton organization"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0050772 "positive regulation of
axonogenesis" evidence=IEA] [GO:0045110 "intermediate filament
bundle assembly" evidence=IEA] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=IEA] [GO:0040011 "locomotion"
evidence=IEA] [GO:0031133 "regulation of axon diameter"
evidence=IEA] [GO:0014012 "peripheral nervous system axon
regeneration" evidence=IEA] [GO:0005883 "neurofilament"
evidence=IEA] [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732
GO:GO:0000226 GO:GO:0005198 GO:GO:0050885 GO:GO:0040011
GO:GO:0043524 GO:GO:0050772 GeneTree:ENSGT00690000102043
GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0014012
GO:GO:0031133 GO:GO:0045110 CTD:4747 KO:K04572 OMA:PRVHISS
EMBL:CT978650 RefSeq:NP_001231260.1 UniGene:Ssc.10769
UniGene:Ssc.20298 Ensembl:ENSSSCT00000010578 GeneID:100521224
KEGG:ssc:100521224 Uniprot:F1RJU4
Length = 552
Score = 150 (57.9 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 60/256 (23%), Positives = 113/256 (44%)
Query: 43 APSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEI-TEVDPDGKFVKLYNKGSEEQSLG 101
A ++K+ L E E E T Q A+ E+ + D +G+ ++ KG++E +L
Sbjct: 153 ATNEKQALQ--GEREGLEETLRNLQ----ARYEEEVLSREDAEGRLMEA-RKGADEAALA 205
Query: 102 NWQLVRKVQG---EVKTSFKFHRTLKIEAGGTVTVWSFNVE-GATHEPPHNIVMKNQKFG 157
+L +++ E+ K H E + +VE + +P + +K+ +
Sbjct: 206 RAELEKRIDSLMDEIAFLKKVHEEEIAELQAQIQYAQISVEMDVSSKPDLSAALKDIRAQ 265
Query: 158 SGDEISTILLNTDGELANQERIIDNXXXXXXXXXXXXXXXXGRSG---KYDT-EMNELRA 213
+ + N + ++ ++ S K T E+ R
Sbjct: 266 YEKLAAKNMQNAEEWFKSRFTVLTESAAKNTDAVRAAKDEVSESRRLLKAKTLEIEACRG 325
Query: 214 ANYRLTERNKELEDQ----IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDV 269
N L ++ +ELED+ I Q ++E E++ ++EM LK+Y++L+ +K+ LD+
Sbjct: 326 MNEALEKQLQELEDKQNADISAMQDTINKLENELRTTKSEMARYLKEYQDLLNVKMALDI 385
Query: 270 EIAQYRNLMEAEESSL 285
EIA YR L+E EE+ L
Sbjct: 386 EIAAYRKLLEGEETRL 401
>UNIPROTKB|P02548 [details] [associations]
symbol:NEFL "Neurofilament light polypeptide" species:9913
"Bos taurus" [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0031133 "regulation of axon diameter"
evidence=ISS] [GO:0060052 "neurofilament cytoskeleton organization"
evidence=ISS] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISS] [GO:0050772 "positive regulation of
axonogenesis" evidence=ISS] [GO:0045110 "intermediate filament
bundle assembly" evidence=ISS] [GO:0045109 "intermediate filament
organization" evidence=ISS] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=ISS] [GO:0040011 "locomotion"
evidence=ISS] [GO:0014012 "peripheral nervous system axon
regeneration" evidence=ISS] [GO:0005883 "neurofilament"
evidence=ISS] [GO:0005882 "intermediate filament" evidence=ISS]
[GO:0000226 "microtubule cytoskeleton organization" evidence=ISS]
[GO:0030424 "axon" evidence=ISS] [GO:0008089 "anterograde axon
cargo transport" evidence=ISS] [GO:0008022 "protein C-terminus
binding" evidence=ISS] [GO:0008090 "retrograde axon cargo
transport" evidence=ISS] [GO:0042802 "identical protein binding"
evidence=ISS] [GO:0033596 "TSC1-TSC2 complex" evidence=ISS]
[GO:0019896 "axon transport of mitochondrion" evidence=ISS]
[GO:0005200 "structural constituent of cytoskeleton" evidence=ISS]
[GO:0033693 "neurofilament bundle assembly" evidence=ISS]
InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732 GO:GO:0000226
GO:GO:0005200 GO:GO:0050885 GO:GO:0040011 GO:GO:0043524
GO:GO:0042802 GO:GO:0050772 GO:GO:0008089 GO:GO:0019896
GO:GO:0008090 GO:GO:0008022 GeneTree:ENSGT00690000102043
HOGENOM:HOG000230977 HOVERGEN:HBG013015 GO:GO:0005883
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0014012 GO:GO:0031133
EMBL:U83919 EMBL:BC118240 IPI:IPI00717196 PIR:JW0094
RefSeq:NP_776546.1 UniGene:Bt.89013 ProteinModelPortal:P02548
SMR:P02548 IntAct:P02548 STRING:P02548 PRIDE:P02548
Ensembl:ENSBTAT00000029264 GeneID:281348 KEGG:bta:281348 CTD:4747
eggNOG:NOG145720 InParanoid:P02548 KO:K04572 OMA:PRVHISS
OrthoDB:EOG42Z4QC NextBio:20805356 GO:GO:0033693 Uniprot:P02548
Length = 555
Score = 150 (57.9 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 60/256 (23%), Positives = 113/256 (44%)
Query: 43 APSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEI-TEVDPDGKFVKLYNKGSEEQSLG 101
A ++K+ L E E E T Q A+ E+ + D +G+ ++ KG++E +L
Sbjct: 153 ATNEKQALQ--GEREGLEETLRNLQ----ARYEEEVLSREDAEGRLMEA-RKGADEAALA 205
Query: 102 NWQLVRKVQG---EVKTSFKFHRTLKIEAGGTVTVWSFNVE-GATHEPPHNIVMKNQKFG 157
+L +++ E+ K H E + +VE + +P + +K+ +
Sbjct: 206 RAELEKRIDSLMDEIAFLKKVHEEEIAELQAQIQYAQISVEMDVSSKPDLSAALKDIRAQ 265
Query: 158 SGDEISTILLNTDGELANQERIIDNXXXXXXXXXXXXXXXXGRSG---KYDT-EMNELRA 213
+ + N + ++ ++ S K T E+ R
Sbjct: 266 YEKLAAKNMQNAEEWFKSRFTVLTESAAKNTDAVRAAKDEVSESRRLLKAKTLEIEACRG 325
Query: 214 ANYRLTERNKELEDQ----IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDV 269
N L ++ +ELED+ I Q ++E E++ ++EM LK+Y++L+ +K+ LD+
Sbjct: 326 MNEALEKQLQELEDKQNADISAMQDTINKLENELRTTKSEMARYLKEYQDLLNVKMALDI 385
Query: 270 EIAQYRNLMEAEESSL 285
EIA YR L+E EE+ L
Sbjct: 386 EIAAYRKLLEGEETRL 401
>UNIPROTKB|E9PSK2 [details] [associations]
symbol:RGD1305207 "Protein RGD1305207" species:10116
"Rattus norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0045095 "keratin filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095 PANTHER:PTHR23239:SF18
GeneTree:ENSGT00670000098177 IPI:IPI00471513
Ensembl:ENSRNOT00000010881 RGD:1305207 Uniprot:E9PSK2
Length = 179
Score = 130 (50.8 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ K A +EA ++R + +M QL++Y+ELM +K+ LD EIA YR L+E EE L
Sbjct: 65 KGKLAWLEAALQRARQDMARQLREYQELMIVKLGLDFEIATYRRLLEGEEQRL 117
>UNIPROTKB|F1PLS4 [details] [associations]
symbol:VIM "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0097110 "scaffold protein binding"
evidence=IEA] [GO:0070307 "lens fiber cell development"
evidence=IEA] [GO:0060020 "Bergmann glial cell differentiation"
evidence=IEA] [GO:0045109 "intermediate filament organization"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0031252
"cell leading edge" evidence=IEA] [GO:0014002 "astrocyte
development" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005777 "peroxisome"
evidence=IEA] [GO:0005212 "structural constituent of eye lens"
evidence=IEA] [GO:0005200 "structural constituent of cytoskeleton"
evidence=IEA] InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732
GO:GO:0005829 GO:GO:0005886 GO:GO:0031252 GO:GO:0005777
GO:GO:0005200 GO:GO:0005882 GO:GO:0042995 GO:GO:0045109
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0005212 GO:GO:0070307
GO:GO:0014002 GO:GO:0010977 GeneTree:ENSGT00660000095344
GO:GO:0060020 CTD:7431 KO:K07606 OMA:INTEFKA EMBL:AAEX03001246
RefSeq:XP_856478.1 UniGene:Cfa.25093 ProteinModelPortal:F1PLS4
Ensembl:ENSCAFT00000007304 GeneID:477991 KEGG:cfa:477991
NextBio:20853381 Uniprot:F1PLS4
Length = 466
Score = 148 (57.2 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 29/83 (34%), Positives = 51/83 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ L+ N L + +E+E+ E Q R++ EI+ ++ EM L++Y++L+
Sbjct: 329 EVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLN 388
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES +
Sbjct: 389 VKMALDIEIATYRKLLEGEESRI 411
>UNIPROTKB|F1PW98 [details] [associations]
symbol:KRT8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045095 "keratin filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095
GeneTree:ENSGT00670000097847 OMA:TSGPRSF EMBL:AAEX03015001
EMBL:AAEX03015002 Ensembl:ENSCAFT00000011536 Uniprot:F1PW98
Length = 493
Score = 146 (56.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 29/79 (36%), Positives = 49/79 (62%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIK 264
+T N+ A + + + E ++ +K A +EA ++R + +M QL++Y+ELM +K
Sbjct: 330 ETLKNQRAALEAAIADAEQRGELAVKDANAKVAELEAALQRAKQDMARQLREYQELMNVK 389
Query: 265 INLDVEIAQYRNLMEAEES 283
+ LD+EIA YR L+E EES
Sbjct: 390 LALDIEIATYRKLLEGEES 408
>UNIPROTKB|F1MU12 [details] [associations]
symbol:KRT8 "Keratin, type II cytoskeletal 8" species:9913
"Bos taurus" [GO:0045095 "keratin filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095
GeneTree:ENSGT00670000097847 IPI:IPI00685418 OMA:TSGPRSF
EMBL:DAAA02012876 EMBL:DAAA02012877 Ensembl:ENSBTAT00000001108
Uniprot:F1MU12
Length = 478
Score = 145 (56.1 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E ++ Q+K A +EA ++ + +M QL++Y+ELM +K+ LDVEIA YR L+E EES L
Sbjct: 350 EMAVKDAQAKLAELEAALRNAKQDMARQLREYQELMNVKLALDVEIATYRKLLEGEESRL 409
>UNIPROTKB|P05786 [details] [associations]
symbol:KRT8 "Keratin, type II cytoskeletal 8" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0045095 "keratin filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005737
GO:GO:0005654 GO:GO:0005198 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0016363 GO:GO:0045095 HOGENOM:HOG000230976 eggNOG:NOG146769
KO:K07605 EMBL:BC103339 EMBL:K03532 EMBL:X12877 IPI:IPI00685418
PIR:A25004 RefSeq:NP_001028782.1 UniGene:Bt.23608
ProteinModelPortal:P05786 STRING:P05786 PRIDE:P05786 GeneID:281269
KEGG:bta:281269 CTD:3856 InParanoid:P05786 OrthoDB:EOG4XKV78
NextBio:20805305 Uniprot:P05786
Length = 478
Score = 145 (56.1 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E ++ Q+K A +EA ++ + +M QL++Y+ELM +K+ LDVEIA YR L+E EES L
Sbjct: 350 EMAVKDAQAKLAELEAALRNAKQDMARQLREYQELMNVKLALDVEIATYRKLLEGEESRL 409
>MGI|MGI:96705 [details] [associations]
symbol:Krt8 "keratin 8" species:10090 "Mus musculus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=TAS] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005882 "intermediate filament" evidence=ISO;IDA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=TAS] [GO:0016010
"dystrophin-associated glycoprotein complex" evidence=ISO]
[GO:0030018 "Z disc" evidence=ISO;IDA] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033209 "tumor necrosis factor-mediated
signaling pathway" evidence=IGI;IMP] [GO:0042383 "sarcolemma"
evidence=ISO;IDA] [GO:0043034 "costamere" evidence=ISO] [GO:0045095
"keratin filament" evidence=ISO] [GO:0045214 "sarcomere
organization" evidence=ISO] [GO:0051599 "response to hydrostatic
pressure" evidence=ISO] [GO:0051707 "response to other organism"
evidence=IMP] [GO:0060706 "cell differentiation involved in
embryonic placenta development" evidence=IGI] [GO:0071944 "cell
periphery" evidence=IDA] [GO:0097110 "scaffold protein binding"
evidence=ISO] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
MGI:MGI:96705 GO:GO:0006915 GO:GO:0005654 GO:GO:0030018
GO:GO:0005198 GO:GO:0005882 GO:GO:0051707 GO:GO:0042383
GO:GO:0033209 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0016363 InterPro:IPR009053 SUPFAM:SSF46579 GO:GO:0045095
GO:GO:0000904 GO:GO:0060706 eggNOG:NOG146769 KO:K07605
GeneTree:ENSGT00670000097847 CTD:3856 OrthoDB:EOG4XKV78 EMBL:X12789
EMBL:X15662 EMBL:M21836 EMBL:M22831 EMBL:D90360 EMBL:AK077597
EMBL:AK145546 EMBL:AK145679 EMBL:AK145777 EMBL:AK146948
EMBL:AK147044 EMBL:AK166737 EMBL:AK166768 EMBL:AK166854
EMBL:AK166960 EMBL:AK166993 EMBL:AK167120 EMBL:AK167269
EMBL:AK167471 EMBL:AK168522 EMBL:AK168540 EMBL:AK168561
EMBL:AK168726 EMBL:AK168910 EMBL:AK169136 EMBL:AK169691
EMBL:BC094009 EMBL:BC106154 IPI:IPI00322209 PIR:JS0658 PIR:JT0407
PIR:S05474 RefSeq:NP_112447.2 UniGene:Mm.358618
ProteinModelPortal:P11679 SMR:P11679 STRING:P11679
PhosphoSite:P11679 SWISS-2DPAGE:P11679 PaxDb:P11679 PRIDE:P11679
Ensembl:ENSMUST00000023952 GeneID:16691 KEGG:mmu:16691
UCSC:uc007xui.1 InParanoid:P11679 OMA:TSGPRSF NextBio:290445
Bgee:P11679 CleanEx:MM_KRT8 Genevestigator:P11679
GermOnline:ENSMUSG00000049382 Uniprot:P11679
Length = 490
Score = 145 (56.1 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E I+ Q+K A +EA ++R + +M QL++Y+ELM +K+ LD+EI YR L+E EES L
Sbjct: 349 EMAIKDAQTKLAELEAALQRAKQDMARQLREYQELMNVKLALDIEITTYRKLLEGEESRL 408
>MGI|MGI:96568 [details] [associations]
symbol:Ina "internexin neuronal intermediate filament protein,
alpha" species:10090 "Mus musculus" [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005883 "neurofilament" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0045104 "intermediate filament
cytoskeleton organization" evidence=IMP] [GO:0060052 "neurofilament
cytoskeleton organization" evidence=IGI] InterPro:IPR001664
InterPro:IPR006821 Pfam:PF04732 MGI:MGI:96568 GO:GO:0007399
GO:GO:0030154 GO:GO:0005198 GO:GO:0042246 CTD:9118 eggNOG:NOG149366
GeneTree:ENSGT00690000102043 HOGENOM:HOG000230977
HOVERGEN:HBG013015 KO:K07608 OrthoDB:EOG4R5031 GO:GO:0005883
GO:GO:0060052 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 ChiTaRS:INA
EMBL:L27220 EMBL:L36390 EMBL:BC018383 IPI:IPI00135965 PIR:I53868
RefSeq:NP_666212.3 UniGene:Mm.276251 ProteinModelPortal:P46660
SMR:P46660 IntAct:P46660 MINT:MINT-136763 STRING:P46660
PhosphoSite:P46660 UCD-2DPAGE:P46660 PaxDb:P46660 PRIDE:P46660
Ensembl:ENSMUST00000037636 GeneID:226180 KEGG:mmu:226180
UCSC:uc008huk.1 InParanoid:P46660 NextBio:378052 Bgee:P46660
Genevestigator:P46660 GermOnline:ENSMUSG00000034336 Uniprot:P46660
Length = 504
Score = 145 (56.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 30/85 (35%), Positives = 52/85 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ LR AN L + ELE++ E Q ++E++++ ++EM L++Y++L+
Sbjct: 325 EIEGLRGANESLERQILELEERHSAEVAGYQDSIGQLESDLRNTKSEMARHLREYQDLLN 384
Query: 263 IKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EE+ T
Sbjct: 385 VKMALDIEIAAYRKLLEGEETRFST 409
>RGD|2911 [details] [associations]
symbol:Ina "internexin neuronal intermediate filament protein,
alpha" species:10116 "Rattus norvegicus" [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005882 "intermediate filament"
evidence=IEA] [GO:0005883 "neurofilament" evidence=IEA;ISO]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0042246 "tissue
regeneration" evidence=IEP] [GO:0045104 "intermediate filament
cytoskeleton organization" evidence=ISO] [GO:0060052 "neurofilament
cytoskeleton organization" evidence=IEA;ISO] InterPro:IPR001664
InterPro:IPR006821 Pfam:PF04732 RGD:2911 GO:GO:0007399 GO:GO:0030154
GO:GO:0005198 GO:GO:0042246 CTD:9118 eggNOG:NOG149366
HOGENOM:HOG000230977 HOVERGEN:HBG013015 KO:K07608 OrthoDB:EOG4R5031
GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 EMBL:X52017
EMBL:M73049 IPI:IPI00211936 PIR:A41023 RefSeq:NP_062001.1
UniGene:Rn.88941 ProteinModelPortal:P23565 SMR:P23565
MINT:MINT-4589517 STRING:P23565 PhosphoSite:P23565
World-2DPAGE:0004:P23565 PRIDE:P23565 GeneID:24503 KEGG:rno:24503
UCSC:RGD:2911 InParanoid:P23565 NextBio:603511 Genevestigator:P23565
GermOnline:ENSRNOG00000020248 Uniprot:P23565
Length = 505
Score = 145 (56.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 30/85 (35%), Positives = 52/85 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ LR AN L + ELE++ E Q ++E++++ ++EM L++Y++L+
Sbjct: 325 EIEGLRGANESLERQILELEERHSAEVAGYQDSIGQLESDLRNTKSEMARHLREYQDLLN 384
Query: 263 IKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EE+ T
Sbjct: 385 VKMALDIEIAAYRKLLEGEETRFST 409
>UNIPROTKB|P23565 [details] [associations]
symbol:Ina "Alpha-internexin" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732
RGD:2911 GO:GO:0007399 GO:GO:0030154 GO:GO:0005198 GO:GO:0042246
CTD:9118 eggNOG:NOG149366 HOGENOM:HOG000230977 HOVERGEN:HBG013015
KO:K07608 OrthoDB:EOG4R5031 GO:GO:0005883 GO:GO:0060052
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 EMBL:X52017 EMBL:M73049
IPI:IPI00211936 PIR:A41023 RefSeq:NP_062001.1 UniGene:Rn.88941
ProteinModelPortal:P23565 SMR:P23565 MINT:MINT-4589517
STRING:P23565 PhosphoSite:P23565 World-2DPAGE:0004:P23565
PRIDE:P23565 GeneID:24503 KEGG:rno:24503 UCSC:RGD:2911
InParanoid:P23565 NextBio:603511 Genevestigator:P23565
GermOnline:ENSRNOG00000020248 Uniprot:P23565
Length = 505
Score = 145 (56.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 30/85 (35%), Positives = 52/85 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ LR AN L + ELE++ E Q ++E++++ ++EM L++Y++L+
Sbjct: 325 EIEGLRGANESLERQILELEERHSAEVAGYQDSIGQLESDLRNTKSEMARHLREYQDLLN 384
Query: 263 IKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EE+ T
Sbjct: 385 VKMALDIEIAAYRKLLEGEETRFST 409
>UNIPROTKB|F1RFH3 [details] [associations]
symbol:NEFH "Neurofilament heavy polypeptide" species:9823
"Sus scrofa" [GO:0060052 "neurofilament cytoskeleton organization"
evidence=IEA] [GO:0045110 "intermediate filament bundle assembly"
evidence=IEA] [GO:0005883 "neurofilament" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA] GO:GO:0005739 GO:GO:0000226
GeneTree:ENSGT00690000102043 GO:GO:0005883 GO:GO:0060052
InterPro:IPR016044 InterPro:IPR018039 Pfam:PF00038 PROSITE:PS00226
OMA:VECDPTG GO:GO:0045110 EMBL:CU468008 Ensembl:ENSSSCT00000010935
Uniprot:F1RFH3
Length = 519
Score = 145 (56.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 29/81 (35%), Positives = 51/81 (62%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
TE+ L++ L + ELED+ + + Q +++AE++ + EM QL++Y++L+
Sbjct: 325 TELEALKSTKDSLERQRSELEDRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLL 384
Query: 262 EIKINLDVEIAQYRNLMEAEE 282
+K+ LD+EIA YR L+E EE
Sbjct: 385 NVKMALDIEIAAYRKLLEGEE 405
>UNIPROTKB|F1SGG2 [details] [associations]
symbol:KRT8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060706 "cell differentiation involved in embryonic
placenta development" evidence=IEA] [GO:0051707 "response to other
organism" evidence=IEA] [GO:0042383 "sarcolemma" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0030018 "Z disc" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0045095 "keratin filament"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
GO:GO:0006915 GO:GO:0030018 GO:GO:0005198 GO:GO:0051707
GO:GO:0042383 GO:GO:0033209 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095
GO:GO:0060706 KO:K07605 GeneTree:ENSGT00670000097847 CTD:3856
OMA:TSGPRSF EMBL:CU457755 RefSeq:NP_001153087.1 UniGene:Ssc.53699
Ensembl:ENSSSCT00000000271 GeneID:100152077 KEGG:ssc:100152077
ArrayExpress:F1SGG2 Uniprot:F1SGG2
Length = 489
Score = 144 (55.7 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 30/66 (45%), Positives = 45/66 (68%)
Query: 220 ERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLME 279
E+ EL ++ Q+K A +EA ++ + +M QL++Y+ELM +K+ LDVEIA YR L+E
Sbjct: 347 EQRGELA--VKDAQAKLAELEAALRTAKQDMARQLREYQELMNVKLALDVEIATYRKLLE 404
Query: 280 AEESSL 285
EES L
Sbjct: 405 GEESRL 410
>ZFIN|ZDB-GENE-990415-83 [details] [associations]
symbol:inab "internexin neuronal intermediate
filament protein, alpha b" species:7955 "Danio rerio" [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0005882
"intermediate filament" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001664
InterPro:IPR006821 Pfam:PF04732 ZFIN:ZDB-GENE-990415-83
GO:GO:0005198 GO:GO:0005882 eggNOG:NOG149366 HOGENOM:HOG000230977
HOVERGEN:HBG013015 KO:K07608 OrthoDB:EOG4R5031 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
HSSP:P08670 EMBL:U89710 IPI:IPI00484287 RefSeq:NP_571107.1
UniGene:Dr.75101 ProteinModelPortal:P87360 SMR:P87360 PRIDE:P87360
GeneID:30230 KEGG:dre:30230 CTD:30230 InParanoid:P87360
NextBio:20806686 ArrayExpress:P87360 Bgee:P87360 Uniprot:P87360
Length = 471
Score = 143 (55.4 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ LR N L + E+ED+ E Q +E +++ ++EM L++Y++L+
Sbjct: 316 EIESLRGTNESLERQIHEMEDRHNAEIMGYQDSIGELENDLRTTKSEMARHLREYQDLLN 375
Query: 263 IKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EE+ + T
Sbjct: 376 VKMALDIEIAAYRKLLEGEETRIST 400
>UNIPROTKB|Q08DH7 [details] [associations]
symbol:INA "Alpha-internexin" species:9913 "Bos taurus"
[GO:0060052 "neurofilament cytoskeleton organization" evidence=IEA]
[GO:0005883 "neurofilament" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] InterPro:IPR001664 InterPro:IPR006821
Pfam:PF04732 GO:GO:0007399 GO:GO:0030154 GO:GO:0005198
EMBL:BC123743 IPI:IPI00691285 RefSeq:NP_001069426.1
UniGene:Bt.65345 ProteinModelPortal:Q08DH7 SMR:Q08DH7 STRING:Q08DH7
PRIDE:Q08DH7 Ensembl:ENSBTAT00000003517 GeneID:532236
KEGG:bta:532236 CTD:9118 eggNOG:NOG149366
GeneTree:ENSGT00690000102043 HOGENOM:HOG000230977
HOVERGEN:HBG013015 InParanoid:Q08DH7 KO:K07608 OMA:ASSYRKV
OrthoDB:EOG4R5031 NextBio:20875638 GO:GO:0005883 GO:GO:0060052
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 Uniprot:Q08DH7
Length = 499
Score = 142 (55.0 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 30/85 (35%), Positives = 51/85 (60%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ LR AN L + ELE++ E Q ++E +++ ++EM L++Y++L+
Sbjct: 325 EIEGLRGANESLERQILELEERHSAEVASYQDNIGQLENDLRNTKSEMARHLREYQDLLN 384
Query: 263 IKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EE+ T
Sbjct: 385 VKMALDIEIAAYRKLLEGEETRFST 409
>UNIPROTKB|Q16352 [details] [associations]
symbol:INA "Alpha-internexin" species:9606 "Homo sapiens"
