BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy210
(915 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|400404508|ref|YP_006587483.1| F0F1-type ATP synthase subunit alpha [Candidatus Carsonella ruddii
HT isolate Thao2000]
gi|400362984|gb|AFP84054.1| F0F1-type ATP synthase alpha subunit [Candidatus Carsonella ruddii
HT isolate Thao2000]
Length = 480
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/412 (81%), Positives = 372/412 (90%), Gaps = 1/412 (0%)
Query: 169 VLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIA 228
VL+++ +NL QGQKCFCT K+FE+PVG ELLG+I+NSKGE ++ K K K ++ +EKIA
Sbjct: 50 VLLNNFENLKQGQKCFCTNKVFEVPVGDELLGKILNSKGECLNIKHKLKTKKKDIIEKIA 109
Query: 229 PGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC 288
PGIMDR+SVNEPLLTGIK+ID MIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC
Sbjct: 110 PGIMDRDSVNEPLLTGIKAIDLMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC 169
Query: 289 IYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLG 348
IYVCIGQKISSLINV+NKLK YNC++YT++VAATA+DSAAEQYI+PYTGCTIGEYFRDLG
Sbjct: 170 IYVCIGQKISSLINVVNKLKKYNCLEYTIIVAATASDSAAEQYIAPYTGCTIGEYFRDLG 229
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+DCLIIYDDLTKHAW+YRQISLLL+RPPGREA+PGDVFYLHSRLLERSSK+N +FL+K
Sbjct: 230 KDCLIIYDDLTKHAWSYRQISLLLKRPPGREAYPGDVFYLHSRLLERSSKVNHFFLKKNN 289
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I K NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNS RPAINVGLSVS
Sbjct: 290 IL-KKNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSGIRPAINVGLSVS 348
Query: 469 RVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMKQKP 528
RVGGAAQ+KI+KKLSGDIRIMLAQYRELESFSKFSSDLD TK QL NGEKI+LLMKQ+P
Sbjct: 349 RVGGAAQHKIIKKLSGDIRIMLAQYRELESFSKFSSDLDFETKNQLQNGEKITLLMKQQP 408
Query: 529 HENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIINLKNNISIN 580
NYSI+EL+IILLIIKN FF KIP+ QIE FE II+Y R IN N + IN
Sbjct: 409 QNNYSIIELLIILLIIKNDFFIKIPVNQIEFFEKKIIQYVRSINFSNIVDIN 460
Score = 106 bits (264), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 161/345 (46%), Gaps = 22/345 (6%)
Query: 586 IGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKK 645
+ +N V + N +K+ T K PVGD LG+ILN G+ ++ K ++ +KK
Sbjct: 42 LNKNSVNIVLLNNFENLKQGQKCFCTNKVFEVPVGDELLGKILNSKGECLNIKHKLKTKK 101
Query: 646 KSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRN 705
K I + P ++ N L TGIK IDL+ P KG + + G GKT ++ I N
Sbjct: 102 KDIIEKIAPGIMDRDSVNEPLLTGIKAIDLMIPIGKGQRELIIGDRQTGKTTIAIDTIIN 161
Query: 706 IAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLS 765
++ C +++ +G++ + +++K+ N L+ ++ ++ + + TG +
Sbjct: 162 QKNKNVIC-IYVCIGQKISSLINVVNKLKKYNCLEYTIIVAATASDSAAEQYIAPYTGCT 220
Query: 766 IAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST 825
I E FR+ GKD L+ D++ + + ++S +L R P Y + +L ER S
Sbjct: 221 IGEYFRDLGKDCLIIYDDLTKHAWSYRQISLLLKRPPGREAYPGDVFYLHSRLLERSSKV 280
Query: 826 ------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
KNGT+T+ I D+T P+ + D I L + GI PA
Sbjct: 281 NHFFLKKNNILKKNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSGIRPA 340
Query: 874 IDPLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKELKDTS 914
I+ S S+ + G +K+ + +++ L +Y+EL+ S
Sbjct: 341 INVGLSVSR-----VGGAAQHKIIKKLSGDIRIMLAQYRELESFS 380
>gi|400404270|ref|YP_006587290.1| F0F1-type ATP synthase subunit alpha [Candidatus Carsonella ruddii
HC isolate Thao2000]
gi|400362791|gb|AFP83862.1| F0F1-type ATP synthase alpha subunit [Candidatus Carsonella ruddii
HC isolate Thao2000]
Length = 480
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/410 (81%), Positives = 377/410 (91%), Gaps = 1/410 (0%)
Query: 169 VLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIA 228
VL+++ +NL QGQKCFCT K+FE+PVG EL+G+I+NSKGE ++ K+K IK ++ +EKIA
Sbjct: 50 VLLNNFENLKQGQKCFCTNKVFEVPVGEELIGKILNSKGECLNIKQKLKIKKKDIIEKIA 109
Query: 229 PGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC 288
PG+MDRESVNEPLLTGIK+ID+MIPIGKGQRELIIGDRQTGKTTIA+D IINQKNKNVIC
Sbjct: 110 PGVMDRESVNEPLLTGIKAIDAMIPIGKGQRELIIGDRQTGKTTIALDIIINQKNKNVIC 169
Query: 289 IYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLG 348
IYVCIGQKISSLINV+NKLK +NC++YT++V+ATA+DSAAEQYI+PYTGCTIGEYFRDLG
Sbjct: 170 IYVCIGQKISSLINVVNKLKKHNCLEYTIIVSATASDSAAEQYIAPYTGCTIGEYFRDLG 229
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+DCLIIYDDLTKHAW+YRQISLLL+RPPGREA+PGDVFYLHSRLLERSSK+N FL+KK
Sbjct: 230 KDCLIIYDDLTKHAWSYRQISLLLKRPPGREAYPGDVFYLHSRLLERSSKVNNLFLKKKN 289
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
+F K NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDT+LFNSN RPAINVGLSVS
Sbjct: 290 VF-KKNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTSLFNSNIRPAINVGLSVS 348
Query: 469 RVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMKQKP 528
RVGGAAQYKI+KKLSGDIRIMLAQYRELESFSKFSSDLD TK QL NGEKI+LLMKQKP
Sbjct: 349 RVGGAAQYKIIKKLSGDIRIMLAQYRELESFSKFSSDLDSETKNQLQNGEKITLLMKQKP 408
Query: 529 HENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIINLKNNIS 578
H NYSI+EL+IILLIIKN FF KIP+ QIE FE II+Y R IN+ + IS
Sbjct: 409 HNNYSIIELLIILLIIKNDFFIKIPVNQIEYFEEKIIQYVRNINISDYIS 458
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 22/345 (6%)
Query: 586 IGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKK 645
+ +N V + N +K+ T K PVG+ +G+ILN G+ ++ K ++ KK
Sbjct: 42 LNKNSVNIVLLNNFENLKQGQKCFCTNKVFEVPVGEELIGKILNSKGECLNIKQKLKIKK 101
Query: 646 KSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRN 705
K I + P ++ N L TGIK ID + P KG + + G GKT +++I N
Sbjct: 102 KDIIEKIAPGVMDRESVNEPLLTGIKAIDAMIPIGKGQRELIIGDRQTGKTTIALDIIIN 161
Query: 706 IAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLS 765
++ C +++ +G++ + +++K+ N L+ ++ ++ + + TG +
Sbjct: 162 QKNKNVIC-IYVCIGQKISSLINVVNKLKKHNCLEYTIIVSATASDSAAEQYIAPYTGCT 220
Query: 766 IAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST 825
I E FR+ GKD L+ D++ + + ++S +L R P Y + +L ER S
Sbjct: 221 IGEYFRDLGKDCLIIYDDLTKHAWSYRQISLLLKRPPGREAYPGDVFYLHSRLLERSSKV 280
Query: 826 ------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
KNGT+T+ I D+T P+ + D I L + I PA
Sbjct: 281 NNLFLKKKNVFKKNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTSLFNSNIRPA 340
Query: 874 IDPLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKELKDTS 914
I+ S S+ + G YK+ + +++ L +Y+EL+ S
Sbjct: 341 INVGLSVSR-----VGGAAQYKIIKKLSGDIRIMLAQYRELESFS 380
>gi|400403794|ref|YP_006586910.1| F0F1-type ATP synthase subunit alpha [Candidatus Carsonella ruddii
CE isolate Thao2000]
gi|400362409|gb|AFP83482.1| F0F1-type ATP synthase alpha subunit [Candidatus Carsonella ruddii
CE isolate Thao2000]
Length = 480
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 328/412 (79%), Positives = 359/412 (87%), Gaps = 2/412 (0%)
Query: 169 VLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIA 228
VL+D+ L QG KC+CT KIFEI + + L+GRI+N+KGEFID KK IK + VEKIA
Sbjct: 50 VLLDEYIKLAQGDKCYCTNKIFEISINYNLIGRILNAKGEFIDLKKNIFIKEKYAVEKIA 109
Query: 229 PGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC 288
PG+MDRESVNE LLTGIK+IDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC
Sbjct: 110 PGVMDRESVNESLLTGIKAIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC 169
Query: 289 IYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLG 348
IYVCIGQKISSLINVI KLK YNC++YT++VAATAADSAAEQYI+PYT CTIGEYFRD G
Sbjct: 170 IYVCIGQKISSLINVIEKLKKYNCLNYTIIVAATAADSAAEQYIAPYTACTIGEYFRDKG 229
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
D LIIYDDLTKHAWAYRQISLLL+R PGREA+PGDVFYLHSRLLERSSK+N F++KK
Sbjct: 230 LDSLIIYDDLTKHAWAYRQISLLLKRSPGREAYPGDVFYLHSRLLERSSKVNNLFIKKK- 288
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
F G+LTAFPIIETLEGDVT+FIPTNVISITDGQIFLD NLFNSN RPAINVGLSVS
Sbjct: 289 -FKYETGSLTAFPIIETLEGDVTAFIPTNVISITDGQIFLDNNLFNSNVRPAINVGLSVS 347
Query: 469 RVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMKQKP 528
RVGGAAQYKIVKKLSGDIRIMLAQYRELE+FSKFSSDLDI TK QL NGEKI+LLMKQKP
Sbjct: 348 RVGGAAQYKIVKKLSGDIRIMLAQYRELEAFSKFSSDLDIETKNQLNNGEKITLLMKQKP 407
Query: 529 HENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIINLKNNISIN 580
++ YSI+EL ILLIIKN FF KI IE FE II Y R INL+N ++IN
Sbjct: 408 NDVYSIIELTTILLIIKNIFFKKIKTNYIEYFEKIIINYMRKINLENFLNIN 459
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 138/306 (45%), Gaps = 21/306 (6%)
Query: 624 LGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGG 683
+GRILN G+ ID K I K+K + + P ++ N L TGIK ID + P KG
Sbjct: 80 IGRILNAKGEFIDLKKNIFIKEKYAVEKIAPGVMDRESVNESLLTGIKAIDSMIPIGKGQ 139
Query: 684 KIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVS 743
+ + G GKT ++ I N ++ C +++ +G++ + ++K+ N L+
Sbjct: 140 RELIIGDRQTGKTTIAIDTIINQKNKNVIC-IYVCIGQKISSLINVIEKLKKYNCLNYTI 198
Query: 744 LIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPS 803
++ + + + T +I E FR+ G D L+ D++ + A ++S +L R+P
Sbjct: 199 IVAATAADSAAEQYIAPYTACTIGEYFRDKGLDSLIIYDDLTKHAWAYRQISLLLKRSPG 258
Query: 804 AVGYQPTLAEEMGKLQERISSTKN-----------GTITSVQAIYVPADDLTDPSPSTTF 852
Y + +L ER S N G++T+ I D+T P+
Sbjct: 259 REAYPGDVFYLHSRLLERSSKVNNLFIKKKFKYETGSLTAFPIIETLEGDVTAFIPTNVI 318
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYK 908
+ D I L + + PAI+ S S+ + G YK+ + +++ L +Y+
Sbjct: 319 SITDGQIFLDNNLFNSNVRPAINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYR 373
Query: 909 ELKDTS 914
EL+ S
Sbjct: 374 ELEAFS 379
>gi|400404272|ref|YP_006587292.1| F0F1-type ATP synthase subunit beta [Candidatus Carsonella ruddii
HC isolate Thao2000]
gi|400362793|gb|AFP83864.1| F0F1-type ATP synthase beta subunit [Candidatus Carsonella ruddii
HC isolate Thao2000]
Length = 447
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 314/361 (86%), Positives = 338/361 (93%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKN-NISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTG 612
I +IE + NI K + + + N NI + +VQQQIG+N+++ IAFG TNGIKRNT+V+DTG
Sbjct: 12 ILEIEFKKNNIPKIYNALYIPNLNIYL-EVQQQIGKNLIKAIAFGTTNGIKRNTLVIDTG 70
Query: 613 KPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKV 672
KPILTPVGD TLGRILNVLG+PIDNKG +N+ KK PIH++PPKFS Q FNNNILETGIKV
Sbjct: 71 KPILTPVGDITLGRILNVLGEPIDNKGNLNTLKKKPIHSIPPKFSEQKFNNNILETGIKV 130
Query: 673 IDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHE 732
IDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFY+E
Sbjct: 131 IDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYYE 190
Query: 733 MKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGT 792
MKESNVLDKVSLIYGQMNEPSGNRLRVALTGL+IAEEFRNSGKDVLLFIDNIYRFTLAGT
Sbjct: 191 MKESNVLDKVSLIYGQMNEPSGNRLRVALTGLTIAEEFRNSGKDVLLFIDNIYRFTLAGT 250
Query: 793 EVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTF 852
EVSAMLGRTPSAVGYQPTLAEEMGKLQERI+ST NGTITSVQAIYVPADDLTDPSPSTTF
Sbjct: 251 EVSAMLGRTPSAVGYQPTLAEEMGKLQERITSTNNGTITSVQAIYVPADDLTDPSPSTTF 310
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+HLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHY +AN+VKFYLQKYKELKD
Sbjct: 311 SHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYYIANKVKFYLQKYKELKD 370
Query: 913 T 913
T
Sbjct: 371 T 371
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 141/311 (45%), Gaps = 23/311 (7%)
Query: 193 PVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSMI 252
PVG LGRI+N GE IDNK ++ + I P +++ N L TGIK ID +
Sbjct: 76 PVGDITLGRILNVLGEPIDNKGNLNTLKKKPIHSIPPKFSEQKFNNNILETGIKVIDLLC 135
Query: 253 PIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC-IYVCIGQKISSLINVINKLKYYN 311
P KG + + G GKT ++ I N ++ C +++ +G++ + ++K N
Sbjct: 136 PFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYYEMKESN 195
Query: 312 CMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISLL 371
+D ++ + + + TG TI E FR+ G+D L+ D++ + A ++S +
Sbjct: 196 VLDKVSLIYGQMNEPSGNRLRVALTGLTIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAM 255
Query: 372 LRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDVT 431
L R P + L E K+ +++I + NNGT+T+ I D+T
Sbjct: 256 LGRTPSAVGY-------QPTLAEEMGKL------QERITSTNNGTITSVQAIYVPADDLT 302
Query: 432 SFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGDI 486
P+ S D I L + PAI+ S S+ + G Y I K +
Sbjct: 303 DPSPSTTFSHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYYIANK----V 358
Query: 487 RIMLAQYRELE 497
+ L +Y+EL+
Sbjct: 359 KFYLQKYKELK 369
>gi|400404510|ref|YP_006587485.1| F0F1-type ATP synthase subunit beta [Candidatus Carsonella ruddii
HT isolate Thao2000]
gi|400362986|gb|AFP84056.1| F0F1-type ATP synthase beta subunit [Candidatus Carsonella ruddii
HT isolate Thao2000]
Length = 447
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 311/361 (86%), Positives = 338/361 (93%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKN-NISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTG 612
I +IE + NI K + + + N NI + +VQQQIG N+++ IAFG TNGIKRNT+V+DTG
Sbjct: 12 IIEIEFKKNNIPKIYNALYIPNLNIYL-EVQQQIGNNLIKAIAFGTTNGIKRNTLVIDTG 70
Query: 613 KPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKV 672
KPIL+PVGD TLGRILNVLG+PIDNKG++N KK PIH++PP+FS+Q FNNNILETGIKV
Sbjct: 71 KPILSPVGDVTLGRILNVLGEPIDNKGKLNILKKKPIHSMPPRFSDQKFNNNILETGIKV 130
Query: 673 IDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHE 732
IDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFY+E
Sbjct: 131 IDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYYE 190
Query: 733 MKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGT 792
MKESNVL+KVSLIYGQMNEPSGNRLRVALTGL+IAEEFR+SGKDVLLFIDNIYRFTLAGT
Sbjct: 191 MKESNVLNKVSLIYGQMNEPSGNRLRVALTGLTIAEEFRDSGKDVLLFIDNIYRFTLAGT 250
Query: 793 EVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTF 852
EVSAMLGRTPSAVGYQPTLAEEMGKLQERISST NGTITSVQAIYVPADDLTDPSPSTTF
Sbjct: 251 EVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTNNGTITSVQAIYVPADDLTDPSPSTTF 310
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+HLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGE+HY VAN+VKFYLQKYKELKD
Sbjct: 311 SHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEDHYYVANKVKFYLQKYKELKD 370
Query: 913 T 913
T
Sbjct: 371 T 371
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 143/311 (45%), Gaps = 23/311 (7%)
Query: 193 PVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSMI 252
PVG LGRI+N GE IDNK K I ++ + + P D++ N L TGIK ID +
Sbjct: 76 PVGDVTLGRILNVLGEPIDNKGKLNILKKKPIHSMPPRFSDQKFNNNILETGIKVIDLLC 135
Query: 253 PIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC-IYVCIGQKISSLINVINKLKYYN 311
P KG + + G GKT ++ I N ++ C +++ +G++ + ++K N
Sbjct: 136 PFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYYEMKESN 195
Query: 312 CMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISLL 371
++ ++ + + + TG TI E FRD G+D L+ D++ + A ++S +
Sbjct: 196 VLNKVSLIYGQMNEPSGNRLRVALTGLTIAEEFRDSGKDVLLFIDNIYRFTLAGTEVSAM 255
Query: 372 LRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDVT 431
L R P + L E K+ +++I + NNGT+T+ I D+T
Sbjct: 256 LGRTPSAVGY-------QPTLAEEMGKL------QERISSTNNGTITSVQAIYVPADDLT 302
Query: 432 SFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGDI 486
P+ S D I L + PAI+ S S+ + G Y + K +
Sbjct: 303 DPSPSTTFSHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEDHYYVANK----V 358
Query: 487 RIMLAQYRELE 497
+ L +Y+EL+
Sbjct: 359 KFYLQKYKELK 369
>gi|400404730|ref|YP_006587662.1| F0F1-type ATP synthase subunit alpha [Candidatus Carsonella ruddii
PC isolate NHV]
gi|400363165|gb|AFP84234.1| F0F1-type ATP synthase alpha subunit [Candidatus Carsonella ruddii
PC isolate NHV]
Length = 481
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 318/418 (76%), Positives = 359/418 (85%), Gaps = 1/418 (0%)
Query: 169 VLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIA 228
+++D+ LTQG+KC+CT KIFE+PVG +L+GRI+NSKGE +D KF +N ++EKIA
Sbjct: 50 IILDNYNKLTQGEKCYCTNKIFEVPVGKQLIGRIINSKGEHLDLLPKFKSENFSSIEKIA 109
Query: 229 PGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC 288
PG+MDRE+VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTI IDTIINQKNKNVIC
Sbjct: 110 PGVMDRETVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTICIDTIINQKNKNVIC 169
Query: 289 IYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLG 348
+YVCIGQKISSLIN INKLK +NC+DYT+++A+TA+DSAAEQYI+PYTG TI EYFRD G
Sbjct: 170 VYVCIGQKISSLINTINKLKKFNCLDYTIIIASTASDSAAEQYIAPYTGSTISEYFRDKG 229
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
QDCLI+YDDLTKHAWAYRQISLLLRRPPGREA+PGDVFYLHSRLLERSSKINK F+ KK
Sbjct: 230 QDCLIVYDDLTKHAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERSSKINKLFVNKKS 289
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
K G+LTAFPIIETLEGDVTSFIPTNVISITDGQIFLD+NLFNS RPAINVGLSVS
Sbjct: 290 NILK-TGSLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDSNLFNSGIRPAINVGLSVS 348
Query: 469 RVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMKQKP 528
RVGGAAQYKIVKK+SGDIRIMLAQYRELE+FSKFSSDLD TK QL GEKI++LMKQ
Sbjct: 349 RVGGAAQYKIVKKISGDIRIMLAQYRELEAFSKFSSDLDNETKNQLIIGEKITILMKQNL 408
Query: 529 HENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIINLKNNISINKVQQQI 586
H Y+I ELI+ILLIIK+ FF IPI QIE FE II Y R I +I + ++
Sbjct: 409 HNVYNIFELILILLIIKHDFFKLIPINQIEYFENKIINYLRKIKFNEQFNIEDLNLEV 466
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 164/370 (44%), Gaps = 34/370 (9%)
Query: 566 KYFRIINLKNNI-----SINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVG 620
KY +I NNI S+NK V I N N + + T K PVG
Sbjct: 24 KYGEMIYFSNNIKGIVFSLNKKN-------VNIIILDNYNKLTQGEKCYCTNKIFEVPVG 76
Query: 621 DCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFL 680
+GRI+N G+ +D + S+ S I + P ++ N L TGIK ID + P
Sbjct: 77 KQLIGRIINSKGEHLDLLPKFKSENFSSIEKIAPGVMDRETVNEPLLTGIKSIDSMIPIG 136
Query: 681 KGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD 740
KG + + G GKT ++ I N ++ C V++ +G++ + +++K+ N LD
Sbjct: 137 KGQRELIIGDRQTGKTTICIDTIINQKNKNVIC-VYVCIGQKISSLINTINKLKKFNCLD 195
Query: 741 KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGR 800
+I ++ + + TG +I+E FR+ G+D L+ D++ + A ++S +L R
Sbjct: 196 YTIIIASTASDSAAEQYIAPYTGSTISEYFRDKGQDCLIVYDDLTKHAWAYRQISLLLRR 255
Query: 801 TPSAVGYQPTLAEEMGKLQERISST------------KNGTITSVQAIYVPADDLTDPSP 848
P Y + +L ER S K G++T+ I D+T P
Sbjct: 256 PPGREAYPGDVFYLHSRLLERSSKINKLFVNKKSNILKTGSLTAFPIIETLEGDVTSFIP 315
Query: 849 STTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHY----KVANEVKFYL 904
+ + D I L + GI PAI+ S S+ + G Y K++ +++ L
Sbjct: 316 TNVISITDGQIFLDSNLFNSGIRPAINVGLSVSR-----VGGAAQYKIVKKISGDIRIML 370
Query: 905 QKYKELKDTS 914
+Y+EL+ S
Sbjct: 371 AQYRELEAFS 380
>gi|116334909|ref|YP_802404.1| F0F1-type ATP synthase alpha subunit [Candidatus Carsonella ruddii
PV]
gi|123320793|sp|Q05FY3.1|ATPA_CARRP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|13272346|gb|AAK17109.1|AF291051_6 ATP synthase alpha subunit [Candidatus Carsonella ruddii]
gi|116235190|dbj|BAF35038.1| F0F1-type ATP synthase alpha subunit [Candidatus Carsonella ruddii
PV]
Length = 481
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 314/412 (76%), Positives = 358/412 (86%), Gaps = 1/412 (0%)
Query: 169 VLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIA 228
+++++ LTQG+KC+CT KIFE+PVG +L+GRI+NS+GE +D + I +EKIA
Sbjct: 50 IILNNYNELTQGEKCYCTNKIFEVPVGKQLIGRIINSRGETLDLLPEIKINEFSPIEKIA 109
Query: 229 PGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC 288
PG+MDRE+VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTI IDTIINQKNKN+IC
Sbjct: 110 PGVMDRETVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTICIDTIINQKNKNIIC 169
Query: 289 IYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLG 348
+YVCIGQKISSLIN+INKLK +NC++YT++VA+TA+DSAAEQYI+PYTG TI EYFRD G
Sbjct: 170 VYVCIGQKISSLINIINKLKKFNCLEYTIIVASTASDSAAEQYIAPYTGSTISEYFRDKG 229
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
QDCLI+YDDLTKHAWAYRQISLLLRRPPGREA+PGDVFYLHSRLLERSSK+NK+F+ KK
Sbjct: 230 QDCLIVYDDLTKHAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERSSKVNKFFVNKKS 289
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
K G+LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNS RP+INVGLSVS
Sbjct: 290 NILK-AGSLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSGIRPSINVGLSVS 348
Query: 469 RVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMKQKP 528
RVGGAAQYKI+KKLSGDIRIMLAQYRELE+FSKFSSDLD TK QL GEKI++LMKQ
Sbjct: 349 RVGGAAQYKIIKKLSGDIRIMLAQYRELEAFSKFSSDLDSETKNQLIIGEKITILMKQNI 408
Query: 529 HENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIINLKNNISIN 580
H+ Y I ELI+ILLIIK+ FF IPI Q+E FE II Y R I KN I I+
Sbjct: 409 HDVYDIFELILILLIIKHDFFRLIPINQVEYFENKIINYLRKIKFKNQIEID 460
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 154/340 (45%), Gaps = 22/340 (6%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V I N N + + T K PVG +GRI+N G+ +D EI + SPI
Sbjct: 47 VNIIILNNYNELTQGEKCYCTNKIFEVPVGKQLIGRIINSRGETLDLLPEIKINEFSPIE 106
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P ++ N L TGIK ID + P KG + + G GKT ++ I N ++
Sbjct: 107 KIAPGVMDRETVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTICIDTIINQKNKN 166
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C V++ +G++ + +++K+ N L+ ++ ++ + + TG +I+E F
Sbjct: 167 IIC-VYVCIGQKISSLINIINKLKKFNCLEYTIIVASTASDSAAEQYIAPYTGSTISEYF 225
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A ++S +L R P Y + +L ER S
Sbjct: 226 RDKGQDCLIVYDDLTKHAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERSSKVNKFFV 285
Query: 826 -------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLE 878
K G++T+ I D+T P+ + D I L + GI P+I+
Sbjct: 286 NKKSNILKAGSLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSGIRPSINVGL 345
Query: 879 SYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKELKDTS 914
S S+ + G YK+ + +++ L +Y+EL+ S
Sbjct: 346 SVSR-----VGGAAQYKIIKKLSGDIRIMLAQYRELEAFS 380
>gi|13272348|gb|AAK17111.1|AF291051_8 ATP synthase beta subunit [Candidatus Carsonella ruddii]
Length = 447
Score = 613 bits (1580), Expect = e-172, Method: Compositional matrix adjust.
Identities = 297/333 (89%), Positives = 316/333 (94%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQIG NIVRTIA G+T G+KR +V+DT KPILTPVG+CTLGRILNVLG+PIDN GE
Sbjct: 39 EVQQQIGNNIVRTIALGSTYGLKRYLLVIDTKKPILTPVGNCTLGRILNVLGNPIDNNGE 98
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S KK PIH PPKFS+Q+F+NNILETGIKVIDLLCPFL+GGKIGLFGGAGVGKT+NMM
Sbjct: 99 IISNKKKPIHCSPPKFSDQVFSNNILETGIKVIDLLCPFLRGGKIGLFGGAGVGKTINMM 158
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEHKGCSVFIGVGER+REGNDFY+EMKESNVLDKVSLIYGQMNEPSGNRLRVA
Sbjct: 159 ELIRNIAIEHKGCSVFIGVGERTREGNDFYYEMKESNVLDKVSLIYGQMNEPSGNRLRVA 218
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGLSIAEEFR GKDVLLFIDNIYRFTLAGTE+SA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 219 LTGLSIAEEFREMGKDVLLFIDNIYRFTLAGTEISALLGRMPSAVGYQPTLAEEMGKLQE 278
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RISSTKNG+ITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY
Sbjct: 279 RISSTKNGSITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 338
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKDT 913
SKQLDPYIVG EHY++AN VKFYLQKYKELKDT
Sbjct: 339 SKQLDPYIVGIEHYEIANSVKFYLQKYKELKDT 371
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 143/318 (44%), Gaps = 23/318 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T+K PVG LGRI+N G IDN + + ++ + P D+ N L TGI
Sbjct: 69 TKKPILTPVGNCTLGRILNVLGNPIDNNGEIISNKKKPIHCSPPKFSDQVFSNNILETGI 128
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC-IYVCIGQKISSLINVI 304
K ID + P +G + + G GKT ++ I N ++ C +++ +G++ +
Sbjct: 129 KVIDLLCPFLRGGKIGLFGGAGVGKTINMMELIRNIAIEHKGCSVFIGVGERTREGNDFY 188
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
++K N +D ++ + + + TG +I E FR++G+D L+ D++ + A
Sbjct: 189 YEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFREMGKDVLLFIDNIYRFTLA 248
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
+IS LL R P + L E K+ +++I + NG++T+ I
Sbjct: 249 GTEISALLGRMPSAVGY-------QPTLAEEMGKL------QERISSTKNGSITSVQAIY 295
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P+ + D I L + PAI+ S S+ + G Y+I
Sbjct: 296 VPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGIEHYEI- 354
Query: 480 KKLSGDIRIMLAQYRELE 497
+ ++ L +Y+EL+
Sbjct: 355 ---ANSVKFYLQKYKELK 369
>gi|116334911|ref|YP_802406.1| F0F1 ATP synthase subunit beta [Candidatus Carsonella ruddii PV]
gi|123126215|sp|Q05FY1.1|ATPB_CARRP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|116235192|dbj|BAF35040.1| F0F1-type ATP synthase beta subunit [Candidatus Carsonella ruddii
PV]
Length = 447
Score = 613 bits (1580), Expect = e-172, Method: Compositional matrix adjust.
Identities = 297/333 (89%), Positives = 316/333 (94%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQIG NIVRTIA G+T G+KR +V+DT KPILTPVG+CTLGRILNVLG+PIDN GE
Sbjct: 39 EVQQQIGNNIVRTIALGSTYGLKRYLLVIDTKKPILTPVGNCTLGRILNVLGNPIDNNGE 98
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S KK PIH PPKFS+Q+F+NNILETGIKVIDLLCPFL+GGKIGLFGGAGVGKT+NMM
Sbjct: 99 IISNKKKPIHCSPPKFSDQVFSNNILETGIKVIDLLCPFLRGGKIGLFGGAGVGKTINMM 158
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEHKGCSVFIGVGER+REGNDFY+EMKESNVLDKVSLIYGQMNEPSGNRLRVA
Sbjct: 159 ELIRNIAIEHKGCSVFIGVGERTREGNDFYYEMKESNVLDKVSLIYGQMNEPSGNRLRVA 218
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGLSIAEEFR GKDVLLFIDNIYRFTLAGTE+SA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 219 LTGLSIAEEFREMGKDVLLFIDNIYRFTLAGTEISALLGRMPSAVGYQPTLAEEMGKLQE 278
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RISSTKNG+ITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY
Sbjct: 279 RISSTKNGSITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 338
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKDT 913
SKQLDPYIVG EHY++AN VKFYLQKYKELKDT
Sbjct: 339 SKQLDPYIVGIEHYEIANSVKFYLQKYKELKDT 371
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 143/318 (44%), Gaps = 23/318 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T+K PVG LGRI+N G IDN + + ++ + P D+ N L TGI
Sbjct: 69 TKKPILTPVGNCTLGRILNVLGNPIDNNGEIISNKKKPIHCSPPKFSDQVFSNNILETGI 128
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC-IYVCIGQKISSLINVI 304
K ID + P +G + + G GKT ++ I N ++ C +++ +G++ +
Sbjct: 129 KVIDLLCPFLRGGKIGLFGGAGVGKTINMMELIRNIAIEHKGCSVFIGVGERTREGNDFY 188
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
++K N +D ++ + + + TG +I E FR++G+D L+ D++ + A
Sbjct: 189 YEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFREMGKDVLLFIDNIYRFTLA 248
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
+IS LL R P + L E K+ +++I + NG++T+ I
Sbjct: 249 GTEISALLGRMPSAVGY-------QPTLAEEMGKL------QERISSTKNGSITSVQAIY 295
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P+ + D I L + PAI+ S S+ + G Y+I
Sbjct: 296 VPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGIEHYEI- 354
Query: 480 KKLSGDIRIMLAQYRELE 497
+ ++ L +Y+EL+
Sbjct: 355 ---ANSVKFYLQKYKELK 369
>gi|400404732|ref|YP_006587664.1| F0F1-type ATP synthase subunit beta [Candidatus Carsonella ruddii
PC isolate NHV]
gi|400363167|gb|AFP84236.1| F0F1-type ATP synthase beta subunit [Candidatus Carsonella ruddii
PC isolate NHV]
Length = 447
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 296/333 (88%), Positives = 315/333 (94%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQIG NIVRTIA GNT G+KR +V+DT KPILTPVG+CTLGRILNVLGDPIDN G+
Sbjct: 39 EVQQQIGNNIVRTIALGNTYGLKRYLLVIDTKKPILTPVGNCTLGRILNVLGDPIDNNGK 98
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I KK PIH PPKFS+QIF+NNILETGIK+IDLLCPFLKGGKIGLFGGAGVGKT+NMM
Sbjct: 99 ILFNKKKPIHCSPPKFSDQIFSNNILETGIKIIDLLCPFLKGGKIGLFGGAGVGKTINMM 158
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEHKGCSVFIGVGER+REGNDFY+EMKESNVLDKVSLIYGQMNEPSGNRLRVA
Sbjct: 159 ELIRNIAIEHKGCSVFIGVGERTREGNDFYYEMKESNVLDKVSLIYGQMNEPSGNRLRVA 218
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL+IAEEFR GKDVLLFIDNIYRFTLAGTE+SA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 219 LTGLTIAEEFREMGKDVLLFIDNIYRFTLAGTEISALLGRMPSAVGYQPTLAEEMGKLQE 278
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RISSTKNG+ITSVQAIYVPADDLTDPSPSTTF+HLDSTIVLSRQIAELGIYPAIDPLESY
Sbjct: 279 RISSTKNGSITSVQAIYVPADDLTDPSPSTTFSHLDSTIVLSRQIAELGIYPAIDPLESY 338
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKDT 913
SKQLDPYIVG EHY++AN VKFYLQKYKELKDT
Sbjct: 339 SKQLDPYIVGLEHYEIANSVKFYLQKYKELKDT 371
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 144/318 (45%), Gaps = 23/318 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T+K PVG LGRI+N G+ IDN K L ++ + P D+ N L TGI
Sbjct: 69 TKKPILTPVGNCTLGRILNVLGDPIDNNGKILFNKKKPIHCSPPKFSDQIFSNNILETGI 128
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC-IYVCIGQKISSLINVI 304
K ID + P KG + + G GKT ++ I N ++ C +++ +G++ +
Sbjct: 129 KIIDLLCPFLKGGKIGLFGGAGVGKTINMMELIRNIAIEHKGCSVFIGVGERTREGNDFY 188
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
++K N +D ++ + + + TG TI E FR++G+D L+ D++ + A
Sbjct: 189 YEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLTIAEEFREMGKDVLLFIDNIYRFTLA 248
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
+IS LL R P + L E K+ +++I + NG++T+ I
Sbjct: 249 GTEISALLGRMPSAVGY-------QPTLAEEMGKL------QERISSTKNGSITSVQAIY 295
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P+ S D I L + PAI+ S S+ + G Y+I
Sbjct: 296 VPADDLTDPSPSTTFSHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGLEHYEI- 354
Query: 480 KKLSGDIRIMLAQYRELE 497
+ ++ L +Y+EL+
Sbjct: 355 ---ANSVKFYLQKYKELK 369
>gi|400404032|ref|YP_006587100.1| F0F1 ATP synthase subunit alpha [Candidatus Carsonella ruddii CS
isolate Thao2000]
gi|400362600|gb|AFP83672.1| F0F1-type ATP synthase alpha subunit [Candidatus Carsonella ruddii
CS isolate Thao2000]
Length = 480
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 332/422 (78%), Positives = 364/422 (86%), Gaps = 4/422 (0%)
Query: 169 VLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIA 228
VL+D+ L QG KC+CT KIFEI + F L+GRI+N+KGEFID KK IK + +VEKIA
Sbjct: 50 VLLDEYIKLAQGDKCYCTNKIFEISINFNLIGRILNAKGEFIDLKKNIFIKEKYSVEKIA 109
Query: 229 PGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC 288
PG+MDRESVNEPLLTGIK+IDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC
Sbjct: 110 PGVMDRESVNEPLLTGIKAIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC 169
Query: 289 IYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLG 348
IYVCIGQKISSLINVI KLK NC+ YT+++AATAADSAAEQYI+PYT CTIGEYFRD G
Sbjct: 170 IYVCIGQKISSLINVIEKLKKNNCLKYTIIIAATAADSAAEQYIAPYTACTIGEYFRDKG 229
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
D LIIYDDLTKHAWAYRQISLLL+R PGREA+PGDVFYLHSRLLERSSK+N F++KK
Sbjct: 230 LDSLIIYDDLTKHAWAYRQISLLLKRSPGREAYPGDVFYLHSRLLERSSKVNNIFIKKK- 288
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
F G+LTAFPIIETLEGDVTSFIPTNVISITDGQIFLD NLFNSN RPAINVGLSVS
Sbjct: 289 -FKYETGSLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDNNLFNSNIRPAINVGLSVS 347
Query: 469 RVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMKQKP 528
RVGGAAQYKIVKKLSGDIRIMLAQYRELE+FSKFSSDLDI TK QL NGEKI+LLMKQKP
Sbjct: 348 RVGGAAQYKIVKKLSGDIRIMLAQYRELEAFSKFSSDLDIETKNQLNNGEKITLLMKQKP 407
Query: 529 HENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIINLKN--NISINKVQQQI 586
+ YS++ELI ILLIIKN FF KI IE FE II Y R INL+N NI+ N ++ +I
Sbjct: 408 NNVYSVIELITILLIIKNIFFKKIKSSYIEYFEKIIINYMRKINLENFLNINDNNLEFKI 467
Query: 587 GE 588
E
Sbjct: 468 NE 469
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 138/306 (45%), Gaps = 21/306 (6%)
Query: 624 LGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGG 683
+GRILN G+ ID K I K+K + + P ++ N L TGIK ID + P KG
Sbjct: 80 IGRILNAKGEFIDLKKNIFIKEKYSVEKIAPGVMDRESVNEPLLTGIKAIDSMIPIGKGQ 139
Query: 684 KIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVS 743
+ + G GKT ++ I N ++ C +++ +G++ + ++K++N L
Sbjct: 140 RELIIGDRQTGKTTIAIDTIINQKNKNVIC-IYVCIGQKISSLINVIEKLKKNNCLKYTI 198
Query: 744 LIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPS 803
+I + + + T +I E FR+ G D L+ D++ + A ++S +L R+P
Sbjct: 199 IIAATAADSAAEQYIAPYTACTIGEYFRDKGLDSLIIYDDLTKHAWAYRQISLLLKRSPG 258
Query: 804 AVGYQPTLAEEMGKLQERISSTKN-----------GTITSVQAIYVPADDLTDPSPSTTF 852
Y + +L ER S N G++T+ I D+T P+
Sbjct: 259 REAYPGDVFYLHSRLLERSSKVNNIFIKKKFKYETGSLTAFPIIETLEGDVTSFIPTNVI 318
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYK 908
+ D I L + I PAI+ S S+ + G YK+ + +++ L +Y+
Sbjct: 319 SITDGQIFLDNNLFNSNIRPAINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYR 373
Query: 909 ELKDTS 914
EL+ S
Sbjct: 374 ELEAFS 379
>gi|400404034|ref|YP_006587102.1| F0F1 ATP synthase subunit beta [Candidatus Carsonella ruddii CS
isolate Thao2000]
gi|400362602|gb|AFP83674.1| F0F1-type ATP synthase beta subunit [Candidatus Carsonella ruddii
CS isolate Thao2000]
Length = 447
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 291/333 (87%), Positives = 311/333 (93%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQI NIVRTIA G+ NG++RN V+DT +PILTPVG+CTLGRILNVLG+PIDN G
Sbjct: 39 EVQQQINNNIVRTIALGDVNGLQRNFTVLDTKQPILTPVGECTLGRILNVLGEPIDNLGR 98
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I KS IH LPPKFS QI NNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM
Sbjct: 99 IPYLNKSAIHKLPPKFSEQISYNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 158
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIE+KGCSVFIGVGER+REGNDFY+EMK SNVLDKV+L+YGQMNEPSGNRLRVA
Sbjct: 159 ELIRNIAIEYKGCSVFIGVGERTREGNDFYYEMKNSNVLDKVTLVYGQMNEPSGNRLRVA 218
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGLSIAE FR++GKDVLLFIDNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 219 LTGLSIAENFRDNGKDVLLFIDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 278
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY
Sbjct: 279 RITSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 338
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKDT 913
SKQLDPYIVGEEH+++AN VKFYLQKYKELKDT
Sbjct: 339 SKQLDPYIVGEEHFEIANSVKFYLQKYKELKDT 371
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 150/336 (44%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
+ + D+ L + T++ PVG LGRI+N GE IDN + N+ + K+
Sbjct: 51 TIALGDVNGLQRNFTVLDTKQPILTPVGECTLGRILNVLGEPIDNLGRIPYLNKSAIHKL 110
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
P ++ S N L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 111 PPKFSEQISYNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEYKG 170
Query: 288 C-IYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
C +++ +G++ + ++K N +D +V + + + TG +I E FRD
Sbjct: 171 CSVFIGVGERTREGNDFYYEMKNSNVLDKVTLVYGQMNEPSGNRLRVALTGLSIAENFRD 230
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L+ D++ + A ++S LL R P + L E K+ +
Sbjct: 231 NGKDVLLFIDNIYRFTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGKL------Q 277
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + NGT+T+ I D+T P+ + D I L + PAI+ S
Sbjct: 278 ERITSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLES 337
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
S+ + G ++I + ++ L +Y+EL+
Sbjct: 338 YSKQLDPYIVGEEHFEI----ANSVKFYLQKYKELK 369
>gi|400403796|ref|YP_006586912.1| F0F1-type ATP synthase subunit beta [Candidatus Carsonella ruddii
CE isolate Thao2000]
gi|400362411|gb|AFP83484.1| F0F1-type ATP synthase beta subunit [Candidatus Carsonella ruddii
CE isolate Thao2000]
Length = 447
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 290/333 (87%), Positives = 311/333 (93%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQI NIVRTIA G+ NG++RN +V+DT PILTPVG+CTLGRILNVLG+PIDN G+
Sbjct: 39 EVQQQINNNIVRTIALGDVNGLQRNFLVIDTKNPILTPVGECTLGRILNVLGEPIDNLGK 98
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I K IH LPPKFS QI NNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM
Sbjct: 99 ILYLNKIAIHKLPPKFSEQISYNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 158
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIE+KGCSVFIGVGER+REGNDFY+EMK SNVLDKV+L+YGQMNEPSGNRLRVA
Sbjct: 159 ELIRNIAIEYKGCSVFIGVGERTREGNDFYYEMKNSNVLDKVTLVYGQMNEPSGNRLRVA 218
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGLSIAE FR++GKDVLLFIDNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 219 LTGLSIAENFRDNGKDVLLFIDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 278
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY
Sbjct: 279 RITSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 338
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKDT 913
SKQLDPYIVGEEH+++AN VKFYLQKYKELKDT
Sbjct: 339 SKQLDPYIVGEEHFEIANSVKFYLQKYKELKDT 371
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 142/311 (45%), Gaps = 23/311 (7%)
Query: 193 PVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSMI 252
PVG LGRI+N GE IDN K L N+ + K+ P ++ S N L TGIK ID +
Sbjct: 76 PVGECTLGRILNVLGEPIDNLGKILYLNKIAIHKLPPKFSEQISYNNILETGIKVIDLLC 135
Query: 253 PIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC-IYVCIGQKISSLINVINKLKYYN 311
P KG + + G GKT ++ I N + C +++ +G++ + ++K N
Sbjct: 136 PFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEYKGCSVFIGVGERTREGNDFYYEMKNSN 195
Query: 312 CMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISLL 371
+D +V + + + TG +I E FRD G+D L+ D++ + A ++S L
Sbjct: 196 VLDKVTLVYGQMNEPSGNRLRVALTGLSIAENFRDNGKDVLLFIDNIYRFTLAGTEVSAL 255
Query: 372 LRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDVT 431
L R P + L E K+ +++I + NGT+T+ I D+T
Sbjct: 256 LGRMPSAVGY-------QPTLAEEMGKL------QERITSTKNGTITSVQAIYVPADDLT 302
Query: 432 SFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGDI 486
P+ + D I L + PAI+ S S+ + G ++I + +
Sbjct: 303 DPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHFEI----ANSV 358
Query: 487 RIMLAQYRELE 497
+ L +Y+EL+
Sbjct: 359 KFYLQKYKELK 369
>gi|307547034|ref|YP_003899513.1| F0F1 ATP synthase subunit beta [Halomonas elongata DSM 2581]
gi|307219058|emb|CBV44328.1| F0F1 ATP synthase subunit beta [Halomonas elongata DSM 2581]
Length = 458
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 248/356 (69%), Positives = 299/356 (83%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + + + N+ +I +VQQQ+G+ +VRTIA G+T G+KR + +T I
Sbjct: 15 VEFPRDEVPKVYDALTVSNSETILEVQQQLGDGVVRTIAMGSTEGLKRGIEITNTDAAIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG+ TLGRI+NVLG+PID GEI +++ PIH P +++Q +LETGIKVIDL+
Sbjct: 75 VPVGEATLGRIMNVLGEPIDEAGEIGEQERMPIHRKAPGYADQAATEELLETGIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM+ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGVGERTREGNDFYHEMQES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL+IAE+FR+ G+DVLLF+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF+HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFSHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VL+R IAELGIYPAIDPL+S S+QLDP ++GEEHYKVA V+ LQ+YKELKD
Sbjct: 315 ATVVLARSIAELGIYPAIDPLDSTSRQLDPLVIGEEHYKVARGVQGVLQRYKELKD 370
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 149/329 (45%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + T+ +PVG LGRI+N GE ID + + R + + APG D+
Sbjct: 58 EGLKRGIEITNTDAAISVPVGEATLGRIMNVLGEPIDEAGEIGEQERMPIHRKAPGYADQ 117
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ E L TGIK ID + P KG + + G GKT ++ I N ++ ++ +
Sbjct: 118 AATEELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGV 177
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + ++++ N +D +V + + TG TI E FRD G+D L+
Sbjct: 178 GERTREGNDFYHEMQESNVLDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLL 237
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 238 FVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTK 284
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P S D + L ++ PAI+ S SR
Sbjct: 285 TGSITSVQAVYVPADDLTDPSPATTFSHLDATVVLARSIAELGIYPAIDPLDSTSRQLDP 344
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G YK+ + + G +L +Y+EL+
Sbjct: 345 LVIGEEHYKVARGVQG----VLQRYKELK 369
>gi|424865269|ref|ZP_18289138.1| ATP synthase F1, beta subunit [SAR86 cluster bacterium SAR86B]
gi|400758875|gb|EJP73075.1| ATP synthase F1, beta subunit [SAR86 cluster bacterium SAR86B]
Length = 458
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 248/356 (69%), Positives = 297/356 (83%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + NI + + + ++ +VQQQ+G+ +VR+IA G T G+KR +V T PI
Sbjct: 16 VEFDKDNIPNVYEALVIDGEETVLEVQQQLGDGVVRSIAMGTTEGLKRGMVVARTNAPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG+PID KG I K+K PIH PP +++Q +N +LETGIKVIDL+
Sbjct: 76 VPVGQETLGRIMDVLGNPIDEKGPIGEKEKLPIHAKPPSYTDQATSNELLETGIKVIDLI 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMTDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL+IAE+FR+ G+DVLLFIDNIYR+TLAG EVSA
Sbjct: 196 NVLDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLLFIDNIYRYTLAGVEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGALQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IAELGIYPA+DPL+S S+QLDP +VGE+HY+ A V+ LQ+YKELKD
Sbjct: 316 ATVVLSRSIAELGIYPAVDPLDSTSRQLDPLVVGEDHYETAQAVQGVLQRYKELKD 371
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 142/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG E LGRI++ G ID K K + + P D+
Sbjct: 59 EGLKRGMVVARTNAPISVPVGQETLGRIMDVLGNPIDEKGPIGEKEKLPIHAKPPSYTDQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ NE L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 ATSNELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ N +D +V + + TG TI E FRD G+D L+
Sbjct: 179 GERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 FIDNIYRYTLAGVEVSALLGR------MPSAVGY-QPTLAEEMGAL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ PA++ S SR
Sbjct: 286 TGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRSIAELGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + + G +L +Y+EL+
Sbjct: 346 LVVGEDHYETAQAVQG----VLQRYKELK 370
>gi|160872202|ref|ZP_02062334.1| ATP synthase F1, beta subunit [Rickettsiella grylli]
gi|159121001|gb|EDP46339.1| ATP synthase F1, beta subunit [Rickettsiella grylli]
Length = 463
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 253/356 (71%), Positives = 295/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E I K F + + + + +VQQQ+G+ IVRTIA G ++G+KR T V++T PI
Sbjct: 21 VEFPRGEIPKVFDALTVDGHDLVLEVQQQLGDGIVRTIAMGTSDGLKRGTKVMNTKAPIS 80
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G I+ + + PIH PP FS Q N +LETGIKVIDLL
Sbjct: 81 VPVGKQTLGRIMDVLGKPIDEAGPIHEEIRLPIHRKPPTFSEQAVNEQLLETGIKVIDLL 140
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMKES
Sbjct: 141 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKES 200
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE FR+ G+D+LLFIDNIYR+TLAG EVSA
Sbjct: 201 NVLDKVSLVYGQMNEPPGNRLRVALTGLTVAEYFRDEGRDILLFIDNIYRYTLAGVEVSA 260
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLA EMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD
Sbjct: 261 LLGRMPSAVGYQPTLAAEMGALQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLD 320
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSRQIAELGIYPAIDPL+S S+QLDP IVG+EHY VA V+ LQ++KELKD
Sbjct: 321 ATVVLSRQIAELGIYPAIDPLDSNSRQLDPLIVGQEHYDVARAVQKTLQRFKELKD 376
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 155/359 (43%), Gaps = 31/359 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T+ +PVG + LGRI++ G+ ID + R + + P +
Sbjct: 65 GLKRGTKVMNTKAPISVPVGKQTLGRIMDVLGKPIDEAGPIHEEIRLPIHR-KPPTFSEQ 123
Query: 236 SVNEPLL-TGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+VNE LL TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 124 AVNEQLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 183
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ EYFRD G+D L+
Sbjct: 184 GERTREGNDFYHEMKESNVLDKVSLVYGQMNEPPGNRLRVALTGLTVAEYFRDEGRDILL 243
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y + E + +++I +
Sbjct: 244 FIDNIYRYTLAGVEVSALLGR------MPSAVGYQPTLAAEMGAL-------QERITSTK 290
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + PAI+ S SR
Sbjct: 291 TGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAIDPLDSNSRQLDP 350
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMKQK 527
+ G Y + + A + L+ F + + I+ +L +K++++ +K
Sbjct: 351 LIVGQEHYDVAR----------AVQKTLQRFKELKDIIAILGMDELSEHDKLTVMRARK 399
>gi|289209746|ref|YP_003461812.1| ATP synthase F1 subunit beta [Thioalkalivibrio sp. K90mix]
gi|288945377|gb|ADC73076.1| ATP synthase F1, beta subunit [Thioalkalivibrio sp. K90mix]
Length = 458
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 247/359 (68%), Positives = 298/359 (83%), Gaps = 1/359 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + K + + L+N +++ +VQQQ+G+ +VRTIA G T G+KR T V TGK
Sbjct: 13 VVDVEFPHGEVPKVYDALTLENGLTL-EVQQQLGDGVVRTIAMGTTEGVKRQTPVTATGK 71
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGR+++VLG P+DN G++ +++ IH P F Q + +LETGIKVI
Sbjct: 72 PISVPVGKGTLGRVMDVLGRPVDNAGDVEAQETWSIHRAAPTFDEQAGSTELLETGIKVI 131
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM
Sbjct: 132 DLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEM 191
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTE 793
K+SNVLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G+DVL+FIDNIYR+TLAGTE
Sbjct: 192 KDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLMFIDNIYRYTLAGTE 251
Query: 794 VSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFT 853
VSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF
Sbjct: 252 VSALLGRMPSAVGYQPTLAEEMGVLQERITSTKKGSITSIQAVYVPADDLTDPSPATTFA 311
Query: 854 HLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSRQIAELGIYPA+DPL+S S+QLDP I+G+EHY A V+ LQ+YKELKD
Sbjct: 312 HLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPQIIGQEHYDTARAVQNTLQRYKELKD 370
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 137/319 (42%), Gaps = 23/319 (7%)
Query: 185 CTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTG 244
T K +PVG LGR+++ G +DN + ++ + AP ++ E L TG
Sbjct: 68 ATGKPISVPVGKGTLGRVMDVLGRPVDNAGDVEAQETWSIHRAAPTFDEQAGSTELLETG 127
Query: 245 IKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINV 303
IK ID + P KG + + G GKT ++ I N + ++ +G++ +
Sbjct: 128 IKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDF 187
Query: 304 INKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAW 363
+++K N +D +V + + TG T+ E+FRD G+D L+ D++ ++
Sbjct: 188 YHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLMFIDNIYRYTL 247
Query: 364 AYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPII 423
A ++S LL R P V Y L E + +++I + G++T+ +
Sbjct: 248 AGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKKGSITSIQAV 294
Query: 424 ETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKI 478
D+T P + D + L + PA++ S SR + G Y
Sbjct: 295 YVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPQIIGQEHYDT 354
Query: 479 VKKLSGDIRIMLAQYRELE 497
+ ++ L +Y+EL+
Sbjct: 355 ARA----VQNTLQRYKELK 369
>gi|338998414|ref|ZP_08637088.1| F0F1 ATP synthase subunit beta [Halomonas sp. TD01]
gi|338764731|gb|EGP19689.1| F0F1 ATP synthase subunit beta [Halomonas sp. TD01]
Length = 459
Score = 530 bits (1366), Expect = e-147, Method: Compositional matrix adjust.
Identities = 249/356 (69%), Positives = 298/356 (83%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + + N +I +VQQQ+G+ +VRTIA G+T G+KR V +TG I
Sbjct: 15 VEFPRDSVPKVYDALKVSNAETILEVQQQLGDGVVRTIAMGSTEGLKRGLDVTNTGTAIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID G I +++ PIH P +++Q +N +LETGIKVIDL+
Sbjct: 75 VPVGKETLGRIMNVLGEPIDEAGPIGEQERMPIHRKAPSYADQAASNELLETGIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGVGERTREGNDFYHEMTES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NV+DKVSL+YGQMNEP GNRLRVALTGL+IAE+FR+ G+DVLLF+DNIYR+TLAGTEVSA
Sbjct: 195 NVIDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF+HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFSHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VL+R IAELGIYPAIDPL+S S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 315 ATVVLARSIAELGIYPAIDPLDSTSRQLDPLVVGEEHYDVARGVQNVLQRYKELKD 370
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 145/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG E LGRI+N GE ID + R + + AP D+
Sbjct: 58 EGLKRGLDVTNTGTAISVPVGKETLGRIMNVLGEPIDEAGPIGEQERMPIHRKAPSYADQ 117
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ NE L TGIK ID + P KG + + G GKT ++ I N ++ ++ +
Sbjct: 118 AASNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGV 177
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ N +D +V + + TG TI E FRD G+D L+
Sbjct: 178 GERTREGNDFYHEMTESNVIDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLL 237
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 238 FVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTK 284
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P S D + L ++ PAI+ S SR
Sbjct: 285 TGSITSVQAVYVPADDLTDPSPATTFSHLDATVVLARSIAELGIYPAIDPLDSTSRQLDP 344
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 345 LVVGEEHYDVARG----VQNVLQRYKELK 369
>gi|399908087|ref|ZP_10776639.1| F0F1 ATP synthase subunit beta [Halomonas sp. KM-1]
Length = 458
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 248/356 (69%), Positives = 298/356 (83%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + +N+ N+ ++ +VQQQ+G+ +VRTIA G+T G+KR +TG PI
Sbjct: 15 VEFPRDSVPKVYDALNVANSETVLEVQQQLGDGVVRTIAMGSTEGLKRGMETTNTGAPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G+I +++ PIH P ++ Q +N +LETGIKVIDL+
Sbjct: 75 VPVGKETLGRIMDVLGRPIDEAGDIGEQERMPIHRPAPTYAEQAASNELLETGIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NV+DKVSL+YGQMNEP GNRLRVALTGL+IAE+FR+ G+DVLLF+DNIYR+TLAGTEVSA
Sbjct: 195 NVIDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKVGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VL+R IAELGIYPAIDPL+S S+QLDP +VGEEHY A V+ LQ+YKELKD
Sbjct: 315 ATVVLARSIAELGIYPAIDPLDSTSRQLDPLVVGEEHYNTARGVQNVLQRYKELKD 370
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 143/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + T +PVG E LGRI++ G ID + R + + AP ++
Sbjct: 58 EGLKRGMETTNTGAPISVPVGKETLGRIMDVLGRPIDEAGDIGEQERMPIHRPAPTYAEQ 117
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ NE L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 118 AASNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ N +D +V + + TG TI E FRD G+D L+
Sbjct: 178 GERTREGNDFYHEMTESNVIDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLL 237
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 238 FVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTK 284
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ PAI+ S SR
Sbjct: 285 VGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLARSIAELGIYPAIDPLDSTSRQLDP 344
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 345 LVVGEEHYNTARG----VQNVLQRYKELK 369
>gi|430762968|ref|YP_007218825.1| ATP synthase beta chain [Thioalkalivibrio nitratireducens DSM
14787]
gi|430012592|gb|AGA35344.1| ATP synthase beta chain [Thioalkalivibrio nitratireducens DSM
14787]
Length = 459
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 247/349 (70%), Positives = 294/349 (84%)
Query: 564 IIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCT 623
+ K + ++LK++ +VQQQ+G+ +VRTIA G+T+G+KR T VV TG I PVG T
Sbjct: 23 VPKVYEALSLKDHDLTLEVQQQLGDGVVRTIAMGSTDGLKRQTEVVSTGDAIQVPVGTAT 82
Query: 624 LGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGG 683
LGR+++VLG P+DN G + SK + IH P F Q + +LETGIKVIDLLCPF KGG
Sbjct: 83 LGRVMDVLGKPVDNAGPVESKDRWSIHRPAPAFDEQAGSTELLETGIKVIDLLCPFAKGG 142
Query: 684 KIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVS 743
K+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMKESNVLDKV+
Sbjct: 143 KVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKVA 202
Query: 744 LIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPS 803
L+YGQMNEP GNRLRVALTGL++AE FR+ G+DVL+FIDNIYR+TLAGTEVSA+LGR PS
Sbjct: 203 LVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLMFIDNIYRYTLAGTEVSALLGRMPS 262
Query: 804 AVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSR 863
AVGYQPTLAEEMG LQERI+ST+ G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR
Sbjct: 263 AVGYQPTLAEEMGVLQERITSTQKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSR 322
Query: 864 QIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
QIAELGIYPA+DPL+S S+QLDP I+G+EHY A V+ LQ+YKELKD
Sbjct: 323 QIAELGIYPAVDPLDSTSRQLDPNIIGQEHYDTARAVQNTLQRYKELKD 371
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 145/332 (43%), Gaps = 26/332 (7%)
Query: 172 DDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGI 231
D LK T+ T ++PVG LGR+++ G+ +DN K+R ++ + AP
Sbjct: 59 DGLKRQTE---VVSTGDAIQVPVGTATLGRVMDVLGKPVDNAGPVESKDRWSIHRPAPAF 115
Query: 232 MDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIY 290
++ E L TGIK ID + P KG + + G GKT ++ I N + ++
Sbjct: 116 DEQAGSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVF 175
Query: 291 VCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQD 350
+G++ + +++K N +D +V + + TG T+ E+FRD G+D
Sbjct: 176 AGVGERTREGNDFYHEMKESNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRD 235
Query: 351 CLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIF 410
L+ D++ ++ A ++S LL R P V Y L E + +++I
Sbjct: 236 VLMFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERIT 282
Query: 411 NKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR- 469
+ G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 283 STQKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQ 342
Query: 470 ----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + ++ L +Y+EL+
Sbjct: 343 LDPNIIGQEHYDTARA----VQNTLQRYKELK 370
>gi|359785630|ref|ZP_09288777.1| F0F1 ATP synthase subunit beta [Halomonas sp. GFAJ-1]
gi|359296863|gb|EHK61104.1| F0F1 ATP synthase subunit beta [Halomonas sp. GFAJ-1]
Length = 459
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 247/356 (69%), Positives = 297/356 (83%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + + N +I +VQQQ+G+ +VRTIA G+T G+KR V TG I
Sbjct: 15 VEFPRDSVPKVYDALKVSNAETILEVQQQLGDGVVRTIAMGSTEGLKRGLDVTSTGAAIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID G+I +++ PIH P +++Q +N +LETGIKVIDL+
Sbjct: 75 VPVGKETLGRIMNVLGEPIDEAGDIGEQERMPIHRKAPSYADQAASNELLETGIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGVGERTREGNDFYHEMTES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NV+DKV+L+YGQMNEP GNRLRVALTGL+IAE+FR+ G+DVLLF+DNIYR+TLAGTEVSA
Sbjct: 195 NVIDKVALVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF+HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFSHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VL+R IAELGIYPAIDPL+S S+QLDP +VGEEHY A V+ LQ+YKELKD
Sbjct: 315 ATVVLARSIAELGIYPAIDPLDSTSRQLDPLVVGEEHYNTARGVQNVLQRYKELKD 370
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 144/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG E LGRI+N GE ID + R + + AP D+
Sbjct: 58 EGLKRGLDVTSTGAAISVPVGKETLGRIMNVLGEPIDEAGDIGEQERMPIHRKAPSYADQ 117
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ NE L TGIK ID + P KG + + G GKT ++ I N ++ ++ +
Sbjct: 118 AASNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGV 177
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ N +D +V + + TG TI E FRD G+D L+
Sbjct: 178 GERTREGNDFYHEMTESNVIDKVALVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLL 237
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 238 FVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTK 284
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P S D + L ++ PAI+ S SR
Sbjct: 285 TGSITSVQAVYVPADDLTDPSPATTFSHLDATVVLARSIAELGIYPAIDPLDSTSRQLDP 344
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 345 LVVGEEHYNTARG----VQNVLQRYKELK 369
>gi|92115399|ref|YP_575327.1| F0F1 ATP synthase subunit beta [Chromohalobacter salexigens DSM
3043]
gi|118573521|sp|Q1QSD0.1|ATPB_CHRSD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|91798489|gb|ABE60628.1| ATP synthase F1 subcomplex beta subunit [Chromohalobacter
salexigens DSM 3043]
Length = 458
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 248/356 (69%), Positives = 294/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + + + + +I +VQQQ+G+ +VR IA G T G+KR VV++G I
Sbjct: 15 VEFPRDAVPKVYDALKVSDTETILEVQQQLGDGVVRAIAMGTTEGLKRGLDVVNSGSAIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID GEI ++ PIH P ++ Q +N +LETGIKVIDL+
Sbjct: 75 VPVGKATLGRIMNVLGEPIDEAGEIGEDERMPIHRKAPSYAEQAASNELLETGIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM+ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGVGERTREGNDFYHEMQES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL+IAE+FR+ G+DVLLF+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDDGRDVLLFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF+HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFSHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VL+R IAELGIYPAIDPL+S S+QLDP VGEEHY A V+ LQ+YKELKD
Sbjct: 315 ATVVLARSIAELGIYPAIDPLDSTSRQLDPLTVGEEHYNTARGVQGVLQRYKELKD 370
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 146/336 (43%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + + L +G + +PVG LGRI+N GE ID + R + +
Sbjct: 51 AIAMGTTEGLKRGLDVVNSGSAISVPVGKATLGRIMNVLGEPIDEAGEIGEDERMPIHRK 110
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV- 286
AP ++ + NE L TGIK ID + P KG + + G GKT ++ I N ++
Sbjct: 111 APSYAEQAASNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHSG 170
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + ++++ N +D +V + + TG TI E FRD
Sbjct: 171 YSVFAGVGERTREGNDFYHEMQESNVLDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRD 230
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L+ D++ ++ A ++S LL R P V Y L E + +
Sbjct: 231 DGRDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------Q 277
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P S D + L ++ PAI+ S
Sbjct: 278 ERITSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDATVVLARSIAELGIYPAIDPLDS 337
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR G Y + + G +L +Y+EL+
Sbjct: 338 TSRQLDPLTVGEEHYNTARGVQG----VLQRYKELK 369
>gi|161830152|ref|YP_001597761.1| F0F1 ATP synthase subunit beta [Coxiella burnetii RSA 331]
gi|189081330|sp|A9NBD0.1|ATPB_COXBR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|161762019|gb|ABX77661.1| ATP synthase F1, beta subunit [Coxiella burnetii RSA 331]
Length = 461
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 250/339 (73%), Positives = 292/339 (86%), Gaps = 1/339 (0%)
Query: 574 KNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGD 633
+NN+++ +VQQQ+G+ +VRTIA G+T G+KR+ V +T KPI PVG TLGRI+NVLG+
Sbjct: 37 ENNLTL-EVQQQLGDGVVRTIAMGSTEGLKRDIAVKNTEKPIEVPVGKETLGRIMNVLGE 95
Query: 634 PIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGV 693
PID G INSK+K PIH P F Q +LETGIKV+DLLCPF KGGK+GLFGGAGV
Sbjct: 96 PIDELGPINSKEKLPIHRPAPSFIEQSGTTELLETGIKVVDLLCPFAKGGKVGLFGGAGV 155
Query: 694 GKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPS 753
GKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMKESNVLDKV+L+YGQMNEP
Sbjct: 156 GKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKVALVYGQMNEPP 215
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRV LTGL++AE FR+ G+DVLLFIDNI+R+TLAG EVSA+LGR PSAVGYQPTLAE
Sbjct: 216 GNRLRVGLTGLTLAEAFRDEGRDVLLFIDNIFRYTLAGVEVSALLGRMPSAVGYQPTLAE 275
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAE GIYPA
Sbjct: 276 EMGALQERITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAERGIYPA 335
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IDPL+S S+QLDP I+GEEHY+VA V+ LQ+Y+ELKD
Sbjct: 336 IDPLDSTSRQLDPLIIGEEHYRVARGVQETLQRYEELKD 374
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 141/318 (44%), Gaps = 23/318 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
TEK E+PVG E LGRI+N GE ID K + + + AP +++ E L TGI
Sbjct: 73 TEKPIEVPVGKETLGRIMNVLGEPIDELGPINSKEKLPIHRPAPSFIEQSGTTELLETGI 132
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K +D + P KG + + G GKT ++ I N + ++ +G++ +
Sbjct: 133 KVVDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFY 192
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
+++K N +D +V + + TG T+ E FRD G+D L+ D++ ++ A
Sbjct: 193 HEMKESNVLDKVALVYGQMNEPPGNRLRVGLTGLTLAEAFRDEGRDVLLFIDNIFRYTLA 252
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P V Y L E + +++I + G++T+ +
Sbjct: 253 GVEVSALLGR------MPSAVGY-QPTLAEEMGAL------QERITSTKKGSITSIQAVY 299
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P + D + L + PAI+ S SR + G Y++
Sbjct: 300 VPADDLTDPSPATTFAHLDATVVLSRQIAERGIYPAIDPLDSTSRQLDPLIIGEEHYRVA 359
Query: 480 KKLSGDIRIMLAQYRELE 497
+ ++ L +Y EL+
Sbjct: 360 R----GVQETLQRYEELK 373
>gi|153206110|ref|ZP_01945373.1| ATP synthase F1, beta subunit [Coxiella burnetii 'MSU Goat Q177']
gi|165918717|ref|ZP_02218803.1| ATP synthase F1, beta subunit [Coxiella burnetii Q321]
gi|81839029|sp|Q83AF5.1|ATPB_COXBU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|189081329|sp|A9KBF7.1|ATPB_COXBN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|120577240|gb|EAX33864.1| ATP synthase F1, beta subunit [Coxiella burnetii 'MSU Goat Q177']
gi|165917545|gb|EDR36149.1| ATP synthase F1, beta subunit [Coxiella burnetii Q321]
Length = 461
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 250/339 (73%), Positives = 292/339 (86%), Gaps = 1/339 (0%)
Query: 574 KNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGD 633
+NN+++ +VQQQ+G+ +VRTIA G+T G+KR+ V +T KPI PVG TLGRI+NVLG+
Sbjct: 37 ENNLTL-EVQQQLGDGVVRTIAMGSTEGLKRDIAVKNTEKPIEVPVGKETLGRIMNVLGE 95
Query: 634 PIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGV 693
PID G INSK+K PIH P F Q +LETGIKV+DLLCPF KGGK+GLFGGAGV
Sbjct: 96 PIDELGPINSKEKLPIHRPAPSFIEQSGATELLETGIKVVDLLCPFAKGGKVGLFGGAGV 155
Query: 694 GKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPS 753
GKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMKESNVLDKV+L+YGQMNEP
Sbjct: 156 GKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKVALVYGQMNEPP 215
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRV LTGL++AE FR+ G+DVLLFIDNI+R+TLAG EVSA+LGR PSAVGYQPTLAE
Sbjct: 216 GNRLRVGLTGLTLAEAFRDEGRDVLLFIDNIFRYTLAGVEVSALLGRMPSAVGYQPTLAE 275
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAE GIYPA
Sbjct: 276 EMGALQERITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAERGIYPA 335
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IDPL+S S+QLDP I+GEEHY+VA V+ LQ+Y+ELKD
Sbjct: 336 IDPLDSTSRQLDPLIIGEEHYRVARGVQETLQRYEELKD 374
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 141/318 (44%), Gaps = 23/318 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
TEK E+PVG E LGRI+N GE ID K + + + AP +++ E L TGI
Sbjct: 73 TEKPIEVPVGKETLGRIMNVLGEPIDELGPINSKEKLPIHRPAPSFIEQSGATELLETGI 132
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K +D + P KG + + G GKT ++ I N + ++ +G++ +
Sbjct: 133 KVVDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFY 192
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
+++K N +D +V + + TG T+ E FRD G+D L+ D++ ++ A
Sbjct: 193 HEMKESNVLDKVALVYGQMNEPPGNRLRVGLTGLTLAEAFRDEGRDVLLFIDNIFRYTLA 252
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P V Y L E + +++I + G++T+ +
Sbjct: 253 GVEVSALLGR------MPSAVGY-QPTLAEEMGAL------QERITSTKKGSITSIQAVY 299
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P + D + L + PAI+ S SR + G Y++
Sbjct: 300 VPADDLTDPSPATTFAHLDATVVLSRQIAERGIYPAIDPLDSTSRQLDPLIIGEEHYRVA 359
Query: 480 KKLSGDIRIMLAQYRELE 497
+ ++ L +Y EL+
Sbjct: 360 R----GVQETLQRYEELK 373
>gi|448746057|ref|ZP_21727727.1| ATPase, F1 complex, beta subunit [Halomonas titanicae BH1]
gi|445566785|gb|ELY22891.1| ATPase, F1 complex, beta subunit [Halomonas titanicae BH1]
Length = 459
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 247/356 (69%), Positives = 296/356 (83%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + + + +I +VQQQ+G+ +VRTIA G+T G+KR V TG I
Sbjct: 15 VEFPRDSVPKVYDALKVSDVETILEVQQQLGDGVVRTIAMGSTEGLKRGMDVTSTGAAIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID G I +++ PIH P +++Q +N +LETGIKVIDL+
Sbjct: 75 VPVGKETLGRIMNVLGEPIDEAGPIGEQERMPIHRKAPSYADQAASNELLETGIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGVGERTREGNDFYHEMTES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NV+DKVSL+YGQMNEP GNRLRVALTGL+IAE+FR+ G+DVLLF+DNIYR+TLAGTEVSA
Sbjct: 195 NVIDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF+HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFSHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VL+R IAELGIYPAIDPL+S S+QLDP +VGEEHY A V+ LQ+YKELKD
Sbjct: 315 ATVVLARSIAELGIYPAIDPLDSTSRQLDPLVVGEEHYATARGVQNVLQRYKELKD 370
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 144/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG E LGRI+N GE ID + R + + AP D+
Sbjct: 58 EGLKRGMDVTSTGAAISVPVGKETLGRIMNVLGEPIDEAGPIGEQERMPIHRKAPSYADQ 117
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ NE L TGIK ID + P KG + + G GKT ++ I N ++ ++ +
Sbjct: 118 AASNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGV 177
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ N +D +V + + TG TI E FRD G+D L+
Sbjct: 178 GERTREGNDFYHEMTESNVIDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLL 237
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 238 FVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTK 284
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P S D + L ++ PAI+ S SR
Sbjct: 285 TGSITSVQAVYVPADDLTDPSPATTFSHLDATVVLARSIAELGIYPAIDPLDSTSRQLDP 344
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 345 LVVGEEHYATARG----VQNVLQRYKELK 369
>gi|209363699|ref|YP_001423602.2| F0F1 ATP synthase subunit beta [Coxiella burnetii Dugway 5J108-111]
gi|212211723|ref|YP_002302659.1| F0F1 ATP synthase subunit beta [Coxiella burnetii CbuG_Q212]
gi|212217738|ref|YP_002304525.1| F0F1 ATP synthase subunit beta [Coxiella burnetii CbuK_Q154]
gi|215919300|ref|NP_820921.2| ATP synthase F0F1 subunit beta [Coxiella burnetii RSA 493]
gi|206584185|gb|AAO91435.2| ATP synthase beta chain [Coxiella burnetii RSA 493]
gi|207081632|gb|ABS77940.2| ATP synthase beta chain [Coxiella burnetii Dugway 5J108-111]
gi|212010133|gb|ACJ17514.1| ATP synthase beta chain [Coxiella burnetii CbuG_Q212]
gi|212012000|gb|ACJ19380.1| ATP synthase beta chain [Coxiella burnetii CbuK_Q154]
Length = 483
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 250/339 (73%), Positives = 292/339 (86%), Gaps = 1/339 (0%)
Query: 574 KNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGD 633
+NN+++ +VQQQ+G+ +VRTIA G+T G+KR+ V +T KPI PVG TLGRI+NVLG+
Sbjct: 59 ENNLTL-EVQQQLGDGVVRTIAMGSTEGLKRDIAVKNTEKPIEVPVGKETLGRIMNVLGE 117
Query: 634 PIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGV 693
PID G INSK+K PIH P F Q +LETGIKV+DLLCPF KGGK+GLFGGAGV
Sbjct: 118 PIDELGPINSKEKLPIHRPAPSFIEQSGATELLETGIKVVDLLCPFAKGGKVGLFGGAGV 177
Query: 694 GKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPS 753
GKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMKESNVLDKV+L+YGQMNEP
Sbjct: 178 GKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKVALVYGQMNEPP 237
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRV LTGL++AE FR+ G+DVLLFIDNI+R+TLAG EVSA+LGR PSAVGYQPTLAE
Sbjct: 238 GNRLRVGLTGLTLAEAFRDEGRDVLLFIDNIFRYTLAGVEVSALLGRMPSAVGYQPTLAE 297
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAE GIYPA
Sbjct: 298 EMGALQERITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAERGIYPA 357
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IDPL+S S+QLDP I+GEEHY+VA V+ LQ+Y+ELKD
Sbjct: 358 IDPLDSTSRQLDPLIIGEEHYRVARGVQETLQRYEELKD 396
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 141/318 (44%), Gaps = 23/318 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
TEK E+PVG E LGRI+N GE ID K + + + AP +++ E L TGI
Sbjct: 95 TEKPIEVPVGKETLGRIMNVLGEPIDELGPINSKEKLPIHRPAPSFIEQSGATELLETGI 154
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K +D + P KG + + G GKT ++ I N + ++ +G++ +
Sbjct: 155 KVVDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFY 214
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
+++K N +D +V + + TG T+ E FRD G+D L+ D++ ++ A
Sbjct: 215 HEMKESNVLDKVALVYGQMNEPPGNRLRVGLTGLTLAEAFRDEGRDVLLFIDNIFRYTLA 274
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P V Y L E + +++I + G++T+ +
Sbjct: 275 GVEVSALLGR------MPSAVGY-QPTLAEEMGAL------QERITSTKKGSITSIQAVY 321
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P + D + L + PAI+ S SR + G Y++
Sbjct: 322 VPADDLTDPSPATTFAHLDATVVLSRQIAERGIYPAIDPLDSTSRQLDPLIIGEEHYRVA 381
Query: 480 KKLSGDIRIMLAQYRELE 497
+ ++ L +Y EL+
Sbjct: 382 R----GVQETLQRYEELK 395
>gi|89092247|ref|ZP_01165201.1| ATP synthase subunit B [Neptuniibacter caesariensis]
gi|89083335|gb|EAR62553.1| ATP synthase subunit B [Oceanospirillum sp. MED92]
Length = 458
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 244/359 (67%), Positives = 297/359 (82%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E ++ K + + + N +VQQQ+G+ +VR IA G T G+ R V +TG
Sbjct: 13 VVDVEFPRDSVPKVYDALTVTKNGLTLEVQQQLGDGVVRAIAMGQTEGVSRGQDVANTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
P+ PVG TLGRI++VLG+PID GEI +++ PIH P + Q +N +LETGIKVI
Sbjct: 73 PVSVPVGTATLGRIMDVLGNPIDECGEIGEEERMPIHRKAPSYDEQAASNELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFY+EM
Sbjct: 133 DLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYYEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTE 793
KESNVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTE
Sbjct: 193 KESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTE 252
Query: 794 VSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFT 853
VSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF+
Sbjct: 253 VSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFS 312
Query: 854 HLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSRQIAELGIYPA+DPL+S S+QLDP ++G EHY++A V+ LQ+YKELKD
Sbjct: 313 HLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPLVIGTEHYEIARNVQGVLQRYKELKD 371
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 148/336 (44%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + + +++GQ T +PVG LGRI++ G ID + + R + +
Sbjct: 52 AIAMGQTEGVSRGQDVANTGAPVSVPVGTATLGRIMDVLGNPIDECGEIGEEERMPIHRK 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP ++ + NE L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 112 APSYDEQAASNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 171
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + ++K N +D +V + + TG T+ E FRD
Sbjct: 172 FSVFAGVGERTREGNDFYYEMKESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRD 231
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L+ D++ ++ A ++S LL R P V Y L E + +
Sbjct: 232 EGRDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------Q 278
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P S D + L + PA++ S
Sbjct: 279 ERITSTKTGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRQIAELGIYPAVDPLDS 338
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y+I + + G +L +Y+EL+
Sbjct: 339 TSRQLDPLVIGTEHYEIARNVQG----VLQRYKELK 370
>gi|374851493|dbj|BAL54452.1| F-type H+-transporting ATPase subunit beta [uncultured gamma
proteobacterium]
Length = 454
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 242/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRT+A G+T+G++R V +TG PI PVG TLGRI+NVLG+PID KG
Sbjct: 34 EVQQQLGDGVVRTVAMGSTDGLRRGLPVANTGAPISVPVGKETLGRIMNVLGEPIDEKGP 93
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I K++ PIH P + Q+ +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 94 IGEKERWPIHRKAPSYEEQVPATELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 153
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM+ES VLDKV+L+YGQMNEP GNRLRVA
Sbjct: 154 ELIRNIAIEHAGYSVFAGVGERTREGNDFYHEMQESKVLDKVALVYGQMNEPPGNRLRVA 213
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL+IAE FR+ G+DVLLFIDNIYR+TLAG EVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 214 LTGLTIAERFRDEGRDVLLFIDNIYRYTLAGVEVSALLGRMPSAVGYQPTLAEEMGMLQE 273
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+ST+ G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELGIYPA+DPL+S
Sbjct: 274 RITSTRTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDST 333
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP I+G EHY+VA V+ LQ+YKEL+D
Sbjct: 334 SRQLDPLIIGHEHYEVARRVQATLQRYKELRD 365
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 145/334 (43%), Gaps = 23/334 (6%)
Query: 169 VLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIA 228
V + L +G T +PVG E LGRI+N GE ID K K R + + A
Sbjct: 47 VAMGSTDGLRRGLPVANTGAPISVPVGKETLGRIMNVLGEPIDEKGPIGEKERWPIHRKA 106
Query: 229 PGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-I 287
P ++ E L TGIK ID + P KG + + G GKT ++ I N ++
Sbjct: 107 PSYEEQVPATELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHAGY 166
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
++ +G++ + ++++ +D +V + + TG TI E FRD
Sbjct: 167 SVFAGVGERTREGNDFYHEMQESKVLDKVALVYGQMNEPPGNRLRVALTGLTIAERFRDE 226
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D L+ D++ ++ A ++S LL R P V Y + + + + ++
Sbjct: 227 GRDVLLFIDNIYRYTLAGVEVSALLGR------MPSAVGY-------QPTLAEEMGMLQE 273
Query: 408 KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSV 467
+I + G++T+ + D+T P + D + L + PA++ S
Sbjct: 274 RITSTRTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDST 333
Query: 468 SR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
SR + G Y++ ++ ++ L +Y+EL
Sbjct: 334 SRQLDPLIIGHEHYEVARR----VQATLQRYKEL 363
>gi|352105489|ref|ZP_08960804.1| F0F1 ATP synthase subunit beta [Halomonas sp. HAL1]
gi|350598362|gb|EHA14482.1| F0F1 ATP synthase subunit beta [Halomonas sp. HAL1]
Length = 459
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 246/356 (69%), Positives = 295/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + + + +I +VQQQ+G+ +VRTIA G+T G+KR TG I
Sbjct: 15 VEFPRDSVPKVYDALKVSDVETILEVQQQLGDGVVRTIAMGSTEGLKRGMATTSTGAAIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID G I +++ PIH P +++Q +N +LETGIKVIDL+
Sbjct: 75 VPVGKETLGRIMNVLGEPIDEAGPIGEQERMPIHRKAPGYADQAASNELLETGIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGVGERTREGNDFYHEMTES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NV+DKVSL+YGQMNEP GNRLRVALTGL+IAE+FR+ G+DVLLF+DNIYR+TLAGTEVSA
Sbjct: 195 NVIDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF+HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFSHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VL+R IAELGIYPAIDPL+S S+QLDP +VGEEHY A V+ LQ+YKELKD
Sbjct: 315 ATVVLARSIAELGIYPAIDPLDSTSRQLDPLVVGEEHYATARGVQNVLQRYKELKD 370
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 145/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG E LGRI+N GE ID + R + + APG D+
Sbjct: 58 EGLKRGMATTSTGAAISVPVGKETLGRIMNVLGEPIDEAGPIGEQERMPIHRKAPGYADQ 117
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ NE L TGIK ID + P KG + + G GKT ++ I N ++ ++ +
Sbjct: 118 AASNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGV 177
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ N +D +V + + TG TI E FRD G+D L+
Sbjct: 178 GERTREGNDFYHEMTESNVIDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLL 237
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 238 FVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTK 284
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P S D + L ++ PAI+ S SR
Sbjct: 285 TGSITSVQAVYVPADDLTDPSPATTFSHLDATVVLARSIAELGIYPAIDPLDSTSRQLDP 344
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 345 LVVGEEHYATARG----VQNVLQRYKELK 369
>gi|53802691|ref|YP_112553.1| ATP synthase F0F1 subunit beta [Methylococcus capsulatus str. Bath]
gi|81823727|sp|Q60CR4.1|ATPB_METCA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|53756452|gb|AAU90743.1| ATP synthase F1, beta subunit [Methylococcus capsulatus str. Bath]
Length = 460
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 244/332 (73%), Positives = 285/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VR IA G+T+G++R V +TG PI PVG TLGRI+NVLGDPID KG
Sbjct: 40 EVQQQLGDGVVRCIAMGSTDGVRRGVTVTNTGAPISVPVGTETLGRIMNVLGDPIDEKGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I K++ IH P + +Q N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEKERWGIHRKAPSYQDQAAANELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMKESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKVSLVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL+IAE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQP LAEEMG LQE
Sbjct: 220 LTGLTIAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPNLAEEMGILQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELGIYPA+DPL+S
Sbjct: 280 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G EHY+ V+ LQ+YKEL+D
Sbjct: 340 SRQLDPLVIGHEHYETTRRVQSTLQRYKELRD 371
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 137/311 (44%), Gaps = 23/311 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG E LGRI+N G+ ID K K R + + AP D+ + NE L TGIK ID +
Sbjct: 76 VPVGTETLGRIMNVLGDPIDEKGPIGEKERWGIHRKAPSYQDQAAANELLETGIKVIDLI 135
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N + ++ +G++ + +++K
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKES 195
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
N +D +V + + TG TI E FRD G+D L+ D++ ++ A ++S
Sbjct: 196 NVLDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 255
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P + ++ L ER I + G++T+ + D+
Sbjct: 256 LLGRMPSAVGYQPNLAEEMGILQER-------------ITSTKTGSITSIQAVYVPADDL 302
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P + D + L + PA++ S SR V G Y+ ++
Sbjct: 303 TDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPLVIGHEHYETTRR---- 358
Query: 486 IRIMLAQYREL 496
++ L +Y+EL
Sbjct: 359 VQSTLQRYKEL 369
>gi|359394594|ref|ZP_09187647.1| ATP synthase subunit beta [Halomonas boliviensis LC1]
gi|357971841|gb|EHJ94286.1| ATP synthase subunit beta [Halomonas boliviensis LC1]
Length = 459
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 246/356 (69%), Positives = 295/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + + + +I +VQQQ+G+ +VRTIA G+T G+KR TG I
Sbjct: 15 VEFPRDSVPKVYDALKVSDVETILEVQQQLGDGVVRTIAMGSTEGLKRGMDTTSTGAAIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID G I +++ PIH P +++Q +N +LETGIKVIDL+
Sbjct: 75 VPVGKETLGRIMNVLGEPIDEAGPIGEQERMPIHRKAPGYADQAASNELLETGIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGVGERTREGNDFYHEMTES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NV+DKVSL+YGQMNEP GNRLRVALTGL+IAE+FR+ G+DVLLF+DNIYR+TLAGTEVSA
Sbjct: 195 NVIDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF+HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFSHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VL+R IAELGIYPAIDPL+S S+QLDP +VGEEHY A V+ LQ+YKELKD
Sbjct: 315 ATVVLARSIAELGIYPAIDPLDSTSRQLDPLVVGEEHYATARGVQNVLQRYKELKD 370
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 145/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG E LGRI+N GE ID + R + + APG D+
Sbjct: 58 EGLKRGMDTTSTGAAISVPVGKETLGRIMNVLGEPIDEAGPIGEQERMPIHRKAPGYADQ 117
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ NE L TGIK ID + P KG + + G GKT ++ I N ++ ++ +
Sbjct: 118 AASNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGV 177
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ N +D +V + + TG TI E FRD G+D L+
Sbjct: 178 GERTREGNDFYHEMTESNVIDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLL 237
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 238 FVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTK 284
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P S D + L ++ PAI+ S SR
Sbjct: 285 TGSITSVQAVYVPADDLTDPSPATTFSHLDATVVLARSIAELGIYPAIDPLDSTSRQLDP 344
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 345 LVVGEEHYATARG----VQNVLQRYKELK 369
>gi|333909875|ref|YP_004483461.1| ATP synthase subunit beta [Marinomonas posidonica IVIA-Po-181]
gi|333479881|gb|AEF56542.1| ATP synthase subunit beta [Marinomonas posidonica IVIA-Po-181]
Length = 458
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 296/356 (83%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E N+ K + + ++ + +VQQQ+G+ +VRTIA G+T+G+KR +V +TG+P+
Sbjct: 16 VEFPRDNVPKVYDALTIEGKELVLEVQQQLGDGVVRTIAMGSTDGMKRGLVVTNTGQPVS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG+PID KG I + + IH P + Q N +LETGIKVIDL+
Sbjct: 76 VPVGTQTLGRIMDVLGNPIDEKGPIGEEARWSIHRSAPSYDEQASGNELLETGIKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 196 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF+HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFSHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPAIDPL+S S+QLDP ++G+EHY VA V+ LQ+YKELKD
Sbjct: 316 ATVVLSRDIAALGIYPAIDPLDSTSRQLDPLVIGQEHYDVARGVQMVLQRYKELKD 371
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
+ +G T + +PVG + LGRI++ G ID K + R ++ + AP ++
Sbjct: 60 GMKRGLVVTNTGQPVSVPVGTQTLGRIMDVLGNPIDEKGPIGEEARWSIHRSAPSYDEQA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S NE L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 120 SGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 180 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P S D + L ++ PAI+ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPSPATTFSHLDATVVLSRDIAALGIYPAIDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++++L +Y+EL+
Sbjct: 347 VIGQEHYDVARG----VQMVLQRYKELK 370
>gi|374623120|ref|ZP_09695636.1| F0F1 ATP synthase subunit beta [Ectothiorhodospira sp. PHS-1]
gi|373942237|gb|EHQ52782.1| F0F1 ATP synthase subunit beta [Ectothiorhodospira sp. PHS-1]
Length = 460
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 287/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G+++G++R V ++GKPI PVG TLGRI++VLG P+DN G+
Sbjct: 40 EVQQQLGDGIVRTIAMGSSDGLRRGIKVTNSGKPISVPVGKATLGRIMDVLGQPVDNAGD 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ + + IH PP + Q + +LETGIKVIDLLCPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 VKADEHWSIHRAPPSYEEQAGSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVL+FIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEFFRDEGRDVLMFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELGIYPA+DPL+S
Sbjct: 280 RITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 340 SRQLDPLVIGQEHYDTARAVQNTLQRYKELKD 371
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 139/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K + K +PVG LGRI++ G+ +DN ++ + P ++
Sbjct: 60 GLRRGIKVTNSGKPISVPVGKATLGRIMDVLGQPVDNAGDVKADEHWSIHRAPPSYEEQA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 120 GSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G+D L+
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLMF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKK 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 287 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ L +Y+EL+
Sbjct: 347 VIGQEHYDTARA----VQNTLQRYKELK 370
>gi|15603359|ref|NP_246433.1| F0F1 ATP synthase subunit beta [Pasteurella multocida subsp.
multocida str. Pm70]
gi|378775345|ref|YP_005177588.1| ATP synthase subunit beta [Pasteurella multocida 36950]
gi|383311348|ref|YP_005364158.1| ATP synthase subunit beta [Pasteurella multocida subsp. multocida
str. HN06]
gi|386835366|ref|YP_006240683.1| ATP synthase F1 subunit beta [Pasteurella multocida subsp.