[GO:0007399 "nervous system development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005883 "neurofilament"
evidence=IEA] [GO:0060052 "neurofilament cytoskeleton organization"
evidence=IEA] [GO:0005200 "structural constituent of cytoskeleton"
evidence=TAS] InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732
GO:GO:0007399 GO:GO:0030154 GO:GO:0005200 EMBL:CH471066
GO:GO:0042246 CTD:9118 eggNOG:NOG149366 HOGENOM:HOG000230977
HOVERGEN:HBG013015 KO:K07608 OMA:ASSYRKV OrthoDB:EOG4R5031
GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 EMBL:S78296
EMBL:AL591408 EMBL:BC006359 IPI:IPI00001453 PIR:I52658
RefSeq:NP_116116.1 UniGene:Hs.500916 ProteinModelPortal:Q16352
SMR:Q16352 IntAct:Q16352 STRING:Q16352 PhosphoSite:Q16352
DMDM:20141266 PaxDb:Q16352 PeptideAtlas:Q16352 PRIDE:Q16352
DNASU:9118 Ensembl:ENST00000369849 GeneID:9118 KEGG:hsa:9118
UCSC:uc001kws.3 GeneCards:GC10P105026 HGNC:HGNC:6057 HPA:CAB002059
HPA:HPA008057 MIM:605338 neXtProt:NX_Q16352 PharmGKB:PA29867
InParanoid:Q16352 PhylomeDB:Q16352 ChiTaRS:INA GenomeRNAi:9118
NextBio:34171 ArrayExpress:Q16352 Bgee:Q16352 CleanEx:HS_INA
Genevestigator:Q16352 GermOnline:ENSG00000148798 Uniprot:Q16352
Length = 499
Score = 142 (55.0 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 30/85 (35%), Positives = 51/85 (60%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ LR AN L + ELE++ E Q ++E +++ ++EM L++Y++L+
Sbjct: 325 EIEGLRGANESLERQILELEERHSAEVAGYQDSIGQLENDLRNTKSEMARHLREYQDLLN 384
Query: 263 IKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EE+ T
Sbjct: 385 VKMALDIEIAAYRKLLEGEETRFST 409
>UNIPROTKB|F1S847 [details] [associations]
symbol:INA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060052 "neurofilament cytoskeleton organization"
evidence=IEA] [GO:0005883 "neurofilament" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR001664
InterPro:IPR006821 Pfam:PF04732 GO:GO:0005198 CTD:9118
GeneTree:ENSGT00690000102043 KO:K07608 OMA:ASSYRKV GO:GO:0005883
GO:GO:0060052 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 EMBL:CT737204
RefSeq:XP_001929355.3 Ensembl:ENSSSCT00000011589 GeneID:100153400
KEGG:ssc:100153400 Uniprot:F1S847
Length = 499
Score = 142 (55.0 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 30/85 (35%), Positives = 51/85 (60%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ LR AN L + ELE++ E Q ++E +++ ++EM L++Y++L+
Sbjct: 325 EIEGLRGANESLERQILELEERHSAEVASYQDNIGQLENDLRNTKSEMARHLREYQDLLN 384
Query: 263 IKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EE+ T
Sbjct: 385 VKMALDIEIAAYRKLLEGEETRFST 409
>UNIPROTKB|E2RE99 [details] [associations]
symbol:INA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060052 "neurofilament cytoskeleton
organization" evidence=IEA] [GO:0005883 "neurofilament"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732
GO:GO:0005198 CTD:9118 GeneTree:ENSGT00690000102043 KO:K07608
OMA:ASSYRKV GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
EMBL:AAEX03015496 RefSeq:XP_543999.1 Ensembl:ENSCAFT00000016481
GeneID:486869 KEGG:cfa:486869 NextBio:20860578 Uniprot:E2RE99
Length = 500
Score = 142 (55.0 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 30/85 (35%), Positives = 51/85 (60%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ LR AN L + ELE++ E Q ++E +++ ++EM L++Y++L+
Sbjct: 325 EIEGLRGANESLERQILELEERHSAEVASYQDSIGQLENDLRNTKSEMARHLREYQDLLN 384
Query: 263 IKINLDVEIAQYRNLMEAEESSLPT 287
+K+ LD+EIA YR L+E EE+ T
Sbjct: 385 VKMALDIEIAAYRKLLEGEETRFST 409
>UNIPROTKB|E2RS09 [details] [associations]
symbol:GFAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060291 "long-term synaptic potentiation"
evidence=IEA] [GO:0060020 "Bergmann glial cell differentiation"
evidence=IEA] [GO:0051580 "regulation of neurotransmitter uptake"
evidence=IEA] [GO:0045109 "intermediate filament organization"
evidence=IEA] [GO:0044297 "cell body" evidence=IEA] [GO:0042995
"cell projection" evidence=IEA] [GO:0031102 "neuron projection
regeneration" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0010977
"negative regulation of neuron projection development"
evidence=IEA] [GO:0010625 "positive regulation of Schwann cell
proliferation" evidence=IEA] [GO:0005882 "intermediate filament"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR001664
InterPro:IPR006821 Pfam:PF04732 GO:GO:0005737 GO:GO:0005198
GO:GO:0060291 GO:GO:0030198 GO:GO:0005882 GO:GO:0042995
GO:GO:0031102 GO:GO:0045109 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0044297
GO:GO:0014002 GO:GO:0010977 GeneTree:ENSGT00660000095344 CTD:2670
KO:K05640 OMA:ASSNMQE GO:GO:0060020 GO:GO:0010625 GO:GO:0051580
EMBL:AAEX03006409 RefSeq:XP_848378.1 Ensembl:ENSCAFT00000022175
GeneID:480495 KEGG:cfa:480495 NextBio:20855505 Uniprot:E2RS09
Length = 433
Score = 141 (54.7 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
++ LR N L + +E E++ E Q AR+E E + L+ EM L++Y++L+
Sbjct: 296 DLESLRGTNESLERQMREQEERHAREAASYQEALARLEEEGQNLKDEMARHLQEYQDLLN 355
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EE+ +
Sbjct: 356 VKLALDIEIATYRKLLEGEENRI 378
>UNIPROTKB|F1PTY1 [details] [associations]
symbol:KRT1 "Keratin, type II cytoskeletal 1" species:9615
"Canis lupus familiaris" [GO:0045095 "keratin filament"
evidence=IEA] [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0001867 "complement
activation, lectin pathway" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] InterPro:IPR001664
InterPro:IPR003054 PRINTS:PR01276 GO:GO:0016020 GO:GO:0005198
GO:GO:0030246 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095
GO:GO:0001867 PANTHER:PTHR23239:SF18 GeneTree:ENSGT00610000085977
OMA:THSLEPY EMBL:AAEX03015006 Ensembl:ENSCAFT00000011567
Uniprot:F1PTY1
Length = 619
Score = 143 (55.4 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 28/81 (34%), Positives = 50/81 (61%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIK 264
D+ ++ A +++ + E+ ++ QSK A +E +++ + +M L+DY+ELM K
Sbjct: 414 DSVKKQISALQQSISDAEQRGENALKDAQSKLAELEDALQKAKEDMARLLRDYQELMNTK 473
Query: 265 INLDVEIAQYRNLMEAEESSL 285
+ LD+EIA YR L+E EES +
Sbjct: 474 LALDMEIATYRTLLEGEESRM 494
>UNIPROTKB|Q6EIY9 [details] [associations]
symbol:KRT1 "Keratin, type II cytoskeletal 1" species:9615
"Canis lupus familiaris" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045095 "keratin filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005886
GO:GO:0005198 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045095 HSSP:P08670 HOGENOM:HOG000230976
PANTHER:PTHR23239:SF18 KO:K07605 EMBL:AY318945
RefSeq:NP_001003392.1 UniGene:Cfa.10761 ProteinModelPortal:Q6EIY9
PRIDE:Q6EIY9 GeneID:444857 KEGG:cfa:444857 CTD:3848
NextBio:20831748 Uniprot:Q6EIY9
Length = 619
Score = 143 (55.4 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 28/81 (34%), Positives = 50/81 (61%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIK 264
D+ ++ A +++ + E+ ++ QSK A +E +++ + +M L+DY+ELM K
Sbjct: 414 DSVKKQISALQQSISDAEQRGENALKDAQSKLAELEDALQKAKEDMARLLRDYQELMNTK 473
Query: 265 INLDVEIAQYRNLMEAEESSL 285
+ LD+EIA YR L+E EES +
Sbjct: 474 LALDMEIATYRTLLEGEESRM 494
>UNIPROTKB|E9PBF6 [details] [associations]
symbol:LMNB1 "Lamin-B1" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005638 "lamin
filament" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0043274 "phospholipase binding" evidence=IEA]
InterPro:IPR001664 GO:GO:0005635 GO:GO:0005654 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0016363 GO:GO:0005638
HGNC:HGNC:6637 ChiTaRS:LMNB1 EMBL:AC137794 IPI:IPI00790831
ProteinModelPortal:E9PBF6 SMR:E9PBF6 PRIDE:E9PBF6
Ensembl:ENST00000395354 ArrayExpress:E9PBF6 Bgee:E9PBF6
Uniprot:E9PBF6
Length = 387
Score = 140 (54.3 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 29/81 (35%), Positives = 51/81 (62%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDYRELM 261
++++ L+ + ER +ELED + E+ RM E E+ ++ +M +QL DY +L+
Sbjct: 305 SQLSNLQKESRACLERIQELEDLLAKEKDNSRRMLTDKEREMAEIRDQMQQQLNDYEQLL 364
Query: 262 EIKINLDVEIAQYRNLMEAEE 282
++K+ LD+EI+ YR L+E EE
Sbjct: 365 DVKLALDMEISAYRKLLEGEE 385
>ZFIN|ZDB-GENE-050208-726 [details] [associations]
symbol:si:dkey-222f2.1 "si:dkey-222f2.1"
species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0045095 "keratin filament"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
ZFIN:ZDB-GENE-050208-726 GO:GO:0005198 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
InterPro:IPR009053 SUPFAM:SSF46579 GO:GO:0045095 EMBL:BX005329
PANTHER:PTHR23239:SF18 KO:K07605 GeneTree:ENSGT00670000097847
IPI:IPI00489645 RefSeq:XP_696736.2 UniGene:Dr.84163
Ensembl:ENSDART00000063484 GeneID:568321 KEGG:dre:568321
NextBio:20889108 Bgee:F1RDG4 Uniprot:F1RDG4
Length = 438
Score = 134 (52.2 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 27/87 (31%), Positives = 51/87 (58%)
Query: 203 KYDTEMNELRAANYRLTERNKELEDQ----IEYEQSKFARMEAEIKRLQTEMTEQLKDYR 258
+ +E+ ++A L + E ED+ ++ + + +E ++R + +M QL++Y+
Sbjct: 304 RLQSEIEVIKAQRANLENQIAEAEDRGEMTVKEAKGRIKDLEEALQRAKQDMARQLREYQ 363
Query: 259 ELMEIKINLDVEIAQYRNLMEAEESSL 285
ELM +K+ LD+EIA YR L+E EE +
Sbjct: 364 ELMNVKLALDIEIATYRKLLEGEEDRI 390
Score = 45 (20.9 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 28/105 (26%), Positives = 46/105 (43%)
Query: 80 EVDPDGKFVKLYNKGSEEQSLGNW--QLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFN 137
E+DP+ + V+ K + +SL N + KV+ ++ K T K E T T N
Sbjct: 67 EIDPNIQMVRTQEK-EQIKSLNNRFATFIDKVRF-LEQQNKMLET-KWELLQTQTPGRSN 123
Query: 138 VEGATHEPPHNIVMKNQKFGSGDEISTILLNTDGELANQERIIDN 182
VE P M N + D ++ DGEL N + ++++
Sbjct: 124 VE-----PMFEAYMANLR-RQMDVVNNDRTKLDGELRNMQGLVED 162
>UNIPROTKB|G3X8G9 [details] [associations]
symbol:G3X8G9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045095 "keratin filament" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR001664
InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045095 GeneTree:ENSGT00670000097847 EMBL:DAAA02029316
Ensembl:ENSBTAT00000064433 OMA:TEKENDF Uniprot:G3X8G9
Length = 468
Score = 141 (54.7 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
E ++ Q+K A +EA ++ + +M +QL++Y+ELM K+ LDVEIA YR L+E EES L
Sbjct: 340 EMAVKDAQAKLAELEAALRNAKQDMAQQLREYQELMNDKLALDVEIATYRKLLEGEESRL 399
>UNIPROTKB|P12036 [details] [associations]
symbol:NEFH "Neurofilament heavy polypeptide" species:9606
"Homo sapiens" [GO:0008219 "cell death" evidence=IEA] [GO:0000226
"microtubule cytoskeleton organization" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0045110 "intermediate filament
bundle assembly" evidence=IEA] [GO:0060052 "neurofilament
cytoskeleton organization" evidence=IEA] [GO:0005883
"neurofilament" evidence=NAS] [GO:0007399 "nervous system
development" evidence=NAS] [GO:0030424 "axon" evidence=TAS]
[GO:0003674 "molecular_function" evidence=ND] GO:GO:0005739
GO:GO:0007399 GO:GO:0000226 GO:GO:0008219 eggNOG:NOG12793
HOGENOM:HOG000230977 HOVERGEN:HBG013015 GO:GO:0005883 GO:GO:0060052
InterPro:IPR016044 InterPro:IPR018039 Pfam:PF00038 PROSITE:PS00226
Orphanet:803 MIM:105400 GO:GO:0045110 EMBL:X15306 EMBL:X15307
EMBL:X15308 EMBL:X15309 EMBL:AF203032 EMBL:AB020652 EMBL:AK302660
EMBL:AC000035 EMBL:BC008648 EMBL:BC073969 IPI:IPI00386758
IPI:IPI00910602 PIR:S00979 RefSeq:NP_066554.2 UniGene:Hs.198760
ProteinModelPortal:P12036 SMR:P12036 IntAct:P12036 STRING:P12036
PhosphoSite:P12036 DMDM:226726294 UCD-2DPAGE:P12036 PaxDb:P12036
PRIDE:P12036 Ensembl:ENST00000310624 GeneID:4744 KEGG:hsa:4744
CTD:4744 GeneCards:GC22P029876 H-InvDB:HIX0016351 HGNC:HGNC:7737
HPA:CAB007786 MIM:162230 neXtProt:NX_P12036 PharmGKB:PA31540
InParanoid:P12036 KO:K04574 OrthoDB:EOG4NS3BW GenomeRNAi:4744
NextBio:18288 ArrayExpress:P12036 Bgee:P12036 CleanEx:HS_NEFH
Genevestigator:P12036 GermOnline:ENSG00000100285 InterPro:IPR010790
Pfam:PF07142 Uniprot:P12036
Length = 1026
Score = 145 (56.1 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 29/81 (35%), Positives = 51/81 (62%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
TE+ L++ L + ELED+ + + Q +++AE++ + EM QL++Y++L+
Sbjct: 330 TELEALKSTKDSLERQRSELEDRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLL 389
Query: 262 EIKINLDVEIAQYRNLMEAEE 282
+K+ LD+EIA YR L+E EE
Sbjct: 390 NVKMALDIEIAAYRKLLEGEE 410
>UNIPROTKB|P05787 [details] [associations]
symbol:KRT8 "Keratin, type II cytoskeletal 8" species:9606
"Homo sapiens" [GO:0045095 "keratin filament" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0005882 "intermediate filament" evidence=IDA;NAS]
[GO:0007010 "cytoskeleton organization" evidence=NAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0097110 "scaffold protein binding" evidence=IPI]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005737
GO:GO:0019048 GO:GO:0007010 GO:GO:0005654 GO:GO:0005198
Pathway_Interaction_DB:p38alphabetadownstreampathway GO:GO:0005882
EMBL:CH471054 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0016363 DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031
DrugBank:DB00015 GO:GO:0045095 MIM:215600 eggNOG:NOG146769
KO:K07605 EMBL:AC107016 CTD:3856 OrthoDB:EOG4XKV78 EMBL:M34482
EMBL:M34225 EMBL:X74929 EMBL:X74981 EMBL:U76549 EMBL:AK290938
EMBL:AK310257 EMBL:AK315826 EMBL:AK222941 EMBL:BC000654
EMBL:BC063513 EMBL:BC073760 EMBL:BC075839 EMBL:M26512 EMBL:X12882
EMBL:X98614 IPI:IPI00554648 IPI:IPI01021414 PIR:A34720
RefSeq:NP_001243222.1 RefSeq:NP_002264.1 UniGene:Hs.533782
UniGene:Hs.708445 ProteinModelPortal:P05787 SMR:P05787 DIP:DIP-424N
IntAct:P05787 MINT:MINT-256526 STRING:P05787 GlycoSuiteDB:P05787
PhosphoSite:P05787 DMDM:90110027 SWISS-2DPAGE:P05787 PaxDb:P05787
PeptideAtlas:P05787 PRIDE:P05787 DNASU:3856 Ensembl:ENST00000293308
Ensembl:ENST00000546897 Ensembl:ENST00000552150
Ensembl:ENST00000552551 GeneID:3856 KEGG:hsa:3856 UCSC:uc001sbd.2
GeneCards:GC12M053290 H-InvDB:HIX0026255 H-InvDB:HIX0034365
H-InvDB:HIX0168895 HGNC:HGNC:6446 HPA:CAB000131 HPA:CAB001696
HPA:HPA049866 MIM:148060 neXtProt:NX_P05787 PharmGKB:PA30234
InParanoid:P05787 PhylomeDB:P05787 GenomeRNAi:3856 NextBio:15173
PMAP-CutDB:P05787 ArrayExpress:P05787 Bgee:P05787
Genevestigator:P05787 GermOnline:ENSG00000170421 Uniprot:P05787
Length = 483
Score = 141 (54.7 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 220 ERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLME 279
E+ EL I+ +K + +EA ++R + +M QL++Y+ELM +K+ LD+EIA YR L+E
Sbjct: 339 EQRGELA--IKDANAKLSELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLE 396
Query: 280 AEESSL 285
EES L
Sbjct: 397 GEESRL 402
>RGD|2679 [details] [associations]
symbol:Gfap "glial fibrillary acidic protein" species:10116 "Rattus
norvegicus" [GO:0005178 "integrin binding" evidence=IDA] [GO:0005198
"structural molecule activity" evidence=IEA;ISO] [GO:0005200
"structural constituent of cytoskeleton" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005882 "intermediate filament"
evidence=IEA;ISO;NAS;TAS] [GO:0009611 "response to wounding"
evidence=IDA] [GO:0010625 "positive regulation of Schwann cell
proliferation" evidence=IEA;ISO] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA;ISO] [GO:0014002
"astrocyte development" evidence=IEA;ISO] [GO:0016020 "membrane"
evidence=IEA;ISO] [GO:0019900 "kinase binding" evidence=IPI]
[GO:0030198 "extracellular matrix organization" evidence=IEA;ISO]
[GO:0031102 "neuron projection regeneration" evidence=IEA;ISO]
[GO:0042995 "cell projection" evidence=IEA;ISO] [GO:0044297 "cell
body" evidence=IEA;ISO] [GO:0044464 "cell part" evidence=ISO]
[GO:0045103 "intermediate filament-based process" evidence=ISO]
[GO:0045109 "intermediate filament organization" evidence=IEA;ISO]
[GO:0051580 "regulation of neurotransmitter uptake" evidence=IEA;ISO]
[GO:0060020 "Bergmann glial cell differentiation" evidence=IEA;ISO]
[GO:0060252 "positive regulation of glial cell proliferation"
evidence=IMP] [GO:0060291 "long-term synaptic potentiation"
evidence=IEA;ISO] [GO:0097449 "astrocyte projection" evidence=ISO]
InterPro:IPR001664 RGD:2679 GO:GO:0005737 GO:GO:0009611 GO:GO:0005200
GO:GO:0060291 GO:GO:0030198 GO:GO:0005882 GO:GO:0042995 GO:GO:0005178
GO:GO:0031102 GO:GO:0045109 HOGENOM:HOG000230977 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038
PROSITE:PS00226 GO:GO:0044297 GO:GO:0014002 GO:GO:0010977
GeneTree:ENSGT00660000095344 GO:GO:0060252 CTD:2670 eggNOG:NOG259463
KO:K05640 OMA:ASSNMQE OrthoDB:EOG48WC24 GO:GO:0060020 GO:GO:0010625
GO:GO:0051580 EMBL:U03700 EMBL:AF028784 EMBL:BC088851 EMBL:Z48978
EMBL:AY142198 IPI:IPI00190943 IPI:IPI00210211 PIR:I56572
RefSeq:NP_058705.2 UniGene:Rn.91512 ProteinModelPortal:P47819
SMR:P47819 IntAct:P47819 STRING:P47819 PhosphoSite:P47819
World-2DPAGE:0004:P47819 PRIDE:P47819 Ensembl:ENSRNOT00000034401
GeneID:24387 KEGG:rno:24387 UCSC:RGD:2679 InParanoid:P47819
NextBio:603163 ArrayExpress:P47819 Genevestigator:P47819
GermOnline:ENSRNOG00000002919 Uniprot:P47819
Length = 430
Score = 140 (54.3 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 29/83 (34%), Positives = 51/83 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRELME 262
++ LR N L + +E E++ E + + AR+E E + L+ EM L++Y++L+
Sbjct: 293 DLESLRGTNESLERQMREQEERHARESASYQEALARLEEEGQSLKEEMARHLQEYQDLLN 352
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EE+ +
Sbjct: 353 VKLALDIEIATYRKLLEGEENRI 375
Score = 37 (18.1 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 90 LYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIE 126
+Y + ++E +L L RKV+ ++ +F R + E
Sbjct: 169 VYRQEADEATLARVDLERKVES-LEEEIQFLRKIHEE 204
>UNIPROTKB|F1LSI8 [details] [associations]
symbol:Gfap "Glial fibrillary acidic protein" species:10116
"Rattus norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005882
"intermediate filament" evidence=IEA] [GO:0010625 "positive
regulation of Schwann cell proliferation" evidence=IEA] [GO:0010977
"negative regulation of neuron projection development"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030198 "extracellular
matrix organization" evidence=IEA] [GO:0031102 "neuron projection
regeneration" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0044297 "cell body" evidence=IEA] [GO:0045109
"intermediate filament organization" evidence=IEA] [GO:0051580
"regulation of neurotransmitter uptake" evidence=IEA] [GO:0060020
"Bergmann glial cell differentiation" evidence=IEA] [GO:0060291
"long-term synaptic potentiation" evidence=IEA] InterPro:IPR001664
RGD:2679 GO:GO:0005737 GO:GO:0005198 GO:GO:0060291 GO:GO:0030198
GO:GO:0005882 GO:GO:0042995 GO:GO:0031102 GO:GO:0045109
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0044297 GO:GO:0014002
GO:GO:0010977 GO:GO:0060020 GO:GO:0010625 GO:GO:0051580
IPI:IPI00952351 Ensembl:ENSRNOT00000065277 ArrayExpress:F1LSI8
Uniprot:F1LSI8
Length = 431
Score = 140 (54.3 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 29/83 (34%), Positives = 51/83 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRELME 262
++ LR N L + +E E++ E + + AR+E E + L+ EM L++Y++L+
Sbjct: 293 DLESLRGTNESLERQMREQEERHARESASYQEALARLEEEGQSLKEEMARHLQEYQDLLN 352
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EE+ +
Sbjct: 353 VKLALDIEIATYRKLLEGEENRI 375
Score = 37 (18.1 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 90 LYNKGSEEQSLGNWQLVRKVQGEVKTSFKFHRTLKIE 126
+Y + ++E +L L RKV+ ++ +F R + E
Sbjct: 169 VYRQEADEATLARVDLERKVES-LEEEIQFLRKIHEE 204
>UNIPROTKB|F1PRF3 [details] [associations]
symbol:KRT5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045095 "keratin filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095 PANTHER:PTHR23239:SF18
GeneTree:ENSGT00610000085801 EMBL:AAEX03015007
Ensembl:ENSCAFT00000011670 Uniprot:F1PRF3
Length = 113
Score = 119 (46.9 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+T+ ++ E + + K A +EA +++ + +M +K+Y+E+M K+ LD+EIA YR L
Sbjct: 47 VTQAEQQGEAALTDARCKLAELEAALQKAKQDMACLVKEYQEVMNSKLGLDIEIATYRRL 106
Query: 278 MEAEE 282
+E EE
Sbjct: 107 LEGEE 111
>UNIPROTKB|I3LFL9 [details] [associations]
symbol:I3LFL9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045095 "keratin filament" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR001664
InterPro:IPR003054 GO:GO:0005198 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045095 PANTHER:PTHR23239:SF18 GeneTree:ENSGT00670000098177
EMBL:FP102426 Ensembl:ENSSSCT00000025644 OMA:TANACSP Uniprot:I3LFL9
Length = 158
Score = 119 (46.9 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 209 NELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLD 268
++L AA + E ++ E + + K A +EA +++ + +M +K+Y+E++ K+ LD
Sbjct: 16 SKLEAA---VAEAEQQGEVALNDAKCKLAELEAALQKAKQDMACLIKEYQEVLNSKLGLD 72
Query: 269 VEIAQYRNLMEAEESSL 285
+EIA YR L+E EE L
Sbjct: 73 IEIATYRRLLEGEEQRL 89
>UNIPROTKB|F1MSQ6 [details] [associations]
symbol:NEFH "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060052 "neurofilament cytoskeleton organization"
evidence=IEA] [GO:0045110 "intermediate filament bundle assembly"