multocida str. 3480]
gi|417854293|ref|ZP_12499611.1| F0F1 ATP synthase subunit beta [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|425064215|ref|ZP_18467340.1| ATP synthase beta chain [Pasteurella multocida subsp. gallicida
X73]
gi|425066377|ref|ZP_18469497.1| ATP synthase beta chain [Pasteurella multocida subsp. gallicida
P1059]
gi|17372630|sp|Q9CKW1.1|ATPB_PASMU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|12721878|gb|AAK03578.1| AtpD [Pasteurella multocida subsp. multocida str. Pm70]
gi|338218256|gb|EGP04038.1| F0F1 ATP synthase subunit beta [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|356597893|gb|AET16619.1| ATP synthase subunit beta [Pasteurella multocida 36950]
gi|380872620|gb|AFF24987.1| ATP synthase subunit beta [Pasteurella multocida subsp. multocida
str. HN06]
gi|385202069|gb|AFI46924.1| ATP synthase F1, beta subunit [Pasteurella multocida subsp.
multocida str. 3480]
gi|404381592|gb|EJZ78062.1| ATP synthase beta chain [Pasteurella multocida subsp. gallicida
X73]
gi|404381809|gb|EJZ78276.1| ATP synthase beta chain [Pasteurella multocida subsp. gallicida
P1059]
Length = 457
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 248/356 (69%), Positives = 297/356 (83%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + +N++ + + +VQQQ+G +VR IA G+++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALNVETGLVL-EVQQQLGGGVVRCIAMGSSDGLKRGLSVTNTNNPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +GEI +++ IH PP + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEQGEIGAEENWSIHRAPPSYEEQSNSTELLETGIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPLES S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLESTSRQLDPLVVGEEHYNVARGVQTTLQRYKELKD 370
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 142/327 (43%), Gaps = 23/327 (7%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G T +PVG + LGRI+N GE ID + + + ++ + P ++ +
Sbjct: 60 LKRGLSVTNTNNPISVPVGTKTLGRIMNVLGEPIDEQGEIGAEENWSIHRAPPSYEEQSN 119
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK ID + P KG + + G GKT ++ I N + ++ +G+
Sbjct: 120 STELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGE 179
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 180 RTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFV 239
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P V Y L E + +++I + G
Sbjct: 240 DNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKTG 286
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L + + PA++ S SR V
Sbjct: 287 SITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLESTSRQLDPLV 346
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y + + ++ L +Y+EL+
Sbjct: 347 VGEEHYNVAR----GVQTTLQRYKELK 369
>gi|402701171|ref|ZP_10849150.1| F0F1 ATP synthase subunit beta [Pseudomonas fragi A22]
Length = 459
Score = 524 bits (1349), Expect = e-145, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 288/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V DTG I PVG TLGRI++VLG+PID G
Sbjct: 41 EVQQQLGDGVVRTIAMGSTEGLKRGLEVTDTGAAISVPVGKATLGRIMDVLGNPIDEAGP 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+++++ IH P F++Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IDTEERWGIHRPAPSFADQAGGNDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA+EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 281 RITSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 341 SRQLDPMVIGQEHYDTARGVQYVLQRYKELKD 372
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 169/418 (40%), Gaps = 32/418 (7%)
Query: 117 IIRFAYNIEYDYFDPRCLNQTLNIKFANNTVLSGQINGTTGYEEAAAQGFVAVLIDDLKN 176
II ++E+ + + L ++ A T L Q G A G +
Sbjct: 9 IIGAVIDVEFPRENVPSIYNALKVQSAAGTTLEVQQQLGDGVVRTIAMG-------STEG 61
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G + T +PVG LGRI++ G ID + R + + AP D+
Sbjct: 62 LKRGLEVTDTGAAISVPVGKATLGRIMDVLGNPIDEAGPIDTEERWGIHRPAPSFADQAG 121
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +G+
Sbjct: 122 GNDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGVGE 181
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 182 RTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFV 241
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + L E + +++I + NG
Sbjct: 242 DNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGTL------QERITSTKNG 288
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L ++ + PA++ S SR V
Sbjct: 289 SITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMV 348
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQ 526
G Y + ++ +L +Y+EL+ +L V K + KI + Q
Sbjct: 349 IGQEHYDTARG----VQYVLQRYKELKDIIAILGMDELSEVDKQLVSRARKIQRFLSQ 402
>gi|406943055|gb|EKD75140.1| hypothetical protein ACD_44C00219G0004 [uncultured bacterium]
Length = 457
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 247/359 (68%), Positives = 299/359 (83%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E +I + + ++ I +VQQQ+G+ +VRTIA G+T+G++R V +TG+
Sbjct: 12 VVDVEFPHGHIPGIYDALEIEGTDLILEVQQQMGDGVVRTIALGSTDGMRRGLKVKNTGE 71
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG PID G + +++ IH P F++Q NN +LETGIKVI
Sbjct: 72 PIRVPVGKKTLGRIMDVLGRPIDELGPVGAEELWSIHRSAPAFTDQAVNNQLLETGIKVI 131
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM
Sbjct: 132 DLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEM 191
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTE 793
KES+VLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAG E
Sbjct: 192 KESSVLDKVSLVYGQMNEPPGNRLRVALTGLTVAEKFRDEGRDVLLFIDNIYRYTLAGVE 251
Query: 794 VSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFT 853
VSA+LGR PSAVGYQPTLA EMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF
Sbjct: 252 VSALLGRMPSAVGYQPTLAAEMGALQERITSTKTGSITSVQAVYVPADDLTDPSPATTFA 311
Query: 854 HLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSRQIAELGIYPAIDPL+S S+QLDP ++G+EHY VA +V+ LQ+YKELKD
Sbjct: 312 HLDATVVLSRQIAELGIYPAIDPLDSTSRQLDPLVIGQEHYDVARKVQGTLQRYKELKD 370
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
+ +G K T + +PVG + LGRI++ G ID + ++ + AP D+
Sbjct: 59 GMRRGLKVKNTGEPIRVPVGKKTLGRIMDVLGRPIDELGPVGAEELWSIHRSAPAFTDQA 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 VNNQLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K + +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 ERTREGNDFYHEMKESSVLDKVSLVYGQMNEPPGNRLRVALTGLTVAEKFRDEGRDVLLF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + E + +++I +
Sbjct: 239 IDNIYRYTLAGVEVSALLGR------MPSAVGYQPTLAAEMGAL-------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PAI+ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAIDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + +K+ G L +Y+EL+
Sbjct: 346 VIGQEHYDVARKVQG----TLQRYKELK 369
>gi|270158437|ref|ZP_06187094.1| ATP synthase F1 subunit beta [Legionella longbeachae D-4968]
gi|289166724|ref|YP_003456862.1| H+-transporting ATP synthase beta chain [Legionella longbeachae
NSW150]
gi|269990462|gb|EEZ96716.1| ATP synthase F1 subunit beta [Legionella longbeachae D-4968]
gi|288859897|emb|CBJ13883.1| putative H+-transporting ATP synthase beta chain [Legionella
longbeachae NSW150]
Length = 458
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 247/356 (69%), Positives = 292/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E N+ K + L + + +VQQQ+G+ +VRTIA G T G+KR +TG PI
Sbjct: 16 VEFPRDNVPKINDALKLVDGDLVFEVQQQLGDGVVRTIAMGTTEGLKRGLKAENTGDPIQ 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG P+D G I +++ IH PP + +Q + +LETGIKVIDLL
Sbjct: 76 VPVGKKTLGRIMDVLGRPVDEAGPIGAEEHWSIHRKPPTYEDQAGSQELLETGIKVIDLL 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMKES
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKES 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAG EVSA
Sbjct: 196 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGVEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGMLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSRQIAELGIYPA+DPL+S S+QLDP IVG+EHY A V+ LQ+YKELKD
Sbjct: 316 ATVVLSRQIAELGIYPAVDPLDSTSRQLDPLIVGQEHYDTARRVQQTLQRYKELKD 371
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 142/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G K T ++PVG + LGRI++ G +D + ++ + P D+
Sbjct: 59 EGLKRGLKAENTGDPIQVPVGKKTLGRIMDVLGRPVDEAGPIGAEEHWSIHRKPPTYEDQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
E L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGSQELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 GERTREGNDFYHEMKESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 239 FVDNIYRYTLAGVEVSALLGR------MPSAVGY-------QPTLAEEMGMLQERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 286 TGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y ++ ++ L +Y+EL+
Sbjct: 346 LIVGQEHYDTARR----VQQTLQRYKELK 370
>gi|114322016|ref|YP_743699.1| F0F1 ATP synthase subunit beta [Alkalilimnicola ehrlichii MLHE-1]
gi|122310606|sp|Q0A4M8.1|ATPB_ALHEH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|114228410|gb|ABI58209.1| ATP synthase F1 subcomplex beta subunit [Alkalilimnicola ehrlichii
MLHE-1]
Length = 458
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 241/332 (72%), Positives = 288/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G+KR+ V TGKPI PVG TLGRI++VLG+P+D KG
Sbjct: 40 EVQQQLGDGVVRTIAMGSSDGLKRSEKVSATGKPISVPVGKGTLGRIMDVLGEPVDEKGA 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ ++++ IH P F+ Q +LETGIKVIDLLCPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 VETEERWGIHRSAPSFAEQAGGAELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIATEHAGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L+FIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 220 LTGLTMAEYFRDEGRDILMFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VL+R IAELGIYPA+DPL+S
Sbjct: 280 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLARGIAELGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY VA V+ LQ+YKEL+D
Sbjct: 340 SRQLDPLVVGEEHYNVARGVQGVLQRYKELRD 371
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 145/327 (44%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L + +K T K +PVG LGRI++ GE +D K + R + + AP ++
Sbjct: 60 GLKRSEKVSATGKPISVPVGKGTLGRIMDVLGEPVDEKGAVETEERWGIHRSAPSFAEQA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N ++ ++ +G
Sbjct: 120 GGAELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHAGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ EYFRD G+D L+
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDILMF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 240 IDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLARGIAELGIYPAVDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + + + G +L +Y+EL
Sbjct: 347 VVGEEHYNVARGVQG----VLQRYKEL 369
>gi|18033065|gb|AAL56974.1|AF326326_1 ATP synthase [Pasteurella multocida subsp. multocida]
gi|18033067|gb|AAL56975.1|AF326327_1 ATP synthase [Pasteurella multocida subsp. gallicida]
gi|18033069|gb|AAL56976.1|AF326328_1 ATP synthase [Pasteurella multocida subsp. gallicida]
gi|18033071|gb|AAL56977.1|AF326329_1 ATP synthase [Pasteurella multocida subsp. septica]
Length = 431
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 248/356 (69%), Positives = 297/356 (83%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + +N++ + + +VQQQ+G +VR IA G+++G+KR V +T PI
Sbjct: 5 VEFPQDAVPKVYDALNVETGLVL-EVQQQLGGGVVRCIAMGSSDGLKRGLSVTNTNNPIS 63
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +GEI +++ IH PP + Q + +LETGIKVIDL+
Sbjct: 64 VPVGTKTLGRIMNVLGEPIDEQGEIGAEENWSIHRAPPSYEEQSNSTELLETGIKVIDLV 123
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 124 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 183
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 184 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 243
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 244 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 303
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPLES S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 304 STVVLSRQIASLGIYPAVDPLESTSRQLDPLVVGEEHYNVARGVQTTLQRYKELKD 359
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 142/327 (43%), Gaps = 23/327 (7%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G T +PVG + LGRI+N GE ID + + + ++ + P ++ +
Sbjct: 49 LKRGLSVTNTNNPISVPVGTKTLGRIMNVLGEPIDEQGEIGAEENWSIHRAPPSYEEQSN 108
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK ID + P KG + + G GKT ++ I N + ++ +G+
Sbjct: 109 STELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGE 168
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 169 RTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFV 228
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P V Y L E + +++I + G
Sbjct: 229 DNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKTG 275
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L + + PA++ S SR V
Sbjct: 276 SITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLESTSRQLDPLV 335
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y + + ++ L +Y+EL+
Sbjct: 336 VGEEHYNVARG----VQTTLQRYKELK 358
>gi|152998457|ref|YP_001343292.1| F0F1 ATP synthase subunit beta [Marinomonas sp. MWYL1]
gi|190358234|sp|A6W3S8.1|ATPB2_MARMS RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
synthase F1 sector subunit beta 2; AltName:
Full=F-ATPase subunit beta 2
gi|150839381|gb|ABR73357.1| ATP synthase F1, beta subunit [Marinomonas sp. MWYL1]
Length = 458
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 244/359 (67%), Positives = 299/359 (83%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E ++ K + + ++ + +VQQQ+G+ IVRTIA G+T+GIKR +V +T K
Sbjct: 13 VMDVEFPRDSVPKVYDALTIEGKQLVLEVQQQLGDGIVRTIAMGSTDGIKRGLVVENTNK 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
P+ PVG TLGRI++VLG+PID KG I +++ IH P ++ Q +N +LETGIKVI
Sbjct: 73 PVSVPVGTKTLGRIMDVLGNPIDEKGPIGEEERWSIHRSAPSYAEQSSSNELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTE 793
+SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTE
Sbjct: 193 TDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTE 252
Query: 794 VSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFT 853
VSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF+
Sbjct: 253 VSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFS 312
Query: 854 HLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA LGIYPAIDPL+S S+QLDP ++G+EHY VA V+ LQ+YKELKD
Sbjct: 313 HLDATVVLSRDIASLGIYPAIDPLDSTSRQLDPLVIGQEHYDVARGVQMVLQRYKELKD 371
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 142/318 (44%), Gaps = 23/318 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T K +PVG + LGRI++ G ID K + R ++ + AP ++ S NE L TGI
Sbjct: 70 TNKPVSVPVGTKTLGRIMDVLGNPIDEKGPIGEEERWSIHRSAPSYAEQSSSNELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID + P KG + + G GKT ++ I N + ++ +G++ +
Sbjct: 130 KVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
+++ N +D +V + + TG T+ E FRD G+D L D++ ++ A
Sbjct: 190 HEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLA 249
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P + L E + +++I + G++T+ +
Sbjct: 250 GTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSVQAVY 296
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P S D + L ++ + PAI+ S SR V G Y +
Sbjct: 297 VPADDLTDPSPATTFSHLDATVVLSRDIASLGIYPAIDPLDSTSRQLDPLVIGQEHYDVA 356
Query: 480 KKLSGDIRIMLAQYRELE 497
+ ++++L +Y+EL+
Sbjct: 357 RG----VQMVLQRYKELK 370
>gi|350560208|ref|ZP_08929048.1| ATP synthase F1, beta subunit [Thioalkalivibrio thiocyanoxidans ARh
4]
gi|349782476|gb|EGZ36759.1| ATP synthase F1, beta subunit [Thioalkalivibrio thiocyanoxidans ARh
4]
Length = 459
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 244/349 (69%), Positives = 290/349 (83%)
Query: 564 IIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCT 623
+ + + + LK+ +VQQQ+G+ +VRTIA G+T+G+KR T VV TG I PVG T
Sbjct: 23 VPRVYEALRLKDLDLTLEVQQQLGDGVVRTIAMGSTDGLKRQTEVVATGNAIQVPVGTAT 82
Query: 624 LGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGG 683
LGR+++VLG P+DN G + + + IH P F Q + +LETGIKVIDLLCPF KGG
Sbjct: 83 LGRVMDVLGRPVDNAGPVEAPEHWSIHRAAPSFDEQAGSTELLETGIKVIDLLCPFAKGG 142
Query: 684 KIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVS 743
K+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMKESNVLDKV+
Sbjct: 143 KVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKVA 202
Query: 744 LIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPS 803
L+YGQMNEP GNRLRVALTGL++AE FR+ G+DVL+FIDNIYR+TLAGTEVSA+LGR PS
Sbjct: 203 LVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLMFIDNIYRYTLAGTEVSALLGRMPS 262
Query: 804 AVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSR 863
AVGYQPTLAEEMG LQERI+ST+ G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR
Sbjct: 263 AVGYQPTLAEEMGVLQERITSTQKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSR 322
Query: 864 QIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
QIAELGIYPA+DPL+S S+QLDP I+G EHY A V+ LQ+YKELKD
Sbjct: 323 QIAELGIYPAVDPLDSTSRQLDPNIIGHEHYDTARAVQNTLQRYKELKD 371
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 141/332 (42%), Gaps = 26/332 (7%)
Query: 172 DDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGI 231
D LK T+ T ++PVG LGR+++ G +DN ++ + AP
Sbjct: 59 DGLKRQTE---VVATGNAIQVPVGTATLGRVMDVLGRPVDNAGPVEAPEHWSIHRAAPSF 115
Query: 232 MDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIY 290
++ E L TGIK ID + P KG + + G GKT ++ I N + ++
Sbjct: 116 DEQAGSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVF 175
Query: 291 VCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQD 350
+G++ + +++K N +D +V + + TG T+ E+FRD G+D
Sbjct: 176 AGVGERTREGNDFYHEMKESNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRD 235
Query: 351 CLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIF 410
L+ D++ ++ A ++S LL R P V Y L E + +++I
Sbjct: 236 VLMFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERIT 282
Query: 411 NKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR- 469
+ G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 283 STQKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQ 342
Query: 470 ----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + ++ L +Y+EL+
Sbjct: 343 LDPNIIGHEHYDTARA----VQNTLQRYKELK 370
>gi|388544084|ref|ZP_10147373.1| F0F1 ATP synthase subunit beta [Pseudomonas sp. M47T1]
gi|388277912|gb|EIK97485.1| F0F1 ATP synthase subunit beta [Pseudomonas sp. M47T1]
Length = 458
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 242/356 (67%), Positives = 295/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ + +N++ + +VQQQ+G+ +VRTIA G+T G+KR V+DT PI
Sbjct: 16 VEFPRDSVPSIYSALNVQGAPTTLEVQQQLGDGVVRTIAMGSTEGLKRGLEVIDTKGPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG+PID G I +++ IH P F+ Q N++LETGIKVIDL+
Sbjct: 76 VPVGKATLGRIMDVLGNPIDEAGPIGEEERRGIHQPAPSFAEQAGGNDLLETGIKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIA+EH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVALTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGTLQERITSTKAGSITSVQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 316 ATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDTARGVQYVLQRYKELKD 371
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 143/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + T+ +PVG LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLEVIDTKGPISVPVGKATLGRIMDVLGNPIDEAGPIGEEERRGIHQPAPSFAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGTL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 AGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 346 LVIGQEHYDTARG----VQYVLQRYKELK 370
>gi|407717460|ref|YP_006838740.1| H(+)-transporting two-sector ATPase, F(1) subunit beta
[Cycloclasticus sp. P1]
gi|407257796|gb|AFT68237.1| H(+)-transporting two-sector ATPase, F(1) beta subunit
[Cycloclasticus sp. P1]
Length = 460
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 243/332 (73%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQIG+ +VRTIA G T+G+KR V +TG+ I PVG TLGRI+NVLG+PID KG
Sbjct: 40 EVQQQIGDGVVRTIAMGTTDGVKRGLDVTNTGEAIQVPVGTKTLGRIMNVLGEPIDEKGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q +N+ILETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWGIHRTAPSYEEQAASNDILETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR G DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQP LAEEMG QE
Sbjct: 220 LTGLTMAEKFRADGSDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPNLAEEMGVFQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+ST+ G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELGIYPAIDPL+S
Sbjct: 280 RITSTREGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAIDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++GEEHY+VA +V+ LQ+YKEL+D
Sbjct: 340 SRQLDPLVIGEEHYQVARDVQGTLQRYKELRD 371
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 152/358 (42%), Gaps = 29/358 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
+ +G T + ++PVG + LGRI+N GE ID K + R + + AP ++
Sbjct: 60 GVKRGLDVTNTGEAIQVPVGTKTLGRIMNVLGEPIDEKGPIGEEERWGIHRTAPSYEEQA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 120 ASNDILETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FR G D L+
Sbjct: 180 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRADGSDVLLF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E +++I +
Sbjct: 240 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPNLAEEMGVF------QERITSTRE 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PAI+ S SR
Sbjct: 287 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAIDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y++ + + G L +Y+EL + I+ +L +K+S+ +K
Sbjct: 347 VIGEEHYQVARDVQG----TLQRYKELRDI------IAILGMDELSEEDKLSVARARK 394
>gi|220936460|ref|YP_002515359.1| F0F1 ATP synthase subunit beta [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|254808172|sp|B8GRB8.1|ATPB_THISH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|219997770|gb|ACL74372.1| F0F1 ATP synthase subunit beta [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 459
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 287/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T+G++R V +TG PI PVG TLGR+++VLG+P+DN G+
Sbjct: 40 EVQQQLGDGVVRTIAMGSTDGMRRGVTVANTGAPISVPVGKGTLGRVMDVLGNPVDNAGD 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ ++++ IH P F Q + +LETGIKVIDLLCPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 VQTEERWSIHRPAPSFDEQAGSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVL+FIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEFFRDEGRDVLMFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELGIYPA+DPL+S
Sbjct: 280 RITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G EHY A V+ LQ+YKELKD
Sbjct: 340 SRQLDPQVIGNEHYDTARAVQNTLQRYKELKD 371
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 137/328 (41%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
+ +G T +PVG LGR+++ G +DN + R ++ + AP ++
Sbjct: 60 GMRRGVTVANTGAPISVPVGKGTLGRVMDVLGNPVDNAGDVQTEERWSIHRPAPSFDEQA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 120 GSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G+D L+
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLMF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + + KK
Sbjct: 240 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVLQERITSTKK------ 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 287 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPQ 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ L +Y+EL+
Sbjct: 347 VIGNEHYDTARA----VQNTLQRYKELK 370
>gi|421264245|ref|ZP_15715247.1| F0F1 ATP synthase subunit beta [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|401688522|gb|EJS84096.1| F0F1 ATP synthase subunit beta [Pasteurella multocida subsp.
multocida str. P52VAC]
Length = 457
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 248/356 (69%), Positives = 297/356 (83%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + +N++ + + +VQQQ+G +VR IA G+++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALNVETCLVL-EVQQQLGGGVVRCIAMGSSDGLKRGLSVTNTNNPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +GEI +++ IH PP + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEQGEIGAEENWSIHRAPPSYEEQSNSTELLETGIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPLES S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLESTSRQLDPLVVGEEHYNVARGVQTTLQRYKELKD 370
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 141/327 (43%), Gaps = 23/327 (7%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G T +PVG + LGRI+N GE ID + + + ++ + P ++ +
Sbjct: 60 LKRGLSVTNTNNPISVPVGTKTLGRIMNVLGEPIDEQGEIGAEENWSIHRAPPSYEEQSN 119
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK ID + P KG + + G GKT ++ I N + ++ +G+
Sbjct: 120 STELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGE 179
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 180 RTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFV 239
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + L E + +++I + G
Sbjct: 240 DNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTG 286
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L + + PA++ S SR V
Sbjct: 287 SITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLESTSRQLDPLV 346
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y + + ++ L +Y+EL+
Sbjct: 347 VGEEHYNVAR----GVQTTLQRYKELK 369
>gi|417851548|ref|ZP_12497275.1| F0F1 ATP synthase subunit beta [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|338219266|gb|EGP04951.1| F0F1 ATP synthase subunit beta [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
Length = 457
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 248/356 (69%), Positives = 297/356 (83%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + +N++ + + +VQQQ+G +VR IA G+++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALNVETGLVL-EVQQQLGGGVVRCIAMGSSDGLKRCLSVTNTNNPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +GEI +++ IH PP + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEQGEIGAEENWSIHRAPPSYEEQSNSTELLETGIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPLES S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLESTSRQLDPLVVGEEHYNVARGVQTTLQRYKELKD 370
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 141/326 (43%), Gaps = 26/326 (7%)
Query: 181 QKCFC---TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESV 237
++C T +PVG + LGRI+N GE ID + + + ++ + P ++ +
Sbjct: 61 KRCLSVTNTNNPISVPVGTKTLGRIMNVLGEPIDEQGEIGAEENWSIHRAPPSYEEQSNS 120
Query: 238 NEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQK 296
E L TGIK ID + P KG + + G GKT ++ I N + ++ +G++
Sbjct: 121 TELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGER 180
Query: 297 ISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYD 356
+ +++K N +D +V + + TG T+ E FRD G+D L D
Sbjct: 181 TREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVD 240
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P + L E + +++I + G+
Sbjct: 241 NIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGS 287
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VG 471
+T+ + D+T P + D + L + + PA++ S SR V
Sbjct: 288 ITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLESTSRQLDPLVV 347
Query: 472 GAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y + + ++ L +Y+EL+
Sbjct: 348 GEEHYNVAR----GVQTTLQRYKELK 369
>gi|429333979|ref|ZP_19214660.1| F0F1 ATP synthase subunit beta [Pseudomonas putida CSV86]
gi|428761372|gb|EKX83605.1| F0F1 ATP synthase subunit beta [Pseudomonas putida CSV86]
Length = 458
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 241/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR VVDT PI PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVVDTKAPISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P F++Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWGIHRAAPSFADQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G EHY+ A V++ LQ+YKELKD
Sbjct: 340 SRQLDPLVIGTEHYETARGVQYVLQRYKELKD 371
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 142/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T+ +PVG LGRI++ G ID + R + + AP D+
Sbjct: 59 EGLKRGLDVVDTKAPISVPVGKATLGRIMDVLGNPIDEAGPIGEEERWGIHRAAPSFADQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 EGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 346 LVIGTEHYETARG----VQYVLQRYKELK 370
>gi|332289264|ref|YP_004420116.1| F0F1 ATP synthase subunit beta [Gallibacterium anatis UMN179]
gi|330432160|gb|AEC17219.1| F0F1 ATP synthase subunit beta [Gallibacterium anatis UMN179]
Length = 457
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 246/356 (69%), Positives = 295/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + +N++ + + +VQQQ+G +VR IA G+++G+KR V +TG PI
Sbjct: 16 VEFPQDAVPKVYEALNVETGLVL-EVQQQLGGGVVRCIAMGSSDGLKRGLSVTNTGSPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I K + IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTETLGRIMNVLGEPIDERGPIGEKARWSIHRAAPSYEEQANSTELLETGIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM+ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMQES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKD 370
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG E LGRI+N GE ID + K R ++ + AP ++
Sbjct: 59 GLKRGLSVTNTGSPISVPVGTETLGRIMNVLGEPIDERGPIGEKARWSIHRAAPSYEEQA 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMQESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPQ 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|237747183|ref|ZP_04577663.1| F0F1-type ATP synthase [Oxalobacter formigenes HOxBLS]
gi|229378534|gb|EEO28625.1| F0F1-type ATP synthase [Oxalobacter formigenes HOxBLS]
Length = 458
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 238/356 (66%), Positives = 298/356 (83%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E N+ K + + ++ + +VQQQ+G+ +VRTIA G+++G++R ++ +TG PI+
Sbjct: 16 VEFPRENMPKVYDALKMEGSELTLEVQQQLGDGVVRTIALGSSDGLRRGMVIQNTGNPIM 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
P+G+ TLGRI+NVLG+PID +G I +++++ IH P +S + ILETGIKVIDL+
Sbjct: 76 VPIGEATLGRIMNVLGEPIDEQGPIQTEERASIHRKAPAYSELSPSQEILETGIKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA +H G SVF GVGER+REGNDFYHEM+ES
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVGERTREGNDFYHEMQES 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+++YGQMNEP GNRLRVALTGL+IAE FR+ G+DVL F+DNIYRFTLAGTEVSA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDQGRDVLFFVDNIYRFTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMGKLQERI+ST G+ITS+QA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGKLQERITSTNTGSITSIQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP++VGEEHY A +V+ LQ+YKEL+D
Sbjct: 316 STVVLSRDIASLGIYPAVDPLDSTSRQLDPHVVGEEHYNTARQVQGILQRYKELRD 371
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 140/311 (45%), Gaps = 23/311 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+P+G LGRI+N GE ID + + R ++ + AP + E L TGIK ID +
Sbjct: 76 VPIGEATLGRIMNVLGEPIDEQGPIQTEERASIHRKAPAYSELSPSQEILETGIKVIDLV 135
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K + + ++ +G++ + ++++
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVGERTREGNDFYHEMQES 195
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
N +D +V + + TG TI E FRD G+D L D++ + A ++S
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDQGRDVLFFVDNIYRFTLAGTEVSA 255
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P V Y L E K+ +++I + N G++T+ + D+
Sbjct: 256 LLGR------MPSAVGY-QPTLAEEMGKL------QERITSTNTGSITSIQAVYVPADDL 302
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P + D + L ++ + PA++ S SR V G Y +++ G
Sbjct: 303 TDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPHVVGEEHYNTARQVQG- 361
Query: 486 IRIMLAQYREL 496
+L +Y+EL
Sbjct: 362 ---ILQRYKEL 369
>gi|34499996|gb|AAQ73580.1| ATP synthase beta subunit [Volucribacter psittacicida]
Length = 444
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 247/356 (69%), Positives = 296/356 (83%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + +N++ + + +VQQQ+G +VR IA G+++G+KR V DT KPI
Sbjct: 16 VEFPQDAVPKVYDALNVETGLVL-EVQQQLGGGVVRCIAMGSSDGLKRGLSVTDTKKPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID KGEI +++ IH PP + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEKGEIGAEESWSIHRAPPSYVEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVP DDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPDDDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKD 370
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 145/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T+K +PVG + LGRI+N GE ID K + + ++ + P +++
Sbjct: 59 GLKRGLSVTDTKKPISVPVGTKTLGRIMNVLGEPIDEKGEIGAEESWSIHRAPPSYVEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPDDDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPQ 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|387896505|ref|YP_006326802.1| ATP synthase F1 subunit beta [Pseudomonas fluorescens A506]
gi|388467512|ref|ZP_10141722.1| ATP synthase F1, beta subunit [Pseudomonas synxantha BG33R]
gi|423694445|ref|ZP_17668965.1| ATP synthase F1, beta subunit [Pseudomonas fluorescens SS101]
gi|387160929|gb|AFJ56128.1| ATP synthase F1, beta subunit [Pseudomonas fluorescens A506]
gi|387999410|gb|EIK60739.1| ATP synthase F1, beta subunit [Pseudomonas fluorescens SS101]
gi|388011092|gb|EIK72279.1| ATP synthase F1, beta subunit [Pseudomonas synxantha BG33R]
Length = 458
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 241/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR VVDTG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IATEERWGIHRAAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGQEHYDTARGVQYVLQRYKELKD 371
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 140/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGPIATEERWGIHRAAPSFAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 EGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 346 NVIGQEHYDTARG----VQYVLQRYKELK 370
>gi|256575374|gb|ACU87654.1| AtpD [Gallibacterium anatis]
gi|256575378|gb|ACU87655.1| AtpD [Gallibacterium anatis]
gi|256575380|gb|ACU87656.1| AtpD [Gallibacterium anatis]
gi|270357554|gb|ACZ81009.1| AtpB [Gallibacterium anatis]
Length = 452
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 246/356 (69%), Positives = 295/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + +N++ + + +VQQQ+G +VR IA G+++G+KR V +TG PI
Sbjct: 16 VEFPQDAVPKVYEALNVETGLVL-EVQQQLGGGVVRCIAMGSSDGLKRGLSVTNTGSPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I K + IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTETLGRIMNVLGEPIDERGPIGEKARWSIHRAAPSYEEQANSTELLETGIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM+ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMQES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKD 370
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG E LGRI+N GE ID + K R ++ + AP ++
Sbjct: 59 GLKRGLSVTNTGSPISVPVGTETLGRIMNVLGEPIDERGPIGEKARWSIHRAAPSYEEQA 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMQESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPQ 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|229593481|ref|YP_002875600.1| F0F1 ATP synthase subunit beta [Pseudomonas fluorescens SBW25]
gi|259585448|sp|C3K1E6.1|ATPB_PSEFS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|229365347|emb|CAY53725.1| ATP synthase beta chain [Pseudomonas fluorescens SBW25]
Length = 458
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 241/332 (72%), Positives = 287/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR VVDTG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IDTEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGQEHYDTARGVQYVLQRYKELKD 371
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 140/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGPIDTEERWGIHRPAPSFAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 EGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 346 NVIGQEHYDTARG----VQYVLQRYKELK 370
>gi|393763489|ref|ZP_10352109.1| F0F1 ATP synthase subunit beta [Alishewanella agri BL06]
gi|392605557|gb|EIW88448.1| F0F1 ATP synthase subunit beta [Alishewanella agri BL06]
Length = 461
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 242/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G VR IA G T+G++R T VV+TGK I PVG TLGRI+NVLG+PID G
Sbjct: 43 EVQQQLGGGTVRAIALGTTDGLRRGTAVVNTGKAIQVPVGKATLGRIMNVLGEPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q +N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERWSIHRAAPSYEDQAASNALLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF+HLD+T+VLSR IA LGIYPAIDPL+S
Sbjct: 283 RITSTKTGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRNIASLGIYPAIDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY+VA V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGKEHYEVARGVQSVLQRYKELKD 374
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 158/367 (43%), Gaps = 25/367 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L +G T K ++PVG LGRI+N GE ID + R ++ +
Sbjct: 55 AIALGTTDGLRRGTAVVNTGKAIQVPVGKATLGRIMNVLGEPIDEAGPIGEEERWSIHRA 114
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP D+ + N L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 115 APSYEDQAASNALLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 174
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++K N +D +V + + TG T+ E FRD
Sbjct: 175 YSVFAGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRD 234
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L D++ ++ A ++S LL R P + L E + +
Sbjct: 235 EGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------Q 281
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P S D + L N+ + PAI+ S
Sbjct: 282 ERITSTKTGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRNIASLGIYPAIDPLDS 341
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEK 519
SR V G Y++ + ++ +L +Y+EL+ +L +T +Y K
Sbjct: 342 TSRQLDPLVIGKEHYEVARG----VQSVLQRYKELKDIIAILGMDELSDEDRTTVYRARK 397
Query: 520 ISLLMKQ 526
I + Q
Sbjct: 398 IQRFLSQ 404
>gi|395495763|ref|ZP_10427342.1| F0F1 ATP synthase subunit beta [Pseudomonas sp. PAMC 25886]
gi|395800050|ref|ZP_10479329.1| F0F1 ATP synthase subunit beta [Pseudomonas sp. Ag1]
gi|421140856|ref|ZP_15600852.1| F0F1 ATP synthase subunit beta [Pseudomonas fluorescens BBc6R8]
gi|395335892|gb|EJF67754.1| F0F1 ATP synthase subunit beta [Pseudomonas sp. Ag1]
gi|404508058|gb|EKA22032.1| F0F1 ATP synthase subunit beta [Pseudomonas fluorescens BBc6R8]
Length = 459
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 287/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V D+G I PVG TLGRI++VLG+PID G
Sbjct: 41 EVQQQLGDGVVRTIAMGSTEGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IDTEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 281 RITSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 341 SRQLDPNVIGQEHYDTARGVQYVLQRYKELKD 372
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 142/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 60 EGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIDTEERWGIHRPAPSFAEQ 119
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 120 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 179
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 180 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 239
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGTL------QERITSTK 286
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
NG++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 287 NGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 346
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 347 NVIGQEHYDTARG----VQYVLQRYKELK 371
>gi|410091067|ref|ZP_11287644.1| F0F1 ATP synthase subunit beta [Pseudomonas viridiflava UASWS0038]
gi|409761635|gb|EKN46694.1| F0F1 ATP synthase subunit beta [Pseudomonas viridiflava UASWS0038]
Length = 459
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 287/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V D+G I PVG TLGRI++VLG+PID G
Sbjct: 41 EVQQQLGDGVVRTIAMGSTEGLKRGLEVTDSGTAISVPVGKATLGRIMDVLGNPIDEAGP 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IDTEERWGIHRPAPTFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 281 RITSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 341 SRQLDPNVIGQEHYDTARGVQYVLQRYKELKD 372
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 159/387 (41%), Gaps = 30/387 (7%)
Query: 117 IIRFAYNIEYDYFDPRCLNQTLNIKFANNTVLSGQINGTTGYEEAAAQGFVAVLIDDLKN 176
II ++E+ + L ++ A T L Q G A G +
Sbjct: 9 IIGAVIDVEFPRDSVPSIYNALKVQSAAETTLEVQQQLGDGVVRTIAMG-------STEG 61
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G + + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 62 LKRGLEVTDSGTAISVPVGKATLGRIMDVLGNPIDEAGPIDTEERWGIHRPAPTFAEQAG 121
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +G+
Sbjct: 122 GNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGE 181
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 182 RTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFV 241
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + L E + +++I + NG
Sbjct: 242 DNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGTL------QERITSTKNG 288
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L ++ + PA++ S SR V
Sbjct: 289 SITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNV 348
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y + ++ +L +Y+EL+
Sbjct: 349 IGQEHYDTARG----VQYVLQRYKELK 371
>gi|260913589|ref|ZP_05920066.1| ATP synthase F1 sector subunit beta [Pasteurella dagmatis ATCC
43325]
gi|260632365|gb|EEX50539.1| ATP synthase F1 sector subunit beta [Pasteurella dagmatis ATCC
43325]
Length = 457
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 247/356 (69%), Positives = 295/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + +N+ + + +VQQQ+G +VR IA G+++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALNVDTGLVL-EVQQQLGGGVVRCIAMGSSDGLKRGLSVTNTNNPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I +++ IH PP + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEQGPIGAEENWSIHRAPPSYEEQSNSTELLETGIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPLES S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLESTSRQLDPLVVGEEHYNVARGVQTTLQRYKELKD 370
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 141/327 (43%), Gaps = 23/327 (7%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G T +PVG + LGRI+N GE ID + + ++ + P ++ +
Sbjct: 60 LKRGLSVTNTNNPISVPVGTKTLGRIMNVLGEPIDEQGPIGAEENWSIHRAPPSYEEQSN 119
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK ID + P KG + + G GKT ++ I N + ++ +G+
Sbjct: 120 STELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGE 179
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 180 RTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFV 239
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P V Y L E + +++I + G
Sbjct: 240 DNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKTG 286
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L + + PA++ S SR V
Sbjct: 287 SITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLESTSRQLDPLV 346
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y + + ++ L +Y+EL+
Sbjct: 347 VGEEHYNVARG----VQTTLQRYKELK 369
>gi|289628231|ref|ZP_06461185.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aesculi
str. NCPPB 3681]
gi|422579865|ref|ZP_16655382.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330870058|gb|EGH04767.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 459
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V D+G I PVG TLGRI++VLG+PID G
Sbjct: 41 EVQQQLGDGVVRTIAMGSTEGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 281 RITSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 341 SRQLDPNVIGQEHYDTARGVQYVLQRYKELKD 372
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 159/387 (41%), Gaps = 30/387 (7%)
Query: 117 IIRFAYNIEYDYFDPRCLNQTLNIKFANNTVLSGQINGTTGYEEAAAQGFVAVLIDDLKN 176
II ++E+ + L ++ A T L Q G A G +
Sbjct: 9 IIGAVIDVEFPRASVPSIYNALEVQSAAGTTLEVQQQLGDGVVRTIAMG-------STEG 61
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G + + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 62 LKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIATEERWGIHRPAPSFAEQAG 121
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +G+
Sbjct: 122 GNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGE 181
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 182 RTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFV 241
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + L E + +++I + NG
Sbjct: 242 DNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGTL------QERITSTKNG 288
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L ++ + PA++ S SR V
Sbjct: 289 SITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNV 348
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y + ++ +L +Y+EL+
Sbjct: 349 IGQEHYDTARG----VQYVLQRYKELK 371
>gi|378953789|ref|YP_005211277.1| protein AtpD [Pseudomonas fluorescens F113]
gi|359763803|gb|AEV65882.1| AtpD [Pseudomonas fluorescens F113]
Length = 458
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 241/332 (72%), Positives = 287/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G+T G+KR VVD+G I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGIVRTIAMGSTEGLKRGLDVVDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IDTEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGQEHYDTARGVQYVLQRYKELKD 371
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 140/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLDVVDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIDTEERWGIHRPAPSFAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 EGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 346 NVIGQEHYDTARG----VQYVLQRYKELK 370
>gi|422606618|ref|ZP_16678626.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. mori str.
301020]
gi|330890268|gb|EGH22929.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. mori str.
301020]
Length = 459
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V D+G I PVG TLGRI++VLG+PID G
Sbjct: 41 EVQQQLGDGVVRTIAMGSTEGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IATQERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 281 RITSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 341 SRQLDPNVIGQEHYDTARGVQYVLQRYKELKD 372
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 159/387 (41%), Gaps = 30/387 (7%)
Query: 117 IIRFAYNIEYDYFDPRCLNQTLNIKFANNTVLSGQINGTTGYEEAAAQGFVAVLIDDLKN 176
II ++E+ + L ++ A T L Q G A G +
Sbjct: 9 IIGAVIDVEFPRDSVPSIYNALEVQSAAGTTLEVQQQLGDGVVRTIAMG-------STEG 61
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G + + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 62 LKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIATQERWGIHRPAPSFAEQAG 121
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +G+
Sbjct: 122 GNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGE 181
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 182 RTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFV 241
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + L E + +++I + NG
Sbjct: 242 DNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGTL------QERITSTKNG 288
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L ++ + PA++ S SR V
Sbjct: 289 SITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNV 348
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y + ++ +L +Y+EL+
Sbjct: 349 IGQEHYDTARG----VQYVLQRYKELK 371
>gi|28872698|ref|NP_795317.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213968459|ref|ZP_03396602.1| ATP synthase F1, beta subunit [Pseudomonas syringae pv. tomato T1]
gi|301384254|ref|ZP_07232672.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tomato
Max13]
gi|302063895|ref|ZP_07255436.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tomato
K40]
gi|302131979|ref|ZP_07257969.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|422296230|ref|ZP_16383904.1| ATP synthase F1 subunit beta [Pseudomonas avellanae BPIC 631]
gi|422589527|ref|ZP_16664188.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|422651117|ref|ZP_16713915.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|422659122|ref|ZP_16721551.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. lachrymans
str. M302278]
gi|81728859|sp|Q87TT4.1|ATPB_PSESM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|28855954|gb|AAO59012.1| ATP synthase F1, beta subunit [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213926747|gb|EEB60299.1| ATP synthase F1, beta subunit [Pseudomonas syringae pv. tomato T1]
gi|330876336|gb|EGH10485.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330964198|gb|EGH64458.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|331017744|gb|EGH97800.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. lachrymans
str. M302278]
gi|407992674|gb|EKG34251.1| ATP synthase F1 subunit beta [Pseudomonas avellanae BPIC 631]
Length = 459
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V D+G I PVG TLGRI++VLG+PID G
Sbjct: 41 EVQQQLGDGVVRTIAMGSTEGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 281 RITSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 341 SRQLDPNVIGQEHYDTARGVQYVLQRYKELKD 372
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 159/387 (41%), Gaps = 30/387 (7%)
Query: 117 IIRFAYNIEYDYFDPRCLNQTLNIKFANNTVLSGQINGTTGYEEAAAQGFVAVLIDDLKN 176
II ++E+ + L +K A T L Q G A G +
Sbjct: 9 IIGAVIDVEFPRDSVPSIYNALEVKSAAGTTLEVQQQLGDGVVRTIAMG-------STEG 61
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G + + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 62 LKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIATEERWGIHRPAPSFAEQAG 121
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +G+
Sbjct: 122 GNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGE 181
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 182 RTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFV 241
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + L E + +++I + NG
Sbjct: 242 DNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGTL------QERITSTKNG 288
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L ++ + PA++ S SR V
Sbjct: 289 SITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNV 348
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y + ++ +L +Y+EL+
Sbjct: 349 IGQEHYDTARG----VQYVLQRYKELK 371
>gi|422628662|ref|ZP_16693870.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. pisi str.
1704B]
gi|330937325|gb|EGH41327.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. pisi str.
1704B]
Length = 430
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V D+G I PVG TLGRI++VLG+PID G
Sbjct: 12 EVQQQLGDGVVRTIAMGSTEGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 71
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 72 IATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 131
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 132 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 191
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 192 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQE 251
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 252 RITSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 311
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 312 SRQLDPNVIGQEHYDTARGVQYVLQRYKELKD 343
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 142/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 31 EGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIATEERWGIHRPAPSFAEQ 90
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 91 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 150
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 151 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 210
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 211 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGTL------QERITSTK 257
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
NG++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 258 NGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 317
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 318 NVIGQEHYDTARG----VQYVLQRYKELK 342
>gi|422672571|ref|ZP_16731934.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aceris
str. M302273]
gi|330970308|gb|EGH70374.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aceris
str. M302273]
Length = 443
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V D+G I PVG TLGRI++VLG+PID G
Sbjct: 41 EVQQQLGDGVVRTIAMGSTEGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 281 RITSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 341 SRQLDPNVIGQEHYDTARGVQYVLQRYKELKD 372
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 159/387 (41%), Gaps = 30/387 (7%)
Query: 117 IIRFAYNIEYDYFDPRCLNQTLNIKFANNTVLSGQINGTTGYEEAAAQGFVAVLIDDLKN 176
II ++E+ + L ++ A T L Q G A G +
Sbjct: 9 IIGAVIDVEFPRDSVPSIYNALEVQSAAGTTLEVQQQLGDGVVRTIAMG-------STEG 61
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G + + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 62 LKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIATEERWGIHRPAPSFAEQAG 121
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +G+
Sbjct: 122 GNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGE 181
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 182 RTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFV 241
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + L E + +++I + NG
Sbjct: 242 DNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGTL------QERITSTKNG 288
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L ++ + PA++ S SR V
Sbjct: 289 SITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNV 348
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y + ++ +L +Y+EL+
Sbjct: 349 IGQEHYDTARG----VQYVLQRYKELK 371
>gi|397665601|ref|YP_006507139.1| F1 sector of membrane-bound ATP synthase, beta subunit [Legionella
pneumophila subsp. pneumophila]
gi|395129012|emb|CCD07235.1| F1 sector of membrane-bound ATP synthase, beta subunit [Legionella
pneumophila subsp. pneumophila]
Length = 458
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 245/356 (68%), Positives = 294/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + L ++ + +VQQQ+G+ +VRTIA G T+G+KR +TG PI
Sbjct: 16 VEFPRDSVPKVNDALKLVDSDLVFEVQQQLGDGVVRTIAMGTTDGLKRGLKAQNTGHPIQ 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG P+D+ G I++++ IH P + Q + +LETGIKVIDLL
Sbjct: 76 VPVGKKTLGRIMDVLGRPVDDAGPIDAEETWAIHRKAPSYEEQAGSQELLETGIKVIDLL 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAG EVSA
Sbjct: 196 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGVEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGMLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSRQIAELGIYPA+DPL+S S+QLDP IVG+EHY A V+ LQ+YKELKD
Sbjct: 316 ATVVLSRQIAELGIYPAVDPLDSTSRQLDPLIVGQEHYDTARRVQQTLQRYKELKD 371
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI++ G +D+ + + + AP ++
Sbjct: 60 GLKRGLKAQNTGHPIQVPVGKKTLGRIMDVLGRPVDDAGPIDAEETWAIHRKAPSYEEQA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 120 GSQELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 240 IDNIYRYTLAGVEVSALLGRMPSAVGY-------------QPTLAEEMGMLQERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 287 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y ++ ++ L +Y+EL+
Sbjct: 347 IVGQEHYDTARR----VQQTLQRYKELK 370
>gi|344941843|ref|ZP_08781131.1| ATP synthase subunit beta [Methylobacter tundripaludum SV96]
gi|344263035|gb|EGW23306.1| ATP synthase subunit beta [Methylobacter tundripaludum SV96]
Length = 459
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 244/359 (67%), Positives = 294/359 (81%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E ++ K + +N++ + +VQQQ+G+ +VRTIA G T+G+ R V +T
Sbjct: 13 VVDVEFSRSDLPKVYDALNVQGKGLVLEVQQQLGDGVVRTIAMGTTDGLSRGLEVSNTNA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI+NVLG+PID KG I K K IH P ++ Q +LETGIKVI
Sbjct: 73 PIAVPVGQETLGRIMNVLGEPIDEKGPIGEKVKWGIHREAPSYAEQAAATELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLVCPFTKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTE 793
+SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+TLAGTE
Sbjct: 193 TDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLFFVDNIYRYTLAGTE 252
Query: 794 VSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFT 853
VSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF
Sbjct: 253 VSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFA 312
Query: 854 HLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSRQIAELGIYPAIDPL+S S+QLDP ++G+EHY VA +V+ LQ+YKEL+D
Sbjct: 313 HLDATVVLSRQIAELGIYPAIDPLDSTSRQLDPLVIGQEHYDVARKVQGILQRYKELRD 371
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 143/327 (43%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G + T +PVG E LGRI+N GE ID K K + + + AP ++
Sbjct: 60 GLSRGLEVSNTNAPIAVPVGQETLGRIMNVLGEPIDEKGPIGEKVKWGIHREAPSYAEQA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 120 AATELLETGIKVIDLVCPFTKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ EYFRD G+D L
Sbjct: 180 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLFF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PAI+ S SR
Sbjct: 287 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAIDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + +K+ G +L +Y+EL
Sbjct: 347 VIGQEHYDVARKVQG----ILQRYKEL 369
>gi|26992088|ref|NP_747513.1| ATP synthase F0F1 subunit beta [Pseudomonas putida KT2440]
gi|148550495|ref|YP_001270597.1| F0F1 ATP synthase subunit beta [Pseudomonas putida F1]
gi|386009697|ref|YP_005927974.1| AtpB [Pseudomonas putida BIRD-1]
gi|395446347|ref|YP_006386600.1| F0F1 ATP synthase subunit beta [Pseudomonas putida ND6]
gi|397696669|ref|YP_006534552.1| ATP synthase subunit beta [Pseudomonas putida DOT-T1E]
gi|421523155|ref|ZP_15969786.1| F0F1 ATP synthase subunit beta [Pseudomonas putida LS46]
gi|81439305|sp|Q88BX4.1|ATPB_PSEPK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|166990374|sp|A5WBA3.1|ATPB_PSEP1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|24987230|gb|AAN70977.1|AE016742_6 ATP synthase F1, beta subunit [Pseudomonas putida KT2440]
gi|148514553|gb|ABQ81413.1| ATP synthase F1, beta subunit [Pseudomonas putida F1]
gi|313496403|gb|ADR57769.1| AtpB [Pseudomonas putida BIRD-1]
gi|388560344|gb|AFK69485.1| F0F1 ATP synthase subunit beta [Pseudomonas putida ND6]
gi|397333399|gb|AFO49758.1| ATP synthase subunit beta [Pseudomonas putida DOT-T1E]
gi|402752976|gb|EJX13479.1| F0F1 ATP synthase subunit beta [Pseudomonas putida LS46]
Length = 458
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 241/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR VVDTG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P F++Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERRGIHQPAPSFADQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA+EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKEGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G EHY+ A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGNEHYETARGVQYVLQRYKELKD 371
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 141/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G ID + R + + AP D+
Sbjct: 59 EGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERRGIHQPAPSFADQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 EGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 346 NVIGNEHYETARG----VQYVLQRYKELK 370
>gi|66048345|ref|YP_238186.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. syringae
B728a]
gi|237801681|ref|ZP_04590142.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|257485616|ref|ZP_05639657.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|289649121|ref|ZP_06480464.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aesculi
str. 2250]
gi|289677529|ref|ZP_06498419.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. syringae
FF5]
gi|302185823|ref|ZP_07262496.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. syringae
642]
gi|416019745|ref|ZP_11566504.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. glycinea
str. B076]
gi|416023725|ref|ZP_11567973.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. glycinea
str. race 4]
gi|422406690|ref|ZP_16483713.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. glycinea
str. race 4]
gi|422596705|ref|ZP_16670985.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|422639960|ref|ZP_16703388.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae Cit 7]
gi|422647946|ref|ZP_16711072.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. maculicola
str. ES4326]
gi|422665961|ref|ZP_16725831.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|422682566|ref|ZP_16740831.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|424065226|ref|ZP_17802706.1| ATP synthase F1 subunit beta [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
gi|424069892|ref|ZP_17807334.1| ATP synthase F1 subunit beta [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
gi|440719838|ref|ZP_20900261.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae BRIP34876]
gi|440728157|ref|ZP_20908376.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae BRIP34881]
gi|440743540|ref|ZP_20922849.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae BRIP39023]
gi|443645593|ref|ZP_21129443.1| F0F1 ATP synthase, F1 beta subunit [Pseudomonas syringae pv.
syringae B64]
gi|75499956|sp|Q4ZL24.1|ATPB_PSEU2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|63259052|gb|AAY40148.1| ATP synthase F1, beta subunit [Pseudomonas syringae pv. syringae
B728a]
gi|298155948|gb|EFH97059.1| ATP synthase beta chain [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|320321670|gb|EFW77769.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. glycinea
str. B076]
gi|320331127|gb|EFW87098.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330881925|gb|EGH16074.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330952352|gb|EGH52612.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae Cit 7]
gi|330961486|gb|EGH61746.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. maculicola
str. ES4326]
gi|330976386|gb|EGH76443.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|330987002|gb|EGH85105.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|331011905|gb|EGH91961.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|331024540|gb|EGI04596.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|408001616|gb|EKG41911.1| ATP synthase F1 subunit beta [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
gi|408003571|gb|EKG43741.1| ATP synthase F1 subunit beta [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
gi|440362264|gb|ELP99464.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae BRIP34881]
gi|440367078|gb|ELQ04147.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae BRIP34876]
gi|440375305|gb|ELQ12015.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae BRIP39023]
gi|443285610|gb|ELS44615.1| F0F1 ATP synthase, F1 beta subunit [Pseudomonas syringae pv.
syringae B64]
Length = 459
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V D+G I PVG TLGRI++VLG+PID G
Sbjct: 41 EVQQQLGDGVVRTIAMGSTEGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 281 RITSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 341 SRQLDPNVIGQEHYDTARGVQYVLQRYKELKD 372
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 159/387 (41%), Gaps = 30/387 (7%)
Query: 117 IIRFAYNIEYDYFDPRCLNQTLNIKFANNTVLSGQINGTTGYEEAAAQGFVAVLIDDLKN 176
II ++E+ + L ++ A T L Q G A G +
Sbjct: 9 IIGAVIDVEFPRDSVPSIYNALEVQSAAGTTLEVQQQLGDGVVRTIAMG-------STEG 61
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G + + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 62 LKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIATEERWGIHRPAPSFAEQAG 121
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +G+
Sbjct: 122 GNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGE 181
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 182 RTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFV 241
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + L E + +++I + NG
Sbjct: 242 DNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGTL------QERITSTKNG 288
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L ++ + PA++ S SR V
Sbjct: 289 SITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNV 348
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y + ++ +L +Y+EL+
Sbjct: 349 IGQEHYDTARG----VQYVLQRYKELK 371
>gi|406916145|gb|EKD55178.1| hypothetical protein ACD_60C00025G0075 [uncultured bacterium]
Length = 458
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 250/347 (72%), Positives = 292/347 (84%)
Query: 566 KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLG 625
K + + +++ + +VQQQ+G+ IVRTIA G T+G++R V +TG PI PVG TLG
Sbjct: 25 KIYDALKIEDKNVMLEVQQQLGDGIVRTIAMGITDGLRRGLAVKNTGGPISVPVGKKTLG 84
Query: 626 RILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKI 685
RI++VLG+PID G I+++ PIH P FS Q + +LETGIKVIDL+CPF KGGK+
Sbjct: 85 RIMDVLGNPIDEAGPIDTEDYLPIHREAPSFSEQAASEELLETGIKVIDLICPFAKGGKV 144
Query: 686 GLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLI 745
GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFY EMKES VLDKVSL+
Sbjct: 145 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYLEMKESKVLDKVSLV 204
Query: 746 YGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAV 805
YGQMNEP GNRLRVALTGL+IAE FR+ G+DVLLFIDNIYR+TLAG EVSA+LGR PSAV
Sbjct: 205 YGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLLFIDNIYRYTLAGVEVSALLGRIPSAV 264
Query: 806 GYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQI 865
GYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQI
Sbjct: 265 GYQPTLAEEMGALQERITSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 324
Query: 866 AELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
AELGIYPAIDPL+S S+QLDP IVG+EHY VA +V+ LQ+YKELKD
Sbjct: 325 AELGIYPAIDPLDSTSRQLDPLIVGQEHYDVALQVQKTLQRYKELKD 371
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 138/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG + LGRI++ G ID ++ + + AP ++
Sbjct: 60 GLRRGLAVKNTGGPISVPVGKKTLGRIMDVLGNPIDEAGPIDTEDYLPIHREAPSFSEQA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 120 ASEELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + TG TI E FRD G+D L+
Sbjct: 180 ERTREGNDFYLEMKESKVLDKVSLVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLLF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 240 IDNIYRYTLAGVEVSALLGR------IPSAVGY-QPTLAEEMGAL------QERITSTKK 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PAI+ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAIDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + ++ L +Y+EL+
Sbjct: 347 IVGQEHYDVALQ----VQKTLQRYKELK 370
>gi|226941914|ref|YP_002796988.1| AtpB [Laribacter hongkongensis HLHK9]
gi|254808155|sp|C1D5G2.1|ATPB_LARHH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226716841|gb|ACO75979.1| AtpB [Laribacter hongkongensis HLHK9]
Length = 458
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 241/356 (67%), Positives = 295/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E +I + + + +++ +VQQQ+G+ +VR IA G+++G+KR V +TG I
Sbjct: 16 VEFPRDSIPRVYDALKVESTGLTLEVQQQLGDGVVRCIAMGSSDGLKRGLPVTNTGAAIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G + ++++ PIH PKF ++ +LETGIKVIDLL
Sbjct: 76 VPVGTATLGRIMDVLGTPIDELGPVATEERMPIHRAAPKFDELSASSELLETGIKVIDLL 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMKES
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFTGVGERTREGNDFYHEMKES 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMGK QER++STK G+ITS+QA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGKFQERVASTKTGSITSIQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQKYKEL+D
Sbjct: 316 ATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGDEHYSVARGVQMTLQKYKELRD 371
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 141/327 (43%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID + R + + AP +
Sbjct: 60 GLKRGLPVTNTGAAISVPVGTATLGRIMDVLGTPIDELGPVATEERMPIHRAAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ +E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 120 ASSELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFTGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 180 ERTREGNDFYHEMKESNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K ++++ +
Sbjct: 240 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKF------QERVASTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 287 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + + +++ L +Y+EL
Sbjct: 347 VVGDEHYSVARG----VQMTLQKYKEL 369
>gi|121999208|ref|YP_001003995.1| F0F1 ATP synthase subunit beta [Halorhodospira halophila SL1]
gi|166201711|sp|A1WZT1.1|ATPB_HALHL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|121590613|gb|ABM63193.1| ATP synthase F1 subcomplex beta subunit [Halorhodospira halophila
SL1]
Length = 458
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G+ R+ V +TG PI PVG TLGRI++VLG+P+D GE
Sbjct: 40 EVQQQLGDGVVRTIAMGSSDGLTRSEKVSNTGNPISVPVGQGTLGRIMDVLGEPVDEAGE 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ + ++ IH P + Q +LETGIKVIDLLCPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 VKTDERWSIHRNAPSYEEQSGGQELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA+EH G SVF GVGER+REGNDFYHEMK+SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAVEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVL+FIDNIYR+TLAG EVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 220 LTGLTMAEYFRDEGRDVLMFIDNIYRYTLAGQEVSALLGRMPSAVGYQPTLAEEMGKLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDP+P+TTF HLD+TIVLSRQIAELGIYPA+DPL+S
Sbjct: 280 RITSTKTGSITSVQAVYVPADDLTDPAPATTFAHLDATIVLSRQIAELGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY VA V+ LQ+YKELKD
Sbjct: 340 SRQLDPLVIGQEHYDVARGVQGVLQRYKELKD 371
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 145/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
LT+ +K T +PVG LGRI++ GE +D + R ++ + AP ++
Sbjct: 60 GLTRSEKVSNTGNPISVPVGQGTLGRIMDVLGEPVDEAGEVKTDERWSIHRNAPSYEEQS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 120 GGQELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ EYFRD G+D L+
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLMF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A +++S LL R P + L E K+ +++I +
Sbjct: 240 IDNIYRYTLAGQEVSALLGRMPSAVGY-------QPTLAEEMGKL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D I L + PA++ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPAPATTFAHLDATIVLSRQIAELGIYPAVDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 347 VIGQEHYDVARGVQG----VLQRYKELK 370
>gi|52843175|ref|YP_096974.1| ATP synthase F0F1 subunit beta [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54295820|ref|YP_128235.1| ATP synthase F0F1 subunit beta [Legionella pneumophila str. Lens]
gi|54298986|ref|YP_125355.1| F0F1 ATP synthase subunit beta [Legionella pneumophila str. Paris]
gi|148361322|ref|YP_001252529.1| ATP synthase F1 subunit beta [Legionella pneumophila str. Corby]
gi|296108663|ref|YP_003620364.1| F-type H -transporting ATPase beta chain [Legionella pneumophila
2300/99 Alcoy]
gi|378778864|ref|YP_005187306.1| H+-transporting two-sector ATPase, ATP synthase F1 subunit beta
[Legionella pneumophila subsp. pneumophila ATCC 43290]
gi|397668665|ref|YP_006510202.1| F1 sector of membrane-bound ATP synthase, beta subunit [Legionella
pneumophila subsp. pneumophila]
gi|81822284|sp|Q5WSG8.1|ATPB_LEGPL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|81822477|sp|Q5X0P3.1|ATPB_LEGPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|81823315|sp|Q5ZRA1.1|ATPB_LEGPH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|166201715|sp|A5III3.1|ATPB_LEGPC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|52630286|gb|AAU29027.1| H+-transporting two-sector ATPase, ATP synthase F1 subunit beta
[Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|53752771|emb|CAH14206.1| hypothetical protein lpp3053 [Legionella pneumophila str. Paris]
gi|53755652|emb|CAH17154.1| hypothetical protein lpl2910 [Legionella pneumophila str. Lens]
gi|148283095|gb|ABQ57183.1| H+-transporting two-sector ATPase, ATP synthase F1 subunit beta
[Legionella pneumophila str. Corby]
gi|295650565|gb|ADG26412.1| F-type H -transporting ATPase beta chain [Legionella pneumophila
2300/99 Alcoy]
gi|307611866|emb|CBX01582.1| hypothetical protein LPW_32691 [Legionella pneumophila 130b]
gi|364509682|gb|AEW53206.1| H+-transporting two-sector ATPase, ATP synthase F1 subunit beta
[Legionella pneumophila subsp. pneumophila ATCC 43290]
gi|395132076|emb|CCD10371.1| F1 sector of membrane-bound ATP synthase, beta subunit [Legionella
pneumophila subsp. pneumophila]
Length = 458
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 245/356 (68%), Positives = 294/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + L ++ + +VQQQ+G+ +VRTIA G T+G+KR +TG PI
Sbjct: 16 VEFPRDSVPKVNDALKLVDSDLVFEVQQQLGDGVVRTIAMGTTDGLKRGLKAENTGHPIQ 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG P+D+ G I++++ IH P + Q + +LETGIKVIDLL
Sbjct: 76 VPVGKKTLGRIMDVLGRPVDDAGPIDAEETWAIHRKAPSYEEQAGSQELLETGIKVIDLL 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAG EVSA
Sbjct: 196 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGVEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGMLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSRQIAELGIYPA+DPL+S S+QLDP IVG+EHY A V+ LQ+YKELKD
Sbjct: 316 ATVVLSRQIAELGIYPAVDPLDSTSRQLDPLIVGQEHYDTARRVQQTLQRYKELKD 371
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI++ G +D+ + + + AP ++
Sbjct: 60 GLKRGLKAENTGHPIQVPVGKKTLGRIMDVLGRPVDDAGPIDAEETWAIHRKAPSYEEQA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 120 GSQELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 240 IDNIYRYTLAGVEVSALLGR------MPSAVGY-------QPTLAEEMGMLQERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 287 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y ++ ++ L +Y+EL+
Sbjct: 347 IVGQEHYDTARR----VQQTLQRYKELK 370
>gi|395650544|ref|ZP_10438394.1| F0F1 ATP synthase subunit beta [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 459
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 287/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V+DTG I PVG TLGRI++VLG+PID G
Sbjct: 41 EVQQQLGDGVVRTIAMGSTEGLKRGLGVLDTGAAISVPVGKATLGRIMDVLGNPIDEAGP 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IDTEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 281 RITSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 341 SRQLDPNVIGQEHYDTARGVQYVLQRYKELKD 372
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 140/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G ID + R + + AP ++
Sbjct: 60 EGLKRGLGVLDTGAAISVPVGKATLGRIMDVLGNPIDEAGPIDTEERWGIHRPAPSFAEQ 119
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 120 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 179
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 180 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 239
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 286
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 287 EGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 346
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 347 NVIGQEHYDTARG----VQYVLQRYKELK 371
>gi|325275312|ref|ZP_08141265.1| F0F1 ATP synthase subunit beta [Pseudomonas sp. TJI-51]
gi|324099560|gb|EGB97453.1| F0F1 ATP synthase subunit beta [Pseudomonas sp. TJI-51]
Length = 458
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 241/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR VVDTG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P F++Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERRGIHQPAPSFADQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA+EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKEGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G EHY+ A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGNEHYETARGVQYVLQRYKELKD 371
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 141/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G ID + R + + AP D+
Sbjct: 59 EGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERRGIHQPAPSFADQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 EGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 346 NVIGNEHYETARG----VQYVLQRYKELK 370
>gi|402575034|ref|YP_006607926.1| ATP synthase F1 subunit beta [Candidatus Portiera aleyrodidarum
BT-B-HRs]
gi|407453052|ref|YP_006732371.1| ATP synthase subunit beta [Candidatus Portiera aleyrodidarum
BT-QVLC]
gi|407681382|ref|YP_006796558.1| ATP synthase subunit beta [Candidatus Portiera aleyrodidarum
BT-QVLC]
gi|407681663|ref|YP_006796838.1| ATP synthase beta chain [Candidatus Portiera aleyrodidarum
BT-B-HRs]
gi|401871838|gb|AFQ24006.1| ATP synthase, F1 beta subunit [Candidatus Portiera aleyrodidarum
BT-B-HRs]
gi|405779769|gb|AFS18772.1| ATP synthase subunit beta [Candidatus Portiera aleyrodidarum
BT-QVLC]
gi|407242993|gb|AFT80394.1| ATP synthase beta chain [Candidatus Portiera aleyrodidarum BT-QVLC]
gi|407243274|gb|AFT80674.1| ATP synthase beta chain [Candidatus Portiera aleyrodidarum
BT-B-HRs]
Length = 456
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 254/345 (73%), Positives = 291/345 (84%), Gaps = 3/345 (0%)
Query: 568 FRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRI 627
+++NL + +VQQ IG+NIVRTIA G+T GIKRN V++T PI PVG TLGRI
Sbjct: 29 LKVVNLSLTL---EVQQHIGDNIVRTIAMGSTEGIKRNLKVINTKSPIKVPVGVQTLGRI 85
Query: 628 LNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGL 687
+NVLG+ ID KG IN K IH PPK+ Q NN ILETGIKVIDL+CPF+KGGKIGL
Sbjct: 86 MNVLGETIDEKGPINEKTNMSIHKKPPKYIEQSINNEILETGIKVIDLMCPFVKGGKIGL 145
Query: 688 FGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYG 747
FGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFY+EMK S VLDKV+LIYG
Sbjct: 146 FGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYNEMKVSKVLDKVALIYG 205
Query: 748 QMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY 807
QMNEPSGNR R ALTGL+IAE FR+ G+DVLLFIDNIYRFTLAGTE+SA+LGR PSAVGY
Sbjct: 206 QMNEPSGNRFRTALTGLTIAEAFRDEGRDVLLFIDNIYRFTLAGTEISALLGRMPSAVGY 265
Query: 808 QPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAE 867
QPTLAEE+G LQERI+STK G+ITS+QA+YVPADDLTDPSPS F+HLD+TIVLSR+IAE
Sbjct: 266 QPTLAEEVGMLQERITSTKKGSITSIQAVYVPADDLTDPSPSAIFSHLDATIVLSRKIAE 325
Query: 868 LGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LGIYPAIDPLES S+QLDP +V + HYKV+ +V+ LQ+YKELKD
Sbjct: 326 LGIYPAIDPLESNSRQLDPLVVSKNHYKVSLKVRKILQRYKELKD 370
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 143/322 (44%), Gaps = 23/322 (7%)
Query: 182 KCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPL 241
K T+ ++PVG + LGRI+N GE ID K K ++ K P +++ NE L
Sbjct: 65 KVINTKSPIKVPVGVQTLGRIMNVLGETIDEKGPINEKTNMSIHKKPPKYIEQSINNEIL 124
Query: 242 LTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSL 300
TGIK ID M P KG + + G GKT ++ I N + ++ +G++
Sbjct: 125 ETGIKVIDLMCPFVKGGKIGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREG 184
Query: 301 INVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTK 360
+ N++K +D ++ + + ++ + TG TI E FRD G+D L+ D++ +
Sbjct: 185 NDFYNEMKVSKVLDKVALIYGQMNEPSGNRFRTALTGLTIAEAFRDEGRDVLLFIDNIYR 244
Query: 361 HAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAF 420
A +IS LL R P + L E + + KK G++T+
Sbjct: 245 FTLAGTEISALLGRMPSAVGY-------QPTLAEEVGMLQERITSTKK------GSITSI 291
Query: 421 PIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQ 475
+ D+T P+ + S D I L + PAI+ S SR V
Sbjct: 292 QAVYVPADDLTDPSPSAIFSHLDATIVLSRKIAELGIYPAIDPLESNSRQLDPLVVSKNH 351
Query: 476 YKIVKKLSGDIRIMLAQYRELE 497
YK+ K +R +L +Y+EL+
Sbjct: 352 YKVSLK----VRKILQRYKELK 369
>gi|406939156|gb|EKD72239.1| hypothetical protein ACD_45C00732G0005 [uncultured bacterium]
Length = 458
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/347 (71%), Positives = 290/347 (83%)
Query: 566 KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLG 625
K + + + +N + +VQQQ+G+ +VRTIA G T+G++R V +TG PI PVG TLG
Sbjct: 25 KVYDALTIDDNHLVLEVQQQLGDGVVRTIAMGITDGLRRGLAVKNTGHPITVPVGRPTLG 84
Query: 626 RILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKI 685
RI++VLG+ ID G I +++ PIH P F+ Q + +LETGIKVIDL+CPF KGGK+
Sbjct: 85 RIMDVLGNAIDEAGAIKAEQHLPIHRPAPTFAEQAASEELLETGIKVIDLVCPFAKGGKV 144
Query: 686 GLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLI 745
GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFY EMKES VLDKVSL+
Sbjct: 145 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYLEMKESKVLDKVSLV 204
Query: 746 YGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAV 805
YGQMNEP GNRLRVALTGL+IAE FR+ G+DVLLFIDNIYR+TLAG EVSA+LGR PSAV
Sbjct: 205 YGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLLFIDNIYRYTLAGVEVSALLGRIPSAV 264
Query: 806 GYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQI 865
GYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQI
Sbjct: 265 GYQPTLAEEMGTLQERITSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 324
Query: 866 AELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
AELGIYPAIDPL+S S+QLDP IVG+EHY +A V+ LQ+YKELKD
Sbjct: 325 AELGIYPAIDPLDSTSRQLDPLIVGQEHYDIALSVQRTLQRYKELKD 371
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 145/358 (40%), Gaps = 29/358 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID + + + AP ++
Sbjct: 60 GLRRGLAVKNTGHPITVPVGRPTLGRIMDVLGNAIDEAGAIKAEQHLPIHRPAPTFAEQA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 120 ASEELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + TG TI E FRD G+D L+
Sbjct: 180 ERTREGNDFYLEMKESKVLDKVSLVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLLF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 240 IDNIYRYTLAGVEVSALLGR------IPSAVGY-QPTLAEEMGTL------QERITSTKK 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PAI+ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAIDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMKQK 527
+ G Y I L+ R L+ + + + I+ +L +K+++ +K
Sbjct: 347 IVGQEHYDIA----------LSVQRTLQRYKELKDIIAILGMDELSEEDKLTVTRARK 394
>gi|421615440|ref|ZP_16056464.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri KOS6]
gi|409782513|gb|EKN62068.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri KOS6]
Length = 458
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 242/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G+T G+KR VV+TG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGIVRTIAMGSTEGLKRGLDVVNTGAGISVPVGKQTLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P +S Q N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWTIHRAAPSYSEQAGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA+EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKNGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 340 SRQLDPLVIGQEHYDTARGVQYVLQRYKELKD 371
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 144/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG + LGRI++ G ID + R T+ + AP ++
Sbjct: 59 EGLKRGLDVVNTGAGISVPVGKQTLGRIMDVLGNPIDEAGPIGEEERWTIHRAAPSYSEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
NE L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
NG++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 NGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 346 LVIGQEHYDTARG----VQYVLQRYKELK 370
>gi|388458045|ref|ZP_10140340.1| F0F1 ATP synthase subunit beta [Fluoribacter dumoffii Tex-KL]
Length = 458
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 246/356 (69%), Positives = 291/356 (81%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E N+ K + L + + +VQQQ+G+ +VRTIA G T G+KR +T PI
Sbjct: 16 VEFPRENVPKINDALKLVDGDLVFEVQQQLGDGVVRTIAMGTTEGLKRGLKAENTANPIQ 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG P+D+ G I +++ IH PP + Q + +LETGIKVIDLL
Sbjct: 76 VPVGKQTLGRIMDVLGRPVDDAGPIGAEEHWSIHRKPPSYEEQAGSQELLETGIKVIDLL 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAG EVSA
Sbjct: 196 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGVEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGMLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSRQIAELGIYPA+DPL+S S+QLDP IVG+EHY A V+ LQ+YKELKD
Sbjct: 316 ATVVLSRQIAELGIYPAVDPLDSTSRQLDPLIVGQEHYDTARRVQQTLQRYKELKD 371
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 143/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G K T ++PVG + LGRI++ G +D+ + ++ + P ++
Sbjct: 59 EGLKRGLKAENTANPIQVPVGKQTLGRIMDVLGRPVDDAGPIGAEEHWSIHRKPPSYEEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
E L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGSQELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 239 FIDNIYRYTLAGVEVSALLGR------MPSAVGY-------QPTLAEEMGMLQERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 286 TGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y ++ ++ L +Y+EL+
Sbjct: 346 LIVGQEHYDTARR----VQQTLQRYKELK 370
>gi|408479877|ref|ZP_11186096.1| F0F1 ATP synthase subunit beta [Pseudomonas sp. R81]
Length = 458
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 287/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR VVD+G I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVVDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IDTEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGQEHYDTARGVQYVLQRYKELKD 371
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 140/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLDVVDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIDTEERWGIHRPAPSFAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 EGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 346 NVIGQEHYDTARG----VQYVLQRYKELK 370
>gi|71733339|ref|YP_277280.1| ATP synthase F0F1 subunit beta [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|118573721|sp|Q48BG5.1|ATPB_PSE14 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|71553892|gb|AAZ33103.1| ATP synthase F1, beta subunit [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 459
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V D+G I PVG TLGRI++VLG+PID G
Sbjct: 41 EVQQQLGDGVVRTIAMGSTEGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFTKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 281 RITSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 341 SRQLDPNVIGQEHYDTARGVQYVLQRYKELKD 372
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 159/387 (41%), Gaps = 30/387 (7%)
Query: 117 IIRFAYNIEYDYFDPRCLNQTLNIKFANNTVLSGQINGTTGYEEAAAQGFVAVLIDDLKN 176
II ++E+ + L ++ A T L Q G A G +
Sbjct: 9 IIGAVIDVEFPRDSVPSIYNALEVQSAAGTTLEVQQQLGDGVVRTIAMG-------STEG 61
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G + + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 62 LKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIATEERWGIHRPAPSFAEQAG 121
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +G+
Sbjct: 122 GNDLLETGIKVIDLVCPFTKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGE 181
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 182 RTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFV 241
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + L E + +++I + NG
Sbjct: 242 DNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGTL------QERITSTKNG 288
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L ++ + PA++ S SR V
Sbjct: 289 SITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNV 348
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y + ++ +L +Y+EL+
Sbjct: 349 IGQEHYDTARG----VQYVLQRYKELK 371
>gi|146284502|ref|YP_001174655.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri A1501]
gi|339496271|ref|YP_004716564.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
gi|386022918|ref|YP_005940943.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri DSM 4166]
gi|166201728|sp|A4VS62.1|ATPB_PSEU5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|145572707|gb|ABP81813.1| ATP synthase beta chain [Pseudomonas stutzeri A1501]
gi|327482891|gb|AEA86201.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri DSM 4166]
gi|338803643|gb|AEJ07475.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
Length = 458
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 242/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G+T G+KR VV+TG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGIVRTIAMGSTEGLKRGLDVVNTGTGISVPVGKQTLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P +S Q N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWTIHRAAPSYSEQAGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA+EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKNGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 340 SRQLDPLVIGQEHYDTARGVQYVLQRYKELKD 371
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 144/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG + LGRI++ G ID + R T+ + AP ++
Sbjct: 59 EGLKRGLDVVNTGTGISVPVGKQTLGRIMDVLGNPIDEAGPIGEEERWTIHRAAPSYSEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
NE L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
NG++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 NGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 346 LVIGQEHYDTARG----VQYVLQRYKELK 370
>gi|398845117|ref|ZP_10602162.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM84]
gi|398253889|gb|EJN39001.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM84]
Length = 458
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 241/332 (72%), Positives = 285/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR VVDTG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P F++Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERRGIHQPAPSFADQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA+EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKEGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G EHY A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGNEHYDTARGVQYVLQRYKELKD 371
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 140/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G ID + R + + AP D+
Sbjct: 59 EGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERRGIHQPAPSFADQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 EGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 346 NVIGNEHYDTARG----VQYVLQRYKELK 370
>gi|398944820|ref|ZP_10671489.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM41(2012)]
gi|407367457|ref|ZP_11113989.1| F0F1 ATP synthase subunit beta [Pseudomonas mandelii JR-1]
gi|398157803|gb|EJM46176.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM41(2012)]
Length = 459
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 287/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V D+G I PVG TLGRI++VLG+PID G
Sbjct: 41 EVQQQLGDGVVRTIAMGSTEGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IDTEERWGIHRPAPTFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 281 RITSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G++HY A V++ LQ+YKELKD
Sbjct: 341 SRQLDPNVIGQDHYDTARGVQYVLQRYKELKD 372
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 142/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 60 EGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIDTEERWGIHRPAPTFAEQ 119
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 120 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 179
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 180 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 239
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGTL------QERITSTK 286
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
NG++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 287 NGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 346
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 347 NVIGQDHYDTARG----VQYVLQRYKELK 371
>gi|418295043|ref|ZP_12906917.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
gi|379066400|gb|EHY79143.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
Length = 458
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 242/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G+T G+KR VV+TG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGIVRTIAMGSTEGLKRGLDVVNTGTGISVPVGKQTLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P +S Q N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWTIHRAAPSYSEQAGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA+EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKNGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 340 SRQLDPLVIGQEHYDTARGVQYVLQRYKELKD 371
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 144/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG + LGRI++ G ID + R T+ + AP ++
Sbjct: 59 EGLKRGLDVVNTGTGISVPVGKQTLGRIMDVLGNPIDEAGPIGEEERWTIHRAAPSYSEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
NE L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
NG++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 NGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 346 LVIGQEHYDTARG----VQYVLQRYKELK 370
>gi|34500018|gb|AAQ73591.1| ATP synthase beta subunit [Bisgaard Taxon 7]
Length = 444
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/356 (69%), Positives = 295/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + +N++ + + +VQQQ+G +VR IA G ++G+KR V +T KPI
Sbjct: 16 VEFPQDAVPKVYDALNVETGLVL-EVQQQLGGGVVRCIAMGTSDGLKRGLSVSNTNKPIT 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID KG I +++ IH PP + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEKGPIGAEENWSIHRAPPSYEEQSNSTELLETGIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMSDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGILQRYKELKD 370
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG + LGRI+N GE ID K + ++ + P ++
Sbjct: 59 GLKRGLSVSNTNKPITVPVGTKTLGRIMNVLGEPIDEKGPIGAEENWSIHRAPPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMSDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGEEHYNVARGVQG----ILQRYKELK 369
>gi|167036417|ref|YP_001671648.1| F0F1 ATP synthase subunit beta [Pseudomonas putida GB-1]
gi|189081339|sp|B0KRA8.1|ATPB_PSEPG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|166862905|gb|ABZ01313.1| ATP synthase F1, beta subunit [Pseudomonas putida GB-1]
Length = 458
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 241/332 (72%), Positives = 285/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR VVDTG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P F++Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERRGIHQPAPSFADQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA+EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKEGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G EHY A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGNEHYDTARGVQYVLQRYKELKD 371
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 140/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G ID + R + + AP D+
Sbjct: 59 EGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERRGIHQPAPSFADQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 EGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 346 NVIGNEHYDTARG----VQYVLQRYKELK 370
>gi|330812735|ref|YP_004357197.1| ATP synthase subunit beta [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423700207|ref|ZP_17674697.1| ATP synthase F1, beta subunit [Pseudomonas fluorescens Q8r1-96]
gi|327380843|gb|AEA72193.1| putative ATP synthase, beta chain [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|388004415|gb|EIK65728.1| ATP synthase F1, beta subunit [Pseudomonas fluorescens Q8r1-96]
Length = 458
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 287/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G+T G+KR V+D+G I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGIVRTIAMGSTEGLKRGLDVIDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IDTEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGQEHYDTARGVQYVLQRYKELKD 371
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 140/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLDVIDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIDTEERWGIHRPAPSFAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 EGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 346 NVIGQEHYDTARG----VQYVLQRYKELK 370
>gi|375110075|ref|ZP_09756311.1| F0F1 ATP synthase subunit beta [Alishewanella jeotgali KCTC 22429]
gi|374569824|gb|EHR40971.1| F0F1 ATP synthase subunit beta [Alishewanella jeotgali KCTC 22429]
Length = 461
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 241/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G VR IA G+T+G++R T V +TGK I PVG TLGRI+NVLG+PID G
Sbjct: 43 EVQQQLGGGTVRAIALGSTDGLRRGTSVTNTGKAIQVPVGKATLGRIMNVLGEPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q +N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERWSIHRAAPSYEDQAASNALLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF+HLD+T+VLSR IA LGIYPAIDPL+S
Sbjct: 283 RITSTKTGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRNIASLGIYPAIDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY+VA V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGKEHYEVARGVQTVLQRYKELKD 374
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 158/367 (43%), Gaps = 25/367 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L +G T K ++PVG LGRI+N GE ID + R ++ +
Sbjct: 55 AIALGSTDGLRRGTSVTNTGKAIQVPVGKATLGRIMNVLGEPIDEAGPIGEEERWSIHRA 114
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP D+ + N L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 115 APSYEDQAASNALLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 174
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++K N +D +V + + TG T+ E FRD
Sbjct: 175 YSVFAGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRD 234
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L D++ ++ A ++S LL R P + L E + +
Sbjct: 235 EGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------Q 281
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P S D + L N+ + PAI+ S
Sbjct: 282 ERITSTKTGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRNIASLGIYPAIDPLDS 341
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEK 519
SR V G Y++ + ++ +L +Y+EL+ +L +T +Y K
Sbjct: 342 TSRQLDPLVIGKEHYEVARG----VQTVLQRYKELKDIIAILGMDELSDEDRTTVYRARK 397
Query: 520 ISLLMKQ 526
I + Q
Sbjct: 398 IQRFLSQ 404
>gi|398997433|ref|ZP_10700258.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM21]
gi|398124075|gb|EJM13598.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM21]
Length = 459
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 287/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V+D+G I PVG TLGRI++VLG+PID G
Sbjct: 41 EVQQQLGDGVVRTIAMGSTEGLKRGLDVIDSGSAISVPVGKATLGRIMDVLGNPIDEAGP 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+++++ IH P F+ Q N++LETGIK IDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IDTEERWGIHRPAPTFAEQAGGNDLLETGIKAIDLVCPFTKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPAIDPL+S
Sbjct: 281 RITSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAIDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G++HY A V++ LQ+YKELKD
Sbjct: 341 SRQLDPNVIGQDHYDTARGVQYVLQRYKELKD 372
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 142/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 60 EGLKRGLDVIDSGSAISVPVGKATLGRIMDVLGNPIDEAGPIDTEERWGIHRPAPTFAEQ 119
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK+ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 120 AGGNDLLETGIKAIDLVCPFTKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 179
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 180 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 239
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGTL------QERITSTK 286
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
NG++T+ + D+T P + D + L ++ + PAI+ S SR
Sbjct: 287 NGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAIDPLDSTSRQLDP 346
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 347 NVIGQDHYDTARG----VQYVLQRYKELK 371
>gi|406938998|gb|EKD72106.1| hypothetical protein ACD_46C00005G0002 [uncultured bacterium]
Length = 461
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/356 (70%), Positives = 295/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + + + + +K I +VQQQIG+ IVRTIA G T+G++R V +TGKPI+
Sbjct: 19 VEFPQQTVPRIYDALKVKEKNLILEVQQQIGDGIVRTIAMGTTDGLQRGLNVENTGKPIM 78
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLGD ID +G IN+ + PIH P F+ Q + +LETGIKVIDL+
Sbjct: 79 VPVGKPTLGRIMNVLGDAIDEQGPINTDQFLPIHRPAPTFAEQAPSQELLETGIKVIDLI 138
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFY EMKES
Sbjct: 139 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFTGVGERTREGNDFYLEMKES 198
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
VLDKV+L+YGQMNEP GNRLRVALTGL+IAE FR+ GKDVLLF+DNI+R+TL+G EVSA
Sbjct: 199 QVLDKVALVYGQMNEPPGNRLRVALTGLTIAESFRDEGKDVLLFVDNIFRYTLSGVEVSA 258
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 259 LLGRIPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 318
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSRQIAELGIYPAIDPL+S S+QLDP IVG+EHY+VA V+ LQ+YKELKD
Sbjct: 319 ATVVLSRQIAELGIYPAIDPLDSTSRQLDPLIVGQEHYEVALAVQKTLQRYKELKD 374
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 139/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI+N G+ ID + + + AP ++
Sbjct: 63 GLQRGLNVENTGKPIMVPVGKPTLGRIMNVLGDAIDEQGPINTDQFLPIHRPAPTFAEQA 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 123 PSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFTGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + TG TI E FRD G+D L+
Sbjct: 183 ERTREGNDFYLEMKESQVLDKVALVYGQMNEPPGNRLRVALTGLTIAESFRDEGKDVLLF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ + ++S LL R P V Y L E + +++I +
Sbjct: 243 VDNIFRYTLSGVEVSALLGR------IPSAVGY-QPTLAEEMGVL------QERITSTKT 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PAI+ S SR
Sbjct: 290 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAIDPLDSTSRQLDPL 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y++ ++ L +Y+EL+
Sbjct: 350 IVGQEHYEVALA----VQKTLQRYKELK 373
>gi|104784434|ref|YP_610932.1| F0F1 ATP synthase subunit beta [Pseudomonas entomophila L48]
gi|122985703|sp|Q1I2I7.1|ATPB_PSEE4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|95113421|emb|CAK18149.1| ATP synthase F1, beta subunit [Pseudomonas entomophila L48]
Length = 458
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 285/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR VVDT I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVVDTKAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERRGIHRKAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G EHY+ A +V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGNEHYETARQVQYVLQRYKELKD 371
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 143/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T+ +PVG LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLDVVDTKAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERRGIHRKAPSFAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 EGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ ++ ++ +L +Y+EL+
Sbjct: 346 NVIGNEHYETARQ----VQYVLQRYKELK 370
>gi|398841326|ref|ZP_10598549.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM102]
gi|398860574|ref|ZP_10616222.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM79]
gi|398108834|gb|EJL98783.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM102]
gi|398234851|gb|EJN20712.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM79]
Length = 459
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 287/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V D+G I PVG TLGRI++VLG+PID G
Sbjct: 41 EVQQQLGDGVVRTIAMGSTEGLKRGLEVTDSGTAISVPVGKATLGRIMDVLGNPIDEAGP 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IDTEERWGIHRPAPTFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 281 RITSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G++HY A V++ LQ+YKELKD
Sbjct: 341 SRQLDPNVIGQDHYDTARGVQYVLQRYKELKD 372
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 142/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 60 EGLKRGLEVTDSGTAISVPVGKATLGRIMDVLGNPIDEAGPIDTEERWGIHRPAPTFAEQ 119
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 120 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 179
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 180 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 239
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGTL------QERITSTK 286
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
NG++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 287 NGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 346
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 347 NVIGQDHYDTARG----VQYVLQRYKELK 371
>gi|339490152|ref|YP_004704680.1| F0F1 ATP synthase subunit beta [Pseudomonas putida S16]
gi|431799991|ref|YP_007226894.1| F0F1 ATP synthase subunit beta [Pseudomonas putida HB3267]
gi|338840995|gb|AEJ15800.1| F0F1 ATP synthase, beta subunit [Pseudomonas putida S16]
gi|430790756|gb|AGA70951.1| F0F1 ATP synthase subunit beta [Pseudomonas putida HB3267]
Length = 458
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR VVD+G I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLEVVDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P F++Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERRGIHQPAPSFADQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA+EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKEGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G EHY+ A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGNEHYETARGVQYVLQRYKELKD 371
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 143/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + + +PVG LGRI++ G ID + R + + AP D+
Sbjct: 59 EGLKRGLEVVDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERRGIHQPAPSFADQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 EGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 346 NVIGNEHYETARG----VQYVLQRYKELK 370
>gi|407698231|ref|YP_006823019.1| ATP synthase F1 subunit beta [Alcanivorax dieselolei B5]
gi|407255569|gb|AFT72676.1| ATP synthase F1, beta subunit [Alcanivorax dieselolei B5]
Length = 461
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 292/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E N+ K + + + + +VQQQ+G+ +VR+IA G+T G+KR V DTG+ I
Sbjct: 16 VEFPRDNVPKVYDALTVDGTETTLEVQQQLGDGVVRSIAMGSTEGLKRGLPVTDTGEAIQ 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G I +++ PIH P +++Q N +LETGIKVIDL+
Sbjct: 76 VPVGTKTLGRIMDVLGRPIDEAGPIGEEERMPIHRKAPTYADQAATNELLETGIKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA GIYPAIDPL+S S+QLDP ++G EHY+ A V+ LQ+YKELKD
Sbjct: 316 ATVVLSRDIASKGIYPAIDPLDSTSRQLDPLVIGHEHYEAARGVQTVLQRYKELKD 371
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 149/336 (44%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
++ + + L +G T + ++PVG + LGRI++ G ID + R + +
Sbjct: 52 SIAMGSTEGLKRGLPVTDTGEAIQVPVGTKTLGRIMDVLGRPIDEAGPIGEEERMPIHRK 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP D+ + NE L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 112 APTYADQAATNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 171
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++K N +D +V + + TG T+ E FRD
Sbjct: 172 FSVFAGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRD 231
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L D++ ++ A ++S LL R P V Y L E + +
Sbjct: 232 EGRDVLFFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------Q 278
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L ++ + PAI+ S
Sbjct: 279 ERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASKGIYPAIDPLDS 338
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y+ + ++ +L +Y+EL+
Sbjct: 339 TSRQLDPLVIGHEHYEAARG----VQTVLQRYKELK 370
>gi|284007073|emb|CBA72348.1| F0F1 ATP synthase subunit beta [Arsenophonus nasoniae]
Length = 460
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/345 (71%), Positives = 289/345 (83%), Gaps = 1/345 (0%)
Query: 568 FRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRI 627
+IN K + I +VQQQ+G +VR IA G ++G+KR VVD PI PVG TLGRI
Sbjct: 30 LEVINGKEKL-ILEVQQQLGGGVVRCIAMGTSDGLKRGLDVVDLAHPIEVPVGKATLGRI 88
Query: 628 LNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGL 687
+NVLGDPID KGEI +++ IH P + + + +LETGIKV+DL+CPF KGGK+GL
Sbjct: 89 MNVLGDPIDMKGEIGEEERWAIHRAAPSYEDLSNSTELLETGIKVMDLICPFAKGGKVGL 148
Query: 688 FGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYG 747
FGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YG
Sbjct: 149 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 208
Query: 748 QMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY 807
QMNEP GNRLRVALTGL+IAE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGY
Sbjct: 209 QMNEPPGNRLRVALTGLTIAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY 268
Query: 808 QPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAE 867
QPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA
Sbjct: 269 QPTLAEEMGVLQERITSTKAGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAS 328
Query: 868 LGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 329 LGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKD 373
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 23/313 (7%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDS 250
E+PVG LGRI+N G+ ID K + + R + + AP D + E L TGIK +D
Sbjct: 77 EVPVGKATLGRIMNVLGDPIDMKGEIGEEERWAIHRAAPSYEDLSNSTELLETGIKVMDL 136
Query: 251 MIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKY 309
+ P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 137 ICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTD 196
Query: 310 YNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQIS 369
N +D +V + + TG TI E FRD G+D L+ D++ ++ A ++S
Sbjct: 197 SNVLDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLLFIDNIYRYTLAGTEVS 256
Query: 370 LLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGD 429
LL R P + L E + +++I + G++T+ + D
Sbjct: 257 ALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKAGSITSVQAVYVPADD 303
Query: 430 VTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSG 484
+T P + D + L + + PA++ S SR V G Y + +
Sbjct: 304 LTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARG--- 360
Query: 485 DIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 361 -VQSILQRYQELK 372
>gi|312963998|ref|ZP_07778469.1| ATP synthase subunit beta [Pseudomonas fluorescens WH6]
gi|311282033|gb|EFQ60643.1| ATP synthase subunit beta [Pseudomonas fluorescens WH6]
Length = 458
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 287/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V+D+G I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVIDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IDTEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGQEHYDTARGVQYVLQRYKELKD 371
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 140/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLDVIDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIDTEERWGIHRPAPSFAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 EGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 346 NVIGQEHYDTARG----VQYVLQRYKELK 370
>gi|440738473|ref|ZP_20918004.1| F0F1 ATP synthase subunit beta [Pseudomonas fluorescens BRIP34879]
gi|447919180|ref|YP_007399748.1| F0F1 ATP synthase subunit beta [Pseudomonas poae RE*1-1-14]
gi|440381009|gb|ELQ17555.1| F0F1 ATP synthase subunit beta [Pseudomonas fluorescens BRIP34879]
gi|445203043|gb|AGE28252.1| F0F1 ATP synthase subunit beta [Pseudomonas poae RE*1-1-14]
Length = 458
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 287/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V+D+G I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVIDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IDTEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGQEHYDTARGVQYVLQRYKELKD 371
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 140/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLDVIDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIDTEERWGIHRPAPSFAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 EGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 346 NVIGQEHYDTARG----VQYVLQRYKELK 370
>gi|431929418|ref|YP_007242452.1| ATP synthase F1 subunit beta [Pseudomonas stutzeri RCH2]
gi|431827705|gb|AGA88822.1| ATP synthase, F1 beta subunit [Pseudomonas stutzeri RCH2]
Length = 458
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 241/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G+T G+KR VV+TG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGIVRTIAMGSTEGLKRGLDVVNTGTGISVPVGKQTLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P ++ Q N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWTIHRAAPSYAEQAGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA+EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKNGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 340 SRQLDPLVIGQEHYDTARGVQYVLQRYKELKD 371
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 144/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG + LGRI++ G ID + R T+ + AP ++
Sbjct: 59 EGLKRGLDVVNTGTGISVPVGKQTLGRIMDVLGNPIDEAGPIGEEERWTIHRAAPSYAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
NE L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
NG++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 NGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 346 LVIGQEHYDTARG----VQYVLQRYKELK 370
>gi|398878953|ref|ZP_10634057.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM67]
gi|398883283|ref|ZP_10638240.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM60]
gi|398196945|gb|EJM83935.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM60]
gi|398197862|gb|EJM84834.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM67]
Length = 459
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V D+G I PVG TLGRI++VLG+PID G
Sbjct: 41 EVQQQLGDGVVRTIAMGSTEGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IATEERWGIHRPAPTFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 281 RITSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G++HY A V++ LQ+YKELKD
Sbjct: 341 SRQLDPNVIGQDHYDTARGVQYVLQRYKELKD 372
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 142/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 60 EGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIATEERWGIHRPAPTFAEQ 119
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 120 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 179
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 180 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 239
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGTL------QERITSTK 286
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
NG++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 287 NGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 346
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 347 NVIGQDHYDTARG----VQYVLQRYKELK 371
>gi|261856899|ref|YP_003264182.1| ATP synthase F1 subunit beta [Halothiobacillus neapolitanus c2]
gi|261837368|gb|ACX97135.1| ATP synthase F1, beta subunit [Halothiobacillus neapolitanus c2]
Length = 462
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/356 (68%), Positives = 290/356 (81%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + I ++ I +VQQQIG+ +VR IA G+++G+KR V+TG PI
Sbjct: 16 VEFPRDAVPKVYDAIKIEQTGLIVEVQQQIGDGVVRGIAMGSSDGLKRGMTAVNTGSPIQ 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PIDN G++ +K IH PP F Q + +LETGIKVIDLL
Sbjct: 76 VPVGKGTLGRIMDVLGHPIDNAGDVACDEKWSIHRKPPTFDEQANSTELLETGIKVIDLL 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIA+EH G SVF GVGER+REGNDFYHEMK+
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFAGVGERTREGNDFYHEMKDG 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
VLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G+DVL+FIDNIYR+TLAGTEVSA
Sbjct: 196 GVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLMFIDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPAIDPL+S S+QLDP +VG+ HY VA V+ LQ+YKELKD
Sbjct: 316 ATVVLSRDIASLGIYPAIDPLDSTSRQLDPQVVGDTHYSVARSVQKTLQRYKELKD 371
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 150/363 (41%), Gaps = 33/363 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T ++PVG LGRI++ G IDN + ++ + P ++
Sbjct: 60 GLKRGMTAVNTGSPIQVPVGKGTLGRIMDVLGHPIDNAGDVACDEKWSIHRKPPTFDEQA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 120 NSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K +D +V + + TG T+ E+FRD G+D L+
Sbjct: 180 ERTREGNDFYHEMKDGGVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLMF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PAI+ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAIDPLDSTSRQLDPQ 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE------SFSKFSSDLDIVTKTQLYNGEKISLL 523
V G Y + + ++ L +Y+EL+ + S D K + KI
Sbjct: 347 VVGDTHYSVARS----VQKTLQRYKELKDIIAILGMDELSDD----DKATVSRARKIQRF 398
Query: 524 MKQ 526
M Q
Sbjct: 399 MSQ 401
>gi|18033075|gb|AAL56979.1|AF326331_1 ATP synthase [Pasteurella canis]
Length = 431
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/356 (69%), Positives = 295/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + +N++ + + +VQQQ+G IVR IA G+++G+KR V +T PI
Sbjct: 5 VEFPQDAVPKVYDALNVETGLVL-EVQQQLGGGIVRCIAMGSSDGLKRGLTVTNTNSPIS 63
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I +++ IH PP + Q + +LETGIKVIDL+
Sbjct: 64 VPVGTKTLGRIMNVLGEPIDEQGPIGAEENWSIHRAPPSYEEQSNSTELLETGIKVIDLV 123
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 124 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 183
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVS +YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 184 NVLDKVSPVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 243
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 244 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 303
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPLES S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 304 STVVLSRQIASLGIYPAVDPLESTSRQLDPLVVGEEHYNVARGVQTTLQRYKELKD 359
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 23/327 (7%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G T +PVG + LGRI+N GE ID + + ++ + P ++ +
Sbjct: 49 LKRGLTVTNTNSPISVPVGTKTLGRIMNVLGEPIDEQGPIGAEENWSIHRAPPSYEEQSN 108
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK ID + P KG + + G GKT ++ I N + ++ +G+
Sbjct: 109 STELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGE 168
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++K N +D V + + TG T+ E FRD G+D L
Sbjct: 169 RTREGNDFYHEMKDSNVLDKVSPVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFV 228
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P V Y L E + +++I + G
Sbjct: 229 DNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKTG 275
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L + + PA++ S SR V
Sbjct: 276 SITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLESTSRQLDPLV 335
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y + + ++ L +Y+EL+
Sbjct: 336 VGEEHYNVARG----VQTTLQRYKELK 358
>gi|343518708|ref|ZP_08755698.1| ATP synthase F1, beta subunit [Haemophilus pittmaniae HK 85]
gi|343393623|gb|EGV06178.1| ATP synthase F1, beta subunit [Haemophilus pittmaniae HK 85]
Length = 457
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/356 (68%), Positives = 296/356 (83%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +TG PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGTSDGLKRGLKVENTGNPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +GEI +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDERGEIGAEENWSIHRAAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKD 370
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID + + + ++ + AP ++
Sbjct: 59 GLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDERGEIGAEENWSIHRAAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|409422367|ref|ZP_11259468.1| F0F1 ATP synthase subunit beta [Pseudomonas sp. HYS]
Length = 458
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 285/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V DTG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVADTGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P F++Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWGIHRDAPSFADQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G EHY+ A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGTEHYETARGVQYVLQRYKELKD 371
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 141/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G ID + R + + AP D+
Sbjct: 59 EGLKRGLDVADTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERWGIHRDAPSFADQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 EGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 346 NVIGTEHYETARG----VQYVLQRYKELK 370
>gi|399155013|ref|ZP_10755080.1| F0F1 ATP synthase subunit beta [gamma proteobacterium SCGC
AAA007-O20]
Length = 403
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/357 (69%), Positives = 298/357 (83%), Gaps = 2/357 (0%)
Query: 557 IELFEINIIKYFRIINL-KNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPI 615
+E +I K + +++ K N+++ +VQQQ+G+N+VR IA G + G++R V +TGK I
Sbjct: 16 VEFPSDSIPKVYNALHVTKANLTL-EVQQQLGDNVVRAIAMGGSEGLQRGLEVTNTGKSI 74
Query: 616 LTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDL 675
PVG+ TLGRI++VLG PIDN G+I K++ IH P + +LETGIKVIDL
Sbjct: 75 TVPVGEKTLGRIMDVLGKPIDNAGDIGQKEEWEIHRAAPSYDELAPAAELLETGIKVIDL 134
Query: 676 LCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKE 735
+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH+G SVF GVGER+REGNDFYHEMK+
Sbjct: 135 ICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHEGYSVFAGVGERTREGNDFYHEMKD 194
Query: 736 SNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVS 795
SNVLDKVSL+YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLFIDNIYR+TLAGTEVS
Sbjct: 195 SNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLLFIDNIYRYTLAGTEVS 254
Query: 796 AMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHL 855
A+LGR PSAVGYQPTLA EMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HL
Sbjct: 255 ALLGRMPSAVGYQPTLASEMGALQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHL 314
Query: 856 DSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
D+T+VLSRQ+AELGIYPA+DPL+S S+QLDP IVG+EHY VA V+ LQ+YKELKD
Sbjct: 315 DATVVLSRQVAELGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQGVLQRYKELKD 371
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 143/338 (42%), Gaps = 23/338 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + + L +G + T K +PVG + LGRI++ G+ IDN K + +
Sbjct: 52 AIAMGGSEGLQRGLEVTNTGKSITVPVGEKTLGRIMDVLGKPIDNAGDIGQKEEWEIHRA 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP + E L TGIK ID + P KG + + G GKT ++ I N
Sbjct: 112 APSYDELAPAAELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHEG 171
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++K N +D +V + + TG T+ EYFRD
Sbjct: 172 YSVFAGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEYFRD 231
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L+ D++ ++ A ++S LL R P + + L ER
Sbjct: 232 EGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQER----------- 280
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
I + G++T+ + D+T P + D + L + PA++ S
Sbjct: 281 --ITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQVAELGIYPAVDPLDS 338
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESF 499
SR + G Y + + + G +L +Y+EL+
Sbjct: 339 TSRQLDPLIVGQEHYDVARGVQG----VLQRYKELKDI 372
>gi|290473116|ref|YP_003465977.1| membrane-bound ATP synthase, F1 sector subunit beta [Xenorhabdus
bovienii SS-2004]
gi|289172410|emb|CBJ79177.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Xenorhabdus
bovienii SS-2004]
Length = 460
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 244/361 (67%), Positives = 296/361 (81%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + ++ K + + +KN+ + +VQQQ+G IVR IA G ++G++R +D
Sbjct: 13 VVDVEFPQDSVPKVYNALEVKNSEEKLVLEVQQQLGGGIVRCIAMGTSDGLRRGLDAIDL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
G PI PVG TLGRI+NVLGDPID KGEI +++ IH P + + +LETGIK
Sbjct: 73 GHPIEVPVGKATLGRIMNVLGDPIDMKGEIGEEERWSIHRTAPSYEELSSSQELLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
V+DL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM +SNVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAG
Sbjct: 193 EMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 139/313 (44%), Gaps = 23/313 (7%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDS 250
E+PVG LGRI+N G+ ID K + + R ++ + AP + S E L TGIK +D
Sbjct: 77 EVPVGKATLGRIMNVLGDPIDMKGEIGEEERWSIHRTAPSYEELSSSQELLETGIKVMDL 136
Query: 251 MIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKY 309
+ P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 137 ICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTD 196
Query: 310 YNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQIS 369
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++S
Sbjct: 197 SNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVS 256
Query: 370 LLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGD 429
LL R P + L E + +++I + G++T+ + D
Sbjct: 257 ALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPADD 303
Query: 430 VTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSG 484
+T P + D + L + + PA++ S SR V G Y + +
Sbjct: 304 LTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARG--- 360
Query: 485 DIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 361 -VQSILQRYQELK 372
>gi|374261996|ref|ZP_09620570.1| hypothetical protein LDG_6971 [Legionella drancourtii LLAP12]
gi|363537591|gb|EHL31011.1| hypothetical protein LDG_6971 [Legionella drancourtii LLAP12]
Length = 459
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G T+G+KR +TG PI PVG TLGRI++VLG P+D+ G
Sbjct: 41 EVQQQLGDGVVRTIAMGTTDGLKRGLKAQNTGHPIQVPVGKKTLGRIMDVLGRPVDDAGP 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I++ + IH P + Q + +LETGIKVIDLLCPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IDADEHWAIHRKAPSYEEQAGSQELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAG EVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGVEVSALLGRMPSAVGYQPTLAEEMGMLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELGIYPA+DPL+S
Sbjct: 281 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+YKELKD
Sbjct: 341 SRQLDPLVVGQEHYDTARRVQQTLQRYKELKD 372
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI++ G +D+ + + AP ++
Sbjct: 61 GLKRGLKAQNTGHPIQVPVGKKTLGRIMDVLGRPVDDAGPIDADEHWAIHRKAPSYEEQA 120
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 121 GSQELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 180
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 181 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 240
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 241 VDNIYRYTLAGVEVSALLGR------MPSAVGY-------QPTLAEEMGMLQERITSTKT 287
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 288 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPL 347
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y ++ ++ L +Y+EL+
Sbjct: 348 VVGQEHYDTARR----VQQTLQRYKELK 371
>gi|392423372|ref|YP_006459976.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri CCUG 29243]
gi|452750213|ref|ZP_21949965.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri NF13]
gi|390985560|gb|AFM35553.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri CCUG 29243]
gi|452005863|gb|EMD98143.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri NF13]
Length = 458
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 241/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G+T G+KR VV+TG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGIVRTIAMGSTEGLKRGLDVVNTGTGISVPVGKQTLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P ++ Q N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWTIHRAAPSYAEQAGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA+EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKNGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 340 SRQLDPLVIGQEHYDTARGVQYVLQRYKELKD 371
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 144/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG + LGRI++ G ID + R T+ + AP ++
Sbjct: 59 EGLKRGLDVVNTGTGISVPVGKQTLGRIMDVLGNPIDEAGPIGEEERWTIHRAAPSYAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
NE L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
NG++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 NGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 346 LVIGQEHYDTARG----VQYVLQRYKELK 370
>gi|269468571|gb|EEZ80220.1| F0F1-type ATP synthase, beta subunit [uncultured SUP05 cluster
bacterium]
Length = 459
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/349 (70%), Positives = 289/349 (82%), Gaps = 6/349 (1%)
Query: 570 IINLKNNISINK------VQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCT 623
I N+ N +++ + VQQQ+G+N+VR IA G++ G+KR V D G I PVG T
Sbjct: 23 IPNIYNALTVTETSLTLEVQQQLGDNVVRAIAMGSSEGLKRGLEVTDNGSAIKVPVGTKT 82
Query: 624 LGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGG 683
LGRI+NVLG+PIDN G+I+ + + IH P + +LETGIKVIDL+CPF KGG
Sbjct: 83 LGRIMNVLGEPIDNAGDIDPEAEWEIHRSAPPYDELAPAAELLETGIKVIDLVCPFAKGG 142
Query: 684 KIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVS 743
K+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMKESNVLDKVS
Sbjct: 143 KVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKVS 202
Query: 744 LIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPS 803
L+YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PS
Sbjct: 203 LVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPS 262
Query: 804 AVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSR 863
AVGYQPTLA EMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR
Sbjct: 263 AVGYQPTLASEMGALQERITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSR 322
Query: 864 QIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
Q+AELGIYPA+DPL+S S+QLDP IVGEEHY VA V+ LQ+YKELKD
Sbjct: 323 QVAELGIYPAVDPLDSTSRQLDPLIVGEEHYNVARGVQGVLQRYKELKD 371
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 143/336 (42%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + + L +G + ++PVG + LGRI+N GE IDN + + +
Sbjct: 52 AIAMGSSEGLKRGLEVTDNGSAIKVPVGTKTLGRIMNVLGEPIDNAGDIDPEAEWEIHRS 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP + E L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 112 APPYDELAPAAELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 171
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++K N +D +V + + TG T+ EYFRD
Sbjct: 172 YSVFAGVGERTREGNDFYHEMKESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEYFRD 231
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L+ D++ ++ A ++S LL R P + + L ER
Sbjct: 232 EGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQER----------- 280
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
I + G++T+ + D+T P + D + L + PA++ S
Sbjct: 281 --ITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQVAELGIYPAVDPLDS 338
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR + G Y + + + G +L +Y+EL+
Sbjct: 339 TSRQLDPLIVGEEHYNVARGVQG----VLQRYKELK 370
>gi|383936109|ref|ZP_09989539.1| ATP synthase subunit beta 2 [Rheinheimera nanhaiensis E407-8]
gi|383702865|dbj|GAB59630.1| ATP synthase subunit beta 2 [Rheinheimera nanhaiensis E407-8]
Length = 448
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G VR IA G T+G++R V +TGK I PVG TLGRI+NVLG+PID G
Sbjct: 30 EVQQQLGGGTVRAIALGTTDGLRRGAAVANTGKAIQVPVGKATLGRIMNVLGEPIDEAGP 89
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q +N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 90 IGEEERWSIHRAAPSYEDQAASNALLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 149
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 150 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVA 209
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 210 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGALQE 269
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF+HLD+T+VLSR IA LGIYPAIDPL+S
Sbjct: 270 RITSTKTGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRNIASLGIYPAIDPLDST 329
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY+VA V+ LQ+YKELKD
Sbjct: 330 SRQLDPLVIGKEHYEVARGVQSVLQRYKELKD 361
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 159/367 (43%), Gaps = 25/367 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L +G T K ++PVG LGRI+N GE ID + R ++ +
Sbjct: 42 AIALGTTDGLRRGAAVANTGKAIQVPVGKATLGRIMNVLGEPIDEAGPIGEEERWSIHRA 101
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP D+ + N L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 102 APSYEDQAASNALLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 161
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++K N +D +V + + TG T+ E FRD
Sbjct: 162 YSVFAGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRD 221
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L D++ ++ A ++S LL R P V Y L E + +
Sbjct: 222 EGRDVLFFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGAL------Q 268
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P S D + L N+ + PAI+ S
Sbjct: 269 ERITSTKTGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRNIASLGIYPAIDPLDS 328
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEK 519
SR V G Y++ + ++ +L +Y+EL+ +L +T +Y K
Sbjct: 329 TSRQLDPLVIGKEHYEVARG----VQSVLQRYKELKDIIAILGMDELSDEDRTTVYRARK 384
Query: 520 ISLLMKQ 526
I + Q
Sbjct: 385 IQRFLSQ 391
>gi|419803114|ref|ZP_14328288.1| ATP synthase F1, beta subunit [Haemophilus parainfluenzae HK262]
gi|385188284|gb|EIF35771.1| ATP synthase F1, beta subunit [Haemophilus parainfluenzae HK262]
Length = 457
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/356 (68%), Positives = 298/356 (83%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +TG PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGTSDGLKRGLKVENTGNPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +GEI++++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEQGEIDAEESWSIHRPAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKD 370
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 145/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID + + + ++ + AP ++
Sbjct: 59 GLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEQGEIDAEESWSIHRPAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|398900877|ref|ZP_10649864.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM50]
gi|398180706|gb|EJM68284.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM50]
Length = 459
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 287/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V D+G I PVG TLGRI++VLG+PID G
Sbjct: 41 EVQQQLGDGVVRTIAMGSTEGLKRGLEVNDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IDTEERWGIHRPAPTFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 281 RITSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G++HY A V++ LQ+YKELKD
Sbjct: 341 SRQLDPNVIGQDHYDTARGVQYVLQRYKELKD 372
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 142/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 60 EGLKRGLEVNDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIDTEERWGIHRPAPTFAEQ 119
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 120 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 179
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 180 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 239
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGTL------QERITSTK 286
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
NG++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 287 NGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 346
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 347 NVIGQDHYDTARG----VQYVLQRYKELK 371
>gi|326797428|ref|YP_004315248.1| ATP synthase subunit beta [Marinomonas mediterranea MMB-1]
gi|326548192|gb|ADZ93412.1| ATP synthase subunit beta [Marinomonas mediterranea MMB-1]
Length = 458
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 296/356 (83%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E N+ K + + ++ + +VQQQ+G+ IVRTIA G+T G++R V +T K +
Sbjct: 16 VEFPRDNVPKVYDALTIEGKELVLEVQQQLGDGIVRTIAMGSTEGMRRGLAVDNTNKAVS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG+PID KG I +++ IH P +++Q +N +LETGIKVIDL+
Sbjct: 76 VPVGTKTLGRIMDVLGNPIDEKGPIGEEERWSIHRSAPSYADQSSSNELLETGIKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM ES
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTES 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 196 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF+HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFSHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPAIDPL+S S+QLDP ++G+EHY VA V+ LQ+YKELKD
Sbjct: 316 ATVVLSRDIASLGIYPAIDPLDSTSRQLDPLVIGQEHYDVARGVQMVLQRYKELKD 371
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 146/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ + +G T K +PVG + LGRI++ G ID K + R ++ + AP D+
Sbjct: 59 EGMRRGLAVDNTNKAVSVPVGTKTLGRIMDVLGNPIDEKGPIGEEERWSIHRSAPSYADQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
S NE L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 SSSNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 GERTREGNDFYHEMTESNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P S D + L ++ + PAI+ S SR
Sbjct: 286 TGSITSVQAVYVPADDLTDPSPATTFSHLDATVVLSRDIASLGIYPAIDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++++L +Y+EL+
Sbjct: 346 LVIGQEHYDVARG----VQMVLQRYKELK 370
>gi|398869667|ref|ZP_10625025.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM74]
gi|398210516|gb|EJM97160.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM74]
Length = 459
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR VVD+G I PVG TLGRI++VLG+PID G
Sbjct: 41 EVQQQLGDGVVRTIAMGSTEGLKRGLDVVDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 281 RITSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G++HY A V++ LQ+YKELKD
Sbjct: 341 SRQLDPNVIGQDHYDTARGVQYVLQRYKELKD 372
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 157/387 (40%), Gaps = 30/387 (7%)
Query: 117 IIRFAYNIEYDYFDPRCLNQTLNIKFANNTVLSGQINGTTGYEEAAAQGFVAVLIDDLKN 176
II ++E+ + L ++ A T L Q G A G +
Sbjct: 9 IIGAVIDVEFPRDSVPSIYNALTVQSAAGTTLEVQQQLGDGVVRTIAMG-------STEG 61
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 62 LKRGLDVVDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIATEERWGIHRPAPSFAEQAG 121
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +G+
Sbjct: 122 GNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGE 181
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 182 RTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFV 241
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + L E + +++I + G
Sbjct: 242 DNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKEG 288
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L ++ + PA++ S SR V
Sbjct: 289 SITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNV 348
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y + ++ +L +Y+EL+
Sbjct: 349 IGQDHYDTARG----VQYVLQRYKELK 371
>gi|407801815|ref|ZP_11148658.1| F0F1 ATP synthase subunit beta [Alcanivorax sp. W11-5]
gi|407024132|gb|EKE35876.1| F0F1 ATP synthase subunit beta [Alcanivorax sp. W11-5]
Length = 461
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 244/356 (68%), Positives = 291/356 (81%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ + + + ++ +VQQQ+G+ IVRTIA G+T G+KR V +T PI
Sbjct: 16 VEFPRESVPNVYDALTVSGADTVLEVQQQLGDGIVRTIAMGSTEGLKRGLDVANTNAPIQ 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G I +++ PIH P ++ Q N +LETGIKVIDL+
Sbjct: 76 VPVGKETLGRIMDVLGRPIDEAGPIGEQERMPIHRKAPTYAEQASGNELLETGIKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA GIYPAIDPL+S S+QLDP ++GEEHY A V+ LQ+YKELKD
Sbjct: 316 ATVVLSRDIAAKGIYPAIDPLDSTSRQLDPLVIGEEHYAAARGVQTVLQRYKELKD 371
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 153/360 (42%), Gaps = 25/360 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T ++PVG E LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLDVANTNAPIQVPVGKETLGRIMDVLGRPIDEAGPIGEQERMPIHRKAPTYAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
S NE L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 ASGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ PAI+ S SR
Sbjct: 286 TGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIAAKGIYPAIDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQ 526
V G Y + ++ +L +Y+EL+ +L KT + KI + Q
Sbjct: 346 LVIGEEHYAAARG----VQTVLQRYKELKDIIAILGMDELSEEDKTTVMRARKIERFLSQ 401
>gi|34500030|gb|AAQ73597.1| ATP synthase beta subunit [Pasteurella pneumotropica]
Length = 444
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/356 (68%), Positives = 296/356 (83%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +TG PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGTSDGLKRGLKVENTGNPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +GEI +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDERGEIGAEENWSIHRAAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKD 370
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID + + + ++ + AP ++
Sbjct: 59 GLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDERGEIGAEENWSIHRAAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|256575366|gb|ACU87651.1| AtpD [Gallibacterium anatis]
Length = 452
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/356 (68%), Positives = 294/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + +N++ + + +VQQQ+G +VR IA G+++G+KR V +TG PI
Sbjct: 16 VEFPQDAVPKVYEALNVETGLVL-EVQQQLGGGVVRCIAMGSSDGLKRGLSVTNTGSPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I K + IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTETLGRIMNVLGEPIDERGPIGEKARWSIHRAAPSYEEQANSTELLETGIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM+ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMQES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +V +EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPQVVRQEHYDVARGVQGILQRYKELKD 370
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG E LGRI+N GE ID + K R ++ + AP ++
Sbjct: 59 GLKRGLSVTNTGSPISVPVGTETLGRIMNVLGEPIDERGPIGEKARWSIHRAAPSYEEQA 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMQESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPQ 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V Y + + + G +L +Y+EL+
Sbjct: 346 VVRQEHYDVARGVQG----ILQRYKELK 369
>gi|406946673|gb|EKD77799.1| hypothetical protein ACD_42C00172G0003 [uncultured bacterium]
Length = 466
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 244/332 (73%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G T G++R +V +TG PI PVGD TLGRI+NVLG PID G
Sbjct: 45 EVQQQLGDGVVRTIAMGPTEGLRRGLVVENTGAPITIPVGDKTLGRIMNVLGQPIDELGP 104
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ + + PIH P F N ILETGIKV+DL PF KGGK+GLFGGAGVGKTVNMM
Sbjct: 105 VETDEYLPIHRKAPSFMELTGNTQILETGIKVLDLCIPFAKGGKVGLFGGAGVGKTVNMM 164
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA+EH G SVF GVGER+REGNDFYHEMKESNVLDKVSL+YGQMNEP GNRLRV
Sbjct: 165 ELIRNIAVEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKVSLVYGQMNEPPGNRLRVG 224
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAG EVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 225 LTGLTLAEKFRDEGRDVLLFIDNIYRYTLAGVEVSALLGRMPSAVGYQPTLAEEMGNLQE 284
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELGIYPAIDPL+S
Sbjct: 285 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAIDPLDSS 344
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP IVG EHY++A V+ LQ+YKELKD
Sbjct: 345 SRQLDPLIVGNEHYRIARAVQSTLQRYKELKD 376
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 134/312 (42%), Gaps = 23/312 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
IPVG + LGRI+N G+ ID + + AP M+ + L TGIK +D
Sbjct: 81 IPVGDKTLGRIMNVLGQPIDELGPVETDEYLPIHRKAPSFMELTGNTQILETGIKVLDLC 140
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
IP KG + + G GKT ++ I N + ++ +G++ + +++K
Sbjct: 141 IPFAKGGKVGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFAGVGERTREGNDFYHEMKES 200
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++S
Sbjct: 201 NVLDKVSLVYGQMNEPPGNRLRVGLTGLTLAEKFRDEGRDVLLFIDNIYRYTLAGVEVSA 260
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P + L E + +++I + G++T+ + D+
Sbjct: 261 LLGRMPSAVGY-------QPTLAEEMGNL------QERITSTKTGSITSIQAVYVPADDL 307
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P + D + L + PAI+ S SR + G Y+I +
Sbjct: 308 TDPSPATTFAHLDATVVLSRQIAELGIYPAIDPLDSSSRQLDPLIVGNEHYRIARA---- 363
Query: 486 IRIMLAQYRELE 497
++ L +Y+EL+
Sbjct: 364 VQSTLQRYKELK 375
>gi|398891358|ref|ZP_10644734.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM55]
gi|398187039|gb|EJM74393.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM55]
Length = 458
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 287/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR VVD+G I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVVDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IDTEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G +HY+ A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGNDHYETARGVQYVLQRYKELKD 371
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 141/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLDVVDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIDTEERWGIHRPAPSFAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 QGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 346 NVIGNDHYETARG----VQYVLQRYKELK 370
>gi|399523212|ref|ZP_10763870.1| ATP synthase F1, beta subunit [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399109015|emb|CCH40433.1| ATP synthase F1, beta subunit [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 458
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V TGK I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVNSTGKAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P ++ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEEQWEIHRAAPSYAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY+ A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGQEHYETARGVQYVLQRYKELKD 371
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 143/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T K +PVG LGRI++ G ID + + + + AP ++
Sbjct: 59 EGLKRGLDVNSTGKAISVPVGKATLGRIMDVLGNPIDEAGPIGEEEQWEIHRAAPSYAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 KGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 346 NVIGQEHYETARG----VQYVLQRYKELK 370
>gi|336313968|ref|ZP_08568890.1| ATP synthase, F1 beta subunit [Rheinheimera sp. A13L]
gi|335881907|gb|EGM79784.1| ATP synthase, F1 beta subunit [Rheinheimera sp. A13L]
Length = 461
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 241/332 (72%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G VRTIA G+T+G++R V +TGK I PVG TLGRI+NVLG+PID G
Sbjct: 43 EVQQQLGGGTVRTIALGSTDGLRRGAEVANTGKAIHVPVGKATLGRIMNVLGEPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++ PIH P + +Q +N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEDERMPIHRAAPSYEDQAASNALLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF+HLD+T+VLSR IA LGIYPAIDPL+S
Sbjct: 283 RITSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDATVVLSRNIASLGIYPAIDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGKEHYDTARGVQSVLQRYKELKD 374
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 150/359 (41%), Gaps = 25/359 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T K +PVG LGRI+N GE ID R + + AP D+
Sbjct: 63 GLRRGAEVANTGKAIHVPVGKATLGRIMNVLGEPIDEAGPIGEDERMPIHRAAPSYEDQA 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ N L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 123 ASNALLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 183 ERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 243 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P S D + L N+ + PAI+ S SR
Sbjct: 290 GSITSVQAVYVPADDLTDPSPATTFSHLDATVVLSRNIASLGIYPAIDPLDSTSRQLDPL 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQ 526
V G Y + ++ +L +Y+EL+ +L +T +Y KI + Q
Sbjct: 350 VIGKEHYDTARG----VQSVLQRYKELKDIIAILGMDELSDEDRTVVYRARKIQRFLSQ 404
>gi|110835587|ref|YP_694446.1| ATP synthase F0F1 subunit beta [Alcanivorax borkumensis SK2]
gi|118573503|sp|Q0VKX4.1|ATPB_ALCBS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|110648698|emb|CAL18174.1| ATP synthase, beta subunit [Alcanivorax borkumensis SK2]
Length = 460
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 242/356 (67%), Positives = 292/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + +++ + +VQQQ+G+ +VRTIA G+T G+KR V D G+PI
Sbjct: 16 VEFPREAVPKVYDALSVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLGVTDNGEPIQ 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G I +++ PIH P +++Q N +LETGIKVIDL+
Sbjct: 76 VPVGTKTLGRIMDVLGRPIDEAGPIGEEERMPIHRAAPTYADQAATNELLETGIKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+ LSR IA GIYPAIDPL+S S+QLDP ++G+EHY +A V+ LQ++KELKD
Sbjct: 316 STVSLSRDIASKGIYPAIDPLDSTSRQLDPLVIGQEHYDIARGVQTVLQRFKELKD 371
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 139/313 (44%), Gaps = 23/313 (7%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDS 250
++PVG + LGRI++ G ID + R + + AP D+ + NE L TGIK ID
Sbjct: 75 QVPVGTKTLGRIMDVLGRPIDEAGPIGEEERMPIHRAAPTYADQAATNELLETGIKVIDL 134
Query: 251 MIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKY 309
+ P KG + + G GKT ++ I N + ++ +G++ + +++K
Sbjct: 135 VCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMKD 194
Query: 310 YNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQIS 369
N +D +V + + TG T+ E FRD G+D L D++ ++ A ++S
Sbjct: 195 SNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVS 254
Query: 370 LLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGD 429
LL R P + L E + +++I + G++T+ + D
Sbjct: 255 ALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPADD 301
Query: 430 VTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSG 484
+T P + D + L ++ + PAI+ S SR V G Y I +
Sbjct: 302 LTDPSPATTFAHLDSTVSLSRDIASKGIYPAIDPLDSTSRQLDPLVIGQEHYDIARG--- 358
Query: 485 DIRIMLAQYRELE 497
++ +L +++EL+
Sbjct: 359 -VQTVLQRFKELK 370
>gi|146309620|ref|YP_001190085.1| F0F1 ATP synthase subunit beta [Pseudomonas mendocina ymp]
gi|166990373|sp|A4Y187.1|ATPB_PSEMY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|145577821|gb|ABP87353.1| ATP synthase F1, beta subunit [Pseudomonas mendocina ymp]
Length = 458
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V TGK I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVNSTGKAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P ++ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEEQWEIHRAAPSYAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY+ A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGQEHYETARGVQYVLQRYKELKD 371
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 143/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T K +PVG LGRI++ G ID + + + + AP ++
Sbjct: 59 EGLKRGLDVNSTGKAISVPVGKATLGRIMDVLGNPIDEAGPIGEEEQWEIHRAAPSYAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 KGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 346 NVIGQEHYETARG----VQYVLQRYKELK 370
>gi|421502490|ref|ZP_15949444.1| F0F1 ATP synthase subunit beta [Pseudomonas mendocina DLHK]
gi|400346922|gb|EJO95278.1| F0F1 ATP synthase subunit beta [Pseudomonas mendocina DLHK]
Length = 458
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V TGK I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVSSTGKAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P ++ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEEQWEIHRPAPSYAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY+ A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGQEHYETARGVQYVLQRYKELKD 371
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 143/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T K +PVG LGRI++ G ID + + + + AP ++
Sbjct: 59 EGLKRGLDVSSTGKAISVPVGKATLGRIMDVLGNPIDEAGPIGEEEQWEIHRPAPSYAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 KGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 346 NVIGQEHYETARG----VQYVLQRYKELK 370
>gi|170724356|ref|YP_001752044.1| F0F1 ATP synthase subunit beta [Pseudomonas putida W619]
gi|226740663|sp|B1JFU1.1|ATPB_PSEPW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|169762359|gb|ACA75675.1| ATP synthase F1, beta subunit [Pseudomonas putida W619]
Length = 458
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V+D+G I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLNVIDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P F++Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWGIHRDAPSFADQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G EHY+ A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGNEHYETARGVQYVLQRYKELKD 371
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 141/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + +PVG LGRI++ G ID + R + + AP D+
Sbjct: 59 EGLKRGLNVIDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERWGIHRDAPSFADQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 EGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 346 NVIGNEHYETARG----VQYVLQRYKELK 370
>gi|350421233|ref|XP_003492778.1| PREDICTED: ATP synthase subunit beta-like [Bombus impatiens]
Length = 460
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 242/332 (72%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVR IA G T+G++RN V++T PI PVG TLGRI+NVLGDP+DN G
Sbjct: 42 EVQQQLGGGIVRCIAMGVTDGLRRNLTVINTNHPIEVPVGTATLGRIMNVLGDPVDNAGP 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEQERWGIHRTAPSYEELSSSTELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMKESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFTGVGERTREGNDFYHEMKESNVLDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDCARGVQSILQRYQELKD 373
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 142/329 (43%), Gaps = 27/329 (8%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+NLT T E+PVG LGRI+N G+ +DN + R + + AP +
Sbjct: 65 RNLT----VINTNHPIEVPVGTATLGRIMNVLGDPVDNAGPIGEQERWGIHRTAPSYEEL 120
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +
Sbjct: 121 SSSTELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFTGV 180
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 181 GERTREGNDFYHEMKESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 240
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 241 FIDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 287
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 288 TGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDP 347
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 348 LVVGQEHYDCARG----VQSILQRYQELK 372
>gi|443474046|ref|ZP_21064067.1| ATP synthase beta chain [Pseudomonas pseudoalcaligenes KF707]
gi|442904981|gb|ELS29896.1| ATP synthase beta chain [Pseudomonas pseudoalcaligenes KF707]
Length = 458
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 238/356 (66%), Positives = 293/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + + ++ + +VQQQ+G+ +VR+IA G+T G+KR V TG I
Sbjct: 16 VEFPRDQVPAVYEALKVQGAETTLEVQQQLGDGVVRSIAMGSTEGLKRGLDVTSTGAAIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG+PID G I +++ IH P +++Q N +LETGIKVIDL+
Sbjct: 76 VPVGKATLGRIMDVLGNPIDEAGPIGEEERWEIHRAAPSYADQAGGNELLETGIKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY+ A V++ LQ+YKELKD
Sbjct: 316 ATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYETARGVQYVLQRYKELKD 371
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 146/336 (43%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
++ + + L +G T +PVG LGRI++ G ID + R + +
Sbjct: 52 SIAMGSTEGLKRGLDVTSTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERWEIHRA 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP D+ NE L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 112 APSYADQAGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 171
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++K N +D +V + + TG T+ E FRD
Sbjct: 172 YSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRD 231
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L+ D++ ++ A ++S LL R P V Y L E + +
Sbjct: 232 EGRDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------Q 278
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L ++ + PA++ S
Sbjct: 279 ERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDS 338
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y+ + ++ +L +Y+EL+
Sbjct: 339 TSRQLDPLVIGQEHYETARG----VQYVLQRYKELK 370
>gi|384083040|ref|ZP_09994215.1| F0F1 ATP synthase subunit beta [gamma proteobacterium HIMB30]
Length = 458
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 244/356 (68%), Positives = 292/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ + + +N++ + +VQQQ+G+ IVRTIA G+T G+ R V +T I
Sbjct: 16 VEFPRESVPQVYDALNVEGKPIVLEVQQQLGDGIVRTIAMGSTEGLSRGLDVTNTNAAIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG+PID KG+I K + PIH P FS Q + +LETGIKVIDL+
Sbjct: 76 VPVGTETLGRIMDVLGNPIDEKGDIGEKARMPIHRTAPTFSEQSASTELLETGIKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
PF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM ES
Sbjct: 136 APFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTES 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLLFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQ+YKELKD
Sbjct: 316 ATVVLSRNIAALGIYPAVDPLDSTSRQLDPLVIGQEHYDVARNVQSILQRYKELKD 371
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 146/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L++G T +PVG E LGRI++ G ID K K R + + AP ++
Sbjct: 59 EGLSRGLDVTNTNAAISVPVGTETLGRIMDVLGNPIDEKGDIGEKARMPIHRTAPTFSEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 SASTELLETGIKVIDLVAPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ N +D +V + + TG T+ EYFRD G+D L+
Sbjct: 179 GERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L N+ PA++ S SR
Sbjct: 286 TGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + +++ +L +Y+EL+
Sbjct: 346 LVIGQEHYDVAR----NVQSILQRYKELK 370
>gi|325576871|ref|ZP_08147486.1| ATP synthase F1 sector beta subunit [Haemophilus parainfluenzae
ATCC 33392]
gi|325161077|gb|EGC73195.1| ATP synthase F1 sector beta subunit [Haemophilus parainfluenzae
ATCC 33392]
Length = 457
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/356 (68%), Positives = 297/356 (83%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +TG PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGTSDGLKRGLKVENTGNPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +GEI +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEQGEIGAEENWSIHRPAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKD 370
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 145/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID + + + ++ + AP ++
Sbjct: 59 GLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEQGEIGAEENWSIHRPAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|254427887|ref|ZP_05041594.1| ATP synthase F1, beta subunit [Alcanivorax sp. DG881]
gi|196194056|gb|EDX89015.1| ATP synthase F1, beta subunit [Alcanivorax sp. DG881]
Length = 460
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 242/356 (67%), Positives = 291/356 (81%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + +++ + +VQQQ+G+ +VRTIA G+T G+KR V D G+PI
Sbjct: 16 VEFPRETVPKVYDALSVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLGVTDNGEPIQ 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G I ++ PIH P +++Q N +LETGIKVIDL+
Sbjct: 76 VPVGTKTLGRIMDVLGRPIDEAGPIGEDERMPIHRAAPTYADQAATNELLETGIKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+ LSR IA GIYPAIDPL+S S+QLDP ++G+EHY +A V+ LQ++KELKD
Sbjct: 316 STVSLSRDIASKGIYPAIDPLDSTSRQLDPLVIGQEHYDIARGVQTVLQRFKELKD 371
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 23/313 (7%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDS 250
++PVG + LGRI++ G ID R + + AP D+ + NE L TGIK ID
Sbjct: 75 QVPVGTKTLGRIMDVLGRPIDEAGPIGEDERMPIHRAAPTYADQAATNELLETGIKVIDL 134
Query: 251 MIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKY 309
+ P KG + + G GKT ++ I N + ++ +G++ + +++K
Sbjct: 135 VCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMKD 194
Query: 310 YNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQIS 369
N +D +V + + TG T+ E FRD G+D L D++ ++ A ++S
Sbjct: 195 SNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVS 254
Query: 370 LLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGD 429
LL R P + L E + +++I + G++T+ + D
Sbjct: 255 ALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPADD 301
Query: 430 VTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSG 484
+T P + D + L ++ + PAI+ S SR V G Y I +
Sbjct: 302 LTDPSPATTFAHLDSTVSLSRDIASKGIYPAIDPLDSTSRQLDPLVIGQEHYDIARG--- 358
Query: 485 DIRIMLAQYRELE 497
++ +L +++EL+
Sbjct: 359 -VQTVLQRFKELK 370
>gi|408375331|ref|ZP_11173002.1| F0F1 ATP synthase subunit beta [Alcanivorax hongdengensis A-11-3]
gi|407764777|gb|EKF73243.1| F0F1 ATP synthase subunit beta [Alcanivorax hongdengensis A-11-3]
Length = 460
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 293/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + + + +VQQQ+G+ +VRTIA G+T G+KR V D+G+PI
Sbjct: 16 VEFPRDSVPKVYDALTVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNVTDSGEPIQ 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G I K++ IH P +++Q N +LETGIKVIDL+
Sbjct: 76 VPVGTETLGRIMDVLGRPIDEAGPIGEKERMSIHREAPSYADQAATNELLETGIKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA GIYPAIDPL+S S+QLDP ++G EHY+VA V+ LQ++KELKD
Sbjct: 316 ATVVLSRDIASKGIYPAIDPLDSTSRQLDPLVIGYEHYEVARGVQTVLQRFKELKD 371
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 147/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + + ++PVG E LGRI++ G ID K R ++ + AP D+
Sbjct: 59 EGLKRGLNVTDSGEPIQVPVGTETLGRIMDVLGRPIDEAGPIGEKERMSIHREAPSYADQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ NE L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AATNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PAI+ S SR
Sbjct: 286 TGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASKGIYPAIDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y++ + ++ +L +++EL+
Sbjct: 346 LVIGYEHYEVARG----VQTVLQRFKELK 370
>gi|113461832|ref|YP_719901.1| F0F1 ATP synthase subunit beta [Haemophilus somnus 129PT]
gi|123327497|sp|Q0I5X3.1|ATPB_HAES1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|112823875|gb|ABI25964.1| ATP synthase F1 subcomplex beta subunit [Haemophilus somnus 129PT]
Length = 457
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/356 (68%), Positives = 296/356 (83%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G+++G+KR V +TG PI
Sbjct: 16 VEFPQNAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGSSDGLKRGLKVENTGNPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID KGEI +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEKGEIGAEETWAIHRAAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKD 370
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T +PVG + LGRI+N GE ID K + + + + AP ++
Sbjct: 59 GLKRGLKVENTGNPISVPVGTKTLGRIMNVLGEPIDEKGEIGAEETWAIHRAAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|398868341|ref|ZP_10623740.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM78]
gi|398233311|gb|EJN19245.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM78]
Length = 459
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V D+G I PVG TLGRI++VLG+PID G
Sbjct: 41 EVQQQLGDGVVRTIAMGSTEGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + ++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IATDERWGIHRAAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 281 RITSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G++HY A V++ LQ+YKELKD
Sbjct: 341 SRQLDPNVIGQDHYDTARGVQYVLQRYKELKD 372
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 140/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + + +PVG LGRI++ G ID R + + AP ++
Sbjct: 60 EGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIATDERWGIHRAAPSFAEQ 119
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 120 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 179
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 180 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 239
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 286
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 287 EGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 346
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 347 NVIGQDHYDTARG----VQYVLQRYKELK 371
>gi|345429156|ref|YP_004822273.1| F1 sector of membrane-bound ATP synthase subunit beta [Haemophilus
parainfluenzae T3T1]
gi|301155216|emb|CBW14681.1| F1 sector of membrane-bound ATP synthase, beta subunit [Haemophilus
parainfluenzae T3T1]
Length = 457
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/356 (68%), Positives = 297/356 (83%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +TG PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGTSDGLKRGLKVENTGNPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID KG+I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEKGDIGAEENWAIHRPAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKD 370
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID K + + + AP ++
Sbjct: 59 GLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEKGDIGAEENWAIHRPAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|112791412|gb|ABI21976.1| ATP synthase beta subunit, partial [Erwinia mallotivora]
Length = 420
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G+++G+KR + D PI PVG TLGRI+NVLG+PID KG+
Sbjct: 17 EVQQQLGGGVVRTIAMGSSDGLKRGLVATDLEHPIEVPVGTATLGRIMNVLGEPIDMKGD 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRAAPSYEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA EH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSLLQRYQELKD 348
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE ID K + R + + AP D+
Sbjct: 37 GLKRGLVATDLEHPIEVPVGTATLGRIMNVLGEPIDMKGDIGEEERWAIHRAAPSYEDQS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 217 IDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDVARG----VQSLLQRYQELK 347
>gi|398961134|ref|ZP_10678532.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM30]
gi|398989692|ref|ZP_10692925.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM24]
gi|398999420|ref|ZP_10702156.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM18]
gi|399012816|ref|ZP_10715134.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM16]
gi|398115060|gb|EJM04855.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM16]
gi|398131455|gb|EJM20771.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM18]
gi|398146918|gb|EJM35642.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM24]
gi|398153085|gb|EJM41592.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM30]
Length = 459
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V D+G I PVG TLGRI++VLG+PID G
Sbjct: 41 EVQQQLGDGVVRTIAMGSTEGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IDTEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 281 RITSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G++HY A V++ LQ+YKELKD
Sbjct: 341 SRQLDPNVIGQDHYDTARGVQYVLQRYKELKD 372
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 141/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 60 EGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIDTEERWGIHRPAPSFAEQ 119
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 120 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 179
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 180 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 239
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 286
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 287 EGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 346
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 347 NVIGQDHYDTARG----VQYVLQRYKELK 371
>gi|419844622|ref|ZP_14367910.1| ATP synthase F1, beta subunit [Haemophilus parainfluenzae HK2019]
gi|386417282|gb|EIJ31769.1| ATP synthase F1, beta subunit [Haemophilus parainfluenzae HK2019]
Length = 457
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/356 (68%), Positives = 297/356 (83%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +TG PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGTSDGLKRGLKVENTGNPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +GEI +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIVNVLGEPIDEQGEIGAEENWSIHRPAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKD 370
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 145/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRIVN GE ID + + + ++ + AP ++
Sbjct: 59 GLKRGLKVENTGNPIQVPVGTKTLGRIVNVLGEPIDEQGEIGAEENWSIHRPAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|117619208|ref|YP_858679.1| F0F1 ATP synthase subunit beta [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|411011421|ref|ZP_11387750.1| F0F1 ATP synthase subunit beta [Aeromonas aquariorum AAK1]
gi|423198950|ref|ZP_17185533.1| ATP synthase subunit beta [Aeromonas hydrophila SSU]
gi|166201687|sp|A0KQX8.1|ATPB_AERHH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|117560615|gb|ABK37563.1| ATP synthase F1, beta subunit [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|404629798|gb|EKB26526.1| ATP synthase subunit beta [Aeromonas hydrophila SSU]
Length = 462
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 242/332 (72%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQIG +VR I G+++G++R VV++GK I PVG TLGRI+NVLGDPID KG
Sbjct: 44 EVQQQIGGGVVRCITMGSSDGLRRGLEVVNSGKSIQVPVGVSTLGRIMNVLGDPIDEKGP 103
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q +N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 104 IGEEERWSIHRAAPSYEDQSNSNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 163
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 164 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMMESNVLDKVSLVYGQMNEPPGNRLRVA 223
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 224 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 283
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 284 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAALGIYPAVDPLDST 343
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY+ A V+ LQ+YKELKD
Sbjct: 344 SRQLDPLVVGKEHYETARGVQTVLQRYKELKD 375
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + K ++PVG LGRI+N G+ ID K + R ++ + AP D+
Sbjct: 64 GLRRGLEVVNSGKSIQVPVGVSTLGRIMNVLGDPIDEKGPIGEEERWSIHRAAPSYEDQS 123
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 124 NSNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 183
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 184 ERTREGNDFYHEMMESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 243
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 244 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 290
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 291 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAALGIYPAVDPLDSTSRQLDPL 350
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 351 VVGKEHYETARG----VQTVLQRYKELK 374
>gi|398853407|ref|ZP_10610010.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM80]
gi|398239938|gb|EJN25636.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM80]
Length = 459
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V D+G I PVG TLGRI++VLG+PID G
Sbjct: 41 EVQQQLGDGVVRTIAMGSTEGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IDTEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 281 RITSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G++HY A V++ LQ+YKELKD
Sbjct: 341 SRQLDPNVIGQDHYDTARGVQYVLQRYKELKD 372
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 141/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 60 EGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIDTEERWGIHRPAPSFAEQ 119
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 120 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 179
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 180 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 239
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 286
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 287 EGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 346
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 347 NVIGQDHYDTARG----VQYVLQRYKELK 371
>gi|259910316|ref|YP_002650672.1| F0F1 ATP synthase subunit beta [Erwinia pyrifoliae Ep1/96]
gi|292490160|ref|YP_003533055.1| membrane-bound ATP synthase, F1 sector subunit beta [Erwinia
amylovora CFBP1430]
gi|292901162|ref|YP_003540531.1| ATP synthase subunit beta [Erwinia amylovora ATCC 49946]
gi|387873337|ref|YP_005804726.1| membrane-bound ATP synthase, F1 sector,beta-subunit [Erwinia
pyrifoliae DSM 12163]
gi|428787150|ref|ZP_19004626.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Erwinia
amylovora ACW56400]
gi|224965938|emb|CAX57471.1| ATP synthase, F1 complex, beta subunit [Erwinia pyrifoliae Ep1/96]
gi|283480439|emb|CAY76355.1| membrane-bound ATP synthase, F1 sector,beta-subunit [Erwinia
pyrifoliae DSM 12163]
gi|291201010|emb|CBJ48149.1| ATP synthase beta subunit [Erwinia amylovora ATCC 49946]
gi|291555602|emb|CBA24220.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Erwinia
amylovora CFBP1430]
gi|312174353|emb|CBX82606.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Erwinia
amylovora ATCC BAA-2158]
gi|426274617|gb|EKV52359.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Erwinia
amylovora ACW56400]
Length = 460
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 242/358 (67%), Positives = 296/358 (82%), Gaps = 2/358 (0%)
Query: 557 IELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + + + + + +KN + + +VQQQ+G +VRTIA G+++G+KR VD P
Sbjct: 16 VEFPQDAVPQVYSALEVKNGDARLVLEVQQQLGGGVVRTIAMGSSDGLKRGLEAVDLQHP 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVID 674
I PVG TLGRI+NVLG+PID KG+I +++ IH P + +Q + ++LETGIKVID
Sbjct: 76 IEVPVGTATLGRIMNVLGEPIDMKGDIGEEERWAIHRSAPSYEDQSNSQDLLETGIKVID 135
Query: 675 LLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMK 734
L+CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM
Sbjct: 136 LMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMT 195
Query: 735 ESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEV 794
+SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEV
Sbjct: 196 DSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEV 255
Query: 795 SAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTH 854
SA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF H
Sbjct: 256 SALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315
Query: 855 LDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 373
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + E+PVG LGRI+N GE ID K + R + + AP D+
Sbjct: 62 GLKRGLEAVDLQHPIEVPVGTATLGRIMNVLGEPIDMKGDIGEEERWAIHRSAPSYEDQS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ + L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQDLLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 242 IDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSLLQRYQELK 372
>gi|34500022|gb|AAQ73593.1| ATP synthase beta subunit [Lonepinella koalarum]
Length = 426
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 246/356 (69%), Positives = 297/356 (83%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G+++G+KR V +TG PI
Sbjct: 10 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRFIALGSSDGLKRGLKVENTGHPIS 68
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID KGEI +++ IH P + +Q + +LETGIKVIDL+
Sbjct: 69 VPVGVKTLGRIMNVLGEPIDEKGEIGAEENWAIHRQAPSYEDQSNSTELLETGIKVIDLI 128
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM ES
Sbjct: 129 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTES 188
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 189 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 248
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 249 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 308
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 309 STVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGILQRYKELKD 364
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 148/338 (43%), Gaps = 25/338 (7%)
Query: 166 FVAVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVE 225
F+A+ D L +G K T +PVG + LGRI+N GE ID K + + +
Sbjct: 45 FIALGSSD--GLKRGLKVENTGHPISVPVGVKTLGRIMNVLGEPIDEKGEIGAEENWAIH 102
Query: 226 KIAPGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNK 284
+ AP D+ + E L TGIK ID + P KG + + G GKT ++ I N
Sbjct: 103 RQAPSYEDQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 162
Query: 285 NVICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYF 344
+ ++ +G++ + +++ N +D +V + + TG T+ E F
Sbjct: 163 SGYSVFAGVGERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKF 222
Query: 345 RDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFL 404
RD G+D L D++ ++ A ++S LL R P + L E +
Sbjct: 223 RDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL----- 270
Query: 405 EKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVG 464
+++I + G++T+ + D+T P + D + L N+ + PA++
Sbjct: 271 -QERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPL 329
Query: 465 LSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
S SR V G Y + + + G +L +Y+EL+
Sbjct: 330 DSTSRQLDPLVVGEEHYNVARGVQG----ILQRYKELK 363
>gi|238899337|ref|YP_002925020.1| F0F1 ATP synthase subunit beta [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229467098|gb|ACQ68872.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 460
Score = 517 bits (1332), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/358 (68%), Positives = 293/358 (81%), Gaps = 2/358 (0%)
Query: 557 IELFEINIIKYFRIINLKNNI--SINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + + K + + +KN+ + +VQQQ+G +VR IA G+++G++R V D G P
Sbjct: 16 VEFPQEAVPKVYNALEVKNDAIKLVMEVQQQLGGGVVRCIAMGSSDGLQRGLTVTDLGHP 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVID 674
I PVG TLGRI+NVLGDPID KG I +++ IH PP + + +LETGIKV+D
Sbjct: 76 IKVPVGKETLGRIMNVLGDPIDMKGPIGEQERWSIHRQPPSYEELANSQELLETGIKVMD 135
Query: 675 LLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMK 734
L+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM
Sbjct: 136 LICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMT 195
Query: 735 ESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEV 794
ES VLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEV
Sbjct: 196 ESGVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEV 255
Query: 795 SAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTH 854
SA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF H
Sbjct: 256 SALLGRMPSAVGYQPTLAEEMGVLQERITSTKKGSITSVQAVYVPADDLTDPSPATTFAH 315
Query: 855 LDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LD+T VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 316 LDATAVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKD 373
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 137/313 (43%), Gaps = 23/313 (7%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDS 250
++PVG E LGRI+N G+ ID K + R ++ + P + + E L TGIK +D
Sbjct: 77 KVPVGKETLGRIMNVLGDPIDMKGPIGEQERWSIHRQPPSYEELANSQELLETGIKVMDL 136
Query: 251 MIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKY 309
+ P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 137 ICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTE 196
Query: 310 YNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQIS 369
+D +V + + TG T+ E FRD G+D L+ D++ ++ A ++S
Sbjct: 197 SGVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVS 256
Query: 370 LLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGD 429
LL R P V Y L E + +++I + G++T+ + D
Sbjct: 257 ALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKKGSITSVQAVYVPADD 303
Query: 430 VTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSG 484
+T P + D L + + PA++ S SR V G Y + +
Sbjct: 304 LTDPSPATTFAHLDATAVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVAR---- 359
Query: 485 DIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 360 GVQSILQRYQELK 372
>gi|146329438|ref|YP_001210026.1| F0F1 ATP synthase subunit beta [Dichelobacter nodosus VCS1703A]
gi|166201700|sp|A5EXL4.1|ATPB_DICNV RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|146232908|gb|ABQ13886.1| ATP synthase F1, beta subunit [Dichelobacter nodosus VCS1703A]
Length = 463
Score = 517 bits (1332), Expect = e-143, Method: Compositional matrix adjust.
Identities = 238/343 (69%), Positives = 291/343 (84%), Gaps = 1/343 (0%)
Query: 570 IINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILN 629
+++ + N++ +VQQ +G+ +VRTIA G+++G++R ++ +TG I PVG TLGRI+N
Sbjct: 30 LVSQEANVTF-EVQQLLGDGVVRTIAMGSSDGLRRGMVIENTGDAIKVPVGKATLGRIMN 88
Query: 630 VLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFG 689
VLG+P+D+ G IN++ K IH P + + +LETGIKVIDLLCPF KGGK+GLFG
Sbjct: 89 VLGEPVDHGGAINAEDKWSIHRAAPAYDELSNSTELLETGIKVIDLLCPFAKGGKVGLFG 148
Query: 690 GAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQM 749
GAGVGKTVNMMELIRNIA+EH G SVF GVGER+REGNDFY+EMKES+VLDKVSL+YGQM
Sbjct: 149 GAGVGKTVNMMELIRNIAVEHSGYSVFAGVGERTREGNDFYYEMKESDVLDKVSLVYGQM 208
Query: 750 NEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQP 809
NEP+GNR RVALTGL++AE FR G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQP
Sbjct: 209 NEPAGNRFRVALTGLTMAEYFREEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQP 268
Query: 810 TLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELG 869
TLAEEMGKLQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSRQIAELG
Sbjct: 269 TLAEEMGKLQERIASTKKGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIAELG 328
Query: 870 IYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IYPA+DPL+S S+QLDP +VGEEHY A V+ LQ+YKEL+D
Sbjct: 329 IYPAVDPLDSTSRQLDPLVVGEEHYSTARRVQGVLQRYKELRD 371
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 158/360 (43%), Gaps = 24/360 (6%)
Query: 144 NNTVLSGQINGTTGYEEAAAQGFV-AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRI 202
N+ ++S + N T ++ G V + + L +G T ++PVG LGRI
Sbjct: 27 NDALVSQEANVTFEVQQLLGDGVVRTIAMGSSDGLRRGMVIENTGDAIKVPVGKATLGRI 86
Query: 203 VNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELI 262
+N GE +D+ +++ ++ + AP + + E L TGIK ID + P KG + +
Sbjct: 87 MNVLGEPVDHGGAINAEDKWSIHRAAPAYDELSNSTELLETGIKVIDLLCPFAKGGKVGL 146
Query: 263 IGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAA 321
G GKT ++ I N + ++ +G++ + ++K + +D +V
Sbjct: 147 FGGAGVGKTVNMMELIRNIAVEHSGYSVFAGVGERTREGNDFYYEMKESDVLDKVSLVYG 206
Query: 322 TAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAF 381
+ A ++ TG T+ EYFR+ G+D L D++ ++ A ++S LL R P +
Sbjct: 207 QMNEPAGNRFRVALTGLTMAEYFREEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGY 266
Query: 382 PGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISI 441
L E K+ +++I + G++T+ + D+T P +
Sbjct: 267 -------QPTLAEEMGKL------QERIASTKKGSITSIQAVYVPADDLTDPSPATTFAH 313
Query: 442 TDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
D + L + PA++ S SR V G Y +++ G +L +Y+EL
Sbjct: 314 LDSTVVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGEEHYSTARRVQG----VLQRYKEL 369
>gi|152978010|ref|YP_001343639.1| F0F1 ATP synthase subunit beta [Actinobacillus succinogenes 130Z]
gi|171472936|sp|A6VL57.1|ATPB_ACTSZ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|150839733|gb|ABR73704.1| ATP synthase F1, beta subunit [Actinobacillus succinogenes 130Z]
Length = 458
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 243/332 (73%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G ++G+KR V +TG PI PVG TLGRI+NVLG+PID KGE
Sbjct: 40 EVQQQLGGGVVRCIALGTSDGLKRGLAVKNTGNPISVPVGTKTLGRIMNVLGEPIDQKGE 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGAEETWAIHREAPSYEDQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 340 SRQLDPQVVGQEHYDVARGVQGILQRYKELKD 371
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 148/346 (42%), Gaps = 29/346 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG + LGRI+N GE ID K + + + + AP D+
Sbjct: 60 GLKRGLAVKNTGNPISVPVGTKTLGRIMNVLGEPIDQKGEIGAEETWAIHREAPSYEDQS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 120 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 180 ERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPQ 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE------SFSKFSSDLDIV 509
V G Y + + + G +L +Y+EL+ S + S D +V
Sbjct: 347 VVGQEHYDVARGVQG----ILQRYKELKDIIAILSMDELSEDDKLV 388
>gi|304313401|ref|YP_003812999.1| F1-ATP synthase subunit beta [gamma proteobacterium HdN1]
gi|301799134|emb|CBL47377.1| F1-ATP synthase, beta subunit [gamma proteobacterium HdN1]
Length = 459
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 297/356 (83%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + +N+ + ++ +VQQQ+G+ +VRTIA G+T G++R V +T K I
Sbjct: 16 VEFPRDSVPKVYDALNVDSVSTVLEVQQQLGDGVVRTIAMGSTEGLRRGLNVQNTNKAIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG+ ID G I ++++ IH P F+ Q +N +LETGIKVIDL+
Sbjct: 76 VPVGKETLGRIMDVLGNAIDEAGPIGEQERASIHRKSPTFAEQAASNELLETGIKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF+HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFSHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA GIYPAIDPL+S S+QLDP ++G+EHY VA V+ LQ+YKELKD
Sbjct: 316 ATVVLSRDIAAKGIYPAIDPLDSTSRQLDPLVIGDEHYTVARGVQTVLQRYKELKD 371
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 145/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T K +PVG E LGRI++ G ID + R ++ + +P ++
Sbjct: 59 EGLRRGLNVQNTNKAISVPVGKETLGRIMDVLGNAIDEAGPIGEQERASIHRKSPTFAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ NE L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AASNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FIDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P S D + L ++ PAI+ S SR
Sbjct: 286 TGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRDIAAKGIYPAIDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 346 LVIGDEHYTVARG----VQTVLQRYKELK 370
>gi|398920342|ref|ZP_10659259.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM49]
gi|398168351|gb|EJM56372.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM49]
Length = 459
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 285/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V D+G I PVG TLGRI++VLG+PID G
Sbjct: 41 EVQQQLGDGVVRTIAMGSTEGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGP 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 281 RITSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G++HY A V++ LQ+YKELKD
Sbjct: 341 SRQLDPNVIGQDHYDTARGVQYVLQRYKELKD 372
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 158/387 (40%), Gaps = 30/387 (7%)
Query: 117 IIRFAYNIEYDYFDPRCLNQTLNIKFANNTVLSGQINGTTGYEEAAAQGFVAVLIDDLKN 176
II ++E+ + L ++ A T L Q G A G +
Sbjct: 9 IIGAVIDVEFPRDSVPSIYNALTVQSAAGTTLEVQQQLGDGVVRTIAMG-------STEG 61
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G + + +PVG LGRI++ G ID + R + + AP ++
Sbjct: 62 LKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIATEERWGIHRPAPSFAEQAG 121
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +G+
Sbjct: 122 GNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGE 181
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 182 RTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFV 241
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + L E + +++I + G
Sbjct: 242 DNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKEG 288
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L ++ + PA++ S SR V
Sbjct: 289 SITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNV 348
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y + ++ +L +Y+EL+
Sbjct: 349 IGQDHYDTARG----VQYVLQRYKELK 371
>gi|188535583|ref|YP_001909380.1| F0F1 ATP synthase subunit beta [Erwinia tasmaniensis Et1/99]
gi|226740200|sp|B2VCA4.1|ATPB_ERWT9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|188030625|emb|CAO98521.1| ATP synthase, F1 complex, beta subunit [Erwinia tasmaniensis
Et1/99]
Length = 460
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/358 (67%), Positives = 296/358 (82%), Gaps = 2/358 (0%)
Query: 557 IELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + + + + + +KN + + +VQQQ+G +VRTIA G+++G+KR VD P
Sbjct: 16 VEFPQDAVPQVYSALEVKNGDARLVLEVQQQLGGGVVRTIAMGSSDGLKRGLETVDLQHP 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVID 674
I PVG TLGRI+NVLG+PID KG+I +++ IH P + +Q + ++LETGIKVID
Sbjct: 76 IEVPVGTATLGRIMNVLGEPIDMKGDIGEEERWAIHRSAPSYEDQSNSQDLLETGIKVID 135
Query: 675 LLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMK 734
L+CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM
Sbjct: 136 LMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMT 195
Query: 735 ESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEV 794
+SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEV
Sbjct: 196 DSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEV 255
Query: 795 SAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTH 854
SA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF H
Sbjct: 256 SALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315
Query: 855 LDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 373
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + E+PVG LGRI+N GE ID K + R + + AP D+
Sbjct: 62 GLKRGLETVDLQHPIEVPVGTATLGRIMNVLGEPIDMKGDIGEEERWAIHRSAPSYEDQS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ + L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQDLLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSLLQRYQELK 372
>gi|170718139|ref|YP_001785168.1| F0F1 ATP synthase subunit beta [Haemophilus somnus 2336]
gi|226740206|sp|B0UWG5.1|ATPB_HAES2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|168826268|gb|ACA31639.1| ATP synthase F1, beta subunit [Haemophilus somnus 2336]
Length = 457
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/356 (68%), Positives = 296/356 (83%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G+++G+KR V +TG PI
Sbjct: 16 VEFPQNAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGSSDGLKRGLKVENTGNPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID KGEI +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEKGEIGAEEYWAIHRAAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKD 370
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T +PVG + LGRI+N GE ID K + + + + AP ++
Sbjct: 59 GLKRGLKVENTGNPISVPVGTKTLGRIMNVLGEPIDEKGEIGAEEYWAIHRAAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|225572597|gb|ACN93884.1| AtpD [Gallibacterium anatis]
Length = 452
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/356 (68%), Positives = 293/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + +N++ + + +VQQQ+G +VR IA G+++G+KR V +TG PI
Sbjct: 16 VEFPQDAVPKVYEALNVETGLVL-EVQQQLGGGVVRCIAMGSSDGLKRGLSVTNTGSPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I K + IH P + Q + +LET IKVIDL+
Sbjct: 75 VPVGTETLGRIMNVLGEPIDERGPIGEKARWSIHRAAPSYEEQANSTELLETDIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM+ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMQES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDP P+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPPPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKD 370
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG E LGRI+N GE ID + K R ++ + AP ++
Sbjct: 59 GLKRGLSVTNTGSPISVPVGTETLGRIMNVLGEPIDERGPIGEKARWSIHRAAPSYEEQA 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L T IK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETDIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMQESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPPPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPQ 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|34500016|gb|AAQ73590.1| ATP synthase beta subunit [Bisgaard Taxon 5]
Length = 426
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/356 (68%), Positives = 295/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + +N++ + + +VQQQ+G +VR IA G+++G+KR V +TGKPI
Sbjct: 16 VEFPQDAVPKVYDALNVETGLVL-EVQQQLGGGVVRCIAMGSSDGLKRGLTVTNTGKPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I +++ IH P + +Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDERGPIGAEENWSIHRAAPSYEDQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVG R+REGNDFYHEM ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGXRTREGNDFYHEMTES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DN YR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNNYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKD 370
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG + LGRI+N GE ID + + ++ + AP D+
Sbjct: 59 GLKRGLTVTNTGKPISVPVGTKTLGRIMNVLGEPIDERGPIGAEENWSIHRAAPSYEDQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
+ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 XRTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D+ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 239 VDNNYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|34500014|gb|AAQ73589.1| ATP synthase beta subunit [Bisgaard Taxon 17]
Length = 444
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/356 (68%), Positives = 296/356 (83%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +TG PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGTSDGLKRGLKVENTGNPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +GEI +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDERGEIGAEENWSIHRAAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR SAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTFTHLD
Sbjct: 255 LLGRMRSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFTHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKD 370
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 146/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID + + + ++ + AP ++
Sbjct: 59 GLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDERGEIGAEENWSIHRAAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R + S + + + + + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGR-------------MRSAVGYQPTLAEEMGVLQERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFTHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|294638351|ref|ZP_06716604.1| ATP synthase F1, beta subunit [Edwardsiella tarda ATCC 23685]
gi|451966308|ref|ZP_21919562.1| ATP synthase subunit beta [Edwardsiella tarda NBRC 105688]
gi|291088604|gb|EFE21165.1| ATP synthase F1, beta subunit [Edwardsiella tarda ATCC 23685]
gi|451315087|dbj|GAC64924.1| ATP synthase subunit beta [Edwardsiella tarda NBRC 105688]
Length = 460
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/358 (67%), Positives = 294/358 (82%), Gaps = 2/358 (0%)
Query: 557 IELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + + K + + +K + + +VQQQ+G +VR IA G+++G++R +V D P
Sbjct: 16 VEFPQDAVPKVYNALEVKGGATKLVLEVQQQLGGGVVRCIAMGSSDGLRRGLVVEDQDHP 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVID 674
I PVG TLGRI+NVLGDP+D KGEI +++ IH P + + + +LETGIKVID
Sbjct: 76 IEVPVGKATLGRIMNVLGDPVDMKGEIGEEERWAIHRAAPSYEDLSNSQELLETGIKVID 135
Query: 675 LLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMK 734
L+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM
Sbjct: 136 LICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMT 195
Query: 735 ESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEV 794
+SNVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEV
Sbjct: 196 DSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEV 255
Query: 795 SAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTH 854
SA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF H
Sbjct: 256 SALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315
Query: 855 LDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 137/314 (43%), Gaps = 23/314 (7%)
Query: 190 FEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSID 249
E+PVG LGRI+N G+ +D K + + R + + AP D + E L TGIK ID
Sbjct: 76 IEVPVGKATLGRIMNVLGDPVDMKGEIGEEERWAIHRAAPSYEDLSNSQELLETGIKVID 135
Query: 250 SMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLK 308
+ P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 136 LICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMT 195
Query: 309 YYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQI 368
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++
Sbjct: 196 DSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEV 255
Query: 369 SLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEG 428
S LL R P + L E + +++I + G++T+ +
Sbjct: 256 SALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPAD 302
Query: 429 DVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLS 483
D+T P + D + L + + PA++ S SR V G Y +
Sbjct: 303 DLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARG-- 360
Query: 484 GDIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 361 --VQSILQRYQELK 372
>gi|397168866|ref|ZP_10492302.1| F0F1 ATP synthase subunit beta [Alishewanella aestuarii B11]
gi|396089453|gb|EJI87027.1| F0F1 ATP synthase subunit beta [Alishewanella aestuarii B11]
Length = 461
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G VR IA G T+G++R T+V ++GK I PVG TLGRI++VLG+PID G
Sbjct: 43 EVQQQLGGGTVRAIAMGTTDGLRRGTLVGNSGKAIQVPVGKATLGRIMDVLGNPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q +N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERWSIHRAAPSYEDQAASNALLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF+HLD+T+VLSR IA LGIYPAIDPL+S
Sbjct: 283 RITSTKTGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRNIASLGIYPAIDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY+VA V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGKEHYEVARGVQTVLQRYKELKD 374
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 157/367 (42%), Gaps = 25/367 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L +G + K ++PVG LGRI++ G ID + R ++ +
Sbjct: 55 AIAMGTTDGLRRGTLVGNSGKAIQVPVGKATLGRIMDVLGNPIDEAGPIGEEERWSIHRA 114
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP D+ + N L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 115 APSYEDQAASNALLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 174
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++K N +D +V + + TG T+ E FRD
Sbjct: 175 YSVFAGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRD 234
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L D++ ++ A ++S LL R P + L E + +
Sbjct: 235 EGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------Q 281
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P S D + L N+ + PAI+ S
Sbjct: 282 ERITSTKTGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRNIASLGIYPAIDPLDS 341
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEK 519
SR V G Y++ + ++ +L +Y+EL+ +L +T +Y K
Sbjct: 342 TSRQLDPLVIGKEHYEVARG----VQTVLQRYKELKDIIAILGMDELSDEDRTTVYRARK 397
Query: 520 ISLLMKQ 526
I + Q
Sbjct: 398 IQRFLSQ 404
>gi|315635259|ref|ZP_07890536.1| ATP synthase F1 sector beta subunit [Aggregatibacter segnis ATCC
33393]
gi|315476005|gb|EFU66760.1| ATP synthase F1 sector beta subunit [Aggregatibacter segnis ATCC
33393]
Length = 457
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/356 (68%), Positives = 295/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + +N++ +++ +VQQQ+G +VR IA G ++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALNVETGLTL-EVQQQLGGGVVRCIALGASDGLKRGLKVENTNDPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLGDPID +G I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGDPIDEQGPIGEEERWSIHRSAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKD 370
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 145/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N G+ ID + + R ++ + AP ++
Sbjct: 59 GLKRGLKVENTNDPIQVPVGTKTLGRIMNVLGDPIDEQGPIGEEERWSIHRSAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|112791410|gb|ABI21975.1| ATP synthase beta subunit, partial [Erwinia psidii]
Length = 421
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/347 (69%), Positives = 292/347 (84%), Gaps = 2/347 (0%)
Query: 568 FRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLG 625
+ + +KN + + +VQQQ+G +VRTIA G+++G+KR VD PI PVG TLG
Sbjct: 2 YSALEVKNGDARLVLEVQQQLGGGVVRTIAMGSSDGLKRGLETVDLEHPIEVPVGTATLG 61
Query: 626 RILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKI 685
RI+NVLG+PID KG+I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+
Sbjct: 62 RIMNVLGEPIDMKGDIGEEERWAIHRSAPSYEDQSNSQELLETGIKVIDLMCPFAKGGKV 121
Query: 686 GLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLI 745
GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181
Query: 746 YGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAV 805
YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAV
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAV 241
Query: 806 GYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQI 865
GYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQI
Sbjct: 242 GYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 301
Query: 866 AELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
A LGIYPA+DPL+S S+QLDP +VG+EHY+VA V+ LQ+Y+ELKD
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYEVARGVQSLLQRYQELKD 348
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 145/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + E E+PVG LGRI+N GE ID K + R + + AP D+
Sbjct: 37 GLKRGLETVDLEHPIEVPVGTATLGRIMNVLGEPIDMKGDIGEEERWAIHRSAPSYEDQS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 217 IDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y++ + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYEVARG----VQSLLQRYQELK 347
>gi|300721114|ref|YP_003710382.1| membrane-bound ATP synthase, F1 sector subunit beta [Xenorhabdus
nematophila ATCC 19061]
gi|297627599|emb|CBJ88118.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Xenorhabdus
nematophila ATCC 19061]
Length = 460
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/361 (67%), Positives = 296/361 (81%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + ++ K + + +KN + +VQQQ+G IVR IA G ++G++R+ V D
Sbjct: 13 VVDVEFPQDSVPKVYDALEVKNGEEKLVLEVQQQLGGGIVRCIAMGTSDGLRRHLEVTDL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
G PI PVG TLGRI+NVLGDPID KGEI +++ IH P + + +LETGIK
Sbjct: 73 GHPIEVPVGKATLGRIMNVLGDPIDMKGEIGEEERWSIHRTAPTYEELSNSQELLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
V+DL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM +SNVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAG
Sbjct: 193 EMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+ST+ G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTQTGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 140/313 (44%), Gaps = 23/313 (7%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDS 250
E+PVG LGRI+N G+ ID K + + R ++ + AP + + E L TGIK +D
Sbjct: 77 EVPVGKATLGRIMNVLGDPIDMKGEIGEEERWSIHRTAPTYEELSNSQELLETGIKVMDL 136
Query: 251 MIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKY 309
+ P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 137 ICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTD 196
Query: 310 YNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQIS 369
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++S
Sbjct: 197 SNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVS 256
Query: 370 LLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGD 429
LL R P + + + + + +++I + G++T+ + D
Sbjct: 257 ALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTQTGSITSVQAVYVPADD 303
Query: 430 VTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSG 484
+T P + D + L + + PA++ S SR V G Y + +
Sbjct: 304 LTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARG--- 360
Query: 485 DIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 361 -VQSILQRYQELK 372
>gi|336450461|ref|ZP_08620912.1| ATP synthase, F1 beta subunit [Idiomarina sp. A28L]
gi|336282856|gb|EGN76077.1| ATP synthase, F1 beta subunit [Idiomarina sp. A28L]
Length = 461
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G T+G++R V +TG+ I+ PVG TLGRI+NVLG+PID G+
Sbjct: 43 EVQQQLGGGVVRTIALGTTDGLRRGLSVENTGESIMVPVGKATLGRIMNVLGEPIDEAGD 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERMSIHREAPSYEDQSSSVELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL+IAE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTIAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RITSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPQVIGHEHYDTARGVQSVLQRYKELKD 374
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T + +PVG LGRI+N GE ID + R ++ + AP D+
Sbjct: 63 GLRRGLSVENTGESIMVPVGKATLGRIMNVLGEPIDEAGDIGEEERMSIHREAPSYEDQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 123 SSVELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG TI E FRD G+D L
Sbjct: 183 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLFF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I + N
Sbjct: 243 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKN 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPQ 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 350 VIGHEHYDTARG----VQSVLQRYKELK 373
>gi|118603005|ref|YP_904220.1| F0F1 ATP synthase subunit beta [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|166222411|sp|A1AXU2.1|ATPB_RUTMC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|118567944|gb|ABL02749.1| ATP synthase F1 subcomplex beta subunit [Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica)]
Length = 459
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/332 (73%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G + G+KR V +TG PI PVG TLGRI+NVLG+PIDN G+
Sbjct: 40 EVQQQLGDYVVRTIAMGGSEGLKRGLKVTNTGGPIKVPVGVKTLGRIMNVLGEPIDNAGD 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + IH P + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGQEVSWAIHRSAPAYHELAPAAELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMKESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFSGVGERTREGNDFYHEMKESNVLDKVSLVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLA EMG LQE
Sbjct: 220 LTGLTMAEYFRDEGHDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSRQ+AELGIYPA+DPL+S
Sbjct: 280 RITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQVAELGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP IVGEEHY VA V+ LQ+YKELKD
Sbjct: 340 SRQLDPLIVGEEHYNVARGVQSVLQRYKELKD 371
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 140/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G K T ++PVG + LGRI+N GE IDN + + + AP +
Sbjct: 59 EGLKRGLKVTNTGGPIKVPVGVKTLGRIMNVLGEPIDNAGDIGQEVSWAIHRSAPAYHEL 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
E L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 APAAELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFSGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ EYFRD G D L+
Sbjct: 179 GERTREGNDFYHEMKESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGHDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + + L ER I +
Sbjct: 239 FIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQER-------------ITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 286 KGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQVAELGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + ++ +L +Y+EL+
Sbjct: 346 LIVGEEHYNVARG----VQSVLQRYKELK 370
>gi|300719162|ref|YP_003743965.1| ATP synthase F1 complex subunit beta [Erwinia billingiae Eb661]
gi|299064998|emb|CAX62118.1| ATP synthase, F1 complex, beta subunit [Erwinia billingiae Eb661]
Length = 460
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/358 (67%), Positives = 295/358 (82%), Gaps = 2/358 (0%)
Query: 557 IELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + + + + + +KN + + +VQQQ+G +VRTIA G+++G+KR VD P
Sbjct: 16 VEFPQDAVPQVYSALEVKNGDARLVLEVQQQLGGGVVRTIAMGSSDGLKRGLETVDLEHP 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVID 674
I PVG TLGRI+NVLG+PID KG+I +++ IH P + +Q + +LETGIKVID
Sbjct: 76 IEVPVGVATLGRIMNVLGEPIDMKGDIGEEERWAIHRAAPSYEDQSNSQELLETGIKVID 135
Query: 675 LLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMK 734
L+CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM
Sbjct: 136 LMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMT 195
Query: 735 ESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEV 794
+SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEV
Sbjct: 196 DSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEV 255
Query: 795 SAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTH 854
SA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF H
Sbjct: 256 SALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315
Query: 855 LDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 373
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + E E+PVG LGRI+N GE ID K + R + + AP D+
Sbjct: 62 GLKRGLETVDLEHPIEVPVGVATLGRIMNVLGEPIDMKGDIGEEERWAIHRAAPSYEDQS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 242 IDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSLLQRYQELK 372
>gi|358449481|ref|ZP_09159965.1| F0F1 ATP synthase subunit beta [Marinobacter manganoxydans MnI7-9]
gi|385333420|ref|YP_005887371.1| ATP synthase subunit beta [Marinobacter adhaerens HP15]
gi|311696570|gb|ADP99443.1| ATP synthase subunit beta [Marinobacter adhaerens HP15]
gi|357226236|gb|EHJ04717.1| F0F1 ATP synthase subunit beta [Marinobacter manganoxydans MnI7-9]
Length = 464
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/356 (67%), Positives = 297/356 (83%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + L+ + +VQQQ+G+ IVRTIA G+T G+KR +TG PI
Sbjct: 16 VEFPRDSVPKVYDALLLEGGETTLEVQQQLGDGIVRTIAMGSTEGLKRGLKAENTGNPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID GEI +++ IH P +++Q + ++LETGIKVIDL+
Sbjct: 76 VPVGTQTLGRIMDVLGRPIDEAGEIGEEERWAIHRKAPGYADQAASADLLETGIKVIDLI 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFY+EMKES
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAGVGERTREGNDFYYEMKES 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+++YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG+LQERI+STKNG+ITS+QA+YVPADDLTDPSP+TTF+HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGQLQERITSTKNGSITSIQAVYVPADDLTDPSPATTFSHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA GIYPAIDPL+S S+QLDP I+G+EHY+VA V+ LQ+YKELKD
Sbjct: 316 ATVVLSRDIASKGIYPAIDPLDSTSRQLDPLIIGQEHYEVARGVQTNLQRYKELKD 371
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 150/329 (45%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G K T +PVG + LGRI++ G ID + + R + + APG D+
Sbjct: 59 EGLKRGLKAENTGNPISVPVGTQTLGRIMDVLGRPIDEAGEIGEEERWAIHRKAPGYADQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ + L TGIK ID + P KG + + G GKT ++ I N K + + ++ +
Sbjct: 119 AASADLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + ++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 GERTREGNDFYYEMKESNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E ++ +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGQL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
NG++T+ + D+T P S D + L ++ + PAI+ S SR
Sbjct: 286 NGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRDIASKGIYPAIDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y++ + ++ L +Y+EL+
Sbjct: 346 LIIGQEHYEVAR----GVQTNLQRYKELK 370
>gi|392552779|ref|ZP_10299916.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas spongiae
UST010723-006]
Length = 461
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/332 (72%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G T+G++R T V TG+PI PVG TLGRI+NVLGDPID G
Sbjct: 43 EVQQQLGGGVVRGIALGTTDGLRRGTEVDTTGEPIKVPVGTATLGRIMNVLGDPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERYSIHREAPSYEDQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPAIDPL+S
Sbjct: 283 RIASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAIDPLDSS 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY VA V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGQEHYDVARGVQTVLQRYKELKD 374
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 156/359 (43%), Gaps = 25/359 (6%)
Query: 147 VLSGQINGTTGYEEAAAQGFV--AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVN 204
V SG++ G T + G V + + L +G + T + ++PVG LGRI+N
Sbjct: 32 VTSGELAGLTLEVQQQLGGGVVRGIALGTTDGLRRGTEVDTTGEPIKVPVGTATLGRIMN 91
Query: 205 SKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIG 264
G+ ID + R ++ + AP D+ S E L TGIK ID + P KG + + G
Sbjct: 92 VLGDPIDEAGPIGEEERYSIHREAPSYEDQSSSVELLETGIKVIDLVCPFAKGGKVGLFG 151
Query: 265 DRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATA 323
GKT ++ I N + ++ +G++ + +++ N +D +V
Sbjct: 152 GAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNESNVLDKVSLVYGQM 211
Query: 324 ADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPG 383
+ + TG T+ E FRD G+D L D++ ++ A ++S LL R P +
Sbjct: 212 NEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGY-- 269
Query: 384 DVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITD 443
L E + +++I + G++T+ + D+T P + D
Sbjct: 270 -----QPTLAEEMGVL------QERIASTKTGSITSIQAVYVPADDLTDPSPATTFAHLD 318
Query: 444 GQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ L ++ + PAI+ S SR V G Y + + ++ +L +Y+EL+
Sbjct: 319 ATVVLSRDIASLGIYPAIDPLDSSSRQLDPLVIGQEHYDVARG----VQTVLQRYKELK 373
>gi|112791408|gb|ABI21974.1| ATP synthase beta subunit, partial [Erwinia tracheiphila]
Length = 421
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/347 (69%), Positives = 291/347 (83%), Gaps = 2/347 (0%)
Query: 568 FRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLG 625
+ + +KN + + +VQQQ+G +VRTIA G+++G+KR VD PI PVG TLG
Sbjct: 2 YSALEVKNGDARLVLEVQQQLGGGVVRTIAMGSSDGLKRGLETVDLEHPIEVPVGTATLG 61
Query: 626 RILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKI 685
RI+NVLG+PID KG+I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+
Sbjct: 62 RIMNVLGEPIDMKGDIGEEERWAIHRSAPSYEDQSNSQELLETGIKVIDLMCPFAKGGKV 121
Query: 686 GLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLI 745
GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181
Query: 746 YGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAV 805
YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAV
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAV 241
Query: 806 GYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQI 865
GYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQI
Sbjct: 242 GYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 301
Query: 866 AELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
A LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQELKD 348
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + E E+PVG LGRI+N GE ID K + R + + AP D+
Sbjct: 37 GLKRGLETVDLEHPIEVPVGTATLGRIMNVLGEPIDMKGDIGEEERWAIHRSAPSYEDQS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 217 IDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDVARG----VQSLLQRYQELK 347
>gi|34500008|gb|AAQ73586.1| ATP synthase beta subunit [Actinobacillus succinogenes]
Length = 439
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 243/332 (73%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G ++G+KR V +TG PI PVG TLGRI+NVLG+PID KGE
Sbjct: 34 EVQQQLGGGVVRCIALGTSDGLKRGLAVKNTGNPISVPVGTKTLGRIMNVLGEPIDQKGE 93
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 94 IGAEETWAIHREAPSYEDQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 153
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 154 ELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVA 213
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 214 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 273
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 274 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDST 333
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 334 SRQLDPQVVGQEHYDVARGVQGILQRYKELKD 365
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 148/346 (42%), Gaps = 29/346 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG + LGRI+N GE ID K + + + + AP D+
Sbjct: 54 GLKRGLAVKNTGNPISVPVGTKTLGRIMNVLGEPIDQKGEIGAEETWAIHREAPSYEDQS 113
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 114 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVG 173
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 174 ERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 233
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 234 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 280
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 281 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPQ 340
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE------SFSKFSSDLDIV 509
V G Y + + + G +L +Y+EL+ S + S D +V
Sbjct: 341 VVGQEHYDVARGVQG----ILQRYKELKDIIAILSMDELSEDDKLV 382
>gi|345864683|ref|ZP_08816881.1| ATP synthase subunit beta [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345876704|ref|ZP_08828469.1| ATP synthase subunit gamma [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|344226304|gb|EGV52642.1| ATP synthase subunit gamma [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|345124216|gb|EGW54098.1| ATP synthase subunit beta [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 458
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T+G+KRN V TG PI PVG TLGRI++VLG+P+D GE
Sbjct: 40 EVQQQLGDGVVRTIAMGSTDGLKRNVEVESTGAPITVPVGQGTLGRIMDVLGNPVDEAGE 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ + PIH LPPKF +Q ILETGIKVIDL+ P KGGK+GLFGGAGVGKTV +M