evidence=IEA] [GO:0005883 "neurofilament" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000786
"nucleosome" evidence=IEA] InterPro:IPR005819 PRINTS:PR00624
GO:GO:0005739 GO:GO:0000226 GO:GO:0003677
GeneTree:ENSGT00690000102043 GO:GO:0005883 GO:GO:0060052
InterPro:IPR016044 InterPro:IPR018039 Pfam:PF00038 PROSITE:PS00226
GO:GO:0006334 GO:GO:0000786 GO:GO:0045110 InterPro:IPR010790
Pfam:PF07142 EMBL:DAAA02045602 IPI:IPI00733059
Ensembl:ENSBTAT00000029508 OMA:EGTANND Uniprot:F1MSQ6
Length = 1082
Score = 145 (56.1 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 29/81 (35%), Positives = 51/81 (62%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
TE+ L++ L + ELED+ + + Q +++AE++ + EM QL++Y++L+
Sbjct: 324 TELETLKSTKDSLERQRSELEDRHQADIASYQEAIQQLDAELRNTKWEMAAQLREYQDLL 383
Query: 262 EIKINLDVEIAQYRNLMEAEE 282
+K+ LD+EIA YR L+E EE
Sbjct: 384 NVKMALDIEIAAYRKLLEGEE 404
>UNIPROTKB|Q28115 [details] [associations]
symbol:GFAP "Glial fibrillary acidic protein" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0060291
"long-term synaptic potentiation" evidence=IEA] [GO:0060020
"Bergmann glial cell differentiation" evidence=IEA] [GO:0051580
"regulation of neurotransmitter uptake" evidence=IEA] [GO:0045109
"intermediate filament organization" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0031102 "neuron projection regeneration"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0014002
"astrocyte development" evidence=IEA] [GO:0010977 "negative
regulation of neuron projection development" evidence=IEA]
[GO:0010625 "positive regulation of Schwann cell proliferation"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 InterPro:IPR006821 Pfam:PF04732 GO:GO:0005737
GO:GO:0005198 GO:GO:0060291 GO:GO:0030198 GO:GO:0005882
GO:GO:0042995 GO:GO:0031102 GO:GO:0045109 HOGENOM:HOG000230977
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0044297
GO:GO:0014002 GO:GO:0010977 GeneTree:ENSGT00660000095344
EMBL:Y08255 EMBL:BC119892 EMBL:AY174179 EMBL:L19867 IPI:IPI00716718
PIR:PC2280 RefSeq:NP_776490.2 UniGene:Bt.21127
ProteinModelPortal:Q28115 SMR:Q28115 IntAct:Q28115 STRING:Q28115
PRIDE:Q28115 Ensembl:ENSBTAT00000017997 GeneID:281189
KEGG:bta:281189 CTD:2670 eggNOG:NOG259463 InParanoid:Q28115
KO:K05640 OMA:ASSNMQE OrthoDB:EOG48WC24 NextBio:20805246
ArrayExpress:Q28115 GO:GO:0060020 GO:GO:0010625 GO:GO:0051580
Uniprot:Q28115
Length = 428
Score = 140 (54.3 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
++ LR N L + +E E++ E Q AR+E E + L+ EM L++Y++L+
Sbjct: 291 DLESLRGTNESLERQMREQEERHAREAASYQEALARLEEEGQSLKDEMARHLQEYQDLLN 350
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EE+ +
Sbjct: 351 VKLALDIEIATYRKLLEGEENRI 373
>MGI|MGI:95697 [details] [associations]
symbol:Gfap "glial fibrillary acidic protein" species:10090
"Mus musculus" [GO:0005178 "integrin binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IMP]
[GO:0005200 "structural constituent of cytoskeleton" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005882 "intermediate filament" evidence=IDA]
[GO:0009611 "response to wounding" evidence=ISO] [GO:0010625
"positive regulation of Schwann cell proliferation" evidence=IMP]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IGI;IMP] [GO:0014002 "astrocyte development" evidence=IGI]
[GO:0016020 "membrane" evidence=IDA] [GO:0019900 "kinase binding"
evidence=ISO] [GO:0030198 "extracellular matrix organization"
evidence=IMP] [GO:0031102 "neuron projection regeneration"
evidence=IMP] [GO:0042995 "cell projection" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] [GO:0044464 "cell part"
evidence=IDA] [GO:0045103 "intermediate filament-based process"
evidence=IMP] [GO:0045109 "intermediate filament organization"
evidence=IGI;IMP] [GO:0051580 "regulation of neurotransmitter
uptake" evidence=IMP] [GO:0060020 "Bergmann glial cell
differentiation" evidence=IMP] [GO:0060252 "positive regulation of
glial cell proliferation" evidence=ISO] [GO:0060291 "long-term
synaptic potentiation" evidence=IMP] [GO:0097449 "astrocyte
projection" evidence=IDA] InterPro:IPR001664 InterPro:IPR006821
Pfam:PF04732 MGI:MGI:95697 GO:GO:0005737 GO:GO:0009611
GO:GO:0016020 GO:GO:0005198 GO:GO:0005200 GO:GO:0060291
GO:GO:0030198 GO:GO:0005882 GO:GO:0042995 GO:GO:0031102
GO:GO:0045109 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0044297 EMBL:AL731670 GO:GO:0014002 GO:GO:0010977
GeneTree:ENSGT00660000095344 CTD:2670 eggNOG:NOG259463 KO:K05640
OMA:ASSNMQE OrthoDB:EOG48WC24 GO:GO:0060020 GO:GO:0010625
GO:GO:0051580 EMBL:X02801 EMBL:AK140151 EMBL:AY279974 EMBL:X78141
EMBL:BC100728 EMBL:BC100737 EMBL:BC101968 EMBL:BC103571
EMBL:BC139357 EMBL:BC139358 EMBL:K01347 EMBL:M25937 EMBL:AF332061
EMBL:AF332062 EMBL:EF101554 EMBL:DQ887822 EMBL:AY142200
IPI:IPI00117042 IPI:IPI00649033 PIR:B60052 RefSeq:NP_001124492.1
RefSeq:NP_034407.2 UniGene:Mm.1239 ProteinModelPortal:P03995
SMR:P03995 DIP:DIP-1084N IntAct:P03995 STRING:P03995
PhosphoSite:P03995 UCD-2DPAGE:P03995 PaxDb:P03995 PRIDE:P03995
Ensembl:ENSMUST00000067444 Ensembl:ENSMUST00000077902 GeneID:14580
KEGG:mmu:14580 UCSC:uc007lsw.2 UCSC:uc007lsx.2 InParanoid:B2RTI7
NextBio:286306 Bgee:P03995 CleanEx:MM_GFAP Genevestigator:P03995
GermOnline:ENSMUSG00000020932 Uniprot:P03995
Length = 430
Score = 140 (54.3 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 29/83 (34%), Positives = 51/83 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYEQSKF----ARMEAEIKRLQTEMTEQLKDYRELME 262
++ LR N L + +E E++ E + + AR+E E + L+ EM L++Y++L+
Sbjct: 292 DLESLRGTNESLERQMREQEERHARESASYQEALARLEEEGQSLKEEMARHLQEYQDLLN 351
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EE+ +
Sbjct: 352 VKLALDIEIATYRKLLEGEENRI 374
>UNIPROTKB|P04260 [details] [associations]
symbol:P04260 "Keratin, type II cytoskeletal 59 kDa,
component IV" species:9913 "Bos taurus" [GO:0005882 "intermediate
filament" evidence=IEA] GO:GO:0005882 InterPro:IPR016044
InterPro:IPR018039 Pfam:PF00038 PROSITE:PS00226
HOGENOM:HOG000230976 eggNOG:NOG146769 OrthoDB:EOG4P8FJ6 EMBL:K03536
EMBL:Z48499 IPI:IPI00840655 PIR:A02946 UniGene:Bt.91778
UniGene:Bt.99723 ProteinModelPortal:P04260 STRING:P04260
PRIDE:P04260 InParanoid:P04260 ArrayExpress:P04260 Uniprot:P04260
Length = 182
Score = 127 (49.8 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+SK A +E +++ + +M LK+Y+ELM +K+ LDVEIA YR L+E EE L
Sbjct: 35 RSKLADLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYRKLLEGEECRL 87
>UNIPROTKB|F1NNY7 [details] [associations]
symbol:NEFL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0005883 "neurofilament" evidence=IEA] [GO:0014012 "peripheral
nervous system axon regeneration" evidence=IEA] [GO:0031133
"regulation of axon diameter" evidence=IEA] [GO:0040011
"locomotion" evidence=IEA] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=IEA] [GO:0045110 "intermediate
filament bundle assembly" evidence=IEA] [GO:0050772 "positive
regulation of axonogenesis" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0060052 "neurofilament cytoskeleton organization" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248 GO:GO:0000226
GO:GO:0005198 GO:GO:0040011 GO:GO:0043524
GeneTree:ENSGT00690000102043 GO:GO:0005883 GO:GO:0060052
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045110 EMBL:AADN02055473
IPI:IPI00820607 Ensembl:ENSGALT00000041011 ArrayExpress:F1NNY7
Uniprot:F1NNY7
Length = 348
Score = 138 (53.6 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 30/83 (36%), Positives = 51/83 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQ----IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ R N L ++ +ELE++ I Q ++E E++ ++EM LK+Y++L+
Sbjct: 257 EIEATRGMNEALEKQLQELEEKQSADISALQDTINKLENELRTTKSEMARYLKEYQDLLN 316
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EE+ L
Sbjct: 317 VKMALDIEIAAYRKLLEGEETRL 339
>UNIPROTKB|A0JND2 [details] [associations]
symbol:KRT80 "Keratin, type II cytoskeletal 80"
species:9913 "Bos taurus" [GO:0045095 "keratin filament"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
GO:GO:0005198 HOVERGEN:HBG013015 InterPro:IPR016044
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095
HOGENOM:HOG000230976 PANTHER:PTHR23239:SF18 KO:K07605 EMBL:BC126624
EMBL:BC147909 IPI:IPI00827141 RefSeq:NP_001071420.1
UniGene:Bt.54510 ProteinModelPortal:A0JND2 PRIDE:A0JND2
Ensembl:ENSBTAT00000007288 GeneID:522400 KEGG:bta:522400 CTD:144501
eggNOG:NOG147372 GeneTree:ENSGT00690000102295 InParanoid:A0JND2
OMA:NQEKEEM OrthoDB:EOG49GKGM NextBio:20873519 Uniprot:A0JND2
Length = 422
Score = 139 (54.0 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 32/90 (35%), Positives = 55/90 (61%)
Query: 200 RSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLK 255
R K +++ +++ +L E K E+Q E ++K A++E +++ + +M QL+
Sbjct: 305 RIQKLRSQILSIKSHCLKLEENIKVAEEQGELAFQDAKAKLAQLEDALQQAKKDMARQLR 364
Query: 256 DYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+Y+ELM K+ LD+EIA YR LME EES +
Sbjct: 365 EYQELMNTKLALDIEIATYRKLMEGEESRM 394
>UNIPROTKB|E9PAX3 [details] [associations]
symbol:GFAP "Glial fibrillary acidic protein" species:9606
"Homo sapiens" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 GO:GO:0005198 GO:GO:0005882 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
EMBL:AC015936 CTD:2670 KO:K05640 RefSeq:NP_001124491.1
UniGene:Hs.514227 DNASU:2670 GeneID:2670 KEGG:hsa:2670
HGNC:HGNC:4235 ChiTaRS:GFAP GenomeRNAi:2670 NextBio:10538
IPI:IPI01009054 ProteinModelPortal:E9PAX3 SMR:E9PAX3 IntAct:E9PAX3
PRIDE:E9PAX3 Ensembl:ENST00000435360 UCSC:uc002ihr.3
ArrayExpress:E9PAX3 Bgee:E9PAX3 Uniprot:E9PAX3
Length = 431
Score = 139 (54.0 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
++ LR N L + +E E++ E Q AR+E E + L+ EM L++Y++L+
Sbjct: 295 DLESLRGTNESLERQMREQEERHVREAASYQEALARLEEEGQSLKDEMARHLQEYQDLLN 354
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EE+ +
Sbjct: 355 VKLALDIEIATYRKLLEGEENRI 377
>UNIPROTKB|P14136 [details] [associations]
symbol:GFAP "Glial fibrillary acidic protein" species:9606
"Homo sapiens" [GO:0005178 "integrin binding" evidence=IEA]
[GO:0005200 "structural constituent of cytoskeleton" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0009611
"response to wounding" evidence=IEA] [GO:0010625 "positive
regulation of Schwann cell proliferation" evidence=IEA] [GO:0010977
"negative regulation of neuron projection development"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0019900 "kinase binding"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0031102 "neuron projection regeneration"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0044297 "cell body" evidence=IEA] [GO:0045109 "intermediate
filament organization" evidence=IEA] [GO:0051580 "regulation of
neurotransmitter uptake" evidence=IEA] [GO:0060020 "Bergmann glial
cell differentiation" evidence=IEA] [GO:0060291 "long-term synaptic
potentiation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] InterPro:IPR001664
GO:GO:0005829 Reactome:REACT_111102 GO:GO:0009611 GO:GO:0005200
GO:GO:0060291 GO:GO:0030198 GO:GO:0005882 EMBL:CH471178
GO:GO:0042995 GO:GO:0031102 GO:GO:0045109 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0044297 GO:GO:0014002
GO:GO:0010977 CTD:2670 eggNOG:NOG259463 KO:K05640 OMA:ASSNMQE
OrthoDB:EOG48WC24 GO:GO:0060020 GO:GO:0010625 GO:GO:0051580
EMBL:J04569 EMBL:S40719 EMBL:AF419299 EMBL:AK128790 EMBL:AK222683
EMBL:AK315398 EMBL:AL133013 EMBL:BC013596 EMBL:BC041765
EMBL:BC062609 EMBL:M26638 EMBL:AJ306447 EMBL:AY142187 EMBL:AY142188
EMBL:AY142191 IPI:IPI00025363 IPI:IPI00383815 IPI:IPI00443478
PIR:A32936 PIR:T42645 RefSeq:NP_001124491.1 RefSeq:NP_001229305.1
RefSeq:NP_002046.1 UniGene:Hs.514227 ProteinModelPortal:P14136
SMR:P14136 IntAct:P14136 MINT:MINT-1450103 STRING:P14136
PhosphoSite:P14136 DMDM:121135 REPRODUCTION-2DPAGE:P14136
UCD-2DPAGE:P14136 PaxDb:P14136 PeptideAtlas:P14136 PRIDE:P14136
DNASU:2670 Ensembl:ENST00000253408 GeneID:2670 KEGG:hsa:2670
UCSC:uc002ihq.3 UCSC:uc021tyh.1 GeneCards:GC17M042982
HGNC:HGNC:4235 HPA:CAB000039 MIM:137780 MIM:203450
neXtProt:NX_P14136 Orphanet:58 PharmGKB:PA28647 InParanoid:P14136
PhylomeDB:P14136 ChiTaRS:GFAP GenomeRNAi:2670 NextBio:10538
PMAP-CutDB:P14136 ArrayExpress:P14136 Bgee:P14136
Genevestigator:P14136 GermOnline:ENSG00000131095 Uniprot:P14136
Length = 432
Score = 139 (54.0 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
++ LR N L + +E E++ E Q AR+E E + L+ EM L++Y++L+
Sbjct: 295 DLESLRGTNESLERQMREQEERHVREAASYQEALARLEEEGQSLKDEMARHLQEYQDLLN 354
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EE+ +
Sbjct: 355 VKLALDIEIATYRKLLEGEENRI 377
>UNIPROTKB|Q29S21 [details] [associations]
symbol:KRT7 "Keratin, type II cytoskeletal 7" species:9913
"Bos taurus" [GO:0006417 "regulation of translation" evidence=ISS]
[GO:0051325 "interphase" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0045095
"keratin filament" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] InterPro:IPR001664 InterPro:IPR003054
PRINTS:PR01276 GO:GO:0005634 GO:GO:0005794 GO:GO:0006417
GO:GO:0005198 GO:GO:0006260 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045095 HOGENOM:HOG000230976 PANTHER:PTHR23239:SF18 KO:K07605
EMBL:BC113214 IPI:IPI00694214 RefSeq:NP_001039876.1
UniGene:Bt.29236 ProteinModelPortal:Q29S21 SMR:Q29S21 PRIDE:Q29S21
Ensembl:ENSBTAT00000021516 GeneID:535697 KEGG:bta:535697 CTD:3855
eggNOG:NOG145985 GeneTree:ENSGT00670000097847 InParanoid:Q29S21
OMA:RIFEAQI OrthoDB:EOG4TMR28 NextBio:20876814 GO:GO:0051325
Uniprot:Q29S21
Length = 466
Score = 139 (54.0 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 28/81 (34%), Positives = 50/81 (61%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIK 264
D+ N+ + + + E ++ ++K +EA +++ + +MT QL++Y+ELM +K
Sbjct: 324 DSVKNQRSKLEAAIADAEQRGELAVKDARAKQEDLEAALQKAKQDMTRQLREYQELMNVK 383
Query: 265 INLDVEIAQYRNLMEAEESSL 285
+ LD+EIA YR L+E EES L
Sbjct: 384 LALDIEIATYRKLLEGEESRL 404
>UNIPROTKB|F1RR02 [details] [associations]
symbol:GFAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060291 "long-term synaptic potentiation" evidence=IEA]
[GO:0060020 "Bergmann glial cell differentiation" evidence=IEA]
[GO:0051580 "regulation of neurotransmitter uptake" evidence=IEA]
[GO:0045109 "intermediate filament organization" evidence=IEA]
[GO:0044297 "cell body" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0031102 "neuron projection regeneration"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0014002
"astrocyte development" evidence=IEA] [GO:0010977 "negative
regulation of neuron projection development" evidence=IEA]
[GO:0010625 "positive regulation of Schwann cell proliferation"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] InterPro:IPR001664
InterPro:IPR006821 Pfam:PF04732 GO:GO:0005737 GO:GO:0005198
GO:GO:0060291 GO:GO:0030198 GO:GO:0005882 GO:GO:0042995
GO:GO:0031102 GO:GO:0045109 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0044297
GO:GO:0014002 GO:GO:0010977 GeneTree:ENSGT00660000095344 CTD:2670
KO:K05640 OMA:ASSNMQE GO:GO:0060020 GO:GO:0010625 GO:GO:0051580
EMBL:CU896578 RefSeq:NP_001231326.1 UniGene:Ssc.5137
Ensembl:ENSSSCT00000018879 GeneID:396562 KEGG:ssc:396562
Uniprot:F1RR02
Length = 428
Score = 138 (53.6 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 30/83 (36%), Positives = 49/83 (59%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
++ LR N L + +E E++ E Q R+E E + L+ EM L++Y+EL+
Sbjct: 291 DVESLRGTNESLERQMREQEERHAREAASYQEALTRLEEEGQSLKDEMARHLQEYQELLN 350
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EE+ +
Sbjct: 351 VKLALDIEIATYRKLLEGEENRI 373
>MGI|MGI:97309 [details] [associations]
symbol:Nefh "neurofilament, heavy polypeptide" species:10090
"Mus musculus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005882
"intermediate filament" evidence=IEA] [GO:0005883 "neurofilament"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] [GO:0045104
"intermediate filament cytoskeleton organization" evidence=IMP]
[GO:0045110 "intermediate filament bundle assembly" evidence=IGI]
[GO:0045735 "nutrient reservoir activity" evidence=IEA] [GO:0048936
"peripheral nervous system neuron axonogenesis" evidence=IMP]
[GO:0060052 "neurofilament cytoskeleton organization"
evidence=IGI;IMP] InterPro:IPR001419 Pfam:PF03157 MGI:MGI:97309
GO:GO:0045735 GO:GO:0005739 GO:GO:0000226 eggNOG:NOG12793
GeneTree:ENSGT00690000102043 HOGENOM:HOG000230977
HOVERGEN:HBG013015 GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044
InterPro:IPR018039 Pfam:PF00038 PROSITE:PS00226 EMBL:AL645522
GO:GO:0045110 CTD:4744 KO:K04574 OrthoDB:EOG4NS3BW
InterPro:IPR010790 Pfam:PF07142 EMBL:M35131 EMBL:M24496 EMBL:M23349
EMBL:M24494 EMBL:M24495 EMBL:Z31012 EMBL:EF101556 IPI:IPI00114241
PIR:JT0368 RefSeq:NP_035034.2 UniGene:Mm.298283 DisProt:DP00050
ProteinModelPortal:P19246 SMR:P19246 IntAct:P19246 STRING:P19246
PhosphoSite:P19246 UCD-2DPAGE:P19246 PaxDb:P19246 PRIDE:P19246
DNASU:380684 Ensembl:ENSMUST00000093369 GeneID:380684
KEGG:mmu:380684 UCSC:uc007hvm.1 InParanoid:P19246 OMA:EAKSPGE
NextBio:401100 Bgee:P19246 CleanEx:MM_NEFH Genevestigator:P19246
GermOnline:ENSMUSG00000020396 Uniprot:P19246
Length = 1090
Score = 143 (55.4 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 28/81 (34%), Positives = 51/81 (62%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
TE+ L++ L + ELED+ + + Q ++++E++ + EM QL++Y++L+
Sbjct: 328 TELEALKSTKESLERQRSELEDRHQADIASYQDAIQQLDSELRNTKWEMAAQLREYQDLL 387
Query: 262 EIKINLDVEIAQYRNLMEAEE 282
+K+ LD+EIA YR L+E EE
Sbjct: 388 NVKMALDIEIAAYRKLLEGEE 408
>ZFIN|ZDB-GENE-030131-7320 [details] [associations]
symbol:si:dkey-33c12.3 "si:dkey-33c12.3"
species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005882 "intermediate filament"
evidence=IEA] InterPro:IPR001664 ZFIN:ZDB-GENE-030131-7320
GO:GO:0005198 GO:GO:0005882 HOGENOM:HOG000230977 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 EMBL:BC097231 IPI:IPI00482911
UniGene:Dr.132794 InParanoid:Q4V8S0 Uniprot:Q4V8S0
Length = 435
Score = 138 (53.6 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 32/92 (34%), Positives = 52/92 (56%)
Query: 200 RSGKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRE 259
RS + + N + + N +L E + ++ Q K +E +I + EM+ L++Y++
Sbjct: 341 RSAEVEALRNVINSLNIQLGELEEMQNSEVTKYQGKIGDLERDIGDAKEEMSRYLREYQD 400
Query: 260 LMEIKINLDVEIAQYRNLMEAEE-----SSLP 286
L+ +K+ LDVEIA YR L+E EE SSLP
Sbjct: 401 LLNVKMALDVEIAAYRKLLEGEEIRFTYSSLP 432
>UNIPROTKB|Q6KB66 [details] [associations]
symbol:KRT80 "Keratin, type II cytoskeletal 80"
species:9606 "Homo sapiens" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0045095 "keratin filament"
evidence=IEA] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
GO:GO:0005198 EMBL:CH471111 HOVERGEN:HBG013015 InterPro:IPR016044
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095
HSSP:P08670 HOGENOM:HOG000230976 PANTHER:PTHR23239:SF18 KO:K07605
CTD:144501 eggNOG:NOG147372 OMA:NQEKEEM EMBL:AJ717743 EMBL:BX537567
EMBL:BC065180 IPI:IPI00375843 IPI:IPI00431749 IPI:IPI00853265
RefSeq:NP_001074961.1 RefSeq:NP_872313.2 UniGene:Hs.140978
ProteinModelPortal:Q6KB66 SMR:Q6KB66 IntAct:Q6KB66
PhosphoSite:Q6KB66 DMDM:166218808 PaxDb:Q6KB66 PRIDE:Q6KB66
DNASU:144501 Ensembl:ENST00000313234 Ensembl:ENST00000394815
GeneID:144501 KEGG:hsa:144501 UCSC:uc001rzw.3 UCSC:uc001rzx.3
UCSC:uc001rzy.3 GeneCards:GC12M052562 HGNC:HGNC:27056 HPA:HPA040782
MIM:611161 neXtProt:NX_Q6KB66 PharmGKB:PA147357831
GenomeRNAi:144501 NextBio:84945 Bgee:Q6KB66 CleanEx:HS_KRT80
Genevestigator:Q6KB66 Uniprot:Q6KB66
Length = 452
Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 31/90 (34%), Positives = 55/90 (61%)
Query: 200 RSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLK 255
R K +++ +++ +L E K E+Q E ++K A++EA +++ + +M QL+
Sbjct: 305 RIQKLRSQILSVKSHCLKLEENIKTAEEQGELAFQDAKTKLAQLEAALQQAKQDMARQLR 364
Query: 256 DYRELMEIKINLDVEIAQYRNLMEAEESSL 285
Y+ELM +K+ LD+EIA YR L+E EE +
Sbjct: 365 KYQELMNVKLALDIEIATYRKLVEGEEGRM 394
>UNIPROTKB|F1PRB0 [details] [associations]
symbol:KRT7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045095 "keratin filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 InterPro:IPR009053 SUPFAM:SSF46579
GO:GO:0045095 PANTHER:PTHR23239:SF18 OMA:RIFEAQI
GeneTree:ENSGT00670000097789 EMBL:AAEX03015007 EMBL:AAEX03015008
EMBL:AAEX03015009 Ensembl:ENSCAFT00000011720 Uniprot:F1PRB0
Length = 461
Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 32/79 (40%), Positives = 49/79 (62%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKIN 266
+ +L AA ER EL ++ +K +EA ++R + +M QL++Y+ELM +K+
Sbjct: 324 QRTKLEAAIAEAEERG-ELA--LKDAHAKQEELEAALQRAKQDMARQLREYQELMNVKLA 380
Query: 267 LDVEIAQYRNLMEAEESSL 285
LD+EIA YR L+E EES L
Sbjct: 381 LDIEIATYRKLLEGEESRL 399
>UNIPROTKB|A5A6N0 [details] [associations]
symbol:KRT7 "Keratin, type II cytoskeletal 7" species:9598