Sbjct: 100 VKCDSRMPIHRLPPKFEDQASTTEILETGIKVIDLIMPISKGGKVGLFGGAGVGKTVTLM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA+EH G SVF GVGER+REGNDFYHEM E VLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAVEHSGFSVFAGVGERTREGNDFYHEMHEGGVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL+IAE FR+ G+DVL+F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTIAENFRDEGRDVLMFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS QA+YVPADDLTDPSP+TTF HLD+T+VLSRQ+AELGIYPA+DPL+S
Sbjct: 280 RITSTKTGSITSFQAVYVPADDLTDPSPATTFAHLDATLVLSRQVAELGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+ LDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 340 SRILDPNVIGQEHYDTARAVQGTLQRYKELKD 371
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 136/312 (43%), Gaps = 23/312 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G +D + +R + ++ P D+ S E L TGIK ID +
Sbjct: 76 VPVGQGTLGRIMDVLGNPVDEAGEVKCDSRMPIHRLPPKFEDQASTTEILETGIKVIDLI 135
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
+PI KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 136 MPISKGGKVGLFGGAGVGKTVTLMELIRNIAVEHSGFSVFAGVGERTREGNDFYHEMHEG 195
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
+D +V + + TG TI E FRD G+D L+ D++ ++ A ++S
Sbjct: 196 GVLDKVALVYGQMNEPPGNRLRVALTGLTIAENFRDEGRDVLMFVDNIYRYTLAGTEVSA 255
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P V Y L E + +++I + G++T+F + D+
Sbjct: 256 LLGR------MPSAVGY-QPTLAEEMGTL------QERITSTKTGSITSFQAVYVPADDL 302
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P + D + L + PA++ S SR V G Y + + G
Sbjct: 303 TDPSPATTFAHLDATLVLSRQVAELGIYPAVDPLDSTSRILDPNVIGQEHYDTARAVQG- 361
Query: 486 IRIMLAQYRELE 497
L +Y+EL+
Sbjct: 362 ---TLQRYKELK 370
>gi|385786624|ref|YP_005817733.1| F0F1 ATP synthase subunit beta [Erwinia sp. Ejp617]
gi|310765896|gb|ADP10846.1| F0F1 ATP synthase subunit beta [Erwinia sp. Ejp617]
Length = 435
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/347 (69%), Positives = 291/347 (83%), Gaps = 2/347 (0%)
Query: 568 FRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLG 625
+ + +KN + + +VQQQ+G +VRTIA G+++G+KR VD PI PVG TLG
Sbjct: 2 YSALEVKNGDARLVLEVQQQLGGGVVRTIAMGSSDGLKRGLEAVDLQHPIEVPVGTATLG 61
Query: 626 RILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKI 685
RI+NVLG+PID KG+I +++ IH P + +Q + ++LETGIKVIDL+CPF KGGK+
Sbjct: 62 RIMNVLGEPIDMKGDIGEEERWAIHRSAPSYEDQSNSQDLLETGIKVIDLMCPFAKGGKV 121
Query: 686 GLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLI 745
GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181
Query: 746 YGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAV 805
YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAV
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAV 241
Query: 806 GYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQI 865
GYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQI
Sbjct: 242 GYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 301
Query: 866 AELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
A LGIYPA+DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 348
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + E+PVG LGRI+N GE ID K + R + + AP D+
Sbjct: 37 GLKRGLEAVDLQHPIEVPVGTATLGRIMNVLGEPIDMKGDIGEEERWAIHRSAPSYEDQS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ + L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NSQDLLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 217 IDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDTARG----VQSLLQRYQELK 347
>gi|377577824|ref|ZP_09806805.1| ATP synthase subunit beta [Escherichia hermannii NBRC 105704]
gi|377541062|dbj|GAB51970.1| ATP synthase subunit beta [Escherichia hermannii NBRC 105704]
Length = 460
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R VVD PI PVG TLGRI+NVLG PID KG+
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLTVVDLEHPIEVPVGKATLGRIMNVLGQPIDMKGD 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 62 GLRRGLTVVDLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|15616638|ref|NP_239850.1| ATP synthase F0F1 subunit beta [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681397|ref|YP_002467782.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219681953|ref|YP_002468337.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471070|ref|ZP_05635069.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|384225828|ref|YP_005616991.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|384226404|ref|YP_005618155.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
gi|384226882|ref|YP_005618632.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|414562374|ref|YP_005617565.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|11131216|sp|P57124.1|ATPB_BUCAI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|254808135|sp|B8D8H3.1|ATPB_BUCA5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|254808136|sp|B8D6S7.1|ATPB_BUCAT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|25290462|pir||H84930 H+-transporting two-sector ATPase (EC 3.6.3.14) beta chain
[imported] - Buchnera sp. (strain APS)
gi|10038701|dbj|BAB12736.1| ATP synthase beta chain [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219621686|gb|ACL29842.1| ATP synthase subunit B [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624240|gb|ACL30395.1| ATP synthase subunit B [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
gi|311085758|gb|ADP65840.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086335|gb|ADP66416.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311086910|gb|ADP66990.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087501|gb|ADP67580.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 465
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 252/363 (69%), Positives = 295/363 (81%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + ++ K + + +KN I +VQQQ+G +VRTIA G++NG+KR IV D G
Sbjct: 16 VEFNQDSVPKIYNALEVKNKQYKLILEVQQQLGSGVVRTIAMGSSNGLKRGLIVTDLGHY 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSKKKS-----PIHTLPPKFSNQIFNNNILETG 669
I PVG+ TLGRI+NVLG+ IDNKG + + + IH PP + +Q ILETG
Sbjct: 76 IKVPVGEATLGRIINVLGETIDNKGALKNNQSDKIEYWEIHRSPPSYRDQASCREILETG 135
Query: 670 IKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDF 729
IKVIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIA+EH G SVF GVGER+REGNDF
Sbjct: 136 IKVIDLICPFSKGGKVGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFTGVGERTREGNDF 195
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
YHEM +S VLDKVSL+YGQMNEP GNRLRVA TGL+IAE+FR+ GKDVLLFIDNIYR+TL
Sbjct: 196 YHEMNDSQVLDKVSLVYGQMNEPPGNRLRVAFTGLTIAEKFRDEGKDVLLFIDNIYRYTL 255
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STKNG+ITSVQA+YVPADDLTDPSP+
Sbjct: 256 AGTEVSALLGRMPSAVGYQPTLAEEMGLLQERITSTKNGSITSVQAVYVPADDLTDPSPA 315
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLDST+ LSRQIA LGIYPAIDPL S S+QLDPYIVG+EHY+ A V+ LQ+Y+E
Sbjct: 316 TTFAHLDSTVTLSRQIASLGIYPAIDPLNSTSRQLDPYIVGDEHYETALGVQSILQRYQE 375
Query: 910 LKD 912
LKD
Sbjct: 376 LKD 378
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 23/287 (8%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRET-------VEKIAPGIMDRESVNEPLLT 243
++PVG LGRI+N GE IDNK +KN ++ + + P D+ S E L T
Sbjct: 77 KVPVGEATLGRIINVLGETIDNKGA--LKNNQSDKIEYWEIHRSPPSYRDQASCREILET 134
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N + ++ +G++ +
Sbjct: 135 GIKVIDLICPFSKGGKVGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFTGVGERTREGND 194
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHA 362
+++ +D +V + + +TG TI E FRD G+D L+ D++ ++
Sbjct: 195 FYHEMNDSQVLDKVSLVYGQMNEPPGNRLRVAFTGLTIAEKFRDEGKDVLLFIDNIYRYT 254
Query: 363 WAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPI 422
A ++S LL R P + + + + L +++I + NG++T+
Sbjct: 255 LAGTEVSALLGRMPSAVGY-------------QPTLAEEMGLLQERITSTKNGSITSVQA 301
Query: 423 IETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ D+T P + D + L + + PAI+ S SR
Sbjct: 302 VYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAIDPLNSTSR 348
>gi|407789779|ref|ZP_11136878.1| F0F1 ATP synthase subunit beta [Gallaecimonas xiamenensis 3-C-1]
gi|407205986|gb|EKE75949.1| F0F1 ATP synthase subunit beta [Gallaecimonas xiamenensis 3-C-1]
Length = 463
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/332 (72%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G + G+KR + T +PI PVG TLGRI++VLG+PID KG
Sbjct: 45 EVQQQLGGGVVRTIAMGPSEGLKRGMTINATQEPIQVPVGTQTLGRIMDVLGNPIDEKGP 104
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q ++ +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 105 IGEEERWSIHRAAPSYEEQSNSSELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 164
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 165 ELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMSESNVLDKVSLVYGQMNEPPGNRLRVA 224
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 225 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 284
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 285 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 344
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 345 SRQLDPLVVGEEHYGVARGVQTVLQRYKELKD 376
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 148/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T++ ++PVG + LGRI++ G ID K + R ++ + AP ++
Sbjct: 64 EGLKRGMTINATQEPIQVPVGTQTLGRIMDVLGNPIDEKGPIGEEERWSIHRAAPSYEEQ 123
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ +E L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 124 SNSSELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGV 183
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 184 GERTREGNDFYHEMSESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 243
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 244 FVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTK 290
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 291 TGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDP 350
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 351 LVVGEEHYGVAR----GVQTVLQRYKELK 375
>gi|333986134|ref|YP_004515344.1| ATP synthase subunit beta [Methylomonas methanica MC09]
gi|333810175|gb|AEG02845.1| ATP synthase subunit beta [Methylomonas methanica MC09]
Length = 457
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/359 (67%), Positives = 294/359 (81%), Gaps = 1/359 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E N+ K + +++K + + +VQQQ+G+ +VRTIA G T+G+ R V +TG
Sbjct: 13 VVDVEFPRDNLPKVYDALDVKGGLVL-EVQQQLGDGVVRTIAMGTTDGLSRGIEVTNTGD 71
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
I PVG TLGRI+NVLG+ ID KG I K+K IH P + Q N +LETGIKVI
Sbjct: 72 AIKVPVGKETLGRIMNVLGEAIDEKGPIGEKEKWVIHRDAPAYDEQAPANELLETGIKVI 131
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM
Sbjct: 132 DLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEM 191
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTE 793
+SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+TLAGTE
Sbjct: 192 TDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLFFVDNIYRYTLAGTE 251
Query: 794 VSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFT 853
VSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF
Sbjct: 252 VSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFA 311
Query: 854 HLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSRQIAELGIYPAIDPL+S S+QLDP ++G+EHY+ A V+ LQ+YKEL+D
Sbjct: 312 HLDATVVLSRQIAELGIYPAIDPLDSTSRQLDPLVIGQEHYETARAVQGILQRYKELRD 370
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 143/327 (43%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G + T ++PVG E LGRI+N GE ID K K + + + AP ++
Sbjct: 59 GLSRGIEVTNTGDAIKVPVGKETLGRIMNVLGEAIDEKGPIGEKEKWVIHRDAPAYDEQA 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
NE L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 PANELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E+FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PAI+ S SR
Sbjct: 286 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAIDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y+ + + G +L +Y+EL
Sbjct: 346 VIGQEHYETARAVQG----ILQRYKEL 368
>gi|423098347|ref|ZP_17086143.1| ATP synthase F1, beta subunit [Pseudomonas fluorescens Q2-87]
gi|397882868|gb|EJK99355.1| ATP synthase F1, beta subunit [Pseudomonas fluorescens Q2-87]
Length = 458
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 285/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V +TG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVNNTGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+++++ IH P F+ Q N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IDTEERWGIHRPAPTFAEQAGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGQEHYDTARGVQYVLQRYKELKD 371
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 140/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLDVNNTGAAISVPVGKATLGRIMDVLGNPIDEAGPIDTEERWGIHRPAPTFAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
NE L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 QGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 346 NVIGQEHYDTARG----VQYVLQRYKELK 370
>gi|148245074|ref|YP_001219768.1| F0F1 ATP synthase subunit beta [Candidatus Vesicomyosocius okutanii
HA]
gi|166222425|sp|A5CVI6.1|ATPB_VESOH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|146326901|dbj|BAF62044.1| F0F1-type ATP synthase beta subunit [Candidatus Vesicomyosocius
okutanii HA]
Length = 459
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/332 (73%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G++IVR IA G + G+KR V +TG+PI PVG TLGRI+NVLG+PIDN GE
Sbjct: 40 EVQQQLGDHIVRAIAMGGSEGLKRGLGVTNTGEPIKVPVGVKTLGRIMNVLGEPIDNAGE 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + IH P + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGQEVDWTIHRSAPDYDELAPTTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAI H G SVF GVGER+REGNDFYHEMKESNVL+KVSL+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIAHSGYSVFAGVGERTREGNDFYHEMKESNVLNKVSLVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLA EMG LQE
Sbjct: 220 LTGLTMAEYFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSRQ+AELGIYPA+DPL+S
Sbjct: 280 RITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQVAELGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP IVGEEHY VA V+ LQ+YKELKD
Sbjct: 340 SRQLDPLIVGEEHYNVARGVQGVLQRYKELKD 371
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 146/336 (43%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + + L +G T + ++PVG + LGRI+N GE IDN + + T+ +
Sbjct: 52 AIAMGGSEGLKRGLGVTNTGEPIKVPVGVKTLGRIMNVLGEPIDNAGEIGQEVDWTIHRS 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP + E L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 112 APDYDELAPTTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIAHSG 171
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++K N ++ +V + + TG T+ EYFRD
Sbjct: 172 YSVFAGVGERTREGNDFYHEMKESNVLNKVSLVYGQMNEPPGNRLRVALTGLTMAEYFRD 231
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L+ D++ ++ A ++S LL R P + + L ER
Sbjct: 232 EGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQER----------- 280
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
I + G++T+ + D+T P + D + L + PA++ S
Sbjct: 281 --ITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQVAELGIYPAVDPLDS 338
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR + G Y + + + G +L +Y+EL+
Sbjct: 339 TSRQLDPLIVGEEHYNVARGVQG----VLQRYKELK 370
>gi|424925785|ref|ZP_18349146.1| ATP synthase, F1 beta subunit [Pseudomonas fluorescens R124]
gi|404306945|gb|EJZ60907.1| ATP synthase, F1 beta subunit [Pseudomonas fluorescens R124]
Length = 458
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V +TG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLGVNNTGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P F+ Q N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWGIHRAAPSFAEQAGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G EHY+ A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGNEHYETARGVQYVLQRYKELKD 371
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 141/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLGVNNTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERWGIHRAAPSFAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
NE L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 QGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 346 NVIGNEHYETARG----VQYVLQRYKELK 370
>gi|251793675|ref|YP_003008405.1| ATP synthase F1 subunit beta [Aggregatibacter aphrophilus NJ8700]
gi|422337671|ref|ZP_16418641.1| ATP synthase subunit beta [Aggregatibacter aphrophilus F0387]
gi|247535072|gb|ACS98318.1| ATP synthase F1, beta subunit [Aggregatibacter aphrophilus NJ8700]
gi|353345003|gb|EHB89301.1| ATP synthase subunit beta [Aggregatibacter aphrophilus F0387]
Length = 457
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/356 (68%), Positives = 297/356 (83%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR+ V +T KPI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGASDGLKRSLSVENTNKPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I ++++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGVKTLGRIMNVLGEPIDERGPIGAEEEWAIHRSAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKD 370
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 139/318 (43%), Gaps = 23/318 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T K +PVG + LGRI+N GE ID + + + + AP ++ + E L TGI
Sbjct: 69 TNKPISVPVGVKTLGRIMNVLGEPIDERGPIGAEEEWAIHRSAPSYEEQSNSTELLETGI 128
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID + P KG + + G GKT ++ I N + ++ +G++ +
Sbjct: 129 KVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFY 188
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
+++ N +D +V + + TG T+ E FRD G+D L D++ ++ A
Sbjct: 189 HEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLA 248
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P V Y L E + +++I + G++T+ +
Sbjct: 249 GTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKTGSITSVQAVY 295
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P + D + L + + PA++ S SR V G Y +
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVA 355
Query: 480 KKLSGDIRIMLAQYRELE 497
+ + G +L +Y+EL+
Sbjct: 356 RGVQG----ILQRYKELK 369
>gi|410085838|ref|ZP_11282553.1| ATP synthase beta chain [Morganella morganii SC01]
gi|421493148|ref|ZP_15940506.1| ATPD [Morganella morganii subsp. morganii KT]
gi|455737627|ref|YP_007503893.1| ATP synthase beta chain [Morganella morganii subsp. morganii KT]
gi|400192776|gb|EJO25914.1| ATPD [Morganella morganii subsp. morganii KT]
gi|409767783|gb|EKN51857.1| ATP synthase beta chain [Morganella morganii SC01]
gi|455419190|gb|AGG29520.1| ATP synthase beta chain [Morganella morganii subsp. morganii KT]
Length = 460
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/332 (72%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G ++G+ RN V D G PI PVG TLGRI+NVLGDPID KG+
Sbjct: 42 EVQQQLGGGVVRCIAMGTSDGLSRNLEVTDLGHPIEVPVGVKTLGRIMNVLGDPIDMKGD 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++K IH P + + +LETGIKV+DL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGAEEKWSIHRAAPTYEELSNSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 373
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 139/313 (44%), Gaps = 23/313 (7%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDS 250
E+PVG + LGRI+N G+ ID K + + ++ + AP + + E L TGIK +D
Sbjct: 77 EVPVGVKTLGRIMNVLGDPIDMKGDIGAEEKWSIHRAAPTYEELSNSQELLETGIKVMDL 136
Query: 251 MIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKY 309
+ P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 137 ICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTD 196
Query: 310 YNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQIS 369
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++S
Sbjct: 197 SNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVS 256
Query: 370 LLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGD 429
LL R P + L E + +++I + G++T+ + D
Sbjct: 257 ALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPADD 303
Query: 430 VTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSG 484
+T P + D + L + + PA++ S SR V G Y + +
Sbjct: 304 LTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARG--- 360
Query: 485 DIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 361 -VQSILQRYQELK 372
>gi|374334271|ref|YP_005090958.1| F0F1 ATP synthase subunit beta [Oceanimonas sp. GK1]
gi|372983958|gb|AEY00208.1| F0F1 ATP synthase subunit beta [Oceanimonas sp. GK1]
Length = 462
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/332 (72%), Positives = 285/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQIG +VR IA G+++G++R + +T +PI PVG TLGRI++VLG+PID KG+
Sbjct: 44 EVQQQIGGGVVRCIAMGSSDGLRRGLEIENTNQPIQVPVGVQTLGRIMDVLGNPIDEKGD 103
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 104 IGEEERWSIHREAPSYEEQSSSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 163
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 164 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVA 223
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 224 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 283
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 284 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAALGIYPAVDPLDST 343
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 344 SRQLDPQVVGEEHYSVARGVQTVLQRYKELKD 375
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T + ++PVG + LGRI++ G ID K + R ++ + AP ++
Sbjct: 64 GLRRGLEIENTNQPIQVPVGVQTLGRIMDVLGNPIDEKGDIGEEERWSIHREAPSYEEQS 123
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 124 SSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 183
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 184 ERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 243
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 244 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 290
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 291 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAALGIYPAVDPLDSTSRQLDPQ 350
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 351 VVGEEHYSVARG----VQTVLQRYKELK 374
>gi|87121037|ref|ZP_01076928.1| ATP synthase subunit B [Marinomonas sp. MED121]
gi|86163529|gb|EAQ64803.1| ATP synthase subunit B [Marinomonas sp. MED121]
Length = 458
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 240/356 (67%), Positives = 295/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + ++ + +VQQQ+G+ IVR IA G+T G+KR +V +T P+
Sbjct: 16 VEFPRDSVPKVYDALTIEGKELVLEVQQQLGDGIVRAIAMGSTEGMKRGLVVDNTNNPVS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG+PID KG I +++ IH P ++ Q +N +LETGIKVIDL+
Sbjct: 76 VPVGTKTLGRIMDVLGNPIDEKGPIGEEERWAIHREAPSYAEQSSDNALLETGIKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 196 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF+HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFSHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPAIDPL+S S+QLDP ++G+EHY VA V+ LQ+YKELKD
Sbjct: 316 ATVVLSRDIASLGIYPAIDPLDSTSRQLDPLVIGQEHYDVARGVQTVLQRYKELKD 371
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 145/336 (43%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + + + +G T +PVG + LGRI++ G ID K + R + +
Sbjct: 52 AIAMGSTEGMKRGLVVDNTNNPVSVPVGTKTLGRIMDVLGNPIDEKGPIGEEERWAIHRE 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP ++ S N L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 112 APSYAEQSSDNALLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 171
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++ N +D +V + + TG T+ E FRD
Sbjct: 172 YSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRD 231
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L D++ ++ A ++S LL R P + L E + +
Sbjct: 232 EGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------Q 278
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P S D + L ++ + PAI+ S
Sbjct: 279 ERITSTKTGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRDIASLGIYPAIDPLDS 338
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y + + ++ +L +Y+EL+
Sbjct: 339 TSRQLDPLVIGQEHYDVARG----VQTVLQRYKELK 370
>gi|330505856|ref|YP_004382725.1| F0F1 ATP synthase subunit beta [Pseudomonas mendocina NK-01]
gi|328920142|gb|AEB60973.1| F0F1 ATP synthase subunit beta [Pseudomonas mendocina NK-01]
Length = 458
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR + T K I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDITRTNKAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P ++ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEEQWEIHRAAPSYAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G EHY+ A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGTEHYETARGVQYVLQRYKELKD 371
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 143/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T K +PVG LGRI++ G ID + + + + AP ++
Sbjct: 59 EGLKRGLDITRTNKAISVPVGKATLGRIMDVLGNPIDEAGPIGEEEQWEIHRAAPSYAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 KGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 346 NVIGTEHYETARG----VQYVLQRYKELK 370
>gi|94501602|ref|ZP_01308119.1| ATP synthase F1, beta subunit [Bermanella marisrubri]
gi|94426285|gb|EAT11276.1| ATP synthase F1, beta subunit [Oceanobacter sp. RED65]
Length = 458
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 240/356 (67%), Positives = 292/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + ++ +VQQQ+G+ +VRTIA G+T G+KR + +T +PI
Sbjct: 16 VEFPRDSVPKVYDALKVEGGKITLEVQQQLGDGMVRTIAMGSTEGLKRGLVAENTNQPIQ 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLGDPID KG I ++++ IH P + Q +LETG+KVIDL+
Sbjct: 76 VPVGKETLGRIMDVLGDPIDEKGPIGEQERASIHRKAPSYDEQAGGQELLETGVKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM ES
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMSES 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERITSTKKGSITSVQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA GIYPAIDPL+S S+QLDP ++G+EHY +A V+ LQ++KELKD
Sbjct: 316 ATVVLSRDIASKGIYPAIDPLDSTSRQLDPLVIGQEHYDIARGVQTVLQRFKELKD 371
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 147/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T + ++PVG E LGRI++ G+ ID K + R ++ + AP ++
Sbjct: 59 EGLKRGLVAENTNQPIQVPVGKETLGRIMDVLGDPIDEKGPIGEQERASIHRKAPSYDEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
E L TG+K ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGQELLETGVKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 GERTREGNDFYHEMSESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PAI+ S SR
Sbjct: 286 KGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASKGIYPAIDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y I + ++ +L +++EL+
Sbjct: 346 LVIGQEHYDIARG----VQTVLQRFKELK 370
>gi|112791406|gb|ABI21973.1| ATP synthase beta subunit, partial [Erwinia pyrifoliae DSM 12163]
Length = 421
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G+++G+KR VD PI PVG TLGRI+NVLG+PID KG+
Sbjct: 17 EVQQQLGGGVVRTIAMGSSDGLKRGLEAVDLQHPIEVPVGTATLGRIMNVLGEPIDMKGD 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRSAPSYEDQSNSQDLLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA EH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 348
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + E+PVG LGRI+N GE ID K + R + + AP D+
Sbjct: 37 GLKRGLEAVDLQHPIEVPVGTATLGRIMNVLGEPIDMKGDIGEEERWAIHRSAPSYEDQS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ + L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NSQDLLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 217 IDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDTARG----VQSLLQRYQELK 347
>gi|292493904|ref|YP_003529343.1| ATP synthase F1 subunit beta [Nitrosococcus halophilus Nc4]
gi|291582499|gb|ADE16956.1| ATP synthase F1, beta subunit [Nitrosococcus halophilus Nc4]
Length = 458
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G+ R V +TG PI PVG TLGRI++VLGDP+D G
Sbjct: 40 EVQQQLGDGVVRTIAMGSSDGLSRGMAVTNTGSPISVPVGAKTLGRIMDVLGDPVDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ +++ IH P + +LETGIKV+DL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 VGEEERWAIHRKAPTYEELSPATELLETGIKVVDLICPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA EH G SVF GVGER+REGNDFYHEMKES VLDKVSL+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIATEHAGYSVFAGVGERTREGNDFYHEMKESQVLDKVSLVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEYFREEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELGIYPA+DPL+S
Sbjct: 280 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP IVG+EHY+VA V+ LQ+YKELKD
Sbjct: 340 SRQLDPLIVGQEHYQVARSVQGNLQRYKELKD 371
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G T +PVG + LGRI++ G+ +D + R + + AP +
Sbjct: 60 GLSRGMAVTNTGSPISVPVGAKTLGRIMDVLGDPVDEAGPVGEEERWAIHRKAPTYEELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCIG 294
E L TGIK +D + P KG + + G GKT ++ I N ++ ++ +G
Sbjct: 120 PATELLETGIKVVDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHAGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K +D +V + + TG T+ EYFR+ G+D L+
Sbjct: 180 ERTREGNDFYHEMKESQVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEYFREEGRDVLLF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 240 IDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 287 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y++ + + G+ L +Y+EL+
Sbjct: 347 IVGQEHYQVARSVQGN----LQRYKELK 370
>gi|112791400|gb|ABI21970.1| ATP synthase beta subunit, partial [Erwinia rhapontici]
Length = 418
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/347 (69%), Positives = 290/347 (83%), Gaps = 2/347 (0%)
Query: 568 FRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLG 625
+ + +KN + + +VQQQ+G +VRTIA G+++G+KR VD PI PVG TLG
Sbjct: 2 YSALEVKNGDARLVLEVQQQLGGGVVRTIAMGSSDGLKRGLEAVDLQHPIEVPVGVATLG 61
Query: 626 RILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKI 685
RI+NVLG+PID KG+I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+
Sbjct: 62 RIMNVLGEPIDMKGDIGEEERWAIHRAAPSYEDQSNSQELLETGIKVIDLMCPFAKGGKV 121
Query: 686 GLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLI 745
GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181
Query: 746 YGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAV 805
YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAV
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAV 241
Query: 806 GYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQI 865
GYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQI
Sbjct: 242 GYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 301
Query: 866 AELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
A LGIYPA+DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 348
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + E+PVG LGRI+N GE ID K + R + + AP D+
Sbjct: 37 GLKRGLEAVDLQHPIEVPVGVATLGRIMNVLGEPIDMKGDIGEEERWAIHRAAPSYEDQS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 217 IDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDTARG----VQSLLQRYQELK 347
>gi|416894151|ref|ZP_11924961.1| F0F1 ATP synthase subunit beta [Aggregatibacter aphrophilus ATCC
33389]
gi|347813620|gb|EGY30286.1| F0F1 ATP synthase subunit beta [Aggregatibacter aphrophilus ATCC
33389]
Length = 457
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/356 (68%), Positives = 296/356 (83%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +T KPI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGASDGLKRGLSVENTDKPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I ++++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGVKTLGRIMNVLGEPIDERGPIGAEEEWAIHRSAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKD 370
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T+K +PVG + LGRI+N GE ID + + + + AP ++
Sbjct: 59 GLKRGLSVENTDKPISVPVGVKTLGRIMNVLGEPIDERGPIGAEEEWAIHRSAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|404400617|ref|ZP_10992201.1| F0F1 ATP synthase subunit beta [Pseudomonas fuscovaginae UPB0736]
Length = 458
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V +TG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVNNTGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P F+ Q N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWGIHRAAPSFAEQAGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G EHY+ A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGNEHYETARGVQYVLQRYKELKD 371
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 141/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLDVNNTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERWGIHRAAPSFAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
NE L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 QGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 346 NVIGNEHYETARG----VQYVLQRYKELK 370
>gi|1073879|pir||D64071 H+-transporting two-sector ATPase (EC 3.6.3.14) beta chain -
Haemophilus influenzae (strain Rd KW20)
Length = 468
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 295/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +T PI
Sbjct: 27 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGTSDGLKRGLKVENTNNPIQ 85
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 86 VPVGTKTLGRIMNVLGEPIDEQGAIGEEERWAIHRSAPSYEEQSNSTELLETGIKVIDLI 145
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 146 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 205
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 206 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 265
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 266 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 325
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 326 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKD 381
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID + + R + + AP ++
Sbjct: 70 GLKRGLKVENTNNPIQVPVGTKTLGRIMNVLGEPIDEQGAIGEEERWAIHRSAPSYEEQS 129
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 130 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 189
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 190 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 249
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 250 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 296
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 297 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 356
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 357 VVGQEHYDVARGVQG----ILQRYKELK 380
>gi|145630340|ref|ZP_01786121.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae R3021]
gi|145632746|ref|ZP_01788480.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 3655]
gi|145634523|ref|ZP_01790232.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittAA]
gi|145636253|ref|ZP_01791922.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittHH]
gi|145640453|ref|ZP_01796037.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae R3021]
gi|148825242|ref|YP_001289995.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittEE]
gi|229846566|ref|ZP_04466674.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 7P49H1]
gi|260582255|ref|ZP_05850048.1| ATP synthase F1, beta subunit [Haemophilus influenzae NT127]
gi|386265129|ref|YP_005828621.1| Membrane-bound ATP synthase, F1 sector, beta-subunit [Haemophilus
influenzae R2846]
gi|166201709|sp|A5UA11.1|ATPB_HAEIE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|144984075|gb|EDJ91512.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae R3021]
gi|144986941|gb|EDJ93493.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 3655]
gi|145268068|gb|EDK08063.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittAA]
gi|145270418|gb|EDK10352.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittHH]
gi|145275039|gb|EDK14901.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 22.4-21]
gi|148715402|gb|ABQ97612.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittEE]
gi|229810659|gb|EEP46377.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 7P49H1]
gi|260094623|gb|EEW78518.1| ATP synthase F1, beta subunit [Haemophilus influenzae NT127]
gi|309972365|gb|ADO95566.1| Membrane-bound ATP synthase, F1 sector, beta-subunit [Haemophilus
influenzae R2846]
Length = 457
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 295/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGTSDGLKRGLKVENTNNPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEQGAIGEEERWAIHRSAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKD 370
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID + + R + + AP ++
Sbjct: 59 GLKRGLKVENTNNPIQVPVGTKTLGRIMNVLGEPIDEQGAIGEEERWAIHRSAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|16272426|ref|NP_438639.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae Rd KW20]
gi|68249081|ref|YP_248193.1| ATP synthase F0F1 subunit beta [Haemophilus influenzae 86-028NP]
gi|145628859|ref|ZP_01784659.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 22.1-21]
gi|145638605|ref|ZP_01794214.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittII]
gi|229844360|ref|ZP_04464500.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 6P18H1]
gi|260580457|ref|ZP_05848285.1| ATP synthase F1, beta subunit [Haemophilus influenzae RdAW]
gi|319775594|ref|YP_004138082.1| F1 sector of membrane-bound ATP synthase subunit beta [Haemophilus
influenzae F3047]
gi|329122360|ref|ZP_08250947.1| ATP synthase F1 sector beta subunit [Haemophilus aegyptius ATCC
11116]
gi|378696680|ref|YP_005178638.1| F1 sector of membrane-bound ATP synthase, beta subunit [Haemophilus
influenzae 10810]
gi|2506208|sp|P43715.2|ATPB_HAEIN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|81336513|sp|Q4QN64.1|ATPB_HAEI8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|1573457|gb|AAC22137.1| ATP synthase F1, subunit beta (atpD) [Haemophilus influenzae Rd
KW20]
gi|68057280|gb|AAX87533.1| ATP synthase beta chain [Haemophilus influenzae 86-028NP]
gi|144979329|gb|EDJ89015.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 22.1-21]
gi|145272200|gb|EDK12108.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittII]
gi|229812609|gb|EEP48298.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 6P18H1]
gi|260092799|gb|EEW76734.1| ATP synthase F1, beta subunit [Haemophilus influenzae RdAW]
gi|301169199|emb|CBW28796.1| F1 sector of membrane-bound ATP synthase, beta subunit [Haemophilus
influenzae 10810]
gi|309750106|gb|ADO80090.1| Membrane-bound ATP synthase, F1 sector, beta-subunit [Haemophilus
influenzae R2866]
gi|317450185|emb|CBY86401.1| F1 sector of membrane-bound ATP synthase, beta subunit [Haemophilus
influenzae F3047]
gi|327473642|gb|EGF19061.1| ATP synthase F1 sector beta subunit [Haemophilus aegyptius ATCC
11116]
Length = 457
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 295/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGTSDGLKRGLKVENTNNPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEQGAIGEEERWAIHRSAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKD 370
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID + + R + + AP ++
Sbjct: 59 GLKRGLKVENTNNPIQVPVGTKTLGRIMNVLGEPIDEQGAIGEEERWAIHRSAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|444921828|ref|ZP_21241658.1| ATP synthase subunit beta [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507101|gb|ELV07283.1| ATP synthase subunit beta [Wohlfahrtiimonas chitiniclastica SH04]
Length = 457
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 285/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R+ V+DT PI PVG TLGRI+NVLG+P+D+ G
Sbjct: 39 EVQQQLGDGVVRTIAMGSSDGLQRDLTVIDTKAPISVPVGAATLGRIMNVLGEPVDHAGP 98
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
++++ IH PP + Q + +LETGIKVIDLLCPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 99 VSTEAHWGIHRKPPSYEEQSGSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMM 158
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFYHEMK+SNVLDKV+++YGQMNEP GNRLRVA
Sbjct: 159 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVA 218
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ GKDVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTL+EEMG LQE
Sbjct: 219 LTGLTMAEYFRDEGKDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLSEEMGVLQE 278
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+TIVLSR IA LGIYPA+DPL+S
Sbjct: 279 RITSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATIVLSRDIASLGIYPAVDPLDST 338
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY+VA V+ LQ+YKELKD
Sbjct: 339 SRQLDPQVIGKEHYEVARGVQTVLQRYKELKD 370
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 144/318 (45%), Gaps = 23/318 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T+ +PVG LGRI+N GE +D+ + + + P ++ E L TGI
Sbjct: 69 TKAPISVPVGAATLGRIMNVLGEPVDHAGPVSTEAHWGIHRKPPSYEEQSGSTELLETGI 128
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 129 KVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFY 188
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
+++K N +D +V + + TG T+ EYFRD G+D L+ D++ ++ A
Sbjct: 189 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEGKDVLLFIDNIYRYTLA 248
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P V Y + + + + +++I + G++T+ +
Sbjct: 249 GTEVSALLGR------MPSAVGY-------QPTLSEEMGVLQERITSTKKGSITSVQAVY 295
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P + D I L ++ + PA++ S SR V G Y++
Sbjct: 296 VPADDLTDPSPATTFAHLDATIVLSRDIASLGIYPAVDPLDSTSRQLDPQVIGKEHYEVA 355
Query: 480 KKLSGDIRIMLAQYRELE 497
+ ++ +L +Y+EL+
Sbjct: 356 RG----VQTVLQRYKELK 369
>gi|34500032|gb|AAQ73598.1| ATP synthase beta subunit [Avibacterium gallinarum]
Length = 444
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 295/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + +N++ + + +VQQQ+G IVR IA G+++G+KR V +T KPI
Sbjct: 16 VEFPQDAVPKVYDALNVETGLVL-EVQQQLGGGIVRCIAMGSSDGLKRGLSVSNTAKPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I +++ IH P + +Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEQGPIGAEETWSIHRPAPSYEDQANSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGALQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ ++Y+ELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGTYKRYRELKD 370
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG + LGRI+N GE ID + + ++ + AP D+
Sbjct: 59 GLKRGLSVSNTAKPISVPVGTKTLGRIMNVLGEPIDEQGPIGAEETWSIHRPAPSYEDQA 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGAL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G + +YREL+
Sbjct: 346 VVGQEHYDVARGVQGTYK----RYRELK 369
>gi|387126120|ref|YP_006294725.1| ATP synthase subunit beta [Methylophaga sp. JAM1]
gi|386273182|gb|AFI83080.1| ATP synthase beta chain [Methylophaga sp. JAM1]
Length = 458
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/332 (72%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G T+G+KR+ V +TGK I PVG TLGRI++VLG+PID KG+
Sbjct: 40 EVQQQLGDGVVRTIAMGTTDGLKRSLAVSNTGKAISVPVGQKTLGRIMDVLGNPIDEKGD 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P F +N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWGIHRKAPAFDELSASNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEFFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IAELGIYPAIDPL+S
Sbjct: 280 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRSIAELGIYPAIDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG EHY +A V+ LQ+YKELKD
Sbjct: 340 SRQLDPLVVGNEHYDIARGVQNTLQRYKELKD 371
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 138/318 (43%), Gaps = 23/318 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T K +PVG + LGRI++ G ID K + R + + AP + + NE L TGI
Sbjct: 70 TGKAISVPVGQKTLGRIMDVLGNPIDEKGDIGEEERWGIHRKAPAFDELSASNELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID + P KG + + G GKT ++ I N + ++ +G++ +
Sbjct: 130 KVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
+++ N +D +V + + TG T+ E+FRD G+D L D++ ++ A
Sbjct: 190 HEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLFFVDNIYRYTLA 249
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P + L E + +++I + G++T+ +
Sbjct: 250 GTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSIQAVY 296
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P + D + L ++ PAI+ S SR V G Y I
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRSIAELGIYPAIDPLDSTSRQLDPLVVGNEHYDIA 356
Query: 480 KKLSGDIRIMLAQYRELE 497
+ ++ L +Y+EL+
Sbjct: 357 RG----VQNTLQRYKELK 370
>gi|260595802|ref|YP_003208373.1| F0F1 ATP synthase subunit beta [Cronobacter turicensis z3032]
gi|260214979|emb|CBA26614.1| ATP synthase subunit beta [Cronobacter turicensis z3032]
Length = 460
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R +V D PI PVG TLGRI+NVLG PID KG+
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLVVTDLEHPIEVPVGKATLGRIMNVLGQPIDMKGD 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFREEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 62 GLRRGLVVTDLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FR+ G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFREEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|350553715|ref|ZP_08922879.1| ATP synthase subunit beta [Thiorhodospira sibirica ATCC 700588]
gi|349790052|gb|EGZ43977.1| ATP synthase subunit beta [Thiorhodospira sibirica ATCC 700588]
Length = 459
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 285/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V +TG PI PVG TLGRI++VLG IDN+G
Sbjct: 40 EVQQQLGDGVVRTIAMGSSDGLRRGISVSNTGSPISVPVGKGTLGRIMDVLGTAIDNQGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ ++++ IH P + Q + +LETGIKVIDLLCPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 VQTEERWEIHRPAPSYEEQAGSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVL+FIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEYFRDEGRDVLMFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELGIYPA+DPL+S
Sbjct: 280 RITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G EHY A V+ LQ+YKELKD
Sbjct: 340 SRQLDPLVIGHEHYNTARAVQNTLQRYKELKD 371
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 140/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G IDN+ + R + + AP ++
Sbjct: 60 GLRRGISVSNTGSPISVPVGKGTLGRIMDVLGTAIDNQGPVQTEERWEIHRPAPSYEEQA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 120 GSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ EYFRD G+D L+
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLMF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 240 IDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKK 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 287 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ L +Y+EL+
Sbjct: 347 VIGHEHYNTARA----VQNTLQRYKELK 370
>gi|319898003|ref|YP_004136200.1| f1 sector of membrane-bound ATP synthase, beta subunit [Haemophilus
influenzae F3031]
gi|317433509|emb|CBY81892.1| F1 sector of membrane-bound ATP synthase, beta subunit [Haemophilus
influenzae F3031]
Length = 457
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 295/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGTSDGLKRGLKVENTNNPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEQGAIGEEERWAIHRSAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKD 370
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID + + R + + AP ++
Sbjct: 59 GLKRGLKVENTNNPIQVPVGTKTLGRIMNVLGEPIDEQGAIGEEERWAIHRSAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|334702421|ref|ZP_08518287.1| F0F1 ATP synthase subunit beta [Aeromonas caviae Ae398]
Length = 462
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/332 (72%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQIG +VR I G+++G++R VV++GK I PVG TLGRI+NVLGDPID KG
Sbjct: 44 EVQQQIGGGVVRCITMGSSDGLRRGLEVVNSGKAIQVPVGTSTLGRIMNVLGDPIDEKGP 103
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 104 IGEEERWSIHREAPSYEDQSNSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 163
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 164 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMMESNVLDKVSLVYGQMNEPPGNRLRVA 223
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 224 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 283
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 284 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAALGIYPAVDPLDST 343
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY+ A V+ LQ+YKELKD
Sbjct: 344 SRQLDPLVVGKEHYETARGVQTVLQRYKELKD 375
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + K ++PVG LGRI+N G+ ID K + R ++ + AP D+
Sbjct: 64 GLRRGLEVVNSGKAIQVPVGTSTLGRIMNVLGDPIDEKGPIGEEERWSIHREAPSYEDQS 123
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 124 NSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 183
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 184 ERTREGNDFYHEMMESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 243
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 244 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 290
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 291 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAALGIYPAVDPLDSTSRQLDPL 350
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 351 VVGKEHYETAR----GVQTVLQRYKELK 374
>gi|429119344|ref|ZP_19180066.1| ATP synthase beta chain [Cronobacter sakazakii 680]
gi|426326125|emb|CCK10803.1| ATP synthase beta chain [Cronobacter sakazakii 680]
Length = 757
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG PID KG+
Sbjct: 339 EVQQQLGGGIVRTIAMGSSDGLRRGLPVADLEHPIEVPVGKATLGRIMNVLGQPIDMKGD 398
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 399 IGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 458
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 459 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 518
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 519 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 578
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 579 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 638
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 639 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 670
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 138/327 (42%), Gaps = 23/327 (7%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G E E+PVG LGRI+N G+ ID K + R + + AP + S
Sbjct: 360 LRRGLPVADLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELSS 419
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK ID M P KG + + G GKT ++ I N + ++ +G+
Sbjct: 420 SQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGE 479
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 480 RTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFV 539
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + + L ER I + G
Sbjct: 540 DNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQER-------------ITSTKTG 586
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L + + PA++ S SR V
Sbjct: 587 SITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLV 646
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y + ++ +L +Y+EL+
Sbjct: 647 VGQEHYDTAR----GVQSILQRYQELK 669
>gi|335041779|ref|ZP_08534806.1| F0F1-type ATP synthase, beta subunit [Methylophaga
aminisulfidivorans MP]
gi|333788393|gb|EGL54275.1| F0F1-type ATP synthase, beta subunit [Methylophaga
aminisulfidivorans MP]
Length = 458
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/332 (72%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VR IA G T+G+KR+ V +TGK I PVG TLGRI++VLG+PID KG+
Sbjct: 40 EVQQQLGDGVVRAIAMGTTDGLKRDLAVSNTGKAISVPVGKKTLGRIMDVLGNPIDEKGD 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P F +N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWGIHRKAPSFDELAASNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEFFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IAELGIYPAIDPL+S
Sbjct: 280 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRSIAELGIYPAIDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG EHY VA V+ LQ+YKELKD
Sbjct: 340 SRQLDPLVVGNEHYNVARGVQGTLQRYKELKD 371
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 138/318 (43%), Gaps = 23/318 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T K +PVG + LGRI++ G ID K + R + + AP + + NE L TGI
Sbjct: 70 TGKAISVPVGKKTLGRIMDVLGNPIDEKGDIGEEERWGIHRKAPSFDELAASNELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID + P KG + + G GKT ++ I N + ++ +G++ +
Sbjct: 130 KVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
+++ N +D +V + + TG T+ E+FRD G+D L D++ ++ A
Sbjct: 190 HEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLFFVDNIYRYTLA 249
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P + L E + +++I + G++T+ +
Sbjct: 250 GTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSIQAVY 296
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P + D + L ++ PAI+ S SR V G Y +
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRSIAELGIYPAIDPLDSTSRQLDPLVVGNEHYNVA 356
Query: 480 KKLSGDIRIMLAQYRELE 497
+ + G L +Y+EL+
Sbjct: 357 RGVQG----TLQRYKELK 370
>gi|165977082|ref|YP_001652675.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|226739969|sp|B0BRX2.1|ATPB_ACTPJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|165877183|gb|ABY70231.1| ATP synthase beta chain [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
Length = 457
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/356 (68%), Positives = 293/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +TG PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGLVRCIALGTSDGLKRGLKVENTGNPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID KG I + + IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEKGPIGEEARWDIHRAAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKD 370
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID K + R + + AP ++
Sbjct: 59 GLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEKGPIGEEARWDIHRAAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G L +Y+EL+
Sbjct: 346 VVGEEHYNVARGVQG----TLQRYKELK 369
>gi|359781135|ref|ZP_09284360.1| F0F1 ATP synthase subunit beta [Pseudomonas psychrotolerans L19]
gi|359371195|gb|EHK71761.1| F0F1 ATP synthase subunit beta [Pseudomonas psychrotolerans L19]
Length = 458
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/356 (67%), Positives = 295/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + F + ++ + +VQQQ+G+ +VRTIA G+T G+KR V +TG+ I
Sbjct: 16 VEFPRDAVPRVFDALKVQGAETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNVGNTGEAIK 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG+PID G I +++ IH P ++ Q N++LETGIKVIDL+
Sbjct: 76 VPVGVKTLGRIMDVLGNPIDEAGPIGEEERWEIHRKAPSYAEQAGGNDLLETGIKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERITSTKLGSITSVQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 316 ATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTARGVQYVLQRYKELKD 371
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 144/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T + ++PVG + LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLNVGNTGEAIKVPVGVKTLGRIMDVLGNPIDEAGPIGEEERWEIHRKAPSYAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 LGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 346 NVIGQEHYDTARG----VQYVLQRYKELK 370
>gi|52426401|ref|YP_089538.1| F0F1 ATP synthase subunit beta [Mannheimia succiniciproducens
MBEL55E]
gi|81825450|sp|Q65Q07.1|ATPB_MANSM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|52308453|gb|AAU38953.1| AtpD protein [Mannheimia succiniciproducens MBEL55E]
Length = 458
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/356 (68%), Positives = 292/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E E + K + + + +VQQQ+G IVR IA G+++G+KR V +TGKPI
Sbjct: 16 VEFPENAVPKVYDALKVAEGGLTLEVQQQLGGGIVRCIAMGSSDGLKRGLSVSNTGKPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+P+D +G I ++++ IH P + Q + +LETGIKVIDL+
Sbjct: 76 VPVGTKTLGRIMNVLGEPVDEQGPIGAEEEWAIHREAPSYEEQSNSTELLETGIKVIDLI 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMTDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 316 STVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKD 371
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG + LGRI+N GE +D + + + + AP ++
Sbjct: 60 GLKRGLSVSNTGKPISVPVGTKTLGRIMNVLGEPVDEQGPIGAEEEWAIHREAPSYEEQS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 120 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 180 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 240 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPQ 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 347 VVGQEHYDVARGVQG----ILQRYKELK 370
>gi|387773091|ref|ZP_10128688.1| ATP synthase F1, beta subunit [Haemophilus parahaemolyticus HK385]
gi|386905453|gb|EIJ70219.1| ATP synthase F1, beta subunit [Haemophilus parahaemolyticus HK385]
Length = 457
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/356 (68%), Positives = 293/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +TG PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGLVRCIALGTSDGLKRGLKVENTGNPIE 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID KG I + + IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEKGPIGEEARWAIHRAAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKD 370
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T E+PVG + LGRI+N GE ID K + R + + AP ++
Sbjct: 59 GLKRGLKVENTGNPIEVPVGTKTLGRIMNVLGEPIDEKGPIGEEARWAIHRAAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G L +Y+EL+
Sbjct: 346 VVGEEHYNVARGVQG----TLQRYKELK 369
>gi|238921743|ref|YP_002935258.1| ATP synthase F1, beta subunit , putative [Edwardsiella ictaluri
93-146]
gi|269140874|ref|YP_003297575.1| F0F1-type ATP synthase subunit beta [Edwardsiella tarda EIB202]
gi|387869319|ref|YP_005700788.1| ATP synthase subunit beta [Edwardsiella tarda FL6-60]
gi|259585444|sp|C5BF40.1|ATPB_EDWI9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|238871312|gb|ACR71023.1| ATP synthase F1, beta subunit , putative [Edwardsiella ictaluri
93-146]
gi|267986535|gb|ACY86364.1| F0F1-type ATP synthase, beta subunit [Edwardsiella tarda EIB202]
gi|304560632|gb|ADM43296.1| ATP synthase beta chain [Edwardsiella tarda FL6-60]
Length = 460
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/361 (67%), Positives = 294/361 (81%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + + K + + +K + + +VQQQ+G +VR IA G+++G++R V D
Sbjct: 13 VVDVEFPQDAVPKVYNALEVKGGATKLVLEVQQQLGGGVVRCIAMGSSDGLRRGLDVEDQ 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
PI PVG TLGRI+NVLGDP+D KGEI +++ IH P + + + +LETGIK
Sbjct: 73 NHPIEVPVGKATLGRIMNVLGDPVDMKGEIGEEERWAIHRAAPSYEDLSNSQELLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
VIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM +SNVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAG
Sbjct: 193 EMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 137/314 (43%), Gaps = 23/314 (7%)
Query: 190 FEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSID 249
E+PVG LGRI+N G+ +D K + + R + + AP D + E L TGIK ID
Sbjct: 76 IEVPVGKATLGRIMNVLGDPVDMKGEIGEEERWAIHRAAPSYEDLSNSQELLETGIKVID 135
Query: 250 SMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLK 308
+ P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 136 LICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMT 195
Query: 309 YYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQI 368
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++
Sbjct: 196 DSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEV 255
Query: 369 SLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEG 428
S LL R P + L E + +++I + G++T+ +
Sbjct: 256 SALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPAD 302
Query: 429 DVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLS 483
D+T P + D + L + + PA++ S SR V G Y +
Sbjct: 303 DLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARG-- 360
Query: 484 GDIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 361 --VQSILQRYQELK 372
>gi|389680374|ref|ZP_10171724.1| ATP synthase F1, beta subunit [Pseudomonas chlororaphis O6]
gi|388555479|gb|EIM18722.1| ATP synthase F1, beta subunit [Pseudomonas chlororaphis O6]
Length = 458
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V +TG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVNNTGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWGIHRPAPTFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G EHY+ A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGTEHYETARGVQYVLQRYKELKD 371
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 141/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLDVNNTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERWGIHRPAPTFAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 QGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 346 NVIGTEHYETARG----VQYVLQRYKELK 370
>gi|399006509|ref|ZP_10709033.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM17]
gi|398122026|gb|EJM11633.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM17]
Length = 458
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V +TG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVNNTGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G EHY+ A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGNEHYETARGVQYVLQRYKELKD 371
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 141/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLDVNNTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERWGIHRPAPSFAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 QGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 346 NVIGNEHYETARG----VQYVLQRYKELK 370
>gi|394990101|ref|ZP_10382933.1| ATP synthase F1 subunit beta [Sulfuricella denitrificans skB26]
gi|393790366|dbj|GAB72572.1| ATP synthase F1 subunit beta [Sulfuricella denitrificans skB26]
Length = 458
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G T+G++R V +TG PI PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGTTDGLRRGMEVSNTGAPISVPVGTKTLGRIMDVLGNPIDELGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++ IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGNEHSWAIHRKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA+EH G SVF GVGER+REGNDFYHEMKE VLDKVSL+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAVEHSGYSVFAGVGERTREGNDFYHEMKEGGVLDKVSLVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVLLF+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQE
Sbjct: 220 LTGLTMAEFFRDEGRDVLLFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSRQ+AELGIYPA+DPL+S
Sbjct: 280 RITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQVAELGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY VA V+ LQ+YKEL+D
Sbjct: 340 SRQLDPLVVGEEHYNVARGVQSTLQRYKELRD 371
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 135/327 (41%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG + LGRI++ G ID ++ + + AP +
Sbjct: 60 GLRRGMEVSNTGAPISVPVGTKTLGRIMDVLGNPIDELGPIGNEHSWAIHRKAPAFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 120 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K +D +V + + TG T+ E+FRD G+D L+
Sbjct: 180 ERTREGNDFYHEMKEGGVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLLF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P + + RL ER I +
Sbjct: 240 VDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKK 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 287 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQVAELGIYPAVDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + + ++ L +Y+EL
Sbjct: 347 VVGEEHYNVARG----VQSTLQRYKEL 369
>gi|53728944|ref|ZP_00134548.2| COG0055: F0F1-type ATP synthase, beta subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209110|ref|YP_001054335.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|190150977|ref|YP_001969502.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|303249889|ref|ZP_07336091.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307246571|ref|ZP_07528642.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307250941|ref|ZP_07532867.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|307255556|ref|ZP_07537361.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307260007|ref|ZP_07541719.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|307262135|ref|ZP_07543786.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|322513163|ref|ZP_08066294.1| ATP synthase F1 sector beta subunit [Actinobacillus ureae ATCC
25976]
gi|407693450|ref|YP_006818239.1| F0F1 ATP synthase subunit beta [Actinobacillus suis H91-0380]
gi|166201686|sp|A3N2U4.1|ATPB_ACTP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226739968|sp|B3H2P3.1|ATPB_ACTP7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|126097902|gb|ABN74730.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|189916108|gb|ACE62360.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|302650952|gb|EFL81106.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306852443|gb|EFM84677.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306856969|gb|EFM89099.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306861405|gb|EFM93394.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306865843|gb|EFM97719.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306868112|gb|EFM99937.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|322121059|gb|EFX92883.1| ATP synthase F1 sector beta subunit [Actinobacillus ureae ATCC
25976]
gi|407389507|gb|AFU20000.1| F0F1 ATP synthase subunit beta [Actinobacillus suis H91-0380]
Length = 457
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/356 (68%), Positives = 293/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +TG PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGLVRCIALGTSDGLKRGLKVENTGNPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID KG I + + IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEKGPIGEEARWDIHRAAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKD 370
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID K + R + + AP ++
Sbjct: 59 GLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEKGPIGEEARWDIHRAAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G L +Y+EL+
Sbjct: 346 VVGEEHYNVARGVQG----TLQRYKELK 369
>gi|416049455|ref|ZP_11576596.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|347991458|gb|EGY32923.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
Length = 457
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 294/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + ++ +++ +VQQQ+G +VR IA G ++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALKVETGLTL-EVQQQLGSGVVRCIALGASDGLKRGLKVENTNDPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEQGPIGEEERWSIHRSAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNVARGVQGILQRYKELKD 370
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 146/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID + + R ++ + AP ++
Sbjct: 59 GLKRGLKVENTNDPIQVPVGTKTLGRIMNVLGEPIDEQGPIGEEERWSIHRSAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYNVARGVQG----ILQRYKELK 369
>gi|303252037|ref|ZP_07338207.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248695|ref|ZP_07530708.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|302649101|gb|EFL79287.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306854622|gb|EFM86812.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
Length = 457
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/356 (68%), Positives = 294/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR+ V +TG PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGLVRCIALGTSDGLKRSLKVENTGNPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID KG I + + IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEKGPIGEEARWNIHRAAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKD 370
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L + K T ++PVG + LGRI+N GE ID K + R + + AP ++
Sbjct: 59 GLKRSLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEKGPIGEEARWNIHRAAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G L +Y+EL+
Sbjct: 346 VVGEEHYNVARGVQG----TLQRYKELK 369
>gi|342904726|ref|ZP_08726524.1| ATP synthase subunit beta [Haemophilus haemolyticus M21621]
gi|341952603|gb|EGT79126.1| ATP synthase subunit beta [Haemophilus haemolyticus M21621]
Length = 457
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 295/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + +N++ +++ +VQQQ+G +VR IA G ++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALNVETGLTL-EVQQQLGGGVVRCIALGASDGLKRGLKVENTNDPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEQGPIGEEERWAIHRSAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY +A V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDIARGVQGILQRYKELKD 370
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID + + R + + AP ++
Sbjct: 59 GLKRGLKVENTNDPIQVPVGTKTLGRIMNVLGEPIDEQGPIGEEERWAIHRSAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y I + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDIARGVQG----ILQRYKELK 369
>gi|148827675|ref|YP_001292428.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittGG]
gi|166201710|sp|A5UGY9.1|ATPB_HAEIG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|148718917|gb|ABR00045.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittGG]
Length = 457
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 295/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGTSDGLKRGLKVENTNNPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIVNVLGEPIDEQGAIGEEERWAIHRSAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKD 370
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRIVN GE ID + + R + + AP ++
Sbjct: 59 GLKRGLKVENTNNPIQVPVGTKTLGRIVNVLGEPIDEQGAIGEEERWAIHRSAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|258544333|ref|ZP_05704567.1| F-ATPase subunit alpha [Cardiobacterium hominis ATCC 15826]
gi|258520413|gb|EEV89272.1| F-ATPase subunit alpha [Cardiobacterium hominis ATCC 15826]
Length = 513
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 233/402 (57%), Positives = 313/402 (77%), Gaps = 2/402 (0%)
Query: 169 VLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIA 228
V++ + +L++G K CT +I E+PVG ELLGR+VN+ G+ ID K +EKIA
Sbjct: 74 VILGEYDHLSEGDKVTCTGRILEVPVGRELLGRVVNALGQPIDGKGDIKTSESSPIEKIA 133
Query: 229 PGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC 288
PG+++R+SV++PL TG+KSIDSM+PIG+GQRELIIGDRQTGKT IA+D IINQ++ V C
Sbjct: 134 PGVIERQSVDQPLQTGLKSIDSMVPIGRGQRELIIGDRQTGKTAIAVDAIINQRDTGVKC 193
Query: 289 IYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLG 348
IYV IGQK SS+ V+ KL+ ++ + +T++VAATA+DSAA QYI+PY GC +GEYFRD G
Sbjct: 194 IYVAIGQKASSIAAVVRKLEEHDALKHTIIVAATASDSAAMQYIAPYAGCAMGEYFRDRG 253
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK-- 406
+D LI+YDDLTK AWAYRQ+SLLL+RPPGREA+PGDVFYLHSRLLER+S+IN +E+
Sbjct: 254 EDALIVYDDLTKQAWAYRQVSLLLKRPPGREAYPGDVFYLHSRLLERASRINADEVERLT 313
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
K G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN GLS
Sbjct: 314 KGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGLS 373
Query: 467 VSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMKQ 526
VSRVGGAAQ K++KKL G +R+ LAQYREL +F++F+SDLD T+ QL G++++ LMKQ
Sbjct: 374 VSRVGGAAQTKVIKKLGGGVRLALAQYRELAAFAQFASDLDEATRKQLERGQRVTELMKQ 433
Query: 527 KPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
+ S+ E+ + L +N + +IP+++I+ +E +++Y
Sbjct: 434 RQFAPMSVAEMAVSLFAAENGYLDEIPVEKIQAYEHALMQYM 475
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 154/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G + + V TG+ + PVG LGR++N LG PID KG+I + + SPI
Sbjct: 71 VGVVILGEYDHLSEGDKVTCTGRILEVPVGRELLGRVVNALGQPIDGKGDIKTSESSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TG+K ID + P +G + + G GKT ++ I N
Sbjct: 131 KIAPGVIERQSVDQPLQTGLKSIDSMVPIGRGQRELIIGDRQTGKTAIAVDAIINQRDTG 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ +++E + L ++ ++ + + G ++ E F
Sbjct: 191 VKC-IYVAIGQKASSIAAVVRKLEEHDALKHTIIVAATASDSAAMQYIAPYAGCAMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTL---------------AEEM 815
R+ G+D L+ D++ + A +VS +L R P Y + A+E+
Sbjct: 250 RDRGEDALIVYDDLTKQAWAYRQVSLLLKRPPGREAYPGDVFYLHSRLLERASRINADEV 309
Query: 816 GKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
+L + K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 310 ERLTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G KV + V+ L +Y+EL
Sbjct: 370 AGLSVSR-----VGGAAQTKVIKKLGGGVRLALAQYREL 403
>gi|70733499|ref|YP_263274.1| ATP synthase F0F1 subunit beta [Pseudomonas protegens Pf-5]
gi|118573723|sp|Q4K3A9.1|ATPB_PSEF5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|68347798|gb|AAY95404.1| ATP synthase F1, beta subunit [Pseudomonas protegens Pf-5]
Length = 458
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V +TG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVNNTGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G EHY+ A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGNEHYETARGVQYVLQRYKELKD 371
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 141/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLDVNNTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERWGIHRPAPSFAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 QGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 346 NVIGNEHYETARG----VQYVLQRYKELK 370
>gi|223041784|ref|ZP_03611975.1| FOF1 ATP synthase subunit beta [Actinobacillus minor 202]
gi|240950011|ref|ZP_04754319.1| F0F1 ATP synthase subunit beta [Actinobacillus minor NM305]
gi|223017410|gb|EEF15830.1| FOF1 ATP synthase subunit beta [Actinobacillus minor 202]
gi|240295489|gb|EER46232.1| F0F1 ATP synthase subunit beta [Actinobacillus minor NM305]
Length = 457
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/356 (68%), Positives = 293/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + ++ +++ +VQQQ+G +VR IA G ++G+KR V +TG PI
Sbjct: 16 VEFPQDAVPKVYDALKVETGLTL-EVQQQLGGGLVRCIALGTSDGLKRGLKVENTGNPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID KG I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTQTLGRIMNVLGEPIDEKGPIGEEERWDIHRAAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKD 370
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID K + R + + AP ++
Sbjct: 59 GLKRGLKVENTGNPIQVPVGTQTLGRIMNVLGEPIDEKGPIGEEERWDIHRAAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G L +Y+EL+
Sbjct: 346 VVGEEHYNVARGVQG----TLQRYKELK 369
>gi|15600747|ref|NP_254241.1| ATP synthase F0F1 subunit beta [Pseudomonas aeruginosa PAO1]
gi|107104656|ref|ZP_01368574.1| hypothetical protein PaerPA_01005735 [Pseudomonas aeruginosa PACS2]
gi|116053705|ref|YP_794032.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa UCBPP-PA14]
gi|152987192|ref|YP_001351667.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa PA7]
gi|218894657|ref|YP_002443527.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa LESB58]
gi|296392421|ref|ZP_06881896.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa PAb1]
gi|313111495|ref|ZP_07797296.1| ATP synthase beta chain [Pseudomonas aeruginosa 39016]
gi|355650935|ref|ZP_09056363.1| ATP synthase subunit beta [Pseudomonas sp. 2_1_26]
gi|386061739|ref|YP_005978261.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa M18]
gi|386069226|ref|YP_005984530.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa NCGM2.S1]
gi|392987278|ref|YP_006485865.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa DK2]
gi|416856634|ref|ZP_11912198.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa 138244]
gi|416873264|ref|ZP_11917372.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa 152504]
gi|418587900|ref|ZP_13151921.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa MPAO1/P1]
gi|418591593|ref|ZP_13155489.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa MPAO1/P2]
gi|419757357|ref|ZP_14283700.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa PADK2_CF510]
gi|420142727|ref|ZP_14650313.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa CIG1]
gi|421153082|ref|ZP_15612644.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa ATCC 14886]
gi|421164106|ref|ZP_15622761.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa ATCC 25324]
gi|421171569|ref|ZP_15629424.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa ATCC 700888]
gi|421177817|ref|ZP_15635462.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa CI27]
gi|421183680|ref|ZP_15641129.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa E2]
gi|421520127|ref|ZP_15966798.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa PAO579]
gi|424943639|ref|ZP_18359402.1| ATP synthase beta chain [Pseudomonas aeruginosa NCMG1179]
gi|451983672|ref|ZP_21931948.1| ATP synthase beta chain [Pseudomonas aeruginosa 18A]
gi|81539357|sp|Q9HT20.1|ATPB_PSEAE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|122256275|sp|Q02DF4.1|ATPB_PSEAB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|166990372|sp|A6VF32.1|ATPB_PSEA7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740662|sp|B7V791.1|ATPB_PSEA8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|9951894|gb|AAG08939.1|AE004967_10 ATP synthase beta chain [Pseudomonas aeruginosa PAO1]
gi|115588926|gb|ABJ14941.1| ATP synthase beta chain [Pseudomonas aeruginosa UCBPP-PA14]
gi|150962350|gb|ABR84375.1| ATP synthase F1, beta subunit [Pseudomonas aeruginosa PA7]
gi|218774886|emb|CAW30704.1| ATP synthase beta chain [Pseudomonas aeruginosa LESB58]
gi|310883798|gb|EFQ42392.1| ATP synthase beta chain [Pseudomonas aeruginosa 39016]
gi|334841622|gb|EGM20247.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa 138244]
gi|334845235|gb|EGM23801.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa 152504]
gi|346060085|dbj|GAA19968.1| ATP synthase beta chain [Pseudomonas aeruginosa NCMG1179]
gi|347308045|gb|AEO78159.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa M18]
gi|348037785|dbj|BAK93145.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa NCGM2.S1]
gi|354826459|gb|EHF10671.1| ATP synthase subunit beta [Pseudomonas sp. 2_1_26]
gi|375041412|gb|EHS34113.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa MPAO1/P1]
gi|375049652|gb|EHS42143.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa MPAO1/P2]
gi|384396156|gb|EIE42576.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa PADK2_CF510]
gi|392322783|gb|AFM68163.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa DK2]
gi|403244503|gb|EJY58373.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa CIG1]
gi|404346046|gb|EJZ72398.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa PAO579]
gi|404519770|gb|EKA30488.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa ATCC 700888]
gi|404524366|gb|EKA34715.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa ATCC 14886]
gi|404526069|gb|EKA36304.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa ATCC 25324]
gi|404528679|gb|EKA38742.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa CI27]
gi|404539774|gb|EKA49221.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa E2]
gi|451758618|emb|CCQ84471.1| ATP synthase beta chain [Pseudomonas aeruginosa 18A]
gi|453044730|gb|EME92452.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa PA21_ST175]
Length = 458
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VR+IA G+T G+KR V TG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRSIAMGSTEGLKRGLNVDSTGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P +++Q N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWGIHREAPSYADQAGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G++HY A V++ LQ+YKELKD
Sbjct: 340 SRQLDPLVIGQDHYDTARGVQYVLQRYKELKD 371
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 144/336 (42%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
++ + + L +G T +PVG LGRI++ G ID + R + +
Sbjct: 52 SIAMGSTEGLKRGLNVDSTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERWGIHRE 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP D+ NE L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 112 APSYADQAGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 171
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++K N +D +V + + TG T+ E FRD
Sbjct: 172 YSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRD 231
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L+ D++ ++ A ++S LL R P + L E + +
Sbjct: 232 EGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------Q 278
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L ++ + PA++ S
Sbjct: 279 ERITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDS 338
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y + ++ +L +Y+EL+
Sbjct: 339 TSRQLDPLVIGQDHYDTARG----VQYVLQRYKELK 370
>gi|359453231|ref|ZP_09242554.1| F-type H+-transporting ATPase subunit beta [Pseudoalteromonas sp.
BSi20495]
gi|414071450|ref|ZP_11407419.1| F-type H+-transporting ATPase subunit beta [Pseudoalteromonas sp.
Bsw20308]
gi|358049730|dbj|GAA78803.1| F-type H+-transporting ATPase subunit beta [Pseudoalteromonas sp.
BSi20495]
gi|410806170|gb|EKS12167.1| F-type H+-transporting ATPase subunit beta [Pseudoalteromonas sp.
Bsw20308]
Length = 461
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G T+G++R+ +V++TG+ I PVG TLGRI+NVLG+PID G
Sbjct: 43 EVQQQLGGGVVRTIAMGTTDGLRRSALVMNTGESIQVPVGKATLGRIMNVLGEPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + + IH P + Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEDRMSIHRAAPSYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RIASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSS 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPQVIGQEHYDTARGVQTVLQRYKELKD 374
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 140/318 (44%), Gaps = 23/318 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T + ++PVG LGRI+N GE ID ++R ++ + AP ++ S E L TGI
Sbjct: 73 TGESIQVPVGKATLGRIMNVLGEPIDEAGPIGEEDRMSIHRAAPSYEEQSSSVELLETGI 132
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID + P KG + + G GKT ++ I N + ++ +G++ +
Sbjct: 133 KVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFY 192
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
+++ N +D +V + + TG T+ E FRD G+D L D++ ++ A
Sbjct: 193 HEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLA 252
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P + L E + +++I + G++T+ +
Sbjct: 253 GTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERIASTKTGSITSIQAVY 299
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P + D + L ++ + PA++ S SR V G Y
Sbjct: 300 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDPQVIGQEHYDTA 359
Query: 480 KKLSGDIRIMLAQYRELE 497
+ ++ +L +Y+EL+
Sbjct: 360 RG----VQTVLQRYKELK 373
>gi|359443097|ref|ZP_09232946.1| F-type H+-transporting ATPase subunit beta [Pseudoalteromonas sp.
BSi20429]
gi|392535913|ref|ZP_10283050.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas arctica A 37-1-2]
gi|358035049|dbj|GAA69195.1| F-type H+-transporting ATPase subunit beta [Pseudoalteromonas sp.
BSi20429]
Length = 461
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G T+G++R+ +V++TG+ I PVG TLGRI+NVLG+PID G
Sbjct: 43 EVQQQLGGGVVRTIAMGTTDGLRRSALVMNTGESIQVPVGKATLGRIMNVLGEPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + + IH P + Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEDRMSIHRAAPSYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RIASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSS 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPQVIGQEHYDTARGVQTVLQRYKELKD 374
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 140/318 (44%), Gaps = 23/318 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T + ++PVG LGRI+N GE ID ++R ++ + AP ++ S E L TGI
Sbjct: 73 TGESIQVPVGKATLGRIMNVLGEPIDEAGPIGEEDRMSIHRAAPSYEEQSSSVELLETGI 132
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID + P KG + + G GKT ++ I N + ++ +G++ +
Sbjct: 133 KVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFY 192
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
+++ N +D +V + + TG T+ E FRD G+D L D++ ++ A
Sbjct: 193 HEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLA 252
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P + L E + +++I + G++T+ +
Sbjct: 253 GTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERIASTKTGSITSIQAVY 299
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P + D + L ++ + PA++ S SR V G Y
Sbjct: 300 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDPQVIGQEHYDTA 359
Query: 480 KKLSGDIRIMLAQYRELE 497
+ ++ +L +Y+EL+
Sbjct: 360 RG----VQTVLQRYKELK 373
>gi|387120966|ref|YP_006286849.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|415756794|ref|ZP_11481154.1| ATP synthase F1, beta subunit [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|429734212|ref|ZP_19268248.1| ATP synthase F1, beta subunit [Aggregatibacter
actinomycetemcomitans Y4]
gi|348655662|gb|EGY71104.1| ATP synthase F1, beta subunit [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|385875458|gb|AFI87017.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|429152976|gb|EKX95775.1| ATP synthase F1, beta subunit [Aggregatibacter
actinomycetemcomitans Y4]
Length = 457
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 294/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + ++ +++ +VQQQ+G +VR IA G ++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALKVETGLTL-EVQQQLGSGVVRCIALGASDGLKRGLKVENTNDPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEQGPIGEEERWSIHRSAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRIPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNVARGVQGILQRYKELKD 370
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 146/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID + + R ++ + AP ++
Sbjct: 59 GLKRGLKVENTNDPIQVPVGTKTLGRIMNVLGEPIDEQGPIGEEERWSIHRSAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGR------IPSAVGY-QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYNVARGVQG----ILQRYKELK 369
>gi|21672302|ref|NP_660369.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|4033705|sp|Q07232.2|ATPB_BUCAP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|2827018|gb|AAC38110.1| ATP synthase subunit beta [Buchnera aphidicola]
gi|21622900|gb|AAM67580.1| ATP synthase beta chain [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 466
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 256/363 (70%), Positives = 294/363 (80%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNN--ISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + ++ K + + +KN I +VQQQ+G IVRTIA G+TNG+KR IV+D G
Sbjct: 17 VEFDQNSVPKIYNALEVKNKKIQLILEVQQQLGAGIVRTIAMGSTNGLKRGLIVIDLGHY 76
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEI----NSK-KKSPIHTLPPKFSNQIFNNNILETG 669
I PVG TLGRI+NVLG IDNKG + NSK + IH P + Q + ILETG
Sbjct: 77 IKVPVGQATLGRIINVLGKTIDNKGPLKNLDNSKLEYWEIHRSAPSYQEQASSQEILETG 136
Query: 670 IKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDF 729
IKVIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDF
Sbjct: 137 IKVIDLICPFSKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFTGVGERTREGNDF 196
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
YHEMK+S VLDKVSL+YGQMNEP GNRLRVA TGL+IAE+FR+ G+DVLLFIDNIYR+TL
Sbjct: 197 YHEMKDSKVLDKVSLVYGQMNEPPGNRLRVAFTGLTIAEKFRDEGRDVLLFIDNIYRYTL 256
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+
Sbjct: 257 AGTEVSALLGRMPSAVGYQPTLAEEMGLLQERITSTKEGSITSVQAVYVPADDLTDPSPA 316
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLDST+ LSRQIA LGIYPAIDPL S S+QLDPYIVG+EHY A V+ LQ+Y+E
Sbjct: 317 TTFAHLDSTVTLSRQIAALGIYPAIDPLNSTSRQLDPYIVGDEHYDTARGVQSILQRYQE 376
Query: 910 LKD 912
LKD
Sbjct: 377 LKD 379
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 141/320 (44%), Gaps = 32/320 (10%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRET-------VEKIAPGIMDRESVNEPLLT 243
++PVG LGRI+N G+ IDNK +KN + + + AP ++ S E L T
Sbjct: 78 KVPVGQATLGRIINVLGKTIDNKGP--LKNLDNSKLEYWEIHRSAPSYQEQASSQEILET 135
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N + ++ +G++ +
Sbjct: 136 GIKVIDLICPFSKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFTGVGERTREGND 195
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHA 362
+++K +D +V + + +TG TI E FRD G+D L+ D++ ++
Sbjct: 196 FYHEMKDSKVLDKVSLVYGQMNEPPGNRLRVAFTGLTIAEKFRDEGRDVLLFIDNIYRYT 255
Query: 363 WAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPI 422
A ++S LL R P + + + + L +++I + G++T+
Sbjct: 256 LAGTEVSALLGRMPSAVGY-------------QPTLAEEMGLLQERITSTKEGSITSVQA 302
Query: 423 IETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYK 477
+ D+T P + D + L + PAI+ S SR + G Y
Sbjct: 303 VYVPADDLTDPSPATTFAHLDSTVTLSRQIAALGIYPAIDPLNSTSRQLDPYIVGDEHYD 362
Query: 478 IVKKLSGDIRIMLAQYRELE 497
+ ++ +L +Y+EL+
Sbjct: 363 TAR----GVQSILQRYQELK 378
>gi|425896658|ref|ZP_18873249.1| ATP synthase F1, beta subunit [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397882027|gb|EJK98515.1| ATP synthase F1, beta subunit [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 458
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V +TG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVNNTGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P F+ Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWGIHRPAPTFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G EHY+ A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGNEHYETARGVQYVLQRYKELKD 371
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 141/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLDVNNTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERWGIHRPAPTFAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 QGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 346 NVIGNEHYETARG----VQYVLQRYKELK 370
>gi|332533718|ref|ZP_08409577.1| ATP synthase beta chain [Pseudoalteromonas haloplanktis ANT/505]
gi|332036882|gb|EGI73343.1| ATP synthase beta chain [Pseudoalteromonas haloplanktis ANT/505]
Length = 461
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G T+G++R+ +V++TG+ I PVG TLGRI+NVLG+PID G
Sbjct: 43 EVQQQLGGGVVRTIAMGTTDGLRRSALVMNTGESIQVPVGKATLGRIMNVLGEPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + + IH P + Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEDRMSIHRAAPSYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RIASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSS 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPQVIGQEHYDTARGVQTVLQRYKELKD 374
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 140/318 (44%), Gaps = 23/318 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T + ++PVG LGRI+N GE ID ++R ++ + AP ++ S E L TGI
Sbjct: 73 TGESIQVPVGKATLGRIMNVLGEPIDEAGPIGEEDRMSIHRAAPSYEEQSSSVELLETGI 132
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID + P KG + + G GKT ++ I N + ++ +G++ +
Sbjct: 133 KVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFY 192
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
+++ N +D +V + + TG T+ E FRD G+D L D++ ++ A
Sbjct: 193 HEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLA 252
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P + L E + +++I + G++T+ +
Sbjct: 253 GTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERIASTKTGSITSIQAVY 299
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P + D + L ++ + PA++ S SR V G Y
Sbjct: 300 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDPQVIGQEHYDTA 359
Query: 480 KKLSGDIRIMLAQYRELE 497
+ ++ +L +Y+EL+
Sbjct: 360 RG----VQTVLQRYKELK 373
>gi|33151292|ref|NP_872645.1| ATP synthase F0F1 subunit beta [Haemophilus ducreyi 35000HP]
gi|81836085|sp|Q7VPP0.1|ATPB_HAEDU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|33147512|gb|AAP95034.1| ATP synthase beta chain [Haemophilus ducreyi 35000HP]
Length = 457
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/356 (68%), Positives = 293/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +TG PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGLVRCIALGTSDGLKRGLKVENTGNPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID KG I + + IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEKGPIGEEARWDIHRAAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKD 370
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID K + R + + AP ++
Sbjct: 59 GLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEKGPIGEEARWDIHRAAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G L +Y+EL+
Sbjct: 346 VVGEEHYNVARGVQG----TLQRYKELK 369
>gi|112791402|gb|ABI21971.1| ATP synthase beta subunit, partial [Erwinia persicina]
Length = 421
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G+++G+KR VD PI PVG TLGRI+NVLG+PID KG+
Sbjct: 17 EVQQQLGGGVVRTIAMGSSDGLKRGLETVDLKHPIEVPVGVATLGRIMNVLGEPIDMKGD 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRAAPSYEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA EH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 348
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + E+PVG LGRI+N GE ID K + R + + AP D+
Sbjct: 37 GLKRGLETVDLKHPIEVPVGVATLGRIMNVLGEPIDMKGDIGEEERWAIHRAAPSYEDQS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 217 IDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDTARG----VQSLLQRYQELK 347
>gi|423204682|ref|ZP_17191238.1| ATP synthase subunit beta [Aeromonas veronii AMC34]
gi|404626006|gb|EKB22817.1| ATP synthase subunit beta [Aeromonas veronii AMC34]
Length = 462
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/332 (72%), Positives = 285/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQIG +VR I G+++G++R VV++GK I PVG TLGRI+NVLG+PID KG
Sbjct: 44 EVQQQIGGGVVRCITMGSSDGLRRGLEVVNSGKSIQVPVGTATLGRIMNVLGEPIDEKGP 103
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++ IH P + +Q +N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 104 IGEEECWSIHRAAPSYEDQSNSNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 163
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 164 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMMESNVLDKVSLVYGQMNEPPGNRLRVA 223
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 224 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 283
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 284 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAALGIYPAVDPLDST 343
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY+ A V+ LQ+YKELKD
Sbjct: 344 SRQLDPLVVGKEHYETARGVQTVLQRYKELKD 375
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + K ++PVG LGRI+N GE ID K + ++ + AP D+
Sbjct: 64 GLRRGLEVVNSGKSIQVPVGTATLGRIMNVLGEPIDEKGPIGEEECWSIHRAAPSYEDQS 123
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 124 NSNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 183
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 184 ERTREGNDFYHEMMESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 243
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 244 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 290
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 291 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAALGIYPAVDPLDSTSRQLDPL 350
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 351 VVGKEHYETARG----VQTVLQRYKELK 374
>gi|416035022|ref|ZP_11573448.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|347997561|gb|EGY38545.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
Length = 457
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 294/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + ++ +++ +VQQQ+G +VR IA G ++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALKVETGLTL-EVQQQLGSGVVRCIALGASDGLKRGLKVENTNDPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEQGPIGEEERWSIHRSAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRIPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNVARGVQGILQRYKELKD 370
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 146/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID + + R ++ + AP ++
Sbjct: 59 GLKRGLKVENTNDPIQVPVGTKTLGRIMNVLGEPIDEQGPIGEEERWSIHRSAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGR------IPSAVGY-QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYNVARGVQG----ILQRYKELK 369
>gi|330831705|ref|YP_004394657.1| H(+)-transporting two sector ATPase, F(1) subunit beta [Aeromonas
veronii B565]
gi|406675073|ref|ZP_11082264.1| ATP synthase subunit beta [Aeromonas veronii AMC35]
gi|423202996|ref|ZP_17189574.1| ATP synthase subunit beta [Aeromonas veronii AER39]
gi|423211652|ref|ZP_17198185.1| ATP synthase subunit beta [Aeromonas veronii AER397]
gi|328806841|gb|AEB52040.1| H(+)-transporting two-sector ATPase, F(1) beta subunit [Aeromonas
veronii B565]
gi|404613311|gb|EKB10344.1| ATP synthase subunit beta [Aeromonas veronii AER397]
gi|404614252|gb|EKB11255.1| ATP synthase subunit beta [Aeromonas veronii AER39]
gi|404628211|gb|EKB24997.1| ATP synthase subunit beta [Aeromonas veronii AMC35]
Length = 462
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/332 (72%), Positives = 285/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQIG +VR I G+++G++R VV++GK I PVG TLGRI+NVLG+PID KG
Sbjct: 44 EVQQQIGGGVVRCITMGSSDGLRRGLEVVNSGKSIQVPVGTATLGRIMNVLGEPIDEKGP 103
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++ IH P + +Q +N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 104 IGEEECWSIHRAAPSYEDQSNSNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 163
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 164 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMMESNVLDKVSLVYGQMNEPPGNRLRVA 223
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 224 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 283
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 284 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAALGIYPAVDPLDST 343
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY+ A V+ LQ+YKELKD
Sbjct: 344 SRQLDPLVVGKEHYETARGVQTVLQRYKELKD 375
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + K ++PVG LGRI+N GE ID K + ++ + AP D+
Sbjct: 64 GLRRGLEVVNSGKSIQVPVGTATLGRIMNVLGEPIDEKGPIGEEECWSIHRAAPSYEDQS 123
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 124 NSNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 183
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 184 ERTREGNDFYHEMMESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 243
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 244 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 290
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 291 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAALGIYPAVDPLDSTSRQLDPL 350
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 351 VVGKEHYETAR----GVQTVLQRYKELK 374
>gi|307257728|ref|ZP_07539485.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306863634|gb|EFM95560.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
Length = 467
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/356 (68%), Positives = 294/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR+ V +TG PI
Sbjct: 26 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGLVRCIALGTSDGLKRSLKVENTGNPIQ 84
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID KG I + + IH P + Q + +LETGIKVIDL+
Sbjct: 85 VPVGTKTLGRIMNVLGEPIDEKGPIGEEARWNIHRAAPSYEEQSNSTELLETGIKVIDLI 144
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S
Sbjct: 145 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 204
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 205 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 264
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 324
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 325 STVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKD 380
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 139/313 (44%), Gaps = 23/313 (7%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDS 250
++PVG + LGRI+N GE ID K + R + + AP ++ + E L TGIK ID
Sbjct: 84 QVPVGTKTLGRIMNVLGEPIDEKGPIGEEARWNIHRAAPSYEEQSNSTELLETGIKVIDL 143
Query: 251 MIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKY 309
+ P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 144 ICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTD 203
Query: 310 YNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQIS 369
N +D +V + + TG T+ E FRD G+D L D++ ++ A ++S
Sbjct: 204 SNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVS 263
Query: 370 LLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGD 429
LL R P V Y L E + +++I + G++T+ + D
Sbjct: 264 ALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPADD 310
Query: 430 VTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSG 484
+T P + D + L N+ + PA++ S SR V G Y + + + G
Sbjct: 311 LTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQG 370
Query: 485 DIRIMLAQYRELE 497
L +Y+EL+
Sbjct: 371 ----TLQRYKELK 379
>gi|256823841|ref|YP_003147804.1| ATP synthase F1 subunit beta [Kangiella koreensis DSM 16069]
gi|256797380|gb|ACV28036.1| ATP synthase F1, beta subunit [Kangiella koreensis DSM 16069]
Length = 458
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 291/356 (81%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + +K +VQQQ+G+ +VR IA G ++G++R +TG PI
Sbjct: 16 VEFPRDSVPKVYDALFVKATELTLEVQQQLGDGVVRCIAMGASDGLRRGLEATNTGAPIQ 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG+PID KG I K++ IH PK N +LETGIKVIDL+
Sbjct: 76 VPVGKETLGRIMDVLGEPIDQKGPIGEKERMSIHRKAPKLEELAPANELLETGIKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA
Sbjct: 196 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSRQIAELGIYPA+DPL+S S+QLDP ++G EHY VA V+ LQ+YKELKD
Sbjct: 316 ATVVLSRQIAELGIYPAVDPLDSTSRQLDPLVIGSEHYDVARGVQGVLQRYKELKD 371
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 146/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T ++PVG E LGRI++ GE ID K K R ++ + AP + +
Sbjct: 60 GLRRGLEATNTGAPIQVPVGKETLGRIMDVLGEPIDQKGPIGEKERMSIHRKAPKLEELA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
NE L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 120 PANELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 180 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 240 IDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 287 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G+ Y + + + G +L +Y+EL+
Sbjct: 347 VIGSEHYDVARGVQG----VLQRYKELK 370
>gi|77461947|ref|YP_351454.1| F0F1 ATP synthase subunit beta [Pseudomonas fluorescens Pf0-1]
gi|398976407|ref|ZP_10686313.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM25]
gi|118573725|sp|Q3K441.1|ATPB_PSEPF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|77385950|gb|ABA77463.1| ATP synthase beta chain [Pseudomonas fluorescens Pf0-1]
gi|398139243|gb|EJM28244.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM25]
Length = 458
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V +TG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVNNTGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P F+ Q N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWGIHRAAPSFAEQAGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G +HY+ A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGNDHYETARGVQYVLQRYKELKD 371
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 141/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLDVNNTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERWGIHRAAPSFAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
NE L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 QGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 346 NVIGNDHYETARG----VQYVLQRYKELK 370
>gi|416052556|ref|ZP_11578339.1| ATP synthase F1, beta subunit [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|347991955|gb|EGY33395.1| ATP synthase F1, beta subunit [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
Length = 457
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 295/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + ++ +++ +VQQQ+G +VR IA G ++G+KR+ V +T PI
Sbjct: 16 VEFPQDAVPKVYDALKVETGLTL-EVQQQLGGGVVRCIALGASDGLKRSLKVENTNDPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEQGPIGEEERWSIHRSAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNVARGVQGILQRYKELKD 370
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 145/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L + K T ++PVG + LGRI+N GE ID + + R ++ + AP ++
Sbjct: 59 GLKRSLKVENTNDPIQVPVGTKTLGRIMNVLGEPIDEQGPIGEEERWSIHRSAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYNVARGVQG----ILQRYKELK 369
>gi|429210951|ref|ZP_19202117.1| F0F1 ATP synthase subunit beta [Pseudomonas sp. M1]
gi|428158365|gb|EKX04912.1| F0F1 ATP synthase subunit beta [Pseudomonas sp. M1]
Length = 458
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VR+IA G+T G+KR V TG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRSIAMGSTEGLKRGLNVESTGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P +++Q N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWGIHREAPSYADQAGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G++HY A V++ LQ+YKELKD
Sbjct: 340 SRQLDPLVIGQDHYDTARGVQYILQRYKELKD 371
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 144/336 (42%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
++ + + L +G T +PVG LGRI++ G ID + R + +
Sbjct: 52 SIAMGSTEGLKRGLNVESTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERWGIHRE 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP D+ NE L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 112 APSYADQAGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 171
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++K N +D +V + + TG T+ E FRD
Sbjct: 172 YSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRD 231
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L+ D++ ++ A ++S LL R P + L E + +
Sbjct: 232 EGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------Q 278
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L ++ + PA++ S
Sbjct: 279 ERITSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDS 338
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y + ++ +L +Y+EL+
Sbjct: 339 TSRQLDPLVIGQDHYDTARG----VQYILQRYKELK 370
>gi|307253313|ref|ZP_07535185.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|307264334|ref|ZP_07545922.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|306859177|gb|EFM91218.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306870286|gb|EFN02042.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 467
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/356 (68%), Positives = 293/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +TG PI
Sbjct: 26 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGLVRCIALGTSDGLKRGLKVENTGNPIQ 84
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID KG I + + IH P + Q + +LETGIKVIDL+
Sbjct: 85 VPVGTKTLGRIMNVLGEPIDEKGPIGEEARWDIHRAAPSYEEQSNSTELLETGIKVIDLI 144
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S
Sbjct: 145 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 204
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 205 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 264
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 324
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 325 STVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKD 380
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID K + R + + AP ++
Sbjct: 69 GLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEKGPIGEEARWDIHRAAPSYEEQS 128
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 129 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 188
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 189 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 248
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 249 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 295
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 296 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPL 355
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G L +Y+EL+
Sbjct: 356 VVGEEHYNVARGVQG----TLQRYKELK 379
>gi|34500026|gb|AAQ73595.1| ATP synthase beta subunit [Actinobacillus rossii]
Length = 445
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/332 (72%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G ++G+KR V +TG PI PVG TLGRI+NVLG+PID KGE
Sbjct: 40 EVQQQLGGGVVRCIALGTSDGLKRGLKVNNTGNPISVPVGTKTLGRIMNVLGEPIDQKGE 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGAEENWAIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 340 SRQLDPQVVGQEHYDVARGVQGILQRYKELKD 371
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T +PVG + LGRI+N GE ID K + + + + AP ++
Sbjct: 60 GLKRGLKVNNTGNPISVPVGTKTLGRIMNVLGEPIDQKGEIGAEENWAIHRAAPSYEEQS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 120 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 180 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPQ 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 347 VVGQEHYDVARGVQG----ILQRYKELK 370
>gi|359435246|ref|ZP_09225469.1| F-type H+-transporting ATPase subunit beta [Pseudoalteromonas sp.
BSi20652]
gi|357918147|dbj|GAA61718.1| F-type H+-transporting ATPase subunit beta [Pseudoalteromonas sp.
BSi20652]
Length = 461
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G T+G++R+ +V++TG+ I PVG TLGRI+NVLG+PID G
Sbjct: 43 EVQQQLGGGVVRTIAMGTTDGLRRSALVMNTGESIQVPVGKATLGRIMNVLGEPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + + IH P + Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEDRMSIHRAAPSYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RIASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSS 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPQVIGQEHYDTARGVQTVLQRYKELKD 374
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 140/318 (44%), Gaps = 23/318 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T + ++PVG LGRI+N GE ID ++R ++ + AP ++ S E L TGI
Sbjct: 73 TGESIQVPVGKATLGRIMNVLGEPIDEAGPIGEEDRMSIHRAAPSYEEQSSSVELLETGI 132
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID + P KG + + G GKT ++ I N + ++ +G++ +
Sbjct: 133 KVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFY 192
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
+++ N +D +V + + TG T+ E FRD G+D L D++ ++ A
Sbjct: 193 HEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLA 252
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P + L E + +++I + G++T+ +
Sbjct: 253 GTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERIASTKTGSITSIQAVY 299
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P + D + L ++ + PA++ S SR V G Y
Sbjct: 300 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDPQVIGQEHYDTA 359
Query: 480 KKLSGDIRIMLAQYRELE 497
+ ++ +L +Y+EL+
Sbjct: 360 RG----VQTVLQRYKELK 373
>gi|18033073|gb|AAL56978.1|AF326330_1 ATP synthase [Avibacterium gallinarum]
Length = 431
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 295/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + +N++ + + +VQQQ+G IVR IA G+++G+KR V +T KPI
Sbjct: 5 VEFPQDAVPKVYDALNVETGLVL-EVQQQLGGGIVRCIAMGSSDGLKRGLSVSNTAKPIS 63
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I +++ IH P + +Q + +LETGIKVIDL+
Sbjct: 64 VPVGTKTLGRIMNVLGEPIDEQGPIGAEETWSIHRPAPSYEDQANSTELLETGIKVIDLI 123
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM ES
Sbjct: 124 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTES 183
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 184 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 243
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 244 LLGRMPSAVGYQPTLAEEMGALQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 303
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ ++Y+ELKD
Sbjct: 304 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGTYKRYRELKD 359
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG + LGRI+N GE ID + + ++ + AP D+
Sbjct: 48 GLKRGLSVSNTAKPISVPVGTKTLGRIMNVLGEPIDEQGPIGAEETWSIHRPAPSYEDQA 107
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 108 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 167
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 168 ERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 227
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 228 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGAL------QERITSTKT 274
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 275 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 334
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G + +YREL+
Sbjct: 335 VVGQEHYDVARGVQGTYK----RYRELK 358
>gi|417745612|ref|ZP_12394129.1| ATP synthase F1, beta subunit [Shigella flexneri 2930-71]
gi|332764011|gb|EGJ94248.1| ATP synthase F1, beta subunit [Shigella flexneri 2930-71]
Length = 435
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 17 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTFTHLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFTHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 348
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 37 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 217 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFTHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDTARG----VQSILQRYQELK 347
>gi|417841916|ref|ZP_12488013.1| ATP synthase subunit beta [Haemophilus haemolyticus M19501]
gi|341948152|gb|EGT74786.1| ATP synthase subunit beta [Haemophilus haemolyticus M19501]
Length = 457
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 295/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGASDGLKRGLKVENTNDPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEQGPIGEEERWAIHRSAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKD 370
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID + + R + + AP ++
Sbjct: 59 GLKRGLKVENTNDPIQVPVGTKTLGRIMNVLGEPIDEQGPIGEEERWAIHRSAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|354599793|ref|ZP_09017810.1| ATP synthase subunit beta [Brenneria sp. EniD312]
gi|353677728|gb|EHD23761.1| ATP synthase subunit beta [Brenneria sp. EniD312]
Length = 460
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/358 (67%), Positives = 293/358 (81%), Gaps = 2/358 (0%)
Query: 557 IELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + + K + + ++N + +VQQQ+G +VR IA G+++G++R V + G P
Sbjct: 16 VEFPQDAVPKVYDALEVENGAEKLVLEVQQQLGGGVVRCIAMGSSDGLRRGLKVTNQGHP 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVID 674
I PVG TLGRI+NVLG+P+D KG+I + + IH P + + +LETGIKVID
Sbjct: 76 IEVPVGKATLGRIMNVLGEPVDMKGDIGEEDRWAIHREAPSYEELSSSQELLETGIKVID 135
Query: 675 LLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMK 734
L+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM
Sbjct: 136 LMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMT 195
Query: 735 ESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEV 794
ESNV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEV
Sbjct: 196 ESNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEV 255
Query: 795 SAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTH 854
SA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF H
Sbjct: 256 SALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315
Query: 855 LDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKD 373
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K E+PVG LGRI+N GE +D K ++R + + AP +
Sbjct: 62 GLRRGLKVTNQGHPIEVPVGKATLGRIMNVLGEPVDMKGDIGEEDRWAIHREAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTESNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|237729043|ref|ZP_04559524.1| ATP synthase F1 sector subunit beta [Citrobacter sp. 30_2]
gi|365102330|ref|ZP_09332631.1| ATP synthase subunit beta [Citrobacter freundii 4_7_47CFAA]
gi|395230758|ref|ZP_10409058.1| ATP synthase F1 sector subunit beta [Citrobacter sp. A1]
gi|421846880|ref|ZP_16280024.1| F0F1 ATP synthase subunit beta [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|424729070|ref|ZP_18157673.1| atp synthase subunit beta [Citrobacter sp. L17]
gi|226909665|gb|EEH95583.1| ATP synthase F1 sector subunit beta [Citrobacter sp. 30_2]
gi|363646058|gb|EHL85306.1| ATP synthase subunit beta [Citrobacter freundii 4_7_47CFAA]
gi|394715519|gb|EJF21333.1| ATP synthase F1 sector subunit beta [Citrobacter sp. A1]
gi|411771755|gb|EKS55415.1| F0F1 ATP synthase subunit beta [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|422896178|gb|EKU35961.1| atp synthase subunit beta [Citrobacter sp. L17]
gi|455645326|gb|EMF24386.1| F0F1 ATP synthase subunit beta [Citrobacter freundii GTC 09479]
Length = 460
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/345 (69%), Positives = 288/345 (83%), Gaps = 1/345 (0%)
Query: 568 FRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRI 627
++N K ++ + +VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI
Sbjct: 30 LEVMNGKESLVL-EVQQQLGGGIVRTIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGRI 88
Query: 628 LNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGL 687
+NVLG PID KG+I +++ IH P + + +LETGIKVIDL+CPF KGGK+GL
Sbjct: 89 MNVLGHPIDMKGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGL 148
Query: 688 FGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYG 747
FGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YG
Sbjct: 149 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 208
Query: 748 QMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY 807
QMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGY
Sbjct: 209 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGY 268
Query: 808 QPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAE 867
QPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA
Sbjct: 269 QPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAS 328
Query: 868 LGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LGIYPA+DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 329 LGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 373
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + E E+PVG LGRI+N G ID K + R + + AP +
Sbjct: 62 GLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGHPIDMKGDIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSLLQRYQELK 372
>gi|440289804|ref|YP_007342569.1| ATP synthase F1 subcomplex beta subunit [Enterobacteriaceae
bacterium strain FGI 57]
gi|440049326|gb|AGB80384.1| ATP synthase F1 subcomplex beta subunit [Enterobacteriaceae
bacterium strain FGI 57]
Length = 460
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/338 (70%), Positives = 284/338 (84%)
Query: 575 NNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDP 634
N + + +VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG P
Sbjct: 36 NEVLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGQP 95
Query: 635 IDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVG 694
+D KG+I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVG
Sbjct: 96 VDMKGDIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVG 155
Query: 695 KTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSG 754
KTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNV+DKVSL+YGQMNEP G
Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVIDKVSLVYGQMNEPPG 215
Query: 755 NRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
NRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 216 NRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 275
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+
Sbjct: 276 MGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAV 335
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 336 DPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 140/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N G+ +D K + R + + AP +
Sbjct: 62 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGQPVDMKGDIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTESNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|145301172|ref|YP_001144013.1| F0F1 ATP synthase subunit beta [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418362562|ref|ZP_12963192.1| F0F1 ATP synthase subunit beta [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|166201688|sp|A4STP3.1|ATPB_AERS4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|142853944|gb|ABO92265.1| F0F1 ATP synthase subunit beta [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356686255|gb|EHI50862.1| F0F1 ATP synthase subunit beta [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 462
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQIG +VR I G+++G++R V+++GK I PVG TLGRI+NVLG+PID KG
Sbjct: 44 EVQQQIGGGVVRCITMGSSDGLRRGLEVMNSGKSIQVPVGVSTLGRIMNVLGEPIDEKGP 103
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q +N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 104 IGEEERWSIHRAAPSYEDQSNSNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 163
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 164 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMMESNVLDKVSLVYGQMNEPPGNRLRVA 223
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 224 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 283
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+ST+ G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 284 RITSTRTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAALGIYPAVDPLDST 343
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY+ A V+ LQ+YKELKD
Sbjct: 344 SRQLDPLVVGKEHYETARGVQTVLQRYKELKD 375
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + K ++PVG LGRI+N GE ID K + R ++ + AP D+
Sbjct: 64 GLRRGLEVMNSGKSIQVPVGVSTLGRIMNVLGEPIDEKGPIGEEERWSIHRAAPSYEDQS 123
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ N+ L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 124 NSNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 183
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 184 ERTREGNDFYHEMMESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 243
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 244 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTRT 290
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 291 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAALGIYPAVDPLDSTSRQLDPL 350
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 351 VVGKEHYETARG----VQTVLQRYKELK 374
>gi|283836156|ref|ZP_06355897.1| hypothetical protein CIT292_10581 [Citrobacter youngae ATCC 29220]
gi|291068349|gb|EFE06458.1| ATP synthase F1, beta subunit [Citrobacter youngae ATCC 29220]
Length = 460
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/345 (69%), Positives = 288/345 (83%), Gaps = 1/345 (0%)
Query: 568 FRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRI 627
++N K ++ + +VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI
Sbjct: 30 LEVMNGKESLVL-EVQQQLGGGIVRTIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGRI 88
Query: 628 LNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGL 687
+NVLG PID KG+I +++ IH P + + +LETGIKVIDL+CPF KGGK+GL
Sbjct: 89 MNVLGHPIDMKGDIGEEERWAIHRAAPTYEELSSSQELLETGIKVIDLMCPFAKGGKVGL 148
Query: 688 FGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYG 747
FGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YG
Sbjct: 149 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 208
Query: 748 QMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY 807
QMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGY
Sbjct: 209 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGY 268
Query: 808 QPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAE 867
QPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA
Sbjct: 269 QPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAS 328
Query: 868 LGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LGIYPA+DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 329 LGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 373
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + E E+PVG LGRI+N G ID K + R + + AP +
Sbjct: 62 GLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGHPIDMKGDIGEEERWAIHRAAPTYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSLLQRYQELK 372
>gi|261867032|ref|YP_003254954.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|365966839|ref|YP_004948401.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|415768717|ref|ZP_11483906.1| ATP synthase F1, beta subunit [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|416071782|ref|ZP_11583941.1| ATP synthase F1, beta subunit [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|416077487|ref|ZP_11585925.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|416086948|ref|ZP_11587579.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|418464538|ref|ZP_13035477.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|444344148|ref|ZP_21152446.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|444347939|ref|ZP_21155724.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|261412364|gb|ACX81735.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|347998413|gb|EGY39342.1| ATP synthase F1, beta subunit [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348003974|gb|EGY44515.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|348009768|gb|EGY49879.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|348657751|gb|EGY75334.1| ATP synthase F1, beta subunit [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|359756493|gb|EHK90650.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|365745752|gb|AEW76657.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|443544697|gb|ELT54639.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|443547921|gb|ELT57319.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 457
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 294/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + ++ +++ +VQQQ+G +VR IA G ++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALKVETGLTL-EVQQQLGGGVVRCIALGASDGLKRGLKVENTNDPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEQGPIGEEERWSIHRSAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNVARGVQGILQRYKELKD 370
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 146/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID + + R ++ + AP ++
Sbjct: 59 GLKRGLKVENTNDPIQVPVGTKTLGRIMNVLGEPIDEQGPIGEEERWSIHRSAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYNVARGVQG----ILQRYKELK 369
>gi|156936112|ref|YP_001440028.1| F0F1 ATP synthase subunit beta [Cronobacter sakazakii ATCC BAA-894]
gi|389842907|ref|YP_006344991.1| F0F1 ATP synthase subunit beta [Cronobacter sakazakii ES15]
gi|417790384|ref|ZP_12437940.1| F0F1 ATP synthase subunit beta [Cronobacter sakazakii E899]
gi|429094894|ref|ZP_19157406.1| ATP synthase beta chain [Cronobacter dublinensis 1210]
gi|429098746|ref|ZP_19160852.1| ATP synthase beta chain [Cronobacter dublinensis 582]
gi|429106876|ref|ZP_19168745.1| ATP synthase beta chain [Cronobacter malonaticus 681]
gi|449310209|ref|YP_007442565.1| F0F1 ATP synthase subunit beta [Cronobacter sakazakii SP291]
gi|166201702|sp|A7MMW9.1|ATPB_ENTS8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|156534366|gb|ABU79192.1| hypothetical protein ESA_04006 [Cronobacter sakazakii ATCC BAA-894]
gi|333955510|gb|EGL73257.1| F0F1 ATP synthase subunit beta [Cronobacter sakazakii E899]
gi|387853383|gb|AFK01481.1| F0F1 ATP synthase subunit beta [Cronobacter sakazakii ES15]
gi|426285086|emb|CCJ86965.1| ATP synthase beta chain [Cronobacter dublinensis 582]
gi|426293599|emb|CCJ94858.1| ATP synthase beta chain [Cronobacter malonaticus 681]
gi|426739990|emb|CCJ83519.1| ATP synthase beta chain [Cronobacter dublinensis 1210]
gi|449100242|gb|AGE88276.1| F0F1 ATP synthase subunit beta [Cronobacter sakazakii SP291]
Length = 460
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG PID KG+
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLPVADLEHPIEVPVGKATLGRIMNVLGQPIDMKGD 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 62 GLRRGLPVADLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|416107103|ref|ZP_11590248.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|444347103|ref|ZP_21155052.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|348005810|gb|EGY46282.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|443540937|gb|ELT51447.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
Length = 457
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 294/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + ++ +++ +VQQQ+G +VR IA G ++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALKVETGLTL-EVQQQLGGGVVRCIALGASDGLKRGLKVENTNDPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTRTLGRIMNVLGEPIDEQGPIGEEERWSIHRSAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNVARGVQGILQRYKELKD 370
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 145/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG LGRI+N GE ID + + R ++ + AP ++
Sbjct: 59 GLKRGLKVENTNDPIQVPVGTRTLGRIMNVLGEPIDEQGPIGEEERWSIHRSAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYNVARGVQG----ILQRYKELK 369
>gi|429084767|ref|ZP_19147759.1| ATP synthase beta chain [Cronobacter condimenti 1330]
gi|426546154|emb|CCJ73800.1| ATP synthase beta chain [Cronobacter condimenti 1330]
Length = 460
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG PID KG+
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLPVADLEHPIEVPVGKATLGRIMNVLGQPIDMKGD 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 62 GLRRGLPVADLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|420367702|ref|ZP_14868479.1| ATP synthase F1, beta subunit [Shigella flexneri 1235-66]
gi|391322924|gb|EIQ79595.1| ATP synthase F1, beta subunit [Shigella flexneri 1235-66]
Length = 460
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/345 (69%), Positives = 288/345 (83%), Gaps = 1/345 (0%)
Query: 568 FRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRI 627
++N K ++ + +VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI
Sbjct: 30 LEVMNGKESLVL-EVQQQLGGGIVRTIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGRI 88
Query: 628 LNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGL 687
+NVLG PID KG+I +++ IH P + + +LETGIKVIDL+CPF KGGK+GL
Sbjct: 89 MNVLGHPIDMKGDIGEEERWAIHRAAPTYEELSSSQELLETGIKVIDLMCPFAKGGKVGL 148
Query: 688 FGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYG 747
FGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YG
Sbjct: 149 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 208
Query: 748 QMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY 807
QMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGY
Sbjct: 209 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGY 268
Query: 808 QPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAE 867
QPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA
Sbjct: 269 QPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAS 328
Query: 868 LGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LGIYPA+DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 329 LGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 373
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + E E+PVG LGRI+N G ID K + R + + AP +
Sbjct: 62 GLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGHPIDMKGDIGEEERWAIHRAAPTYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSLLQRYQELK 372
>gi|383815576|ref|ZP_09970987.1| F0F1 ATP synthase subunit beta [Serratia sp. M24T3]
gi|383295608|gb|EIC83931.1| F0F1 ATP synthase subunit beta [Serratia sp. M24T3]
Length = 460
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/358 (67%), Positives = 293/358 (81%), Gaps = 2/358 (0%)
Query: 557 IELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + + K + + ++N S + +VQQQIG +VR IA G ++G++R V D P
Sbjct: 16 VEFPQDAVPKVYTALEVENGTSKLVLEVQQQIGGGVVRCIAMGTSDGLRRGLKVNDLQHP 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVID 674
I PVG TLGRI+NVLG+PID KGEI +++ IH P + + +LETGIKV+D
Sbjct: 76 IEVPVGTATLGRIMNVLGEPIDMKGEIGEEERRGIHRAAPSYEELANSQELLETGIKVMD 135
Query: 675 LLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMK 734
L+CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM
Sbjct: 136 LMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMT 195
Query: 735 ESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEV 794
+SNV+DKV+L+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEV
Sbjct: 196 DSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEV 255
Query: 795 SAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTH 854
SA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITSVQA+YVPADDLTDPSP+TTF H
Sbjct: 256 SALLGRMPSAVGYQPTLAEEMGALQERITSTKDGSITSVQAVYVPADDLTDPSPATTFAH 315
Query: 855 LDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSVLQRYKELKD 373
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 145/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K + E+PVG LGRI+N GE ID K + + R + + AP +
Sbjct: 62 GLRRGLKVNDLQHPIEVPVGTATLGRIMNVLGEPIDMKGEIGEEERRGIHRAAPSYEELA 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK +D M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVMDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I + +
Sbjct: 242 IDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGAL------QERITSTKD 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSVLQRYKELK 372
>gi|146313762|ref|YP_001178836.1| F0F1 ATP synthase subunit beta [Enterobacter sp. 638]
gi|166990369|sp|A4WGF5.1|ATPB_ENT38 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|145320638|gb|ABP62785.1| ATP synthase F1 subcomplex beta subunit [Enterobacter sp. 638]
Length = 460
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/338 (71%), Positives = 282/338 (83%)
Query: 575 NNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDP 634
N + +VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG P
Sbjct: 36 NESLVLEVQQQLGGGIVRTIAMGSSDGLRRGLAVKDLEHPIEVPVGKATLGRIMNVLGQP 95
Query: 635 IDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVG 694
ID KG+I + + IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVG
Sbjct: 96 IDMKGDIGEEDRWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVG 155
Query: 695 KTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSG 754
KTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP G
Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPG 215
Query: 755 NRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
NRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 216 NRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 275
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+
Sbjct: 276 MGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAV 335
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 336 DPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 373
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N G+ ID K ++R + + AP +
Sbjct: 62 GLRRGLAVKDLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEDRWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSLLQRYQELK 372
>gi|429102512|ref|ZP_19164486.1| ATP synthase beta chain [Cronobacter turicensis 564]
gi|426289161|emb|CCJ90599.1| ATP synthase beta chain [Cronobacter turicensis 564]
Length = 417
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG PID KG+
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLPVADLEHPIEVPVGKATLGRIMNVLGQPIDMKGD 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 62 GLRRGLPVADLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|357403710|ref|YP_004915634.1| ATP synthase F1 subunit beta [Methylomicrobium alcaliphilum 20Z]
gi|351716375|emb|CCE22035.1| ATP synthase subunit beta (ATPase subunit beta) (ATP synthase F1
sector subunit beta) [Methylomicrobium alcaliphilum 20Z]
Length = 460
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/356 (67%), Positives = 291/356 (81%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + +++ + +VQQQ+G+ +VR+IA G+T+G+ R V ++G PI
Sbjct: 16 VEFPRESLPKVYDALKVEDKNLVLEVQQQLGDGVVRSIAMGSTDGLSRGLQVSNSGAPIA 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID KG I ++ IH P + Q +N +LETGIKVIDL+
Sbjct: 76 VPVGQKTLGRIMNVLGEPIDEKGAIGEDERWAIHREAPSYDEQAASNELLETGIKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMTDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
V+DKVSL+YGQMNEP GNRLRVALTGL++AE FR G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 196 KVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEFFREEGRDVLFFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQP LAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPNLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSRQIAELGIYPAIDPL+S S+QLDP ++G EHY VA V+ LQ+YKEL+D
Sbjct: 316 ATVVLSRQIAELGIYPAIDPLDSTSRQLDPLVIGHEHYNVARAVQGTLQRYKELRD 371
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 139/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G + + +PVG + LGRI+N GE ID K R + + AP ++
Sbjct: 60 GLSRGLQVSNSGAPIAVPVGQKTLGRIMNVLGEPIDEKGAIGEDERWAIHREAPSYDEQA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ NE L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 120 ASNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ +D +V + + TG T+ E+FR+ G+D L
Sbjct: 180 ERTREGNDFYHEMTDSKVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEFFREEGRDVLFF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + ++ L ER I +
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGYQPNLAEEMGVLQER-------------ITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PAI+ S SR
Sbjct: 287 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAIDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + + + G L +Y+EL
Sbjct: 347 VIGHEHYNVARAVQG----TLQRYKEL 369
>gi|339481873|ref|YP_004693659.1| ATP synthase subunit beta [Nitrosomonas sp. Is79A3]
gi|338804018|gb|AEJ00260.1| ATP synthase subunit beta [Nitrosomonas sp. Is79A3]
Length = 459
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/356 (67%), Positives = 292/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E +I K + + ++ + +VQQQ+G+ +VRTIA G+++G++R +V +TGK I
Sbjct: 16 VEFSRESIPKVYDALIMEGSELTLEVQQQLGDGVVRTIALGSSDGLRRGMMVKNTGKQIT 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID GEI +++ IH P F + +LETGIKVIDL+
Sbjct: 76 VPVGTKTLGRIMDVLGRPIDEMGEIGAEQNMSIHREAPAFDELSASTELLETGIKVIDLI 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMKES
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKES 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
VLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 196 KVLDKVALVYGQMNEPPGNRLRVALTGLTMAESFRDEGRDVLFFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGRLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFGHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY A V+ LQ+YKEL+D
Sbjct: 316 ATVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGEEHYNTARAVQQTLQRYKELRD 371
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 136/327 (41%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG + LGRI++ G ID + + ++ + AP +
Sbjct: 60 GLRRGMMVKNTGKQITVPVGTKTLGRIMDVLGRPIDEMGEIGAEQNMSIHREAPAFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 120 ASTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K +D +V + + TG T+ E FRD G+D L
Sbjct: 180 ERTREGNDFYHEMKESKVLDKVALVYGQMNEPPGNRLRVALTGLTMAESFRDEGRDVLFF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + RL ER I +
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 287 GSITSIQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPQ 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + ++ L +Y+EL
Sbjct: 347 VVGEEHYNTARA----VQQTLQRYKEL 369
>gi|253987519|ref|YP_003038875.1| membrane-bound ATP synthase F1 sector beta-subunit [Photorhabdus
asymbiotica]
gi|253778969|emb|CAQ82129.1| membrane-bound ATP synthase F1 sector beta-subunit [Photorhabdus
asymbiotica]
Length = 460
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/361 (66%), Positives = 294/361 (81%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + + K + + ++N + + +VQQQ+G +VR IA G ++G+ R V D
Sbjct: 13 VVDVEFPQDAVPKVYDALEVQNGEAKLVLEVQQQLGGGVVRCIAMGTSDGLSRGLSVTDL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
PI PVG TLGRI+NVLG+PID KG+I +++ PIH P + + +LETGIK
Sbjct: 73 SHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEERWPIHRPAPSYEELSNSQELLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
V+DL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM +SNVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAG
Sbjct: 193 EMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNVARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G E+PVG LGRI+N GE ID K + R + + AP +
Sbjct: 62 GLSRGLSVTDLSHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEERWPIHRPAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYNVARG----VQSILQRYQELK 372
>gi|329296425|ref|ZP_08253761.1| F0F1 ATP synthase subunit beta [Plautia stali symbiont]
Length = 465
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/363 (67%), Positives = 295/363 (81%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + + + + + +KN + + +VQQQ+G +VRTIA G+++G+KR V D KP
Sbjct: 16 VEFPQDAVPQVYSALEVKNGDTRLVLEVQQQLGGGVVRTIAMGSSDGLKRGLEVTDLKKP 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSP-----IHTLPPKFSNQIFNNNILETG 669
I PVG TLGRI+NVLG+PID KG++ + S IH P + +Q + +LETG
Sbjct: 76 IQVPVGKATLGRIMNVLGEPIDMKGDLKEEDGSAVEVSSIHRAAPSYEDQSNSQELLETG 135
Query: 670 IKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDF 729
IKVIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDF
Sbjct: 136 IKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDF 195
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
YHEM +SNV+DKV+L+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TL
Sbjct: 196 YHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTL 255
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+
Sbjct: 256 AGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPA 315
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLDST+ LSRQIA LGIYPA+DPL+S S+QLDP IVG+EHY VA V+ LQ+Y+E
Sbjct: 316 TTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSLLQRYQE 375
Query: 910 LKD 912
LKD
Sbjct: 376 LKD 378
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 146/333 (43%), Gaps = 28/333 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVE-----KIAPG 230
L +G + +K ++PVG LGRI+N GE ID K ++ VE + AP
Sbjct: 62 GLKRGLEVTDLKKPIQVPVGKATLGRIMNVLGEPIDMKGDLKEEDGSAVEVSSIHRAAPS 121
Query: 231 IMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICI 289
D+ + E L TGIK ID M P KG + + G GKT ++ I N + +
Sbjct: 122 YEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSV 181
Query: 290 YVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQ 349
+ +G++ + +++ N +D +V + + TG T+ E FRD G+
Sbjct: 182 FAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 241
Query: 350 DCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKI 409
D L+ D++ ++ A ++S LL R P V Y L E + +++I
Sbjct: 242 DVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERI 288
Query: 410 FNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSR 348
Query: 470 -----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + ++ +L +Y+EL+
Sbjct: 349 QLDPLIVGQEHYDVARG----VQSLLQRYQELK 377
>gi|82701444|ref|YP_411010.1| F0F1 ATP synthase subunit beta [Nitrosospira multiformis ATCC
25196]
gi|118573707|sp|Q2YCA3.1|ATPB1_NITMU RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
synthase F1 sector subunit beta 1; AltName:
Full=F-ATPase subunit beta 1
gi|82409509|gb|ABB73618.1| ATP synthase F1, beta subunit [Nitrosospira multiformis ATCC 25196]
Length = 459
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/356 (67%), Positives = 291/356 (81%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + + L+ + +VQQQ+G+ +VRTIA G++ G++R +V +TG I
Sbjct: 16 VEFAREEMPKVYDALVLEGSELTLEVQQQLGDGVVRTIALGSSEGLRRGMMVTNTGDQIR 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G I +++ IH P F + +LETGIKVIDL+
Sbjct: 76 VPVGTKTLGRIMDVLGTPIDEMGPIGAEQNRSIHQKAPAFDELSASTELLETGIKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYRFTLAGTEVSA
Sbjct: 196 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGRDVLLFVDNIYRFTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG+LQERI+STK+G+ITS+QA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGRLQERITSTKSGSITSIQAVYVPADDLTDPSPATTFGHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY A V+ LQ+YKEL+D
Sbjct: 316 ATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGEEHYSTARAVQQTLQRYKELRD 371
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 158/380 (41%), Gaps = 33/380 (8%)
Query: 132 RCLNQTLNIKFA--------NNTVLSGQINGTTGYEEAAAQGFV-AVLIDDLKNLTQGQK 182
+C+ ++++FA + VL G T ++ G V + + + L +G
Sbjct: 8 QCIGAVVDVEFAREEMPKVYDALVLEGS-ELTLEVQQQLGDGVVRTIALGSSEGLRRGMM 66
Query: 183 CFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLL 242
T +PVG + LGRI++ G ID + ++ + AP + + E L
Sbjct: 67 VTNTGDQIRVPVGTKTLGRIMDVLGTPIDEMGPIGAEQNRSIHQKAPAFDELSASTELLE 126
Query: 243 TGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLI 301
TGIK ID + P KG + + G GKT ++ I N + ++ +G++
Sbjct: 127 TGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGN 186
Query: 302 NVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKH 361
+ +++K N +D +V + + TG T+ E+FRD G+D L+ D++ +
Sbjct: 187 DFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGRDVLLFVDNIYRF 246
Query: 362 AWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFP 421
A ++S LL R P + + RL ER I + +G++T+
Sbjct: 247 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKSGSITSIQ 293
Query: 422 IIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQY 476
+ D+T P D + L ++ + PA++ S SR V G Y
Sbjct: 294 AVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGEEHY 353
Query: 477 KIVKKLSGDIRIMLAQYREL 496
+ ++ L +Y+EL
Sbjct: 354 STARA----VQQTLQRYKEL 369
>gi|424931061|ref|ZP_18349433.1| ATP synthase beta subunit [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|407805248|gb|EKF76499.1| ATP synthase beta subunit [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
Length = 435
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/338 (70%), Positives = 284/338 (84%)
Query: 575 NNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDP 634
N + + +VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG P
Sbjct: 11 NEVLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGQP 70
Query: 635 IDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVG 694
+D KG+I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVG
Sbjct: 71 VDMKGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVG 130
Query: 695 KTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSG 754
KTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP G
Sbjct: 131 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPG 190
Query: 755 NRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
NRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 191 NRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 250
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+
Sbjct: 251 MGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAV 310
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 311 DPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKD 348
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N G+ +D K + R + + AP +
Sbjct: 37 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGQPVDMKGDIGEEERWAIHRAAPSYEELS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 217 VDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDTARG----VQSILQRYQELK 347
>gi|333944305|pdb|3OAA|D Chain D, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
gi|333944306|pdb|3OAA|E Chain E, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
gi|333944307|pdb|3OAA|F Chain F, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
gi|333944313|pdb|3OAA|L Chain L, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
gi|333944314|pdb|3OAA|M Chain M, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
gi|333944315|pdb|3OAA|N Chain N, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
gi|333944321|pdb|3OAA|T Chain T, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
gi|333944322|pdb|3OAA|U Chain U, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
gi|333944323|pdb|3OAA|V Chain V, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
gi|333944329|pdb|3OAA|BB Chain b, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
gi|333944330|pdb|3OAA|CC Chain c, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
gi|333944331|pdb|3OAA|DD Chain d, Structure Of The E.Coli F1-Atp Synthase Inhibited By
Subunit Epsilon
Length = 459
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG+ TLGRI+NVLG+P+D KGE
Sbjct: 41 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGEATLGRIMNVLGEPVDMKGE 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 101 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 221 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 281 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 341 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 372
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 61 GLRRGLDVKDLEHPIEVPVGEATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 120
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 121 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 180
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 181 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 240
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 241 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 287
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 288 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 347
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 348 VVGQEHYDTARG----VQSILQRYQELK 371
>gi|429112293|ref|ZP_19174063.1| ATP synthase beta chain [Cronobacter malonaticus 507]
gi|426313450|emb|CCK00176.1| ATP synthase beta chain [Cronobacter malonaticus 507]
Length = 448
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG PID KG+
Sbjct: 30 EVQQQLGGGIVRTIAMGSSDGLRRGLPVADLEHPIEVPVGKATLGRIMNVLGQPIDMKGD 89
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 90 IGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 149
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 150 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 209
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 210 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 269
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 270 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 329
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 330 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 361
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 50 GLRRGLPVADLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELS 109
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 110 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 169
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 170 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 229
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 230 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 276
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 277 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 336
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 337 VVGQEHYDTARG----VQSILQRYQELK 360
>gi|85712587|ref|ZP_01043634.1| ATP synthase subunit B [Idiomarina baltica OS145]
gi|85693578|gb|EAQ31529.1| ATP synthase subunit B [Idiomarina baltica OS145]
Length = 461
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVR IA G T+G++R I +TG+PI+ PVG TLGRI+NVLG PID G
Sbjct: 43 EVQQQLGGGIVRAIAMGTTDGLRRGIIAENTGEPIMVPVGKKTLGRIMNVLGQPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q +++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERMSIHRAAPTYEEQSNTSDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL+IAE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTIAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VL+R IA LGIYPA+DPL+S
Sbjct: 283 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRDIASLGIYPAVDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++GEEHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGEEHYDTAMGVQEVLQRYKELKD 374
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 125/279 (44%), Gaps = 14/279 (5%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG + LGRI+N G+ ID + R ++ + AP ++ + ++ L TGIK ID +
Sbjct: 79 VPVGKKTLGRIMNVLGQPIDEAGPIGEEERMSIHRAAPTYEEQSNTSDLLETGIKVIDLI 138
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 139 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDS 198
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
N +D +V + + TG TI E FRD G+D L D++ ++ A ++S
Sbjct: 199 NVLDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 258
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P + L E + +++I + G++T+ + D+
Sbjct: 259 LLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPADDL 305
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
T P + D + L+ ++ + PA++ S SR
Sbjct: 306 TDPSPATTFAHLDATVVLNRDIASLGIYPAVDPLDSTSR 344
>gi|334144687|ref|YP_004537843.1| ATP synthase subunit beta [Thioalkalimicrobium cyclicum ALM1]
gi|333965598|gb|AEG32364.1| ATP synthase subunit beta [Thioalkalimicrobium cyclicum ALM1]
Length = 459
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQIG+ +VR IA G+++G+KR IV +TG I PVG TLGRI +VLG+ IDN G
Sbjct: 39 EVQQQIGDGVVRAIAMGSSDGLKRGMIVTNTGSAITVPVGKATLGRIFDVLGNAIDNAGP 98
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ ++ ++PIH PKF + + +LETG+KVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 99 VETEDRAPIHRKAPKFEDLAASQELLETGVKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 158
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM E VLDKV+L+YGQMNEP GNRLRVA
Sbjct: 159 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNEGGVLDKVALVYGQMNEPPGNRLRVA 218
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG++QE
Sbjct: 219 LTGLTMAEFFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGQVQE 278
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VL+R IAE GIYPAIDPL+S
Sbjct: 279 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLNRSIAETGIYPAIDPLDST 338
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VAN V+ LQ+YKELKD
Sbjct: 339 SRQLDPLVVGDEHYNVANGVQQTLQRYKELKD 370
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 143/336 (42%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L +G T +PVG LGRI + G IDN ++R + +
Sbjct: 51 AIAMGSSDGLKRGMIVTNTGSAITVPVGKATLGRIFDVLGNAIDNAGPVETEDRAPIHRK 110
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP D + E L TG+K ID + P KG + + G GKT ++ I N +
Sbjct: 111 APKFEDLAASQELLETGVKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 170
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++ +D +V + + TG T+ E+FRD
Sbjct: 171 YSVFAGVGERTREGNDFYHEMNEGGVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRD 230
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L D++ ++ A ++S LL R P + L E ++ +
Sbjct: 231 EGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGQV------Q 277
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L+ ++ + PAI+ S
Sbjct: 278 ERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLNRSIAETGIYPAIDPLDS 337
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y + + ++ L +Y+EL+
Sbjct: 338 TSRQLDPLVVGDEHYNV----ANGVQQTLQRYKELK 369
>gi|296105474|ref|YP_003615620.1| F0F1 ATP synthase subunit beta [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|334121923|ref|ZP_08495966.1| ATP synthase F1 sector beta subunit [Enterobacter hormaechei ATCC
49162]
gi|354721472|ref|ZP_09035687.1| F0F1 ATP synthase subunit beta [Enterobacter mori LMG 25706]
gi|392981390|ref|YP_006479978.1| F0F1 ATP synthase subunit beta [Enterobacter cloacae subsp.
dissolvens SDM]
gi|401675647|ref|ZP_10807637.1| F0F1 ATP synthase subunit beta [Enterobacter sp. SST3]
gi|401761538|ref|YP_006576545.1| F0F1 ATP synthase subunit beta [Enterobacter cloacae subsp. cloacae
ENHKU01]
gi|419959808|ref|ZP_14475857.1| F0F1 ATP synthase subunit beta [Enterobacter cloacae subsp. cloacae
GS1]
gi|295059933|gb|ADF64671.1| F0F1 ATP synthase subunit beta [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|333392505|gb|EGK63607.1| ATP synthase F1 sector beta subunit [Enterobacter hormaechei ATCC
49162]
gi|388605269|gb|EIM34490.1| F0F1 ATP synthase subunit beta [Enterobacter cloacae subsp. cloacae
GS1]
gi|392327323|gb|AFM62276.1| F0F1 ATP synthase subunit beta [Enterobacter cloacae subsp.
dissolvens SDM]
gi|400173072|gb|AFP67921.1| F0F1 ATP synthase subunit beta [Enterobacter cloacae subsp. cloacae
ENHKU01]
gi|400217178|gb|EJO48074.1| F0F1 ATP synthase subunit beta [Enterobacter sp. SST3]
Length = 460
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/338 (71%), Positives = 283/338 (83%)
Query: 575 NNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDP 634
N + +VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG P
Sbjct: 36 NESLVLEVQQQLGGGIVRTIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQP 95
Query: 635 IDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVG 694
ID KG+I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVG
Sbjct: 96 IDMKGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVG 155
Query: 695 KTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSG 754
KTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP G
Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPG 215
Query: 755 NRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
NRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 216 NRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 275
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+
Sbjct: 276 MGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAV 335
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 336 DPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 373
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + E E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 62 GLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSLLQRYQELK 372
>gi|254491137|ref|ZP_05104318.1| ATP synthase F1, beta subunit [Methylophaga thiooxidans DMS010]
gi|224463650|gb|EEF79918.1| ATP synthase F1, beta subunit [Methylophaga thiooxydans DMS010]
Length = 458
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VR IA G T+G+KR+ V +TG+ I PVG TLGRI++VLG PID KG+
Sbjct: 40 EVQQQLGDGVVRAIAMGTTDGLKRDLAVSNTGEAISVPVGQKTLGRIMDVLGKPIDEKGD 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH PKF +N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWGIHRKAPKFDELAASNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEFFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IAELGIYPAIDPL+S
Sbjct: 280 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRSIAELGIYPAIDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG +HY +A V+ LQ+YKELKD
Sbjct: 340 SRQLDPLVVGNDHYNIARGVQNTLQRYKELKD 371
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 147/349 (42%), Gaps = 25/349 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T + +PVG + LGRI++ G+ ID K + R + + AP + + NE L TGI
Sbjct: 70 TGEAISVPVGQKTLGRIMDVLGKPIDEKGDIGEEERWGIHRKAPKFDELAASNELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID + P KG + + G GKT ++ I N + ++ +G++ +
Sbjct: 130 KVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
+++ N +D +V + + TG T+ E+FRD G+D L D++ ++ A
Sbjct: 190 HEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLFFVDNIYRYTLA 249
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P + L E + +++I + G++T+ +
Sbjct: 250 GTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSIQAVY 296
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P + D + L ++ PAI+ S SR V G Y I
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRSIAELGIYPAIDPLDSTSRQLDPLVVGNDHYNIA 356
Query: 480 KKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQ 526
+ ++ L +Y+EL+ +L K + KI M Q
Sbjct: 357 RG----VQNTLQRYKELKDIIAILGMDELSEEDKMSVSRARKIQRFMSQ 401
>gi|295095359|emb|CBK84449.1| ATP synthase F1 subcomplex beta subunit [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 460
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/338 (71%), Positives = 283/338 (83%)
Query: 575 NNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDP 634
N + +VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG P
Sbjct: 36 NESLVLEVQQQLGGGIVRTIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQP 95
Query: 635 IDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVG 694
ID KG+I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVG
Sbjct: 96 IDMKGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVG 155
Query: 695 KTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSG 754
KTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP G
Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPG 215
Query: 755 NRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
NRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 216 NRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 275
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+
Sbjct: 276 MGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAV 335
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 336 DPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 373
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + E E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 62 GLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSLLQRYQELK 372
>gi|74318815|ref|YP_316555.1| ATP synthase F0F1 subunit beta [Thiobacillus denitrificans ATCC
25259]
gi|118573774|sp|Q3SF66.1|ATPB_THIDA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|74058310|gb|AAZ98750.1| F-type H+-transporting ATP synthase, beta subunit [Thiobacillus
denitrificans ATCC 25259]
Length = 459
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T+G++R V+ TG PI+ PVG TLGRI+NVLGDP+D G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTDGLRRGMDVLSTGNPIMVPVGQKTLGRIMNVLGDPVDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++ PIH P +++Q ILETGIKVIDL+ P KGGK+GLFGGAGVGKTV +M
Sbjct: 100 IGAETTMPIHRKAPAYADQAATVEILETGIKVIDLIMPIAKGGKVGLFGGAGVGKTVTLM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA++H G SVF GVGER+REGNDFYHEMKE VLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAVQHSGFSVFAGVGERTREGNDFYHEMKEGGVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLA+EMG+LQE
Sbjct: 220 LTGLTMAEYFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGRLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS QA+YVPADDLTDPSP+TTF HLD+T+VLSRQ+AELGIYPA+DPL+S
Sbjct: 280 RITSTKTGSITSFQAVYVPADDLTDPSPATTFAHLDATLVLSRQVAELGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+ LDP +VGEEHY VA +V+ LQKYKEL+D
Sbjct: 340 SRILDPQVVGEEHYTVARKVQGTLQKYKELRD 371
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 141/327 (43%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG + LGRI+N G+ +D + + + AP D+
Sbjct: 60 GLRRGMDVLSTGNPIMVPVGQKTLGRIMNVLGDPVDEAGPIGAETTMPIHRKAPAYADQA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID ++PI KG + + G GKT ++ I N + ++ +G
Sbjct: 120 ATVEILETGIKVIDLIMPIAKGGKVGLFGGAGVGKTVTLMELIRNIAVQHSGFSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K +D +V + + TG T+ EYFRD G+D L+
Sbjct: 180 ERTREGNDFYHEMKEGGVLDKVALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLLF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + RL ER I +
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGRLQER-------------ITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+F + D+T P + D + L + PA++ S SR
Sbjct: 287 GSITSFQAVYVPADDLTDPSPATTFAHLDATLVLSRQVAELGIYPAVDPLDSTSRILDPQ 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + +K+ G L +Y+EL
Sbjct: 347 VVGEEHYTVARKVQG----TLQKYKEL 369
>gi|373466426|ref|ZP_09557742.1| ATP synthase F1, beta subunit [Haemophilus sp. oral taxon 851 str.
F0397]
gi|417840360|ref|ZP_12486498.1| ATP synthase subunit beta [Haemophilus haemolyticus M19107]
gi|417843674|ref|ZP_12489744.1| ATP synthase subunit beta [Haemophilus haemolyticus M21127]
gi|419838669|ref|ZP_14362092.1| ATP synthase F1, beta subunit [Haemophilus haemolyticus HK386]
gi|341948628|gb|EGT75249.1| ATP synthase subunit beta [Haemophilus haemolyticus M19107]
gi|341949033|gb|EGT75646.1| ATP synthase subunit beta [Haemophilus haemolyticus M21127]
gi|371760534|gb|EHO49216.1| ATP synthase F1, beta subunit [Haemophilus sp. oral taxon 851 str.
F0397]
gi|386910259|gb|EIJ74918.1| ATP synthase F1, beta subunit [Haemophilus haemolyticus HK386]
Length = 457
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/356 (67%), Positives = 295/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGASDGLKRGLKVENTNDPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEQGPIGEEERWAIHRSAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY +A V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDIARGVQGILQRYKELKD 370
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID + + R + + AP ++
Sbjct: 59 GLKRGLKVENTNDPIQVPVGTKTLGRIMNVLGEPIDEQGPIGEEERWAIHRSAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y I + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDIARGVQG----ILQRYKELK 369
>gi|386829244|ref|ZP_10116351.1| ATP synthase, F1 beta subunit [Beggiatoa alba B18LD]
gi|386430128|gb|EIJ43956.1| ATP synthase, F1 beta subunit [Beggiatoa alba B18LD]
Length = 458
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G T+G+ R V +TG PI PVG TLGRI++VLG PID KG
Sbjct: 40 EVQQQLGDGVVRTIAMGTTDGMCRELTVKNTGAPISVPVGQKTLGRIMDVLGTPIDEKGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P++ + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEQRWGIHRKAPRYEDLSASTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM E VLDKVSL+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMSEGGVLDKVSLVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
L+GL++AE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LSGLTMAEFFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGALQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELGIYPA+DPL+S
Sbjct: 280 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY+ A V+ LQ+YKELKD
Sbjct: 340 SRQLDPLVVGQEHYETARAVQGTLQRYKELKD 371
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 134/312 (42%), Gaps = 23/312 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG + LGRI++ G ID K + R + + AP D + E L TGIK ID +
Sbjct: 76 VPVGQKTLGRIMDVLGTPIDEKGPIGEEQRWGIHRKAPRYEDLSASTELLETGIKVIDLV 135
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMSEG 195
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
+D +V + + +G T+ E+FRD G+D L+ D++ ++ A ++S
Sbjct: 196 GVLDKVSLVYGQMNEPPGNRLRVALSGLTMAEFFRDEGRDVLLFIDNIYRYTLAGTEVSA 255
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P + L E + +++I + G++T+ + D+
Sbjct: 256 LLGRMPSAVGY-------QPTLAEEMGAL------QERITSTKTGSITSIQAVYVPADDL 302
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P + D + L + PA++ S SR V G Y+ + + G
Sbjct: 303 TDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQEHYETARAVQG- 361
Query: 486 IRIMLAQYRELE 497
L +Y+EL+
Sbjct: 362 ---TLQRYKELK 370
>gi|421496327|ref|ZP_15943559.1| F0F1 ATP synthase subunit beta [Aeromonas media WS]
gi|407184591|gb|EKE58416.1| F0F1 ATP synthase subunit beta [Aeromonas media WS]
Length = 449
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQIG +VR I G+++G++R VV++GK I PVG TLGRI+NVLG+PID KG
Sbjct: 31 EVQQQIGGGVVRCITMGSSDGLRRGLEVVNSGKAIQVPVGTSTLGRIMNVLGEPIDEKGP 90
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 91 IGEEERWSIHREAPSYEDQSNSAELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 150
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 151 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMMESNVLDKVSLVYGQMNEPPGNRLRVA 210
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 211 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 270
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+TIVLSRQIA LGIYPA+DPL+S
Sbjct: 271 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATIVLSRQIAALGIYPAVDPLDST 330
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG++HY+ A V+ LQ+YKELKD
Sbjct: 331 SRQLDPLVVGKDHYETARGVQIVLQRYKELKD 362
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + K ++PVG LGRI+N GE ID K + R ++ + AP D+
Sbjct: 51 GLRRGLEVVNSGKAIQVPVGTSTLGRIMNVLGEPIDEKGPIGEEERWSIHREAPSYEDQS 110
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 111 NSAELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 170
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 171 ERTREGNDFYHEMMESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 230
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 231 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 277
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D I L + PA++ S SR
Sbjct: 278 GSITSVQAVYVPADDLTDPSPATTFAHLDATIVLSRQIAALGIYPAVDPLDSTSRQLDPL 337
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++I+L +Y+EL+
Sbjct: 338 VVGKDHYETAR----GVQIVLQRYKELK 361
>gi|304413049|ref|ZP_07394522.1| membrane-bound ATP synthase, F1 complex, beta subunit [Candidatus
Regiella insecticola LSR1]
gi|304283892|gb|EFL92285.1| membrane-bound ATP synthase, F1 complex, beta subunit [Candidatus
Regiella insecticola LSR1]
Length = 462
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/344 (69%), Positives = 288/344 (83%), Gaps = 2/344 (0%)
Query: 571 INLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRIL 628
++LK++ + + +VQQQ+G +VR I G+++G++R V D PI PVG TLGRI+
Sbjct: 32 VDLKDSAAKLVLEVQQQLGGGVVRCIVMGSSDGLRRGLKVTDLAHPIEVPVGAATLGRIM 91
Query: 629 NVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLF 688
NVLGDPID KG I K++ IH P + + ++LETGIKV+DL+CPF KGGK+GLF
Sbjct: 92 NVLGDPIDMKGPIGEKERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLF 151
Query: 689 GGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQ 748
GGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQ
Sbjct: 152 GGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMMDSNVLDKVSLVYGQ 211
Query: 749 MNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQ 808
MNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQ
Sbjct: 212 MNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQ 271
Query: 809 PTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAEL 868
PTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA L
Sbjct: 272 PTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASL 331
Query: 869 GIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
GIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 332 GIYPAVDPLDSTSRQLDPLVVGQEHYNVARGVQSILQRYQELKD 375
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 140/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K E+PVG LGRI+N G+ ID K K R + + AP +
Sbjct: 64 GLRRGLKVTDLAHPIEVPVGAATLGRIMNVLGDPIDMKGPIGEKERWAIHREAPSYEELA 123
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S + L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 124 SSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 183
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 184 ERTREGNDFYHEMMDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 243
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 244 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 290
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 291 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 350
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 351 VVGQEHYNVARG----VQSILQRYQELK 374
>gi|261341611|ref|ZP_05969469.1| hypothetical protein ENTCAN_08074 [Enterobacter cancerogenus ATCC
35316]
gi|365972815|ref|YP_004954376.1| ATP synthase subunit beta [Enterobacter cloacae EcWSU1]
gi|288315963|gb|EFC54901.1| ATP synthase F1, beta subunit [Enterobacter cancerogenus ATCC
35316]
gi|365751728|gb|AEW75955.1| ATP synthase subunit beta [Enterobacter cloacae EcWSU1]
Length = 460
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/338 (71%), Positives = 283/338 (83%)
Query: 575 NNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDP 634
N + +VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG P
Sbjct: 36 NESLVLEVQQQLGGGIVRTIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQP 95
Query: 635 IDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVG 694
ID KG+I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVG
Sbjct: 96 IDMKGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVG 155
Query: 695 KTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSG 754
KTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP G
Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPG 215
Query: 755 NRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
NRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 216 NRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 275
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+
Sbjct: 276 MGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAV 335
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 336 DPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 373
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + E E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 62 GLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSLLQRYQELK 372
>gi|422021287|ref|ZP_16367800.1| F0F1 ATP synthase subunit beta [Providencia sneebia DSM 19967]
gi|414099756|gb|EKT61395.1| F0F1 ATP synthase subunit beta [Providencia sneebia DSM 19967]
Length = 460
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/361 (67%), Positives = 292/361 (80%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + N+ K + + + N + +VQQQ+G +VR IA G ++G+ R V D
Sbjct: 13 VVDVEFPQDNVPKVYDALEVMNGKEKLVLEVQQQLGGGVVRCIAMGTSDGLSRGLDVTDL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
PI PVG TLGRI+NVLGDPID KG+I +++ IH P + + +LETGIK
Sbjct: 73 EHPIEVPVGKATLGRIMNVLGDPIDMKGDIGEEERWSIHRAAPSYEELSSSTELLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
V+DL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM +SNVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAG
Sbjct: 193 EMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSRQIA LGIYPA+DPL+S S+QLDP IVG+EHY VA V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G E E+PVG LGRI+N G+ ID K + R ++ + AP +
Sbjct: 62 GLSRGLDVTDLEHPIEVPVGKATLGRIMNVLGDPIDMKGDIGEEERWSIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSTELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + ++ +L +Y+EL+
Sbjct: 349 IVGQEHYDVARG----VQSILQRYQELK 372
>gi|112791336|gb|ABI21938.1| ATP synthase beta subunit, partial [Citrobacter freundii]
Length = 421
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/345 (69%), Positives = 288/345 (83%), Gaps = 1/345 (0%)
Query: 568 FRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRI 627
++N K ++ + +VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI
Sbjct: 5 LEVMNGKESLVL-EVQQQLGGGIVRTIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGRI 63
Query: 628 LNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGL 687
+NVLG PID KG+I +++ IH P + + +LETGIKVIDL+CPF KGGK+GL
Sbjct: 64 MNVLGHPIDMKGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGL 123
Query: 688 FGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYG 747
FGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YG
Sbjct: 124 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 183
Query: 748 QMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY 807
QMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGY
Sbjct: 184 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGY 243
Query: 808 QPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAE 867
QPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA
Sbjct: 244 QPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAS 303
Query: 868 LGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LGIYPA+DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 304 LGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 348
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + E E+PVG LGRI+N G ID K + R + + AP +
Sbjct: 37 GLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGHPIDMKGDIGEEERWAIHRAAPSYEELS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 217 VDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDTARG----VQSLLQRYQELK 347
>gi|417845903|ref|ZP_12491921.1| ATP synthase subunit beta [Haemophilus haemolyticus M21639]
gi|341953872|gb|EGT80367.1| ATP synthase subunit beta [Haemophilus haemolyticus M21639]
Length = 457
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/356 (67%), Positives = 295/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGASDGLKRGLKVENTNDPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEQGPIGEEERWAIHRSAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY +A V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDIARGVQGILQRYKELKD 370
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID + + R + + AP ++
Sbjct: 59 GLKRGLKVENTNDPIQVPVGTKTLGRIMNVLGEPIDEQGPIGEEERWAIHRSAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y I + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDIARGVQG----ILQRYKELK 369
>gi|152972641|ref|YP_001337787.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238897239|ref|YP_002921987.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|262040363|ref|ZP_06013609.1| ATP synthase F1 sector subunit beta [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330005181|ref|ZP_08305143.1| ATP synthase F1, beta subunit [Klebsiella sp. MS 92-3]
gi|365141203|ref|ZP_09347058.1| ATP synthase subunit beta [Klebsiella sp. 4_1_44FAA]
gi|378981466|ref|YP_005229607.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|386037272|ref|YP_005957185.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae KCTC 2242]
gi|402783234|ref|YP_006638780.1| ATP synthase subunit beta [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|419765316|ref|ZP_14291554.1| ATP synthase F1, beta subunit [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|419974175|ref|ZP_14489596.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419979424|ref|ZP_14494715.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419986280|ref|ZP_14501414.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419991958|ref|ZP_14506919.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419996945|ref|ZP_14511744.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420004169|ref|ZP_14518809.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420009866|ref|ZP_14524345.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420015100|ref|ZP_14529403.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420021388|ref|ZP_14535568.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420026959|ref|ZP_14540957.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420032719|ref|ZP_14546531.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420039459|ref|ZP_14553093.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420044464|ref|ZP_14557944.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420050390|ref|ZP_14563690.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420055778|ref|ZP_14568942.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420062026|ref|ZP_14575006.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420066366|ref|ZP_14579167.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420071376|ref|ZP_14584022.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420076716|ref|ZP_14589186.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420084120|ref|ZP_14596387.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421918906|ref|ZP_16348418.1| ATP synthase beta chain [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|424833101|ref|ZP_18257829.1| ATP synthase F1, beta subunit [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|425074152|ref|ZP_18477255.1| ATP synthase subunit beta [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425083902|ref|ZP_18486999.1| ATP synthase subunit beta [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|425084788|ref|ZP_18487881.1| ATP synthase subunit beta [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|425094017|ref|ZP_18497101.1| ATP synthase subunit beta [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|428148875|ref|ZP_18996721.1| ATP synthase beta chain [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428931922|ref|ZP_19005510.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae JHCK1]
gi|428938981|ref|ZP_19012099.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae VA360]
gi|449049111|ref|ZP_21731360.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae hvKP1]
gi|166201714|sp|A6TG36.1|ATPB_KLEP7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|150957490|gb|ABR79520.1| ATP synthase subunit B [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|238549569|dbj|BAH65920.1| ATP synthase subunit B [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259042304|gb|EEW43329.1| ATP synthase F1 sector subunit beta [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328536387|gb|EGF62746.1| ATP synthase F1, beta subunit [Klebsiella sp. MS 92-3]
gi|339764400|gb|AEK00621.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae KCTC 2242]
gi|363653048|gb|EHL92041.1| ATP synthase subunit beta [Klebsiella sp. 4_1_44FAA]
gi|364520877|gb|AEW64005.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397346757|gb|EJJ39870.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397348606|gb|EJJ41705.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397348926|gb|EJJ42023.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397362344|gb|EJJ54995.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397363809|gb|EJJ56445.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397366985|gb|EJJ59599.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397377148|gb|EJJ69389.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397380008|gb|EJJ72194.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397386771|gb|EJJ78834.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397394345|gb|EJJ86076.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397396759|gb|EJJ88445.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397403149|gb|EJJ94734.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397411359|gb|EJK02618.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397411898|gb|EJK03143.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397421398|gb|EJK12418.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397429136|gb|EJK19856.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397430128|gb|EJK20829.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397440348|gb|EJK30757.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397447046|gb|EJK37250.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397450528|gb|EJK40631.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|397741824|gb|EJK89044.1| ATP synthase F1, beta subunit [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|402544068|gb|AFQ68217.1| ATP synthase beta chain [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|405595617|gb|EKB68987.1| ATP synthase subunit beta [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405598394|gb|EKB71623.1| ATP synthase subunit beta [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|405608203|gb|EKB81154.1| ATP synthase subunit beta [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|405610513|gb|EKB83317.1| ATP synthase subunit beta [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|410118859|emb|CCM91043.1| ATP synthase beta chain [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|414710550|emb|CCN32254.1| ATP synthase F1, beta subunit [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426304738|gb|EKV66875.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae VA360]
gi|426307619|gb|EKV69697.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae JHCK1]
gi|427541170|emb|CCM92859.1| ATP synthase beta chain [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|448876861|gb|EMB11838.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae hvKP1]
Length = 460
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/338 (70%), Positives = 284/338 (84%)
Query: 575 NNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDP 634
N + + +VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG P
Sbjct: 36 NEVLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGQP 95
Query: 635 IDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVG 694
+D KG+I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVG
Sbjct: 96 VDMKGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVG 155
Query: 695 KTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSG 754
KTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP G
Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPG 215
Query: 755 NRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
NRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 216 NRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 275
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+
Sbjct: 276 MGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAV 335
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 336 DPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N G+ +D K + R + + AP +
Sbjct: 62 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGQPVDMKGDIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|317050178|ref|YP_004117826.1| ATP synthase F1 subunit beta [Pantoea sp. At-9b]
gi|316951795|gb|ADU71270.1| ATP synthase F1, beta subunit [Pantoea sp. At-9b]
Length = 465
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/363 (67%), Positives = 295/363 (81%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + + + + + +KN + + +VQQQ+G +VRTIA G ++G+KR V D KP
Sbjct: 16 VEFPQDAVPQVYSALEVKNGDARLVLEVQQQLGGGVVRTIAMGTSDGLKRGLEVADLKKP 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSK-----KKSPIHTLPPKFSNQIFNNNILETG 669
I PVG TLGRI+NVLG+PID KG++ + + S IH P + +Q + +LETG
Sbjct: 76 IQVPVGKATLGRIMNVLGEPIDMKGDLKEEDGSVPEVSSIHRAAPSYEDQSNSQELLETG 135
Query: 670 IKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDF 729
IKVIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDF
Sbjct: 136 IKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDF 195
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
YHEM +SNV+DKV+L+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TL
Sbjct: 196 YHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTL 255
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+
Sbjct: 256 AGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPA 315
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLDST+ LSRQIA LGIYPA+DPL+S S+QLDP IVG+EHY VA V+ LQ+Y+E
Sbjct: 316 TTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSLLQRYQE 375
Query: 910 LKD 912
LKD
Sbjct: 376 LKD 378
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 145/333 (43%), Gaps = 28/333 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKF-----LIKNRETVEKIAPG 230
L +G + +K ++PVG LGRI+N GE ID K + ++ + AP
Sbjct: 62 GLKRGLEVADLKKPIQVPVGKATLGRIMNVLGEPIDMKGDLKEEDGSVPEVSSIHRAAPS 121
Query: 231 IMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICI 289
D+ + E L TGIK ID M P KG + + G GKT ++ I N + +
Sbjct: 122 YEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSV 181
Query: 290 YVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQ 349
+ +G++ + +++ N +D +V + + TG T+ E FRD G+
Sbjct: 182 FAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 241
Query: 350 DCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKI 409
D L+ D++ ++ A ++S LL R P V Y L E + +++I
Sbjct: 242 DVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERI 288
Query: 410 FNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSR 348
Query: 470 -----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + ++ +L +Y+EL+
Sbjct: 349 QLDPLIVGQEHYDVARG----VQSLLQRYQELK 377
>gi|315128169|ref|YP_004070172.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas sp. SM9913]
gi|359444281|ref|ZP_09234077.1| F-type H+-transporting ATPase subunit beta [Pseudoalteromonas sp.
BSi20439]
gi|315016682|gb|ADT70020.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas sp. SM9913]
gi|358041884|dbj|GAA70326.1| F-type H+-transporting ATPase subunit beta [Pseudoalteromonas sp.
BSi20439]
Length = 461
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G T+G++R V +TG+ I PVG TLGRI+NVLG+PID G
Sbjct: 43 EVQQQLGGGVVRTIALGTTDGLRRGAAVANTGEAIQVPVGTKTLGRIMNVLGEPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++ IH P + Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEDERMSIHRAAPTYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RIASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSS 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++GEEHY +A V+ LQ+YKELKD
Sbjct: 343 SRQLDPQVIGEEHYGIARGVQTVLQRYKELKD 374
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T + ++PVG + LGRI+N GE ID R ++ + AP ++
Sbjct: 63 GLRRGAAVANTGEAIQVPVGTKTLGRIMNVLGEPIDEAGPIGEDERMSIHRAAPTYEEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 123 SSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 183 ERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 243 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERIASTKT 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDPQ 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y I + ++ +L +Y+EL+
Sbjct: 350 VIGEEHYGIARG----VQTVLQRYKELK 373
>gi|54301816|ref|YP_131809.1| F0F1 ATP synthase subunit beta [Photobacterium profundum SS9]
gi|81828635|sp|Q6LKZ6.1|ATPB2_PHOPR RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
synthase F1 sector subunit beta 2; AltName:
Full=F-ATPase subunit beta 2
gi|46915236|emb|CAG22009.1| putative ATP synthase F1, beta subunit [Photobacterium profundum
SS9]
Length = 461
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/345 (70%), Positives = 286/345 (82%)
Query: 568 FRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRI 627
II+ N+ + +VQQQIG IVR IA G+++G++R + V+TG+PI PVG+ TLGRI
Sbjct: 30 LNIIDGNNSSLVLEVQQQIGSGIVRCIAMGSSDGMRRGLVAVNTGEPITVPVGEETLGRI 89
Query: 628 LNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGL 687
+NVLG PID GEI K PIH PP + +Q + +LETG+KVIDL+CPF KGGKIGL
Sbjct: 90 MNVLGQPIDECGEIGQKTSYPIHREPPSYEDQANSTELLETGVKVIDLICPFAKGGKIGL 149
Query: 688 FGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYG 747
FGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFY+EMKE+ VLDKV+++YG
Sbjct: 150 FGGAGVGKTVNMMELINNIAKAHSGLSVFTGVGERTREGNDFYYEMKEAGVLDKVAMVYG 209
Query: 748 QMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY 807
QMNEP GNRLRVALTGL+IAE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGY
Sbjct: 210 QMNEPPGNRLRVALTGLTIAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY 269
Query: 808 QPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAE 867
QPTLAEEMG LQERI+ST G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA
Sbjct: 270 QPTLAEEMGVLQERITSTHKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAA 329
Query: 868 LGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LG+YPAIDPL+S S+QLDP +VG EHY VA V+ LQ+YKELKD
Sbjct: 330 LGLYPAIDPLDSTSRQLDPLVVGVEHYDVARGVQTVLQRYKELKD 374
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 165/390 (42%), Gaps = 30/390 (7%)
Query: 117 IIRFAYNIEYDYFDPRCLNQTLNIKFANNTVLSGQINGTTGYEEAAAQGFV-AVLIDDLK 175
+I ++E+D + LNI NN+ L ++ G G V + +
Sbjct: 9 VIGAVVDVEFDQDSVPRVYDALNIIDGNNSSLVLEVQQQIG------SGIVRCIAMGSSD 62
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
+ +G T + +PVG E LGRI+N G+ ID + K + + P D+
Sbjct: 63 GMRRGLVAVNTGEPITVPVGEETLGRIMNVLGQPIDECGEIGQKTSYPIHREPPSYEDQA 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TG+K ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 123 NSTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + TG TI E FRD G+D L+
Sbjct: 183 ERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVALTGLTIAERFRDEGRDVLLF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I + +
Sbjct: 243 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTHK 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ PAI+ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPL 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESF 499
V G Y + + ++ +L +Y+EL+
Sbjct: 350 VVGVEHYDVARG----VQTVLQRYKELKDI 375
>gi|417394514|ref|ZP_12156670.1| ATP synthase subunit B [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
gi|353605283|gb|EHC59834.1| ATP synthase subunit B [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
Length = 387
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 30 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 89
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 90 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 149
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 150 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 209
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 210 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 269
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 270 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 329
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 330 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 361
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 143/330 (43%), Gaps = 23/330 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 50 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 109
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 110 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 169
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 170 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 229
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 230 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 276
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 277 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 336
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESF 499
V G Y + ++ +L +Y+EL+
Sbjct: 337 VVGQEHYDTARG----VQSILQRYQELKDI 362
>gi|335424007|ref|ZP_08553025.1| F0F1 ATP synthase subunit beta [Salinisphaera shabanensis E1L3A]
gi|334890758|gb|EGM29020.1| F0F1 ATP synthase subunit beta [Salinisphaera shabanensis E1L3A]
Length = 466
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/363 (67%), Positives = 294/363 (80%), Gaps = 3/363 (0%)
Query: 553 PIKQIELFEINIIKYFRIINLK---NNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVV 609
P+ +E ++ + F + LK + +V+QQIG+ +VR IA G T G+ R V
Sbjct: 12 PVVDVEFDRESLPRIFDALILKVEGGEDLVLEVEQQIGDGVVRCIAMGVTEGLSRGAAVE 71
Query: 610 DTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETG 669
+TGKPI PVG TLGRI+NVLG PID G+I + + +PIH PP F +Q +LETG
Sbjct: 72 NTGKPISVPVGQKTLGRIMNVLGHPIDKNGDIGADETAPIHRAPPSFEDQSGGQELLETG 131
Query: 670 IKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDF 729
IKVIDLLCPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDF
Sbjct: 132 IKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDF 191
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
Y+EM+ESNV+DKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLFIDNIYR+TL
Sbjct: 192 YYEMQESNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLLFIDNIYRYTL 251
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+
Sbjct: 252 AGTEVSALLGRMPSAVGYQPTLAEEMGLLQERITSTKTGSITSVQAVYVPADDLTDPSPA 311
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLD+T+VL+R IAE GIYPA+DPL+S S+QLDP +VG +HY+ A +V+ LQ+Y+E
Sbjct: 312 TTFAHLDATVVLARGIAERGIYPAVDPLDSTSRQLDPNVVGNDHYQTARDVQETLQRYRE 371
Query: 910 LKD 912
LKD
Sbjct: 372 LKD 374
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 153/359 (42%), Gaps = 29/359 (8%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L++G T K +PVG + LGRI+N G ID + + P D+
Sbjct: 62 EGLSRGAAVENTGKPISVPVGQKTLGRIMNVLGHPIDKNGDIGADETAPIHRAPPSFEDQ 121
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
E L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 122 SGGQELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGV 181
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ N +D +V + + TG T+ E+FRD G+D L+
Sbjct: 182 GERTREGNDFYYEMQESNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLL 241
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y + + + L +++I +
Sbjct: 242 FIDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGLLQERITSTK 288
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 289 TGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLARGIAERGIYPAVDPLDSTSRQLDP 348
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y+ + D++ L +YREL+ + I+ +L +K+S+ +K
Sbjct: 349 NVVGNDHYQTAR----DVQETLQRYRELKDI------IAILGMDELSEEDKLSVSRARK 397
>gi|398793965|ref|ZP_10554191.1| ATP synthase, F1 beta subunit [Pantoea sp. YR343]
gi|398209557|gb|EJM96228.1| ATP synthase, F1 beta subunit [Pantoea sp. YR343]
Length = 465
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/363 (67%), Positives = 295/363 (81%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + + + + + +KN + + +VQQQ+G +VRTIA G ++G+KR V D KP
Sbjct: 16 VEFPQDAVPQVYSALEVKNGDARLVLEVQQQLGGGVVRTIAMGTSDGLKRGLEVTDLKKP 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSK-----KKSPIHTLPPKFSNQIFNNNILETG 669
I PVG TLGRI+NVLG+PID KG++ + + S IH P + +Q + +LETG
Sbjct: 76 IQVPVGKATLGRIMNVLGEPIDMKGDLQNDDGTVVEVSSIHRAAPSYEDQSNSQELLETG 135
Query: 670 IKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDF 729
IKVIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDF
Sbjct: 136 IKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDF 195
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
YHEM +SNV+DKV+L+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TL
Sbjct: 196 YHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTL 255
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+
Sbjct: 256 AGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPA 315
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLDST+ LSRQIA LGIYPA+DPL+S S+QLDP IVG+EHY VA V+ LQ+Y+E
Sbjct: 316 TTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSLLQRYQE 375
Query: 910 LKD 912
LKD
Sbjct: 376 LKD 378
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 145/333 (43%), Gaps = 28/333 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVE-----KIAPG 230
L +G + +K ++PVG LGRI+N GE ID K + VE + AP
Sbjct: 62 GLKRGLEVTDLKKPIQVPVGKATLGRIMNVLGEPIDMKGDLQNDDGTVVEVSSIHRAAPS 121
Query: 231 IMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICI 289
D+ + E L TGIK ID M P KG + + G GKT ++ I N + +
Sbjct: 122 YEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSV 181
Query: 290 YVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQ 349
+ +G++ + +++ N +D +V + + TG T+ E FRD G+
Sbjct: 182 FAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 241
Query: 350 DCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKI 409
D L+ D++ ++ A ++S LL R P V Y L E + +++I
Sbjct: 242 DVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERI 288
Query: 410 FNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSR 348
Query: 470 -----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + ++ +L +Y+EL+
Sbjct: 349 QLDPLIVGQEHYDVARG----VQSLLQRYQELK 377
>gi|345301571|ref|YP_004830929.1| ATP synthase subunit beta [Enterobacter asburiae LF7a]
gi|345095508|gb|AEN67144.1| ATP synthase subunit beta [Enterobacter asburiae LF7a]
Length = 460
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/338 (71%), Positives = 283/338 (83%)
Query: 575 NNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDP 634
N + +VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG P
Sbjct: 36 NESLVLEVQQQLGGGIVRTIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGHP 95
Query: 635 IDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVG 694
ID KG+I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVG
Sbjct: 96 IDMKGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVG 155
Query: 695 KTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSG 754
KTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP G
Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPG 215
Query: 755 NRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
NRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 216 NRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 275
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+
Sbjct: 276 MGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAV 335
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 336 DPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 373
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + E E+PVG LGRI+N G ID K + R + + AP +
Sbjct: 62 GLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGHPIDMKGDIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSLLQRYQELK 372
>gi|311281703|ref|YP_003943934.1| ATP synthase F1 subunit beta [Enterobacter cloacae SCF1]
gi|308750898|gb|ADO50650.1| ATP synthase F1, beta subunit [Enterobacter cloacae SCF1]
Length = 460
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R +V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLVVNDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKV+DL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSNSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 140/317 (44%), Gaps = 23/317 (7%)
Query: 187 EKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIK 246
E E+PVG LGRI+N GE +D K + + R + + AP + + E L TGIK
Sbjct: 73 EHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNSQELLETGIK 132
Query: 247 SIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVIN 305
+D + P KG + + G GKT ++ I N + ++ +G++ + +
Sbjct: 133 VMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 306 KLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAY 365
++ N +D +V + + TG T+ E FRD G+D L+ D++ ++ A
Sbjct: 193 EMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAG 252
Query: 366 RQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIET 425
++S LL R P V Y + + + + +++I + G++T+ +
Sbjct: 253 TEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKTGSITSVQAVYV 299
Query: 426 LEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVK 480
D+T P + D + L + + PA++ S SR V G Y +
Sbjct: 300 PADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTAR 359
Query: 481 KLSGDIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 360 G----VQSILQRYQELK 372
>gi|407702015|ref|YP_006826802.1| F0F1 ATP synthase subunit beta [Alteromonas macleodii str. 'Black
Sea 11']
gi|407251162|gb|AFT80347.1| F0F1 ATP synthase subunit beta [Alteromonas macleodii str. 'Black
Sea 11']
Length = 461
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G T+G+KR V +TG PI+ PVG TLGRI++VLG+PID G
Sbjct: 43 EVQQQLGGGVVRGIALGTTDGLKRGLAVENTGNPIMVPVGTKTLGRIMDVLGNPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERMSIHREAPSYEDQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY VA V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGQEHYDVARGVQTVLQRYKELKD 374
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 138/312 (44%), Gaps = 23/312 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG + LGRI++ G ID + R ++ + AP D+ S E L TGIK ID +
Sbjct: 79 VPVGTKTLGRIMDVLGNPIDEAGPIGEEERMSIHREAPSYEDQSSSVELLETGIKVIDLV 138
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 139 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMNES 198
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
N +D +V + + TG T+ E FRD G+D L D++ ++ A ++S
Sbjct: 199 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 258
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P V Y L E + +++I + G++T+ + D+
Sbjct: 259 LLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKTGSITSIQAVYVPADDL 305
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P + D + L ++ + PA++ S SR V G Y + +
Sbjct: 306 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDVARG---- 361
Query: 486 IRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 362 VQTVLQRYKELK 373
>gi|398801819|ref|ZP_10561056.1| ATP synthase, F1 beta subunit [Pantoea sp. GM01]
gi|398091255|gb|EJL81704.1| ATP synthase, F1 beta subunit [Pantoea sp. GM01]
Length = 465
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/363 (67%), Positives = 294/363 (80%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + + + + + +KN + + +VQQQ+G +VRTIA G ++G+KR V D KP
Sbjct: 16 VEFPQDAVPQVYSALEVKNGDARLVLEVQQQLGGGVVRTIAMGTSDGLKRGLEVTDLKKP 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSP-----IHTLPPKFSNQIFNNNILETG 669
I PVG TLGRI+NVLG+PID KG++ + S IH P + +Q + +LETG
Sbjct: 76 IQVPVGKATLGRIMNVLGEPIDMKGDLQNDDGSALEVSSIHRAAPSYEDQSNSQELLETG 135
Query: 670 IKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDF 729
IKVIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDF
Sbjct: 136 IKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDF 195
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
YHEM +SNV+DKV+L+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TL
Sbjct: 196 YHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTL 255
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+
Sbjct: 256 AGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPA 315
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLDST+ LSRQIA LGIYPA+DPL+S S+QLDP IVG+EHY VA V+ LQ+Y+E
Sbjct: 316 TTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSLLQRYQE 375
Query: 910 LKD 912
LKD
Sbjct: 376 LKD 378
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 145/333 (43%), Gaps = 28/333 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVE-----KIAPG 230
L +G + +K ++PVG LGRI+N GE ID K + +E + AP
Sbjct: 62 GLKRGLEVTDLKKPIQVPVGKATLGRIMNVLGEPIDMKGDLQNDDGSALEVSSIHRAAPS 121
Query: 231 IMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICI 289
D+ + E L TGIK ID M P KG + + G GKT ++ I N + +
Sbjct: 122 YEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSV 181
Query: 290 YVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQ 349
+ +G++ + +++ N +D +V + + TG T+ E FRD G+
Sbjct: 182 FAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 241
Query: 350 DCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKI 409
D L+ D++ ++ A ++S LL R P V Y L E + +++I
Sbjct: 242 DVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERI 288
Query: 410 FNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSR 348
Query: 470 -----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + ++ +L +Y+EL+
Sbjct: 349 QLDPLIVGQEHYDVARG----VQSLLQRYQELK 377
>gi|374623118|ref|ZP_09695634.1| F0F1 ATP synthase subunit alpha [Ectothiorhodospira sp. PHS-1]
gi|373942235|gb|EHQ52780.1| F0F1 ATP synthase subunit alpha [Ectothiorhodospira sp. PHS-1]
Length = 513
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/404 (58%), Positives = 306/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D K++ +G CT +I E+PVG LLGR+VNS G ID K K+ +EKI
Sbjct: 73 AVVLGDYKHIKEGDTARCTGRILEVPVGEALLGRVVNSLGLAIDGKGAIETKHSSPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR+SV++P+ TG+K+ID+M+PIG+GQRELIIGDRQTGKT +A+D IINQK +
Sbjct: 133 APGVIDRKSVDQPVQTGLKAIDAMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGTGIK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK SS+ NV+ KL+ + MD+T++VAATA+DSAA QYI+PY GC +GEYFRD
Sbjct: 193 CIYVAVGQKASSIANVVRKLEEHGAMDHTIIVAATASDSAAMQYIAPYAGCAMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++E
Sbjct: 253 GEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERASRVNAEYVEAF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPAIN GL
Sbjct: 313 TNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAINAGL 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G +R+ LAQYREL +FS+F+SDLD T+ QL G+++ LMK
Sbjct: 373 SVSRVGGAAQTKIIKKLGGGVRLALAQYRELAAFSQFASDLDEATRRQLERGQRVMELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK + SI E+ L + + + +K++ FE + Y R
Sbjct: 433 QKQYAPLSIAEMGFSLYAAEQGYLDDVEVKKVVDFEHALHDYLR 476
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 154/342 (45%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ IK TG+ + PVG+ LGR++N LG ID KG I +K SPI
Sbjct: 71 VGAVVLGDYKHIKEGDTARCTGRILEVPVGEALLGRVVNSLGLAIDGKGAIETKHSSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P ++ + ++TG+K ID + P +G + + G GKT ++ I I
Sbjct: 131 KIAPGVIDRKSVDQPVQTGLKAIDAMVPIGRGQRELIIGDRQTGKTAVAVDAI----INQ 186
Query: 711 KGCS---VFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG +++ VG+++ + +++E +D ++ ++ + + G ++
Sbjct: 187 KGTGIKCIYVAVGQKASSIANVVRKLEEHGAMDHTIIVAATASDSAAMQYIAPYAGCAMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A +VS +L R P Y + +L ER S
Sbjct: 247 EYFRDRGEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERASRVNA 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + GI P
Sbjct: 307 EYVEAFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
AI+ S S+ + G K+ + V+ L +Y+EL
Sbjct: 367 AINAGLSVSR-----VGGAAQTKIIKKLGGGVRLALAQYREL 403
>gi|226947193|ref|YP_002802266.1| F0F1 ATP synthase subunit beta [Azotobacter vinelandii DJ]
gi|226722120|gb|ACO81291.1| ATP synthase F1, beta subunit [Azotobacter vinelandii DJ]
Length = 458
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VR+IA G+T G+KR V +TG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRSIAMGSTEGLKRGLNVNNTGAGIAVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P ++ Q N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWTIHRAAPTYAEQAGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNI +EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIVMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 340 SRQLDPLVIGQEHYDTARGVQYVLQRYKELKD 371
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 145/336 (43%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
++ + + L +G T +PVG LGRI++ G ID + R T+ +
Sbjct: 52 SIAMGSTEGLKRGLNVNNTGAGIAVPVGKATLGRIMDVLGNPIDEAGPIGEEERWTIHRA 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP ++ NE L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 112 APTYAEQAGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIVMEHSG 171
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++K N +D +V + + TG T+ E FRD
Sbjct: 172 YSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRD 231
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L+ D++ ++ A ++S LL R P + L E + +
Sbjct: 232 EGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------Q 278
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L ++ + PA++ S
Sbjct: 279 ERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDS 338
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y + ++ +L +Y+EL+
Sbjct: 339 TSRQLDPLVIGQEHYDTARG----VQYVLQRYKELK 370
>gi|37524072|ref|NP_927416.1| F0F1 ATP synthase subunit beta [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|81572787|sp|Q7NA94.1|ATPB_PHOLL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|36783495|emb|CAE12335.1| ATP synthase beta chain [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 460
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/361 (66%), Positives = 294/361 (81%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + + K + + ++N + + +VQQQ+G +VR IA G ++G+ R V D
Sbjct: 13 VVDVEFPQDTVPKVYDALEVQNGEAKLVLEVQQQLGGGVVRCIAMGTSDGLSRGLSVTDL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
G PI PVG TLGRI+NVLG+PID KG+I +++ IH P + + +LETGIK
Sbjct: 73 GHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEERWAIHRPAPSYEELSNSQELLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
V+DL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM +SNVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAG
Sbjct: 193 EMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNVARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 137/313 (43%), Gaps = 23/313 (7%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDS 250
E+PVG LGRI+N GE ID K + R + + AP + + E L TGIK +D
Sbjct: 77 EVPVGKATLGRIMNVLGEPIDMKGDIGEEERWAIHRPAPSYEELSNSQELLETGIKVMDL 136
Query: 251 MIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKY 309
+ P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 137 ICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTD 196
Query: 310 YNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQIS 369
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++S
Sbjct: 197 SNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVS 256
Query: 370 LLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGD 429
LL R P + L E + +++I + G++T+ + D
Sbjct: 257 ALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPADD 303
Query: 430 VTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSG 484
+T P + D + L + + PA++ S SR V G Y + +
Sbjct: 304 LTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNVARG--- 360
Query: 485 DIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 361 -VQSILQRYQELK 372
>gi|417228267|ref|ZP_12030025.1| ATP synthase F1, beta subunit [Escherichia coli 5.0959]
gi|386207602|gb|EII12107.1| ATP synthase F1, beta subunit [Escherichia coli 5.0959]
Length = 460
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLKHPIEVPVGKATLGRIMNVLGEPVDMKGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 138/314 (43%), Gaps = 23/314 (7%)
Query: 190 FEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSID 249
E+PVG LGRI+N GE +D K + + R + + AP + + E L TGIK ID
Sbjct: 76 IEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNSQELLETGIKVID 135
Query: 250 SMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLK 308
M P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 136 LMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMT 195
Query: 309 YYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQI 368
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++
Sbjct: 196 DSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEV 255
Query: 369 SLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEG 428
S LL R P V Y L E + +++I + G++T+ +
Sbjct: 256 SALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPAD 302
Query: 429 DVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLS 483
D+T P + D + L + + PA++ S SR V G Y +
Sbjct: 303 DLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARG-- 360
Query: 484 GDIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 361 --VQSILQRYQELK 372
>gi|114330304|ref|YP_746526.1| F0F1 ATP synthase subunit beta [Nitrosomonas eutropha C91]
gi|122314650|sp|Q0AJB0.1|ATPB1_NITEC RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
synthase F1 sector subunit beta 1; AltName:
Full=F-ATPase subunit beta 1
gi|114307318|gb|ABI58561.1| ATP synthase F1 subcomplex beta subunit [Nitrosomonas eutropha C91]
Length = 460
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/356 (67%), Positives = 292/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E I K + + ++ + +VQQQ+G+ +VRTIA G+++G++R +V +T K I
Sbjct: 17 VEFASEGIPKVYDALVMEGSELTLEVQQQLGDGVVRTIALGSSDGLRRGMMVTNTQKQIS 76
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID GEI ++ PIH P F + +LETGIKVIDL+
Sbjct: 77 VPVGTKTLGRIMDVLGRPIDEMGEIGAESFMPIHRTAPAFDELSASTELLETGIKVIDLI 136
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 137 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 196
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 197 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEAFRDEGRDVLFFVDNIYRYTLAGTEVSA 256
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG+LQERI+S+K G+ITS+QA+YVPADDLTDPSP+TTF HLD
Sbjct: 257 LLGRMPSAVGYQPTLAEEMGRLQERITSSKTGSITSIQAVYVPADDLTDPSPATTFGHLD 316
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+QLDP +VGE+HY A EV+ LQ+YKEL+D
Sbjct: 317 ATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGEDHYNTAREVQQTLQRYKELRD 372
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 159/380 (41%), Gaps = 33/380 (8%)
Query: 132 RCLNQTLNIKFANN--------TVLSGQINGTTGYEEAAAQGFV-AVLIDDLKNLTQGQK 182
+C+ ++++FA+ V+ G T ++ G V + + L +G
Sbjct: 9 QCIGAVIDVEFASEGIPKVYDALVMEGS-ELTLEVQQQLGDGVVRTIALGSSDGLRRGMM 67
Query: 183 CFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLL 242
T+K +PVG + LGRI++ G ID + ++ + + AP + + E L
Sbjct: 68 VTNTQKQISVPVGTKTLGRIMDVLGRPIDEMGEIGAESFMPIHRTAPAFDELSASTELLE 127
Query: 243 TGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLI 301
TGIK ID + P KG + + G GKT ++ I N + ++ +G++
Sbjct: 128 TGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGN 187
Query: 302 NVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKH 361
+ +++K N +D +V + + TG T+ E FRD G+D L D++ ++
Sbjct: 188 DFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEAFRDEGRDVLFFVDNIYRY 247
Query: 362 AWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFP 421
A ++S LL R P + + RL ER I + G++T+
Sbjct: 248 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSSKTGSITSIQ 294
Query: 422 IIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQY 476
+ D+T P D + L ++ + PA++ S SR V G Y
Sbjct: 295 AVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGEDHY 354
Query: 477 KIVKKLSGDIRIMLAQYREL 496
+ +++ L +Y+EL
Sbjct: 355 NTAR----EVQQTLQRYKEL 370
>gi|157163214|ref|YP_001460532.1| F0F1 ATP synthase subunit beta [Escherichia coli HS]
gi|166990368|sp|A8A6J5.1|ATPB_ECOHS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|157068894|gb|ABV08149.1| ATP synthase F1, beta subunit [Escherichia coli HS]
Length = 460
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 62 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|119471627|ref|ZP_01614012.1| F0F1 ATP synthase subunit beta [Alteromonadales bacterium TW-7]
gi|359450296|ref|ZP_09239750.1| F-type H+-transporting ATPase subunit beta [Pseudoalteromonas sp.
BSi20480]
gi|392540080|ref|ZP_10287217.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas marina mano4]
gi|119445406|gb|EAW26693.1| F0F1 ATP synthase subunit beta [Alteromonadales bacterium TW-7]
gi|358043845|dbj|GAA75999.1| F-type H+-transporting ATPase subunit beta [Pseudoalteromonas sp.