"Pan troglodytes" [GO:0006417 "regulation of translation"
evidence=ISS] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
GO:GO:0006417 GO:GO:0005198 GO:GO:0006260 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 InterPro:IPR009053 SUPFAM:SSF46579
GO:GO:0045095 HOGENOM:HOG000230976 PANTHER:PTHR23239:SF18 KO:K07605
CTD:3855 eggNOG:NOG145985 OrthoDB:EOG4TMR28 GO:GO:0051325
EMBL:AB222158 RefSeq:NP_001104284.1 UniGene:Ptr.6275
ProteinModelPortal:A5A6N0 SMR:A5A6N0 STRING:A5A6N0 PRIDE:A5A6N0
GeneID:466983 KEGG:ptr:466983 InParanoid:A5A6N0 NextBio:20844998
Uniprot:A5A6N0
Length = 469
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 210 ELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDV 269
+L AA ER EL ++ ++K +EA ++R + +M QL++Y+ELM +K+ LD+
Sbjct: 331 KLEAAIAEAEERG-ELA--LKDARAKQEELEAALQRAKQDMARQLREYQELMSVKLALDI 387
Query: 270 EIAQYRNLMEAEESSL 285
EIA YR L+E EES L
Sbjct: 388 EIATYRKLLEGEESRL 403
>UNIPROTKB|H9KZP5 [details] [associations]
symbol:LOC395772 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0045095 "keratin filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 InterPro:IPR009053 SUPFAM:SSF46579
GO:GO:0045095 PANTHER:PTHR23239:SF18 GeneTree:ENSGT00670000097847
EMBL:AADN02076548 EMBL:AADN02076549 EMBL:AADN02076550
EMBL:AADN02076551 EMBL:AADN02076552 EMBL:AADN02076553
EMBL:AADN02076554 Ensembl:ENSGALT00000016667 Uniprot:H9KZP5
Length = 492
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 26/68 (38%), Positives = 45/68 (66%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+ E + E ++ ++K +EA +++ + +M QL++Y+ELM +K+ LD+EIA YR L
Sbjct: 358 IAEAEERGELAVKDARAKLEELEAALQKAKQDMARQLREYQELMNVKLALDIEIATYRKL 417
Query: 278 MEAEESSL 285
+E EES L
Sbjct: 418 LEGEESRL 425
>UNIPROTKB|O93532 [details] [associations]
symbol:O93532 "Keratin, type II cytoskeletal cochleal"
species:9031 "Gallus gallus" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0045095 "keratin filament"
evidence=IEA] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
GO:GO:0005198 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
InterPro:IPR009053 SUPFAM:SSF46579 GO:GO:0045095
HOGENOM:HOG000230976 PANTHER:PTHR23239:SF18 eggNOG:NOG146769
KO:K07605 EMBL:AF072698 IPI:IPI00584075 PIR:A60093
RefSeq:NP_990263.1 UniGene:Gga.9481 ProteinModelPortal:O93532
SMR:O93532 PRIDE:O93532 GeneID:395772 KEGG:gga:395772
NextBio:20815840 Uniprot:O93532
Length = 492
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 26/68 (38%), Positives = 45/68 (66%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+ E + E ++ ++K +EA +++ + +M QL++Y+ELM +K+ LD+EIA YR L
Sbjct: 358 IAEAEERGELAVKDARAKLEELEAALQKAKQDMARQLREYQELMNVKLALDIEIATYRKL 417
Query: 278 MEAEESSL 285
+E EES L
Sbjct: 418 LEGEESRL 425
>UNIPROTKB|Q6PVZ5 [details] [associations]
symbol:KRT5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0045095 "keratin filament" evidence=IEA] InterPro:IPR001664
InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095 HOGENOM:HOG000230976
PANTHER:PTHR23239:SF18 eggNOG:NOG146769 KO:K07605
GeneTree:ENSGT00610000085801 OrthoDB:EOG4P8FJ6 CTD:3852
EMBL:AADN02076542 EMBL:AY574983 IPI:IPI00581314
RefSeq:NP_001001195.1 UniGene:Gga.6561 ProteinModelPortal:Q6PVZ5
STRING:Q6PVZ5 PRIDE:Q6PVZ5 Ensembl:ENSGALT00000016650 GeneID:407779
KEGG:gga:407779 InParanoid:Q6PVZ5 OMA:FNASSAR NextBio:20818601
Uniprot:Q6PVZ5
Length = 599
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 29/83 (34%), Positives = 52/83 (62%)
Query: 205 DTEMNELRAANYR--LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELME 262
+ E + + AN + + E + E ++ +SK A +E +++ + ++ QL++Y+ELM
Sbjct: 405 EIESVKKQCANLQAAIAEAEERGEMALKDAKSKLAELEDALQKAKADLARQLREYQELMN 464
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EES L
Sbjct: 465 VKLALDIEIATYRKLLEGEESRL 487
>UNIPROTKB|H9KZP6 [details] [associations]
symbol:LOC395772 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0045095 "keratin filament" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0051325
"interphase" evidence=IEA] InterPro:IPR001664 InterPro:IPR003054
PRINTS:PR01276 GO:GO:0005198 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0045095 PANTHER:PTHR23239:SF18
GeneTree:ENSGT00670000097847 EMBL:AADN02076548 EMBL:AADN02076549
EMBL:AADN02076550 EMBL:AADN02076551 EMBL:AADN02076552
EMBL:AADN02076553 EMBL:AADN02076554 Ensembl:ENSGALT00000016670
OMA:RSNIVPM Uniprot:H9KZP6
Length = 540
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 26/68 (38%), Positives = 45/68 (66%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+ E + E ++ ++K +EA +++ + +M QL++Y+ELM +K+ LD+EIA YR L
Sbjct: 368 IAEAEERGELAVKDARAKLEELEAALQKAKQDMARQLREYQELMNVKLALDIEIATYRKL 427
Query: 278 MEAEESSL 285
+E EES L
Sbjct: 428 LEGEESRL 435
>UNIPROTKB|E1C5R3 [details] [associations]
symbol:NEFL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0005883 "neurofilament" evidence=IEA] [GO:0014012 "peripheral
nervous system axon regeneration" evidence=IEA] [GO:0031133
"regulation of axon diameter" evidence=IEA] [GO:0040011
"locomotion" evidence=IEA] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=IEA] [GO:0045110 "intermediate
filament bundle assembly" evidence=IEA] [GO:0050772 "positive
regulation of axonogenesis" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0060052 "neurofilament cytoskeleton organization" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 InterPro:IPR006821
Pfam:PF04732 PRINTS:PR01248 GO:GO:0000226 GO:GO:0005198
GO:GO:0040011 GO:GO:0043524 GeneTree:ENSGT00690000102043
GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0045110
CTD:4747 KO:K04572 OMA:PRVHISS EMBL:AADN02055473 IPI:IPI00575532
RefSeq:XP_417679.1 UniGene:Gga.35414 IntAct:E1C5R3
Ensembl:ENSGALT00000000420 GeneID:419528 KEGG:gga:419528
NextBio:20822571 ArrayExpress:E1C5R3 Uniprot:E1C5R3
Length = 556
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 30/83 (36%), Positives = 51/83 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQ----IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ R N L ++ +ELE++ I Q ++E E++ ++EM LK+Y++L+
Sbjct: 320 EIEATRGMNEALEKQLQELEEKQSADISALQDTINKLENELRTTKSEMARYLKEYQDLLN 379
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EE+ L
Sbjct: 380 VKMALDIEIAAYRKLLEGEETRL 402
>UNIPROTKB|Q02916 [details] [associations]
symbol:NEFL "Neurofilament light polypeptide" species:93934
"Coturnix japonica" [GO:0005200 "structural constituent of
cytoskeleton" evidence=ISS] [GO:0005883 "neurofilament"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0008089 "anterograde axon cargo transport"
evidence=ISS] [GO:0008090 "retrograde axon cargo transport"
evidence=ISS] [GO:0019896 "axon transport of mitochondrion"
evidence=ISS] [GO:0030424 "axon" evidence=ISS] [GO:0033693
"neurofilament bundle assembly" evidence=ISS] [GO:0042802
"identical protein binding" evidence=ISS] [GO:0045109 "intermediate
filament organization" evidence=ISS] [GO:0033596 "TSC1-TSC2
complex" evidence=ISS] InterPro:IPR001664 InterPro:IPR002957
InterPro:IPR006821 Pfam:PF04732 PRINTS:PR01248 GO:GO:0005200
GO:GO:0042802 GO:GO:0008089 GO:GO:0019896 GO:GO:0008090
GO:GO:0008022 HOVERGEN:HBG013015 GO:GO:0005883 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0033693 EMBL:D13223 EMBL:D13222 PIR:A46024
ProteinModelPortal:Q02916 SMR:Q02916 Uniprot:Q02916
Length = 556
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 30/83 (36%), Positives = 51/83 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQ----IEYEQSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ R N L ++ +ELE++ I Q ++E E++ ++EM LK+Y++L+
Sbjct: 320 EIEATRGMNEALEKQLQELEEKQSADISALQDTINKLENELRTTKSEMARYLKEYQDLLN 379
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EE+ L
Sbjct: 380 VKMALDIEIAAYRKLLEGEETRL 402
>UNIPROTKB|H9KZV4 [details] [associations]
symbol:LOC395772 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0045095 "keratin filament" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0051325
"interphase" evidence=IEA] InterPro:IPR001664 InterPro:IPR003054
PRINTS:PR01276 GO:GO:0005198 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0045095 PANTHER:PTHR23239:SF18
GeneTree:ENSGT00670000097847 EMBL:AADN02076548 EMBL:AADN02076549
EMBL:AADN02076550 EMBL:AADN02076551 EMBL:AADN02076552
EMBL:AADN02076553 EMBL:AADN02076554 Ensembl:ENSGALT00000019875
Uniprot:H9KZV4
Length = 352
Score = 135 (52.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 25/66 (37%), Positives = 44/66 (66%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+ E + E ++ ++K +EA +++ + +M QL++Y+ELM +K+ LD+EIA YR L
Sbjct: 286 IAEAEERGELAVKDARAKLEELEAALQKAKQDMARQLREYQELMNVKLALDIEIATYRKL 345
Query: 278 MEAEES 283
+E EES
Sbjct: 346 LEGEES 351
>UNIPROTKB|H0YID6 [details] [associations]
symbol:KRT79 "Keratin, type II cytoskeletal 79"
species:9606 "Homo sapiens" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0045095 "keratin filament"
evidence=IEA] InterPro:IPR001664 InterPro:IPR003054 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095 PANTHER:PTHR23239:SF18
EMBL:AC107016 HGNC:HGNC:28930 PRIDE:H0YID6 Ensembl:ENST00000549255
Bgee:H0YID6 Uniprot:H0YID6
Length = 119
Score = 115 (45.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 21/43 (48%), Positives = 33/43 (76%)
Query: 243 IKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ + + ++T L+DY+ELM +K+ LDVEIA YR L+E+EES +
Sbjct: 1 LHQAKEDLTRLLRDYQELMNVKLALDVEIATYRKLLESEESRM 43
>ZFIN|ZDB-GENE-020424-4 [details] [associations]
symbol:lmnl3 "lamin L3" species:7955 "Danio rerio"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 ZFIN:ZDB-GENE-020424-4 GO:GO:0005198
GO:GO:0005882 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
InterPro:IPR001322 Pfam:PF00932 HSSP:P08670 EMBL:AF397015
IPI:IPI00499884 UniGene:Dr.80387 ProteinModelPortal:Q90XD8
SMR:Q90XD8 STRING:Q90XD8 InParanoid:Q90XD8 ArrayExpress:Q90XD8
Uniprot:Q90XD8
Length = 584
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 41/142 (28%), Positives = 67/142 (47%)
Query: 41 SVAPSKKRKLNILEEYESEER---TSSGFQVT------SSAKGNMEITEVDPDGKFVKLY 91
S++P ++ I+++ + + T SGF SS +G + I EVD DG+++KL
Sbjct: 399 SLSPIQQTLSPIIQQSRKKRKHDATCSGFSPNYRLSQHSSCRGPVSIEEVDLDGRYIKLK 458
Query: 92 NKGSEEQSLGNWQLVRKVQGEVKTS-FKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIV 150
N +Q + WQL RK + E F F + AG +TVW+ ++
Sbjct: 459 NASDRDQVVSGWQL-RKSEAEAPDIVFCFPSPCVMNAGHMLTVWAAAAVDQCGSASDLLL 517
Query: 151 MKNQKFGSGDEISTILLNTDGE 172
+Q +GS ++ LLNT E
Sbjct: 518 STHQSWGSFADVRVSLLNTQNE 539
Score = 131 (51.2 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 25/69 (36%), Positives = 43/69 (62%)
Query: 217 RLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRN 276
R+ E + LE + + Q K + + E+ L+ +M EQL++Y L+++K+ LD+EI YR
Sbjct: 328 RVLELQQTLEHERQVSQQKLSLQQQEMAALRLQMQEQLEEYENLLDVKLMLDMEINAYRK 387
Query: 277 LMEAEESSL 285
++E EE L
Sbjct: 388 MLEGEEKRL 396
>UNIPROTKB|F1LRZ7 [details] [associations]
symbol:Nefh "Neurofilament heavy polypeptide" species:10116
"Rattus norvegicus" [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005883 "neurofilament" evidence=IEA] [GO:0045110
"intermediate filament bundle assembly" evidence=IEA] [GO:0060052
"neurofilament cytoskeleton organization" evidence=IEA] RGD:3159
GO:GO:0005739 GO:GO:0000226 GeneTree:ENSGT00690000102043
GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044 InterPro:IPR018039
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045110 CTD:4744 KO:K04574
InterPro:IPR010790 Pfam:PF07142 OMA:EAKSPGE UniGene:Rn.108194
IPI:IPI01016481 RefSeq:NP_036739.2 Ensembl:ENSRNOT00000011604
GeneID:24587 KEGG:rno:24587 NextBio:603766 ArrayExpress:F1LRZ7
Uniprot:F1LRZ7
Length = 1064
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 27/81 (33%), Positives = 51/81 (62%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKFA----RMEAEIKRLQTEMTEQLKDYRELM 261
TE+ L++ L + ELED+ + + + + +++ E++ + EM QL++Y++L+
Sbjct: 330 TELEALKSTKESLERQRSELEDRHQVDMASYQDAIQQLDNELRNTKWEMAAQLREYQDLL 389
Query: 262 EIKINLDVEIAQYRNLMEAEE 282
+K+ LD+EIA YR L+E EE
Sbjct: 390 NVKMALDIEIAAYRKLLEGEE 410
>RGD|3159 [details] [associations]
symbol:Nefh "neurofilament, heavy polypeptide" species:10116
"Rattus norvegicus" [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0005883
"neurofilament" evidence=ISO] [GO:0030424 "axon" evidence=ISO]
[GO:0045104 "intermediate filament cytoskeleton organization"
evidence=ISO] [GO:0045110 "intermediate filament bundle assembly"
evidence=ISO] [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=ISO] [GO:0060052 "neurofilament cytoskeleton
organization" evidence=ISO] RGD:3159 GO:GO:0005739 GO:GO:0000226
eggNOG:NOG12793 HOGENOM:HOG000230977 HOVERGEN:HBG013015 GO:GO:0005883
GO:GO:0060052 InterPro:IPR016044 InterPro:IPR018039 Pfam:PF00038
PROSITE:PS00226 GO:GO:0045110 InterPro:IPR010790 Pfam:PF07142
EMBL:M37227 EMBL:X13804 EMBL:AF031879 EMBL:M21964 EMBL:J04517
EMBL:AY112897 IPI:IPI00188524 PIR:A37221 PIR:S02003 UniGene:Rn.108194
ProteinModelPortal:P16884 SMR:P16884 DIP:DIP-105N IntAct:P16884
STRING:P16884 PhosphoSite:P16884 PRIDE:P16884 UCSC:RGD:3159
InParanoid:P16884 ArrayExpress:P16884 Genevestigator:P16884
GermOnline:ENSRNOG00000008716 Uniprot:P16884
Length = 1072
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 27/81 (33%), Positives = 51/81 (62%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKFA----RMEAEIKRLQTEMTEQLKDYRELM 261
TE+ L++ L + ELED+ + + + + +++ E++ + EM QL++Y++L+
Sbjct: 326 TELEALKSTKESLERQRSELEDRHQVDMASYQDAIQQLDNELRNTKWEMAAQLREYQDLL 385
Query: 262 EIKINLDVEIAQYRNLMEAEE 282
+K+ LD+EIA YR L+E EE
Sbjct: 386 NVKMALDIEIAAYRKLLEGEE 406
>UNIPROTKB|P16884 [details] [associations]
symbol:Nefh "Neurofilament heavy polypeptide" species:10116
"Rattus norvegicus" [GO:0005882 "intermediate filament"
evidence=IEA] RGD:3159 GO:GO:0005739 GO:GO:0000226 eggNOG:NOG12793
HOGENOM:HOG000230977 HOVERGEN:HBG013015 GO:GO:0005883 GO:GO:0060052
InterPro:IPR016044 InterPro:IPR018039 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045110 InterPro:IPR010790 Pfam:PF07142 EMBL:M37227
EMBL:X13804 EMBL:AF031879 EMBL:M21964 EMBL:J04517 EMBL:AY112897
IPI:IPI00188524 PIR:A37221 PIR:S02003 UniGene:Rn.108194
ProteinModelPortal:P16884 SMR:P16884 DIP:DIP-105N IntAct:P16884
STRING:P16884 PhosphoSite:P16884 PRIDE:P16884 UCSC:RGD:3159
InParanoid:P16884 ArrayExpress:P16884 Genevestigator:P16884
GermOnline:ENSRNOG00000008716 Uniprot:P16884
Length = 1072
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 27/81 (33%), Positives = 51/81 (62%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKFA----RMEAEIKRLQTEMTEQLKDYRELM 261
TE+ L++ L + ELED+ + + + + +++ E++ + EM QL++Y++L+
Sbjct: 326 TELEALKSTKESLERQRSELEDRHQVDMASYQDAIQQLDNELRNTKWEMAAQLREYQDLL 385
Query: 262 EIKINLDVEIAQYRNLMEAEE 282
+K+ LD+EIA YR L+E EE
Sbjct: 386 NVKMALDIEIAAYRKLLEGEE 406
>RGD|1359177 [details] [associations]
symbol:Krt80 "keratin 80" species:10116 "Rattus norvegicus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0045095 "keratin filament" evidence=IEA] InterPro:IPR001664
InterPro:IPR003054 PRINTS:PR01276 RGD:1359177 GO:GO:0005198
HOVERGEN:HBG013015 InterPro:IPR016044 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095 HSSP:P08670
HOGENOM:HOG000230976 PANTHER:PTHR23239:SF18 KO:K07605 CTD:144501
eggNOG:NOG147372 GeneTree:ENSGT00690000102295 OMA:NQEKEEM
OrthoDB:EOG49GKGM EMBL:AABR03055900 EMBL:AABR03056151 EMBL:BK001581
EMBL:BK001582 IPI:IPI00361747 RefSeq:NP_001008815.1
UniGene:Rn.103689 ProteinModelPortal:Q6IMF1 PRIDE:Q6IMF1
Ensembl:ENSRNOT00000029697 GeneID:315318 KEGG:rno:315318
UCSC:RGD:1359177 InParanoid:Q6IMF1 NextBio:669051
ArrayExpress:Q6IMF1 Genevestigator:Q6IMF1 Uniprot:Q6IMF1
Length = 452
Score = 136 (52.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 31/90 (34%), Positives = 54/90 (60%)
Query: 200 RSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLK 255
R K +++ +++ +L E K E+Q E + K A++EA +++ + +M QL+
Sbjct: 305 RIQKLRSQIVSVKSHCLKLEENIKVAEEQGELAFQDAKDKMAQLEAALQKAKQDMARQLR 364
Query: 256 DYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+Y++LM K+ LD+EIA Y LME EES +
Sbjct: 365 EYQDLMNTKLALDIEIATYHKLMEGEESRM 394
>UNIPROTKB|Q6IMF1 [details] [associations]
symbol:Krt80 "Keratin, type II cytoskeletal 80"
species:10116 "Rattus norvegicus" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0045095 "keratin filament"
evidence=IEA] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
RGD:1359177 GO:GO:0005198 HOVERGEN:HBG013015 InterPro:IPR016044
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095
HSSP:P08670 HOGENOM:HOG000230976 PANTHER:PTHR23239:SF18 KO:K07605
CTD:144501 eggNOG:NOG147372 GeneTree:ENSGT00690000102295
OMA:NQEKEEM OrthoDB:EOG49GKGM EMBL:AABR03055900 EMBL:AABR03056151
EMBL:BK001581 EMBL:BK001582 IPI:IPI00361747 RefSeq:NP_001008815.1
UniGene:Rn.103689 ProteinModelPortal:Q6IMF1 PRIDE:Q6IMF1
Ensembl:ENSRNOT00000029697 GeneID:315318 KEGG:rno:315318
UCSC:RGD:1359177 InParanoid:Q6IMF1 NextBio:669051
ArrayExpress:Q6IMF1 Genevestigator:Q6IMF1 Uniprot:Q6IMF1
Length = 452
Score = 136 (52.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 31/90 (34%), Positives = 54/90 (60%)
Query: 200 RSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLK 255
R K +++ +++ +L E K E+Q E + K A++EA +++ + +M QL+
Sbjct: 305 RIQKLRSQIVSVKSHCLKLEENIKVAEEQGELAFQDAKDKMAQLEAALQKAKQDMARQLR 364
Query: 256 DYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+Y++LM K+ LD+EIA Y LME EES +
Sbjct: 365 EYQDLMNTKLALDIEIATYHKLMEGEESRM 394
>UNIPROTKB|P08729 [details] [associations]
symbol:KRT7 "Keratin, type II cytoskeletal 7" species:9606
"Homo sapiens" [GO:0045095 "keratin filament" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005882
"intermediate filament" evidence=NAS] [GO:0005198 "structural
molecule activity" evidence=NAS] [GO:0007010 "cytoskeleton
organization" evidence=NAS] [GO:0006417 "regulation of translation"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR001664
InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005634 GO:GO:0005794
GO:GO:0019048 GO:GO:0007010 GO:GO:0006417 GO:GO:0005198
GO:GO:0006260 GO:GO:0005882 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
InterPro:IPR009053 SUPFAM:SSF46579 GO:GO:0045095
HOGENOM:HOG000230976 PANTHER:PTHR23239:SF18 KO:K07605 CTD:3855
eggNOG:NOG145985 OMA:RIFEAQI OrthoDB:EOG4TMR28 GO:GO:0051325
EMBL:X03212 EMBL:X13320 EMBL:X13346 EMBL:X13347 EMBL:X13348
EMBL:X13349 EMBL:X13350 EMBL:X13351 EMBL:X13352 EMBL:X13353
EMBL:AJ238246 EMBL:AF509887 EMBL:AF509892 EMBL:AF509891
EMBL:AC007338 EMBL:AC007494 EMBL:BC002700 IPI:IPI00306959
PIR:B24177 PIR:S05602 RefSeq:NP_005547.3 UniGene:Hs.411501
UniGene:Hs.735629 ProteinModelPortal:P08729 SMR:P08729
IntAct:P08729 MINT:MINT-256895 STRING:P08729 PhosphoSite:P08729
DMDM:281185511 SWISS-2DPAGE:P08729 PaxDb:P08729 PRIDE:P08729
DNASU:3855 Ensembl:ENST00000331817 GeneID:3855 KEGG:hsa:3855
UCSC:uc001saa.1 GeneCards:GC12P052626 H-InvDB:HIX0010643
H-InvDB:HIX0079487 HGNC:HGNC:6445 HPA:CAB000028 HPA:HPA007272
MIM:148059 neXtProt:NX_P08729 PharmGKB:PA30233 InParanoid:P08729
PhylomeDB:P08729 ChiTaRS:KRT7 GenomeRNAi:3855 NextBio:15169
ArrayExpress:P08729 Bgee:P08729 CleanEx:HS_KRT7
Genevestigator:P08729 GermOnline:ENSG00000135480 Uniprot:P08729
Length = 469
Score = 136 (52.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 29/81 (35%), Positives = 48/81 (59%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIK 264
D N+ + E + E ++ ++K +EA ++R + +M QL++Y+ELM +K
Sbjct: 323 DNIKNQRAKLEAAIAEAEERGELALKDARAKQEELEAALQRGKQDMARQLREYQELMSVK 382
Query: 265 INLDVEIAQYRNLMEAEESSL 285
+ LD+EIA YR L+E EES L
Sbjct: 383 LALDIEIATYRKLLEGEESRL 403
>ZFIN|ZDB-GENE-060531-65 [details] [associations]
symbol:inaa "internexin neuronal intermediate
filament protein, alpha a" species:7955 "Danio rerio" [GO:0005882
"intermediate filament" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] InterPro:IPR001664
InterPro:IPR006821 Pfam:PF04732 ZFIN:ZDB-GENE-060531-65
GO:GO:0005198 GO:GO:0005882 eggNOG:NOG149366
GeneTree:ENSGT00690000102043 HOGENOM:HOG000230977
HOVERGEN:HBG013015 KO:K07608 OrthoDB:EOG4R5031 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
EMBL:AL928951 IPI:IPI00489543 RefSeq:NP_001138256.1
UniGene:Dr.82634 SMR:A2ATX5 Ensembl:ENSDART00000027213
GeneID:555251 KEGG:dre:555251 CTD:555251 InParanoid:A2ATX5
OMA:REENTDE NextBio:20880876 Uniprot:A2ATX5
Length = 474
Score = 136 (52.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 27/81 (33%), Positives = 49/81 (60%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ LR N L + +E+E+ E Q +++ E++ ++EM L++Y++L+
Sbjct: 322 EIETLRGTNESLERQIREMEEAHNAEVAGYQETIGQLDLELRNTKSEMARHLREYQDLLN 381
Query: 263 IKINLDVEIAQYRNLMEAEES 283
+K+ LD+EIA YR L+E EE+
Sbjct: 382 VKMALDIEIAAYRKLLEGEET 402
>UNIPROTKB|J9P010 [details] [associations]