BSi20480]
Length = 461
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G T+G++R V +TG+ I PVG TLGRI+NVLG+PID G
Sbjct: 43 EVQQQLGGGVVRTIALGTTDGLRRGAAVSNTGEAIQVPVGKATLGRIMNVLGEPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + + IH P + Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEDRMSIHRAAPSYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RIASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSS 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGQEHYDTARGVQTVLQRYKELKD 374
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T + ++PVG LGRI+N GE ID ++R ++ + AP ++
Sbjct: 63 GLRRGAAVSNTGEAIQVPVGKATLGRIMNVLGEPIDEAGPIGEEDRMSIHRAAPSYEEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 123 SSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 183 ERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 243 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERIASTKT 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDPL 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 350 VIGQEHYDTARG----VQTVLQRYKELK 373
>gi|427801403|ref|ZP_18968980.1| F0F1 ATP synthase subunit beta, partial [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|414062257|gb|EKT43589.1| F0F1 ATP synthase subunit beta, partial [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
Length = 411
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 62 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|406598853|ref|YP_006749983.1| F0F1 ATP synthase subunit beta [Alteromonas macleodii ATCC 27126]
gi|407685777|ref|YP_006800951.1| F0F1 ATP synthase subunit beta [Alteromonas macleodii str. 'English
Channel 673']
gi|406376174|gb|AFS39429.1| F0F1 ATP synthase subunit beta [Alteromonas macleodii ATCC 27126]
gi|407247388|gb|AFT76574.1| F0F1 ATP synthase subunit beta [Alteromonas macleodii str. 'English
Channel 673']
Length = 461
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G T+G+KR V +TG PI+ PVG TLGRI++VLG+PID G
Sbjct: 43 EVQQQLGGGVVRGIALGTTDGLKRGLAVENTGNPIMVPVGTKTLGRIMDVLGNPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERMSIHREAPSYEDQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY VA V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGQEHYDVARGVQTVLQRYKELKD 374
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 137/312 (43%), Gaps = 23/312 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG + LGRI++ G ID + R ++ + AP D+ S E L TGIK ID +
Sbjct: 79 VPVGTKTLGRIMDVLGNPIDEAGPIGEEERMSIHREAPSYEDQSSSVELLETGIKVIDLV 138
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 139 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMNES 198
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
N +D +V + + TG T+ E FRD G+D L D++ ++ A ++S
Sbjct: 199 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 258
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P + L E + +++I + G++T+ + D+
Sbjct: 259 LLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSIQAVYVPADDL 305
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P + D + L ++ + PA++ S SR V G Y + +
Sbjct: 306 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDVARG---- 361
Query: 486 IRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 362 VQTVLQRYKELK 373
>gi|289804513|ref|ZP_06535142.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 426
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/335 (71%), Positives = 284/335 (84%)
Query: 578 SINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDN 637
++ +VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D
Sbjct: 2 AVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDM 61
Query: 638 KGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTV 697
KGEI +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTV
Sbjct: 62 KGEIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTV 121
Query: 698 NMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRL 757
NMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRL
Sbjct: 122 NMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRL 181
Query: 758 RVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGK 817
RVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG
Sbjct: 182 RVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGV 241
Query: 818 LQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPL 877
LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL
Sbjct: 242 LQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPL 301
Query: 878 ESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 302 DSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKD 336
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 25 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 84
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 85 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 144
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 145 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 204
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 205 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 251
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 252 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 311
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 312 VVGQEHYDTARG----VQSILQRYQELK 335
>gi|82779076|ref|YP_405425.1| ATP synthase F0F1 subunit beta [Shigella dysenteriae Sd197]
gi|118573745|sp|Q329S1.1|ATPB_SHIDS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|81243224|gb|ABB63934.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Shigella
dysenteriae Sd197]
Length = 460
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 62 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|309784443|ref|ZP_07679082.1| ATP synthase F1, beta subunit [Shigella dysenteriae 1617]
gi|308927950|gb|EFP73418.1| ATP synthase F1, beta subunit [Shigella dysenteriae 1617]
Length = 435
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 17 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 348
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 37 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 217 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDTARG----VQSILQRYQELK 347
>gi|398926124|ref|ZP_10662285.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM48]
gi|398947777|ref|ZP_10672413.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM33]
gi|426412322|ref|YP_007032421.1| ATP synthase subunit beta [Pseudomonas sp. UW4]
gi|398161689|gb|EJM49916.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM33]
gi|398171161|gb|EJM59072.1| ATP synthase, F1 beta subunit [Pseudomonas sp. GM48]
gi|426270539|gb|AFY22616.1| ATP synthase subunit beta [Pseudomonas sp. UW4]
Length = 458
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V +TG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVNNTGAAISVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P F+ Q N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWGIHRPAPTFAEQAGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G +HY+ A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGNDHYETARGVQYVLQRYKELKD 371
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 141/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLDVNNTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERWGIHRPAPTFAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
NE L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 QGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 346 NVIGNDHYETARG----VQYVLQRYKELK 370
>gi|112791350|gb|ABI21945.1| ATP synthase beta subunit, partial [Klebsiella pneumoniae]
Length = 421
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/338 (70%), Positives = 284/338 (84%)
Query: 575 NNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDP 634
N + + +VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG P
Sbjct: 11 NEVLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGQP 70
Query: 635 IDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVG 694
+D KG+I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVG
Sbjct: 71 VDMKGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVG 130
Query: 695 KTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSG 754
KTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP G
Sbjct: 131 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPG 190
Query: 755 NRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
NRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 191 NRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 250
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+
Sbjct: 251 MGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAV 310
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 311 DPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKD 348
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N G+ +D K + R + + AP +
Sbjct: 37 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGQPVDMKGDIGEEERWAIHRAAPSYEELS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 217 VDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDTARG----VQSILQRYQELK 347
>gi|417125708|ref|ZP_11973669.1| ATP synthase F1, beta subunit [Escherichia coli 97.0246]
gi|386145707|gb|EIG92164.1| ATP synthase F1, beta subunit [Escherichia coli 97.0246]
Length = 460
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 62 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|301019812|ref|ZP_07183955.1| ATP synthase F1, beta subunit [Escherichia coli MS 196-1]
gi|312967858|ref|ZP_07782070.1| ATP synthase F1, beta subunit [Escherichia coli 2362-75]
gi|414578599|ref|ZP_11435762.1| ATP synthase F1, beta subunit [Shigella sonnei 3233-85]
gi|415799828|ref|ZP_11499040.1| ATP synthase F1, beta subunit [Escherichia coli E128010]
gi|415821791|ref|ZP_11510572.1| ATP synthase F1, beta subunit [Escherichia coli OK1180]
gi|415838488|ref|ZP_11520459.1| ATP synthase F1, beta subunit [Escherichia coli RN587/1]
gi|415847971|ref|ZP_11526085.1| ATP synthase F1, beta subunit [Shigella sonnei 53G]
gi|416284449|ref|ZP_11647295.1| ATP synthase beta chain [Shigella boydii ATCC 9905]
gi|417588882|ref|ZP_12239644.1| ATP synthase F1, beta subunit [Escherichia coli STEC_C165-02]
gi|417594209|ref|ZP_12244895.1| ATP synthase F1, beta subunit [Escherichia coli 2534-86]
gi|417615400|ref|ZP_12265849.1| ATP synthase F1, beta subunit [Escherichia coli STEC_EH250]
gi|417675071|ref|ZP_12324499.1| ATP synthase F1, beta subunit [Shigella dysenteriae 155-74]
gi|417684303|ref|ZP_12333643.1| ATP synthase F1, beta subunit [Shigella boydii 3594-74]
gi|417709753|ref|ZP_12358767.1| ATP synthase F1, beta subunit [Shigella flexneri VA-6]
gi|417719703|ref|ZP_12368583.1| ATP synthase F1, beta subunit [Shigella flexneri K-227]
gi|417725420|ref|ZP_12374204.1| ATP synthase F1, beta subunit [Shigella flexneri K-304]
gi|417735856|ref|ZP_12384492.1| ATP synthase F1, beta subunit [Shigella flexneri 2747-71]
gi|417830170|ref|ZP_12476708.1| ATP synthase F1, beta subunit [Shigella flexneri J1713]
gi|418259492|ref|ZP_12882340.1| ATP synthase F1, beta subunit [Shigella flexneri 6603-63]
gi|419020856|ref|ZP_13568153.1| ATP synthase F1, beta subunit [Escherichia coli DEC1E]
gi|419150722|ref|ZP_13695369.1| ATP synthase F1, beta subunit [Escherichia coli DEC6B]
gi|419280511|ref|ZP_13822748.1| ATP synthase F1, beta subunit [Escherichia coli DEC10E]
gi|419362429|ref|ZP_13903635.1| ATP synthase F1, beta subunit [Escherichia coli DEC13D]
gi|419383258|ref|ZP_13924199.1| ATP synthase F1, beta subunit [Escherichia coli DEC14C]
gi|419399141|ref|ZP_13939901.1| ATP synthase F1, beta subunit [Escherichia coli DEC15B]
gi|420300843|ref|ZP_14802886.1| ATP synthase F1, beta subunit [Escherichia coli TW09109]
gi|420322731|ref|ZP_14824549.1| ATP synthase F1, beta subunit [Shigella flexneri 2850-71]
gi|420327924|ref|ZP_14829662.1| ATP synthase F1, beta subunit [Shigella flexneri CCH060]
gi|420333721|ref|ZP_14835356.1| ATP synthase F1, beta subunit [Shigella flexneri K-1770]
gi|420338488|ref|ZP_14840042.1| ATP synthase F1, beta subunit [Shigella flexneri K-315]
gi|420355335|ref|ZP_14856406.1| ATP synthase F1, beta subunit [Shigella boydii 4444-74]
gi|420361141|ref|ZP_14862086.1| ATP synthase F1, beta subunit [Shigella sonnei 3226-85]
gi|420365765|ref|ZP_14866625.1| ATP synthase F1, beta subunit [Shigella sonnei 4822-66]
gi|420393877|ref|ZP_14893121.1| ATP synthase F1, beta subunit [Escherichia coli EPEC C342-62]
gi|421684910|ref|ZP_16124690.1| ATP synthase F1, beta subunit [Shigella flexneri 1485-80]
gi|423727962|ref|ZP_17701747.1| ATP synthase F1, beta subunit [Escherichia coli PA31]
gi|424092881|ref|ZP_17828789.1| ATP synthase F1, beta subunit [Escherichia coli FRIK1996]
gi|424099571|ref|ZP_17834810.1| ATP synthase F1, beta subunit [Escherichia coli FRIK1985]
gi|424452272|ref|ZP_17903901.1| ATP synthase F1, beta subunit [Escherichia coli PA32]
gi|424458437|ref|ZP_17909520.1| ATP synthase F1, beta subunit [Escherichia coli PA33]
gi|424464966|ref|ZP_17915276.1| ATP synthase F1, beta subunit [Escherichia coli PA39]
gi|424489669|ref|ZP_17938192.1| ATP synthase F1, beta subunit [Escherichia coli TW09098]
gi|424528668|ref|ZP_17972364.1| ATP synthase F1, beta subunit [Escherichia coli EC4421]
gi|424559443|ref|ZP_18000822.1| ATP synthase F1, beta subunit [Escherichia coli EC4436]
gi|425100514|ref|ZP_18503235.1| ATP synthase F1, beta subunit [Escherichia coli 3.4870]
gi|425146586|ref|ZP_18546564.1| ATP synthase F1, beta subunit [Escherichia coli 10.0869]
gi|425208653|ref|ZP_18604437.1| ATP synthase F1, beta subunit [Escherichia coli FRIK2001]
gi|425257491|ref|ZP_18649974.1| ATP synthase F1, beta subunit [Escherichia coli CB7326]
gi|425388332|ref|ZP_18771876.1| ATP synthase F1, beta subunit [Escherichia coli EC1866]
gi|425395025|ref|ZP_18778119.1| ATP synthase F1, beta subunit [Escherichia coli EC1868]
gi|425431182|ref|ZP_18811776.1| ATP synthase F1, beta subunit [Escherichia coli 0.1304]
gi|428949588|ref|ZP_19021846.1| ATP synthase F1, beta subunit [Escherichia coli 88.1467]
gi|428961680|ref|ZP_19032946.1| ATP synthase F1, beta subunit [Escherichia coli 89.0511]
gi|428974036|ref|ZP_19044333.1| ATP synthase F1, beta subunit [Escherichia coli 90.0039]
gi|428992375|ref|ZP_19061349.1| ATP synthase F1, beta subunit [Escherichia coli 93.0056]
gi|429017161|ref|ZP_19084024.1| ATP synthase F1, beta subunit [Escherichia coli 95.0943]
gi|429063582|ref|ZP_19127545.1| ATP synthase F1, beta subunit [Escherichia coli 97.0007]
gi|444944162|ref|ZP_21262638.1| ATP synthase F1, beta subunit [Escherichia coli 99.0816]
gi|444955300|ref|ZP_21273357.1| ATP synthase F1, beta subunit [Escherichia coli 99.0848]
gi|444960668|ref|ZP_21278481.1| ATP synthase F1, beta subunit [Escherichia coli 99.1753]
gi|299882071|gb|EFI90282.1| ATP synthase F1, beta subunit [Escherichia coli MS 196-1]
gi|312287419|gb|EFR15327.1| ATP synthase F1, beta subunit [Escherichia coli 2362-75]
gi|320180086|gb|EFW55028.1| ATP synthase beta chain [Shigella boydii ATCC 9905]
gi|323161016|gb|EFZ46935.1| ATP synthase F1, beta subunit [Escherichia coli E128010]
gi|323167006|gb|EFZ52745.1| ATP synthase F1, beta subunit [Shigella sonnei 53G]
gi|323177752|gb|EFZ63336.1| ATP synthase F1, beta subunit [Escherichia coli OK1180]
gi|323189535|gb|EFZ74815.1| ATP synthase F1, beta subunit [Escherichia coli RN587/1]
gi|332084755|gb|EGI89941.1| ATP synthase F1, beta subunit [Shigella dysenteriae 155-74]
gi|332089325|gb|EGI94429.1| ATP synthase F1, beta subunit [Shigella boydii 3594-74]
gi|332751757|gb|EGJ82155.1| ATP synthase F1, beta subunit [Shigella flexneri 2747-71]
gi|332995979|gb|EGK15606.1| ATP synthase F1, beta subunit [Shigella flexneri VA-6]
gi|333013459|gb|EGK32830.1| ATP synthase F1, beta subunit [Shigella flexneri K-304]
gi|333013706|gb|EGK33071.1| ATP synthase F1, beta subunit [Shigella flexneri K-227]
gi|335573401|gb|EGM59758.1| ATP synthase F1, beta subunit [Shigella flexneri J1713]
gi|345331316|gb|EGW63776.1| ATP synthase F1, beta subunit [Escherichia coli 2534-86]
gi|345331881|gb|EGW64340.1| ATP synthase F1, beta subunit [Escherichia coli STEC_C165-02]
gi|345357925|gb|EGW90114.1| ATP synthase F1, beta subunit [Escherichia coli STEC_EH250]
gi|377856817|gb|EHU21676.1| ATP synthase F1, beta subunit [Escherichia coli DEC1E]
gi|377989003|gb|EHV52173.1| ATP synthase F1, beta subunit [Escherichia coli DEC6B]
gi|378123613|gb|EHW85030.1| ATP synthase F1, beta subunit [Escherichia coli DEC10E]
gi|378199001|gb|EHX59470.1| ATP synthase F1, beta subunit [Escherichia coli DEC13D]
gi|378224162|gb|EHX84367.1| ATP synthase F1, beta subunit [Escherichia coli DEC14C]
gi|378240222|gb|EHY00197.1| ATP synthase F1, beta subunit [Escherichia coli DEC15B]
gi|390637370|gb|EIN16920.1| ATP synthase F1, beta subunit [Escherichia coli FRIK1996]
gi|390655895|gb|EIN33803.1| ATP synthase F1, beta subunit [Escherichia coli FRIK1985]
gi|390737092|gb|EIO08403.1| ATP synthase F1, beta subunit [Escherichia coli PA31]
gi|390737623|gb|EIO08907.1| ATP synthase F1, beta subunit [Escherichia coli PA32]
gi|390741204|gb|EIO12288.1| ATP synthase F1, beta subunit [Escherichia coli PA33]
gi|390758718|gb|EIO28151.1| ATP synthase F1, beta subunit [Escherichia coli PA39]
gi|390800151|gb|EIO67258.1| ATP synthase F1, beta subunit [Escherichia coli TW09098]
gi|390805214|gb|EIO72162.1| ATP synthase F1, beta subunit [Escherichia coli TW09109]
gi|390847822|gb|EIP11343.1| ATP synthase F1, beta subunit [Escherichia coli EC4421]
gi|390880364|gb|EIP41050.1| ATP synthase F1, beta subunit [Escherichia coli EC4436]
gi|391244710|gb|EIQ03989.1| ATP synthase F1, beta subunit [Shigella flexneri 2850-71]
gi|391244877|gb|EIQ04154.1| ATP synthase F1, beta subunit [Shigella flexneri K-1770]
gi|391245589|gb|EIQ04856.1| ATP synthase F1, beta subunit [Shigella flexneri CCH060]
gi|391257803|gb|EIQ16911.1| ATP synthase F1, beta subunit [Shigella flexneri K-315]
gi|391272881|gb|EIQ31713.1| ATP synthase F1, beta subunit [Shigella boydii 4444-74]
gi|391277669|gb|EIQ36403.1| ATP synthase F1, beta subunit [Shigella sonnei 3226-85]
gi|391280859|gb|EIQ39521.1| ATP synthase F1, beta subunit [Shigella sonnei 3233-85]
gi|391291800|gb|EIQ50172.1| ATP synthase F1, beta subunit [Shigella sonnei 4822-66]
gi|391309956|gb|EIQ67619.1| ATP synthase F1, beta subunit [Escherichia coli EPEC C342-62]
gi|397894359|gb|EJL10805.1| ATP synthase F1, beta subunit [Shigella flexneri 6603-63]
gi|404335303|gb|EJZ61774.1| ATP synthase F1, beta subunit [Shigella flexneri 1485-80]
gi|408118990|gb|EKH50095.1| ATP synthase F1, beta subunit [Escherichia coli FRIK2001]
gi|408170428|gb|EKH97627.1| ATP synthase F1, beta subunit [Escherichia coli CB7326]
gi|408303859|gb|EKJ21307.1| ATP synthase F1, beta subunit [Escherichia coli EC1868]
gi|408304761|gb|EKJ22183.1| ATP synthase F1, beta subunit [Escherichia coli EC1866]
gi|408342352|gb|EKJ56781.1| ATP synthase F1, beta subunit [Escherichia coli 0.1304]
gi|408545610|gb|EKK23037.1| ATP synthase F1, beta subunit [Escherichia coli 3.4870]
gi|408588513|gb|EKK63086.1| ATP synthase F1, beta subunit [Escherichia coli 10.0869]
gi|427201777|gb|EKV72146.1| ATP synthase F1, beta subunit [Escherichia coli 89.0511]
gi|427204955|gb|EKV75217.1| ATP synthase F1, beta subunit [Escherichia coli 88.1467]
gi|427224513|gb|EKV93221.1| ATP synthase F1, beta subunit [Escherichia coli 90.0039]
gi|427238506|gb|EKW06023.1| ATP synthase F1, beta subunit [Escherichia coli 93.0056]
gi|427257683|gb|EKW23801.1| ATP synthase F1, beta subunit [Escherichia coli 95.0943]
gi|427311104|gb|EKW73322.1| ATP synthase F1, beta subunit [Escherichia coli 97.0007]
gi|444554516|gb|ELV32075.1| ATP synthase F1, beta subunit [Escherichia coli 99.0816]
gi|444559350|gb|ELV36579.1| ATP synthase F1, beta subunit [Escherichia coli 99.0848]
gi|444568998|gb|ELV45636.1| ATP synthase F1, beta subunit [Escherichia coli 99.1753]
Length = 435
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 17 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 348
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 37 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 217 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDTARG----VQSILQRYQELK 347
>gi|77166520|ref|YP_345045.1| F0F1 ATP synthase subunit beta [Nitrosococcus oceani ATCC 19707]
gi|254435893|ref|ZP_05049400.1| ATP synthase F1, beta subunit [Nitrosococcus oceani AFC27]
gi|118573708|sp|Q3J6N1.1|ATPB_NITOC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|76884834|gb|ABA59515.1| ATP synthase F1 subcomplex beta subunit [Nitrosococcus oceani ATCC
19707]
gi|207089004|gb|EDZ66276.1| ATP synthase F1, beta subunit [Nitrosococcus oceani AFC27]
Length = 458
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/356 (67%), Positives = 290/356 (81%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E +I K + + + + +VQQQ+G+ +VRTIA G ++G++R V +TG PI
Sbjct: 16 VEFPRESIPKVYHALRIDDVGLTLEVQQQLGDGVVRTIAMGGSDGLRRGMAVTNTGAPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG+P+D G + +++ IH P + +LETGIKVIDL+
Sbjct: 76 VPVGTKTLGRIMDVLGEPVDEAGPVGEEERWSIHRKAPAYEELSPATELLETGIKVIDLI 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
VLDKVSL+YGQMNEP GNRLRVALTGL++AE FR G+DVLLF+DNIYR+TLAGTEVSA
Sbjct: 196 QVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEFFREEGRDVLLFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSRQIAELGIYPA+DPL+S S+QLDP IVG+EHY+VA V+ LQ+YKELKD
Sbjct: 316 ATVVLSRQIAELGIYPAVDPLDSTSRQLDPLIVGQEHYQVARAVQGNLQRYKELKD 371
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG + LGRI++ GE +D + R ++ + AP +
Sbjct: 60 GLRRGMAVTNTGAPISVPVGTKTLGRIMDVLGEPVDEAGPVGEEERWSIHRKAPAYEELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N ++ ++ +G
Sbjct: 120 PATELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K +D +V + + TG T+ E+FR+ G+D L+
Sbjct: 180 ERTREGNDFYHEMKDSQVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEFFREEGRDVLLF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 240 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 287 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y++ + + G+ L +Y+EL+
Sbjct: 347 IVGQEHYQVARAVQGN----LQRYKELK 370
>gi|415773900|ref|ZP_11486447.1| ATP synthase F1, beta subunit [Escherichia coli 3431]
gi|420382851|ref|ZP_14882278.1| ATP synthase F1, beta subunit [Shigella dysenteriae 225-75]
gi|424553240|ref|ZP_17995052.1| ATP synthase F1, beta subunit [Escherichia coli EC4439]
gi|425122081|ref|ZP_18523756.1| ATP synthase F1, beta subunit [Escherichia coli 8.0569]
gi|425195800|ref|ZP_18592556.1| ATP synthase F1, beta subunit [Escherichia coli NE1487]
gi|429029081|ref|ZP_19095042.1| ATP synthase F1, beta subunit [Escherichia coli 96.0427]
gi|429069790|ref|ZP_19133215.1| ATP synthase F1, beta subunit [Escherichia coli 99.0672]
gi|315618560|gb|EFU99146.1| ATP synthase F1, beta subunit [Escherichia coli 3431]
gi|390875170|gb|EIP36250.1| ATP synthase F1, beta subunit [Escherichia coli EC4439]
gi|391297887|gb|EIQ55920.1| ATP synthase F1, beta subunit [Shigella dysenteriae 225-75]
gi|408105973|gb|EKH38105.1| ATP synthase F1, beta subunit [Escherichia coli NE1487]
gi|408564826|gb|EKK40927.1| ATP synthase F1, beta subunit [Escherichia coli 8.0569]
gi|427275118|gb|EKW39742.1| ATP synthase F1, beta subunit [Escherichia coli 96.0427]
gi|427315700|gb|EKW77687.1| ATP synthase F1, beta subunit [Escherichia coli 99.0672]
Length = 429
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 11 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 70
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 71 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 130
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 131 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 190
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 191 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 250
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 251 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 310
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 311 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 342
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 31 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 90
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 91 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 150
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 151 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 210
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 211 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 257
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 258 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 317
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 318 VVGQEHYDTARG----VQSILQRYQELK 341
>gi|50123428|ref|YP_052595.1| ATP synthase F0F1 subunit beta [Pectobacterium atrosepticum
SCRI1043]
gi|81826953|sp|Q6CYJ5.1|ATPB_ERWCT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|49613954|emb|CAG77407.1| ATP synthase beta chain [Pectobacterium atrosepticum SCRI1043]
Length = 460
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/361 (67%), Positives = 295/361 (81%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + + K + + ++N + +VQQQ+G IVR IA G+++G++R V +
Sbjct: 13 VVDVEFPQDAVPKVYDALEVENGAEKLVLEVQQQLGGGIVRCIAMGSSDGLRRGLNVNNL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
G PI PVG TLGRI+NVLGDPID KG+I +++ IH P + + +LETGIK
Sbjct: 73 GHPIEVPVGKATLGRIMNVLGDPIDMKGDIGEEERWAIHRSAPSYEELSNSQELLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
VIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM +SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAG
Sbjct: 193 EMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 137/314 (43%), Gaps = 23/314 (7%)
Query: 190 FEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSID 249
E+PVG LGRI+N G+ ID K + R + + AP + + E L TGIK ID
Sbjct: 76 IEVPVGKATLGRIMNVLGDPIDMKGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVID 135
Query: 250 SMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLK 308
M P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 136 LMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMT 195
Query: 309 YYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQI 368
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++
Sbjct: 196 DSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEV 255
Query: 369 SLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEG 428
S LL R P + L E + +++I + G++T+ +
Sbjct: 256 SALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPAD 302
Query: 429 DVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLS 483
D+T P + D + L + + PA++ S SR V G Y + +
Sbjct: 303 DLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARG-- 360
Query: 484 GDIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 361 --VQSILQRYQELK 372
>gi|417265024|ref|ZP_12052403.1| ATP synthase F1, beta subunit [Escherichia coli 2.3916]
gi|386221206|gb|EII43650.1| ATP synthase F1, beta subunit [Escherichia coli 2.3916]
Length = 435
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 17 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 348
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 37 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 217 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDTARG----VQSILQRYQELK 347
>gi|15804332|ref|NP_290371.1| ATP synthase F0F1 subunit beta [Escherichia coli O157:H7 str.
EDL933]
gi|15833928|ref|NP_312701.1| ATP synthase F0F1 subunit beta [Escherichia coli O157:H7 str.
Sakai]
gi|16131600|ref|NP_418188.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
coli str. K-12 substr. MG1655]
gi|24115035|ref|NP_709545.1| ATP synthase F0F1 subunit beta [Shigella flexneri 2a str. 301]
gi|26250476|ref|NP_756516.1| F0F1 ATP synthase subunit beta [Escherichia coli CFT073]
gi|30064963|ref|NP_839134.1| F0F1 ATP synthase subunit beta [Shigella flexneri 2a str. 2457T]
gi|74314242|ref|YP_312661.1| ATP synthase F0F1 subunit beta [Shigella sonnei Ss046]
gi|82546107|ref|YP_410054.1| F0F1 ATP synthase subunit beta [Shigella boydii Sb227]
gi|91213257|ref|YP_543243.1| ATP synthase F0F1 subunit beta [Escherichia coli UTI89]
gi|110644073|ref|YP_671803.1| ATP synthase F0F1 subunit beta [Escherichia coli 536]
gi|110807556|ref|YP_691076.1| ATP synthase F0F1 subunit beta [Shigella flexneri 5 str. 8401]
gi|117626005|ref|YP_859328.1| F0F1 ATP synthase subunit beta [Escherichia coli APEC O1]
gi|157156404|ref|YP_001465223.1| ATP synthase F0F1 subunit beta [Escherichia coli E24377A]
gi|168748538|ref|ZP_02773560.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
EC4113]
gi|168753634|ref|ZP_02778641.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
EC4401]
gi|168759932|ref|ZP_02784939.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
EC4501]
gi|168766232|ref|ZP_02791239.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
EC4486]
gi|168772219|ref|ZP_02797226.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
EC4196]
gi|168779967|ref|ZP_02804974.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
EC4076]
gi|168786575|ref|ZP_02811582.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC869]
gi|168798780|ref|ZP_02823787.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC508]
gi|170022231|ref|YP_001727185.1| F0F1 ATP synthase subunit beta [Escherichia coli ATCC 8739]
gi|170083233|ref|YP_001732553.1| F0F1 ATP synthase subunit beta [Escherichia coli str. K-12 substr.
DH10B]
gi|170681189|ref|YP_001746062.1| F0F1 ATP synthase subunit beta [Escherichia coli SMS-3-5]
gi|170766683|ref|ZP_02901136.1| ATP synthase F1, beta subunit [Escherichia albertii TW07627]
gi|187732921|ref|YP_001882431.1| F0F1 ATP synthase subunit beta [Shigella boydii CDC 3083-94]
gi|188493678|ref|ZP_03000948.1| ATP synthase F1, beta subunit [Escherichia coli 53638]
gi|191165806|ref|ZP_03027644.1| ATP synthase F1, beta subunit [Escherichia coli B7A]
gi|191170404|ref|ZP_03031957.1| ATP synthase F1, beta subunit [Escherichia coli F11]
gi|193063774|ref|ZP_03044861.1| ATP synthase F1, beta subunit [Escherichia coli E22]
gi|193069207|ref|ZP_03050164.1| ATP synthase F1, beta subunit [Escherichia coli E110019]
gi|194428061|ref|ZP_03060605.1| ATP synthase F1, beta subunit [Escherichia coli B171]
gi|194431044|ref|ZP_03063337.1| ATP synthase F1, beta subunit [Shigella dysenteriae 1012]
gi|194435783|ref|ZP_03067886.1| ATP synthase F1, beta subunit [Escherichia coli 101-1]
gi|195936359|ref|ZP_03081741.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str.
EC4024]
gi|208807011|ref|ZP_03249348.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
EC4206]
gi|208812092|ref|ZP_03253421.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
EC4045]
gi|208818898|ref|ZP_03259218.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
EC4042]
gi|209400614|ref|YP_002273260.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str.
EC4115]
gi|209921213|ref|YP_002295297.1| F0F1 ATP synthase subunit beta [Escherichia coli SE11]
gi|215489070|ref|YP_002331501.1| ATP synthase F0F1 subunit beta [Escherichia coli O127:H6 str.
E2348/69]
gi|217324652|ref|ZP_03440736.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
TW14588]
gi|218551266|ref|YP_002385058.1| F0F1 ATP synthase subunit beta [Escherichia fergusonii ATCC 35469]
gi|218556303|ref|YP_002389217.1| F0F1 ATP synthase subunit beta [Escherichia coli IAI1]
gi|218560807|ref|YP_002393720.1| F0F1 ATP synthase subunit beta [Escherichia coli S88]
gi|218692020|ref|YP_002400232.1| F0F1 ATP synthase subunit beta [Escherichia coli ED1a]
gi|218697458|ref|YP_002405125.1| ATP synthase F0F1 subunit beta [Escherichia coli 55989]
gi|218702582|ref|YP_002410211.1| F0F1 ATP synthase subunit beta [Escherichia coli IAI39]
gi|218707378|ref|YP_002414897.1| F0F1 ATP synthase subunit beta [Escherichia coli UMN026]
gi|222158440|ref|YP_002558579.1| ATP synthase subunit beta [Escherichia coli LF82]
gi|227883954|ref|ZP_04001759.1| H(+)-transporting two-sector ATPase [Escherichia coli 83972]
gi|237703533|ref|ZP_04534014.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia sp.
3_2_53FAA]
gi|238902823|ref|YP_002928619.1| F0F1 ATP synthase subunit beta [Escherichia coli BW2952]
gi|251786997|ref|YP_003001301.1| ATP synthase, F1 complex, beta subunit, subunit of beta subunit
complex, ATP synthase, F1 complex and ATP synthase
[Escherichia coli BL21(DE3)]
gi|253775633|ref|YP_003038464.1| F0F1 ATP synthase subunit beta [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163684|ref|YP_003046792.1| F0F1 ATP synthase subunit beta [Escherichia coli B str. REL606]
gi|254290434|ref|YP_003056182.1| F0F1 ATP synthase subunit beta [Escherichia coli BL21(DE3)]
gi|254795738|ref|YP_003080575.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str.
TW14359]
gi|260846483|ref|YP_003224261.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD
[Escherichia coli O103:H2 str. 12009]
gi|260857853|ref|YP_003231744.1| ATP synthase F0F1 subunit beta [Escherichia coli O26:H11 str.
11368]
gi|260870466|ref|YP_003236868.1| F1 sector of membrane-bound ATP synthase subunit beta AtpD
[Escherichia coli O111:H- str. 11128]
gi|261225889|ref|ZP_05940170.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
coli O157:H7 str. FRIK2000]
gi|261258934|ref|ZP_05951467.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD
[Escherichia coli O157:H7 str. FRIK966]
gi|291285156|ref|YP_003501974.1| ATP synthase subunit beta [Escherichia coli O55:H7 str. CB9615]
gi|293407369|ref|ZP_06651291.1| ATP synthase subunit beta [Escherichia coli FVEC1412]
gi|293413182|ref|ZP_06655848.1| ATP synthase F1 [Escherichia coli B354]
gi|293417205|ref|ZP_06659832.1| ATP synthase F1 [Escherichia coli B185]
gi|293464058|ref|ZP_06664472.1| ATP synthase F1 [Escherichia coli B088]
gi|298383111|ref|ZP_06992706.1| ATP synthase subunit beta [Escherichia coli FVEC1302]
gi|300815013|ref|ZP_07095238.1| ATP synthase F1, beta subunit [Escherichia coli MS 107-1]
gi|300824558|ref|ZP_07104668.1| ATP synthase F1, beta subunit [Escherichia coli MS 119-7]
gi|300896061|ref|ZP_07114620.1| ATP synthase F1, beta subunit [Escherichia coli MS 198-1]
gi|300902986|ref|ZP_07120929.1| ATP synthase F1, beta subunit [Escherichia coli MS 84-1]
gi|300925562|ref|ZP_07141435.1| ATP synthase F1, beta subunit [Escherichia coli MS 182-1]
gi|300940918|ref|ZP_07155444.1| ATP synthase F1, beta subunit [Escherichia coli MS 21-1]
gi|300950648|ref|ZP_07164543.1| ATP synthase F1, beta subunit [Escherichia coli MS 116-1]
gi|300958740|ref|ZP_07170857.1| ATP synthase F1, beta subunit [Escherichia coli MS 175-1]
gi|300983828|ref|ZP_07176770.1| ATP synthase F1, beta subunit [Escherichia coli MS 200-1]
gi|300984354|ref|ZP_07176960.1| ATP synthase F1, beta subunit [Escherichia coli MS 45-1]
gi|301020868|ref|ZP_07184927.1| ATP synthase F1, beta subunit [Escherichia coli MS 69-1]
gi|301047555|ref|ZP_07194627.1| ATP synthase F1, beta subunit [Escherichia coli MS 185-1]
gi|301305619|ref|ZP_07211709.1| ATP synthase F1, beta subunit [Escherichia coli MS 124-1]
gi|301324967|ref|ZP_07218522.1| ATP synthase F1, beta subunit [Escherichia coli MS 78-1]
gi|301644408|ref|ZP_07244407.1| ATP synthase F1, beta subunit [Escherichia coli MS 146-1]
gi|306815916|ref|ZP_07450054.1| F0F1 ATP synthase subunit beta [Escherichia coli NC101]
gi|307313196|ref|ZP_07592821.1| ATP synthase F1, beta subunit [Escherichia coli W]
gi|309795711|ref|ZP_07690126.1| ATP synthase F1, beta subunit [Escherichia coli MS 145-7]
gi|331644459|ref|ZP_08345588.1| ATP synthase F1, beta subunit [Escherichia coli H736]
gi|331649558|ref|ZP_08350644.1| ATP synthase F1, beta subunit [Escherichia coli M605]
gi|331655394|ref|ZP_08356393.1| ATP synthase F1, beta subunit [Escherichia coli M718]
gi|331660076|ref|ZP_08361014.1| ATP synthase F1, beta subunit [Escherichia coli TA206]
gi|331665386|ref|ZP_08366287.1| ATP synthase F1, beta subunit [Escherichia coli TA143]
gi|331670582|ref|ZP_08371421.1| ATP synthase F1, beta subunit [Escherichia coli TA271]
gi|331675219|ref|ZP_08375972.1| ATP synthase F1, beta subunit [Escherichia coli TA280]
gi|331679836|ref|ZP_08380506.1| ATP synthase F1, beta subunit [Escherichia coli H591]
gi|331685459|ref|ZP_08386045.1| ATP synthase F1, beta subunit [Escherichia coli H299]
gi|332282473|ref|ZP_08394886.1| F1 sector of membrane-bound ATP synthase beta subunit [Shigella sp.
D9]
gi|366159322|ref|ZP_09459184.1| F0F1 ATP synthase subunit beta [Escherichia sp. TW09308]
gi|378715335|ref|YP_005280228.1| ATP synthase F1 subunit beta [Escherichia coli KO11FL]
gi|383180965|ref|YP_005458970.1| F0F1 ATP synthase subunit beta [Shigella sonnei 53G]
gi|384545343|ref|YP_005729407.1| ATP synthase subunit beta [Shigella flexneri 2002017]
gi|386282592|ref|ZP_10060239.1| ATP synthase subunit beta [Escherichia sp. 4_1_40B]
gi|386597722|ref|YP_006094122.1| ATP synthase F1 subunit beta [Escherichia coli DH1]
gi|386601769|ref|YP_006103275.1| ATP synthase F1 subunit beta [Escherichia coli IHE3034]
gi|386606322|ref|YP_006112622.1| F0F1 ATP synthase subunit beta [Escherichia coli UM146]
gi|386611125|ref|YP_006126611.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
coli W]
gi|386616553|ref|YP_006136219.1| ATP synthase F1, beta subunit AtpD [Escherichia coli UMNK88]
gi|386621416|ref|YP_006140996.1| ATP synthase subunit beta [Escherichia coli NA114]
gi|386626634|ref|YP_006146362.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
coli O7:K1 str. CE10]
gi|386631677|ref|YP_006151397.1| F0F1 ATP synthase subunit beta [Escherichia coli str. 'clone D i2']
gi|386636597|ref|YP_006156316.1| F0F1 ATP synthase subunit beta [Escherichia coli str. 'clone D
i14']
gi|386641379|ref|YP_006108177.1| ATP synthase subunit beta [Escherichia coli ABU 83972]
gi|386699247|ref|YP_006163084.1| F0F1 ATP synthase subunit beta [Escherichia coli KO11FL]
gi|386707010|ref|YP_006170857.1| ATP synthase subunit beta [Escherichia coli P12b]
gi|386711653|ref|YP_006175374.1| F0F1 ATP synthase subunit beta [Escherichia coli W]
gi|387509191|ref|YP_006161447.1| F0F1 ATP synthase subunit beta [Escherichia coli O55:H7 str.
RM12579]
gi|387609546|ref|YP_006098402.1| ATP synthase subunit beta [Escherichia coli 042]
gi|387614444|ref|YP_006117560.1| ATP synthase subunit beta [Escherichia coli ETEC H10407]
gi|387619037|ref|YP_006122059.1| F0F1 ATP synthase subunit beta [Escherichia coli O83:H1 str. NRG
857C]
gi|387623393|ref|YP_006131021.1| ATP synthase subunit beta [Escherichia coli DH1]
gi|387831633|ref|YP_003351570.1| ATP synthase beta subunit [Escherichia coli SE15]
gi|387884970|ref|YP_006315272.1| F0F1 ATP synthase subunit beta [Escherichia coli Xuzhou21]
gi|388479505|ref|YP_491697.1| F1 sector of membrane-bound ATP synthase subunit beta [Escherichia
coli str. K-12 substr. W3110]
gi|404377136|ref|ZP_10982276.1| ATP synthase subunit beta [Escherichia sp. 1_1_43]
gi|407466747|ref|YP_006786811.1| F0F1 ATP synthase subunit beta [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407484528|ref|YP_006781678.1| F0F1 ATP synthase subunit beta [Escherichia coli O104:H4 str.
2011C-3493]
gi|410485074|ref|YP_006772620.1| F0F1 ATP synthase subunit beta [Escherichia coli O104:H4 str.
2009EL-2050]
gi|415785899|ref|ZP_11493250.1| ATP synthase F1, beta subunit [Escherichia coli EPECa14]
gi|415858239|ref|ZP_11532809.1| ATP synthase F1, beta subunit [Shigella flexneri 2a str. 2457T]
gi|415864774|ref|ZP_11537746.1| ATP synthase F1, beta subunit [Escherichia coli MS 85-1]
gi|416270112|ref|ZP_11642702.1| ATP synthase beta chain [Shigella dysenteriae CDC 74-1112]
gi|416295168|ref|ZP_11651089.1| ATP synthase beta chain [Shigella flexneri CDC 796-83]
gi|416313629|ref|ZP_11658346.1| ATP synthase beta chain [Escherichia coli O157:H7 str. 1044]
gi|416319808|ref|ZP_11662360.1| ATP synthase beta chain [Escherichia coli O157:H7 str. EC1212]
gi|416328569|ref|ZP_11668238.1| ATP synthase beta chain [Escherichia coli O157:H7 str. 1125]
gi|416338053|ref|ZP_11674287.1| ATP synthase beta chain [Escherichia coli WV_060327]
gi|416341985|ref|ZP_11676351.1| ATP synthase beta chain [Escherichia coli EC4100B]
gi|416778624|ref|ZP_11876021.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str.
G5101]
gi|416789884|ref|ZP_11880861.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H- str.
493-89]
gi|416801770|ref|ZP_11885802.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H- str. H
2687]
gi|416812624|ref|ZP_11890723.1| F0F1 ATP synthase subunit beta [Escherichia coli O55:H7 str.
3256-97]
gi|416823045|ref|ZP_11895342.1| F0F1 ATP synthase subunit beta [Escherichia coli O55:H7 str. USDA
5905]
gi|416833397|ref|ZP_11900335.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str.
LSU-61]
gi|416900273|ref|ZP_11929584.1| ATP synthase F1, beta subunit [Escherichia coli STEC_7v]
gi|417116534|ref|ZP_11967395.1| ATP synthase F1, beta subunit [Escherichia coli 1.2741]
gi|417133150|ref|ZP_11977935.1| ATP synthase F1, beta subunit [Escherichia coli 5.0588]
gi|417142183|ref|ZP_11984758.1| ATP synthase F1, beta subunit [Escherichia coli 97.0259]
gi|417149520|ref|ZP_11989611.1| ATP synthase F1, beta subunit [Escherichia coli 1.2264]
gi|417157326|ref|ZP_11994950.1| ATP synthase F1, beta subunit [Escherichia coli 96.0497]
gi|417169189|ref|ZP_12001444.1| ATP synthase F1, beta subunit [Escherichia coli 99.0741]
gi|417176626|ref|ZP_12006422.1| ATP synthase F1, beta subunit [Escherichia coli 3.2608]
gi|417185469|ref|ZP_12010870.1| ATP synthase F1, beta subunit [Escherichia coli 93.0624]
gi|417201733|ref|ZP_12017983.1| ATP synthase F1, beta subunit [Escherichia coli 4.0522]
gi|417209936|ref|ZP_12021038.1| ATP synthase F1, beta subunit [Escherichia coli JB1-95]
gi|417222434|ref|ZP_12025874.1| ATP synthase F1, beta subunit [Escherichia coli 96.154]
gi|417245926|ref|ZP_12039422.1| ATP synthase F1, beta subunit [Escherichia coli 9.0111]
gi|417249770|ref|ZP_12041554.1| ATP synthase F1, beta subunit [Escherichia coli 4.0967]
gi|417270123|ref|ZP_12057483.1| ATP synthase F1, beta subunit [Escherichia coli 3.3884]
gi|417273365|ref|ZP_12060712.1| ATP synthase F1, beta subunit [Escherichia coli 2.4168]
gi|417279243|ref|ZP_12066553.1| ATP synthase F1, beta subunit [Escherichia coli 3.2303]
gi|417282495|ref|ZP_12069795.1| ATP synthase F1, beta subunit [Escherichia coli 3003]
gi|417285189|ref|ZP_12072480.1| ATP synthase F1, beta subunit [Escherichia coli TW07793]
gi|417293968|ref|ZP_12081247.1| ATP synthase F1, beta subunit [Escherichia coli B41]
gi|417296493|ref|ZP_12083740.1| ATP synthase F1, beta subunit [Escherichia coli 900105 (10e)]
gi|417310321|ref|ZP_12097136.1| ATP synthase subunit beta [Escherichia coli PCN033]
gi|417583362|ref|ZP_12234161.1| ATP synthase F1, beta subunit [Escherichia coli STEC_B2F1]
gi|417599177|ref|ZP_12249801.1| ATP synthase F1, beta subunit [Escherichia coli 3030-1]
gi|417604648|ref|ZP_12255210.1| ATP synthase F1, beta subunit [Escherichia coli STEC_94C]
gi|417610495|ref|ZP_12260986.1| ATP synthase F1, beta subunit [Escherichia coli STEC_DG131-3]
gi|417620413|ref|ZP_12270814.1| ATP synthase F1, beta subunit [Escherichia coli G58-1]
gi|417631185|ref|ZP_12281419.1| ATP synthase F1, beta subunit [Escherichia coli STEC_MHI813]
gi|417636691|ref|ZP_12286898.1| ATP synthase F1, beta subunit [Escherichia coli STEC_S1191]
gi|417641760|ref|ZP_12291884.1| ATP synthase F1, beta subunit [Escherichia coli TX1999]
gi|417664371|ref|ZP_12313950.1| ATP synthase beta chain [Escherichia coli AA86]
gi|417669326|ref|ZP_12318863.1| ATP synthase F1, beta subunit [Escherichia coli STEC_O31]
gi|417692228|ref|ZP_12341430.1| ATP synthase F1, beta subunit [Shigella boydii 5216-82]
gi|417714710|ref|ZP_12363661.1| ATP synthase F1, beta subunit [Shigella flexneri K-272]
gi|417730677|ref|ZP_12379360.1| ATP synthase F1, beta subunit [Shigella flexneri K-671]
gi|417740704|ref|ZP_12389270.1| ATP synthase F1, beta subunit [Shigella flexneri 4343-70]
gi|417758168|ref|ZP_12406229.1| ATP synthase F1, beta subunit [Escherichia coli DEC2B]
gi|417807423|ref|ZP_12454352.1| F0F1 ATP synthase subunit beta [Escherichia coli O104:H4 str.
LB226692]
gi|417835163|ref|ZP_12481602.1| F0F1 ATP synthase subunit beta [Escherichia coli O104:H4 str.
01-09591]
gi|417866365|ref|ZP_12511407.1| atpD [Escherichia coli O104:H4 str. C227-11]
gi|417947235|ref|ZP_12590431.1| F0F1 ATP synthase subunit beta [Escherichia coli XH140A]
gi|417976520|ref|ZP_12617313.1| F0F1 ATP synthase subunit beta [Escherichia coli XH001]
gi|418040361|ref|ZP_12678605.1| F0F1 ATP synthase subunit beta [Escherichia coli W26]
gi|418269691|ref|ZP_12887960.1| ATP synthase F1, beta subunit [Shigella sonnei str. Moseley]
gi|418942944|ref|ZP_13496181.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H43 str. T22]
gi|418955857|ref|ZP_13507790.1| F0F1 ATP synthase subunit beta [Escherichia coli J53]
gi|419004548|ref|ZP_13552056.1| ATP synthase F1, beta subunit [Escherichia coli DEC1B]
gi|419010230|ref|ZP_13557638.1| ATP synthase F1, beta subunit [Escherichia coli DEC1C]
gi|419015930|ref|ZP_13563264.1| ATP synthase F1, beta subunit [Escherichia coli DEC1D]
gi|419026309|ref|ZP_13573522.1| ATP synthase F1, beta subunit [Escherichia coli DEC2A]
gi|419031458|ref|ZP_13578598.1| ATP synthase F1, beta subunit [Escherichia coli DEC2C]
gi|419037036|ref|ZP_13584107.1| ATP synthase F1, beta subunit [Escherichia coli DEC2D]
gi|419042157|ref|ZP_13589172.1| ATP synthase F1, beta subunit [Escherichia coli DEC2E]
gi|419047889|ref|ZP_13594818.1| ATP synthase F1, beta subunit [Escherichia coli DEC3A]
gi|419053618|ref|ZP_13600484.1| ATP synthase F1, beta subunit [Escherichia coli DEC3B]
gi|419059576|ref|ZP_13606376.1| ATP synthase F1, beta subunit [Escherichia coli DEC3C]
gi|419065130|ref|ZP_13611837.1| ATP synthase F1, beta subunit [Escherichia coli DEC3D]
gi|419072083|ref|ZP_13617682.1| ATP synthase F1, beta subunit [Escherichia coli DEC3E]
gi|419077920|ref|ZP_13623417.1| ATP synthase F1, beta subunit [Escherichia coli DEC3F]
gi|419083060|ref|ZP_13628502.1| ATP synthase F1, beta subunit [Escherichia coli DEC4A]
gi|419088927|ref|ZP_13634278.1| ATP synthase F1, beta subunit [Escherichia coli DEC4B]
gi|419094857|ref|ZP_13640132.1| ATP synthase F1, beta subunit [Escherichia coli DEC4C]
gi|419100633|ref|ZP_13645819.1| ATP synthase F1, beta subunit [Escherichia coli DEC4D]
gi|419106463|ref|ZP_13651584.1| ATP synthase F1, beta subunit [Escherichia coli DEC4E]
gi|419111845|ref|ZP_13656896.1| ATP synthase F1, beta subunit [Escherichia coli DEC4F]
gi|419117303|ref|ZP_13662311.1| ATP synthase F1, beta subunit [Escherichia coli DEC5A]
gi|419123118|ref|ZP_13668057.1| ATP synthase F1, beta subunit [Escherichia coli DEC5B]
gi|419128539|ref|ZP_13673408.1| ATP synthase F1, beta subunit [Escherichia coli DEC5C]
gi|419133961|ref|ZP_13678785.1| ATP synthase F1, beta subunit [Escherichia coli DEC5D]
gi|419139104|ref|ZP_13683894.1| ATP synthase F1, beta subunit [Escherichia coli DEC5E]
gi|419144850|ref|ZP_13689577.1| ATP synthase F1, beta subunit [Escherichia coli DEC6A]
gi|419156256|ref|ZP_13700811.1| ATP synthase F1, beta subunit [Escherichia coli DEC6C]
gi|419161611|ref|ZP_13706101.1| ATP synthase F1, beta subunit [Escherichia coli DEC6D]
gi|419172701|ref|ZP_13716573.1| ATP synthase F1, beta subunit [Escherichia coli DEC7A]
gi|419177441|ref|ZP_13721248.1| ATP synthase F1, beta subunit [Escherichia coli DEC7B]
gi|419183263|ref|ZP_13726869.1| ATP synthase F1, beta subunit [Escherichia coli DEC7C]
gi|419188844|ref|ZP_13732348.1| ATP synthase F1, beta subunit [Escherichia coli DEC7D]
gi|419199524|ref|ZP_13742812.1| ATP synthase F1, beta subunit [Escherichia coli DEC8A]
gi|419205899|ref|ZP_13749053.1| ATP synthase F1, beta subunit [Escherichia coli DEC8B]
gi|419212260|ref|ZP_13755323.1| ATP synthase F1, beta subunit [Escherichia coli DEC8C]
gi|419216756|ref|ZP_13759755.1| ATP synthase F1, beta subunit [Escherichia coli DEC8D]
gi|419223929|ref|ZP_13766838.1| ATP synthase F1, beta subunit [Escherichia coli DEC8E]
gi|419229350|ref|ZP_13772184.1| ATP synthase F1, beta subunit [Escherichia coli DEC9A]
gi|419234994|ref|ZP_13777758.1| ATP synthase F1, beta subunit [Escherichia coli DEC9B]
gi|419240214|ref|ZP_13782916.1| ATP synthase F1, beta subunit [Escherichia coli DEC9C]
gi|419245838|ref|ZP_13788468.1| ATP synthase F1, beta subunit [Escherichia coli DEC9D]
gi|419251576|ref|ZP_13794140.1| ATP synthase F1, beta subunit [Escherichia coli DEC9E]
gi|419257465|ref|ZP_13799961.1| ATP synthase F1, beta subunit [Escherichia coli DEC10A]
gi|419263592|ref|ZP_13805995.1| ATP synthase F1, beta subunit [Escherichia coli DEC10B]
gi|419269635|ref|ZP_13811975.1| ATP synthase F1, beta subunit [Escherichia coli DEC10C]
gi|419274980|ref|ZP_13817265.1| ATP synthase F1, beta subunit [Escherichia coli DEC10D]
gi|419286692|ref|ZP_13828850.1| ATP synthase F1, beta subunit [Escherichia coli DEC10F]
gi|419291956|ref|ZP_13834039.1| ATP synthase F1, beta subunit [Escherichia coli DEC11A]
gi|419297236|ref|ZP_13839271.1| ATP synthase F1, beta subunit [Escherichia coli DEC11B]
gi|419302829|ref|ZP_13844820.1| ATP synthase F1, beta subunit [Escherichia coli DEC11C]
gi|419308772|ref|ZP_13850661.1| ATP synthase F1, beta subunit [Escherichia coli DEC11D]
gi|419313795|ref|ZP_13855653.1| ATP synthase F1, beta subunit [Escherichia coli DEC11E]
gi|419319237|ref|ZP_13861032.1| ATP synthase F1, beta subunit [Escherichia coli DEC12A]
gi|419325426|ref|ZP_13867108.1| ATP synthase F1, beta subunit [Escherichia coli DEC12B]
gi|419331455|ref|ZP_13873047.1| ATP synthase F1, beta subunit [Escherichia coli DEC12C]
gi|419336869|ref|ZP_13878380.1| ATP synthase F1, beta subunit [Escherichia coli DEC12D]
gi|419342325|ref|ZP_13883778.1| ATP synthase F1, beta subunit [Escherichia coli DEC12E]
gi|419347520|ref|ZP_13888887.1| ATP synthase F1, beta subunit [Escherichia coli DEC13A]
gi|419351982|ref|ZP_13893309.1| ATP synthase F1, beta subunit [Escherichia coli DEC13B]
gi|419357455|ref|ZP_13898701.1| ATP synthase F1, beta subunit [Escherichia coli DEC13C]
gi|419367364|ref|ZP_13908513.1| ATP synthase F1, beta subunit [Escherichia coli DEC13E]
gi|419372530|ref|ZP_13913634.1| ATP synthase F1, beta subunit [Escherichia coli DEC14A]
gi|419377867|ref|ZP_13918882.1| ATP synthase F1, beta subunit [Escherichia coli DEC14B]
gi|419388503|ref|ZP_13929368.1| ATP synthase F1, beta subunit [Escherichia coli DEC14D]
gi|419393931|ref|ZP_13934727.1| ATP synthase F1, beta subunit [Escherichia coli DEC15A]
gi|419404386|ref|ZP_13945103.1| ATP synthase F1, beta subunit [Escherichia coli DEC15C]
gi|419409550|ref|ZP_13950232.1| ATP synthase F1, beta subunit [Escherichia coli DEC15D]
gi|419415108|ref|ZP_13955740.1| ATP synthase F1, beta subunit [Escherichia coli DEC15E]
gi|419702581|ref|ZP_14230173.1| F0F1 ATP synthase subunit beta [Escherichia coli SCI-07]
gi|419810812|ref|ZP_14335691.1| F0F1 ATP synthase subunit beta [Escherichia coli O32:H37 str. P4]
gi|419865829|ref|ZP_14388205.1| F0F1 ATP synthase subunit beta [Escherichia coli O103:H25 str.
CVM9340]
gi|419872434|ref|ZP_14394471.1| F0F1 ATP synthase subunit beta [Escherichia coli O103:H2 str.
CVM9450]
gi|419874505|ref|ZP_14396430.1| F0F1 ATP synthase subunit beta [Escherichia coli O111:H11 str.
CVM9534]
gi|419881799|ref|ZP_14403097.1| F0F1 ATP synthase subunit beta [Escherichia coli O111:H11 str.
CVM9545]
gi|419891778|ref|ZP_14411820.1| F0F1 ATP synthase subunit beta [Escherichia coli O111:H8 str.
CVM9570]
gi|419897488|ref|ZP_14417073.1| F0F1 ATP synthase subunit beta [Escherichia coli O111:H8 str.
CVM9574]
gi|419899373|ref|ZP_14418887.1| F0F1 ATP synthase subunit beta [Escherichia coli O26:H11 str.
CVM9942]
gi|419910995|ref|ZP_14429500.1| hypothetical protein ECO10026_26403 [Escherichia coli O26:H11 str.
CVM10026]
gi|419911459|ref|ZP_14429941.1| F0F1 ATP synthase subunit beta [Escherichia coli KD1]
gi|419917736|ref|ZP_14435963.1| F0F1 ATP synthase subunit beta [Escherichia coli KD2]
gi|419926384|ref|ZP_14444158.1| F0F1 ATP synthase subunit beta [Escherichia coli 541-15]
gi|419929263|ref|ZP_14446946.1| F0F1 ATP synthase subunit beta [Escherichia coli 541-1]
gi|419934297|ref|ZP_14451436.1| F0F1 ATP synthase subunit beta [Escherichia coli 576-1]
gi|419937720|ref|ZP_14454578.1| F0F1 ATP synthase subunit beta [Escherichia coli 75]
gi|419943727|ref|ZP_14460240.1| F0F1 ATP synthase subunit beta [Escherichia coli HM605]
gi|419949536|ref|ZP_14465777.1| F0F1 ATP synthase subunit beta [Escherichia coli CUMT8]
gi|420091333|ref|ZP_14603083.1| F0F1 ATP synthase subunit beta [Escherichia coli O111:H8 str.
CVM9602]
gi|420097887|ref|ZP_14609176.1| F0F1 ATP synthase subunit beta [Escherichia coli O111:H8 str.
CVM9634]
gi|420101067|ref|ZP_14612202.1| F0F1 ATP synthase subunit beta [Escherichia coli O111:H11 str.
CVM9455]
gi|420106598|ref|ZP_14616997.1| F0F1 ATP synthase subunit beta [Escherichia coli O111:H11 str.
CVM9553]
gi|420112558|ref|ZP_14622356.1| F0F1 ATP synthase subunit beta [Escherichia coli O26:H11 str.
CVM10021]
gi|420124333|ref|ZP_14633192.1| F0F1 ATP synthase subunit beta [Escherichia coli O26:H11 str.
CVM10030]
gi|420125206|ref|ZP_14634030.1| F0F1 ATP synthase subunit beta [Escherichia coli O26:H11 str.
CVM10224]
gi|420135559|ref|ZP_14643642.1| F0F1 ATP synthase subunit beta [Escherichia coli O26:H11 str.
CVM9952]
gi|420272117|ref|ZP_14774465.1| ATP synthase F1, beta subunit [Escherichia coli PA22]
gi|420277872|ref|ZP_14780151.1| ATP synthase F1, beta subunit [Escherichia coli PA40]
gi|420282902|ref|ZP_14785134.1| ATP synthase F1, beta subunit [Escherichia coli TW06591]
gi|420289344|ref|ZP_14791525.1| ATP synthase F1, beta subunit [Escherichia coli TW10246]
gi|420295012|ref|ZP_14797119.1| ATP synthase F1, beta subunit [Escherichia coli TW11039]
gi|420306786|ref|ZP_14808772.1| ATP synthase F1, beta subunit [Escherichia coli TW10119]
gi|420312005|ref|ZP_14813931.1| ATP synthase F1, beta subunit [Escherichia coli EC1738]
gi|420317821|ref|ZP_14819690.1| ATP synthase F1, beta subunit [Escherichia coli EC1734]
gi|420349761|ref|ZP_14851132.1| ATP synthase F1, beta subunit [Shigella boydii 965-58]
gi|420388099|ref|ZP_14887430.1| ATP synthase F1, beta subunit [Escherichia coli EPECa12]
gi|421777098|ref|ZP_16213697.1| F0F1 ATP synthase subunit beta [Escherichia coli AD30]
gi|421814794|ref|ZP_16250494.1| ATP synthase F1, beta subunit [Escherichia coli 8.0416]
gi|421820535|ref|ZP_16256019.1| ATP synthase F1, beta subunit [Escherichia coli 10.0821]
gi|421827344|ref|ZP_16262690.1| ATP synthase F1, beta subunit [Escherichia coli FRIK920]
gi|421833375|ref|ZP_16268653.1| ATP synthase F1, beta subunit [Escherichia coli PA7]
gi|422335073|ref|ZP_16416075.1| ATP synthase subunit beta [Escherichia coli 4_1_47FAA]
gi|422353548|ref|ZP_16434299.1| ATP synthase F1, beta subunit [Escherichia coli MS 117-3]
gi|422360659|ref|ZP_16441288.1| ATP synthase F1, beta subunit [Escherichia coli MS 110-3]
gi|422364450|ref|ZP_16444968.1| ATP synthase F1, beta subunit [Escherichia coli MS 153-1]
gi|422371369|ref|ZP_16451750.1| ATP synthase F1, beta subunit [Escherichia coli MS 16-3]
gi|422375925|ref|ZP_16456183.1| ATP synthase F1, beta subunit [Escherichia coli MS 60-1]
gi|422380766|ref|ZP_16460940.1| ATP synthase F1, beta subunit [Escherichia coli MS 57-2]
gi|422751590|ref|ZP_16805499.1| ATP synthase F1 [Escherichia coli H252]
gi|422756568|ref|ZP_16810390.1| ATP synthase F1 [Escherichia coli H263]
gi|422764078|ref|ZP_16817830.1| ATP synthase F1 [Escherichia coli E1167]
gi|422768481|ref|ZP_16822205.1| ATP synthase F1 [Escherichia coli E1520]
gi|422773625|ref|ZP_16827308.1| ATP synthase F1 [Escherichia coli E482]
gi|422778323|ref|ZP_16831973.1| ATP synthase F1 [Escherichia coli H120]
gi|422783662|ref|ZP_16836445.1| ATP synthase F1 [Escherichia coli TW10509]
gi|422788601|ref|ZP_16841337.1| ATP synthase F1 [Escherichia coli H489]
gi|422792345|ref|ZP_16845046.1| ATP synthase F1 [Escherichia coli TA007]
gi|422801706|ref|ZP_16850202.1| ATP synthase F1 [Escherichia coli M863]
gi|422807786|ref|ZP_16856215.1| ATP synthase F1 [Escherichia fergusonii B253]
gi|422818899|ref|ZP_16867111.1| ATP synthase subunit beta [Escherichia coli M919]
gi|422831130|ref|ZP_16879279.1| ATP synthase subunit beta [Escherichia coli B093]
gi|422836061|ref|ZP_16884111.1| ATP synthase subunit beta [Escherichia coli E101]
gi|422841779|ref|ZP_16889748.1| ATP synthase subunit beta [Escherichia coli H397]
gi|422961828|ref|ZP_16972564.1| ATP synthase subunit beta [Escherichia coli H494]
gi|422976792|ref|ZP_16977170.1| ATP synthase subunit beta [Escherichia coli TA124]
gi|422990008|ref|ZP_16980780.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. C227-11]
gi|422996906|ref|ZP_16987668.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. C236-11]
gi|423001999|ref|ZP_16992752.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 09-7901]
gi|423005656|ref|ZP_16996401.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 04-8351]
gi|423012217|ref|ZP_17002949.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-3677]
gi|423021443|ref|ZP_17012150.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-4404]
gi|423026605|ref|ZP_17017300.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-4522]
gi|423032433|ref|ZP_17023119.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-4623]
gi|423035306|ref|ZP_17025984.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-4632
C1]
gi|423040428|ref|ZP_17031097.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-4632
C2]
gi|423047113|ref|ZP_17037772.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-4632
C3]
gi|423055652|ref|ZP_17044458.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-4632
C4]
gi|423057655|ref|ZP_17046454.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-4632
C5]
gi|423703265|ref|ZP_17677697.1| ATP synthase subunit beta [Escherichia coli H730]
gi|423708050|ref|ZP_17682430.1| ATP synthase subunit beta [Escherichia coli B799]
gi|424080071|ref|ZP_17817012.1| ATP synthase F1, beta subunit [Escherichia coli FDA505]
gi|424086466|ref|ZP_17822939.1| ATP synthase F1, beta subunit [Escherichia coli FDA517]
gi|424105763|ref|ZP_17840479.1| ATP synthase F1, beta subunit [Escherichia coli FRIK1990]
gi|424112403|ref|ZP_17846615.1| ATP synthase F1, beta subunit [Escherichia coli 93-001]
gi|424118338|ref|ZP_17852158.1| ATP synthase F1, beta subunit [Escherichia coli PA3]
gi|424124537|ref|ZP_17857820.1| ATP synthase F1, beta subunit [Escherichia coli PA5]
gi|424130700|ref|ZP_17863589.1| ATP synthase F1, beta subunit [Escherichia coli PA9]
gi|424137015|ref|ZP_17869436.1| ATP synthase F1, beta subunit [Escherichia coli PA10]
gi|424143570|ref|ZP_17875408.1| ATP synthase F1, beta subunit [Escherichia coli PA14]
gi|424149941|ref|ZP_17881302.1| ATP synthase F1, beta subunit [Escherichia coli PA15]
gi|424163667|ref|ZP_17886720.1| ATP synthase F1, beta subunit [Escherichia coli PA24]
gi|424257062|ref|ZP_17892262.1| ATP synthase F1, beta subunit [Escherichia coli PA25]
gi|424335986|ref|ZP_17898197.1| ATP synthase F1, beta subunit [Escherichia coli PA28]
gi|424471200|ref|ZP_17920983.1| ATP synthase F1, beta subunit [Escherichia coli PA41]
gi|424477691|ref|ZP_17926992.1| ATP synthase F1, beta subunit [Escherichia coli PA42]
gi|424483473|ref|ZP_17932440.1| ATP synthase F1, beta subunit [Escherichia coli TW07945]
gi|424496364|ref|ZP_17943885.1| ATP synthase F1, beta subunit [Escherichia coli TW09195]
gi|424502987|ref|ZP_17949857.1| ATP synthase F1, beta subunit [Escherichia coli EC4203]
gi|424509262|ref|ZP_17955615.1| ATP synthase F1, beta subunit [Escherichia coli EC4196]
gi|424516658|ref|ZP_17961230.1| ATP synthase F1, beta subunit [Escherichia coli TW14313]
gi|424522794|ref|ZP_17966884.1| ATP synthase F1, beta subunit [Escherichia coli TW14301]
gi|424534808|ref|ZP_17978142.1| ATP synthase F1, beta subunit [Escherichia coli EC4422]
gi|424540863|ref|ZP_17983792.1| ATP synthase F1, beta subunit [Escherichia coli EC4013]
gi|424547042|ref|ZP_17989360.1| ATP synthase F1, beta subunit [Escherichia coli EC4402]
gi|424565765|ref|ZP_18006752.1| ATP synthase F1, beta subunit [Escherichia coli EC4437]
gi|424571889|ref|ZP_18012410.1| ATP synthase F1, beta subunit [Escherichia coli EC4448]
gi|424578050|ref|ZP_18018069.1| ATP synthase F1, beta subunit [Escherichia coli EC1845]
gi|424583873|ref|ZP_18023504.1| ATP synthase F1, beta subunit [Escherichia coli EC1863]
gi|424752840|ref|ZP_18180808.1| F0F1 ATP synthase subunit beta [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424758824|ref|ZP_18186500.1| F0F1 ATP synthase subunit beta [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424770751|ref|ZP_18197939.1| F0F1 ATP synthase subunit beta [Escherichia coli O111:H8 str.
CFSAN001632]
gi|424818518|ref|ZP_18243669.1| F0F1 ATP synthase subunit beta [Escherichia fergusonii ECD227]
gi|424839934|ref|ZP_18264571.1| F0F1 ATP synthase subunit beta [Shigella flexneri 5a str. M90T]
gi|425106620|ref|ZP_18508922.1| ATP synthase F1, beta subunit [Escherichia coli 5.2239]
gi|425112622|ref|ZP_18514529.1| ATP synthase F1, beta subunit [Escherichia coli 6.0172]
gi|425117351|ref|ZP_18519128.1| ATP synthase F1, beta subunit [Escherichia coli 8.0566]
gi|425128553|ref|ZP_18529708.1| ATP synthase F1, beta subunit [Escherichia coli 8.0586]
gi|425134320|ref|ZP_18535157.1| ATP synthase F1, beta subunit [Escherichia coli 8.2524]
gi|425140913|ref|ZP_18541280.1| ATP synthase F1, beta subunit [Escherichia coli 10.0833]
gi|425152700|ref|ZP_18552301.1| ATP synthase F1, beta subunit [Escherichia coli 88.0221]
gi|425158603|ref|ZP_18557851.1| ATP synthase F1, beta subunit [Escherichia coli PA34]
gi|425164919|ref|ZP_18563793.1| ATP synthase F1, beta subunit [Escherichia coli FDA506]
gi|425170667|ref|ZP_18569127.1| ATP synthase F1, beta subunit [Escherichia coli FDA507]
gi|425176712|ref|ZP_18574818.1| ATP synthase F1, beta subunit [Escherichia coli FDA504]
gi|425182773|ref|ZP_18580455.1| ATP synthase F1, beta subunit [Escherichia coli FRIK1999]
gi|425189069|ref|ZP_18586326.1| ATP synthase F1, beta subunit [Escherichia coli FRIK1997]
gi|425202274|ref|ZP_18598470.1| ATP synthase F1, beta subunit [Escherichia coli NE037]
gi|425214412|ref|ZP_18609801.1| ATP synthase F1, beta subunit [Escherichia coli PA4]
gi|425220540|ref|ZP_18615489.1| ATP synthase F1, beta subunit [Escherichia coli PA23]
gi|425227182|ref|ZP_18621636.1| ATP synthase F1, beta subunit [Escherichia coli PA49]
gi|425233343|ref|ZP_18627369.1| ATP synthase F1, beta subunit [Escherichia coli PA45]
gi|425239264|ref|ZP_18632971.1| ATP synthase F1, beta subunit [Escherichia coli TT12B]
gi|425245497|ref|ZP_18638791.1| ATP synthase F1, beta subunit [Escherichia coli MA6]
gi|425251690|ref|ZP_18644620.1| ATP synthase F1, beta subunit [Escherichia coli 5905]
gi|425263750|ref|ZP_18655727.1| ATP synthase F1, beta subunit [Escherichia coli EC96038]
gi|425269740|ref|ZP_18661352.1| ATP synthase F1, beta subunit [Escherichia coli 5412]
gi|425275034|ref|ZP_18666414.1| ATP synthase F1, beta subunit [Escherichia coli TW15901]
gi|425280192|ref|ZP_18671405.1| ATP synthase F1, beta subunit [Escherichia coli ARS4.2123]
gi|425285612|ref|ZP_18676625.1| ATP synthase F1, beta subunit [Escherichia coli TW00353]
gi|425297213|ref|ZP_18687328.1| ATP synthase F1, beta subunit [Escherichia coli PA38]
gi|425302639|ref|ZP_18692518.1| ATP synthase F1, beta subunit [Escherichia coli 07798]
gi|425307547|ref|ZP_18697211.1| ATP synthase F1, beta subunit [Escherichia coli N1]
gi|425313911|ref|ZP_18703064.1| ATP synthase F1, beta subunit [Escherichia coli EC1735]
gi|425319892|ref|ZP_18708655.1| ATP synthase F1, beta subunit [Escherichia coli EC1736]
gi|425326030|ref|ZP_18714343.1| ATP synthase F1, beta subunit [Escherichia coli EC1737]
gi|425332344|ref|ZP_18720143.1| ATP synthase F1, beta subunit [Escherichia coli EC1846]
gi|425338520|ref|ZP_18725845.1| ATP synthase F1, beta subunit [Escherichia coli EC1847]
gi|425344812|ref|ZP_18731688.1| ATP synthase F1, beta subunit [Escherichia coli EC1848]
gi|425350653|ref|ZP_18737099.1| ATP synthase F1, beta subunit [Escherichia coli EC1849]
gi|425356927|ref|ZP_18742974.1| ATP synthase F1, beta subunit [Escherichia coli EC1850]
gi|425362876|ref|ZP_18748509.1| ATP synthase F1, beta subunit [Escherichia coli EC1856]
gi|425369141|ref|ZP_18754205.1| ATP synthase F1, beta subunit [Escherichia coli EC1862]
gi|425375445|ref|ZP_18760070.1| ATP synthase F1, beta subunit [Escherichia coli EC1864]
gi|425382077|ref|ZP_18766060.1| ATP synthase F1, beta subunit [Escherichia coli EC1865]
gi|425401116|ref|ZP_18783807.1| ATP synthase F1, beta subunit [Escherichia coli EC1869]
gi|425407212|ref|ZP_18789418.1| ATP synthase F1, beta subunit [Escherichia coli EC1870]
gi|425413570|ref|ZP_18795317.1| ATP synthase F1, beta subunit [Escherichia coli NE098]
gi|425419884|ref|ZP_18801141.1| ATP synthase F1, beta subunit [Escherichia coli FRIK523]
gi|425424752|ref|ZP_18805900.1| ATP synthase F1, beta subunit [Escherichia coli 0.1288]
gi|427806937|ref|ZP_18974004.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Escherichia
coli chi7122]
gi|427811526|ref|ZP_18978591.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Escherichia
coli]
gi|428955660|ref|ZP_19027437.1| ATP synthase F1, beta subunit [Escherichia coli 88.1042]
gi|428968286|ref|ZP_19038977.1| ATP synthase F1, beta subunit [Escherichia coli 90.0091]
gi|428980479|ref|ZP_19050275.1| ATP synthase F1, beta subunit [Escherichia coli 90.2281]
gi|428986142|ref|ZP_19055517.1| ATP synthase F1, beta subunit [Escherichia coli 93.0055]
gi|428998270|ref|ZP_19066849.1| ATP synthase F1, beta subunit [Escherichia coli 94.0618]
gi|429004659|ref|ZP_19072705.1| ATP synthase F1, beta subunit [Escherichia coli 95.0183]
gi|429010681|ref|ZP_19078068.1| ATP synthase F1, beta subunit [Escherichia coli 95.1288]
gi|429022950|ref|ZP_19089453.1| ATP synthase F1, beta subunit [Escherichia coli 96.0428]
gi|429035226|ref|ZP_19100735.1| ATP synthase F1, beta subunit [Escherichia coli 96.0939]
gi|429041334|ref|ZP_19106409.1| ATP synthase F1, beta subunit [Escherichia coli 96.0932]
gi|429047179|ref|ZP_19111877.1| ATP synthase F1, beta subunit [Escherichia coli 96.0107]
gi|429052514|ref|ZP_19117072.1| ATP synthase F1, beta subunit [Escherichia coli 97.0003]
gi|429058076|ref|ZP_19122322.1| ATP synthase F1, beta subunit [Escherichia coli 97.1742]
gi|429075569|ref|ZP_19138813.1| ATP synthase F1, beta subunit [Escherichia coli 99.0678]
gi|429080768|ref|ZP_19143895.1| ATP synthase F1, beta subunit [Escherichia coli 99.0713]
gi|429721488|ref|ZP_19256403.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec11-9450]
gi|429773381|ref|ZP_19305396.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-02030]
gi|429778746|ref|ZP_19310712.1| ATP synthase subunit beta [Escherichia coli O104:H4 str.
11-02033-1]
gi|429782581|ref|ZP_19314506.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-02092]
gi|429787974|ref|ZP_19319861.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-02093]
gi|429793793|ref|ZP_19325635.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-02281]
gi|429800373|ref|ZP_19332162.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-02318]
gi|429803985|ref|ZP_19335742.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-02913]
gi|429808633|ref|ZP_19340349.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-03439]
gi|429814332|ref|ZP_19346003.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-04080]
gi|429819535|ref|ZP_19351165.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-03943]
gi|429828996|ref|ZP_19359977.1| ATP synthase F1, beta subunit [Escherichia coli 96.0109]
gi|429835456|ref|ZP_19365689.1| ATP synthase F1, beta subunit [Escherichia coli 97.0010]
gi|429905855|ref|ZP_19371831.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec11-9990]
gi|429909988|ref|ZP_19375950.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec11-9941]
gi|429915888|ref|ZP_19381834.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec11-4984]
gi|429920936|ref|ZP_19386863.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec11-5604]
gi|429926744|ref|ZP_19392655.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec11-4986]
gi|429930676|ref|ZP_19396575.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec11-4987]
gi|429937218|ref|ZP_19403103.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec11-4988]
gi|429942896|ref|ZP_19408768.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec11-5603]
gi|429945575|ref|ZP_19411435.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec11-6006]
gi|429953138|ref|ZP_19418983.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec12-0465]
gi|429956485|ref|ZP_19422315.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec12-0466]
gi|432355780|ref|ZP_19599041.1| ATP synthase subunit beta [Escherichia coli KTE2]
gi|432360197|ref|ZP_19603409.1| ATP synthase subunit beta [Escherichia coli KTE4]
gi|432364997|ref|ZP_19608151.1| ATP synthase subunit beta [Escherichia coli KTE5]
gi|432367218|ref|ZP_19610332.1| ATP synthase subunit beta [Escherichia coli KTE10]
gi|432374312|ref|ZP_19617343.1| ATP synthase subunit beta [Escherichia coli KTE11]
gi|432378975|ref|ZP_19621956.1| ATP synthase subunit beta [Escherichia coli KTE12]
gi|432383640|ref|ZP_19626565.1| ATP synthase subunit beta [Escherichia coli KTE15]
gi|432389548|ref|ZP_19632427.1| ATP synthase subunit beta [Escherichia coli KTE16]
gi|432394412|ref|ZP_19637230.1| ATP synthase subunit beta [Escherichia coli KTE21]
gi|432399690|ref|ZP_19642463.1| ATP synthase subunit beta [Escherichia coli KTE25]
gi|432404145|ref|ZP_19646888.1| ATP synthase subunit beta [Escherichia coli KTE26]
gi|432408813|ref|ZP_19651515.1| ATP synthase subunit beta [Escherichia coli KTE28]
gi|432414008|ref|ZP_19656661.1| ATP synthase subunit beta [Escherichia coli KTE39]
gi|432419266|ref|ZP_19661856.1| ATP synthase subunit beta [Escherichia coli KTE44]
gi|432424148|ref|ZP_19666685.1| ATP synthase subunit beta [Escherichia coli KTE178]
gi|432428413|ref|ZP_19670893.1| ATP synthase subunit beta [Escherichia coli KTE181]
gi|432433968|ref|ZP_19676391.1| ATP synthase subunit beta [Escherichia coli KTE187]
gi|432438700|ref|ZP_19681077.1| ATP synthase subunit beta [Escherichia coli KTE188]
gi|432443275|ref|ZP_19685608.1| ATP synthase subunit beta [Escherichia coli KTE189]
gi|432448420|ref|ZP_19690715.1| ATP synthase subunit beta [Escherichia coli KTE191]
gi|432452005|ref|ZP_19694259.1| ATP synthase subunit beta [Escherichia coli KTE193]
gi|432458886|ref|ZP_19701060.1| ATP synthase subunit beta [Escherichia coli KTE201]
gi|432463112|ref|ZP_19705243.1| ATP synthase subunit beta [Escherichia coli KTE204]
gi|432468077|ref|ZP_19710154.1| ATP synthase subunit beta [Escherichia coli KTE205]
gi|432473097|ref|ZP_19715133.1| ATP synthase subunit beta [Escherichia coli KTE206]
gi|432478109|ref|ZP_19720094.1| ATP synthase subunit beta [Escherichia coli KTE208]
gi|432483158|ref|ZP_19725105.1| ATP synthase subunit beta [Escherichia coli KTE210]
gi|432487500|ref|ZP_19729406.1| ATP synthase subunit beta [Escherichia coli KTE212]
gi|432491573|ref|ZP_19733432.1| ATP synthase subunit beta [Escherichia coli KTE213]
gi|432497880|ref|ZP_19739671.1| ATP synthase subunit beta [Escherichia coli KTE214]
gi|432502299|ref|ZP_19744049.1| ATP synthase subunit beta [Escherichia coli KTE216]
gi|432506636|ref|ZP_19748354.1| ATP synthase subunit beta [Escherichia coli KTE220]
gi|432516132|ref|ZP_19753347.1| ATP synthase subunit beta [Escherichia coli KTE224]
gi|432519961|ref|ZP_19757140.1| ATP synthase subunit beta [Escherichia coli KTE228]
gi|432526217|ref|ZP_19763329.1| ATP synthase subunit beta [Escherichia coli KTE230]
gi|432540130|ref|ZP_19777020.1| ATP synthase subunit beta [Escherichia coli KTE235]
gi|432545578|ref|ZP_19782401.1| ATP synthase subunit beta [Escherichia coli KTE236]
gi|432551057|ref|ZP_19787806.1| ATP synthase subunit beta [Escherichia coli KTE237]
gi|432555825|ref|ZP_19792542.1| ATP synthase subunit beta [Escherichia coli KTE47]
gi|432561010|ref|ZP_19797663.1| ATP synthase subunit beta [Escherichia coli KTE49]
gi|432566123|ref|ZP_19802679.1| ATP synthase subunit beta [Escherichia coli KTE51]
gi|432571018|ref|ZP_19807523.1| ATP synthase subunit beta [Escherichia coli KTE53]
gi|432575986|ref|ZP_19812455.1| ATP synthase subunit beta [Escherichia coli KTE55]
gi|432578013|ref|ZP_19814459.1| ATP synthase subunit beta [Escherichia coli KTE56]
gi|432585271|ref|ZP_19821662.1| ATP synthase subunit beta [Escherichia coli KTE57]
gi|432590197|ref|ZP_19826548.1| ATP synthase subunit beta [Escherichia coli KTE58]
gi|432594957|ref|ZP_19831268.1| ATP synthase subunit beta [Escherichia coli KTE60]
gi|432600000|ref|ZP_19836269.1| ATP synthase subunit beta [Escherichia coli KTE62]
gi|432604579|ref|ZP_19840806.1| ATP synthase subunit beta [Escherichia coli KTE66]
gi|432605182|ref|ZP_19841391.1| ATP synthase subunit beta [Escherichia coli KTE67]
gi|432613746|ref|ZP_19849903.1| ATP synthase subunit beta [Escherichia coli KTE72]
gi|432619058|ref|ZP_19855155.1| ATP synthase subunit beta [Escherichia coli KTE75]
gi|432624114|ref|ZP_19860126.1| ATP synthase subunit beta [Escherichia coli KTE76]
gi|432629366|ref|ZP_19865331.1| ATP synthase subunit beta [Escherichia coli KTE77]
gi|432633693|ref|ZP_19869610.1| ATP synthase subunit beta [Escherichia coli KTE80]
gi|432638963|ref|ZP_19874826.1| ATP synthase subunit beta [Escherichia coli KTE81]
gi|432643345|ref|ZP_19879166.1| ATP synthase subunit beta [Escherichia coli KTE83]
gi|432648414|ref|ZP_19884199.1| ATP synthase subunit beta [Escherichia coli KTE86]
gi|432653399|ref|ZP_19889135.1| ATP synthase subunit beta [Escherichia coli KTE87]
gi|432657980|ref|ZP_19893676.1| ATP synthase subunit beta [Escherichia coli KTE93]
gi|432662992|ref|ZP_19898620.1| ATP synthase subunit beta [Escherichia coli KTE111]
gi|432668340|ref|ZP_19903909.1| ATP synthase subunit beta [Escherichia coli KTE116]
gi|432672837|ref|ZP_19908355.1| ATP synthase subunit beta [Escherichia coli KTE119]
gi|432676913|ref|ZP_19912354.1| ATP synthase subunit beta [Escherichia coli KTE142]
gi|432682522|ref|ZP_19917876.1| ATP synthase subunit beta [Escherichia coli KTE143]
gi|432687574|ref|ZP_19922862.1| ATP synthase subunit beta [Escherichia coli KTE156]
gi|432689071|ref|ZP_19924337.1| ATP synthase subunit beta [Escherichia coli KTE161]
gi|432696609|ref|ZP_19931800.1| ATP synthase subunit beta [Escherichia coli KTE162]
gi|432701258|ref|ZP_19936402.1| ATP synthase subunit beta [Escherichia coli KTE169]
gi|432706476|ref|ZP_19941570.1| ATP synthase subunit beta [Escherichia coli KTE171]
gi|432708139|ref|ZP_19943213.1| ATP synthase subunit beta [Escherichia coli KTE6]
gi|432715603|ref|ZP_19950627.1| ATP synthase subunit beta [Escherichia coli KTE8]
gi|432720897|ref|ZP_19955854.1| ATP synthase subunit beta [Escherichia coli KTE9]
gi|432725208|ref|ZP_19960121.1| ATP synthase subunit beta [Escherichia coli KTE17]
gi|432729816|ref|ZP_19964689.1| ATP synthase subunit beta [Escherichia coli KTE18]
gi|432734498|ref|ZP_19969320.1| ATP synthase subunit beta [Escherichia coli KTE45]
gi|432739242|ref|ZP_19973970.1| ATP synthase subunit beta [Escherichia coli KTE42]
gi|432743505|ref|ZP_19978219.1| ATP synthase subunit beta [Escherichia coli KTE23]
gi|432747718|ref|ZP_19982379.1| ATP synthase subunit beta [Escherichia coli KTE43]
gi|432752198|ref|ZP_19986774.1| ATP synthase subunit beta [Escherichia coli KTE29]
gi|432756701|ref|ZP_19991244.1| ATP synthase subunit beta [Escherichia coli KTE22]
gi|432761583|ref|ZP_19996071.1| ATP synthase subunit beta [Escherichia coli KTE46]
gi|432767171|ref|ZP_20001584.1| ATP synthase subunit beta [Escherichia coli KTE48]
gi|432768120|ref|ZP_20002509.1| ATP synthase subunit beta [Escherichia coli KTE50]
gi|432772520|ref|ZP_20006831.1| ATP synthase subunit beta [Escherichia coli KTE54]
gi|432780778|ref|ZP_20014997.1| ATP synthase subunit beta [Escherichia coli KTE59]
gi|432785730|ref|ZP_20019906.1| ATP synthase subunit beta [Escherichia coli KTE63]
gi|432789770|ref|ZP_20023896.1| ATP synthase subunit beta [Escherichia coli KTE65]
gi|432795003|ref|ZP_20029075.1| ATP synthase subunit beta [Escherichia coli KTE78]
gi|432796514|ref|ZP_20030548.1| ATP synthase subunit beta [Escherichia coli KTE79]
gi|432803978|ref|ZP_20037928.1| ATP synthase subunit beta [Escherichia coli KTE84]
gi|432807989|ref|ZP_20041902.1| ATP synthase subunit beta [Escherichia coli KTE91]
gi|432811490|ref|ZP_20045346.1| ATP synthase subunit beta [Escherichia coli KTE101]
gi|432817533|ref|ZP_20051284.1| ATP synthase subunit beta [Escherichia coli KTE115]
gi|432823206|ref|ZP_20056893.1| ATP synthase subunit beta [Escherichia coli KTE118]
gi|432824666|ref|ZP_20058329.1| ATP synthase subunit beta [Escherichia coli KTE123]
gi|432829360|ref|ZP_20062975.1| ATP synthase subunit beta [Escherichia coli KTE135]
gi|432836734|ref|ZP_20070263.1| ATP synthase subunit beta [Escherichia coli KTE136]
gi|432841598|ref|ZP_20075053.1| ATP synthase subunit beta [Escherichia coli KTE140]
gi|432846873|ref|ZP_20079476.1| ATP synthase subunit beta [Escherichia coli KTE141]
gi|432855750|ref|ZP_20083441.1| ATP synthase subunit beta [Escherichia coli KTE144]
gi|432866498|ref|ZP_20088959.1| ATP synthase subunit beta [Escherichia coli KTE146]
gi|432871497|ref|ZP_20091667.1| ATP synthase subunit beta [Escherichia coli KTE147]
gi|432878111|ref|ZP_20095560.1| ATP synthase subunit beta [Escherichia coli KTE154]
gi|432889480|ref|ZP_20102817.1| ATP synthase subunit beta [Escherichia coli KTE158]
gi|432891301|ref|ZP_20104059.1| ATP synthase subunit beta [Escherichia coli KTE165]
gi|432901302|ref|ZP_20111414.1| ATP synthase subunit beta [Escherichia coli KTE192]
gi|432907513|ref|ZP_20115950.1| ATP synthase subunit beta [Escherichia coli KTE194]
gi|432915415|ref|ZP_20120670.1| ATP synthase subunit beta [Escherichia coli KTE190]
gi|432922998|ref|ZP_20125721.1| ATP synthase subunit beta [Escherichia coli KTE173]
gi|432929607|ref|ZP_20130657.1| ATP synthase subunit beta [Escherichia coli KTE175]
gi|432931464|ref|ZP_20131521.1| ATP synthase subunit beta [Escherichia coli KTE184]
gi|432940550|ref|ZP_20138464.1| ATP synthase subunit beta [Escherichia coli KTE183]
gi|432950466|ref|ZP_20144738.1| ATP synthase subunit beta [Escherichia coli KTE196]
gi|432957698|ref|ZP_20149104.1| ATP synthase subunit beta [Escherichia coli KTE197]
gi|432964520|ref|ZP_20153621.1| ATP synthase subunit beta [Escherichia coli KTE202]
gi|432965501|ref|ZP_20154424.1| ATP synthase subunit beta [Escherichia coli KTE203]
gi|432974016|ref|ZP_20162859.1| ATP synthase subunit beta [Escherichia coli KTE207]
gi|432975968|ref|ZP_20164800.1| ATP synthase subunit beta [Escherichia coli KTE209]
gi|432983251|ref|ZP_20172018.1| ATP synthase subunit beta [Escherichia coli KTE211]
gi|432987589|ref|ZP_20176300.1| ATP synthase subunit beta [Escherichia coli KTE215]
gi|432992889|ref|ZP_20181527.1| ATP synthase subunit beta [Escherichia coli KTE217]
gi|432997527|ref|ZP_20186107.1| ATP synthase subunit beta [Escherichia coli KTE218]
gi|433002123|ref|ZP_20190640.1| ATP synthase subunit beta [Escherichia coli KTE223]
gi|433002643|ref|ZP_20191152.1| ATP synthase subunit beta [Escherichia coli KTE227]
gi|433009945|ref|ZP_20198356.1| ATP synthase subunit beta [Escherichia coli KTE229]
gi|433016063|ref|ZP_20204390.1| ATP synthase subunit beta [Escherichia coli KTE104]
gi|433021001|ref|ZP_20209078.1| ATP synthase subunit beta [Escherichia coli KTE105]
gi|433025653|ref|ZP_20213620.1| ATP synthase subunit beta [Escherichia coli KTE106]
gi|433030686|ref|ZP_20218532.1| ATP synthase subunit beta [Escherichia coli KTE109]
gi|433035666|ref|ZP_20223354.1| ATP synthase subunit beta [Escherichia coli KTE112]
gi|433040759|ref|ZP_20228345.1| ATP synthase subunit beta [Escherichia coli KTE113]
gi|433045277|ref|ZP_20232750.1| ATP synthase subunit beta [Escherichia coli KTE117]
gi|433050211|ref|ZP_20237532.1| ATP synthase subunit beta [Escherichia coli KTE120]
gi|433055375|ref|ZP_20242528.1| ATP synthase subunit beta [Escherichia coli KTE122]
gi|433060268|ref|ZP_20247299.1| ATP synthase subunit beta [Escherichia coli KTE124]
gi|433065213|ref|ZP_20252115.1| ATP synthase subunit beta [Escherichia coli KTE125]
gi|433070109|ref|ZP_20256872.1| ATP synthase subunit beta [Escherichia coli KTE128]
gi|433075023|ref|ZP_20261659.1| ATP synthase subunit beta [Escherichia coli KTE129]
gi|433079944|ref|ZP_20266460.1| ATP synthase subunit beta [Escherichia coli KTE131]
gi|433084670|ref|ZP_20271115.1| ATP synthase subunit beta [Escherichia coli KTE133]
gi|433089471|ref|ZP_20275829.1| ATP synthase subunit beta [Escherichia coli KTE137]
gi|433094137|ref|ZP_20280385.1| ATP synthase subunit beta [Escherichia coli KTE138]
gi|433098573|ref|ZP_20284739.1| ATP synthase subunit beta [Escherichia coli KTE139]
gi|433103341|ref|ZP_20289410.1| ATP synthase subunit beta [Escherichia coli KTE145]
gi|433108002|ref|ZP_20293961.1| ATP synthase subunit beta [Escherichia coli KTE148]
gi|433113017|ref|ZP_20298865.1| ATP synthase subunit beta [Escherichia coli KTE150]
gi|433117675|ref|ZP_20303454.1| ATP synthase subunit beta [Escherichia coli KTE153]
gi|433122360|ref|ZP_20308015.1| ATP synthase subunit beta [Escherichia coli KTE157]
gi|433127377|ref|ZP_20312918.1| ATP synthase subunit beta [Escherichia coli KTE160]
gi|433132323|ref|ZP_20317744.1| ATP synthase subunit beta [Escherichia coli KTE163]
gi|433136997|ref|ZP_20322320.1| ATP synthase subunit beta [Escherichia coli KTE166]
gi|433141451|ref|ZP_20326688.1| ATP synthase subunit beta [Escherichia coli KTE167]
gi|433146380|ref|ZP_20331510.1| ATP synthase subunit beta [Escherichia coli KTE168]
gi|433151403|ref|ZP_20336399.1| ATP synthase subunit beta [Escherichia coli KTE174]
gi|433155932|ref|ZP_20340858.1| ATP synthase subunit beta [Escherichia coli KTE176]
gi|433160902|ref|ZP_20345716.1| ATP synthase subunit beta [Escherichia coli KTE177]
gi|433165761|ref|ZP_20350486.1| ATP synthase subunit beta [Escherichia coli KTE179]
gi|433170757|ref|ZP_20355373.1| ATP synthase subunit beta [Escherichia coli KTE180]
gi|433175635|ref|ZP_20360138.1| ATP synthase subunit beta [Escherichia coli KTE232]
gi|433180619|ref|ZP_20364991.1| ATP synthase subunit beta [Escherichia coli KTE82]
gi|433185482|ref|ZP_20369716.1| ATP synthase subunit beta [Escherichia coli KTE85]
gi|433190549|ref|ZP_20374635.1| ATP synthase subunit beta [Escherichia coli KTE88]
gi|433195798|ref|ZP_20379766.1| ATP synthase subunit beta [Escherichia coli KTE90]
gi|433200509|ref|ZP_20384390.1| ATP synthase subunit beta [Escherichia coli KTE94]
gi|433205492|ref|ZP_20389235.1| ATP synthase subunit beta [Escherichia coli KTE95]
gi|433209893|ref|ZP_20393556.1| ATP synthase subunit beta [Escherichia coli KTE97]
gi|433214772|ref|ZP_20398346.1| ATP synthase subunit beta [Escherichia coli KTE99]
gi|433321648|ref|ZP_20399206.1| F0F1 ATP synthase subunit beta [Escherichia coli J96]
gi|442595582|ref|ZP_21013428.1| ATP synthase beta chain [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|442596163|ref|ZP_21013983.1| ATP synthase beta chain [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|442605782|ref|ZP_21020598.1| ATP synthase beta chain [Escherichia coli Nissle 1917]
gi|443619815|ref|YP_007383671.1| F0F1 ATP synthase subunit beta [Escherichia coli APEC O78]
gi|444927480|ref|ZP_21246737.1| ATP synthase F1, beta subunit [Escherichia coli 09BKT078844]
gi|444933092|ref|ZP_21252091.1| ATP synthase F1, beta subunit [Escherichia coli 99.0814]
gi|444938559|ref|ZP_21257283.1| ATP synthase F1, beta subunit [Escherichia coli 99.0815]
gi|444949612|ref|ZP_21267894.1| ATP synthase F1, beta subunit [Escherichia coli 99.0839]
gi|444965908|ref|ZP_21283460.1| ATP synthase F1, beta subunit [Escherichia coli 99.1775]
gi|444971922|ref|ZP_21289253.1| ATP synthase F1, beta subunit [Escherichia coli 99.1793]
gi|444977213|ref|ZP_21294283.1| ATP synthase F1, beta subunit [Escherichia coli 99.1805]
gi|444982558|ref|ZP_21299455.1| ATP synthase F1, beta subunit [Escherichia coli ATCC 700728]
gi|444987968|ref|ZP_21304736.1| ATP synthase F1, beta subunit [Escherichia coli PA11]
gi|444993280|ref|ZP_21309912.1| ATP synthase F1, beta subunit [Escherichia coli PA19]
gi|444998525|ref|ZP_21315015.1| ATP synthase F1, beta subunit [Escherichia coli PA13]
gi|445004070|ref|ZP_21320450.1| ATP synthase F1, beta subunit [Escherichia coli PA2]
gi|445009440|ref|ZP_21325662.1| ATP synthase F1, beta subunit [Escherichia coli PA47]
gi|445014567|ref|ZP_21330663.1| ATP synthase F1, beta subunit [Escherichia coli PA48]
gi|445020489|ref|ZP_21336445.1| ATP synthase F1, beta subunit [Escherichia coli PA8]
gi|445025849|ref|ZP_21341663.1| ATP synthase F1, beta subunit [Escherichia coli 7.1982]
gi|445031307|ref|ZP_21346963.1| ATP synthase F1, beta subunit [Escherichia coli 99.1781]
gi|445036728|ref|ZP_21352246.1| ATP synthase F1, beta subunit [Escherichia coli 99.1762]
gi|445042401|ref|ZP_21357764.1| ATP synthase F1, beta subunit [Escherichia coli PA35]
gi|445047614|ref|ZP_21362852.1| ATP synthase F1, beta subunit [Escherichia coli 3.4880]
gi|445053176|ref|ZP_21368187.1| ATP synthase F1, beta subunit [Escherichia coli 95.0083]
gi|445061218|ref|ZP_21373726.1| ATP synthase F1, beta subunit [Escherichia coli 99.0670]
gi|450195458|ref|ZP_21892527.1| F0F1 ATP synthase subunit beta [Escherichia coli SEPT362]
gi|450225722|ref|ZP_21897457.1| F0F1 ATP synthase subunit beta [Escherichia coli O08]
gi|450252724|ref|ZP_21902215.1| F0F1 ATP synthase subunit beta [Escherichia coli S17]
gi|452967299|ref|ZP_21965526.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str.
EC4009]
gi|81175145|sp|P0ABB6.2|ATPB_ECO57 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|81175146|sp|P0ABB5.2|ATPB_ECOL6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|81175147|sp|P0ABB4.2|ATPB_ECOLI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|81175148|sp|P0ABB7.2|ATPB_SHIFL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|118573529|sp|Q0TAX7.1|ATPB_ECOL5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|118573530|sp|Q1R4K2.1|ATPB_ECOUT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|118573744|sp|Q31UN2.1|ATPB_SHIBS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|118573746|sp|Q3YVN6.1|ATPB_SHISS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|123146532|sp|Q0SYU4.1|ATPB_SHIF8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|166201701|sp|A1AHR4.1|ATPB_ECOK1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|166990367|sp|A7ZTU4.1|ATPB_ECO24 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|189081332|sp|B1IX06.1|ATPB_ECOLC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740192|sp|B7MGF2.1|ATPB_ECO45 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740193|sp|B5YXD6.1|ATPB_ECO5E RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740194|sp|B7NR34.1|ATPB_ECO7I RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740195|sp|B7M588.1|ATPB_ECO8A RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740196|sp|B1X9W0.1|ATPB_ECODH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740197|sp|B7NF48.1|ATPB_ECOLU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740198|sp|B6I3W9.1|ATPB_ECOSE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740199|sp|B1LL59.1|ATPB_ECOSM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740201|sp|B7LK77.1|ATPB_ESCF3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740676|sp|B2TUP3.1|ATPB_SHIB3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|254808149|sp|B7UMJ7.1|ATPB_ECO27 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|254808150|sp|B7L882.1|ATPB_ECO55 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|254808151|sp|B7N2H1.1|ATPB_ECO81 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|259585443|sp|C4ZZ10.1|ATPB_ECOBW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|12518589|gb|AAG58935.1|AE005605_3 membrane-bound ATP synthase, F1 sector, beta-subunit [Escherichia
coli O157:H7 str. EDL933]
gi|26110906|gb|AAN83090.1|AE016769_205 ATP synthase beta chain [Escherichia coli CFT073]
gi|41038|emb|CAA23527.1| unnamed protein product [Escherichia coli]
gi|42277|emb|CAA23594.1| unnamed protein product [Escherichia coli]
gi|146325|gb|AAA83875.1| H+ ATPase F1 beta subunit [Escherichia coli]
gi|148139|gb|AAA24737.1| ATP synthase beta subunit [Escherichia coli]
gi|290581|gb|AAA62084.1| ATP synthase F1 beta subunit [Escherichia coli]
gi|899257|emb|CAA25782.1| unnamed protein product [Escherichia coli]
gi|1790170|gb|AAC76755.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
coli str. K-12 substr. MG1655]
gi|13364149|dbj|BAB38097.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia coli
O157:H7 str. Sakai]
gi|24054294|gb|AAN45252.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Shigella
flexneri 2a str. 301]
gi|30043224|gb|AAP18945.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Shigella
flexneri 2a str. 2457T]
gi|73857719|gb|AAZ90426.1| membrane-bound ATP synthase, F1 sector, beta subunit [Shigella
sonnei Ss046]
gi|81247518|gb|ABB68226.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Shigella
boydii Sb227]
gi|85676306|dbj|BAE77556.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
coli str. K12 substr. W3110]
gi|91074831|gb|ABE09712.1| membrane-bound ATP synthase F1 sector beta-subunit [Escherichia
coli UTI89]
gi|110345665|gb|ABG71902.1| ATP synthase beta chain [Escherichia coli 536]
gi|110617104|gb|ABF05771.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Shigella
flexneri 5 str. 8401]
gi|115515129|gb|ABJ03204.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Escherichia
coli APEC O1]
gi|157078434|gb|ABV18142.1| ATP synthase F1, beta subunit [Escherichia coli E24377A]
gi|169757159|gb|ACA79858.1| ATP synthase F1, beta subunit [Escherichia coli ATCC 8739]
gi|169891068|gb|ACB04775.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
coli str. K-12 substr. DH10B]
gi|170124121|gb|EDS93052.1| ATP synthase F1, beta subunit [Escherichia albertii TW07627]
gi|170518907|gb|ACB17085.1| ATP synthase F1, beta subunit [Escherichia coli SMS-3-5]
gi|187429913|gb|ACD09187.1| ATP synthase F1, beta subunit [Shigella boydii CDC 3083-94]
gi|187771754|gb|EDU35598.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
EC4196]
gi|188016914|gb|EDU55036.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
EC4113]
gi|188488877|gb|EDU63980.1| ATP synthase F1, beta subunit [Escherichia coli 53638]
gi|189002239|gb|EDU71225.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
EC4076]
gi|189359262|gb|EDU77681.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
EC4401]
gi|189364495|gb|EDU82914.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
EC4486]
gi|189369653|gb|EDU88069.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
EC4501]
gi|189373310|gb|EDU91726.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC869]
gi|189378771|gb|EDU97187.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC508]
gi|190904130|gb|EDV63841.1| ATP synthase F1, beta subunit [Escherichia coli B7A]
gi|190909212|gb|EDV68798.1| ATP synthase F1, beta subunit [Escherichia coli F11]
gi|192930489|gb|EDV83096.1| ATP synthase F1, beta subunit [Escherichia coli E22]
gi|192957531|gb|EDV87977.1| ATP synthase F1, beta subunit [Escherichia coli E110019]
gi|194413819|gb|EDX30097.1| ATP synthase F1, beta subunit [Escherichia coli B171]
gi|194420499|gb|EDX36575.1| ATP synthase F1, beta subunit [Shigella dysenteriae 1012]
gi|194425326|gb|EDX41310.1| ATP synthase F1, beta subunit [Escherichia coli 101-1]
gi|208726812|gb|EDZ76413.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
EC4206]
gi|208733369|gb|EDZ82056.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
EC4045]
gi|208739021|gb|EDZ86703.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
EC4042]
gi|209162014|gb|ACI39447.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
EC4115]
gi|209753888|gb|ACI75251.1| membrane-bound ATP synthase gamma-subunit AtpG [Escherichia coli]
gi|209753890|gb|ACI75252.1| membrane-bound ATP synthase gamma-subunit AtpG [Escherichia coli]
gi|209753892|gb|ACI75253.1| membrane-bound ATP synthase gamma-subunit AtpG [Escherichia coli]
gi|209753894|gb|ACI75254.1| membrane-bound ATP synthase gamma-subunit AtpG [Escherichia coli]
gi|209753896|gb|ACI75255.1| membrane-bound ATP synthase gamma-subunit AtpG [Escherichia coli]
gi|209914472|dbj|BAG79546.1| ATP synthase beta subunit [Escherichia coli SE11]
gi|215267142|emb|CAS11590.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
coli O127:H6 str. E2348/69]
gi|217320873|gb|EEC29297.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
TW14588]
gi|218354190|emb|CAV00818.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
coli 55989]
gi|218358808|emb|CAQ91465.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
fergusonii ATCC 35469]
gi|218363072|emb|CAR00710.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
coli IAI1]
gi|218367576|emb|CAR05360.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
coli S88]
gi|218372568|emb|CAR20442.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
coli IAI39]
gi|218429584|emb|CAR10542.2| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
coli ED1a]
gi|218434475|emb|CAR15402.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
coli UMN026]
gi|222035445|emb|CAP78190.1| ATP synthase subunit beta [Escherichia coli LF82]
gi|226838916|gb|EEH70943.1| ATP synthase subunit beta [Escherichia sp. 1_1_43]
gi|226902797|gb|EEH89056.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia sp.
3_2_53FAA]
gi|227839232|gb|EEJ49698.1| H(+)-transporting two-sector ATPase [Escherichia coli 83972]
gi|238861068|gb|ACR63066.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
coli BW2952]
gi|242379270|emb|CAQ34077.1| ATP synthase, F1 complex, beta subunit, subunit of beta subunit
complex, ATP synthase, F1 complex and ATP synthase
[Escherichia coli BL21(DE3)]
gi|253326677|gb|ACT31279.1| ATP synthase F1, beta subunit [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975585|gb|ACT41256.1| F0F1 ATP synthase subunit beta [Escherichia coli B str. REL606]
gi|253979741|gb|ACT45411.1| F0F1 ATP synthase subunit beta [Escherichia coli BL21(DE3)]
gi|254595138|gb|ACT74499.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
coli O157:H7 str. TW14359]
gi|257756502|dbj|BAI28004.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD
[Escherichia coli O26:H11 str. 11368]
gi|257761630|dbj|BAI33127.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD
[Escherichia coli O103:H2 str. 12009]
gi|257766822|dbj|BAI38317.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD
[Escherichia coli O111:H- str. 11128]
gi|260451411|gb|ACX41833.1| ATP synthase F1, beta subunit [Escherichia coli DH1]
gi|281180790|dbj|BAI57120.1| ATP synthase beta subunit [Escherichia coli SE15]
gi|281603130|gb|ADA76114.1| ATP synthase subunit beta [Shigella flexneri 2002017]
gi|284923846|emb|CBG36945.1| ATP synthase beta subunit [Escherichia coli 042]
gi|290765029|gb|ADD58990.1| ATP synthase subunit beta [Escherichia coli O55:H7 str. CB9615]
gi|291321690|gb|EFE61126.1| ATP synthase F1 [Escherichia coli B088]
gi|291425660|gb|EFE98696.1| ATP synthase subunit beta [Escherichia coli FVEC1412]
gi|291431236|gb|EFF04229.1| ATP synthase F1 [Escherichia coli B185]
gi|291468315|gb|EFF10810.1| ATP synthase F1 [Escherichia coli B354]
gi|294493929|gb|ADE92685.1| ATP synthase F1, beta subunit [Escherichia coli IHE3034]
gi|298276947|gb|EFI18465.1| ATP synthase subunit beta [Escherichia coli FVEC1302]
gi|300300541|gb|EFJ56926.1| ATP synthase F1, beta subunit [Escherichia coli MS 185-1]
gi|300306857|gb|EFJ61377.1| ATP synthase F1, beta subunit [Escherichia coli MS 200-1]
gi|300314621|gb|EFJ64405.1| ATP synthase F1, beta subunit [Escherichia coli MS 175-1]
gi|300360047|gb|EFJ75917.1| ATP synthase F1, beta subunit [Escherichia coli MS 198-1]
gi|300398393|gb|EFJ81931.1| ATP synthase F1, beta subunit [Escherichia coli MS 69-1]
gi|300404981|gb|EFJ88519.1| ATP synthase F1, beta subunit [Escherichia coli MS 84-1]
gi|300408390|gb|EFJ91928.1| ATP synthase F1, beta subunit [Escherichia coli MS 45-1]
gi|300418336|gb|EFK01647.1| ATP synthase F1, beta subunit [Escherichia coli MS 182-1]
gi|300450049|gb|EFK13669.1| ATP synthase F1, beta subunit [Escherichia coli MS 116-1]
gi|300454348|gb|EFK17841.1| ATP synthase F1, beta subunit [Escherichia coli MS 21-1]
gi|300522959|gb|EFK44028.1| ATP synthase F1, beta subunit [Escherichia coli MS 119-7]
gi|300531905|gb|EFK52967.1| ATP synthase F1, beta subunit [Escherichia coli MS 107-1]
gi|300839127|gb|EFK66887.1| ATP synthase F1, beta subunit [Escherichia coli MS 124-1]
gi|300848138|gb|EFK75898.1| ATP synthase F1, beta subunit [Escherichia coli MS 78-1]
gi|301077247|gb|EFK92053.1| ATP synthase F1, beta subunit [Escherichia coli MS 146-1]
gi|305850312|gb|EFM50769.1| F0F1 ATP synthase subunit beta [Escherichia coli NC101]
gi|306906879|gb|EFN37388.1| ATP synthase F1, beta subunit [Escherichia coli W]
gi|307555871|gb|ADN48646.1| ATP synthase beta chain [Escherichia coli ABU 83972]
gi|307628806|gb|ADN73110.1| F0F1 ATP synthase subunit beta [Escherichia coli UM146]
gi|308120590|gb|EFO57852.1| ATP synthase F1, beta subunit [Escherichia coli MS 145-7]
gi|309704180|emb|CBJ03527.1| ATP synthase beta subunit [Escherichia coli ETEC H10407]
gi|312948298|gb|ADR29125.1| F0F1 ATP synthase subunit beta [Escherichia coli O83:H1 str. NRG
857C]
gi|313647652|gb|EFS12100.1| ATP synthase F1, beta subunit [Shigella flexneri 2a str. 2457T]
gi|315063042|gb|ADT77369.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
coli W]
gi|315138317|dbj|BAJ45476.1| ATP synthase subunit beta [Escherichia coli DH1]
gi|315254575|gb|EFU34543.1| ATP synthase F1, beta subunit [Escherichia coli MS 85-1]
gi|315285514|gb|EFU44956.1| ATP synthase F1, beta subunit [Escherichia coli MS 110-3]
gi|315292848|gb|EFU52200.1| ATP synthase F1, beta subunit [Escherichia coli MS 153-1]
gi|315296876|gb|EFU56165.1| ATP synthase F1, beta subunit [Escherichia coli MS 16-3]
gi|320174622|gb|EFW49758.1| ATP synthase beta chain [Shigella dysenteriae CDC 74-1112]
gi|320186285|gb|EFW61021.1| ATP synthase beta chain [Shigella flexneri CDC 796-83]
gi|320191164|gb|EFW65814.1| ATP synthase beta chain [Escherichia coli O157:H7 str. EC1212]
gi|320193723|gb|EFW68356.1| ATP synthase beta chain [Escherichia coli WV_060327]
gi|320201236|gb|EFW75817.1| ATP synthase beta chain [Escherichia coli EC4100B]
gi|320639460|gb|EFX09075.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str.
G5101]
gi|320644900|gb|EFX13936.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H- str.
493-89]
gi|320650166|gb|EFX18662.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H- str. H
2687]
gi|320655515|gb|EFX23450.1| F0F1 ATP synthase subunit beta [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661138|gb|EFX28574.1| F0F1 ATP synthase subunit beta [Escherichia coli O55:H7 str. USDA
5905]
gi|320666267|gb|EFX33273.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str.
LSU-61]
gi|323155413|gb|EFZ41596.1| ATP synthase F1, beta subunit [Escherichia coli EPECa14]
gi|323380896|gb|ADX53164.1| ATP synthase F1, beta subunit [Escherichia coli KO11FL]
gi|323934917|gb|EGB31295.1| ATP synthase F1 [Escherichia coli E1520]
gi|323939205|gb|EGB35418.1| ATP synthase F1 [Escherichia coli E482]
gi|323944208|gb|EGB40288.1| ATP synthase F1 [Escherichia coli H120]
gi|323949975|gb|EGB45859.1| ATP synthase F1 [Escherichia coli H252]
gi|323954973|gb|EGB50751.1| ATP synthase F1 [Escherichia coli H263]
gi|323959798|gb|EGB55448.1| ATP synthase F1 [Escherichia coli H489]
gi|323965800|gb|EGB61251.1| ATP synthase F1 [Escherichia coli M863]
gi|323971211|gb|EGB66457.1| ATP synthase F1 [Escherichia coli TA007]
gi|323975200|gb|EGB70304.1| ATP synthase F1 [Escherichia coli TW10509]
gi|324008032|gb|EGB77251.1| ATP synthase F1, beta subunit [Escherichia coli MS 57-2]
gi|324012762|gb|EGB81981.1| ATP synthase F1, beta subunit [Escherichia coli MS 60-1]
gi|324018470|gb|EGB87689.1| ATP synthase F1, beta subunit [Escherichia coli MS 117-3]
gi|324111631|gb|EGC05612.1| ATP synthase F1 [Escherichia fergusonii B253]
gi|324115912|gb|EGC09838.1| ATP synthase F1 [Escherichia coli E1167]
gi|325499538|gb|EGC97397.1| F0F1 ATP synthase subunit beta [Escherichia fergusonii ECD227]
gi|326340520|gb|EGD64319.1| ATP synthase beta chain [Escherichia coli O157:H7 str. 1044]
gi|326341586|gb|EGD65375.1| ATP synthase beta chain [Escherichia coli O157:H7 str. 1125]
gi|327250884|gb|EGE62586.1| ATP synthase F1, beta subunit [Escherichia coli STEC_7v]
gi|330908045|gb|EGH36564.1| ATP synthase beta chain [Escherichia coli AA86]
gi|331036753|gb|EGI08979.1| ATP synthase F1, beta subunit [Escherichia coli H736]
gi|331042056|gb|EGI14200.1| ATP synthase F1, beta subunit [Escherichia coli M605]
gi|331047409|gb|EGI19487.1| ATP synthase F1, beta subunit [Escherichia coli M718]
gi|331053291|gb|EGI25324.1| ATP synthase F1, beta subunit [Escherichia coli TA206]
gi|331057896|gb|EGI29882.1| ATP synthase F1, beta subunit [Escherichia coli TA143]
gi|331062644|gb|EGI34564.1| ATP synthase F1, beta subunit [Escherichia coli TA271]
gi|331067664|gb|EGI39066.1| ATP synthase F1, beta subunit [Escherichia coli TA280]
gi|331073008|gb|EGI44333.1| ATP synthase F1, beta subunit [Escherichia coli H591]
gi|331077830|gb|EGI49042.1| ATP synthase F1, beta subunit [Escherichia coli H299]
gi|332084602|gb|EGI89796.1| ATP synthase F1, beta subunit [Shigella boydii 5216-82]
gi|332104825|gb|EGJ08171.1| F1 sector of membrane-bound ATP synthase beta subunit [Shigella sp.
D9]
gi|332345722|gb|AEE59056.1| ATP synthase F1, beta subunit AtpD [Escherichia coli UMNK88]
gi|332750741|gb|EGJ81149.1| ATP synthase F1, beta subunit [Shigella flexneri 4343-70]
gi|332750905|gb|EGJ81311.1| ATP synthase F1, beta subunit [Shigella flexneri K-671]
gi|332998044|gb|EGK17649.1| ATP synthase F1, beta subunit [Shigella flexneri K-272]
gi|333971917|gb|AEG38722.1| ATP synthase beta chain [Escherichia coli NA114]
gi|338768088|gb|EGP22893.1| ATP synthase subunit beta [Escherichia coli PCN033]
gi|340731743|gb|EGR60882.1| F0F1 ATP synthase subunit beta [Escherichia coli O104:H4 str.
01-09591]
gi|340737978|gb|EGR72230.1| F0F1 ATP synthase subunit beta [Escherichia coli O104:H4 str.
LB226692]
gi|341919654|gb|EGT69265.1| atpD [Escherichia coli O104:H4 str. C227-11]
gi|342361055|gb|EGU25206.1| F0F1 ATP synthase subunit beta [Escherichia coli XH140A]
gi|344193943|gb|EGV48020.1| F0F1 ATP synthase subunit beta [Escherichia coli XH001]
gi|345334424|gb|EGW66868.1| ATP synthase F1, beta subunit [Escherichia coli STEC_B2F1]
gi|345347168|gb|EGW79482.1| ATP synthase F1, beta subunit [Escherichia coli STEC_94C]
gi|345348673|gb|EGW80966.1| ATP synthase F1, beta subunit [Escherichia coli 3030-1]
gi|345353671|gb|EGW85902.1| ATP synthase F1, beta subunit [Escherichia coli STEC_DG131-3]
gi|345369630|gb|EGX01612.1| ATP synthase F1, beta subunit [Escherichia coli G58-1]
gi|345370464|gb|EGX02442.1| ATP synthase F1, beta subunit [Escherichia coli STEC_MHI813]
gi|345384957|gb|EGX14809.1| ATP synthase F1, beta subunit [Escherichia coli STEC_S1191]
gi|345389715|gb|EGX19516.1| ATP synthase F1, beta subunit [Escherichia coli TX1999]
gi|349740370|gb|AEQ15076.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
coli O7:K1 str. CE10]
gi|354857523|gb|EHF17977.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. C236-11]
gi|354861075|gb|EHF21515.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. C227-11]
gi|354863542|gb|EHF23975.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 04-8351]
gi|354871578|gb|EHF31976.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 09-7901]
gi|354876332|gb|EHF36693.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-3677]
gi|354885459|gb|EHF45757.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-4404]
gi|354889277|gb|EHF49529.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-4522]
gi|354892620|gb|EHF52828.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-4623]
gi|354904697|gb|EHF64787.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-4632
C1]
gi|354908485|gb|EHF68540.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-4632
C2]
gi|354910386|gb|EHF70413.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-4632
C3]
gi|354912475|gb|EHF72475.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-4632
C4]
gi|354920646|gb|EHF80579.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-4632
C5]
gi|355422576|gb|AER86773.1| F0F1 ATP synthase subunit beta [Escherichia coli str. 'clone D i2']
gi|355427496|gb|AER91692.1| F0F1 ATP synthase subunit beta [Escherichia coli str. 'clone D
i14']
gi|359333877|dbj|BAL40324.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
coli str. K-12 substr. MDS42]
gi|371592570|gb|EHN81467.1| ATP synthase subunit beta [Escherichia coli H494]
gi|371593842|gb|EHN82717.1| ATP synthase subunit beta [Escherichia coli TA124]
gi|371602870|gb|EHN91556.1| ATP synthase subunit beta [Escherichia coli B093]
gi|371604097|gb|EHN92731.1| ATP synthase subunit beta [Escherichia coli H397]
gi|371610201|gb|EHN98732.1| ATP synthase subunit beta [Escherichia coli E101]
gi|373243861|gb|EHP63357.1| ATP synthase subunit beta [Escherichia coli 4_1_47FAA]
gi|374361185|gb|AEZ42892.1| F0F1 ATP synthase subunit beta [Escherichia coli O55:H7 str.
RM12579]
gi|375320007|gb|EHS66033.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H43 str. T22]
gi|377839168|gb|EHU04267.1| ATP synthase F1, beta subunit [Escherichia coli DEC1C]
gi|377841956|gb|EHU07012.1| ATP synthase F1, beta subunit [Escherichia coli DEC1B]
gi|377853049|gb|EHU17956.1| ATP synthase F1, beta subunit [Escherichia coli DEC1D]
gi|377858375|gb|EHU23215.1| ATP synthase F1, beta subunit [Escherichia coli DEC2A]
gi|377870476|gb|EHU35160.1| ATP synthase F1, beta subunit [Escherichia coli DEC2B]
gi|377872309|gb|EHU36956.1| ATP synthase F1, beta subunit [Escherichia coli DEC2C]
gi|377874707|gb|EHU39333.1| ATP synthase F1, beta subunit [Escherichia coli DEC2D]
gi|377886169|gb|EHU50654.1| ATP synthase F1, beta subunit [Escherichia coli DEC2E]
gi|377889283|gb|EHU53749.1| ATP synthase F1, beta subunit [Escherichia coli DEC3A]
gi|377890008|gb|EHU54467.1| ATP synthase F1, beta subunit [Escherichia coli DEC3B]
gi|377902798|gb|EHU67101.1| ATP synthase F1, beta subunit [Escherichia coli DEC3C]
gi|377905497|gb|EHU69765.1| ATP synthase F1, beta subunit [Escherichia coli DEC3D]
gi|377906902|gb|EHU71142.1| ATP synthase F1, beta subunit [Escherichia coli DEC3E]
gi|377917114|gb|EHU81180.1| ATP synthase F1, beta subunit [Escherichia coli DEC3F]
gi|377923219|gb|EHU87187.1| ATP synthase F1, beta subunit [Escherichia coli DEC4A]
gi|377927989|gb|EHU91904.1| ATP synthase F1, beta subunit [Escherichia coli DEC4B]
gi|377937443|gb|EHV01220.1| ATP synthase F1, beta subunit [Escherichia coli DEC4D]
gi|377938122|gb|EHV01891.1| ATP synthase F1, beta subunit [Escherichia coli DEC4C]
gi|377944338|gb|EHV08043.1| ATP synthase F1, beta subunit [Escherichia coli DEC4E]
gi|377954868|gb|EHV18427.1| ATP synthase F1, beta subunit [Escherichia coli DEC4F]
gi|377957625|gb|EHV21156.1| ATP synthase F1, beta subunit [Escherichia coli DEC5A]
gi|377961866|gb|EHV25331.1| ATP synthase F1, beta subunit [Escherichia coli DEC5B]
gi|377969814|gb|EHV33189.1| ATP synthase F1, beta subunit [Escherichia coli DEC5C]
gi|377970665|gb|EHV34024.1| ATP synthase F1, beta subunit [Escherichia coli DEC5D]
gi|377981228|gb|EHV44488.1| ATP synthase F1, beta subunit [Escherichia coli DEC5E]
gi|377989280|gb|EHV52448.1| ATP synthase F1, beta subunit [Escherichia coli DEC6A]
gi|377993325|gb|EHV56463.1| ATP synthase F1, beta subunit [Escherichia coli DEC6C]
gi|378003977|gb|EHV67013.1| ATP synthase F1, beta subunit [Escherichia coli DEC6D]
gi|378011411|gb|EHV74355.1| ATP synthase F1, beta subunit [Escherichia coli DEC7A]
gi|378021158|gb|EHV83880.1| ATP synthase F1, beta subunit [Escherichia coli DEC7C]
gi|378024864|gb|EHV87517.1| ATP synthase F1, beta subunit [Escherichia coli DEC7D]
gi|378029295|gb|EHV91910.1| ATP synthase F1, beta subunit [Escherichia coli DEC7B]
gi|378042990|gb|EHW05430.1| ATP synthase F1, beta subunit [Escherichia coli DEC8A]
gi|378043607|gb|EHW06041.1| ATP synthase F1, beta subunit [Escherichia coli DEC8B]
gi|378049052|gb|EHW11403.1| ATP synthase F1, beta subunit [Escherichia coli DEC8C]
gi|378060947|gb|EHW23135.1| ATP synthase F1, beta subunit [Escherichia coli DEC8D]
gi|378061047|gb|EHW23234.1| ATP synthase F1, beta subunit [Escherichia coli DEC8E]
gi|378068231|gb|EHW30334.1| ATP synthase F1, beta subunit [Escherichia coli DEC9A]
gi|378073684|gb|EHW35730.1| ATP synthase F1, beta subunit [Escherichia coli DEC9B]
gi|378079289|gb|EHW41266.1| ATP synthase F1, beta subunit [Escherichia coli DEC9C]
gi|378086975|gb|EHW48845.1| ATP synthase F1, beta subunit [Escherichia coli DEC9D]
gi|378089259|gb|EHW51102.1| ATP synthase F1, beta subunit [Escherichia coli DEC9E]
gi|378096246|gb|EHW58017.1| ATP synthase F1, beta subunit [Escherichia coli DEC10A]
gi|378101527|gb|EHW63212.1| ATP synthase F1, beta subunit [Escherichia coli DEC10B]
gi|378106328|gb|EHW67957.1| ATP synthase F1, beta subunit [Escherichia coli DEC10C]
gi|378112592|gb|EHW74166.1| ATP synthase F1, beta subunit [Escherichia coli DEC10D]
gi|378124705|gb|EHW86109.1| ATP synthase F1, beta subunit [Escherichia coli DEC10F]
gi|378125399|gb|EHW86800.1| ATP synthase F1, beta subunit [Escherichia coli DEC11A]
gi|378138563|gb|EHW99817.1| ATP synthase F1, beta subunit [Escherichia coli DEC11B]
gi|378144543|gb|EHX05715.1| ATP synthase F1, beta subunit [Escherichia coli DEC11D]
gi|378146670|gb|EHX07821.1| ATP synthase F1, beta subunit [Escherichia coli DEC11C]
gi|378155714|gb|EHX16773.1| ATP synthase F1, beta subunit [Escherichia coli DEC11E]
gi|378161350|gb|EHX22332.1| ATP synthase F1, beta subunit [Escherichia coli DEC12B]
gi|378165373|gb|EHX26309.1| ATP synthase F1, beta subunit [Escherichia coli DEC12A]
gi|378165726|gb|EHX26657.1| ATP synthase F1, beta subunit [Escherichia coli DEC12C]
gi|378179192|gb|EHX39927.1| ATP synthase F1, beta subunit [Escherichia coli DEC12D]
gi|378182664|gb|EHX43314.1| ATP synthase F1, beta subunit [Escherichia coli DEC13A]
gi|378183238|gb|EHX43884.1| ATP synthase F1, beta subunit [Escherichia coli DEC12E]
gi|378195882|gb|EHX56373.1| ATP synthase F1, beta subunit [Escherichia coli DEC13B]
gi|378196163|gb|EHX56653.1| ATP synthase F1, beta subunit [Escherichia coli DEC13C]
gi|378210021|gb|EHX70388.1| ATP synthase F1, beta subunit [Escherichia coli DEC13E]
gi|378211995|gb|EHX72322.1| ATP synthase F1, beta subunit [Escherichia coli DEC14A]
gi|378214964|gb|EHX75265.1| ATP synthase F1, beta subunit [Escherichia coli DEC14B]
gi|378228144|gb|EHX88310.1| ATP synthase F1, beta subunit [Escherichia coli DEC14D]
gi|378233588|gb|EHX93674.1| ATP synthase F1, beta subunit [Escherichia coli DEC15A]
gi|378243203|gb|EHY03150.1| ATP synthase F1, beta subunit [Escherichia coli DEC15C]
gi|378251519|gb|EHY11417.1| ATP synthase F1, beta subunit [Escherichia coli DEC15D]
gi|378256141|gb|EHY15994.1| ATP synthase F1, beta subunit [Escherichia coli DEC15E]
gi|380346247|gb|EIA34543.1| F0F1 ATP synthase subunit beta [Escherichia coli SCI-07]
gi|383105178|gb|AFG42687.1| ATP synthase subunit beta [Escherichia coli P12b]
gi|383390774|gb|AFH15732.1| F0F1 ATP synthase subunit beta [Escherichia coli KO11FL]
gi|383407345|gb|AFH13588.1| F0F1 ATP synthase subunit beta [Escherichia coli W]
gi|383468986|gb|EID64007.1| F0F1 ATP synthase subunit beta [Shigella flexneri 5a str. M90T]
gi|383476686|gb|EID68621.1| F0F1 ATP synthase subunit beta [Escherichia coli W26]
gi|384381248|gb|EIE39107.1| F0F1 ATP synthase subunit beta [Escherichia coli J53]
gi|385156447|gb|EIF18444.1| F0F1 ATP synthase subunit beta [Escherichia coli O32:H37 str. P4]
gi|385537702|gb|EIF84572.1| ATP synthase subunit beta [Escherichia coli M919]
gi|385708404|gb|EIG45416.1| ATP synthase subunit beta [Escherichia coli H730]
gi|385708963|gb|EIG45965.1| ATP synthase subunit beta [Escherichia coli B799]
gi|386120215|gb|EIG68845.1| ATP synthase subunit beta [Escherichia sp. 4_1_40B]
gi|386139078|gb|EIG80233.1| ATP synthase F1, beta subunit [Escherichia coli 1.2741]
gi|386151004|gb|EIH02293.1| ATP synthase F1, beta subunit [Escherichia coli 5.0588]
gi|386155207|gb|EIH11562.1| ATP synthase F1, beta subunit [Escherichia coli 97.0259]
gi|386161741|gb|EIH23544.1| ATP synthase F1, beta subunit [Escherichia coli 1.2264]
gi|386166076|gb|EIH32596.1| ATP synthase F1, beta subunit [Escherichia coli 96.0497]
gi|386170329|gb|EIH42389.1| ATP synthase F1, beta subunit [Escherichia coli 99.0741]
gi|386179318|gb|EIH56797.1| ATP synthase F1, beta subunit [Escherichia coli 3.2608]
gi|386182769|gb|EIH65525.1| ATP synthase F1, beta subunit [Escherichia coli 93.0624]
gi|386186620|gb|EIH75443.1| ATP synthase F1, beta subunit [Escherichia coli 4.0522]
gi|386195989|gb|EIH90217.1| ATP synthase F1, beta subunit [Escherichia coli JB1-95]
gi|386202236|gb|EII01227.1| ATP synthase F1, beta subunit [Escherichia coli 96.154]
gi|386210111|gb|EII20592.1| ATP synthase F1, beta subunit [Escherichia coli 9.0111]
gi|386220091|gb|EII36555.1| ATP synthase F1, beta subunit [Escherichia coli 4.0967]
gi|386228928|gb|EII56284.1| ATP synthase F1, beta subunit [Escherichia coli 3.3884]
gi|386234542|gb|EII66520.1| ATP synthase F1, beta subunit [Escherichia coli 2.4168]
gi|386238020|gb|EII74960.1| ATP synthase F1, beta subunit [Escherichia coli 3.2303]
gi|386246824|gb|EII88554.1| ATP synthase F1, beta subunit [Escherichia coli 3003]
gi|386250430|gb|EII96597.1| ATP synthase F1, beta subunit [Escherichia coli TW07793]
gi|386252156|gb|EIJ01848.1| ATP synthase F1, beta subunit [Escherichia coli B41]
gi|386259937|gb|EIJ15411.1| ATP synthase F1, beta subunit [Escherichia coli 900105 (10e)]
gi|386798428|gb|AFJ31462.1| F0F1 ATP synthase subunit beta [Escherichia coli Xuzhou21]
gi|388334828|gb|EIL01410.1| F0F1 ATP synthase subunit beta [Escherichia coli O103:H2 str.
CVM9450]
gi|388336760|gb|EIL03288.1| F0F1 ATP synthase subunit beta [Escherichia coli O103:H25 str.
CVM9340]
gi|388348923|gb|EIL14486.1| F0F1 ATP synthase subunit beta [Escherichia coli O111:H8 str.
CVM9570]
gi|388350827|gb|EIL16143.1| F0F1 ATP synthase subunit beta [Escherichia coli O111:H11 str.
CVM9534]
gi|388355245|gb|EIL20102.1| F0F1 ATP synthase subunit beta [Escherichia coli O111:H8 str.
CVM9574]
gi|388364091|gb|EIL27967.1| F0F1 ATP synthase subunit beta [Escherichia coli O111:H11 str.
CVM9545]
gi|388370519|gb|EIL34045.1| hypothetical protein ECO10026_26403 [Escherichia coli O26:H11 str.
CVM10026]
gi|388380097|gb|EIL42722.1| F0F1 ATP synthase subunit beta [Escherichia coli O26:H11 str.
CVM9942]
gi|388382848|gb|EIL44667.1| F0F1 ATP synthase subunit beta [Escherichia coli 541-15]
gi|388393319|gb|EIL54703.1| F0F1 ATP synthase subunit beta [Escherichia coli KD2]
gi|388393655|gb|EIL55011.1| F0F1 ATP synthase subunit beta [Escherichia coli KD1]
gi|388403789|gb|EIL64292.1| F0F1 ATP synthase subunit beta [Escherichia coli 541-1]
gi|388409467|gb|EIL69758.1| F0F1 ATP synthase subunit beta [Escherichia coli 576-1]
gi|388411790|gb|EIL71928.1| F0F1 ATP synthase subunit beta [Escherichia coli 75]
gi|388418866|gb|EIL78639.1| F0F1 ATP synthase subunit beta [Escherichia coli CUMT8]
gi|388419924|gb|EIL79629.1| F0F1 ATP synthase subunit beta [Escherichia coli HM605]
gi|390637798|gb|EIN17336.1| ATP synthase F1, beta subunit [Escherichia coli FDA505]
gi|390638725|gb|EIN18225.1| ATP synthase F1, beta subunit [Escherichia coli FDA517]
gi|390656728|gb|EIN34581.1| ATP synthase F1, beta subunit [Escherichia coli 93-001]
gi|390659589|gb|EIN37345.1| ATP synthase F1, beta subunit [Escherichia coli FRIK1990]
gi|390674144|gb|EIN50348.1| ATP synthase F1, beta subunit [Escherichia coli PA3]
gi|390677393|gb|EIN53440.1| ATP synthase F1, beta subunit [Escherichia coli PA5]
gi|390680849|gb|EIN56665.1| ATP synthase F1, beta subunit [Escherichia coli PA9]
gi|390692045|gb|EIN66757.1| ATP synthase F1, beta subunit [Escherichia coli PA10]
gi|390696287|gb|EIN70769.1| ATP synthase F1, beta subunit [Escherichia coli PA14]
gi|390697552|gb|EIN71964.1| ATP synthase F1, beta subunit [Escherichia coli PA15]
gi|390711380|gb|EIN84353.1| ATP synthase F1, beta subunit [Escherichia coli PA22]
gi|390717821|gb|EIN90596.1| ATP synthase F1, beta subunit [Escherichia coli PA24]
gi|390718308|gb|EIN91064.1| ATP synthase F1, beta subunit [Escherichia coli PA25]
gi|390724437|gb|EIN96993.1| ATP synthase F1, beta subunit [Escherichia coli PA28]
gi|390756069|gb|EIO25590.1| ATP synthase F1, beta subunit [Escherichia coli PA40]
gi|390762127|gb|EIO31392.1| ATP synthase F1, beta subunit [Escherichia coli PA41]
gi|390765115|gb|EIO34297.1| ATP synthase F1, beta subunit [Escherichia coli PA42]
gi|390779693|gb|EIO47407.1| ATP synthase F1, beta subunit [Escherichia coli TW06591]
gi|390786258|gb|EIO53781.1| ATP synthase F1, beta subunit [Escherichia coli TW07945]
gi|390787318|gb|EIO54810.1| ATP synthase F1, beta subunit [Escherichia coli TW10246]
gi|390793221|gb|EIO60565.1| ATP synthase F1, beta subunit [Escherichia coli TW11039]
gi|390813820|gb|EIO80422.1| ATP synthase F1, beta subunit [Escherichia coli TW10119]
gi|390822105|gb|EIO88245.1| ATP synthase F1, beta subunit [Escherichia coli TW09195]
gi|390822571|gb|EIO88682.1| ATP synthase F1, beta subunit [Escherichia coli EC4203]
gi|390827665|gb|EIO93415.1| ATP synthase F1, beta subunit [Escherichia coli EC4196]
gi|390840837|gb|EIP04833.1| ATP synthase F1, beta subunit [Escherichia coli TW14313]
gi|390842898|gb|EIP06729.1| ATP synthase F1, beta subunit [Escherichia coli TW14301]
gi|390858317|gb|EIP20715.1| ATP synthase F1, beta subunit [Escherichia coli EC4422]
gi|390862832|gb|EIP25003.1| ATP synthase F1, beta subunit [Escherichia coli EC4013]
gi|390866743|gb|EIP28678.1| ATP synthase F1, beta subunit [Escherichia coli EC4402]
gi|390890305|gb|EIP49982.1| ATP synthase F1, beta subunit [Escherichia coli EC4437]
gi|390891783|gb|EIP51403.1| ATP synthase F1, beta subunit [Escherichia coli EC4448]
gi|390897970|gb|EIP57262.1| ATP synthase F1, beta subunit [Escherichia coli EC1738]
gi|390906135|gb|EIP65049.1| ATP synthase F1, beta subunit [Escherichia coli EC1734]
gi|390915863|gb|EIP74361.1| ATP synthase F1, beta subunit [Escherichia coli EC1845]
gi|390915944|gb|EIP74438.1| ATP synthase F1, beta subunit [Escherichia coli EC1863]
gi|391265404|gb|EIQ24376.1| ATP synthase F1, beta subunit [Shigella boydii 965-58]
gi|391301496|gb|EIQ59382.1| ATP synthase F1, beta subunit [Escherichia coli EPECa12]
gi|394382972|gb|EJE60582.1| F0F1 ATP synthase subunit beta [Escherichia coli O111:H8 str.
CVM9634]
gi|394383623|gb|EJE61217.1| F0F1 ATP synthase subunit beta [Escherichia coli O111:H8 str.
CVM9602]
gi|394395524|gb|EJE71952.1| F0F1 ATP synthase subunit beta [Escherichia coli O26:H11 str.
CVM10224]
gi|394414422|gb|EJE88367.1| F0F1 ATP synthase subunit beta [Escherichia coli O26:H11 str.
CVM10021]
gi|394415126|gb|EJE89016.1| F0F1 ATP synthase subunit beta [Escherichia coli O26:H11 str.
CVM10030]
gi|394415587|gb|EJE89441.1| F0F1 ATP synthase subunit beta [Escherichia coli O111:H11 str.
CVM9553]
gi|394418350|gb|EJE92029.1| F0F1 ATP synthase subunit beta [Escherichia coli O111:H11 str.
CVM9455]
gi|394419934|gb|EJE93503.1| F0F1 ATP synthase subunit beta [Escherichia coli O26:H11 str.
CVM9952]
gi|397783156|gb|EJK94017.1| ATP synthase F1, beta subunit [Escherichia coli STEC_O31]
gi|397895192|gb|EJL11625.1| ATP synthase F1, beta subunit [Shigella sonnei str. Moseley]
gi|406780236|gb|AFS59660.1| F0F1 ATP synthase subunit beta [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407056825|gb|AFS76876.1| F0F1 ATP synthase subunit beta [Escherichia coli O104:H4 str.
2011C-3493]
gi|407062782|gb|AFS83829.1| F0F1 ATP synthase subunit beta [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408061611|gb|EKG96124.1| ATP synthase F1, beta subunit [Escherichia coli PA7]
gi|408062093|gb|EKG96601.1| ATP synthase F1, beta subunit [Escherichia coli FRIK920]
gi|408065491|gb|EKG99962.1| ATP synthase F1, beta subunit [Escherichia coli PA34]
gi|408075973|gb|EKH10203.1| ATP synthase F1, beta subunit [Escherichia coli FDA506]
gi|408080448|gb|EKH14523.1| ATP synthase F1, beta subunit [Escherichia coli FDA507]
gi|408088585|gb|EKH21946.1| ATP synthase F1, beta subunit [Escherichia coli FDA504]
gi|408094760|gb|EKH27770.1| ATP synthase F1, beta subunit [Escherichia coli FRIK1999]
gi|408100990|gb|EKH33464.1| ATP synthase F1, beta subunit [Escherichia coli FRIK1997]
gi|408112676|gb|EKH44311.1| ATP synthase F1, beta subunit [Escherichia coli NE037]
gi|408125124|gb|EKH55753.1| ATP synthase F1, beta subunit [Escherichia coli PA4]
gi|408134953|gb|EKH64765.1| ATP synthase F1, beta subunit [Escherichia coli PA23]
gi|408137116|gb|EKH66831.1| ATP synthase F1, beta subunit [Escherichia coli PA49]
gi|408143944|gb|EKH73204.1| ATP synthase F1, beta subunit [Escherichia coli PA45]
gi|408152374|gb|EKH80814.1| ATP synthase F1, beta subunit [Escherichia coli TT12B]
gi|408157382|gb|EKH85536.1| ATP synthase F1, beta subunit [Escherichia coli MA6]
gi|408161476|gb|EKH89432.1| ATP synthase F1, beta subunit [Escherichia coli 5905]
gi|408177348|gb|EKI04155.1| ATP synthase F1, beta subunit [Escherichia coli EC96038]
gi|408180352|gb|EKI06971.1| ATP synthase F1, beta subunit [Escherichia coli 5412]
gi|408189777|gb|EKI15476.1| ATP synthase F1, beta subunit [Escherichia coli TW15901]
gi|408197529|gb|EKI22788.1| ATP synthase F1, beta subunit [Escherichia coli ARS4.2123]
gi|408198017|gb|EKI23263.1| ATP synthase F1, beta subunit [Escherichia coli TW00353]
gi|408210637|gb|EKI35199.1| ATP synthase F1, beta subunit [Escherichia coli 07798]
gi|408211713|gb|EKI36256.1| ATP synthase F1, beta subunit [Escherichia coli PA38]
gi|408223592|gb|EKI47357.1| ATP synthase F1, beta subunit [Escherichia coli EC1735]
gi|408225054|gb|EKI48747.1| ATP synthase F1, beta subunit [Escherichia coli N1]
gi|408235099|gb|EKI58082.1| ATP synthase F1, beta subunit [Escherichia coli EC1736]
gi|408237883|gb|EKI60721.1| ATP synthase F1, beta subunit [Escherichia coli EC1737]
gi|408243032|gb|EKI65577.1| ATP synthase F1, beta subunit [Escherichia coli EC1846]
gi|408252014|gb|EKI73720.1| ATP synthase F1, beta subunit [Escherichia coli EC1847]
gi|408256373|gb|EKI77756.1| ATP synthase F1, beta subunit [Escherichia coli EC1848]
gi|408262874|gb|EKI83780.1| ATP synthase F1, beta subunit [Escherichia coli EC1849]
gi|408271119|gb|EKI91264.1| ATP synthase F1, beta subunit [Escherichia coli EC1850]
gi|408274399|gb|EKI94413.1| ATP synthase F1, beta subunit [Escherichia coli EC1856]
gi|408282208|gb|EKJ01541.1| ATP synthase F1, beta subunit [Escherichia coli EC1862]
gi|408288737|gb|EKJ07552.1| ATP synthase F1, beta subunit [Escherichia coli EC1864]
gi|408293255|gb|EKJ11709.1| ATP synthase F1, beta subunit [Escherichia coli EC1865]
gi|408316229|gb|EKJ32522.1| ATP synthase F1, beta subunit [Escherichia coli EC1869]
gi|408321492|gb|EKJ37523.1| ATP synthase F1, beta subunit [Escherichia coli EC1870]
gi|408323290|gb|EKJ39253.1| ATP synthase F1, beta subunit [Escherichia coli NE098]
gi|408334110|gb|EKJ49009.1| ATP synthase F1, beta subunit [Escherichia coli FRIK523]
gi|408340877|gb|EKJ55357.1| ATP synthase F1, beta subunit [Escherichia coli 0.1288]
gi|408457784|gb|EKJ81576.1| F0F1 ATP synthase subunit beta [Escherichia coli AD30]
gi|408545264|gb|EKK22703.1| ATP synthase F1, beta subunit [Escherichia coli 5.2239]
gi|408546433|gb|EKK23848.1| ATP synthase F1, beta subunit [Escherichia coli 6.0172]
gi|408563731|gb|EKK39862.1| ATP synthase F1, beta subunit [Escherichia coli 8.0566]
gi|408563825|gb|EKK39951.1| ATP synthase F1, beta subunit [Escherichia coli 8.0586]
gi|408575887|gb|EKK51530.1| ATP synthase F1, beta subunit [Escherichia coli 10.0833]
gi|408578662|gb|EKK54172.1| ATP synthase F1, beta subunit [Escherichia coli 8.2524]
gi|408593526|gb|EKK67836.1| ATP synthase F1, beta subunit [Escherichia coli 88.0221]
gi|408599153|gb|EKK73077.1| ATP synthase F1, beta subunit [Escherichia coli 8.0416]
gi|408609469|gb|EKK82850.1| ATP synthase F1, beta subunit [Escherichia coli 10.0821]
gi|412965119|emb|CCK49049.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Escherichia
coli chi7122]
gi|412971705|emb|CCJ46368.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Escherichia
coli]
gi|421936434|gb|EKT94097.1| F0F1 ATP synthase subunit beta [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421941917|gb|EKT99289.1| F0F1 ATP synthase subunit beta [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421948046|gb|EKU05097.1| F0F1 ATP synthase subunit beta [Escherichia coli O111:H11 str.
CFSAN001630]
gi|427201560|gb|EKV71941.1| ATP synthase F1, beta subunit [Escherichia coli 88.1042]
gi|427217856|gb|EKV86906.1| ATP synthase F1, beta subunit [Escherichia coli 90.0091]
gi|427221390|gb|EKV90240.1| ATP synthase F1, beta subunit [Escherichia coli 90.2281]
gi|427238545|gb|EKW06060.1| ATP synthase F1, beta subunit [Escherichia coli 93.0055]
gi|427242998|gb|EKW10393.1| ATP synthase F1, beta subunit [Escherichia coli 94.0618]
gi|427255890|gb|EKW22126.1| ATP synthase F1, beta subunit [Escherichia coli 95.0183]
gi|427258239|gb|EKW24333.1| ATP synthase F1, beta subunit [Escherichia coli 95.1288]
gi|427273311|gb|EKW38000.1| ATP synthase F1, beta subunit [Escherichia coli 96.0428]
gi|427280727|gb|EKW45079.1| ATP synthase F1, beta subunit [Escherichia coli 96.0939]
gi|427289145|gb|EKW52730.1| ATP synthase F1, beta subunit [Escherichia coli 96.0932]
gi|427296015|gb|EKW59087.1| ATP synthase F1, beta subunit [Escherichia coli 96.0107]
gi|427298145|gb|EKW61167.1| ATP synthase F1, beta subunit [Escherichia coli 97.0003]
gi|427308027|gb|EKW70444.1| ATP synthase F1, beta subunit [Escherichia coli 97.1742]
gi|427325310|gb|EKW86756.1| ATP synthase F1, beta subunit [Escherichia coli 99.0678]
gi|427326621|gb|EKW88030.1| ATP synthase F1, beta subunit [Escherichia coli 99.0713]
gi|429250838|gb|EKY35480.1| ATP synthase F1, beta subunit [Escherichia coli 96.0109]
gi|429251326|gb|EKY35933.1| ATP synthase F1, beta subunit [Escherichia coli 97.0010]
gi|429355906|gb|EKY92590.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-02030]
gi|429356260|gb|EKY92940.1| ATP synthase subunit beta [Escherichia coli O104:H4 str.
11-02033-1]
gi|429357952|gb|EKY94623.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-02092]
gi|429371320|gb|EKZ07878.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-02093]
gi|429373323|gb|EKZ09870.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-02281]
gi|429376075|gb|EKZ12606.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-02318]
gi|429387650|gb|EKZ24089.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-02913]
gi|429390413|gb|EKZ26827.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-03439]
gi|429390864|gb|EKZ27272.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-03943]
gi|429401270|gb|EKZ37578.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. 11-04080]
gi|429402501|gb|EKZ38792.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec11-9990]
gi|429404833|gb|EKZ41103.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec11-9450]
gi|429413729|gb|EKZ49914.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec11-4984]
gi|429415768|gb|EKZ51927.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec11-4986]
gi|429424094|gb|EKZ60200.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec11-4987]
gi|429427625|gb|EKZ63706.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec11-4988]
gi|429432579|gb|EKZ68618.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec11-5603]
gi|429439876|gb|EKZ75857.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec11-5604]
gi|429444043|gb|EKZ79990.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec12-0465]
gi|429448531|gb|EKZ84444.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec11-6006]
gi|429454280|gb|EKZ90143.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec12-0466]
gi|429458659|gb|EKZ94482.1| ATP synthase subunit beta [Escherichia coli O104:H4 str. Ec11-9941]
gi|430872196|gb|ELB95811.1| ATP synthase subunit beta [Escherichia coli KTE2]
gi|430873331|gb|ELB96906.1| ATP synthase subunit beta [Escherichia coli KTE4]
gi|430883287|gb|ELC06291.1| ATP synthase subunit beta [Escherichia coli KTE5]
gi|430891033|gb|ELC13581.1| ATP synthase subunit beta [Escherichia coli KTE10]
gi|430893734|gb|ELC16058.1| ATP synthase subunit beta [Escherichia coli KTE11]
gi|430895925|gb|ELC18178.1| ATP synthase subunit beta [Escherichia coli KTE12]
gi|430903539|gb|ELC25276.1| ATP synthase subunit beta [Escherichia coli KTE16]
gi|430904025|gb|ELC25761.1| ATP synthase subunit beta [Escherichia coli KTE15]
gi|430912852|gb|ELC34024.1| ATP synthase subunit beta [Escherichia coli KTE25]
gi|430914125|gb|ELC35233.1| ATP synthase subunit beta [Escherichia coli KTE21]
gi|430922650|gb|ELC43398.1| ATP synthase subunit beta [Escherichia coli KTE26]
gi|430926187|gb|ELC46775.1| ATP synthase subunit beta [Escherichia coli KTE28]
gi|430933034|gb|ELC53452.1| ATP synthase subunit beta [Escherichia coli KTE39]
gi|430936125|gb|ELC56417.1| ATP synthase subunit beta [Escherichia coli KTE44]
gi|430941776|gb|ELC61918.1| ATP synthase subunit beta [Escherichia coli KTE178]
gi|430950238|gb|ELC69626.1| ATP synthase subunit beta [Escherichia coli KTE187]
gi|430950642|gb|ELC69871.1| ATP synthase subunit beta [Escherichia coli KTE181]
gi|430959787|gb|ELC78093.1| ATP synthase subunit beta [Escherichia coli KTE188]
gi|430962903|gb|ELC80749.1| ATP synthase subunit beta [Escherichia coli KTE189]
gi|430970805|gb|ELC87850.1| ATP synthase subunit beta [Escherichia coli KTE191]
gi|430977155|gb|ELC94006.1| ATP synthase subunit beta [Escherichia coli KTE193]
gi|430979411|gb|ELC96196.1| ATP synthase subunit beta [Escherichia coli KTE201]
gi|430985497|gb|ELD02097.1| ATP synthase subunit beta [Escherichia coli KTE204]
gi|430991019|gb|ELD07439.1| ATP synthase subunit beta [Escherichia coli KTE205]
gi|430995544|gb|ELD11837.1| ATP synthase subunit beta [Escherichia coli KTE206]
gi|431001966|gb|ELD17536.1| ATP synthase subunit beta [Escherichia coli KTE208]
gi|431003463|gb|ELD18946.1| ATP synthase subunit beta [Escherichia coli KTE210]
gi|431013332|gb|ELD27065.1| ATP synthase subunit beta [Escherichia coli KTE212]
gi|431017283|gb|ELD30795.1| ATP synthase subunit beta [Escherichia coli KTE213]
gi|431020888|gb|ELD34223.1| ATP synthase subunit beta [Escherichia coli KTE214]
gi|431025967|gb|ELD39053.1| ATP synthase subunit beta [Escherichia coli KTE216]
gi|431035456|gb|ELD46846.1| ATP synthase subunit beta [Escherichia coli KTE220]
gi|431038827|gb|ELD49723.1| ATP synthase subunit beta [Escherichia coli KTE224]
gi|431047562|gb|ELD57560.1| ATP synthase subunit beta [Escherichia coli KTE230]
gi|431048213|gb|ELD58198.1| ATP synthase subunit beta [Escherichia coli KTE228]
gi|431066621|gb|ELD75245.1| ATP synthase subunit beta [Escherichia coli KTE235]
gi|431070715|gb|ELD79014.1| ATP synthase subunit beta [Escherichia coli KTE236]
gi|431076169|gb|ELD83679.1| ATP synthase subunit beta [Escherichia coli KTE237]
gi|431080948|gb|ELD87734.1| ATP synthase subunit beta [Escherichia coli KTE47]
gi|431088505|gb|ELD94383.1| ATP synthase subunit beta [Escherichia coli KTE49]
gi|431089691|gb|ELD95497.1| ATP synthase subunit beta [Escherichia coli KTE51]
gi|431097184|gb|ELE02633.1| ATP synthase subunit beta [Escherichia coli KTE53]
gi|431104759|gb|ELE09132.1| ATP synthase subunit beta [Escherichia coli KTE55]
gi|431111980|gb|ELE15870.1| ATP synthase subunit beta [Escherichia coli KTE56]
gi|431115171|gb|ELE18698.1| ATP synthase subunit beta [Escherichia coli KTE57]
gi|431117709|gb|ELE20937.1| ATP synthase subunit beta [Escherichia coli KTE58]
gi|431125858|gb|ELE28255.1| ATP synthase subunit beta [Escherichia coli KTE60]
gi|431127875|gb|ELE30169.1| ATP synthase subunit beta [Escherichia coli KTE62]
gi|431137046|gb|ELE38900.1| ATP synthase subunit beta [Escherichia coli KTE66]
gi|431144204|gb|ELE45911.1| ATP synthase subunit beta [Escherichia coli KTE67]
gi|431146768|gb|ELE48204.1| ATP synthase subunit beta [Escherichia coli KTE72]
gi|431150573|gb|ELE51623.1| ATP synthase subunit beta [Escherichia coli KTE75]
gi|431155645|gb|ELE56391.1| ATP synthase subunit beta [Escherichia coli KTE76]
gi|431160302|gb|ELE60817.1| ATP synthase subunit beta [Escherichia coli KTE77]
gi|431167077|gb|ELE67377.1| ATP synthase subunit beta [Escherichia coli KTE80]
gi|431168439|gb|ELE68685.1| ATP synthase subunit beta [Escherichia coli KTE81]
gi|431177194|gb|ELE77130.1| ATP synthase subunit beta [Escherichia coli KTE83]
gi|431178387|gb|ELE78300.1| ATP synthase subunit beta [Escherichia coli KTE86]
gi|431186516|gb|ELE86056.1| ATP synthase subunit beta [Escherichia coli KTE87]
gi|431188091|gb|ELE87590.1| ATP synthase subunit beta [Escherichia coli KTE93]
gi|431196689|gb|ELE95602.1| ATP synthase subunit beta [Escherichia coli KTE111]
gi|431197385|gb|ELE96237.1| ATP synthase subunit beta [Escherichia coli KTE116]
gi|431207538|gb|ELF05794.1| ATP synthase subunit beta [Escherichia coli KTE119]
gi|431210057|gb|ELF08122.1| ATP synthase subunit beta [Escherichia coli KTE142]
gi|431217108|gb|ELF14694.1| ATP synthase subunit beta [Escherichia coli KTE143]
gi|431219225|gb|ELF16643.1| ATP synthase subunit beta [Escherichia coli KTE156]
gi|431231253|gb|ELF27021.1| ATP synthase subunit beta [Escherichia coli KTE162]
gi|431234541|gb|ELF29940.1| ATP synthase subunit beta [Escherichia coli KTE161]
gi|431240369|gb|ELF34831.1| ATP synthase subunit beta [Escherichia coli KTE169]
gi|431240666|gb|ELF35117.1| ATP synthase subunit beta [Escherichia coli KTE171]
gi|431251859|gb|ELF45865.1| ATP synthase subunit beta [Escherichia coli KTE8]
gi|431254583|gb|ELF47851.1| ATP synthase subunit beta [Escherichia coli KTE6]
gi|431258517|gb|ELF51281.1| ATP synthase subunit beta [Escherichia coli KTE9]
gi|431262427|gb|ELF54417.1| ATP synthase subunit beta [Escherichia coli KTE17]
gi|431270957|gb|ELF62100.1| ATP synthase subunit beta [Escherichia coli KTE18]
gi|431271111|gb|ELF62253.1| ATP synthase subunit beta [Escherichia coli KTE45]
gi|431279342|gb|ELF70310.1| ATP synthase subunit beta [Escherichia coli KTE42]
gi|431281662|gb|ELF72565.1| ATP synthase subunit beta [Escherichia coli KTE23]
gi|431289618|gb|ELF80359.1| ATP synthase subunit beta [Escherichia coli KTE43]
gi|431293128|gb|ELF83508.1| ATP synthase subunit beta [Escherichia coli KTE29]
gi|431299589|gb|ELF89160.1| ATP synthase subunit beta [Escherichia coli KTE22]
gi|431305519|gb|ELF93842.1| ATP synthase subunit beta [Escherichia coli KTE46]
gi|431307171|gb|ELF95472.1| ATP synthase subunit beta [Escherichia coli KTE48]
gi|431321384|gb|ELG08985.1| ATP synthase subunit beta [Escherichia coli KTE50]
gi|431323407|gb|ELG10905.1| ATP synthase subunit beta [Escherichia coli KTE54]
gi|431324619|gb|ELG12071.1| ATP synthase subunit beta [Escherichia coli KTE59]
gi|431326052|gb|ELG13415.1| ATP synthase subunit beta [Escherichia coli KTE63]
gi|431334939|gb|ELG22083.1| ATP synthase subunit beta [Escherichia coli KTE65]
gi|431335593|gb|ELG22724.1| ATP synthase subunit beta [Escherichia coli KTE78]
gi|431345458|gb|ELG32379.1| ATP synthase subunit beta [Escherichia coli KTE84]
gi|431348052|gb|ELG34925.1| ATP synthase subunit beta [Escherichia coli KTE79]
gi|431352846|gb|ELG39611.1| ATP synthase subunit beta [Escherichia coli KTE91]
gi|431359946|gb|ELG46571.1| ATP synthase subunit beta [Escherichia coli KTE101]
gi|431360137|gb|ELG46750.1| ATP synthase subunit beta [Escherichia coli KTE115]
gi|431365415|gb|ELG51929.1| ATP synthase subunit beta [Escherichia coli KTE118]
gi|431377608|gb|ELG62734.1| ATP synthase subunit beta [Escherichia coli KTE123]
gi|431381756|gb|ELG66108.1| ATP synthase subunit beta [Escherichia coli KTE136]
gi|431382303|gb|ELG66643.1| ATP synthase subunit beta [Escherichia coli KTE135]
gi|431385831|gb|ELG69817.1| ATP synthase subunit beta [Escherichia coli KTE140]
gi|431392406|gb|ELG76005.1| ATP synthase subunit beta [Escherichia coli KTE141]
gi|431397035|gb|ELG80496.1| ATP synthase subunit beta [Escherichia coli KTE144]
gi|431401041|gb|ELG84395.1| ATP synthase subunit beta [Escherichia coli KTE146]
gi|431407832|gb|ELG91037.1| ATP synthase subunit beta [Escherichia coli KTE147]
gi|431413362|gb|ELG96152.1| ATP synthase subunit beta [Escherichia coli KTE158]
gi|431417351|gb|ELG99814.1| ATP synthase subunit beta [Escherichia coli KTE154]
gi|431422343|gb|ELH04536.1| ATP synthase subunit beta [Escherichia coli KTE192]
gi|431427346|gb|ELH09387.1| ATP synthase subunit beta [Escherichia coli KTE194]
gi|431430416|gb|ELH12248.1| ATP synthase subunit beta [Escherichia coli KTE165]
gi|431434918|gb|ELH16532.1| ATP synthase subunit beta [Escherichia coli KTE173]
gi|431435017|gb|ELH16630.1| ATP synthase subunit beta [Escherichia coli KTE190]
gi|431441015|gb|ELH22343.1| ATP synthase subunit beta [Escherichia coli KTE175]
gi|431452531|gb|ELH32975.1| ATP synthase subunit beta [Escherichia coli KTE196]
gi|431459612|gb|ELH39905.1| ATP synthase subunit beta [Escherichia coli KTE184]
gi|431460444|gb|ELH40733.1| ATP synthase subunit beta [Escherichia coli KTE183]
gi|431463576|gb|ELH43766.1| ATP synthase subunit beta [Escherichia coli KTE197]
gi|431467555|gb|ELH47563.1| ATP synthase subunit beta [Escherichia coli KTE202]
gi|431476993|gb|ELH56780.1| ATP synthase subunit beta [Escherichia coli KTE203]
gi|431479363|gb|ELH59106.1| ATP synthase subunit beta [Escherichia coli KTE207]
gi|431485634|gb|ELH65293.1| ATP synthase subunit beta [Escherichia coli KTE209]
gi|431488109|gb|ELH67746.1| ATP synthase subunit beta [Escherichia coli KTE211]
gi|431490644|gb|ELH70254.1| ATP synthase subunit beta [Escherichia coli KTE217]
gi|431494347|gb|ELH73936.1| ATP synthase subunit beta [Escherichia coli KTE215]
gi|431502219|gb|ELH81111.1| ATP synthase subunit beta [Escherichia coli KTE218]
gi|431504395|gb|ELH83021.1| ATP synthase subunit beta [Escherichia coli KTE223]
gi|431521327|gb|ELH98575.1| ATP synthase subunit beta [Escherichia coli KTE229]
gi|431521939|gb|ELH99175.1| ATP synthase subunit beta [Escherichia coli KTE227]
gi|431526365|gb|ELI03121.1| ATP synthase subunit beta [Escherichia coli KTE104]
gi|431526700|gb|ELI03443.1| ATP synthase subunit beta [Escherichia coli KTE105]
gi|431530745|gb|ELI07423.1| ATP synthase subunit beta [Escherichia coli KTE106]
gi|431540318|gb|ELI15945.1| ATP synthase subunit beta [Escherichia coli KTE109]
gi|431546142|gb|ELI20784.1| ATP synthase subunit beta [Escherichia coli KTE112]
gi|431548086|gb|ELI22374.1| ATP synthase subunit beta [Escherichia coli KTE113]
gi|431552479|gb|ELI26439.1| ATP synthase subunit beta [Escherichia coli KTE117]
gi|431561836|gb|ELI35193.1| ATP synthase subunit beta [Escherichia coli KTE120]
gi|431565402|gb|ELI38534.1| ATP synthase subunit beta [Escherichia coli KTE122]
gi|431565873|gb|ELI38948.1| ATP synthase subunit beta [Escherichia coli KTE124]
gi|431577932|gb|ELI50550.1| ATP synthase subunit beta [Escherichia coli KTE125]
gi|431578466|gb|ELI51069.1| ATP synthase subunit beta [Escherichia coli KTE128]
gi|431583309|gb|ELI55317.1| ATP synthase subunit beta [Escherichia coli KTE129]
gi|431593991|gb|ELI64282.1| ATP synthase subunit beta [Escherichia coli KTE131]
gi|431598074|gb|ELI67975.1| ATP synthase subunit beta [Escherichia coli KTE133]
gi|431600759|gb|ELI70426.1| ATP synthase subunit beta [Escherichia coli KTE137]
gi|431606861|gb|ELI76233.1| ATP synthase subunit beta [Escherichia coli KTE138]
gi|431612179|gb|ELI81430.1| ATP synthase subunit beta [Escherichia coli KTE139]
gi|431616104|gb|ELI85172.1| ATP synthase subunit beta [Escherichia coli KTE145]
gi|431623900|gb|ELI92526.1| ATP synthase subunit beta [Escherichia coli KTE148]
gi|431624778|gb|ELI93375.1| ATP synthase subunit beta [Escherichia coli KTE150]
gi|431630635|gb|ELI98964.1| ATP synthase subunit beta [Escherichia coli KTE153]
gi|431638878|gb|ELJ06756.1| ATP synthase subunit beta [Escherichia coli KTE157]
gi|431640253|gb|ELJ08014.1| ATP synthase subunit beta [Escherichia coli KTE160]
gi|431642678|gb|ELJ10400.1| ATP synthase subunit beta [Escherichia coli KTE163]
gi|431653194|gb|ELJ20306.1| ATP synthase subunit beta [Escherichia coli KTE166]
gi|431655874|gb|ELJ22904.1| ATP synthase subunit beta [Escherichia coli KTE167]
gi|431657565|gb|ELJ24529.1| ATP synthase subunit beta [Escherichia coli KTE168]
gi|431667194|gb|ELJ33786.1| ATP synthase subunit beta [Escherichia coli KTE174]
gi|431670083|gb|ELJ36442.1| ATP synthase subunit beta [Escherichia coli KTE176]
gi|431673297|gb|ELJ39524.1| ATP synthase subunit beta [Escherichia coli KTE177]
gi|431683657|gb|ELJ49286.1| ATP synthase subunit beta [Escherichia coli KTE179]
gi|431684082|gb|ELJ49703.1| ATP synthase subunit beta [Escherichia coli KTE180]
gi|431687775|gb|ELJ53317.1| ATP synthase subunit beta [Escherichia coli KTE232]
gi|431697718|gb|ELJ62816.1| ATP synthase subunit beta [Escherichia coli KTE82]
gi|431702189|gb|ELJ66990.1| ATP synthase subunit beta [Escherichia coli KTE88]
gi|431702452|gb|ELJ67252.1| ATP synthase subunit beta [Escherichia coli KTE85]
gi|431713070|gb|ELJ77329.1| ATP synthase subunit beta [Escherichia coli KTE90]
gi|431715953|gb|ELJ80096.1| ATP synthase subunit beta [Escherichia coli KTE95]
gi|431717041|gb|ELJ81144.1| ATP synthase subunit beta [Escherichia coli KTE94]
gi|431728173|gb|ELJ91894.1| ATP synthase subunit beta [Escherichia coli KTE97]
gi|431731447|gb|ELJ94948.1| ATP synthase subunit beta [Escherichia coli KTE99]
gi|432349451|gb|ELL43878.1| F0F1 ATP synthase subunit beta [Escherichia coli J96]
gi|441604431|emb|CCP98562.1| ATP synthase beta chain [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|441655415|emb|CCP99896.1| ATP synthase beta chain [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|441713464|emb|CCQ06575.1| ATP synthase beta chain [Escherichia coli Nissle 1917]
gi|443424323|gb|AGC89227.1| F0F1 ATP synthase subunit beta [Escherichia coli APEC O78]
gi|444534995|gb|ELV15155.1| ATP synthase F1, beta subunit [Escherichia coli 99.0814]
gi|444536710|gb|ELV16713.1| ATP synthase F1, beta subunit [Escherichia coli 09BKT078844]
gi|444545304|gb|ELV24225.1| ATP synthase F1, beta subunit [Escherichia coli 99.0815]
gi|444554652|gb|ELV32203.1| ATP synthase F1, beta subunit [Escherichia coli 99.0839]
gi|444572369|gb|ELV48802.1| ATP synthase F1, beta subunit [Escherichia coli 99.1775]
gi|444576123|gb|ELV52335.1| ATP synthase F1, beta subunit [Escherichia coli 99.1793]
gi|444588154|gb|ELV63542.1| ATP synthase F1, beta subunit [Escherichia coli 99.1805]
gi|444589381|gb|ELV64717.1| ATP synthase F1, beta subunit [Escherichia coli ATCC 700728]
gi|444589754|gb|ELV65082.1| ATP synthase F1, beta subunit [Escherichia coli PA11]
gi|444603642|gb|ELV78343.1| ATP synthase F1, beta subunit [Escherichia coli PA13]
gi|444603826|gb|ELV78521.1| ATP synthase F1, beta subunit [Escherichia coli PA19]
gi|444612697|gb|ELV86982.1| ATP synthase F1, beta subunit [Escherichia coli PA2]
gi|444619302|gb|ELV93349.1| ATP synthase F1, beta subunit [Escherichia coli PA47]
gi|444620747|gb|ELV94744.1| ATP synthase F1, beta subunit [Escherichia coli PA48]
gi|444627214|gb|ELW00992.1| ATP synthase F1, beta subunit [Escherichia coli PA8]
gi|444635519|gb|ELW08946.1| ATP synthase F1, beta subunit [Escherichia coli 7.1982]
gi|444637552|gb|ELW10924.1| ATP synthase F1, beta subunit [Escherichia coli 99.1781]
gi|444642358|gb|ELW15554.1| ATP synthase F1, beta subunit [Escherichia coli 99.1762]
gi|444651942|gb|ELW24727.1| ATP synthase F1, beta subunit [Escherichia coli PA35]
gi|444657204|gb|ELW29697.1| ATP synthase F1, beta subunit [Escherichia coli 3.4880]
gi|444659994|gb|ELW32379.1| ATP synthase F1, beta subunit [Escherichia coli 95.0083]
gi|444667079|gb|ELW39128.1| ATP synthase F1, beta subunit [Escherichia coli 99.0670]
gi|449313721|gb|EMD03915.1| F0F1 ATP synthase subunit beta [Escherichia coli O08]
gi|449314392|gb|EMD04560.1| F0F1 ATP synthase subunit beta [Escherichia coli S17]
gi|449316451|gb|EMD06567.1| F0F1 ATP synthase subunit beta [Escherichia coli SEPT362]
Length = 460
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 62 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|418305372|ref|ZP_12917166.1| ATP synthase F1, beta subunit [Escherichia coli UMNF18]
gi|339417470|gb|AEJ59142.1| ATP synthase F1, beta subunit [Escherichia coli UMNF18]
Length = 460
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 62 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|157144366|ref|YP_001451685.1| F0F1 ATP synthase subunit beta [Citrobacter koseri ATCC BAA-895]
gi|166201697|sp|A8ACN6.1|ATPB_CITK8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|157081571|gb|ABV11249.1| hypothetical protein CKO_00070 [Citrobacter koseri ATCC BAA-895]
Length = 460
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 62 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|206577341|ref|YP_002241287.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae 342]
gi|288937926|ref|YP_003441985.1| ATP synthase F1 subunit beta [Klebsiella variicola At-22]
gi|290511666|ref|ZP_06551034.1| ATP synthase F1, beta subunit [Klebsiella sp. 1_1_55]
gi|226740210|sp|B5XZM4.1|ATPB_KLEP3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|206566399|gb|ACI08175.1| ATP synthase F1, beta subunit [Klebsiella pneumoniae 342]
gi|288892635|gb|ADC60953.1| ATP synthase F1, beta subunit [Klebsiella variicola At-22]
gi|289775456|gb|EFD83456.1| ATP synthase F1, beta subunit [Klebsiella sp. 1_1_55]
Length = 460
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/358 (66%), Positives = 293/358 (81%), Gaps = 2/358 (0%)
Query: 557 IELFEINIIKYFRIINLKNN--ISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + + + + + ++N + + +VQQQ+G IVRTIA G+++G++R V D P
Sbjct: 16 VEFPQDAVPRVYEALEVQNGKEVLVLEVQQQLGGGIVRTIAMGSSDGLRRGLEVKDLEHP 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVID 674
I PVG TLGRI+NVLG P+D KG+I +++ IH P + + +LETGIKVID
Sbjct: 76 IEVPVGKATLGRIMNVLGQPVDMKGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVID 135
Query: 675 LLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMK 734
L+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM
Sbjct: 136 LMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMT 195
Query: 735 ESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEV 794
+SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEV
Sbjct: 196 DSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEV 255
Query: 795 SAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTH 854
SA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF H
Sbjct: 256 SALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315
Query: 855 LDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + E E+PVG LGRI+N G+ +D K + R + + AP +
Sbjct: 62 GLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQPVDMKGDIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|410447084|ref|ZP_11301186.1| ATP synthase F1, beta subunit [SAR86 cluster bacterium SAR86E]
gi|409980071|gb|EKO36823.1| ATP synthase F1, beta subunit [SAR86 cluster bacterium SAR86E]
Length = 465
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/363 (66%), Positives = 296/363 (81%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + NI + + I + + ++ +VQQQ+G+ IVR IA G T G+KR T PI
Sbjct: 16 VEFEKNNIPQVYEAIKITDTGTVLEVQQQLGDGIVRAIAMGTTEGLKRGLTAERTNAPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG+ TLGRI++VLG+PID G I + ++ PIH PP + +Q ++++LETGIKVIDL+
Sbjct: 76 VPVGEKTLGRIMDVLGNPIDECGPIGADEQMPIHRKPPSYMDQSLSDDLLETGIKVIDLI 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGKIGLFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFY+EM+ES
Sbjct: 136 CPFAKGGKIGLFGGAGVGKTVNMMELINNIATEHSGLSVFAGVGERTREGNDFYYEMQES 195
Query: 737 NVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
V++ KV+++YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TL
Sbjct: 196 GVVNVEKPSESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTL 255
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AG EVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+
Sbjct: 256 AGVEVSALLGRMPSAVGYQPTLAEEMGALQERITSTKDGSITSIQAVYVPADDLTDPSPA 315
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLD+T+VLSRQIAELGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQKYKE
Sbjct: 316 TTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGEEHYNVAQGVQGVLQKYKE 375
Query: 910 LKD 912
LKD
Sbjct: 376 LKD 378
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 146/350 (41%), Gaps = 40/350 (11%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + + L +G T +PVG + LGRI++ G ID + + +
Sbjct: 52 AIAMGTTEGLKRGLTAERTNAPISVPVGEKTLGRIMDVLGNPIDECGPIGADEQMPIHRK 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV- 286
P MD+ ++ L TGIK ID + P KG + + G GKT ++ I N ++
Sbjct: 112 PPSYMDQSLSDDLLETGIKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIATEHSG 171
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAE----QYISP-------- 334
+ ++ +G++ + YY + VV ++S Q P
Sbjct: 172 LSVFAGVGERTREGNDF-----YYEMQESGVVNVEKPSESKVAMVYGQMNEPPGNRLRVA 226
Query: 335 YTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLE 394
TG T+ E FRD G+D L+ D++ ++ A ++S LL R P V Y L E
Sbjct: 227 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGVEVSALLGR------MPSAVGY-QPTLAE 279
Query: 395 RSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFN 454
+ +++I + +G++T+ + D+T P + D + L +
Sbjct: 280 EMGAL------QERITSTKDGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAE 333
Query: 455 SNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESF 499
PA++ S SR V G Y + + + G +L +Y+EL+
Sbjct: 334 LGIYPAVDPLDSTSRQLDPLVVGEEHYNVAQGVQG----VLQKYKELKDI 379
>gi|308051487|ref|YP_003915053.1| ATP synthase F1 subcomplex subunit beta [Ferrimonas balearica DSM
9799]
gi|307633677|gb|ADN77979.1| ATP synthase F1 subcomplex beta subunit [Ferrimonas balearica DSM
9799]
Length = 460
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G + G++R +TG I PVG TLGRI+NVLG+PID G+
Sbjct: 42 EVQQQLGGGVVRTIAMGASEGLRRGLKATNTGNTIQVPVGTATLGRIMNVLGEPIDEAGD 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q +LETG+KVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWSIHREAPSYEDQSSATELLETGVKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMKESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA GIYPAIDPL+S
Sbjct: 282 RIASTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIAARGIYPAIDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY VA V+ LQ+YKELKD
Sbjct: 342 SRQLDPLVIGQEHYDVARGVQSVLQRYKELKD 373
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 146/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G K T ++PVG LGRI+N GE ID + R ++ + AP D+
Sbjct: 61 EGLRRGLKATNTGNTIQVPVGTATLGRIMNVLGEPIDEAGDIGEEERWSIHREAPSYEDQ 120
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
S E L TG+K ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 121 SSATELLETGVKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 180
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 181 GERTREGNDFYHEMKESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 240
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 241 FVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERIASTK 287
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ PAI+ S SR
Sbjct: 288 TGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIAARGIYPAIDPLDSTSRQLDP 347
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 348 LVIGQEHYDVARG----VQSVLQRYKELK 372
>gi|16762461|ref|NP_458078.1| ATP synthase F0F1 subunit beta [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16767149|ref|NP_462764.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29143949|ref|NP_807291.1| ATP synthase F0F1 subunit beta [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|62182347|ref|YP_218764.1| ATP synthase F0F1 subunit beta [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161505610|ref|YP_001572722.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:- str. RSK2980]
gi|161616985|ref|YP_001590950.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|168263239|ref|ZP_02685212.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168464800|ref|ZP_02698692.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194444846|ref|YP_002043111.1| ATP synthase F0F1 subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194450391|ref|YP_002047894.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194471110|ref|ZP_03077094.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194734293|ref|YP_002116806.1| ATP synthase F0F1 subunit beta [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197251677|ref|YP_002148800.1| ATP synthase F0F1 subunit beta [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197263502|ref|ZP_03163576.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|198245365|ref|YP_002217811.1| ATP synthase F0F1 subunit beta [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200387213|ref|ZP_03213825.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204928445|ref|ZP_03219644.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|207859088|ref|YP_002245739.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213052670|ref|ZP_03345548.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213427470|ref|ZP_03360220.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213586049|ref|ZP_03367875.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213857970|ref|ZP_03384941.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|224585660|ref|YP_002639459.1| ATP synthase F0F1 subunit beta [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238913118|ref|ZP_04656955.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|289826259|ref|ZP_06545371.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|340001333|ref|YP_004732217.1| ATP synthase subunit beta [Salmonella bongori NCTC 12419]
gi|374982730|ref|ZP_09724050.1| ATP synthase beta chain [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|375003732|ref|ZP_09728071.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|375116693|ref|ZP_09761863.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|375121330|ref|ZP_09766497.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|378447226|ref|YP_005234858.1| ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|378452773|ref|YP_005240133.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378701748|ref|YP_005183706.1| ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|378957293|ref|YP_005214780.1| ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|378961812|ref|YP_005219298.1| ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|378986567|ref|YP_005249723.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|378991167|ref|YP_005254331.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379703128|ref|YP_005244856.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383498492|ref|YP_005399181.1| ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|386593535|ref|YP_006089935.1| ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|409247556|ref|YP_006888253.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|416421104|ref|ZP_11689289.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|416432518|ref|ZP_11696243.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|416437710|ref|ZP_11698996.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|416443043|ref|ZP_11702753.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|416450196|ref|ZP_11707329.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|416461157|ref|ZP_11715205.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|416464006|ref|ZP_11716170.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|416479692|ref|ZP_11722475.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|416489178|ref|ZP_11726053.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|416501076|ref|ZP_11731881.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|416508452|ref|ZP_11736088.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416517506|ref|ZP_11739516.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416531269|ref|ZP_11745554.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|416540223|ref|ZP_11750345.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|416540569|ref|ZP_11750425.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|416548688|ref|ZP_11754978.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|416556843|ref|ZP_11759167.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|416567552|ref|ZP_11764324.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|416581057|ref|ZP_11772318.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|416582856|ref|ZP_11773020.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|416593056|ref|ZP_11779609.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|416602752|ref|ZP_11785417.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|416603628|ref|ZP_11785563.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|416613027|ref|ZP_11791930.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|416625012|ref|ZP_11798410.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|416626829|ref|ZP_11798836.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|416641383|ref|ZP_11805470.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|416649733|ref|ZP_11810060.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416658345|ref|ZP_11814242.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|416664780|ref|ZP_11816324.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|416682246|ref|ZP_11823965.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|416698015|ref|ZP_11828299.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|416703481|ref|ZP_11829608.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|416711846|ref|ZP_11835591.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|416716075|ref|ZP_11838586.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|416726972|ref|ZP_11847001.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|416730499|ref|ZP_11848654.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416739905|ref|ZP_11854072.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416744294|ref|ZP_11856561.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416755086|ref|ZP_11861819.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|416760554|ref|ZP_11864879.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416769833|ref|ZP_11871271.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|417361658|ref|ZP_12135496.1| ATP synthase subunit B [Salmonella enterica subsp. enterica serovar
Give str. S5-487]
gi|417369273|ref|ZP_12140517.1| ATP synthase subunit A [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|417489539|ref|ZP_12172853.1| ATP synthase subunit B [Salmonella enterica subsp. enterica serovar
Rubislaw str. A4-653]
gi|417521581|ref|ZP_12183249.1| ATP synthase beta chain [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|418483059|ref|ZP_13052070.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|418489279|ref|ZP_13056404.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418495991|ref|ZP_13062428.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418501510|ref|ZP_13067894.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418503478|ref|ZP_13069841.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418506268|ref|ZP_13072602.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418514339|ref|ZP_13080546.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|418526561|ref|ZP_13092536.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|418760189|ref|ZP_13316348.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418766315|ref|ZP_13322393.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418771123|ref|ZP_13327137.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418777106|ref|ZP_13333041.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418782045|ref|ZP_13337913.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418782738|ref|ZP_13338597.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418787220|ref|ZP_13343024.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|418791557|ref|ZP_13347315.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|418797145|ref|ZP_13352835.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|418804121|ref|ZP_13359731.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|418807051|ref|ZP_13362619.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418811212|ref|ZP_13366748.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418814377|ref|ZP_13369893.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418819351|ref|ZP_13374803.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418825407|ref|ZP_13380701.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|418829292|ref|ZP_13384276.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418834906|ref|ZP_13389807.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|418839192|ref|ZP_13394031.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418845823|ref|ZP_13400601.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|418849517|ref|ZP_13404248.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|418854142|ref|ZP_13408822.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|418860051|ref|ZP_13414637.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|418864829|ref|ZP_13419350.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|418868067|ref|ZP_13422511.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|419729959|ref|ZP_14256913.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419734382|ref|ZP_14261274.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419737924|ref|ZP_14264693.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419744024|ref|ZP_14270684.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419749686|ref|ZP_14276164.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|419788116|ref|ZP_14313814.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419791032|ref|ZP_14316688.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|421356485|ref|ZP_15806807.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|421361001|ref|ZP_15811271.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421366001|ref|ZP_15816207.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421373139|ref|ZP_15823283.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421377353|ref|ZP_15827450.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|421379314|ref|ZP_15829384.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|421386638|ref|ZP_15836648.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|421390881|ref|ZP_15840855.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|421392705|ref|ZP_15842656.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|421397329|ref|ZP_15847246.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|421404321|ref|ZP_15854164.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|421406316|ref|ZP_15856131.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|421410654|ref|ZP_15860431.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421417823|ref|ZP_15867532.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|421422851|ref|ZP_15872517.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|421426937|ref|ZP_15876564.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|421428899|ref|ZP_15878501.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|421435988|ref|ZP_15885523.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|421437958|ref|ZP_15887463.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421445083|ref|ZP_15894512.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|421450033|ref|ZP_15899412.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|421576300|ref|ZP_16021902.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|421581721|ref|ZP_16027263.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|421582352|ref|ZP_16027890.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|421886795|ref|ZP_16317965.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|422028112|ref|ZP_16374431.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|422033159|ref|ZP_16379247.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|423142353|ref|ZP_17129991.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. houtenae
str. ATCC BAA-1581]
gi|427556222|ref|ZP_18929753.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|427573611|ref|ZP_18934344.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|427595109|ref|ZP_18939259.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|427619846|ref|ZP_18944174.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|427643202|ref|ZP_18949029.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|427658131|ref|ZP_18953753.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|427663385|ref|ZP_18958653.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|427679884|ref|ZP_18963547.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|436783451|ref|ZP_20521240.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|436800006|ref|ZP_20524210.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436809642|ref|ZP_20528989.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|436817708|ref|ZP_20534597.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|436831604|ref|ZP_20536265.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436847746|ref|ZP_20539808.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436855358|ref|ZP_20544613.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436862384|ref|ZP_20549115.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436868315|ref|ZP_20553161.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436880647|ref|ZP_20560335.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|436886056|ref|ZP_20562620.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436893088|ref|ZP_20567135.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436905837|ref|ZP_20574813.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436913632|ref|ZP_20578923.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|436916035|ref|ZP_20580181.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436927625|ref|ZP_20587376.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436936841|ref|ZP_20592194.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436943818|ref|ZP_20596641.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|436952346|ref|ZP_20601127.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436962328|ref|ZP_20605506.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436971772|ref|ZP_20609998.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436977014|ref|ZP_20612187.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|436999161|ref|ZP_20620071.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437002052|ref|ZP_20621205.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|437013279|ref|ZP_20625147.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|437028814|ref|ZP_20630812.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437040230|ref|ZP_20634617.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437047442|ref|ZP_20638887.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437061097|ref|ZP_20646813.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|437067220|ref|ZP_20650238.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|437076660|ref|ZP_20655003.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|437079911|ref|ZP_20656786.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|437087292|ref|ZP_20661102.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|437100915|ref|ZP_20666170.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|437121722|ref|ZP_20671899.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|437127370|ref|ZP_20674717.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437135003|ref|ZP_20679148.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|437147282|ref|ZP_20686811.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|437153991|ref|ZP_20690851.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|437163528|ref|ZP_20696710.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437164547|ref|ZP_20697185.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|437178270|ref|ZP_20704579.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|437181614|ref|ZP_20706639.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|437200109|ref|ZP_20711613.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|437261458|ref|ZP_20718506.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|437270693|ref|ZP_20723363.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|437279477|ref|ZP_20727725.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|437283708|ref|ZP_20729241.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|437304729|ref|ZP_20734070.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|437329325|ref|ZP_20741282.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|437336225|ref|ZP_20742946.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|437362678|ref|ZP_20748421.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|437418612|ref|ZP_20754279.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|437446526|ref|ZP_20758788.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|437458938|ref|ZP_20760907.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|437471494|ref|ZP_20765261.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|437493525|ref|ZP_20772176.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|437503066|ref|ZP_20774777.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|437522092|ref|ZP_20778976.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|437561177|ref|ZP_20786345.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437569771|ref|ZP_20788059.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437592775|ref|ZP_20795236.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437598806|ref|ZP_20796780.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437624223|ref|ZP_20805206.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437637832|ref|ZP_20807421.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|437655399|ref|ZP_20810454.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|437680096|ref|ZP_20818305.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|437699217|ref|ZP_20823408.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|437714678|ref|ZP_20827716.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|437734102|ref|ZP_20832157.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|437768142|ref|ZP_20835281.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|437801877|ref|ZP_20838242.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|437835338|ref|ZP_20845258.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|437980389|ref|ZP_20853264.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|438090354|ref|ZP_20860560.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|438097457|ref|ZP_20862379.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|438107584|ref|ZP_20866796.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|438136170|ref|ZP_20874357.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|440762618|ref|ZP_20941672.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|440770685|ref|ZP_20949633.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|440775214|ref|ZP_20954098.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|445142710|ref|ZP_21386201.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|445153254|ref|ZP_21391326.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|445167426|ref|ZP_21394413.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|445181314|ref|ZP_21398293.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|445223218|ref|ZP_21403424.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445246927|ref|ZP_21408365.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|445329775|ref|ZP_21413632.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445346067|ref|ZP_21418591.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445359821|ref|ZP_21423209.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|452122344|ref|YP_007472592.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
gi|75505463|sp|Q57HX9.1|ATPB_SALCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|81832703|sp|Q7CPE2.1|ATPB_SALTY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|81849133|sp|Q8XGX4.1|ATPB_SALTI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|189081341|sp|A9MJR9.1|ATPB_SALAR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|189081342|sp|A9MXA6.1|ATPB_SALPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740666|sp|B5EYZ6.1|ATPB_SALA4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740667|sp|B5FN33.1|ATPB_SALDC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740668|sp|B5QUS4.1|ATPB_SALEP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740670|sp|B4TAX2.1|ATPB_SALHS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740671|sp|B4SYD1.1|ATPB_SALNS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740673|sp|B4TN31.1|ATPB_SALSV RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|254808162|sp|C0Q2N2.1|ATPB_SALPC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|25290439|pir||AF0954 ATP synthase beta chain [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16422439|gb|AAL22723.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|16504766|emb|CAD03130.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139585|gb|AAO71151.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|62129980|gb|AAX67683.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|160866957|gb|ABX23580.1| hypothetical protein SARI_03786 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
gi|161366349|gb|ABX70117.1| hypothetical protein SPAB_04806 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194403509|gb|ACF63731.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194408695|gb|ACF68914.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194457474|gb|EDX46313.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194709795|gb|ACF89016.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195632484|gb|EDX50968.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197215380|gb|ACH52777.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197241757|gb|EDY24377.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197939881|gb|ACH77214.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199604311|gb|EDZ02856.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204321878|gb|EDZ07076.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205348072|gb|EDZ34703.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206710891|emb|CAR35255.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224470188|gb|ACN48018.1| ATP synthase subunit B [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|261249005|emb|CBG26863.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996152|gb|ACY91037.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160397|emb|CBW19923.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914996|dbj|BAJ38970.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320088290|emb|CBY98051.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321222161|gb|EFX47234.1| ATP synthase beta chain [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322617222|gb|EFY14127.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322619090|gb|EFY15976.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625157|gb|EFY21985.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322630208|gb|EFY26979.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322634367|gb|EFY31101.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322635251|gb|EFY31966.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642872|gb|EFY39457.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322645076|gb|EFY41606.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322650425|gb|EFY46837.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322653617|gb|EFY49944.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322661555|gb|EFY57778.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322661637|gb|EFY57856.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322669799|gb|EFY65941.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322671992|gb|EFY68111.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322674997|gb|EFY71083.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322683687|gb|EFY79700.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686074|gb|EFY82059.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|322716839|gb|EFZ08410.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|323132227|gb|ADX19657.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|323192009|gb|EFZ77246.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323200503|gb|EFZ85581.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202732|gb|EFZ87769.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323211744|gb|EFZ96577.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323218606|gb|EGA03313.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323220007|gb|EGA04477.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323224778|gb|EGA09043.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323232514|gb|EGA16616.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323235289|gb|EGA19374.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323241077|gb|EGA25114.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323241374|gb|EGA25406.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323248604|gb|EGA32534.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252097|gb|EGA35957.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323258599|gb|EGA42262.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323262369|gb|EGA45927.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323268206|gb|EGA51682.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323270620|gb|EGA54065.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|326625597|gb|EGE31942.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|332990714|gb|AEF09697.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|339514695|emb|CCC32465.1| ATP synthase beta subunit [Salmonella bongori NCTC 12419]
gi|353074647|gb|EHB40408.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|353583364|gb|EHC43740.1| ATP synthase subunit B [Salmonella enterica subsp. enterica serovar
Give str. S5-487]
gi|353584604|gb|EHC44671.1| ATP synthase subunit A [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353631464|gb|EHC78761.1| ATP synthase subunit B [Salmonella enterica subsp. enterica serovar
Rubislaw str. A4-653]
gi|353641113|gb|EHC85928.1| ATP synthase beta chain [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|357207904|gb|AET55950.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|363549513|gb|EHL33853.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|363552275|gb|EHL36568.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363559265|gb|EHL43433.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|363560455|gb|EHL44600.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363570810|gb|EHL54732.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|363578694|gb|EHL62497.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|363579207|gb|EHL62999.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|366058020|gb|EHN22313.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366062042|gb|EHN26281.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|366066347|gb|EHN30518.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366068830|gb|EHN32963.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366072878|gb|EHN36960.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366079360|gb|EHN43346.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366083405|gb|EHN47327.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366828617|gb|EHN55499.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372205523|gb|EHP19032.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|374355684|gb|AEZ47445.1| ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|379050282|gb|EHY68175.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. houtenae
str. ATCC BAA-1581]
gi|379983601|emb|CCF90238.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|380465313|gb|AFD60716.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|381295430|gb|EIC36543.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381297854|gb|EIC38939.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381303799|gb|EIC44817.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381310401|gb|EIC51231.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|381310513|gb|EIC51341.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|383800576|gb|AFH47658.1| ATP synthase beta chain [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|392618335|gb|EIX00737.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392621387|gb|EIX03745.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392735139|gb|EIZ92319.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392738367|gb|EIZ95512.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392743352|gb|EJA00425.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392744667|gb|EJA01712.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392744944|gb|EJA01985.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392759193|gb|EJA16048.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392766548|gb|EJA23322.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|392769499|gb|EJA26231.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|392771661|gb|EJA28378.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|392771768|gb|EJA28481.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|392780124|gb|EJA36781.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392781150|gb|EJA37795.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392794431|gb|EJA50846.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392794982|gb|EJA51367.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392804512|gb|EJA60670.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392804669|gb|EJA60818.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392812087|gb|EJA68083.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392813276|gb|EJA69245.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392814915|gb|EJA70860.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|392821119|gb|EJA76950.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392825210|gb|EJA80964.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|392827961|gb|EJA83659.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|392829708|gb|EJA85372.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|392838524|gb|EJA94086.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|395991623|gb|EJI00746.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395993958|gb|EJI03047.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|395994142|gb|EJI03222.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|395998197|gb|EJI07230.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|395999031|gb|EJI08054.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|396006942|gb|EJI15902.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|396011958|gb|EJI20858.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|396013052|gb|EJI21941.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|396020222|gb|EJI29068.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|396026321|gb|EJI35090.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|396034072|gb|EJI42775.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|396034247|gb|EJI42948.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|396038948|gb|EJI47579.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|396039515|gb|EJI48140.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|396048127|gb|EJI56687.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396053388|gb|EJI61884.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|396055667|gb|EJI64150.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|396060494|gb|EJI68938.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|396066399|gb|EJI74763.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|396067996|gb|EJI76345.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|396074711|gb|EJI82996.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|402516331|gb|EJW23743.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|402518955|gb|EJW26321.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|402533170|gb|EJW40353.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|414012653|gb|EKS96566.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|414013798|gb|EKS97671.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|414014187|gb|EKS98039.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|414027658|gb|EKT10875.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|414028595|gb|EKT11774.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|414031015|gb|EKT14094.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|414042039|gb|EKT24590.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|414042820|gb|EKT25350.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|414047172|gb|EKT29467.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|414055834|gb|EKT37701.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|434940580|gb|ELL47185.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|434959017|gb|ELL52528.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|434959372|gb|ELL52846.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434966156|gb|ELL59043.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|434971249|gb|ELL63783.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|434982008|gb|ELL73848.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434991223|gb|ELL82737.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434992505|gb|ELL83954.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434999040|gb|ELL90248.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435004344|gb|ELL95318.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|435004863|gb|ELL95805.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|435012240|gb|ELM02925.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435015373|gb|ELM05912.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435019792|gb|ELM10227.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435023984|gb|ELM14217.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|435033312|gb|ELM23215.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435035883|gb|ELM25722.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435037433|gb|ELM27244.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435041665|gb|ELM31405.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|435049525|gb|ELM39051.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435049733|gb|ELM39248.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435056219|gb|ELM45611.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435060722|gb|ELM49968.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435071049|gb|ELM60007.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435074345|gb|ELM63178.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|435084039|gb|ELM72633.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435087057|gb|ELM75576.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|435087567|gb|ELM76063.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435089780|gb|ELM78198.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|435096611|gb|ELM84878.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|435100369|gb|ELM88546.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435104420|gb|ELM92474.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|435114154|gb|ELN01967.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|435118282|gb|ELN05949.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|435124288|gb|ELN11754.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|435125332|gb|ELN12776.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|435129642|gb|ELN16931.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435134122|gb|ELN21256.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|435139031|gb|ELN26037.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|435140687|gb|ELN27647.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|435140836|gb|ELN27780.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435153572|gb|ELN40179.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|435154826|gb|ELN41385.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|435162812|gb|ELN48970.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|435166128|gb|ELN52129.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|435170830|gb|ELN56557.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|435170898|gb|ELN56623.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|435186679|gb|ELN71497.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|435187646|gb|ELN72390.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|435190427|gb|ELN75014.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|435197655|gb|ELN81932.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|435201844|gb|ELN85717.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|435209793|gb|ELN93080.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|435209897|gb|ELN93177.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|435216930|gb|ELN99392.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|435222598|gb|ELO04695.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|435227072|gb|ELO08605.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|435227843|gb|ELO09295.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|435237240|gb|ELO17936.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|435237841|gb|ELO18498.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435250026|gb|ELO29781.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435250750|gb|ELO30468.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|435252846|gb|ELO32339.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435254351|gb|ELO33753.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435263773|gb|ELO42807.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435271791|gb|ELO50230.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|435272889|gb|ELO51264.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|435274662|gb|ELO52761.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435278994|gb|ELO56815.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|435285899|gb|ELO63259.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|435286844|gb|ELO64084.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|435300549|gb|ELO76632.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|435303816|gb|ELO79648.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|435307278|gb|ELO82456.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|435316448|gb|ELO89586.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|435326982|gb|ELO98761.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|435333411|gb|ELP04230.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|435338213|gb|ELP07558.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|436410968|gb|ELP08925.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|436411381|gb|ELP09333.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|436422731|gb|ELP20559.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|444849196|gb|ELX74311.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|444852909|gb|ELX77983.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|444865306|gb|ELX90080.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|444869305|gb|ELX93898.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444871672|gb|ELX96074.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|444878355|gb|ELY02474.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444878520|gb|ELY02635.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444885406|gb|ELY09197.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|444890216|gb|ELY13571.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|451911348|gb|AGF83154.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
Length = 460
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 62 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|88860637|ref|ZP_01135274.1| ATP synthase subunit B [Pseudoalteromonas tunicata D2]
gi|88817232|gb|EAR27050.1| ATP synthase subunit B [Pseudoalteromonas tunicata D2]
Length = 461
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G T+G++R V +TGK I PVG TLGRI+NVLG+PID G
Sbjct: 43 EVQQQLGGGVVRGIALGTTDGLRRGATVQNTGKAIQVPVGKATLGRIMNVLGEPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERMSIHRAAPSYEEQSSSIELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RIASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSS 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGQEHYDAARGVQTVLQRYKELKD 374
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K ++PVG LGRI+N GE ID + R ++ + AP ++
Sbjct: 63 GLRRGATVQNTGKAIQVPVGKATLGRIMNVLGEPIDEAGPIGEEERMSIHRAAPSYEEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 123 SSIELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 183 ERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 243 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERIASTKT 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDPL 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 350 VIGQEHYDAARG----VQTVLQRYKELK 373
>gi|436592307|ref|ZP_20512160.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|434978669|gb|ELL70669.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
Length = 460
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 62 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|112791338|gb|ABI21939.1| ATP synthase beta subunit, partial [Enterobacter cloacae subsp.