symbol:NEFH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005882 "intermediate filament" evidence=IEA]
GO:GO:0005882 GeneTree:ENSGT00690000102043 InterPro:IPR016044
InterPro:IPR018039 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR010790
Pfam:PF07142 EMBL:AAEX03014791 Ensembl:ENSCAFT00000050181
Uniprot:J9P010
Length = 1017
Score = 140 (54.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
TE+ L+ L + ELED+ + + Q +++ E++ + EM QL++Y++L+
Sbjct: 327 TELEALKGTKDSLERQRSELEDRHQADIASYQEAIQQLDTELRNTKWEMAAQLREYQDLL 386
Query: 262 EIKINLDVEIAQYRNLMEAEE 282
+K+ LD+EIA YR L+E EE
Sbjct: 387 NVKMALDIEIAAYRKLLEGEE 407
>UNIPROTKB|F1PZZ3 [details] [associations]
symbol:NEFH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005882 "intermediate filament" evidence=IEA]
GO:GO:0005882 GeneTree:ENSGT00690000102043 InterPro:IPR016044
InterPro:IPR018039 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR010790
Pfam:PF07142 EMBL:AAEX03014791 Ensembl:ENSCAFT00000035381
Uniprot:F1PZZ3
Length = 1061
Score = 140 (54.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
TE+ L+ L + ELED+ + + Q +++ E++ + EM QL++Y++L+
Sbjct: 327 TELEALKGTKDSLERQRSELEDRHQADIASYQEAIQQLDTELRNTKWEMAAQLREYQDLL 386
Query: 262 EIKINLDVEIAQYRNLMEAEE 282
+K+ LD+EIA YR L+E EE
Sbjct: 387 NVKMALDIEIAAYRKLLEGEE 407
>UNIPROTKB|Q9H552 [details] [associations]
symbol:Q9H552 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0045095 "keratin filament" evidence=IEA] InterPro:IPR001664
InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 EMBL:AL137067 GO:GO:0045095
HOGENOM:HOG000230976 eggNOG:NOG146769 IPI:IPI00017870 SMR:Q9H552
Ensembl:ENST00000409686 HGNC:HGNC:31058 OMA:WAFSSCT
OrthoDB:EOG4BCDN2 Uniprot:Q9H552
Length = 499
Score = 136 (52.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 26/68 (38%), Positives = 45/68 (66%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+T+ + E ++ +K + +EA ++R + +M QL++Y+ELM + + LD+EIA YR L
Sbjct: 351 ITDAEQRGELAVKDANAKLSELEAALQRAKQDMMGQLREYQELMNVGLTLDIEIATYRKL 410
Query: 278 MEAEESSL 285
+E EES L
Sbjct: 411 LEGEESRL 418
>UNIPROTKB|J9P515 [details] [associations]
symbol:NEFH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005882 "intermediate filament" evidence=IEA]
GO:GO:0005882 GeneTree:ENSGT00690000102043 InterPro:IPR016044
InterPro:IPR018039 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR010790
Pfam:PF07142 EMBL:AAEX03014791 Ensembl:ENSCAFT00000048856
Uniprot:J9P515
Length = 1135
Score = 140 (54.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
TE+ L+ L + ELED+ + + Q +++ E++ + EM QL++Y++L+
Sbjct: 327 TELEALKGTKDSLERQRSELEDRHQADIASYQEAIQQLDTELRNTKWEMAAQLREYQDLL 386
Query: 262 EIKINLDVEIAQYRNLMEAEE 282
+K+ LD+EIA YR L+E EE
Sbjct: 387 NVKMALDIEIAAYRKLLEGEE 407
>UNIPROTKB|F1PNP2 [details] [associations]
symbol:NEFH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005882 "intermediate filament" evidence=IEA]
GO:GO:0005882 GeneTree:ENSGT00690000102043 InterPro:IPR016044
InterPro:IPR018039 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR010790
Pfam:PF07142 OMA:EAKSPGE EMBL:AAEX03014791
Ensembl:ENSCAFT00000019446 Uniprot:F1PNP2
Length = 1143
Score = 140 (54.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELM 261
TE+ L+ L + ELED+ + + Q +++ E++ + EM QL++Y++L+
Sbjct: 327 TELEALKGTKDSLERQRSELEDRHQADIASYQEAIQQLDTELRNTKWEMAAQLREYQDLL 386
Query: 262 EIKINLDVEIAQYRNLMEAEE 282
+K+ LD+EIA YR L+E EE
Sbjct: 387 NVKMALDIEIAAYRKLLEGEE 407
>UNIPROTKB|G3N0V2 [details] [associations]
symbol:KRT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045095 "keratin filament" evidence=IEA] [GO:0030246
"carbohydrate binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0001867 "complement activation, lectin pathway"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
GO:GO:0016020 GO:GO:0005198 GO:GO:0030246 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045095 GO:GO:0001867 PANTHER:PTHR23239:SF18 KO:K07605
GeneTree:ENSGT00610000085977 CTD:3848 OMA:THSLEPY EMBL:DAAA02012881
RefSeq:XP_002687292.1 PRIDE:G3N0V2 Ensembl:ENSBTAT00000065029
GeneID:100301161 KEGG:bta:100301161 Uniprot:G3N0V2
Length = 606
Score = 136 (52.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 27/81 (33%), Positives = 49/81 (60%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIK 264
D+ ++ + +++ + E+ I+ Q+K +E +++ + +M L+DY+ELM K
Sbjct: 409 DSVKKQISSLQQAISDAEQRGENAIKDAQNKLNELEDALQKAKEDMARLLRDYQELMNTK 468
Query: 265 INLDVEIAQYRNLMEAEESSL 285
+ LDVEIA YR L+E EES +
Sbjct: 469 LALDVEIATYRTLLEGEESRM 489
>MGI|MGI:96704 [details] [associations]
symbol:Krt7 "keratin 7" species:10090 "Mus musculus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=ISO] [GO:0045095
"keratin filament" evidence=IEA] InterPro:IPR001664
InterPro:IPR003054 PRINTS:PR01276 MGI:MGI:96704 GO:GO:0005634
GO:GO:0005794 GO:GO:0006417 GO:GO:0005198 GO:GO:0006260
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR009053
SUPFAM:SSF46579 HSSP:P03069 GO:GO:0045095 HOGENOM:HOG000230976
PANTHER:PTHR23239:SF18 KO:K07605 CTD:3855 eggNOG:NOG145985
GeneTree:ENSGT00670000097847 OMA:RIFEAQI OrthoDB:EOG4TMR28
GO:GO:0051325 ChiTaRS:KRT7 EMBL:AF509888 EMBL:AF509890
EMBL:AK002434 EMBL:AK137217 EMBL:AK146914 EMBL:BC030403
IPI:IPI00406377 RefSeq:NP_149064.1 UniGene:Mm.486285
ProteinModelPortal:Q9DCV7 SMR:Q9DCV7 IntAct:Q9DCV7 STRING:Q9DCV7
PhosphoSite:Q9DCV7 PaxDb:Q9DCV7 PRIDE:Q9DCV7
Ensembl:ENSMUST00000068904 GeneID:110310 KEGG:mmu:110310
UCSC:uc007xtd.2 InParanoid:Q9DCV7 NextBio:363745 Bgee:Q9DCV7
CleanEx:MM_KRT7 Genevestigator:Q9DCV7 Uniprot:Q9DCV7
Length = 457
Score = 134 (52.2 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIK 264
DT N+ + E ++ E I+ +K +EA +++ + ++ QL++Y+EL+ K
Sbjct: 317 DTLKNQRAKLESSIAEAEEQGELAIKDAHAKQGELEAALQKAKQDVARQLREYQELLNTK 376
Query: 265 INLDVEIAQYRNLMEAEESSL 285
+ LD+EIA YR L+E EES L
Sbjct: 377 LALDIEIATYRKLLEGEESRL 397
>RGD|1310865 [details] [associations]
symbol:Krt7 "keratin 7" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=IEA;ISO] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA;ISO;ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0045095 "keratin filament" evidence=IEA] [GO:0051325
"interphase" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 RGD:1310865
GO:GO:0005634 GO:GO:0005794 GO:GO:0006417 GO:GO:0005198
GO:GO:0006260 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
InterPro:IPR009053 SUPFAM:SSF46579 HSSP:P03069 GO:GO:0045095
HOGENOM:HOG000230976 PANTHER:PTHR23239:SF18 KO:K07605 CTD:3855
eggNOG:NOG145985 OrthoDB:EOG4TMR28 GO:GO:0051325 EMBL:AABR03058117
EMBL:AABR03059386 EMBL:BK003973 IPI:IPI00421788
RefSeq:NP_001041335.1 UniGene:Rn.7913 ProteinModelPortal:Q6IG12
SMR:Q6IG12 STRING:Q6IG12 PhosphoSite:Q6IG12 PRIDE:Q6IG12
GeneID:300242 KEGG:rno:300242 InParanoid:Q6IG12 NextBio:646619
Genevestigator:Q6IG12 Uniprot:Q6IG12
Length = 457
Score = 134 (52.2 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIK 264
DT N+ + E ++ E I+ +K +EA +++ + ++ QL++Y+EL+ K
Sbjct: 317 DTLKNQRAKLESSIAEAEEQGELAIKDAHAKQGELEAALQKAKQDVARQLREYQELLNTK 376
Query: 265 INLDVEIAQYRNLMEAEESSL 285
+ LD+EIA YR L+E EES L
Sbjct: 377 LALDIEIATYRKLLEGEESRL 397
>UNIPROTKB|Q6IG12 [details] [associations]
symbol:Krt7 "Keratin, type II cytoskeletal 7" species:10116
"Rattus norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0045095 "keratin filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 RGD:1310865
GO:GO:0005634 GO:GO:0005794 GO:GO:0006417 GO:GO:0005198
GO:GO:0006260 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
InterPro:IPR009053 SUPFAM:SSF46579 HSSP:P03069 GO:GO:0045095
HOGENOM:HOG000230976 PANTHER:PTHR23239:SF18 KO:K07605 CTD:3855
eggNOG:NOG145985 OrthoDB:EOG4TMR28 GO:GO:0051325 EMBL:AABR03058117
EMBL:AABR03059386 EMBL:BK003973 IPI:IPI00421788
RefSeq:NP_001041335.1 UniGene:Rn.7913 ProteinModelPortal:Q6IG12
SMR:Q6IG12 STRING:Q6IG12 PhosphoSite:Q6IG12 PRIDE:Q6IG12
GeneID:300242 KEGG:rno:300242 InParanoid:Q6IG12 NextBio:646619
Genevestigator:Q6IG12 Uniprot:Q6IG12
Length = 457
Score = 134 (52.2 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIK 264
DT N+ + E ++ E I+ +K +EA +++ + ++ QL++Y+EL+ K
Sbjct: 317 DTLKNQRAKLESSIAEAEEQGELAIKDAHAKQGELEAALQKAKQDVARQLREYQELLNTK 376
Query: 265 INLDVEIAQYRNLMEAEESSL 285
+ LD+EIA YR L+E EES L
Sbjct: 377 LALDIEIATYRKLLEGEESRL 397
>UNIPROTKB|E2R4B0 [details] [associations]
symbol:KRT78 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045095 "keratin filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095 PANTHER:PTHR23239:SF18
KO:K07605 GeneTree:ENSGT00610000085977 CTD:196374 OMA:LNSFGGC
EMBL:AAEX03015003 RefSeq:XP_543640.2 Ensembl:ENSCAFT00000039436
GeneID:486514 KEGG:cfa:486514 Uniprot:E2R4B0
Length = 517
Score = 134 (52.2 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 32/89 (35%), Positives = 50/89 (56%)
Query: 201 SGKYDTEMNELRAANYRL----TERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKD 256
S + ++ LR N L T+ + E ++ Q+K A +EA ++ + E+ L +
Sbjct: 331 SQRLQGQIENLRTQNANLQATITDAEQRGELALKDAQTKLAELEAALRATKQELARLLHE 390
Query: 257 YRELMEIKINLDVEIAQYRNLMEAEESSL 285
Y+ELM K+ LDVEIA YR L+E EES +
Sbjct: 391 YQELMSTKLALDVEIATYRRLLEGEESRM 419
>UNIPROTKB|F1SGG3 [details] [associations]
symbol:KRT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045095 "keratin filament" evidence=IEA] [GO:0030246
"carbohydrate binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0001867 "complement activation, lectin pathway"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
GO:GO:0016020 GO:GO:0005198 GO:GO:0030246 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045095 GO:GO:0001867 PANTHER:PTHR23239:SF18 KO:K07605
GeneTree:ENSGT00610000085977 CTD:3848 EMBL:CU639398
RefSeq:XP_003481635.1 UniGene:Ssc.8969 Ensembl:ENSSSCT00000000270
GeneID:100049664 KEGG:ssc:100049664 OMA:EINARTN Uniprot:F1SGG3
Length = 629
Score = 135 (52.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 26/81 (32%), Positives = 48/81 (59%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIK 264
D ++ A +++ + E+ ++ Q+K +E +++ + ++ L+DY+ELM K
Sbjct: 419 DNVKKQISAVQQSISDAEQRGENALKDAQNKLNELEEALQKAKEDLARLLRDYQELMNTK 478
Query: 265 INLDVEIAQYRNLMEAEESSL 285
+ LDVEIA YR L+E EES +
Sbjct: 479 LALDVEIATYRTLLEGEESRM 499
>UNIPROTKB|Q5XKE5 [details] [associations]
symbol:KRT79 "Keratin, type II cytoskeletal 79"
species:9606 "Homo sapiens" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0045095 "keratin filament"
evidence=IEA] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
GO:GO:0005198 EMBL:CH471054 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045095 HSSP:P08670 HOGENOM:HOG000230976
PANTHER:PTHR23239:SF18 KO:K07605 EMBL:AC107016 CTD:338785
eggNOG:NOG150909 OMA:HLYEMEL OrthoDB:EOG4S1T74 EMBL:AJ564105
EMBL:BC039148 EMBL:BC063648 EMBL:BK000976 IPI:IPI00241841
RefSeq:NP_787028.1 UniGene:Hs.711471 ProteinModelPortal:Q5XKE5
SMR:Q5XKE5 IntAct:Q5XKE5 STRING:Q5XKE5 PhosphoSite:Q5XKE5
DMDM:296434550 PaxDb:Q5XKE5 PeptideAtlas:Q5XKE5 PRIDE:Q5XKE5
Ensembl:ENST00000330553 GeneID:338785 KEGG:hsa:338785
UCSC:uc001sba.3 GeneCards:GC12M053215 H-InvDB:HIX0201906
HGNC:HGNC:28930 MIM:611160 neXtProt:NX_Q5XKE5 PharmGKB:PA162393725
InParanoid:Q5XKE5 PhylomeDB:Q5XKE5 GenomeRNAi:338785 NextBio:97155
Bgee:Q5XKE5 CleanEx:HS_KRT79 Genevestigator:Q5XKE5 Uniprot:Q5XKE5
Length = 535
Score = 134 (52.2 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 202 GKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELM 261
G+ D + + + E + E ++ Q K ++ + + + ++T L+DY+ELM
Sbjct: 374 GEADAAKKQCQQLQTAIAEAEQRGELALKDAQKKLGDLDVALHQAKEDLTRLLRDYQELM 433
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+K+ LDVEIA YR L+E+EES +
Sbjct: 434 NVKLALDVEIATYRKLLESEESRM 457
>UNIPROTKB|F1MAC2 [details] [associations]
symbol:Krt78 "Protein Krt78" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0045095 "keratin filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR016044
PANTHER:PTHR23239 Pfam:PF00038 GO:GO:0045095 PANTHER:PTHR23239:SF18
GeneTree:ENSGT00610000085977 IPI:IPI00767381
Ensembl:ENSRNOT00000047751 OMA:REYGGQV Uniprot:F1MAC2
Length = 799
Score = 136 (52.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 31/84 (36%), Positives = 48/84 (57%)
Query: 203 KYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYR 258
K +++ LR N L + E Q E Q+K +E ++ + +M + L+DY+
Sbjct: 332 KLQSQIGSLRKQNDSLQSAIADAEQQGEMALRDAQAKLDELEGALRAAKQDMAQMLRDYQ 391
Query: 259 ELMEIKINLDVEIAQYRNLMEAEE 282
ELM K++LDVEIA YR L+E+EE
Sbjct: 392 ELMGTKLSLDVEIAMYRRLLESEE 415
>UNIPROTKB|E2R2C8 [details] [associations]
symbol:KRT80 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045095 "keratin filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198
InterPro:IPR016044 PANTHER:PTHR23239 Pfam:PF00038 GO:GO:0045095
PANTHER:PTHR23239:SF18 KO:K07605 CTD:144501
GeneTree:ENSGT00690000102295 OMA:NQEKEEM EMBL:AAEX03015012
EMBL:AAEX03015013 RefSeq:XP_543660.2 Ensembl:ENSCAFT00000011729
GeneID:486534 KEGG:cfa:486534 NextBio:20860297 Uniprot:E2R2C8
Length = 453
Score = 132 (51.5 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 31/87 (35%), Positives = 54/87 (62%)
Query: 200 RSGKYDTEMNELRAANYRLTERNKELEDQIE--YEQSK--FARMEAEIKRLQTEMTEQLK 255
R K +++ +++ +L E K E+Q E ++ +K A++EA + + + +M QL+
Sbjct: 305 RIQKLRSQILSIKSHCLKLEESIKVAEEQGELAFQDAKHKLAQLEAALHQAKQDMARQLR 364
Query: 256 DYRELMEIKINLDVEIAQYRNLMEAEE 282
+Y+ELM K+ LD+EIA YR L+E EE
Sbjct: 365 EYQELMNTKLALDIEIATYRKLVEGEE 391
>ZFIN|ZDB-GENE-030131-9669 [details] [associations]
symbol:zgc:65851 "zgc:65851" species:7955 "Danio
rerio" [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001664
InterPro:IPR002957 InterPro:IPR006821 Pfam:PF04732 PRINTS:PR01248
ZFIN:ZDB-GENE-030131-9669 GO:GO:0005198 GO:GO:0005882
GeneTree:ENSGT00690000102043 HOGENOM:HOG000230977
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 HSSP:P08670
EMBL:BX322550 EMBL:BC056314 EMBL:BC065939 IPI:IPI00482009
RefSeq:NP_955828.1 UniGene:Dr.82707 SMR:Q7SZP4 STRING:Q7SZP4
Ensembl:ENSDART00000018351 GeneID:321113 KEGG:dre:321113
eggNOG:NOG147864 InParanoid:Q7SZP4 OMA:IAEMEDR OrthoDB:EOG46MBJZ
NextBio:20807237 Uniprot:Q7SZP4
Length = 562
Score = 134 (52.2 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ L+A N L + E+ED+ E Q ++E+ ++ + EM+ L++Y++L+
Sbjct: 324 EIEALKAHNEALERQLAEMEDRHSNEIGELQDTIQQLESALRSTKGEMSRHLREYQDLLN 383
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
+K+ LD+EIA YR L+E EE L
Sbjct: 384 VKMALDIEIAAYRKLLEGEECRL 406
Score = 38 (18.4 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 14/69 (20%), Positives = 30/69 (43%)
Query: 88 VKLYNKGSEEQSLGNWQLVRKVQG---EVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHE 144
+K Y K ++ +L +L +KV+ E+ + H E ++ +VE +
Sbjct: 198 LKGYRKDVDDATLSRLELEKKVESLLDEIAFLRRVHEEELQELQASLQATQVSVEMDVSK 257
Query: 145 PPHNIVMKN 153
P + +K+
Sbjct: 258 PDLAVALKD 266
>ZFIN|ZDB-GENE-060312-44 [details] [associations]
symbol:neflb "neurofilament, light polypeptide b"
species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248
ZFIN:ZDB-GENE-060312-44 GO:GO:0005198 GO:GO:0005882
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 KO:K04572
EMBL:BC114232 IPI:IPI00742516 RefSeq:NP_001034927.1
UniGene:Dr.162322 ProteinModelPortal:Q29RE8 SMR:Q29RE8 PRIDE:Q29RE8
GeneID:664698 KEGG:dre:664698 CTD:664698 InParanoid:Q29RE8
NextBio:20902314 Bgee:Q29RE8 Uniprot:Q29RE8
Length = 579
Score = 133 (51.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 28/83 (33%), Positives = 50/83 (60%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYREL 260
D E+ + N L + +E+E++ E Q +E E++ +++EM LK+Y++L
Sbjct: 310 DLEIEACQGLNQVLERQLQEVEEKQSAEIAALQDTIGDLENELRTMKSEMARYLKEYQDL 369
Query: 261 MEIKINLDVEIAQYRNLMEAEES 283
+ +K+ LD+EIA YR L+E EE+
Sbjct: 370 LNVKMALDIEIAAYRKLLEGEET 392
>ZFIN|ZDB-GENE-050522-205 [details] [associations]
symbol:nefma "neurofilament, medium polypeptide a"
species:7955 "Danio rerio" [GO:0005882 "intermediate filament"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001664 InterPro:IPR002957 InterPro:IPR006821
Pfam:PF04732 PRINTS:PR01248 ZFIN:ZDB-GENE-050522-205 GO:GO:0005198
GO:GO:0005882 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GeneTree:ENSGT00560000076873 InterPro:IPR011098 PROSITE:PS51109
EMBL:CU467622 IPI:IPI00831776 Ensembl:ENSDART00000080256
ArrayExpress:F1QCR7 Bgee:F1QCR7 Uniprot:F1QCR7
Length = 849
Score = 135 (52.6 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ +R L + ++ED+ + Q ++E E+K + EM L++Y++L+
Sbjct: 313 ELESVRGTKESLERQLNDIEDRHNNDLASLQETIHQLENELKSTKWEMARHLREYQDLLN 372
Query: 263 IKINLDVEIAQYRNLMEAEESSLPTY 288
+K+ LD+EIA YR L+E EES T+
Sbjct: 373 VKMALDIEIAAYRKLLEGEESHFSTF 398
>UNIPROTKB|F1SGI2 [details] [associations]
symbol:KRT84 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045616 "regulation of keratinocyte differentiation"
evidence=IEA] [GO:0045095 "keratin filament" evidence=IEA]
[GO:0030280 "structural constituent of epidermis" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045616 GO:GO:0045095
PANTHER:PTHR23239:SF18 GO:GO:0030280 GeneTree:ENSGT00670000097847
OMA:EEIRICE EMBL:FP102426 Ensembl:ENSSSCT00000000260 Uniprot:F1SGI2
Length = 487
Score = 132 (51.5 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 29/84 (34%), Positives = 49/84 (58%)
Query: 203 KYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYR 258
+ + E+ +A +L + E Q E +SK A +E +++ + +M QL++Y+
Sbjct: 392 RLNAEIEHAKAQRAKLEAAVAQAEQQGEAALNDAKSKLADLEGALQQAKQDMARQLREYQ 451
Query: 259 ELMEIKINLDVEIAQYRNLMEAEE 282
ELM +K+ LD+EIA YR L+E EE
Sbjct: 452 ELMNVKLALDIEIATYRRLLEGEE 475
>UNIPROTKB|F1N362 [details] [associations]
symbol:KRT84 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045616 "regulation of keratinocyte differentiation"
evidence=IEA] [GO:0045095 "keratin filament" evidence=IEA]
[GO:0030280 "structural constituent of epidermis" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045616 GO:GO:0045095
PANTHER:PTHR23239:SF18 GO:GO:0030280 KO:K07605
GeneTree:ENSGT00670000097847 CTD:3890 OMA:EEIRICE EMBL:DAAA02012886
IPI:IPI00708493 RefSeq:NP_001179264.1 UniGene:Bt.106460
PRIDE:F1N362 Ensembl:ENSBTAT00000021519 GeneID:539944
KEGG:bta:539944 NextBio:20878315 Uniprot:F1N362
Length = 593
Score = 133 (51.9 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 25/65 (38%), Positives = 42/65 (64%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+ E ++ E + + K A +E +++ + +M QLK+Y+ELM +K+ LD+EIA YR L
Sbjct: 401 VAEAEQQGEAALNDAKCKLAELEGALQQAKQDMARQLKEYQELMNVKLALDIEIATYRRL 460
Query: 278 MEAEE 282
+E EE
Sbjct: 461 LEGEE 465
>UNIPROTKB|E2QUU4 [details] [associations]
symbol:KRT71 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045095 "keratin filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095 PANTHER:PTHR23239:SF18
GeneTree:ENSGT00610000085801 EMBL:AAEX03015003
Ensembl:ENSCAFT00000011548 Uniprot:E2QUU4
Length = 599
Score = 133 (51.9 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 24/53 (45%), Positives = 38/53 (71%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
QSK+ +EA + + + E+ L++Y+EL+ +K+ LDVEIA YR L+E EES +
Sbjct: 478 QSKYKELEAALHQAKEELARMLREYQELLSVKLALDVEIATYRKLLEGEESRM 530
>ZFIN|ZDB-GENE-091117-1 [details] [associations]
symbol:nefla "neurofilament, light polypeptide a"
species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005882 "intermediate filament"
evidence=IEA] InterPro:IPR001664 ZFIN:ZDB-GENE-091117-1
GO:GO:0005198 GO:GO:0005882 GeneTree:ENSGT00690000102043
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 EMBL:CU467622 IPI:IPI00833101
Ensembl:ENSDART00000136196 Bgee:E9QFD5 Uniprot:E9QFD5
Length = 616
Score = 135 (52.6 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 29/81 (35%), Positives = 50/81 (61%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E++ + N L ++ +E+ED+ E Q + +E E++ + EM LK+Y++L+
Sbjct: 318 EIDACKGLNESLEKQLREVEDKQSAEVAAMQDTISDLEDELRATKGEMARYLKEYQDLLN 377
Query: 263 IKINLDVEIAQYRNLMEAEES 283
+K+ LD+EIA YR L+E EES
Sbjct: 378 VKMALDIEIAAYRKLLEGEES 398
Score = 37 (18.1 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 14/51 (27%), Positives = 28/51 (54%)
Query: 56 YESEERTSSGFQVTSSAKG-NMEIT---EVDPDGKFVKLYNKGSEEQSLGN 102
Y S RTSSG ++S + +++I+ +V + + V+ K ++ Q L +
Sbjct: 49 YASPGRTSSGLLLSSPGRSVDIDISHAAQVSSEFRAVRTQEK-AQLQDLND 98
>UNIPROTKB|Q5K2N3 [details] [associations]
symbol:KRT8 "Keratin, type II cytoskeletal 8" species:7886
"Protopterus aethiopicus" [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005737
GO:GO:0005654 GO:GO:0005198 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0016363 GO:GO:0045095 PANTHER:PTHR23239:SF18 EMBL:AJ785798
ProteinModelPortal:Q5K2N3 SMR:Q5K2N3 PRIDE:Q5K2N3 Uniprot:Q5K2N3
Length = 497
Score = 131 (51.2 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+ E + E ++ Q++ ++ + + + +M QL++Y+ELM +K+ LD+EIA YR L
Sbjct: 354 IAEAEERGEQAVKNAQAQLQELQNALTQAKQDMARQLREYQELMNVKLALDIEIATYRKL 413
Query: 278 MEAEESSL 285
+E EES L
Sbjct: 414 LEGEESRL 421
>ZFIN|ZDB-GENE-000607-83 [details] [associations]
symbol:krt4 "keratin 4" species:7955 "Danio rerio"
[GO:0045095 "keratin filament" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0005882
"intermediate filament" evidence=IEA] InterPro:IPR001664
InterPro:IPR003054 PRINTS:PR01276 ZFIN:ZDB-GENE-000607-83
GO:GO:0005198 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045095 HSSP:P08670 HOGENOM:HOG000230976
PANTHER:PTHR23239:SF18 KO:K07605 CTD:3851 EMBL:AF134850
IPI:IPI00834037 RefSeq:NP_571584.1 UniGene:Dr.75111
ProteinModelPortal:Q9PV92 SMR:Q9PV92 STRING:Q9PV92 PRIDE:Q9PV92
GeneID:794486 KEGG:dre:794486 NextBio:20931873 ArrayExpress:Q9PV92
Bgee:Q9PV92 Uniprot:Q9PV92
Length = 498
Score = 131 (51.2 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 27/87 (31%), Positives = 52/87 (59%)
Query: 203 KYDTEMNELRAANYRLTERNKELEDQ----IEYEQSKFARMEAEIKRLQTEMTEQLKDYR 258
+ E++ ++A L + E E++ ++ + + +E ++R + +M Q+++Y+
Sbjct: 340 RLQNEIDAVKAQRANLEAQIAEAEERGELAVKDAKLRIRELEEALQRAKQDMARQVREYQ 399
Query: 259 ELMEIKINLDVEIAQYRNLMEAEESSL 285
ELM +K+ LD+EIA YR L+E EES L
Sbjct: 400 ELMNVKLALDIEIATYRKLLEGEESRL 426
>MGI|MGI:1921377 [details] [associations]
symbol:Krt80 "keratin 80" species:10090 "Mus musculus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0045095
"keratin filament" evidence=IEA] InterPro:IPR001664
InterPro:IPR003054 PRINTS:PR01276 MGI:MGI:1921377 GO:GO:0005198
HOVERGEN:HBG013015 InterPro:IPR016044 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095 HOGENOM:HOG000230976
PANTHER:PTHR23239:SF18 KO:K07605 CTD:144501 eggNOG:NOG147372
GeneTree:ENSGT00690000102295 OMA:NQEKEEM OrthoDB:EOG49GKGM
EMBL:BC119366 EMBL:BC120601 IPI:IPI00660358 RefSeq:NP_083046.2
UniGene:Mm.440055 ProteinModelPortal:Q0VBK2 SMR:Q0VBK2
PhosphoSite:Q0VBK2 PaxDb:Q0VBK2 PRIDE:Q0VBK2
Ensembl:ENSMUST00000077196 GeneID:74127 KEGG:mmu:74127
UCSC:uc007xta.1 InParanoid:Q0VBK2 NextBio:339850 Bgee:Q0VBK2
CleanEx:MM_KRT80 Genevestigator:Q0VBK2 Uniprot:Q0VBK2
Length = 452
Score = 130 (50.8 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 30/90 (33%), Positives = 53/90 (58%)
Query: 200 RSGKYDTEMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLK 255
R K +++ +++ +L E K E+Q E + K A++E +++ + +M QL+
Sbjct: 305 RIQKLRSQIVSVKSHCLKLEENIKVAEEQGELAFQDAKDKMAQLENALQKAKQDMARQLR 364
Query: 256 DYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+Y++LM K+ LD+EIA Y LME EES +
Sbjct: 365 EYQDLMNTKLALDIEIATYHKLMEGEESRM 394
>UNIPROTKB|I3LQN8 [details] [associations]
symbol:KRT4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IEA] [GO:0030855 "epithelial cell
differentiation" evidence=IEA] [GO:0045095 "keratin filament"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
GO:GO:0005198 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0050680
GO:GO:0030855 GO:GO:0045095 PANTHER:PTHR23239:SF18
GeneTree:ENSGT00610000085801 OMA:DQHGDSL EMBL:CU457755
Ensembl:ENSSSCT00000031030 Uniprot:I3LQN8
Length = 535
Score = 131 (51.2 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 234 SKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
SK A +EA +K+ + E+ L++Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 408 SKRAELEAALKKAKEELARMLREYQELMSVKLALDIEIATYRKLLEGEE 456
>UNIPROTKB|H9L107 [details] [associations]
symbol:Gga.56207 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0045095 "keratin filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095 PANTHER:PTHR23239:SF18
GeneTree:ENSGT00610000085801 EMBL:AADN02076524 EMBL:AADN02076525
EMBL:AADN02076526 EMBL:AADN02076527 Ensembl:ENSGALT00000029499
OMA:LYETELC Uniprot:H9L107
Length = 646
Score = 132 (51.5 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
+ K +E +K+ + ++ +QL+DY+ELM +K+ LD+EIA YR L+E EE
Sbjct: 403 RDKLTELETALKKAKADLAQQLRDYQELMNVKLALDIEIATYRKLLEGEE 452
>UNIPROTKB|P04261 [details] [associations]
symbol:P04261 "Keratin, type II cytoskeletal 60 kDa,
component III" species:9913 "Bos taurus" [GO:0045095 "keratin
filament" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR003054 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095 PANTHER:PTHR23239:SF18
eggNOG:NOG146769 EMBL:K03535 IPI:IPI00686209 PIR:A02947
UniGene:Bt.13162 ProteinModelPortal:P04261 STRING:P04261
PRIDE:P04261 InParanoid:P04261 OrthoDB:EOG4P8FJ6 Uniprot:P04261
Length = 182
Score = 119 (46.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+SK A +E +++ + +M L++Y+ELM K+ LDVEIA YR L+E EE L
Sbjct: 11 RSKLADVEDALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECRL 63
>UNIPROTKB|G3V908 [details] [associations]
symbol:Kb15 "Type II keratin Kb15" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0045095 "keratin filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 EMBL:CH474035 GO:GO:0045095
PANTHER:PTHR23239:SF18 GeneTree:ENSGT00610000085801
UniGene:Rn.49197 ProteinModelPortal:G3V908 PRIDE:G3V908
Ensembl:ENSRNOT00000038242 RGD:1565564 OMA:RTTKMEI Uniprot:G3V908
Length = 537
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIK 264
D + A + + + E ++ ++K A +E +++ + +M QL++Y+ELM +K
Sbjct: 374 DNLKKQCAALQASIADAEQRGELALKDAKNKLAELEDALQKAKQDMARQLREYQELMNVK 433
Query: 265 INLDVEIAQYRNLMEAEESSL 285
+ LD+EIA YR L+E EE L
Sbjct: 434 LALDIEIATYRKLLEGEECRL 454
>ZFIN|ZDB-GENE-070209-50 [details] [associations]
symbol:zgc:158846 "zgc:158846" species:7955 "Danio
rerio" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0045095 "keratin filament" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005882 "intermediate
filament" evidence=IEA] InterPro:IPR001664 InterPro:IPR003054
PRINTS:PR01276 ZFIN:ZDB-GENE-070209-50 GO:GO:0005198
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095
OMA:HTHSERI PANTHER:PTHR23239:SF18 GeneTree:ENSGT00670000097847
EMBL:CR753817 EMBL:BC154249 IPI:IPI00835722 UniGene:Dr.4854
SMR:A8KBU6 STRING:A8KBU6 Ensembl:ENSDART00000104074 Uniprot:A8KBU6
Length = 486
Score = 129 (50.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 30/92 (32%), Positives = 54/92 (58%)
Query: 200 RSGKYDTEMNELRA--ANY--RLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLK 255
R + +EM ++ +N+ ++ E + E ++ + + +EA + R + +M Q++
Sbjct: 298 RIARIHSEMELIKGQFSNHEAQIKEAEERGELAVKDARLRLQELEAALLRAKQDMARQVR 357
Query: 256 DYRELMEIKINLDVEIAQYRNLMEAEESSLPT 287
+Y+ LM IK+ LD+EIA YR L+E EES L T
Sbjct: 358 EYQSLMNIKLALDIEIATYRKLLEGEESRLYT 389
>UNIPROTKB|Q9NSB2 [details] [associations]
symbol:KRT84 "Keratin, type II cuticular Hb4" species:9606
"Homo sapiens" [GO:0045616 "regulation of keratinocyte
differentiation" evidence=IEA] [GO:0030280 "structural constituent
of epidermis" evidence=NAS] [GO:0001942 "hair follicle development"
evidence=NAS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0035878 "nail development" evidence=NAS] [GO:0005200
"structural constituent of cytoskeleton" evidence=NAS] [GO:0045095
"keratin filament" evidence=IDA] InterPro:IPR001664
InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005200 GO:GO:0001942
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0045616
GO:GO:0045095 HOGENOM:HOG000230976 PANTHER:PTHR23239:SF18
GO:GO:0030280 KO:K07605 EMBL:AC078865 EMBL:Y19209 EMBL:AK314030
EMBL:BC069647 EMBL:AJ628420 IPI:IPI00300052 RefSeq:NP_149034.2
UniGene:Hs.272336 ProteinModelPortal:Q9NSB2 SMR:Q9NSB2
IntAct:Q9NSB2 STRING:Q9NSB2 PhosphoSite:Q9NSB2 DMDM:311033397
PaxDb:Q9NSB2 PRIDE:Q9NSB2 Ensembl:ENST00000257951 GeneID:3890
KEGG:hsa:3890 UCSC:uc001sah.1 CTD:3890 GeneCards:GC12M052771
HGNC:HGNC:6461 MIM:602766 neXtProt:NX_Q9NSB2 PharmGKB:PA30250
eggNOG:NOG149575 InParanoid:Q9NSB2 OMA:EEIRICE OrthoDB:EOG4X3H17
PhylomeDB:Q9NSB2 GenomeRNAi:3890 NextBio:15273 Bgee:Q9NSB2
CleanEx:HS_KRT84 Genevestigator:Q9NSB2 GermOnline:ENSG00000161849
GO:GO:0035878 Uniprot:Q9NSB2
Length = 600
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 32/83 (38%), Positives = 46/83 (55%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYEQS----KFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ +A +L E E Q E S K A +E +++ + +M QL +Y+ELM
Sbjct: 394 EIEHAKAQRAKLEAAVAEAEQQGEATLSDAKCKLADLECALQQAKQDMARQLCEYQELMN 453
Query: 263 IKINLDVEIAQYRNLMEAEESSL 285
K+ LD+EIA YR L+E EES L
Sbjct: 454 AKLGLDIEIATYRRLLEGEESRL 476
>ZFIN|ZDB-GENE-031118-10 [details] [associations]
symbol:wu:fd11e11 "wu:fd11e11" species:7955 "Danio
rerio" [GO:0045095 "keratin filament" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0005882
"intermediate filament" evidence=IEA] InterPro:IPR001664
InterPro:IPR003054 PRINTS:PR01276 ZFIN:ZDB-GENE-031118-10
GO:GO:0005198 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095
PANTHER:PTHR23239:SF18 GeneTree:ENSGT00670000097847 EMBL:CU862015
IPI:IPI00865598 RefSeq:XP_003199098.1 UniGene:Dr.77764
ProteinModelPortal:F1Q4X3 PRIDE:F1Q4X3 Ensembl:ENSDART00000045669
GeneID:386799 KEGG:dre:386799 NextBio:20814021 Bgee:F1Q4X3
Uniprot:F1Q4X3
Length = 376
Score = 127 (49.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 23/69 (33%), Positives = 43/69 (62%)
Query: 217 RLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRN 276
++ E ++ E+ + + +E +++ + EM QL+DY+ELM +K+ LD+EIA Y+
Sbjct: 306 KIKEAERDGEEAVLDATEQIRLLEEALQKAKKEMARQLRDYQELMNLKLALDIEIATYKK 365
Query: 277 LMEAEESSL 285
L+E EE +
Sbjct: 366 LLEGEEDRI 374
>UNIPROTKB|A6QNX5 [details] [associations]
symbol:KRT78 "Keratin, type II cytoskeletal 78"
species:9913 "Bos taurus" [GO:0045095 "keratin filament"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
GO:GO:0005198 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045095 HOGENOM:HOG000230976 PANTHER:PTHR23239:SF18 KO:K07605
GeneTree:ENSGT00610000085977 EMBL:BC149049 IPI:IPI00867420
RefSeq:NP_001095547.1 UniGene:Bt.3611 ProteinModelPortal:A6QNX5
PRIDE:A6QNX5 Ensembl:ENSBTAT00000000815 GeneID:523221
KEGG:bta:523221 CTD:196374 eggNOG:NOG146230 InParanoid:A6QNX5
OMA:LNSFGGC OrthoDB:EOG4M65HV NextBio:20873689 ArrayExpress:A6QNX5
Uniprot:A6QNX5
Length = 528
Score = 128 (50.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
Q+K A +EA ++ + ++ L DY+ELM +K++LD+EIA YR L+E EE
Sbjct: 366 QTKLAELEAALRTAKQDIARLLHDYQELMSVKLSLDIEIATYRRLLEGEE 415
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 3 VVFETRIEEVQKKR 16
V T++EE+QKKR
Sbjct: 161 VRLRTQLEELQKKR 174
>UNIPROTKB|H0YI76 [details] [associations]
symbol:KRT5 "Keratin, type II cytoskeletal 5" species:9606
"Homo sapiens" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0045095 "keratin filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095 PANTHER:PTHR23239:SF18
HGNC:HGNC:6442 ChiTaRS:KRT5 EMBL:AC055736 PRIDE:H0YI76
Ensembl:ENST00000548409 Bgee:H0YI76 Uniprot:H0YI76
Length = 201
Score = 120 (47.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++K A +E +++ + +M L++Y+ELM K+ LDVEIA YR L+E EE L
Sbjct: 137 RNKLAELEEALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECRL 189
>UNIPROTKB|E7EMV2 [details] [associations]
symbol:NEFM "Neurofilament medium polypeptide" species:9606
"Homo sapiens" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001664
InterPro:IPR002957 InterPro:IPR006821 Pfam:PF04732 PRINTS:PR01248
GO:GO:0005737 GO:GO:0005198 GO:GO:0005882 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
EMBL:AF106564 HGNC:HGNC:7734 ChiTaRS:NEFM IPI:IPI00908745
ProteinModelPortal:E7EMV2 SMR:E7EMV2 Ensembl:ENST00000518131
UCSC:uc011lac.1 ArrayExpress:E7EMV2 Bgee:E7EMV2 Uniprot:E7EMV2
Length = 698
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 25/86 (29%), Positives = 51/86 (59%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYEQSKFA----RMEAEIKRLQTEMTEQLKDYRELME 262
E+ +R L + ++E++ ++ S + ++E E++ + EM L++Y++L+
Sbjct: 330 ELESVRGTKESLERQLSDIEERHNHDLSSYQDTIQQLENELRGTKWEMARHLREYQDLLN 389
Query: 263 IKINLDVEIAQYRNLMEAEESSLPTY 288
+K+ LD+EIA YR L+E EE+ T+
Sbjct: 390 VKMALDIEIAAYRKLLEGEETRFSTF 415
>UNIPROTKB|E2R489 [details] [associations]
symbol:KRT84 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045616 "regulation of keratinocyte
differentiation" evidence=IEA] [GO:0045095 "keratin filament"
evidence=IEA] [GO:0030280 "structural constituent of epidermis"
evidence=IEA] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045616 GO:GO:0045095
PANTHER:PTHR23239:SF18 GO:GO:0030280 KO:K07605
GeneTree:ENSGT00670000097847 CTD:3890 OMA:EEIRICE EMBL:AAEX03015007
RefSeq:XP_543652.1 ProteinModelPortal:E2R489
Ensembl:ENSCAFT00000011656 GeneID:486526 KEGG:cfa:486526
NextBio:20860289 Uniprot:E2R489
Length = 586
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 24/65 (36%), Positives = 42/65 (64%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+ E ++ E + + K A +E +++ + +M QL++Y+ELM +K+ LD+EIA YR L
Sbjct: 396 VAEAEQQGEAALTDAKCKLAELEGALQQAKQDMARQLREYQELMNVKLALDIEIATYRRL 455
Query: 278 MEAEE 282
+E EE
Sbjct: 456 LEGEE 460
>UNIPROTKB|H9KZ27 [details] [associations]
symbol:KRT75 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0045095 "keratin filament" evidence=IEA] InterPro:IPR001664
InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045095 PANTHER:PTHR23239:SF18 GeneTree:ENSGT00610000085801
EMBL:AADN02076543 EMBL:AADN02076544 EMBL:AADN02076545
ProteinModelPortal:H9KZ27 Ensembl:ENSGALT00000003703 OMA:VNICKYL
Uniprot:H9KZ27
Length = 522
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 26/76 (34%), Positives = 47/76 (61%)
Query: 212 RAANYRLTERNKELEDQIEYE--QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDV 269
+ AN + + E +I + ++K A +E +++ + ++ QL++Y+ELM +K+ LD+
Sbjct: 375 QCANLKAAIADAEERGEIALKDAKAKLAELEDALQQAKADLARQLREYQELMNVKLALDI 434
Query: 270 EIAQYRNLMEAEESSL 285
EIA YR L+E EE L
Sbjct: 435 EIATYRKLLEGEECRL 450
>UNIPROTKB|F1ND22 [details] [associations]
symbol:F1ND22 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005883
"neurofilament" evidence=IEA] [GO:0045110 "intermediate filament
bundle assembly" evidence=IEA] [GO:0060052 "neurofilament
cytoskeleton organization" evidence=IEA] GO:GO:0005739
GO:GO:0000226 GeneTree:ENSGT00690000102043 GO:GO:0005883
GO:GO:0060052 InterPro:IPR016044 InterPro:IPR018039 Pfam:PF00038
PROSITE:PS00226 GO:GO:0045110 EMBL:AADN02050478 EMBL:AADN02050476
EMBL:AADN02050477 IPI:IPI00572764 Ensembl:ENSGALT00000013122
OMA:AKSPPEI Uniprot:F1ND22
Length = 950
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 27/87 (31%), Positives = 52/87 (59%)
Query: 206 TEMNELRAANYRLTERNKELE-----DQIEYEQSKFARMEAEIKRLQTEMTEQLKDYREL 260
TE+ L+ L + ++ E D + Y+++ +++ E++ + EM QL++Y++L
Sbjct: 279 TELEALKGTQESLERQRQDSEERHHADVLSYQET-IQQLDNELRNTKWEMAAQLREYQDL 337
Query: 261 MEIKINLDVEIAQYRNLMEAEESSLPT 287
+ +K+ LD+EIA YR L+E EE + T
Sbjct: 338 LNVKMALDIEIAAYRKLLEGEEYRIET 364
>UNIPROTKB|F5H8G2 [details] [associations]
symbol:IFLTD1 "Intermediate filament tail domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] InterPro:IPR001664 GO:GO:0005737
GO:GO:0005635 GO:GO:0005198 GO:GO:0008283 PANTHER:PTHR23239
InterPro:IPR001322 Pfam:PF00932 EMBL:AC022367 HGNC:HGNC:26683
EMBL:AC092451 IPI:IPI01013093 ProteinModelPortal:F5H8G2 SMR:F5H8G2
Ensembl:ENST00000545543 ArrayExpress:F5H8G2 Bgee:F5H8G2
Uniprot:F5H8G2
Length = 144
Score = 105 (42.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 99 SLGNWQLVRKVQGEVKTSFKFHRTLKIEAGGTVTVWSFNVEGATHEPPHNIVMKNQ-KFG 157
++G+ L + V G+ + ++F + ++A TVTVW+ E A H+PP + + K Q KF
Sbjct: 2 AIGDHILQQNVNGQTISLYRFLPNIVMQANSTVTVWAAASE-AKHQPPSDFLWKEQDKFR 60
Query: 158 SGDEISTILLNTDGE 172
+ + TIL +G+
Sbjct: 61 ASPDCITILCKPNGQ 75
>MGI|MGI:97314 [details] [associations]
symbol:Nefm "neurofilament, medium polypeptide" species:10090
"Mus musculus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=ISO] [GO:0005882
"intermediate filament" evidence=IEA] [GO:0005883 "neurofilament"
evidence=IDA] [GO:0008088 "axon cargo transport" evidence=IMP]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0031133 "regulation of
axon diameter" evidence=IMP] [GO:0031594 "neuromuscular junction"
evidence=IDA] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0045104 "intermediate filament cytoskeleton organization"
evidence=IMP] [GO:0045110 "intermediate filament bundle assembly"
evidence=IGI] [GO:0060052 "neurofilament cytoskeleton organization"
evidence=IGI;IMP] InterPro:IPR001664 InterPro:IPR002957
InterPro:IPR006821 Pfam:PF04732 PRINTS:PR01248 MGI:MGI:97314
GO:GO:0000226 GO:GO:0005198 GO:GO:0031594 GO:GO:0008088
HOVERGEN:HBG013015 GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0031133 GeneTree:ENSGT00560000076873 GO:GO:0045110
OrthoDB:EOG4VMFFD CTD:4741 eggNOG:NOG151229 KO:K04573 EMBL:X05640
EMBL:DQ201636 EMBL:AK051696 EMBL:AK164318 EMBL:AK165041
EMBL:BC119602 EMBL:BC128564 EMBL:M20481 IPI:IPI00323800 PIR:B43772
PIR:S00030 RefSeq:NP_032717.2 UniGene:Mm.390700
ProteinModelPortal:P08553 SMR:P08553 IntAct:P08553 STRING:P08553
PhosphoSite:P08553 UCD-2DPAGE:P08553 PaxDb:P08553 PRIDE:P08553
DNASU:18040 Ensembl:ENSMUST00000022638 GeneID:18040 KEGG:mmu:18040
UCSC:uc007ulo.1 InParanoid:P08553 NextBio:293149 Bgee:P08553
CleanEx:MM_NEFM Genevestigator:P08553 GermOnline:ENSMUSG00000022054
Uniprot:P08553
Length = 848
Score = 130 (50.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 25/86 (29%), Positives = 51/86 (59%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYEQSKFA----RMEAEIKRLQTEMTEQLKDYRELME 262
E+ +R L + ++E++ ++ S + ++E E++ + EM L++Y++L+
Sbjct: 328 ELESVRGTKESLERQLSDIEERHNHDLSSYQDTIQQLENELRGTKWEMARHLREYQDLLN 387
Query: 263 IKINLDVEIAQYRNLMEAEESSLPTY 288
+K+ LD+EIA YR L+E EE+ T+
Sbjct: 388 VKMALDIEIAAYRKLLEGEETRFSTF 413
>UNIPROTKB|E2QSV1 [details] [associations]
symbol:NEFM "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060052 "neurofilament cytoskeleton
organization" evidence=IEA] [GO:0045110 "intermediate filament
bundle assembly" evidence=IEA] [GO:0031594 "neuromuscular junction"
evidence=IEA] [GO:0031133 "regulation of axon diameter"
evidence=IEA] [GO:0008088 "axon cargo transport" evidence=IEA]
[GO:0005883 "neurofilament" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR002957
InterPro:IPR006821 Pfam:PF04732 PRINTS:PR01248 GO:GO:0000226
GO:GO:0005198 GO:GO:0031594 GO:GO:0008088 GO:GO:0005883
GO:GO:0060052 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0031133
GO:GO:0045110 Ensembl:ENSCAFT00000014336 Uniprot:E2QSV1
Length = 852
Score = 130 (50.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 25/86 (29%), Positives = 51/86 (59%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYEQSKFA----RMEAEIKRLQTEMTEQLKDYRELME 262
E+ +R L + ++E++ ++ S + ++E E++ + EM L++Y++L+
Sbjct: 330 ELESVRGTKESLERQLSDIEERHNHDLSSYQDTIQQLENELRGTKWEMARHLREYQDLLN 389
Query: 263 IKINLDVEIAQYRNLMEAEESSLPTY 288
+K+ LD+EIA YR L+E EE+ T+
Sbjct: 390 VKMALDIEIAAYRKLLEGEETRFSTF 415
>UNIPROTKB|Q8HZR5 [details] [associations]
symbol:KRT7 "Keratin, type II cytoskeletal 7" species:9310
"Potorous tridactylus" [GO:0006417 "regulation of translation"
evidence=ISS] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
GO:GO:0006417 GO:GO:0005198 GO:GO:0006260 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 HSSP:P03069 GO:GO:0045095
PANTHER:PTHR23239:SF18 GO:GO:0051325 EMBL:AF509889
ProteinModelPortal:Q8HZR5 PRIDE:Q8HZR5 Uniprot:Q8HZR5
Length = 483
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIK 264
D N+ + E + E ++ ++K +EA ++R + E Q+++Y++L+ +K
Sbjct: 340 DNVKNQRTKLEASIAEAEERGELALKDARAKQEELEAALQRSKQERARQVREYQDLLNVK 399
Query: 265 INLDVEIAQYRNLMEAEESSL 285
+ LD+EIA YR L+E EES L
Sbjct: 400 LALDIEIATYRKLLEGEESRL 420
>UNIPROTKB|F6UNP7 [details] [associations]
symbol:NEFM "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 InterPro:IPR006821
Pfam:PF04732 PRINTS:PR01248 GO:GO:0005198 GO:GO:0005882
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GeneTree:ENSGT00560000076873 CTD:4741
KO:K04573 OMA:GPGGDYK Ensembl:ENSCAFT00000014336 EMBL:AAEX03014355
RefSeq:XP_543237.2 GeneID:486111 KEGG:cfa:486111 Uniprot:F6UNP7
Length = 862
Score = 130 (50.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 25/86 (29%), Positives = 51/86 (59%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYEQSKFA----RMEAEIKRLQTEMTEQLKDYRELME 262
E+ +R L + ++E++ ++ S + ++E E++ + EM L++Y++L+
Sbjct: 330 ELESVRGTKESLERQLSDIEERHNHDLSSYQDTIQQLENELRGTKWEMARHLREYQDLLN 389
Query: 263 IKINLDVEIAQYRNLMEAEESSLPTY 288
+K+ LD+EIA YR L+E EE+ T+
Sbjct: 390 VKMALDIEIAAYRKLLEGEETRFSTF 415
>UNIPROTKB|E7ESP9 [details] [associations]
symbol:NEFM "Neurofilament medium polypeptide" species:9606
"Homo sapiens" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001664
InterPro:IPR002957 InterPro:IPR006821 Pfam:PF04732 PRINTS:PR01248
GO:GO:0005737 GO:GO:0005198 GO:GO:0005882 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
EMBL:AF106564 HGNC:HGNC:7734 ChiTaRS:NEFM IPI:IPI00853115
ProteinModelPortal:E7ESP9 SMR:E7ESP9 Ensembl:ENST00000437366
ArrayExpress:E7ESP9 Bgee:E7ESP9 Uniprot:E7ESP9
Length = 877
Score = 130 (50.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 25/86 (29%), Positives = 51/86 (59%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYEQSKFA----RMEAEIKRLQTEMTEQLKDYRELME 262
E+ +R L + ++E++ ++ S + ++E E++ + EM L++Y++L+
Sbjct: 330 ELESVRGTKESLERQLSDIEERHNHDLSSYQDTIQQLENELRGTKWEMARHLREYQDLLN 389
Query: 263 IKINLDVEIAQYRNLMEAEESSLPTY 288
+K+ LD+EIA YR L+E EE+ T+
Sbjct: 390 VKMALDIEIAAYRKLLEGEETRFSTF 415
>UNIPROTKB|P07197 [details] [associations]
symbol:NEFM "Neurofilament medium polypeptide" species:9606
"Homo sapiens" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0005883 "neurofilament" evidence=IEA] [GO:0008088
"axon cargo transport" evidence=IEA] [GO:0031133 "regulation of
axon diameter" evidence=IEA] [GO:0031594 "neuromuscular junction"
evidence=IEA] [GO:0045110 "intermediate filament bundle assembly"
evidence=IEA] [GO:0060052 "neurofilament cytoskeleton organization"
evidence=IEA] [GO:0030424 "axon" evidence=TAS] [GO:0005200
"structural constituent of cytoskeleton" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001664 InterPro:IPR002957
InterPro:IPR006821 Pfam:PF04732 PRINTS:PR01248 GO:GO:0005737
GO:GO:0000226 EMBL:CH471080 GO:GO:0005200 GO:GO:0031594
GO:GO:0008088 HOGENOM:HOG000230977 HOVERGEN:HBG013015 GO:GO:0005883
GO:GO:0060052 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0031133
GO:GO:0045110 OrthoDB:EOG4VMFFD CTD:4741 eggNOG:NOG151229 KO:K04573
EMBL:Y00067 EMBL:EF560736 EMBL:AF106564 EMBL:BC096757
IPI:IPI00217507 PIR:A27864 RefSeq:NP_005373.2 UniGene:Hs.458657
UniGene:Hs.730072 ProteinModelPortal:P07197 SMR:P07197
IntAct:P07197 STRING:P07197 PhosphoSite:P07197 DMDM:281185500
UCD-2DPAGE:P07197 PaxDb:P07197 PRIDE:P07197 DNASU:4741
Ensembl:ENST00000221166 GeneID:4741 KEGG:hsa:4741 UCSC:uc003xed.4
GeneCards:GC08P024770 H-InvDB:HIX0034266 H-InvDB:HIX0034491
HGNC:HGNC:7734 HPA:CAB010900 HPA:CAB012976 HPA:HPA022845
HPA:HPA023138 MIM:162250 neXtProt:NX_P07197 PharmGKB:PA162397442
InParanoid:P07197 OMA:GPGGDYK PhylomeDB:P07197 ChiTaRS:NEFM
GenomeRNAi:4741 NextBio:18284 ArrayExpress:P07197 Bgee:P07197
CleanEx:HS_NEFM Genevestigator:P07197 GermOnline:ENSG00000104722
Uniprot:P07197
Length = 916
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 25/86 (29%), Positives = 51/86 (59%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYEQSKFA----RMEAEIKRLQTEMTEQLKDYRELME 262
E+ +R L + ++E++ ++ S + ++E E++ + EM L++Y++L+
Sbjct: 330 ELESVRGTKESLERQLSDIEERHNHDLSSYQDTIQQLENELRGTKWEMARHLREYQDLLN 389
Query: 263 IKINLDVEIAQYRNLMEAEESSLPTY 288
+K+ LD+EIA YR L+E EE+ T+
Sbjct: 390 VKMALDIEIAAYRKLLEGEETRFSTF 415
>UNIPROTKB|F1RJU6 [details] [associations]
symbol:NEFM "Neurofilament medium polypeptide" species:9823
"Sus scrofa" [GO:0060052 "neurofilament cytoskeleton organization"
evidence=IEA] [GO:0045110 "intermediate filament bundle assembly"
evidence=IEA] [GO:0031594 "neuromuscular junction" evidence=IEA]
[GO:0031133 "regulation of axon diameter" evidence=IEA] [GO:0008088
"axon cargo transport" evidence=IEA] [GO:0005883 "neurofilament"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000226
"microtubule cytoskeleton organization" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR001664
InterPro:IPR002957 InterPro:IPR006821 Pfam:PF04732 PRINTS:PR01248
GO:GO:0000226 GO:GO:0005198 GO:GO:0031594 GO:GO:0008088
GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0031133
GeneTree:ENSGT00560000076873 GO:GO:0045110 OMA:GPGGDYK
EMBL:CT978650 Ensembl:ENSSSCT00000010576 Uniprot:F1RJU6
Length = 934
Score = 130 (50.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 25/86 (29%), Positives = 51/86 (59%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYEQSKFA----RMEAEIKRLQTEMTEQLKDYRELME 262
E+ +R L + ++E++ ++ S + ++E E++ + EM L++Y++L+
Sbjct: 330 ELESVRGTKESLERQLSDIEERHNHDLSSYQDTIQQLENELRGTKWEMARHLREYQDLLN 389
Query: 263 IKINLDVEIAQYRNLMEAEESSLPTY 288
+K+ LD+EIA YR L+E EE+ T+
Sbjct: 390 VKMALDIEIAAYRKLLEGEETRFSTF 415
>UNIPROTKB|H9KZ26 [details] [associations]
symbol:KRT75 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0045095 "keratin filament" evidence=IEA] InterPro:IPR001664
InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
InterPro:IPR009053 SUPFAM:SSF46579 GO:GO:0045095
PANTHER:PTHR23239:SF18 GeneTree:ENSGT00610000085801
EMBL:AADN02076543 EMBL:AADN02076544 EMBL:AADN02076545
Ensembl:ENSGALT00000003702 Uniprot:H9KZ26
Length = 529
Score = 127 (49.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+ K A +E +++ + ++ QL++Y+ELM +K+ LD+EIA YR L+E EE L
Sbjct: 398 RDKLAELETALQQAKADLARQLREYQELMNVKLALDIEIATYRKLLEGEECRL 450
>UNIPROTKB|F1PTX4 [details] [associations]
symbol:KRT2 "Keratin, type II cytoskeletal 2 epidermal"
species:9615 "Canis lupus familiaris" [GO:0051546 "keratinocyte
migration" evidence=IEA] [GO:0043616 "keratinocyte proliferation"
evidence=IEA] [GO:0032980 "keratinocyte activation" evidence=IEA]
[GO:0031424 "keratinization" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0045095 "keratin filament"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
GO:GO:0005794 GO:GO:0043616 GO:GO:0005198 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045095 GO:GO:0031424 GO:GO:0051546 PANTHER:PTHR23239:SF18
OMA:IFQAYIG GO:GO:0032980 GeneTree:ENSGT00610000085977
EMBL:AAEX03015006 Ensembl:ENSCAFT00000011579 Uniprot:F1PTX4
Length = 635
Score = 128 (50.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 24/73 (32%), Positives = 45/73 (61%)
Query: 210 ELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDV 269
+ ++ + E ++ E ++ Q K + +E +++ + ++ L+DY+ELM +K+ LDV
Sbjct: 430 QCKSVQEAIAEAEQKGEHAVKDAQGKLSDLEEALQQAREDLARLLRDYQELMNVKLALDV 489
Query: 270 EIAQYRNLMEAEE 282
EIA YR L+E EE
Sbjct: 490 EIATYRKLLEGEE 502
>ZFIN|ZDB-GENE-060316-3 [details] [associations]
symbol:krt1-c5 "keratin, type 1, gene c5"
species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005882 "intermediate filament"
evidence=IEA] InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248
ZFIN:ZDB-GENE-060316-3 GO:GO:0005198 GO:GO:0005882
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 HOGENOM:HOG000230975
GeneTree:ENSGT00560000076905 EMBL:BX255921 IPI:IPI00805585
UniGene:Dr.91561 Ensembl:ENSDART00000139066 eggNOG:NOG146588
OrthoDB:EOG4VDQ1C Uniprot:A2BF93
Length = 431
Score = 119 (46.9 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIK 264
D+ ++ L E N++ ++E QS ++E E+ +L+ +M DY +L+ IK
Sbjct: 304 DSLRKQIGVLEGNLEETNQKYTLEMERLQSSLTQLEDELSQLRLDMQRIKTDYEQLLRIK 363
Query: 265 INLDVEIAQYRNLMEAEE 282
NL++EIA YR L++ E+
Sbjct: 364 QNLELEIATYRRLLDGED 381
Score = 45 (20.9 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 23/91 (25%), Positives = 42/91 (46%)
Query: 36 TPSRGSVAPSKKRKLNILEEYESEERTSSGFQVTSSAKGNMEITEVD-PD-G-------- 85
T RG + S K +L L++ EE+ + ++ S+ + N+E+ PD G
Sbjct: 190 TTLRGDL-DSLKEELYFLKKNHEEEKNALKSRL-SNEQVNVEVDAAQGPDLGAVMAELRV 247
Query: 86 KFVKLYNKGSEEQSLGNWQLVRKVQGEVKTS 116
++ + K E+ + + + VQ EVK S
Sbjct: 248 QYENIARKNKEDAEIWYLKKLEAVQSEVKES 278
>UNIPROTKB|F1MUY2 [details] [associations]
symbol:KRT6C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045095 "keratin filament" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR001664
InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045095 PANTHER:PTHR23239:SF18 KO:K07605
GeneTree:ENSGT00610000085801 IPI:IPI00840655 UniGene:Bt.91778
UniGene:Bt.99723 CTD:3854 OMA:QLDNIVG EMBL:DAAA02012886
RefSeq:NP_001244333.1 ProteinModelPortal:F1MUY2 PRIDE:F1MUY2
Ensembl:ENSBTAT00000046815 GeneID:404115 KEGG:bta:404115
NextBio:20817555 ArrayExpress:F1MUY2 Uniprot:F1MUY2
Length = 571
Score = 127 (49.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+SK A +E +++ + +M LK+Y+ELM +K+ LDVEIA YR L+E EE L
Sbjct: 424 RSKLADLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYRKLLEGEECRL 476
>RGD|3160 [details] [associations]
symbol:Nefm "neurofilament, medium polypeptide" species:10116
"Rattus norvegicus" [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IDA] [GO:0005882 "intermediate
filament" evidence=IEA] [GO:0005883 "neurofilament" evidence=ISO]
[GO:0008088 "axon cargo transport" evidence=ISO] [GO:0030424 "axon"
evidence=ISO;IDA] [GO:0031133 "regulation of axon diameter"
evidence=ISO] [GO:0031594 "neuromuscular junction" evidence=ISO]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0045104
"intermediate filament cytoskeleton organization" evidence=ISO]
[GO:0045110 "intermediate filament bundle assembly" evidence=ISO]
[GO:0060052 "neurofilament cytoskeleton organization" evidence=ISO]
InterPro:IPR001664 InterPro:IPR002957 InterPro:IPR006821 Pfam:PF04732
PRINTS:PR01248 RGD:3160 GO:GO:0000226 GO:GO:0005856 GO:GO:0005198
GO:GO:0030424 GO:GO:0031594 GO:GO:0008088 HOGENOM:HOG000230977
HOVERGEN:HBG013015 GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0031133 GO:GO:0045110 eggNOG:NOG264891 OrthoDB:EOG4VMFFD
CTD:4741 KO:K04573 EMBL:M18628 EMBL:Z12152 IPI:IPI00325609 PIR:A45669
RefSeq:NP_058725.1 UniGene:Rn.10971 ProteinModelPortal:P12839
SMR:P12839 DIP:DIP-208N STRING:P12839 GlycoSuiteDB:P12839
PhosphoSite:P12839 World-2DPAGE:0004:P12839 PRIDE:P12839 GeneID:24588
KEGG:rno:24588 UCSC:RGD:3160 InParanoid:P12839 NextBio:603770
Genevestigator:P12839 GermOnline:ENSRNOG00000013916 Uniprot:P12839
Length = 846
Score = 130 (50.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 25/86 (29%), Positives = 51/86 (59%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYEQSKFA----RMEAEIKRLQTEMTEQLKDYRELME 262
E+ +R L + ++E++ ++ S + ++E E++ + EM L++Y++L+
Sbjct: 329 ELESVRGTKESLERQLSDIEERHNHDLSSYQDTIQQLENELRGTKWEMARHLREYQDLLN 388
Query: 263 IKINLDVEIAQYRNLMEAEESSLPTY 288
+K+ LD+EIA YR L+E EE+ T+
Sbjct: 389 VKMALDIEIAAYRKLLEGEETRFSTF 414
Score = 40 (19.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 99 SLGNWQLVRKVQGEVKTSF 117
SLGN R+V E ++SF
Sbjct: 7 SLGNPSAYRRVPTETRSSF 25
>UNIPROTKB|P12839 [details] [associations]
symbol:Nefm "Neurofilament medium polypeptide"
species:10116 "Rattus norvegicus" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005882 "intermediate filament"
evidence=IEA] InterPro:IPR001664 InterPro:IPR002957
InterPro:IPR006821 Pfam:PF04732 PRINTS:PR01248 RGD:3160
GO:GO:0000226 GO:GO:0005856 GO:GO:0005198 GO:GO:0030424
GO:GO:0031594 GO:GO:0008088 HOGENOM:HOG000230977 HOVERGEN:HBG013015
GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0031133
GO:GO:0045110 eggNOG:NOG264891 OrthoDB:EOG4VMFFD CTD:4741 KO:K04573
EMBL:M18628 EMBL:Z12152 IPI:IPI00325609 PIR:A45669
RefSeq:NP_058725.1 UniGene:Rn.10971 ProteinModelPortal:P12839
SMR:P12839 DIP:DIP-208N STRING:P12839 GlycoSuiteDB:P12839
PhosphoSite:P12839 World-2DPAGE:0004:P12839 PRIDE:P12839
GeneID:24588 KEGG:rno:24588 UCSC:RGD:3160 InParanoid:P12839
NextBio:603770 Genevestigator:P12839 GermOnline:ENSRNOG00000013916
Uniprot:P12839
Length = 846
Score = 130 (50.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 25/86 (29%), Positives = 51/86 (59%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYEQSKFA----RMEAEIKRLQTEMTEQLKDYRELME 262
E+ +R L + ++E++ ++ S + ++E E++ + EM L++Y++L+
Sbjct: 329 ELESVRGTKESLERQLSDIEERHNHDLSSYQDTIQQLENELRGTKWEMARHLREYQDLLN 388
Query: 263 IKINLDVEIAQYRNLMEAEESSLPTY 288
+K+ LD+EIA YR L+E EE+ T+
Sbjct: 389 VKMALDIEIAAYRKLLEGEETRFSTF 414
Score = 40 (19.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 99 SLGNWQLVRKVQGEVKTSF 117
SLGN R+V E ++SF
Sbjct: 7 SLGNPSAYRRVPTETRSSF 25
>MGI|MGI:1924305 [details] [associations]
symbol:Krt76 "keratin 76" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0005882
"intermediate filament" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0045095 "keratin filament"
evidence=IEA] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
MGI:MGI:1924305 GO:GO:0005198 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045095 HOGENOM:HOG000230976 PANTHER:PTHR23239:SF18 KO:K07605
CTD:51350 eggNOG:NOG146968 OrthoDB:EOG40ZQXX EMBL:AK137676
IPI:IPI00346834 RefSeq:NP_001028349.1 UniGene:Mm.195788
ProteinModelPortal:Q3UV17 SMR:Q3UV17 PhosphoSite:Q3UV17
PaxDb:Q3UV17 PRIDE:Q3UV17 Ensembl:ENSMUST00000100179 GeneID:77055
KEGG:mmu:77055 UCSC:uc007xue.1 GeneTree:ENSGT00610000085801
InParanoid:Q3UV17 OMA:EIMELNM NextBio:346392 Bgee:Q3UV17
Genevestigator:Q3UV17 Uniprot:Q3UV17
Length = 594
Score = 127 (49.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+ E + E ++ +KF ++ +++ + +M LK+Y+ELM +K+ LDVEIA YR L
Sbjct: 413 IAEAEQRGERALKDADTKFQDLQVALQKAKEDMARLLKEYQELMNVKLALDVEIATYRKL 472
Query: 278 MEAEESSL 285
+E EE L
Sbjct: 473 LEGEECRL 480
>UNIPROTKB|H9L3R9 [details] [associations]
symbol:KRT80 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0045095 "keratin filament" evidence=IEA] InterPro:IPR001664
InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198 InterPro:IPR016044
PANTHER:PTHR23239 Pfam:PF00038 GO:GO:0045095 PANTHER:PTHR23239:SF18
GeneTree:ENSGT00690000102295 OMA:NQEKEEM EMBL:AADN02076558
EMBL:AADN02076559 EMBL:AADN02076560 EMBL:AADN02076561
EMBL:AADN02076562 Ensembl:ENSGALT00000041259 Uniprot:H9L3R9
Length = 371
Score = 123 (48.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 24/68 (35%), Positives = 44/68 (64%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+ E + E ++ ++K ++E +++ + +M +K+Y+ELM IK+ LD+EI YR L
Sbjct: 276 IKEAGEHGEMALKDAKAKLVKLEEALQKSKEDMAHLVKEYQELMNIKLALDLEILTYRKL 335
Query: 278 MEAEESSL 285
+E EESS+
Sbjct: 336 VEGEESSM 343
Score = 38 (18.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 51 NILEEYESEERTSSGFQVT 69
N +YE E R SG + T
Sbjct: 113 NFRSKYEDEIRLCSGMEYT 131
>UNIPROTKB|F5H8K9 [details] [associations]
symbol:KRT4 "Keratin, type II cytoskeletal 4" species:9606
"Homo sapiens" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0045095 "keratin filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095 PANTHER:PTHR23239:SF18
EMBL:AC107016 IPI:IPI00797452 HGNC:HGNC:6441 ChiTaRS:KRT4
ProteinModelPortal:F5H8K9 SMR:F5H8K9 PRIDE:F5H8K9
Ensembl:ENST00000458244 ArrayExpress:F5H8K9 Bgee:F5H8K9
Uniprot:F5H8K9
Length = 500
Score = 126 (49.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 23/57 (40%), Positives = 39/57 (68%)
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
E+ ++ SK +EA +++ + E+ L++Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 371 ENALKDAHSKRVELEAALQQAKEELARMLREYQELMSVKLALDIEIATYRKLLEGEE 427
>UNIPROTKB|P19013 [details] [associations]
symbol:KRT4 "Keratin, type II cytoskeletal 4" species:9606
"Homo sapiens" [GO:0045095 "keratin filament" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=NAS] [GO:0007010
"cytoskeleton organization" evidence=NAS] [GO:0005198 "structural
molecule activity" evidence=NAS] [GO:0030855 "epithelial cell
differentiation" evidence=ISS] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=ISS] InterPro:IPR001664
InterPro:IPR003054 PRINTS:PR01276 GO:GO:0007010 GO:GO:0005198
GO:GO:0005882 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0050680 GO:GO:0030855 GO:GO:0045095 HOGENOM:HOG000230976
PANTHER:PTHR23239:SF18 MIM:193900 Orphanet:171723 EMBL:AC107016
EMBL:AY043326 EMBL:BC003630 EMBL:BC042174 EMBL:X67683 EMBL:X07695
EMBL:X61028 IPI:IPI00797452 PIR:I37942 UniGene:Hs.654610
UniGene:Hs.731814 ProteinModelPortal:P19013 SMR:P19013
IntAct:P19013 STRING:P19013 PhosphoSite:P19013 DMDM:82654947
PaxDb:P19013 PRIDE:P19013 Ensembl:ENST00000293774
Ensembl:ENST00000551956 GeneCards:GC12M053200 H-InvDB:HIX0010659
HGNC:HGNC:6441 HPA:CAB002154 MIM:123940 neXtProt:NX_P19013
PharmGKB:PA30229 eggNOG:NOG148747 InParanoid:P19013
OrthoDB:EOG46HG9P ChiTaRS:KRT4 NextBio:15153 ArrayExpress:P19013
Bgee:P19013 CleanEx:HS_KRT4 Genevestigator:P19013
GermOnline:ENSG00000170477 Uniprot:P19013
Length = 534
Score = 126 (49.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 23/57 (40%), Positives = 39/57 (68%)
Query: 226 EDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEE 282
E+ ++ SK +EA +++ + E+ L++Y+ELM +K+ LD+EIA YR L+E EE
Sbjct: 405 ENALKDAHSKRVELEAALQQAKEELARMLREYQELMSVKLALDIEIATYRKLLEGEE 461
>RGD|1303316 [details] [associations]
symbol:Krt81 "keratin 81" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
RGD:1303316 GO:GO:0005198 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045095 HOGENOM:HOG000230976 PANTHER:PTHR23239:SF18 KO:K07605
CTD:3887 EMBL:BK003974 IPI:IPI00421787 RefSeq:NP_001008814.1
UniGene:Rn.162019 ProteinModelPortal:Q6IG11 SMR:Q6IG11
STRING:Q6IG11 PRIDE:Q6IG11 GeneID:407761 KEGG:rno:407761
UCSC:RGD:1303316 InParanoid:Q6IG11 NextBio:696169
Genevestigator:Q6IG11 Uniprot:Q6IG11
Length = 541
Score = 126 (49.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 25/68 (36%), Positives = 44/68 (64%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+T+ ++ E + + K A +EA +++ + +M LK+Y+E+M K+ LD+EIA YR+L
Sbjct: 350 VTQSEQQGEAALTDARCKLAELEAALQKAKQDMACLLKEYQEVMNSKLGLDIEIATYRHL 409
Query: 278 MEAEESSL 285
+E EE L
Sbjct: 410 LEGEEQRL 417
>UNIPROTKB|L7N095 [details] [associations]
symbol:KRT5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045095 "keratin filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
GeneTree:ENSGT00610000085801 EMBL:AAEX03015007
Ensembl:ENSCAFT00000011636 Uniprot:L7N095
Length = 571
Score = 126 (49.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 24/53 (45%), Positives = 37/53 (69%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++K A +E +++ + +M LK+Y+ELM +K+ LDVEIA YR L+E EE L
Sbjct: 425 KNKLAELEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYRKLLEGEECRL 477
>UNIPROTKB|E9PT97 [details] [associations]
symbol:Krt86 "Protein Krt86" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0045095 "keratin filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 RGD:1303215
GO:GO:0005198 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095
PANTHER:PTHR23239:SF18 GeneTree:ENSGT00670000097789 IPI:IPI00951124
Ensembl:ENSRNOT00000067422 ArrayExpress:E9PT97 Uniprot:E9PT97
Length = 488
Score = 125 (49.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 25/68 (36%), Positives = 43/68 (63%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+T+ ++ E + + K A +EA +++ + +M LK+Y+E+M K+ LD+EIA YR L
Sbjct: 352 VTQSEQQGEAALTDARCKLAELEAALQKAKQDMACLLKEYQEVMNSKLGLDIEIATYRRL 411
Query: 278 MEAEESSL 285
+E EE L
Sbjct: 412 LEGEEQRL 419
>UNIPROTKB|A6QP32 [details] [associations]
symbol:KRT85 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045095 "keratin filament" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR001664
InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095 HOGENOM:HOG000230976
PANTHER:PTHR23239:SF18 KO:K07605 GeneTree:ENSGT00670000097789
CTD:3891 EMBL:DAAA02012886 EMBL:BC149126 IPI:IPI00687048
RefSeq:NP_001094581.1 UniGene:Bt.54561 SMR:A6QP32
Ensembl:ENSBTAT00000038471 GeneID:523073 KEGG:bta:523073
eggNOG:NOG293322 InParanoid:A6QP32 OMA:IDSAYLR OrthoDB:EOG4M0F1S
NextBio:20873662 Uniprot:A6QP32
Length = 493
Score = 125 (49.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
L E ++ E + + K A +E +++ + +M LK+Y+E+M K+ LDVEIA YR L
Sbjct: 367 LAEAEQQGEAALNDAKCKLAGLEEALQKAKQDMACLLKEYQEVMNSKLGLDVEIATYRKL 426
Query: 278 MEAEESSL 285
+E EES L
Sbjct: 427 LEGEESRL 434
>UNIPROTKB|H9KZP7 [details] [associations]
symbol:KRT80 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0045095 "keratin filament" evidence=IEA] InterPro:IPR001664
InterPro:IPR003054 GO:GO:0005198 InterPro:IPR016044
PANTHER:PTHR23239 Pfam:PF00038 GO:GO:0045095 PANTHER:PTHR23239:SF18
GeneTree:ENSGT00690000102295 EMBL:AADN02076558 EMBL:AADN02076559
EMBL:AADN02076560 EMBL:AADN02076561 EMBL:AADN02076562
Ensembl:ENSGALT00000016672 Uniprot:H9KZP7
Length = 407
Score = 123 (48.4 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 24/68 (35%), Positives = 44/68 (64%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+ E + E ++ ++K ++E +++ + +M +K+Y+ELM IK+ LD+EI YR L
Sbjct: 324 IKEAGEHGEMALKDAKAKLVKLEEALQKSKEDMAHLVKEYQELMNIKLALDLEILTYRKL 383
Query: 278 MEAEESSL 285
+E EESS+
Sbjct: 384 VEGEESSM 391
Score = 38 (18.4 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 51 NILEEYESEERTSSGFQVT 69
N +YE E R SG + T
Sbjct: 67 NFRSKYEDEIRLCSGMEYT 85
>RGD|1303215 [details] [associations]
symbol:Krt86 "keratin 86" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
RGD:1303215 GO:GO:0005198 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045095 HOGENOM:HOG000230976 PANTHER:PTHR23239:SF18 KO:K07605
UniGene:Rn.7913 OrthoDB:EOG4B2SX3 CTD:3892 EMBL:BK003975
IPI:IPI00454477 RefSeq:NP_001008810.1 ProteinModelPortal:Q6IG10
SMR:Q6IG10 STRING:Q6IG10 PRIDE:Q6IG10 GeneID:407760 KEGG:rno:407760
UCSC:RGD:1303215 InParanoid:Q6IG10 NextBio:696165
Genevestigator:Q6IG10 Uniprot:Q6IG10
Length = 517
Score = 125 (49.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 25/68 (36%), Positives = 43/68 (63%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+T+ ++ E + + K A +EA +++ + +M LK+Y+E+M K+ LD+EIA YR L
Sbjct: 350 VTQSEQQGEAALTDARCKLAELEAALQKAKQDMACLLKEYQEVMNSKLGLDIEIATYRRL 409
Query: 278 MEAEESSL 285
+E EE L
Sbjct: 410 LEGEEQRL 417
>ZFIN|ZDB-GENE-030411-5 [details] [associations]
symbol:krt8 "keratin 8" species:7955 "Danio rerio"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0045095 "keratin filament" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;ISS] [GO:0005882 "intermediate filament"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
ZFIN:ZDB-GENE-030411-5 GO:GO:0005737 GO:GO:0005654 GO:GO:0005198
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0016363
GO:GO:0045095 HOGENOM:HOG000230976 eggNOG:NOG146769 KO:K07605
GeneTree:ENSGT00670000097847 CTD:3856 OrthoDB:EOG4XKV78
EMBL:AY423000 EMBL:BC067610 EMBL:AJ460000 IPI:IPI00486027
RefSeq:NP_956374.1 UniGene:Dr.75900 ProteinModelPortal:Q6NWF6
SMR:Q6NWF6 STRING:Q6NWF6 PRIDE:Q6NWF6 Ensembl:ENSDART00000081215
GeneID:797433 KEGG:dre:797433 InParanoid:Q6NWF6 OMA:INISQQS
NextBio:20933013 ArrayExpress:Q6NWF6 Bgee:Q6NWF6 Uniprot:Q6NWF6
Length = 520
Score = 125 (49.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 23/71 (32%), Positives = 43/71 (60%)
Query: 217 RLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRN 276
++ E + E + + + +E ++R + +M Q+++Y++LM +K+ LD+EIA YR
Sbjct: 358 QIAEAEERGEMAVRDAKGRIKDLEDALQRAKQDMARQIREYQDLMNVKLALDIEIATYRK 417
Query: 277 LMEAEESSLPT 287
L+E EE L T
Sbjct: 418 LLEGEEDRLAT 428
>UNIPROTKB|Q6EIZ1 [details] [associations]
symbol:KRT2 "Keratin, type II cytoskeletal 2 epidermal"
species:9615 "Canis lupus familiaris" [GO:0045095 "keratin
filament" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
GO:GO:0005198 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045095 HSSP:P08670 HOGENOM:HOG000230976
PANTHER:PTHR23239:SF18 EMBL:AY318943 RefSeq:NP_001003386.1
UniGene:Cfa.10760 ProteinModelPortal:Q6EIZ1 SMR:Q6EIZ1 PRIDE:Q6EIZ1
GeneID:444850 KEGG:cfa:444850 CTD:3849 eggNOG:NOG146769 KO:K07605
NextBio:20831743 Uniprot:Q6EIZ1
Length = 633
Score = 126 (49.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 24/73 (32%), Positives = 45/73 (61%)
Query: 210 ELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDV 269
+ ++ + E ++ E ++ Q K + +E +++ + ++ L+DY+ELM +K+ LDV
Sbjct: 428 QCKSVQEAIAEAEQKGEHAVKDAQGKLSDLEEALQQAREDLAGLLRDYQELMNVKLALDV 487
Query: 270 EIAQYRNLMEAEE 282
EIA YR L+E EE
Sbjct: 488 EIATYRKLLEGEE 500
>UNIPROTKB|P08552 [details] [associations]
symbol:NEFM "Neurofilament medium polypeptide" species:9823
"Sus scrofa" [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 InterPro:IPR006821
Pfam:PF04732 PRINTS:PR01248 GO:GO:0005198 GO:GO:0005882
HOGENOM:HOG000230977 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
eggNOG:NOG264891 PIR:A05075 ProteinModelPortal:P08552 SMR:P08552
STRING:P08552 Uniprot:P08552
Length = 455
Score = 124 (48.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 24/81 (29%), Positives = 49/81 (60%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYEQSKFA----RMEAEIKRLQTEMTEQLKDYRELME 262
E+ +R L + ++E++ ++ S + ++E E++ + EM L++Y++L+
Sbjct: 331 ELESVRGTKESLERQLSDIEERHNHDLSSYQDTIQQLENELRGTKWEMARHLREYQDLLN 390
Query: 263 IKINLDVEIAQYRNLMEAEES 283
+K+ LD+EIA YR L+E EE+
Sbjct: 391 VKMALDIEIAAYRKLLEGEET 411
>RGD|1303024 [details] [associations]
symbol:Kb23 "type II keratin Kb23" species:10116 "Rattus
norvegicus" [GO:0005200 "structural constituent of cytoskeleton"
evidence=TAS] [GO:0005882 "intermediate filament" evidence=TAS]
[GO:0045095 "keratin filament" evidence=TAS] [GO:0045103
"intermediate filament-based process" evidence=TAS]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 RGD:1303024
GO:GO:0005200 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045095 PANTHER:PTHR23239:SF18 GO:GO:0045103 KO:K07605
EMBL:BK003977 IPI:IPI00454476 RefSeq:NP_001008813.1
UniGene:Rn.154793 ProteinModelPortal:Q6IG08 SMR:Q6IG08
STRING:Q6IG08 GeneID:407759 KEGG:rno:407759 UCSC:RGD:1303024
CTD:407759 NextBio:696162 Genevestigator:Q6IG08 Uniprot:Q6IG08
Length = 555
Score = 125 (49.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 25/68 (36%), Positives = 43/68 (63%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+T+ ++ E + + K A +EA +++ + +M LK+Y+E+M K+ LD+EIA YR L
Sbjct: 348 VTQSEQQGEAALTDARCKLAELEAALQKAKQDMACLLKEYQEVMNSKLGLDIEIATYRRL 407
Query: 278 MEAEESSL 285
+E EE L
Sbjct: 408 LEGEEQRL 415
>RGD|1303078 [details] [associations]
symbol:Krt76 "keratin 76" species:10116 "Rattus norvegicus"
[GO:0005200 "structural constituent of cytoskeleton" evidence=TAS]
[GO:0005882 "intermediate filament" evidence=TAS] [GO:0045095
"keratin filament" evidence=TAS] [GO:0045103 "intermediate
filament-based process" evidence=TAS] [GO:0045111 "intermediate
filament cytoskeleton" evidence=ISO] InterPro:IPR001664
InterPro:IPR003054 PRINTS:PR01276 RGD:1303078 GO:GO:0005200
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095
HOGENOM:HOG000230976 PANTHER:PTHR23239:SF18 GO:GO:0045103 KO:K07605
CTD:51350 eggNOG:NOG146968 OMA:PNNLEPF OrthoDB:EOG40ZQXX
GeneTree:ENSGT00610000085801 EMBL:BK003994 IPI:IPI00421812
RefSeq:NP_001008805.1 UniGene:Rn.120206 SMR:Q6IFZ5 STRING:Q6IFZ5
Ensembl:ENSRNOT00000048613 GeneID:407757 KEGG:rno:407757
UCSC:RGD:1303078 InParanoid:Q6IFZ5 NextBio:696155
Genevestigator:Q6IFZ5 Uniprot:Q6IFZ5
Length = 581
Score = 125 (49.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+ E + E ++ +KF ++A +++ + ++ L++Y+ELM +K+ LDVEIA YR L
Sbjct: 407 IAEAEQRGERALKDADAKFQDLQAALQKAKEDLARLLREYQELMNVKLALDVEIATYRKL 466
Query: 278 MEAEESSL 285
+E EE L
Sbjct: 467 LEGEECRL 474
>UNIPROTKB|H9KZP3 [details] [associations]
symbol:LOC768881 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0045095 "keratin filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198
InterPro:IPR016044 PANTHER:PTHR23239 Pfam:PF00038 GO:GO:0045095
PANTHER:PTHR23239:SF18 GeneTree:ENSGT00610000085801
EMBL:AADN02076528 Ensembl:ENSGALT00000016654 OMA:EEMQTIS
Uniprot:H9KZP3
Length = 626
Score = 125 (49.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 207 EMNELRAANYRLTERNKELEDQIEYE----QSKFARMEAEIKRLQTEMTEQLKDYRELME 262
E+ ++ N +L E E++ E + K +EA + + + E+ LK+Y+EL+
Sbjct: 414 EIENVKKQNQQLQAAIAEAEERGEMALKDARVKLEELEAALSKDKEELARLLKEYQELLN 473
Query: 263 IKINLDVEIAQYRNLMEAEES 283
+KI LDVEIA YR L+E EE+
Sbjct: 474 VKIALDVEIAMYRKLLEGEEN 494
>UNIPROTKB|Q29426 [details] [associations]
symbol:KRT3 "Keratin, type II cytoskeletal 3" species:9986
"Oryctolagus cuniculus" [GO:0005198 "structural molecule activity"
evidence=ISS] [GO:0030855 "epithelial cell differentiation"
evidence=IDA] [GO:0045104 "intermediate filament cytoskeleton
organization" evidence=ISS] InterPro:IPR001664 InterPro:IPR003054
PRINTS:PR01276 GO:GO:0005198 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045104 GO:GO:0030855 GO:GO:0045095 HOGENOM:HOG000230976
PANTHER:PTHR23239:SF18 eggNOG:NOG146968 OrthoDB:EOG40ZQXX CTD:3850
EMBL:S65740 EMBL:X74371 PIR:S42629 RefSeq:XP_002711051.1
UniGene:Ocu.3451 ProteinModelPortal:Q29426 SMR:Q29426 PRIDE:Q29426
GeneID:100353668 Uniprot:Q29426
Length = 629
Score = 125 (49.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+ E + E ++ +K ++A +++ + ++ L+DY+ELM +K+ LDVEIA YR L
Sbjct: 431 IAEAEQRGELALKDANAKLQELQAALQQAKDDLARLLRDYQELMNVKLALDVEIATYRKL 490
Query: 278 MEAEESSL 285
+E EES +
Sbjct: 491 LEGEESRM 498
>UNIPROTKB|F1MKE7 [details] [associations]
symbol:F1MKE7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045095 "keratin filament" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR001664
InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045095 PANTHER:PTHR23239:SF18 GeneTree:ENSGT00610000085801
EMBL:DAAA02012886 IPI:IPI00731867 Ensembl:ENSBTAT00000057443
OMA:YEDEINF ArrayExpress:F1MKE7 Uniprot:F1MKE7
Length = 534
Score = 124 (48.7 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 24/53 (45%), Positives = 37/53 (69%)
Query: 233 QSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
++K A +E +++ + +M LK+Y+ELM +K+ LDVEIA YR L+E EE L
Sbjct: 387 RNKLAGLEDALQKAKQDMARLLKEYQELMNVKLALDVEIATYRKLLEGEECRL 439
>UNIPROTKB|Q148H7 [details] [associations]
symbol:KRT79 "Keratin, type II cytoskeletal 79"
species:9913 "Bos taurus" [GO:0045095 "keratin filament"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
GO:GO:0005198 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045095 HOGENOM:HOG000230976 PANTHER:PTHR23239:SF18 KO:K07605
GeneTree:ENSGT00610000085801 EMBL:BC118314 IPI:IPI00707469
RefSeq:NP_001068816.1 UniGene:Bt.23489 ProteinModelPortal:Q148H7
PRIDE:Q148H7 Ensembl:ENSBTAT00000016839 GeneID:508202
KEGG:bta:508202 CTD:338785 eggNOG:NOG150909 InParanoid:Q148H7
OMA:HLYEMEL OrthoDB:EOG4S1T74 NextBio:20868405 Uniprot:Q148H7
Length = 535
Score = 124 (48.7 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 25/84 (29%), Positives = 47/84 (55%)
Query: 202 GKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELM 261
G+ D + + + + + E ++ Q K ++A + + + ++ L+DY+ LM
Sbjct: 374 GEADAVKKQCQQLQTAIADAEQHGELALKDAQKKLGDLDAALNQAKEDLARLLRDYQALM 433
Query: 262 EIKINLDVEIAQYRNLMEAEESSL 285
+K+ LDVEIA YR L+E+EES +
Sbjct: 434 NVKLALDVEIATYRKLLESEESRM 457
>RGD|1359576 [details] [associations]
symbol:Krt75 "keratin 75" species:10116 "Rattus norvegicus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=ISO] [GO:0045095 "keratin
filament" evidence=IEA] InterPro:IPR001664 InterPro:IPR003054
PRINTS:PR01276 RGD:1359576 GO:GO:0005198 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095 HSSP:P08670
HOGENOM:HOG000230976 PANTHER:PTHR23239:SF18 eggNOG:NOG146769
KO:K07605 GeneTree:ENSGT00610000085801 OrthoDB:EOG4P8FJ6 CTD:9119
EMBL:AABR03056237 EMBL:BK003980 IPI:IPI00421782
RefSeq:NP_001008828.1 UniGene:Rn.229344 ProteinModelPortal:Q6IG05
SMR:Q6IG05 PhosphoSite:Q6IG05 PRIDE:Q6IG05
Ensembl:ENSRNOT00000012640 GeneID:300247 KEGG:rno:300247
UCSC:RGD:1359576 NextBio:646629 Genevestigator:Q6IG05
Uniprot:Q6IG05
Length = 542
Score = 124 (48.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 219 TERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLM 278
TE+ EL ++ ++K +E +++ + +M L++Y+ELM +K+ LDVEIA YR L+
Sbjct: 389 TEQRGELA--LKDARAKLVELEDALQKAKQDMARLLREYQELMNVKLALDVEIATYRKLL 446
Query: 279 EAEESSL 285
E EE L
Sbjct: 447 EGEECRL 453
>UNIPROTKB|G3X7V4 [details] [associations]
symbol:LOC787600 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0045095 "keratin filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 GO:GO:0045095 PANTHER:PTHR23239:SF18
GeneTree:ENSGT00670000097789 EMBL:DAAA02012889
Ensembl:ENSBTAT00000046856 OMA:SATRTCG Uniprot:G3X7V4
Length = 462
Score = 123 (48.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 27/80 (33%), Positives = 49/80 (61%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKI 265
++ ++L AA +T+ ++ E + + K A +E +++ + +M LK+Y+E+M K+
Sbjct: 340 SQNSKLEAA---VTQAEQQGEAALNDARGKLAGLEKTLQKAKQDMACLLKEYQEVMSAKL 396
Query: 266 NLDVEIAQYRNLMEAEESSL 285
LD+EIA YR L+E EE L
Sbjct: 397 GLDIEIATYRRLLEGEEQRL 416
>RGD|2984 [details] [associations]
symbol:Krt8 "keratin 8" species:10116 "Rattus norvegicus"
[GO:0005198 "structural molecule activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005882
"intermediate filament" evidence=ISO] [GO:0006915 "apoptotic process"
evidence=IEA;ISO] [GO:0016010 "dystrophin-associated glycoprotein
complex" evidence=IDA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0030018 "Z disc" evidence=ISO;IDA] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033209 "tumor necrosis factor-mediated
signaling pathway" evidence=IEA;ISO] [GO:0042383 "sarcolemma"
evidence=ISO;IDA] [GO:0043034 "costamere" evidence=IDA] [GO:0045095
"keratin filament" evidence=IDA] [GO:0045214 "sarcomere organization"
evidence=IDA] [GO:0051599 "response to hydrostatic pressure"
evidence=IDA] [GO:0051707 "response to other organism"
evidence=IEA;ISO] [GO:0060706 "cell differentiation involved in
embryonic placenta development" evidence=IEA;ISO] [GO:0071944 "cell
periphery" evidence=ISO] [GO:0097110 "scaffold protein binding"
evidence=ISO] InterPro:IPR001664 InterPro:IPR003054 PRINTS:PR01276
RGD:2984 GO:GO:0005654 GO:GO:0030018 GO:GO:0005198 GO:GO:0042383
GO:GO:0045214 GO:GO:0043034 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0016363 GO:GO:0045095 GO:GO:0016010 GO:GO:0051599
HOGENOM:HOG000230976 eggNOG:NOG146769 KO:K07605
GeneTree:ENSGT00670000097847 CTD:3856 OrthoDB:EOG4XKV78 OMA:TSGPRSF
EMBL:M63482 EMBL:S76054 EMBL:AY464139 EMBL:BC091106 EMBL:BC097497
IPI:IPI00389571 RefSeq:NP_955402.1 UniGene:Rn.11083
ProteinModelPortal:Q10758 SMR:Q10758 IntAct:Q10758 MINT:MINT-4596966
STRING:Q10758 PhosphoSite:Q10758 PRIDE:Q10758
Ensembl:ENSRNOT00000038480 GeneID:25626 KEGG:rno:25626 UCSC:RGD:2984
InParanoid:Q10758 NextBio:607413 Genevestigator:Q10758
GermOnline:ENSRNOG00000009779 Uniprot:Q10758
Length = 483
Score = 123 (48.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 25/66 (37%), Positives = 43/66 (65%)
Query: 220 ERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLME 279
E+ EL ++ +K ++ +++ + +M QL++Y+ELM +K+ LD+EIA YR L+E
Sbjct: 339 EQRGELA--VKDANAKLEDLKNALQKAKQDMARQLREYQELMNVKLALDIEIATYRKLLE 396
Query: 280 AEESSL 285
EES L
Sbjct: 397 GEESRL 402
>UNIPROTKB|F1N566 [details] [associations]
symbol:F1N566 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045095 "keratin filament" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR001664
InterPro:IPR003054 PRINTS:PR01276 GO:GO:0005198 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045095 PANTHER:PTHR23239:SF18 GeneTree:ENSGT00670000097789
EMBL:DAAA02012889 IPI:IPI00693420 Ensembl:ENSBTAT00000038457
OMA:EINELNC Uniprot:F1N566
Length = 357
Score = 121 (47.7 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 209 NELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLD 268
++L AA +T+ ++ E + K A +E +++ + M LK+Y+E+M K+ LD
Sbjct: 266 SKLEAA---VTQAEQQGEAALNDASCKLAGLEEALQKAKQNMASLLKEYQEVMNSKLGLD 322
Query: 269 VEIAQYRNLMEAEESSL 285
+EIA YR L+E EE L
Sbjct: 323 IEIATYRRLLEGEEQRL 339
>ZFIN|ZDB-GENE-070103-4 [details] [associations]
symbol:nefmb "neurofilament, medium polypeptide b"
species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248
ZFIN:ZDB-GENE-070103-4 GO:GO:0005198 GO:GO:0005882
HOGENOM:HOG000230977 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
OrthoDB:EOG4VMFFD KO:K04573 EMBL:BX005158 IPI:IPI00482469
RefSeq:NP_001116752.1 UniGene:Dr.90305 ProteinModelPortal:B0S553
SMR:B0S553 GeneID:100033387 KEGG:dre:100033387 CTD:100033387
OMA:ESICTED NextBio:20787839 Bgee:B0S553 Uniprot:B0S553
Length = 717
Score = 125 (49.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 29/86 (33%), Positives = 48/86 (55%)
Query: 202 GKYDTEMNELRAANYRLTERNKELEDQIEYEQSKFARM----EAEIKRLQTEMTEQLKDY 257
GK E+ LR L + ++ED+ + S + M E ++K + EM L++Y
Sbjct: 300 GK-SVELEALRGTKDSLERQLHDIEDRHNTDVSSYQEMIHQLENDLKGTKWEMARHLREY 358
Query: 258 RELMEIKINLDVEIAQYRNLMEAEES 283
++L+ +K+ LD EIA YR L+E EE+
Sbjct: 359 QDLLNVKMALDAEIAAYRKLLEGEET 384
>MGI|MGI:96700 [details] [associations]
symbol:Krt84 "keratin 84" species:10090 "Mus musculus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0030280
"structural constituent of epidermis" evidence=IDA] [GO:0045095
"keratin filament" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] [GO:0045616 "regulation of keratinocyte
differentiation" evidence=IDA] InterPro:IPR001664
InterPro:IPR003054 PRINTS:PR01276 MGI:MGI:96700 GO:GO:0045111
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0045616
GO:GO:0045095 HOGENOM:HOG000230976 PANTHER:PTHR23239:SF18
GO:GO:0030280 KO:K07605 GeneTree:ENSGT00670000097847 CTD:3890
eggNOG:NOG149575 OMA:EEIRICE OrthoDB:EOG4X3H17 EMBL:AY028607
EMBL:AC103674 EMBL:BC114971 EMBL:X65505 IPI:IPI00347019
RefSeq:NP_032500.2 UniGene:Mm.25292 ProteinModelPortal:Q99M73
SMR:Q99M73 STRING:Q99M73 PhosphoSite:Q99M73 PaxDb:Q99M73
PRIDE:Q99M73 Ensembl:ENSMUST00000023720 GeneID:16680 KEGG:mmu:16680
UCSC:uc007xtm.2 InParanoid:Q1RME6 NextBio:290425 Bgee:Q99M73
CleanEx:MM_KRT84 Genevestigator:Q99M73
GermOnline:ENSMUSG00000044294 Uniprot:Q99M73
Length = 603
Score = 124 (48.7 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 23/65 (35%), Positives = 41/65 (63%)
Query: 218 LTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNL 277
+ E ++ E + + K A +E +++ + +M QL++Y+ELM +K+ LD+EI YR L
Sbjct: 417 VAEAEQQGEAALNDAKCKLADLEGALQQAKQDMARQLREYQELMNVKLALDIEIVTYRRL 476
Query: 278 MEAEE 282
+E EE
Sbjct: 477 LEGEE 481
>UNIPROTKB|F1NDP8 [details] [associations]
symbol:KRT20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IEA] [GO:0045109 "intermediate filament organization"
evidence=IEA] [GO:0050708 "regulation of protein secretion"
evidence=IEA] InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248
GO:GO:0005794 GO:GO:0033554 GO:GO:0005198 GO:GO:0005882
GO:GO:0045109 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0050708
GeneTree:ENSGT00560000077101 EMBL:AADN02068741 IPI:IPI00575495
Ensembl:ENSGALT00000006099 OMA:HANEKAT Uniprot:F1NDP8
Length = 429
Score = 122 (48.0 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 206 TEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIKI 265
T +N + L E Q+ Q A++EA++++L+ +M Q +Y L++IK
Sbjct: 306 THLNMKKPLEDTLAETEARYSFQLAQIQETIAKLEAQLRQLRADMEAQNTEYSVLLDIKT 365
Query: 266 NLDVEIAQYRNLMEAEESSL 285
L++EIA YR L+E E+ L
Sbjct: 366 RLELEIATYRRLLEGEDVGL 385
>RGD|1359664 [details] [associations]
symbol:Krt1 "keratin 1" species:10116 "Rattus norvegicus"
[GO:0001867 "complement activation, lectin pathway"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISO] [GO:0030246
"carbohydrate binding" evidence=IEA;ISO] [GO:0045095 "keratin
filament" evidence=IEA;ISO] InterPro:IPR001664 InterPro:IPR003054
PRINTS:PR01276 RGD:1359664 GO:GO:0005886 GO:GO:0005198
GO:GO:0030246 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0045095 GO:GO:0001867 HSSP:P08670 HOGENOM:HOG000230976
PANTHER:PTHR23239:SF18 eggNOG:NOG146769 KO:K07605
GeneTree:ENSGT00610000085977 EMBL:AABR03057642 CTD:3848
OrthoDB:EOG48GW3H EMBL:BC127464 EMBL:X54806 EMBL:BK001580
IPI:IPI00421857 PIR:S21359 RefSeq:NP_001008802.2 UniGene:Rn.31789
ProteinModelPortal:Q6IMF3 SMR:Q6IMF3 STRING:Q6IMF3 PRIDE:Q6IMF3
Ensembl:ENSRNOT00000034450 GeneID:300250 KEGG:rno:300250
UCSC:RGD:1359664 InParanoid:A1L113 NextBio:646641
Genevestigator:Q6IMF3 Uniprot:Q6IMF3
Length = 625
Score = 124 (48.7 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 205 DTEMNELRAANYRLTERNKELEDQIEYEQSKFARMEAEIKRLQTEMTEQLKDYRELMEIK 264
D+ ++ +++ + E ++ Q+K +E + + + E+T L+DY+ELM K
Sbjct: 412 DSVKKQISQMQQNISDAEQRGEKALKDAQNKLNEIEDALTQAKEELTRLLRDYQELMNTK 471
Query: 265 INLDVEIAQYRNLMEAEE 282
+ LD+EIA YR L+E EE
Sbjct: 472 LALDMEIATYRKLLEGEE 489
>UNIPROTKB|P05785 [details] [associations]
symbol:KRT14 "Keratin, type I cytoskeletal 14" species:9913
"Bos taurus" [GO:0045110 "intermediate filament bundle assembly"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005882 "intermediate filament"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 GO:GO:0005634 GO:GO:0005737
GO:GO:0005198 GO:GO:0005882 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 HOGENOM:HOG000230975
eggNOG:NOG148784 EMBL:X01461 IPI:IPI01017838 PIR:S08613
UniGene:Bt.109787 ProteinModelPortal:P05785 STRING:P05785
PRIDE:P05785 InParanoid:P05785 GO:GO:0045110 Uniprot:P05785
Length = 93
Score = 100 (40.3 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 18/47 (38%), Positives = 34/47 (72%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+E ++ +L+ EM +Q ++Y+ L+++K L+ EIA YR L+E E++ L
Sbjct: 2 VEEQLAQLRCEMEQQNQEYKILLDVKTRLEQEIATYRRLLEGEDAHL 48
>UNIPROTKB|F1S0J9 [details] [associations]
symbol:F1S0J9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 GO:GO:0005198 GO:GO:0005882 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
EMBL:CU929492 Ensembl:ENSSSCT00000018993
GeneTree:ENSGT00700000104765 ArrayExpress:F1S0J9 Uniprot:F1S0J9
Length = 93
Score = 100 (40.3 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 18/47 (38%), Positives = 34/47 (72%)
Query: 239 MEAEIKRLQTEMTEQLKDYRELMEIKINLDVEIAQYRNLMEAEESSL 285
+E ++ +L+ EM +Q ++Y+ L+++K L+ EIA YR L+E E++ L
Sbjct: 2 VEEQLAQLRCEMEQQNQEYKILLDVKTRLEQEIATYRRLLEGEDAHL 48
WARNING: HSPs involving 134 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.128 0.346 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 288 261 0.00090 114 3 11 23 0.42 34
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 384
No. of states in DFA: 595 (63 KB)
Total size of DFA: 177 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.34u 0.12s 27.46t Elapsed: 00:00:02
Total cpu time: 27.36u 0.12s 27.48t Elapsed: 00:00:02
Start: Thu Aug 15 15:53:20 2013 End: Thu Aug 15 15:53:22 2013
WARNINGS ISSUED: 2