dissolvens]
Length = 421
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/338 (71%), Positives = 283/338 (83%)
Query: 575 NNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDP 634
N + +VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG P
Sbjct: 11 NESLVLEVQQQLGGGIVRTIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQP 70
Query: 635 IDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVG 694
ID KG+I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVG
Sbjct: 71 IDMKGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVG 130
Query: 695 KTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSG 754
KTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP G
Sbjct: 131 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPG 190
Query: 755 NRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
NRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 191 NRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 250
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+
Sbjct: 251 MGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAV 310
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 311 DPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 348
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + E E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 37 GLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 217 VDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDTARG----VQSLLQRYQELK 347
>gi|6625703|gb|AAF19362.1|AF188265_8 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Typhimurium]
Length = 460
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 62 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|56415733|ref|YP_152808.1| ATP synthase F0F1 subunit beta [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197364661|ref|YP_002144298.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|81599724|sp|Q5PKX2.1|ATPB_SALPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740672|sp|B5BIN6.1|ATPB_SALPK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|56129990|gb|AAV79496.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197096138|emb|CAR61734.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 460
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 62 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|300115592|ref|YP_003762167.1| ATP synthase F1 subunit beta [Nitrosococcus watsonii C-113]
gi|299541529|gb|ADJ29846.1| ATP synthase F1, beta subunit [Nitrosococcus watsonii C-113]
Length = 458
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G ++G++R V +TG PI PVG TLGRI++VLG+P+D G
Sbjct: 40 EVQQQLGDGVVRTIAMGGSDGLRRGMAVTNTGAPISVPVGTKTLGRIMDVLGEPVDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWSIHRKAPAYEELSPATELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA EH G SVF GVGER+REGNDFYHEMK+S VLDKVSL+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIATEHSGYSVFAGVGERTREGNDFYHEMKDSQVLDKVSLVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEFFREEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELGIYPA+DPL+S
Sbjct: 280 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP IVG+EHY+VA V+ LQ+YKELKD
Sbjct: 340 SRQLDPLIVGQEHYQVARAVQGNLQRYKELKD 371
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG + LGRI++ GE +D + R ++ + AP +
Sbjct: 60 GLRRGMAVTNTGAPISVPVGTKTLGRIMDVLGEPVDEAGPIGEEERWSIHRKAPAYEELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N ++ ++ +G
Sbjct: 120 PATELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K +D +V + + TG T+ E+FR+ G+D L+
Sbjct: 180 ERTREGNDFYHEMKDSQVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEFFREEGRDVLLF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 240 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 287 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y++ + + G+ L +Y+EL+
Sbjct: 347 IVGQEHYQVARAVQGN----LQRYKELK 370
>gi|300916399|ref|ZP_07133139.1| ATP synthase F1, beta subunit [Escherichia coli MS 115-1]
gi|425290953|ref|ZP_18681762.1| ATP synthase F1, beta subunit [Escherichia coli 3006]
gi|432528603|ref|ZP_19765673.1| ATP synthase subunit beta [Escherichia coli KTE233]
gi|432536263|ref|ZP_19773200.1| ATP synthase subunit beta [Escherichia coli KTE234]
gi|300416303|gb|EFJ99613.1| ATP synthase F1, beta subunit [Escherichia coli MS 115-1]
gi|408208974|gb|EKI33587.1| ATP synthase F1, beta subunit [Escherichia coli 3006]
gi|431056832|gb|ELD66324.1| ATP synthase subunit beta [Escherichia coli KTE234]
gi|431059718|gb|ELD69065.1| ATP synthase subunit beta [Escherichia coli KTE233]
Length = 460
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 62 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|112791372|gb|ABI21956.1| ATP synthase beta subunit, partial [Brenneria nigrifluens]
Length = 421
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G++R V + G PI PVG TLGRI+NVLG+P+D KG+
Sbjct: 17 EVQQQLGGGVVRCIAMGSSDGLRRGLKVTNQGHPIEVPVGKATLGRIMNVLGEPVDMKGD 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + + IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEDRWAIHREAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K E+PVG LGRI+N GE +D K ++R + + AP +
Sbjct: 37 GLRRGLKVTNQGHPIEVPVGKATLGRIMNVLGEPVDMKGDIGEEDRWAIHREAPSYEELS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 SSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTESNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 217 IDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDVARG----VQSILQRYQELK 347
>gi|422016808|ref|ZP_16363386.1| F0F1 ATP synthase subunit beta [Providencia burhodogranariea DSM
19968]
gi|414091686|gb|EKT53368.1| F0F1 ATP synthase subunit beta [Providencia burhodogranariea DSM
19968]
Length = 460
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/345 (69%), Positives = 286/345 (82%), Gaps = 1/345 (0%)
Query: 568 FRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRI 627
++N K + + +VQQQ+G +VR IA G ++G+ R IV D PI PVG TLGRI
Sbjct: 30 LEVMNGKEKLVL-EVQQQLGGGVVRCIAMGTSDGLSRGLIVTDLENPIEVPVGKATLGRI 88
Query: 628 LNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGL 687
+NVLG PID KG+I +++ IH P + + +LETGIKV+DL+CPF KGGK+GL
Sbjct: 89 MNVLGQPIDMKGDIGEEERWSIHRAAPSYEELSSSTELLETGIKVMDLICPFAKGGKVGL 148
Query: 688 FGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYG 747
FGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YG
Sbjct: 149 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 208
Query: 748 QMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY 807
QMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGY
Sbjct: 209 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGY 268
Query: 808 QPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAE 867
QPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA
Sbjct: 269 QPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAS 328
Query: 868 LGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 329 LGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKD 373
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G E E+PVG LGRI+N G+ ID K + R ++ + AP +
Sbjct: 62 GLSRGLIVTDLENPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWSIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSTELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|419193811|ref|ZP_13737252.1| ATP synthase F1, beta subunit [Escherichia coli DEC7E]
gi|378035180|gb|EHV97740.1| ATP synthase F1, beta subunit [Escherichia coli DEC7E]
Length = 460
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 62 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|387891217|ref|YP_006321515.1| ATP synthase subunit beta [Escherichia blattae DSM 4481]
gi|414595045|ref|ZP_11444676.1| ATP synthase subunit beta [Escherichia blattae NBRC 105725]
gi|386926050|gb|AFJ49004.1| ATP synthase beta chain [Escherichia blattae DSM 4481]
gi|403193965|dbj|GAB82328.1| ATP synthase subunit beta [Escherichia blattae NBRC 105725]
Length = 460
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/358 (67%), Positives = 291/358 (81%), Gaps = 2/358 (0%)
Query: 557 IELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + + K + + +KN + +VQQQ+G +VRTIA G ++G+ R V + P
Sbjct: 16 VEFPQDAVPKVYDALEVKNGKETLVLEVQQQLGGGVVRTIAMGTSDGLSRGLEVANLDHP 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVID 674
I PVG TLGRI+NVLG P+D KG+I +++ IH P + + +LETGIKV+D
Sbjct: 76 IEVPVGKATLGRIMNVLGQPVDMKGDIGEEERWAIHRAAPSYEELSNSQELLETGIKVMD 135
Query: 675 LLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMK 734
L+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM
Sbjct: 136 LICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMT 195
Query: 735 ESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEV 794
ESNVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEV
Sbjct: 196 ESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEV 255
Query: 795 SAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTH 854
SA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF H
Sbjct: 256 SALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315
Query: 855 LDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKD 373
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G + + E+PVG LGRI+N G+ +D K + R + + AP +
Sbjct: 62 GLSRGLEVANLDHPIEVPVGKATLGRIMNVLGQPVDMKGDIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 242 IDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|197286889|ref|YP_002152761.1| F0F1 ATP synthase subunit beta [Proteus mirabilis HI4320]
gi|227354878|ref|ZP_03839293.1| H(+)-transporting two-sector ATPase [Proteus mirabilis ATCC 29906]
gi|425070602|ref|ZP_18473714.1| ATP synthase subunit beta [Proteus mirabilis WGLW6]
gi|425070838|ref|ZP_18473944.1| ATP synthase subunit beta [Proteus mirabilis WGLW4]
gi|226740661|sp|B4F0E7.1|ATPB_PROMH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|194684376|emb|CAR46024.1| ATP synthase beta chain [Proteus mirabilis HI4320]
gi|227165031|gb|EEI49867.1| H(+)-transporting two-sector ATPase [Proteus mirabilis ATCC 29906]
gi|404594505|gb|EKA95082.1| ATP synthase subunit beta [Proteus mirabilis WGLW6]
gi|404599663|gb|EKB00116.1| ATP synthase subunit beta [Proteus mirabilis WGLW4]
Length = 460
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/345 (70%), Positives = 287/345 (83%), Gaps = 1/345 (0%)
Query: 568 FRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRI 627
++N K + + +VQQQ+G IVR IA G ++G+ R V D G PI PVG TLGRI
Sbjct: 30 LEVMNGKEKLVL-EVQQQLGGGIVRCIAMGTSDGLSRGLKVEDLGHPIEVPVGKATLGRI 88
Query: 628 LNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGL 687
+NVLG PID KGEI ++++ IH P + + +LETGIKV+DL+CPF KGGK+GL
Sbjct: 89 MNVLGTPIDMKGEIETEERWSIHREAPTYEELSNSQELLETGIKVMDLICPFAKGGKVGL 148
Query: 688 FGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYG 747
FGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YG
Sbjct: 149 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 208
Query: 748 QMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY 807
QMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGY
Sbjct: 209 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGY 268
Query: 808 QPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAE 867
QPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA
Sbjct: 269 QPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAS 328
Query: 868 LGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 329 LGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKD 373
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G K E+PVG LGRI+N G ID K + + R ++ + AP +
Sbjct: 62 GLSRGLKVEDLGHPIEVPVGKATLGRIMNVLGTPIDMKGEIETEERWSIHREAPTYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|397163089|ref|ZP_10486554.1| ATP synthase F1, beta subunit [Enterobacter radicincitans DSM
16656]
gi|396095236|gb|EJI92781.1| ATP synthase F1, beta subunit [Enterobacter radicincitans DSM
16656]
Length = 460
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KG+
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGD 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPTYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDVARGVQSLLQRYQELKD 373
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + E E+PVG LGRI+N GE +D K + R + + AP +
Sbjct: 62 GLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGDIGEEERWAIHRAAPTYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSLLQRYQELK 372
>gi|372277355|ref|ZP_09513391.1| F0F1 ATP synthase subunit beta [Pantoea sp. SL1_M5]
gi|390437504|ref|ZP_10226042.1| membrane-bound ATP synthase, F1 sector subunit beta [Pantoea
agglomerans IG1]
Length = 465
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/337 (71%), Positives = 282/337 (83%), Gaps = 5/337 (1%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G ++G+KR V D KPI PVG TLGRI+NVLG+PID KGE
Sbjct: 42 EVQQQLGGGVVRTIAMGTSDGLKRGLSVNDLQKPIQVPVGKATLGRIMNVLGEPIDMKGE 101
Query: 641 INSKKKSP-----IHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGK 695
+ + S IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGK
Sbjct: 102 LKEEDGSAVEIASIHRAAPSYEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGK 161
Query: 696 TVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGN 755
TVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM +SNV+DKV+L+YGQMNEP GN
Sbjct: 162 TVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGN 221
Query: 756 RLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEM 815
RLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEM
Sbjct: 222 RLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEM 281
Query: 816 GKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
G LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLDST+ LSRQIA LGIYPA+D
Sbjct: 282 GVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVD 341
Query: 876 PLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
PL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 342 PLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQELKD 378
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 146/333 (43%), Gaps = 28/333 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVE-----KIAPG 230
L +G +K ++PVG LGRI+N GE ID K + ++ VE + AP
Sbjct: 62 GLKRGLSVNDLQKPIQVPVGKATLGRIMNVLGEPIDMKGELKEEDGSAVEIASIHRAAPS 121
Query: 231 IMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICI 289
D+ + E L TGIK ID M P KG + + G GKT ++ I N + +
Sbjct: 122 YEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSV 181
Query: 290 YVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQ 349
+ +G++ + +++ N +D +V + + TG T+ E FRD G+
Sbjct: 182 FAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 241
Query: 350 DCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKI 409
D L+ D++ ++ A ++S LL R P V Y L E + +++I
Sbjct: 242 DVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERI 288
Query: 410 FNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSR 348
Query: 470 -----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 QLDPLVVGQEHYDVARG----VQSLLQRYQELK 377
>gi|418999207|ref|ZP_13546784.1| ATP synthase F1, beta subunit [Escherichia coli DEC1A]
gi|377839255|gb|EHU04353.1| ATP synthase F1, beta subunit [Escherichia coli DEC1A]
Length = 460
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWSIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R ++ + AP +
Sbjct: 62 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWSIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|417535009|ref|ZP_12188617.1| ATP synthase subunit B [Salmonella enterica subsp. enterica serovar
Urbana str. R8-2977]
gi|353657575|gb|EHC97980.1| ATP synthase subunit B [Salmonella enterica subsp. enterica serovar
Urbana str. R8-2977]
Length = 448
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 30 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 89
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 90 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 149
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 150 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 209
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 210 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 269
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 270 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 329
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 330 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 361
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 50 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 109
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 110 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 169
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 170 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 229
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 230 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 276
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 277 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 336
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 337 VVGQEHYDTARG----VQSILQRYQELK 360
>gi|291615580|ref|YP_003518322.1| AtpD [Pantoea ananatis LMG 20103]
gi|291150610|gb|ADD75194.1| AtpD [Pantoea ananatis LMG 20103]
Length = 473
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/363 (66%), Positives = 294/363 (80%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + + + + + +KN + + +VQQQ+G +VRTIA G ++G+KR V D KP
Sbjct: 24 VEFPQDAVPQVYSALEVKNGDARLVLEVQQQLGGGVVRTIAMGTSDGLKRGLEVTDLKKP 83
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSP-----IHTLPPKFSNQIFNNNILETG 669
I PVG TLGRI+NVLG+PID KG++ + S IH P + +Q + +LETG
Sbjct: 84 IQVPVGKATLGRIMNVLGEPIDMKGDLTEEDGSAVEVSSIHRPAPSYEDQSNSQELLETG 143
Query: 670 IKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDF 729
IKVIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDF
Sbjct: 144 IKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDF 203
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
YHEM +SNV+DKV+L+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TL
Sbjct: 204 YHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTL 263
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+
Sbjct: 264 AGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPA 323
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLDST+ LSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+E
Sbjct: 324 TTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQE 383
Query: 910 LKD 912
LKD
Sbjct: 384 LKD 386
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 146/333 (43%), Gaps = 28/333 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVE-----KIAPG 230
L +G + +K ++PVG LGRI+N GE ID K ++ VE + AP
Sbjct: 70 GLKRGLEVTDLKKPIQVPVGKATLGRIMNVLGEPIDMKGDLTEEDGSAVEVSSIHRPAPS 129
Query: 231 IMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICI 289
D+ + E L TGIK ID M P KG + + G GKT ++ I N + +
Sbjct: 130 YEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSV 189
Query: 290 YVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQ 349
+ +G++ + +++ N +D +V + + TG T+ E FRD G+
Sbjct: 190 FAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 249
Query: 350 DCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKI 409
D L+ D++ ++ A ++S LL R P V Y L E + +++I
Sbjct: 250 DVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERI 296
Query: 410 FNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 297 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSR 356
Query: 470 -----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 357 QLDPLVVGQEHYDVARG----VQSLLQRYQELK 385
>gi|112791342|gb|ABI21941.1| ATP synthase beta subunit, partial [Shigella flexneri]
gi|112791346|gb|ABI21943.1| ATP synthase beta subunit, partial [Escherichia coli DSM 30083 =
JCM 1649]
Length = 421
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 17 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 348
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 37 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 217 VDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDTARG----VQSILQRYQELK 347
>gi|387886255|ref|YP_006316554.1| ATP synthase subunit beta [Francisella noatunensis subsp.
orientalis str. Toba 04]
gi|386871071|gb|AFJ43078.1| ATP synthase subunit beta [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 458
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/356 (67%), Positives = 290/356 (81%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E N K + +N+K + +VQQQIG+ +VRTIA G+++G++R +V +T PI
Sbjct: 16 VEFSRDNTPKVYDALNVKEANLVLEVQQQIGDGVVRTIAMGSSDGLRRGMVVENTNAPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID G I + IH PP + + ILETGIKV+DL+
Sbjct: 76 VPVGHGTLGRIMNVLGEPIDEAGPIQYTETRSIHQAPPAYDELALSTEILETGIKVVDLI 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTV MMELI NIA EH G SVF GVGER+REGNDFY+EMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAGVGERTREGNDFYYEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVAL+GL+IAE FR+ +DVL+FIDNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVALVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLA EMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF+HLD
Sbjct: 256 LLGRMPSAVGYQPTLAAEMGALQERITSTKTGSITSVQAVYVPADDLTDPSPATTFSHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+TIVLSRQIAELGIYPA+DPL+S S+QLDP +VG++HY+ A V+ LQ+YKELKD
Sbjct: 316 ATIVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQDHYETARAVQKVLQRYKELKD 371
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 156/387 (40%), Gaps = 31/387 (8%)
Query: 117 IIRFAYNIEYDYFDPRCLNQTLNIKFANNTVLSGQINGTTGYEEAAAQGFVAVLIDDLKN 176
+I ++E+ + + LN+K AN VL Q G A G
Sbjct: 9 VIGAVIDVEFSRDNTPKVYDALNVKEAN-LVLEVQQQIGDGVVRTIAMG-------SSDG 60
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G T +PVG LGRI+N GE ID ++ + P +
Sbjct: 61 LRRGMVVENTNAPISVPVGHGTLGRIMNVLGEPIDEAGPIQYTETRSIHQAPPAYDELAL 120
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK +D + P KG + + G GKT ++ I N K + ++ +G+
Sbjct: 121 STEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAGVGE 180
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + ++K N +D +V + + +G TI E FRD +D L+
Sbjct: 181 RTREGNDFYYEMKDSNVLDKVALVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFI 240
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P V Y + E + +++I + G
Sbjct: 241 DNIYRYTLAGTEVSALLGR------MPSAVGYQPTLAAEMGAL-------QERITSTKTG 287
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P S D I L + PA++ S SR V
Sbjct: 288 SITSVQAVYVPADDLTDPSPATTFSHLDATIVLSRQIAELGIYPAVDPLDSTSRQLDPLV 347
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y+ + ++ +L +Y+EL+
Sbjct: 348 VGQDHYETARA----VQKVLQRYKELK 370
>gi|112791348|gb|ABI21944.1| ATP synthase beta subunit, partial [Salmonella sp. ICMP 15669]
Length = 421
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 17 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 348
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 37 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 217 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDTARG----VQSILQRYQELK 347
>gi|312971976|ref|ZP_07786150.1| ATP synthase F1, beta subunit [Escherichia coli 1827-70]
gi|310334353|gb|EFQ00558.1| ATP synthase F1, beta subunit [Escherichia coli 1827-70]
Length = 441
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 17 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 348
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 37 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 217 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDTARG----VQSILQRYQELK 347
>gi|415810982|ref|ZP_11503332.1| ATP synthase F1, beta subunit [Escherichia coli LT-68]
gi|417625854|ref|ZP_12276144.1| ATP synthase F1, beta subunit [Escherichia coli STEC_H.1.8]
gi|417704851|ref|ZP_12353944.1| ATP synthase F1, beta subunit [Shigella flexneri K-218]
gi|419166670|ref|ZP_13711119.1| ATP synthase F1, beta subunit [Escherichia coli DEC6E]
gi|420344093|ref|ZP_14845553.1| ATP synthase F1, beta subunit [Shigella flexneri K-404]
gi|323173357|gb|EFZ58986.1| ATP synthase F1, beta subunit [Escherichia coli LT-68]
gi|332997375|gb|EGK16991.1| ATP synthase F1, beta subunit [Shigella flexneri K-218]
gi|345373102|gb|EGX05064.1| ATP synthase F1, beta subunit [Escherichia coli STEC_H.1.8]
gi|378006894|gb|EHV69867.1| ATP synthase F1, beta subunit [Escherichia coli DEC6E]
gi|391262151|gb|EIQ21190.1| ATP synthase F1, beta subunit [Shigella flexneri K-404]
Length = 466
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 62 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|90409883|ref|ZP_01217900.1| ATP synthase subunit B [Photobacterium profundum 3TCK]
gi|90329236|gb|EAS45493.1| ATP synthase subunit B [Photobacterium profundum 3TCK]
Length = 461
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/345 (69%), Positives = 285/345 (82%)
Query: 568 FRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRI 627
II+ N+ + +VQQQIG +VR IA G+++G++R V+TG+PI PVG+ TLGRI
Sbjct: 30 LNIIDGDNSSLVLEVQQQIGSGVVRCIAMGSSDGMRRGLTAVNTGEPITVPVGEETLGRI 89
Query: 628 LNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGL 687
+NVLG PID GEI K PIH PP + Q + +LETG+KVIDL+CPF KGGKIGL
Sbjct: 90 MNVLGHPIDECGEIGEKTSYPIHREPPSYEEQANSTELLETGVKVIDLICPFAKGGKIGL 149
Query: 688 FGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYG 747
FGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFY+EMKE+ VLDKV+++YG
Sbjct: 150 FGGAGVGKTVNMMELINNIAKAHSGLSVFTGVGERTREGNDFYYEMKEAGVLDKVAMVYG 209
Query: 748 QMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY 807
QMNEP GNRLRVALTGL+IAE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGY
Sbjct: 210 QMNEPPGNRLRVALTGLTIAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY 269
Query: 808 QPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAE 867
QPTLAEEMG LQERI+ST G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA
Sbjct: 270 QPTLAEEMGVLQERITSTHKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAA 329
Query: 868 LGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LG+YPAIDPL+S S+QLDP +VG EHY+VA V+ LQ+YKELKD
Sbjct: 330 LGLYPAIDPLDSTSRQLDPLVVGTEHYEVARGVQTVLQRYKELKD 374
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 165/388 (42%), Gaps = 30/388 (7%)
Query: 117 IIRFAYNIEYDYFDPRCLNQTLNIKFANNTVLSGQINGTTGYEEAAAQGFV-AVLIDDLK 175
+I ++E+D + LNI +N+ L ++ G G V + +
Sbjct: 9 VIGAVVDVEFDQDSVPRVYDALNIIDGDNSSLVLEVQQQIG------SGVVRCIAMGSSD 62
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
+ +G T + +PVG E LGRI+N G ID + K + + P ++
Sbjct: 63 GMRRGLTAVNTGEPITVPVGEETLGRIMNVLGHPIDECGEIGEKTSYPIHREPPSYEEQA 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TG+K ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 123 NSTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + TG TI E FRD G+D L+
Sbjct: 183 ERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVALTGLTIAERFRDEGRDVLLF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I + +
Sbjct: 243 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTHK 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ PAI+ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPL 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y++ + ++ +L +Y+EL+
Sbjct: 350 VVGTEHYEVARG----VQTVLQRYKELK 373
>gi|120556779|ref|YP_961130.1| F0F1 ATP synthase subunit beta [Marinobacter aquaeolei VT8]
gi|387816212|ref|YP_005431707.1| F1 sector of membrane-bound ATP synthase subunit beta [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|166201716|sp|A1U7H4.1|ATPB_MARAV RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|120326628|gb|ABM20943.1| ATP synthase F1 subcomplex beta subunit [Marinobacter aquaeolei
VT8]
gi|381341237|emb|CCG97284.1| F1 sector of membrane-bound ATP synthase, beta subunit
[Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 464
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 287/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G+T G+KR +TGKPI PVG TLGRI++VLG PID +G+
Sbjct: 40 EVQQQLGDGIVRTIAMGSTEGLKRGLKAENTGKPISVPVGTQTLGRIMDVLGRPIDEQGD 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P +++Q + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWAIHRKAPGYADQAASADLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFY+EMKESNVLDKV+++YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKEHSGLSVFAGVGERTREGNDFYYEMKESNVLDKVAMVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQE
Sbjct: 220 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGQLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF+HLD+T+VLSR IA GIYPAIDPL+S
Sbjct: 280 RITSTKTGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRDIASKGIYPAIDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++GE+HY VA V+ LQ+YKELKD
Sbjct: 340 SRQLDPLVIGEQHYNVARGVQNVLQRYKELKD 371
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 150/329 (45%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G K T K +PVG + LGRI++ G ID + + R + + APG D+
Sbjct: 59 EGLKRGLKAENTGKPISVPVGTQTLGRIMDVLGRPIDEQGDIGEEERWAIHRKAPGYADQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ + L TGIK ID + P KG + + G GKT ++ I N K + + ++ +
Sbjct: 119 AASADLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + ++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 GERTREGNDFYYEMKESNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E ++ +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGQL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P S D + L ++ + PAI+ S SR
Sbjct: 286 TGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRDIASKGIYPAIDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 346 LVIGEQHYNVARG----VQNVLQRYKELK 370
>gi|77361904|ref|YP_341479.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas haloplanktis
TAC125]
gi|118573724|sp|Q3IK50.1|ATPB_PSEHT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|76876815|emb|CAI88037.1| membrane-bound ATP synthase, F1 sector, beta-subunit
[Pseudoalteromonas haloplanktis TAC125]
Length = 461
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G T+G++R V++TG+ I PVG TLGRI+NVLG+PID G
Sbjct: 43 EVQQQLGGGVVRTIAMGTTDGLRRGASVMNTGESIQVPVGKATLGRIMNVLGEPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + + IH P + Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEDRMSIHRAAPTYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RIASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSS 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPQVIGQEHYDTARGVQTVLQRYKELKD 374
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T + ++PVG LGRI+N GE ID ++R ++ + AP ++
Sbjct: 63 GLRRGASVMNTGESIQVPVGKATLGRIMNVLGEPIDEAGPIGEEDRMSIHRAAPTYEEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 123 SSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 183 ERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 243 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERIASTKT 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDPQ 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 350 VIGQEHYDTARG----VQTVLQRYKELK 373
>gi|378765035|ref|YP_005193494.1| ATP synthase F1 subunit beta [Pantoea ananatis LMG 5342]
gi|386017768|ref|YP_005936068.1| ATP synthase beta chain AtpD [Pantoea ananatis AJ13355]
gi|386077299|ref|YP_005990824.1| ATP synthase beta chain AtpD [Pantoea ananatis PA13]
gi|327395850|dbj|BAK13272.1| ATP synthase beta chain AtpD [Pantoea ananatis AJ13355]
gi|354986480|gb|AER30604.1| ATP synthase beta chain AtpD [Pantoea ananatis PA13]
gi|365184507|emb|CCF07457.1| ATP synthase F1 subunit beta [Pantoea ananatis LMG 5342]
Length = 465
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/363 (66%), Positives = 294/363 (80%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + + + + + +KN + + +VQQQ+G +VRTIA G ++G+KR V D KP
Sbjct: 16 VEFPQDAVPQVYSALEVKNGDARLVLEVQQQLGGGVVRTIAMGTSDGLKRGLEVTDLKKP 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSP-----IHTLPPKFSNQIFNNNILETG 669
I PVG TLGRI+NVLG+PID KG++ + S IH P + +Q + +LETG
Sbjct: 76 IQVPVGKATLGRIMNVLGEPIDMKGDLTEEDGSAVEVSSIHRPAPSYEDQSNSQELLETG 135
Query: 670 IKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDF 729
IKVIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDF
Sbjct: 136 IKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDF 195
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
YHEM +SNV+DKV+L+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TL
Sbjct: 196 YHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTL 255
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+
Sbjct: 256 AGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPA 315
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLDST+ LSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+E
Sbjct: 316 TTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQE 375
Query: 910 LKD 912
LKD
Sbjct: 376 LKD 378
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 146/333 (43%), Gaps = 28/333 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVE-----KIAPG 230
L +G + +K ++PVG LGRI+N GE ID K ++ VE + AP
Sbjct: 62 GLKRGLEVTDLKKPIQVPVGKATLGRIMNVLGEPIDMKGDLTEEDGSAVEVSSIHRPAPS 121
Query: 231 IMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICI 289
D+ + E L TGIK ID M P KG + + G GKT ++ I N + +
Sbjct: 122 YEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSV 181
Query: 290 YVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQ 349
+ +G++ + +++ N +D +V + + TG T+ E FRD G+
Sbjct: 182 FAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 241
Query: 350 DCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKI 409
D L+ D++ ++ A ++S LL R P V Y L E + +++I
Sbjct: 242 DVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERI 288
Query: 410 FNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSR 348
Query: 470 -----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 QLDPLVVGQEHYDVARG----VQSLLQRYQELK 377
>gi|261346707|ref|ZP_05974351.1| ATP synthase F1, beta subunit [Providencia rustigianii DSM 4541]
gi|282565107|gb|EFB70642.1| ATP synthase F1, beta subunit [Providencia rustigianii DSM 4541]
Length = 460
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/345 (69%), Positives = 287/345 (83%), Gaps = 1/345 (0%)
Query: 568 FRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRI 627
+IN K + + +VQQQ+G +VR IA G ++G+ R VV+ PI PVG TLGRI
Sbjct: 30 LEVINGKEKLVL-EVQQQLGGGVVRCIAMGTSDGLSRGLEVVNLEHPIEVPVGKATLGRI 88
Query: 628 LNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGL 687
+NVLGDPID KG+I +++ IH P + + +LETGIKV+DL+CPF KGGK+GL
Sbjct: 89 MNVLGDPIDMKGDIGEEERWSIHRSAPSYEELANSTELLETGIKVMDLICPFAKGGKVGL 148
Query: 688 FGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYG 747
FGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YG
Sbjct: 149 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 208
Query: 748 QMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY 807
QMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGY
Sbjct: 209 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGY 268
Query: 808 QPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAE 867
QPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA
Sbjct: 269 QPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAS 328
Query: 868 LGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 329 LGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKD 373
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G + E E+PVG LGRI+N G+ ID K + R ++ + AP +
Sbjct: 62 GLSRGLEVVNLEHPIEVPVGKATLGRIMNVLGDPIDMKGDIGEEERWSIHRSAPSYEELA 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSTELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|359299438|ref|ZP_09185277.1| F0F1 ATP synthase subunit beta [Haemophilus [parainfluenzae] CCUG
13788]
Length = 457
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 293/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGLVRCIALGTSDGLKRGLKVENTHNPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID KG I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEKGPIGEEERWDIHRAAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKD 370
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID K + R + + AP ++
Sbjct: 59 GLKRGLKVENTHNPIQVPVGTKTLGRIMNVLGEPIDEKGPIGEEERWDIHRAAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G L +Y+EL+
Sbjct: 346 VVGEEHYNVARGVQG----TLQRYKELK 369
>gi|402304505|ref|ZP_10823573.1| ATP synthase F1, beta subunit [Haemophilus sputorum HK 2154]
gi|400377588|gb|EJP30462.1| ATP synthase F1, beta subunit [Haemophilus sputorum HK 2154]
Length = 457
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 293/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGLVRCIALGTSDGLKRGLKVENTHNPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID KG I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEKGPIGEEERWDIHRAAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKD 370
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID K + R + + AP ++
Sbjct: 59 GLKRGLKVENTHNPIQVPVGTKTLGRIMNVLGEPIDEKGPIGEEERWDIHRAAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G L +Y+EL+
Sbjct: 346 VVGEEHYNVARGVQG----TLQRYKELK 369
>gi|421569822|ref|ZP_16015522.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|402526546|gb|EJW33820.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
Length = 390
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/334 (71%), Positives = 283/334 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKDTS 914
S+QLDP +VG+EHY A V+ LQ+Y+ELK +S
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKASS 375
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 151/345 (43%), Gaps = 23/345 (6%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G E E+PVG LGRI+N GE +D K + + R + + AP + +
Sbjct: 63 LRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSN 122
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK ID M P KG + + G GKT ++ I N + ++ +G+
Sbjct: 123 SQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGE 182
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 183 RTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFV 242
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P V Y + + + + +++I + G
Sbjct: 243 DNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKTG 289
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L + + PA++ S SR V
Sbjct: 290 SITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLV 349
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLY 515
G Y + ++ +L +Y+EL++ S S ++ + K +
Sbjct: 350 VGQEHYDTARG----VQSILQRYQELKASSPSSVWMNCLKKINWW 390
>gi|395234193|ref|ZP_10412422.1| F0F1 ATP synthase subunit beta [Enterobacter sp. Ag1]
gi|394731333|gb|EJF31130.1| F0F1 ATP synthase subunit beta [Enterobacter sp. Ag1]
Length = 460
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/358 (67%), Positives = 291/358 (81%), Gaps = 2/358 (0%)
Query: 557 IELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + + + + + ++NN + +VQQQ+G IVRTIA G+++G++R V D P
Sbjct: 16 VEFPQDGVPRVYDALEVQNNNEKLVLEVQQQLGGGIVRTIAMGSSDGLRRGLQVNDLEHP 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVID 674
I PVG TLGRI+NVLG PID KG+I + + IH P + + +LETGIKVID
Sbjct: 76 IEVPVGKATLGRIMNVLGQPIDMKGDIGEEDRWAIHRAAPSYEELSSSQELLETGIKVID 135
Query: 675 LLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMK 734
L+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM
Sbjct: 136 LICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMT 195
Query: 735 ESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEV 794
+SNVLDKV+L+YGQMNEP GNRLRVALTGL+IAE+FR+ G+DVLLF+DNIYR+TLAGTEV
Sbjct: 196 DSNVLDKVALVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLLFVDNIYRYTLAGTEV 255
Query: 795 SAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTH 854
SA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF H
Sbjct: 256 SALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315
Query: 855 LDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LDST+ LSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 316 LDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + E E+PVG LGRI+N G+ ID K ++R + + AP +
Sbjct: 62 GLRRGLQVNDLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEDRWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG TI E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVALVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|386388553|ref|ZP_10073415.1| ATP synthase F1, beta subunit [Haemophilus paraphrohaemolyticus
HK411]
gi|385697781|gb|EIG28190.1| ATP synthase F1, beta subunit [Haemophilus paraphrohaemolyticus
HK411]
Length = 457
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 293/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGLVRCIALGTSDGLKRGLKVENTHNPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID KG I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEKGPIGEEERWDIHRAAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKD 370
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID K + R + + AP ++
Sbjct: 59 GLKRGLKVENTHNPIQVPVGTKTLGRIMNVLGEPIDEKGPIGEEERWDIHRAAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G L +Y+EL+
Sbjct: 346 VVGEEHYNVARGVQG----TLQRYKELK 369
>gi|34500004|gb|AAQ73584.1| ATP synthase beta subunit [Actinobacillus lignieresii]
Length = 444
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/356 (68%), Positives = 292/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ ++ +VQQQ+G +VR IA G ++G+KR V +TG PI
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTF-EVQQQLGGGLVRCIALGTSDGLKRGLKVENTGNPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID KG I + + IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEKGPIGEEARWDIHRXAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRIPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKD 370
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID K + R + + AP ++
Sbjct: 59 GLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEKGPIGEEARWDIHRXAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRIPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G L +Y+EL+
Sbjct: 346 VVGEEHYNVARGVQG----TLQRYKELK 369
>gi|423122855|ref|ZP_17110539.1| ATP synthase subunit beta [Klebsiella oxytoca 10-5246]
gi|376392136|gb|EHT04803.1| ATP synthase subunit beta [Klebsiella oxytoca 10-5246]
Length = 460
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/338 (70%), Positives = 282/338 (83%)
Query: 575 NNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDP 634
N + +VQQQ+G IVR IA G+++G++R V D PI PVG TLGRI+NVLG P
Sbjct: 36 NESLVLEVQQQLGGGIVRAIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQP 95
Query: 635 IDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVG 694
ID KG+I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVG
Sbjct: 96 IDMKGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVG 155
Query: 695 KTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSG 754
KTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP G
Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPG 215
Query: 755 NRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
NRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 216 NRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 275
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+
Sbjct: 276 MGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAV 335
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 336 DPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 373
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 146/336 (43%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L +G + E E+PVG LGRI+N G+ ID K + R + +
Sbjct: 54 AIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRA 113
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP + S E L TGIK ID M P KG + + G GKT ++ I N +
Sbjct: 114 APSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 173
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++ N +D +V + + TG T+ E FRD
Sbjct: 174 YSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRD 233
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L+ D++ ++ A ++S LL R P V Y + + + + +
Sbjct: 234 EGRDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQ 280
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L + + PA++ S
Sbjct: 281 ERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDS 340
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y + ++ +L +Y+EL+
Sbjct: 341 TSRQLDPLVVGQEHYDTARG----VQSLLQRYQELK 372
>gi|365919947|ref|ZP_09444305.1| ATP synthase F1, alpha subunit [Cardiobacterium valvarum F0432]
gi|364578696|gb|EHM55892.1| ATP synthase F1, alpha subunit [Cardiobacterium valvarum F0432]
Length = 513
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 236/419 (56%), Positives = 322/419 (76%), Gaps = 5/419 (1%)
Query: 169 VLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIA 228
V++ + +L++G K CT +I E+PVG ELLGR+VN+ G+ ID K +EKIA
Sbjct: 74 VILGEYDHLSEGDKVTCTGRILEVPVGRELLGRVVNALGQPIDGKGDIKTLATSPIEKIA 133
Query: 229 PGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC 288
PG+++R+SV++PL TG+KSIDSM+PIG+GQRELIIGDRQTGKT IA+D IINQ++ V C
Sbjct: 134 PGVIERQSVDQPLQTGLKSIDSMVPIGRGQRELIIGDRQTGKTAIAVDAIINQRDTGVKC 193
Query: 289 IYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLG 348
IYV IGQK SS+ V+ KL+ ++ + +T++VAATA+DSAA QYI+PY GC +GEYFRD G
Sbjct: 194 IYVAIGQKASSIAAVVRKLEEHDALKHTIIVAATASDSAAMQYIAPYAGCAMGEYFRDRG 253
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK-- 406
+D LI+YDDLTK AWAYRQ+SLLL+RPPGREA+PGDVFYLHSRLLER+++IN +E+
Sbjct: 254 EDALIVYDDLTKQAWAYRQVSLLLKRPPGREAYPGDVFYLHSRLLERAARINADEVERLT 313
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
K G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN GLS
Sbjct: 314 KGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGLS 373
Query: 467 VSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMKQ 526
VSRVGGAAQ K++KKL G +R+ LAQYREL +F++F+SDLD T+ QL G++++ LMKQ
Sbjct: 374 VSRVGGAAQTKVIKKLGGGVRLALAQYRELAAFAQFASDLDDATRKQLERGQRVTELMKQ 433
Query: 527 KPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIINLKNNISINKVQQQ 585
K S+ E+ + L +N F IP+++I+ +E +++Y ++ + + ++KV ++
Sbjct: 434 KQFSPMSVAEMSVSLFAAENGFLDDIPVEKIQAYEQALLQY---MHSDHQVLLDKVNER 489
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 153/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G + + V TG+ + PVG LGR++N LG PID KG+I + SPI
Sbjct: 71 VGVVILGEYDHLSEGDKVTCTGRILEVPVGRELLGRVVNALGQPIDGKGDIKTLATSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TG+K ID + P +G + + G GKT ++ I N
Sbjct: 131 KIAPGVIERQSVDQPLQTGLKSIDSMVPIGRGQRELIIGDRQTGKTAIAVDAIINQRDTG 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ +++E + L ++ ++ + + G ++ E F
Sbjct: 191 VKC-IYVAIGQKASSIAAVVRKLEEHDALKHTIIVAATASDSAAMQYIAPYAGCAMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTL---------------AEEM 815
R+ G+D L+ D++ + A +VS +L R P Y + A+E+
Sbjct: 250 RDRGEDALIVYDDLTKQAWAYRQVSLLLKRPPGREAYPGDVFYLHSRLLERAARINADEV 309
Query: 816 GKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
+L + K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 310 ERLTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G KV + V+ L +Y+EL
Sbjct: 370 AGLSVSR-----VGGAAQTKVIKKLGGGVRLALAQYREL 403
>gi|317494643|ref|ZP_07953055.1| ATP synthase F1 [Enterobacteriaceae bacterium 9_2_54FAA]
gi|365836849|ref|ZP_09378233.1| ATP synthase F1, beta subunit [Hafnia alvei ATCC 51873]
gi|316917245|gb|EFV38592.1| ATP synthase F1 [Enterobacteriaceae bacterium 9_2_54FAA]
gi|364563046|gb|EHM40866.1| ATP synthase F1, beta subunit [Hafnia alvei ATCC 51873]
Length = 459
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/360 (67%), Positives = 292/360 (81%), Gaps = 1/360 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS-INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTG 612
+ +E + + K + + +K + +VQQQ+G +VR IA G ++G++R VVD
Sbjct: 13 VVDVEFPQDAVPKVYNALEVKGGAKLVLEVQQQLGGGVVRCIAMGTSDGLRRGLDVVDLE 72
Query: 613 KPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKV 672
PI PVG TLGRI+NVLG+PID KG+I + + IH P + + +LETGIKV
Sbjct: 73 HPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEDRWAIHREAPSYEELSNSQELLETGIKV 132
Query: 673 IDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHE 732
+DL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHE
Sbjct: 133 MDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHE 192
Query: 733 MKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGT 792
M +SNVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGT
Sbjct: 193 MTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGT 252
Query: 793 EVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTF 852
EVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF
Sbjct: 253 EVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTF 312
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 313 AHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKD 372
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE ID K ++R + + AP +
Sbjct: 61 GLRRGLDVVDLEHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEDRWAIHREAPSYEELS 120
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 121 NSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 180
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 181 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 240
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 241 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 287
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 288 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 347
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 348 VVGQEHYDVARG----VQSILQRYQELK 371
>gi|410623984|ref|ZP_11334792.1| F-type H+-transporting ATPase subunit beta [Glaciecola pallidula
DSM 14239 = ACAM 615]
gi|410156324|dbj|GAC30166.1| F-type H+-transporting ATPase subunit beta [Glaciecola pallidula
DSM 14239 = ACAM 615]
Length = 460
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G+T+G++RN V ++G+ I PVG TLGRI++VLG+PID G
Sbjct: 43 EVQQQLGGGVVRTIAMGSTDGLRRNLAVENSGEGIQVPVGIATLGRIMDVLGNPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERMSIHREAPSYEEQSISIELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY VA V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGQEHYDVARGVQTVLQRYKELKD 374
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 136/313 (43%), Gaps = 23/313 (7%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDS 250
++PVG LGRI++ G ID + R ++ + AP ++ E L TGIK ID
Sbjct: 78 QVPVGIATLGRIMDVLGNPIDEAGPIGEEERMSIHREAPSYEEQSISIELLETGIKVIDL 137
Query: 251 MIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKY 309
+ P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 138 ICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMNE 197
Query: 310 YNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQIS 369
N +D +V + + TG T+ E FRD G+D L D++ ++ A ++S
Sbjct: 198 SNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVS 257
Query: 370 LLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGD 429
LL R P + L E + +++I + G++T+ + D
Sbjct: 258 ALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSIQAVYVPADD 304
Query: 430 VTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSG 484
+T P + D + L ++ + PA++ S SR V G Y + +
Sbjct: 305 LTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDVARG--- 361
Query: 485 DIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 362 -VQTVLQRYKELK 373
>gi|205354552|ref|YP_002228353.1| ATP synthase F0F1 subunit beta [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|375125437|ref|ZP_09770601.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|445131312|ref|ZP_21381711.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|226740669|sp|B5RFW3.1|ATPB_SALG2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|205274333|emb|CAR39357.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326629687|gb|EGE36030.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|444850516|gb|ELX75615.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
Length = 460
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G+ R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLSRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 62 GLSRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|381403404|ref|ZP_09928088.1| F0F1 ATP synthase subunit beta [Pantoea sp. Sc1]
gi|380736603|gb|EIB97666.1| F0F1 ATP synthase subunit beta [Pantoea sp. Sc1]
Length = 465
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/337 (71%), Positives = 282/337 (83%), Gaps = 5/337 (1%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G ++G+KR V D KPI PVG TLGRI+NVLG+PID KGE
Sbjct: 42 EVQQQLGGGVVRTIAMGTSDGLKRGLNVNDLQKPIQVPVGKATLGRIMNVLGEPIDMKGE 101
Query: 641 INSKKKSP-----IHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGK 695
+ + S IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGK
Sbjct: 102 LKEEDGSAVEIASIHRAAPSYEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGK 161
Query: 696 TVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGN 755
TVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM +SNV+DKV+L+YGQMNEP GN
Sbjct: 162 TVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGN 221
Query: 756 RLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEM 815
RLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEM
Sbjct: 222 RLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEM 281
Query: 816 GKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
G LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLDST+ LSRQIA LGIYPA+D
Sbjct: 282 GVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVD 341
Query: 876 PLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
PL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 342 PLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQELKD 378
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 146/333 (43%), Gaps = 28/333 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVE-----KIAPG 230
L +G +K ++PVG LGRI+N GE ID K + ++ VE + AP
Sbjct: 62 GLKRGLNVNDLQKPIQVPVGKATLGRIMNVLGEPIDMKGELKEEDGSAVEIASIHRAAPS 121
Query: 231 IMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICI 289
D+ + E L TGIK ID M P KG + + G GKT ++ I N + +
Sbjct: 122 YEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSV 181
Query: 290 YVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQ 349
+ +G++ + +++ N +D +V + + TG T+ E FRD G+
Sbjct: 182 FAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 241
Query: 350 DCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKI 409
D L+ D++ ++ A ++S LL R P V Y L E + +++I
Sbjct: 242 DVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERI 288
Query: 410 FNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSR 348
Query: 470 -----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 QLDPLVVGQEHYDVARG----VQSLLQRYQELK 377
>gi|387130850|ref|YP_006293740.1| ATP synthase subunit beta [Methylophaga sp. JAM7]
gi|386272139|gb|AFJ03053.1| ATP synthase beta chain [Methylophaga sp. JAM7]
Length = 458
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VR IA G T+G+KR V +TGK I PVG TLGRI++VLG+PID KG+
Sbjct: 40 EVQQQLGDGVVRAIAMGTTDGLKRGLAVNNTGKAISVPVGKQTLGRIMDVLGNPIDEKGD 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P F +N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWGIHRKAPTFDELAASNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEFFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IAELGIYPAIDPL+S
Sbjct: 280 RITSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRSIAELGIYPAIDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG +HY+VA V+ LQ+YKELKD
Sbjct: 340 SRQLDPLVVGNDHYEVARGVQGTLQRYKELKD 371
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 155/360 (43%), Gaps = 24/360 (6%)
Query: 145 NTVLSGQINGTTGYEEAAAQGFV-AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIV 203
+ +L ++ T ++ G V A+ + L +G T K +PVG + LGRI+
Sbjct: 28 DALLVDEVGLTLEVQQQLGDGVVRAIAMGTTDGLKRGLAVNNTGKAISVPVGKQTLGRIM 87
Query: 204 NSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELII 263
+ G ID K + R + + AP + + NE L TGIK ID + P KG + +
Sbjct: 88 DVLGNPIDEKGDIGEEERWGIHRKAPTFDELAASNELLETGIKVIDLVCPFAKGGKVGLF 147
Query: 264 GDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAAT 322
G GKT ++ I N + ++ +G++ + +++ N +D +V
Sbjct: 148 GGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQ 207
Query: 323 AADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFP 382
+ + TG T+ E+FRD G+D L D++ ++ A ++S LL R P +
Sbjct: 208 MNEPPGNRLRVALTGLTMAEFFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGY- 266
Query: 383 GDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISIT 442
L E + +++I + G++T+ + D+T P +
Sbjct: 267 ------QPTLAEEMGVL------QERITSTKVGSITSIQAVYVPADDLTDPSPATTFAHL 314
Query: 443 DGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
D + L ++ PAI+ S SR V G Y++ + + G L +Y+EL+
Sbjct: 315 DATVVLSRSIAELGIYPAIDPLDSTSRQLDPLVVGNDHYEVARGVQG----TLQRYKELK 370
>gi|112791404|gb|ABI21972.1| ATP synthase beta subunit, partial [Erwinia amylovora]
Length = 421
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/347 (69%), Positives = 290/347 (83%), Gaps = 2/347 (0%)
Query: 568 FRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLG 625
+ + +KN + + +VQQQ+G +VRTIA G+++G+KR VD PI PVG TLG
Sbjct: 2 YSALEVKNGDARLVLEVQQQLGGGVVRTIAMGSSDGLKRGLEAVDLQHPIEVPVGTATLG 61
Query: 626 RILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKI 685
RI+NVLG+PID KG+I +++ IH P + +Q + ++LETGIKVIDL+CPF KGGK+
Sbjct: 62 RIMNVLGEPIDMKGDIGEEERWAIHRSAPSYEDQSNSQDLLETGIKVIDLMCPFAKGGKV 121
Query: 686 GLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLI 745
GLFGGAGVGKTVNMMELIRNIA E G SVF GVGER+REGNDFYHEM +SNV+DKVSL+
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAAEPSGFSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181
Query: 746 YGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAV 805
YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAV
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAV 241
Query: 806 GYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQI 865
GYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQI
Sbjct: 242 GYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 301
Query: 866 AELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
A LGIYPA+DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 348
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + E+PVG LGRI+N GE ID K + R + + AP D+
Sbjct: 37 GLKRGLEAVDLQHPIEVPVGTATLGRIMNVLGEPIDMKGDIGEEERWAIHRSAPSYEDQS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ + L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NSQDLLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEPSGFSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 217 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDTARG----VQSLLQRYQELK 347
>gi|336247926|ref|YP_004591636.1| F0F1 ATP synthase subunit beta [Enterobacter aerogenes KCTC 2190]
gi|444353970|ref|YP_007390114.1| ATP synthase beta chain (EC 3.6.3.14) [Enterobacter aerogenes
EA1509E]
gi|334733982|gb|AEG96357.1| F0F1 ATP synthase subunit beta [Enterobacter aerogenes KCTC 2190]
gi|443904800|emb|CCG32574.1| ATP synthase beta chain (EC 3.6.3.14) [Enterobacter aerogenes
EA1509E]
Length = 460
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/338 (70%), Positives = 282/338 (83%)
Query: 575 NNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDP 634
N + +VQQQ+G +VR IA G+++G++R V D PI PVG TLGRI+NVLG P
Sbjct: 36 NESLVLEVQQQLGGGVVRAIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQP 95
Query: 635 IDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVG 694
ID KG+I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVG
Sbjct: 96 IDMKGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVG 155
Query: 695 KTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSG 754
KTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP G
Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPG 215
Query: 755 NRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
NRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 216 NRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 275
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+
Sbjct: 276 MGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAV 335
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 336 DPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 373
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 146/336 (43%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L +G + E E+PVG LGRI+N G+ ID K + R + +
Sbjct: 54 AIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRA 113
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP + S E L TGIK ID M P KG + + G GKT ++ I N +
Sbjct: 114 APSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 173
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++ N +D +V + + TG T+ E FRD
Sbjct: 174 YSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRD 233
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L+ D++ ++ A ++S LL R P V Y + + + + +
Sbjct: 234 EGRDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQ 280
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L + + PA++ S
Sbjct: 281 ERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDS 340
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y + ++ +L +Y+EL+
Sbjct: 341 TSRQLDPLVVGQEHYDTARG----VQSLLQRYQELK 372
>gi|118498208|ref|YP_899258.1| F0F1 ATP synthase subunit beta [Francisella novicida U112]
gi|194324392|ref|ZP_03058165.1| ATP synthase F1, beta subunit [Francisella novicida FTE]
gi|208780235|ref|ZP_03247577.1| ATP synthase F1, beta subunit [Francisella novicida FTG]
gi|254373552|ref|ZP_04989039.1| ATP synthase subunit B [Francisella tularensis subsp. novicida
GA99-3549]
gi|385793618|ref|YP_005826594.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|166201705|sp|A0Q8D9.1|ATPB_FRATN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|118424114|gb|ABK90504.1| ATP synthase, F1 sector, subunit beta [Francisella novicida U112]
gi|151571277|gb|EDN36931.1| ATP synthase subunit B [Francisella novicida GA99-3549]
gi|194321457|gb|EDX18942.1| ATP synthase F1, beta subunit [Francisella tularensis subsp.
novicida FTE]
gi|208743884|gb|EDZ90186.1| ATP synthase F1, beta subunit [Francisella novicida FTG]
gi|332678943|gb|AEE88072.1| ATP synthase beta chain [Francisella cf. novicida Fx1]
Length = 458
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/356 (67%), Positives = 289/356 (81%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E N K + +N+ + +VQQQIG+ +VRTIA G+++G++R V +T PI
Sbjct: 16 VEFARDNTPKVYDALNVVEAGLVLEVQQQIGDGVVRTIAMGSSDGLRRGMEVKNTNAPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID G I +K IH PP + + ILETGIKV+DL+
Sbjct: 76 VPVGHGTLGRIMNVLGEPIDEAGPIEYTEKRSIHQAPPAYDELALSTEILETGIKVVDLI 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTV MMELI NIA EH G SVF GVGER+REGNDFY+EMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAGVGERTREGNDFYYEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVAL+GL+IAE FR+ +DVL+FIDNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLA EMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF+HLD
Sbjct: 256 LLGRMPSAVGYQPTLAAEMGALQERITSTKTGSITSVQAVYVPADDLTDPSPATTFSHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+TIVLSRQIAELGIYPA+DPL+S S+QLDP +VG+EHY+ A V+ LQ+YKELKD
Sbjct: 316 ATIVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQEHYETARAVQKVLQRYKELKD 371
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 135/327 (41%), Gaps = 23/327 (7%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G + T +PVG LGRI+N GE ID + ++ + P +
Sbjct: 61 LRRGMEVKNTNAPISVPVGHGTLGRIMNVLGEPIDEAGPIEYTEKRSIHQAPPAYDELAL 120
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK +D + P KG + + G GKT ++ I N K + ++ +G+
Sbjct: 121 STEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAGVGE 180
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + ++K N +D +V + + +G TI E FRD +D L+
Sbjct: 181 RTREGNDFYYEMKDSNVLDKVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFI 240
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + + L ER I + G
Sbjct: 241 DNIYRYTLAGTEVSALLGRMPSAVGYQPTLAAEMGALQER-------------ITSTKTG 287
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P S D I L + PA++ S SR V
Sbjct: 288 SITSVQAVYVPADDLTDPSPATTFSHLDATIVLSRQIAELGIYPAVDPLDSTSRQLDPLV 347
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y+ + ++ +L +Y+EL+
Sbjct: 348 VGQEHYETARA----VQKVLQRYKELK 370
>gi|304398017|ref|ZP_07379892.1| ATP synthase F1, beta subunit [Pantoea sp. aB]
gi|308188719|ref|YP_003932850.1| membrane-bound ATP synthase, F1 sector subunit beta [Pantoea vagans
C9-1]
gi|304354303|gb|EFM18675.1| ATP synthase F1, beta subunit [Pantoea sp. aB]
gi|308059229|gb|ADO11401.1| membrane-bound ATP synthase, F1 sector, beta- subunit [Pantoea
vagans C9-1]
Length = 465
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/337 (71%), Positives = 282/337 (83%), Gaps = 5/337 (1%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G ++G+KR V D KPI PVG TLGRI+NVLG+PID KGE
Sbjct: 42 EVQQQLGGGVVRTIAMGTSDGLKRGLNVNDLQKPIQVPVGKATLGRIMNVLGEPIDMKGE 101
Query: 641 INSKKKSP-----IHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGK 695
+ + S IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGK
Sbjct: 102 LKEEDGSAVEIASIHRAAPSYEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGK 161
Query: 696 TVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGN 755
TVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM +SNV+DKV+L+YGQMNEP GN
Sbjct: 162 TVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGN 221
Query: 756 RLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEM 815
RLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEM
Sbjct: 222 RLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEM 281
Query: 816 GKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
G LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLDST+ LSRQIA LGIYPA+D
Sbjct: 282 GVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVD 341
Query: 876 PLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
PL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 342 PLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQELKD 378
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 146/333 (43%), Gaps = 28/333 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVE-----KIAPG 230
L +G +K ++PVG LGRI+N GE ID K + ++ VE + AP
Sbjct: 62 GLKRGLNVNDLQKPIQVPVGKATLGRIMNVLGEPIDMKGELKEEDGSAVEIASIHRAAPS 121
Query: 231 IMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICI 289
D+ + E L TGIK ID M P KG + + G GKT ++ I N + +
Sbjct: 122 YEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSV 181
Query: 290 YVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQ 349
+ +G++ + +++ N +D +V + + TG T+ E FRD G+
Sbjct: 182 FAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 241
Query: 350 DCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKI 409
D L+ D++ ++ A ++S LL R P V Y L E + +++I
Sbjct: 242 DVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERI 288
Query: 410 FNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSR 348
Query: 470 -----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 QLDPLVVGQEHYDVARG----VQSLLQRYQELK 377
>gi|112791398|gb|ABI21969.1| ATP synthase beta subunit, partial [Pantoea agglomerans]
Length = 425
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/337 (71%), Positives = 282/337 (83%), Gaps = 5/337 (1%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G ++G+KR V D KPI PVG TLGRI+NVLG+PID KGE
Sbjct: 16 EVQQQLGGGVVRTIAMGTSDGLKRGLSVNDLQKPIQVPVGKATLGRIMNVLGEPIDMKGE 75
Query: 641 INSKKKSP-----IHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGK 695
+ + S IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGK
Sbjct: 76 LKEEDGSAVEIASIHRAAPSYEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGK 135
Query: 696 TVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGN 755
TVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM +SNV+DKV+L+YGQMNEP GN
Sbjct: 136 TVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGN 195
Query: 756 RLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEM 815
RLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEM
Sbjct: 196 RLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEM 255
Query: 816 GKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
G LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLDST+ LSRQIA LGIYPA+D
Sbjct: 256 GVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVD 315
Query: 876 PLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
PL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 316 PLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQELKD 352
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 145/333 (43%), Gaps = 28/333 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVE-----KIAPG 230
L +G +K ++PVG LGRI+N GE ID K + ++ VE + AP
Sbjct: 36 GLKRGLSVNDLQKPIQVPVGKATLGRIMNVLGEPIDMKGELKEEDGSAVEIASIHRAAPS 95
Query: 231 IMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICI 289
D+ + E L TGIK ID M P KG + + G GKT ++ I N + +
Sbjct: 96 YEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSV 155
Query: 290 YVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQ 349
+ +G++ + +++ N +D +V + + TG T+ E FRD G+
Sbjct: 156 FAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 215
Query: 350 DCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKI 409
D L+ D++ ++ A ++S LL R P + L E + +++I
Sbjct: 216 DVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERI 262
Query: 410 FNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 263 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSR 322
Query: 470 -----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 323 QLDPLVVGQEHYDVARG----VQSLLQRYQELK 351
>gi|112791376|gb|ABI21958.1| ATP synthase beta subunit, partial [Pectobacterium atrosepticum]
gi|112791378|gb|ABI21959.1| ATP synthase beta subunit, partial [Pectobacterium betavasculorum]
Length = 421
Score = 511 bits (1315), Expect = e-141, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVR IA G+++G++R V + G PI PVG TLGRI+NVLGDPID KG+
Sbjct: 17 EVQQQLGGGIVRCIAMGSSDGLRRGLNVNNLGHPIEVPVGKATLGRIMNVLGDPIDMKGD 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRSAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 138/313 (44%), Gaps = 23/313 (7%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDS 250
E+PVG LGRI+N G+ ID K + R + + AP + + E L TGIK ID
Sbjct: 52 EVPVGKATLGRIMNVLGDPIDMKGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVIDL 111
Query: 251 MIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKY 309
M P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 112 MCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTD 171
Query: 310 YNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQIS 369
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++S
Sbjct: 172 SNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVS 231
Query: 370 LLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGD 429
LL R P + + + + + +++I + G++T+ + D
Sbjct: 232 ALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKTGSITSVQAVYVPADD 278
Query: 430 VTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSG 484
+T P + D + L + + PA++ S SR V G Y + +
Sbjct: 279 LTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARG--- 335
Query: 485 DIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 336 -VQSILQRYQELK 347
>gi|378581554|ref|ZP_09830199.1| F1 sector of membrane-bound ATP synthase, beta subunit [Pantoea
stewartii subsp. stewartii DC283]
gi|377815724|gb|EHT98834.1| F1 sector of membrane-bound ATP synthase, beta subunit [Pantoea
stewartii subsp. stewartii DC283]
Length = 465
Score = 511 bits (1315), Expect = e-141, Method: Compositional matrix adjust.
Identities = 243/363 (66%), Positives = 293/363 (80%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + + + + + +KN + + +VQQQ+G +VRTIA G ++G+KR V D KP
Sbjct: 16 VEFPQDAVPQVYSALEVKNGDARLVLEVQQQLGGGVVRTIAMGTSDGLKRGLEVADLKKP 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSP-----IHTLPPKFSNQIFNNNILETG 669
I PVG TLGRI+NVLG+PID KG++ + S IH P + Q + +LETG
Sbjct: 76 IQVPVGKATLGRIMNVLGEPIDMKGDLKEEDGSAVEVSSIHRPAPSYEEQSNSQELLETG 135
Query: 670 IKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDF 729
IKVIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDF
Sbjct: 136 IKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDF 195
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
YHEM +SNV+DKV+L+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TL
Sbjct: 196 YHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTL 255
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+
Sbjct: 256 AGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPA 315
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLDST+ LSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+E
Sbjct: 316 TTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQE 375
Query: 910 LKD 912
LKD
Sbjct: 376 LKD 378
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 146/333 (43%), Gaps = 28/333 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVE-----KIAPG 230
L +G + +K ++PVG LGRI+N GE ID K ++ VE + AP
Sbjct: 62 GLKRGLEVADLKKPIQVPVGKATLGRIMNVLGEPIDMKGDLKEEDGSAVEVSSIHRPAPS 121
Query: 231 IMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICI 289
++ + E L TGIK ID M P KG + + G GKT ++ I N + +
Sbjct: 122 YEEQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSV 181
Query: 290 YVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQ 349
+ +G++ + +++ N +D +V + + TG T+ E FRD G+
Sbjct: 182 FAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 241
Query: 350 DCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKI 409
D L+ D++ ++ A ++S LL R P V Y L E + +++I
Sbjct: 242 DVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERI 288
Query: 410 FNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSR 348
Query: 470 -----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 QLDPLVVGQEHYDVARG----VQSLLQRYQELK 377
>gi|359437811|ref|ZP_09227863.1| F-type H+-transporting ATPase subunit beta [Pseudoalteromonas sp.
BSi20311]
gi|392557191|ref|ZP_10304328.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas undina NCIMB
2128]
gi|358027513|dbj|GAA64112.1| F-type H+-transporting ATPase subunit beta [Pseudoalteromonas sp.
BSi20311]
Length = 461
Score = 511 bits (1315), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G T+G++R V +TG+ I PVG TLGRI+NVLG+PID G
Sbjct: 43 EVQQQLGGGVVRTIALGTTDGLRRGASVENTGEAIQVPVGTKTLGRIMNVLGEPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++ IH P + Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEDERMSIHRAAPTYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RIASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSS 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++GEEHY +A V+ LQ+YKELKD
Sbjct: 343 SRQLDPQVIGEEHYGIARGVQTVLQRYKELKD 374
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T + ++PVG + LGRI+N GE ID R ++ + AP ++
Sbjct: 63 GLRRGASVENTGEAIQVPVGTKTLGRIMNVLGEPIDEAGPIGEDERMSIHRAAPTYEEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 123 SSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 183 ERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 243 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERIASTKT 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDPQ 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y I + ++ +L +Y+EL+
Sbjct: 350 VIGEEHYGIARG----VQTVLQRYKELK 373
>gi|350563851|ref|ZP_08932671.1| ATP synthase F1, beta subunit [Thioalkalimicrobium aerophilum AL3]
gi|349778372|gb|EGZ32728.1| ATP synthase F1, beta subunit [Thioalkalimicrobium aerophilum AL3]
Length = 459
Score = 511 bits (1315), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQIG+ +VR IA G+++G+KR V TG I PVG TLGRI +VLG+ IDN G
Sbjct: 39 EVQQQIGDGVVRAIAMGSSDGLKRGMKVTGTGSAITVPVGKATLGRIFDVLGNAIDNAGA 98
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ + ++PIH PKF + +LETG+KVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 99 VETADRAPIHRKAPKFEELAASQELLETGVKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 158
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM E VLDKV+L+YGQMNEP GNRLRVA
Sbjct: 159 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNEGGVLDKVALVYGQMNEPPGNRLRVA 218
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG++QE
Sbjct: 219 LTGLTMAEFFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGQVQE 278
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VL+R IAE GIYPAIDPL+S
Sbjct: 279 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLNRSIAETGIYPAIDPLDST 338
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY VAN V+ LQ+YKELKD
Sbjct: 339 SRQLDPLVVGEEHYNVANGVQQTLQRYKELKD 370
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 143/336 (42%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L +G K T +PVG LGRI + G IDN +R + +
Sbjct: 51 AIAMGSSDGLKRGMKVTGTGSAITVPVGKATLGRIFDVLGNAIDNAGAVETADRAPIHRK 110
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP + + E L TG+K ID + P KG + + G GKT ++ I N +
Sbjct: 111 APKFEELAASQELLETGVKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 170
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++ +D +V + + TG T+ E+FRD
Sbjct: 171 YSVFAGVGERTREGNDFYHEMNEGGVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRD 230
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L D++ ++ A ++S LL R P + L E ++ +
Sbjct: 231 EGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGQV------Q 277
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L+ ++ + PAI+ S
Sbjct: 278 ERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLNRSIAETGIYPAIDPLDS 337
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y + + ++ L +Y+EL+
Sbjct: 338 TSRQLDPLVVGEEHYNV----ANGVQQTLQRYKELK 369
>gi|302880125|ref|YP_003848689.1| ATP synthase F1 subunit beta [Gallionella capsiferriformans ES-2]
gi|302582914|gb|ADL56925.1| ATP synthase F1, beta subunit [Gallionella capsiferriformans ES-2]
Length = 465
Score = 511 bits (1315), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R VV+T PI PVG TLGRI++VLG PID+ GE
Sbjct: 47 EVQQQLGDGVVRTIAMGSSDGLQRGMAVVNTNAPISVPVGAGTLGRIMDVLGRPIDDAGE 106
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ PIH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 107 IPCEERRPIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 166
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKVS+++GQMNEP GNRLRVA
Sbjct: 167 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVSMVFGQMNEPPGNRLRVA 226
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQE
Sbjct: 227 LTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 286
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDP+P+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 287 RITSTKVGSITSVQAVYVPADDLTDPAPATTFLHLDSTVVLSRDIASLGIYPAVDPLDSS 346
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY VA V+ LQ+YKEL+D
Sbjct: 347 SRQLDPLVVGEEHYSVARRVQQNLQRYKELRD 378
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 139/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID+ + + R + + AP +
Sbjct: 67 GLQRGMAVVNTNAPISVPVGAGTLGRIMDVLGRPIDDAGEIPCEERRPIHQKAPKFDELS 126
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 127 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 186
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 187 ERTREGNDFYHEMKDSNVLDKVSMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFF 246
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + RL ER I +
Sbjct: 247 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKV 293
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 294 GSITSVQAVYVPADDLTDPAPATTFLHLDSTVVLSRDIASLGIYPAVDPLDSSSRQLDPL 353
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + +++ + L +Y+EL
Sbjct: 354 VVGEEHYSVARRVQQN----LQRYKEL 376
>gi|167627186|ref|YP_001677686.1| F0F1 ATP synthase subunit beta [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254876292|ref|ZP_05249002.1| F0F1 ATP synthase subunit beta [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|189081334|sp|B0TWS7.1|ATPB_FRAP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|167597187|gb|ABZ87185.1| ATP synthase F1, beta subunit [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254842313|gb|EET20727.1| F0F1 ATP synthase subunit beta [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 458
Score = 511 bits (1315), Expect = e-141, Method: Compositional matrix adjust.
Identities = 240/356 (67%), Positives = 289/356 (81%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E N K + +N+K + +VQQQIG+ +VRTIA G+++G++R +V +T PI
Sbjct: 16 VEFSRDNTPKVYDALNVKEANLVLEVQQQIGDGVVRTIAMGSSDGLRRGMVVENTNAPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID G I + IH PP + + ILETGIKV+DL+
Sbjct: 76 VPVGHGTLGRIMNVLGEPIDEAGPIQYTETRSIHQAPPAYDELALSTEILETGIKVVDLI 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTV MMELI NIA EH G SVF GVGER+REGNDFY+EMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAGVGERTREGNDFYYEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVAL+GL+IAE FR+ +DVL+FIDNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVALVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLA EMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF+HLD
Sbjct: 256 LLGRMPSAVGYQPTLAAEMGALQERITSTKTGSITSVQAVYVPADDLTDPSPATTFSHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+TIVLSRQIAELGIYPA+DPL+S S+QLDP +VG +HY+ A V+ LQ+YKELKD
Sbjct: 316 ATIVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGHDHYETARAVQKVLQRYKELKD 371
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 153/387 (39%), Gaps = 31/387 (8%)
Query: 117 IIRFAYNIEYDYFDPRCLNQTLNIKFANNTVLSGQINGTTGYEEAAAQGFVAVLIDDLKN 176
+I ++E+ + + LN+K AN VL Q G A G
Sbjct: 9 VIGAVIDVEFSRDNTPKVYDALNVKEAN-LVLEVQQQIGDGVVRTIAMG-------SSDG 60
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G T +PVG LGRI+N GE ID ++ + P +
Sbjct: 61 LRRGMVVENTNAPISVPVGHGTLGRIMNVLGEPIDEAGPIQYTETRSIHQAPPAYDELAL 120
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK +D + P KG + + G GKT ++ I N K + ++ +G+
Sbjct: 121 STEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAGVGE 180
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + ++K N +D +V + + +G TI E FRD +D L+
Sbjct: 181 RTREGNDFYYEMKDSNVLDKVALVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFI 240
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + + L ER I + G
Sbjct: 241 DNIYRYTLAGTEVSALLGRMPSAVGYQPTLAAEMGALQER-------------ITSTKTG 287
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P S D I L + PA++ S SR V
Sbjct: 288 SITSVQAVYVPADDLTDPSPATTFSHLDATIVLSRQIAELGIYPAVDPLDSTSRQLDPLV 347
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y+ + ++ +L +Y+EL+
Sbjct: 348 VGHDHYETARA----VQKVLQRYKELK 370
>gi|187931020|ref|YP_001891004.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
mediasiatica FSC147]
gi|226740203|sp|B2SEY1.1|ATPB_FRATM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|187711929|gb|ACD30226.1| ATP synthase, F1 sector, subunit beta [Francisella tularensis
subsp. mediasiatica FSC147]
Length = 458
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/356 (67%), Positives = 290/356 (81%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E N K + +N+ + +VQQQIG+ +VRTIA G+++G++R V +T PI
Sbjct: 16 VEFARDNTPKVYDALNVVEAGLVLEVQQQIGDGVVRTIAMGSSDGLRRGMEVKNTNAPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID G I +K IH PP + + ILETGIKV+DL+
Sbjct: 76 VPVGHGTLGRIMNVLGEPIDEAGPIEYTEKRSIHQAPPAYDELALSTEILETGIKVVDLI 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTV MMELI NIA EH G SVF GVGER+REGNDFY+EMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAGVGERTREGNDFYYEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVAL+GL+IAE FR+ +DVL+FIDNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLA EMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF+HLD
Sbjct: 256 LLGRMPSAVGYQPTLAAEMGALQERITSTKTGSITSVQAVYVPADDLTDPSPATTFSHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+TIVLSRQIAELGIYPA+DPL+S S+QLDP +VG++HY++A V+ LQ+YKELKD
Sbjct: 316 ATIVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQDHYEIARAVQKVLQRYKELKD 371
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 139/327 (42%), Gaps = 23/327 (7%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G + T +PVG LGRI+N GE ID + ++ + P +
Sbjct: 61 LRRGMEVKNTNAPISVPVGHGTLGRIMNVLGEPIDEAGPIEYTEKRSIHQAPPAYDELAL 120
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK +D + P KG + + G GKT ++ I N K + ++ +G+
Sbjct: 121 STEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAGVGE 180
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + ++K N +D +V + + +G TI E FRD +D L+
Sbjct: 181 RTREGNDFYYEMKDSNVLDKVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFI 240
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P V Y + E + +++I + G
Sbjct: 241 DNIYRYTLAGTEVSALLGR------MPSAVGYQPTLAAEMGAL-------QERITSTKTG 287
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P S D I L + PA++ S SR V
Sbjct: 288 SITSVQAVYVPADDLTDPSPATTFSHLDATIVLSRQIAELGIYPAVDPLDSTSRQLDPLV 347
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y+I + ++ +L +Y+EL+
Sbjct: 348 VGQDHYEIARA----VQKVLQRYKELK 370
>gi|374704449|ref|ZP_09711319.1| F0F1 ATP synthase subunit beta [Pseudomonas sp. S9]
Length = 458
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V TG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVDSTGTNIQVPVGVKTLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P ++ Q +N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWGIHRPAPTYAEQAGSNELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 340 SRQLDPQVIGQEHYDTARGVQYVLQRYKELKD 371
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 142/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T ++PVG + LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLDVDSTGTNIQVPVGVKTLGRIMDVLGNPIDEAGPIGEEERWGIHRPAPTYAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
NE L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AGSNELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 TGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 346 QVIGQEHYDTARG----VQYVLQRYKELK 370
>gi|30248230|ref|NP_840300.1| F0F1 ATP synthase subunit beta [Nitrosomonas europaea ATCC 19718]
gi|81838782|sp|Q82XP8.1|ATPB_NITEU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|30180115|emb|CAD84117.1| FoF1-type ATP synthase beta subunit [Nitrosomonas europaea ATCC
19718]
Length = 460
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R +V +T K I PVG TLGRI++VLG PID GE
Sbjct: 41 EVQQQLGDGVVRTIALGSSDGLRRGMMVTNTQKQISVPVGTKTLGRIMDVLGRPIDEMGE 100
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + PIH P F + +LETGIKVIDL+CPF KGGKIGLFGGAGVGKTVNMM
Sbjct: 101 IGANSLMPIHRAAPAFDELSASTELLETGIKVIDLVCPFAKGGKIGLFGGAGVGKTVNMM 160
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 161 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 220
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQE
Sbjct: 221 LTGLTMAEAFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 280
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+S+K G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 281 RITSSKTGSITSIQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 340
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP I+GE+HY A EV+ LQ+YKEL+D
Sbjct: 341 SRQLDPLIIGEDHYNTAREVQQTLQRYKELRD 372
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 138/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T+K +PVG + LGRI++ G ID + + + + AP +
Sbjct: 61 GLRRGMMVTNTQKQISVPVGTKTLGRIMDVLGRPIDEMGEIGANSLMPIHRAAPAFDELS 120
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 121 ASTELLETGIKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 180
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 181 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEAFRDEGRDVLFF 240
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + RL ER I +
Sbjct: 241 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSSKT 287
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 288 GSITSIQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPL 347
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
+ G Y + +++ L +Y+EL
Sbjct: 348 IIGEDHYNTAR----EVQQTLQRYKEL 370
>gi|332143472|ref|YP_004429210.1| F0F1 ATP synthase subunit beta [Alteromonas macleodii str. 'Deep
ecotype']
gi|410863679|ref|YP_006978913.1| F0F1 ATP synthase subunit beta [Alteromonas macleodii AltDE1]
gi|226739971|sp|B4RS81.1|ATPB_ALTMD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|327553494|gb|AEB00213.1| F0F1 ATP synthase subunit beta [Alteromonas macleodii str. 'Deep
ecotype']
gi|410820941|gb|AFV87558.1| F0F1 ATP synthase subunit beta [Alteromonas macleodii AltDE1]
Length = 461
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G T+G+KR V +TG PI+ PVG TLGRI++VLG+PID G
Sbjct: 43 EVQQQLGGGVVRGIALGTTDGLKRGLTVENTGNPIMVPVGTKTLGRIMDVLGNPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERMSIHREAPSYEDQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY VA V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGQEHYDVARGVQTVLQRYKELKD 374
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 137/312 (43%), Gaps = 23/312 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG + LGRI++ G ID + R ++ + AP D+ S E L TGIK ID +
Sbjct: 79 VPVGTKTLGRIMDVLGNPIDEAGPIGEEERMSIHREAPSYEDQSSSVELLETGIKVIDLV 138
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 139 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMNDS 198
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
N +D +V + + TG T+ E FRD G+D L D++ ++ A ++S
Sbjct: 199 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 258
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P + L E + +++I + G++T+ + D+
Sbjct: 259 LLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSIQAVYVPADDL 305
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P + D + L ++ + PA++ S SR V G Y + +
Sbjct: 306 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDVARG---- 361
Query: 486 IRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 362 VQTVLQRYKELK 373
>gi|440757725|ref|ZP_20936906.1| ATP synthase beta chain [Pantoea agglomerans 299R]
gi|436428489|gb|ELP26145.1| ATP synthase beta chain [Pantoea agglomerans 299R]
Length = 433
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/337 (71%), Positives = 282/337 (83%), Gaps = 5/337 (1%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G ++G+KR V D KPI PVG TLGRI+NVLG+PID KGE
Sbjct: 10 EVQQQLGGGVVRTIAMGTSDGLKRGLNVNDLQKPIQVPVGKATLGRIMNVLGEPIDMKGE 69
Query: 641 INSKKKSP-----IHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGK 695
+ + S IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGK
Sbjct: 70 LKEEDGSAVEIASIHRAAPSYEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGK 129
Query: 696 TVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGN 755
TVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM +SNV+DKV+L+YGQMNEP GN
Sbjct: 130 TVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGN 189
Query: 756 RLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEM 815
RLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEM
Sbjct: 190 RLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEM 249
Query: 816 GKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
G LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLDST+ LSRQIA LGIYPA+D
Sbjct: 250 GVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVD 309
Query: 876 PLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
PL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 310 PLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQELKD 346
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 146/333 (43%), Gaps = 28/333 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVE-----KIAPG 230
L +G +K ++PVG LGRI+N GE ID K + ++ VE + AP
Sbjct: 30 GLKRGLNVNDLQKPIQVPVGKATLGRIMNVLGEPIDMKGELKEEDGSAVEIASIHRAAPS 89
Query: 231 IMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICI 289
D+ + E L TGIK ID M P KG + + G GKT ++ I N + +
Sbjct: 90 YEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSV 149
Query: 290 YVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQ 349
+ +G++ + +++ N +D +V + + TG T+ E FRD G+
Sbjct: 150 FAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 209
Query: 350 DCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKI 409
D L+ D++ ++ A ++S LL R P V Y L E + +++I
Sbjct: 210 DVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERI 256
Query: 410 FNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 257 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSR 316
Query: 470 -----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 317 QLDPLVVGQEHYDVARG----VQSLLQRYQELK 345
>gi|226326989|ref|ZP_03802507.1| hypothetical protein PROPEN_00849 [Proteus penneri ATCC 35198]
gi|225204826|gb|EEG87180.1| ATP synthase F1, beta subunit [Proteus penneri ATCC 35198]
Length = 460
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/345 (69%), Positives = 287/345 (83%), Gaps = 1/345 (0%)
Query: 568 FRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRI 627
++N K + + +VQQQ+G IVR IA G ++G+ R V D G PI PVG TLGRI
Sbjct: 30 LEVMNGKEKLVL-EVQQQLGGGIVRCIAMGTSDGLSRGLKVEDLGHPIEVPVGKATLGRI 88
Query: 628 LNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGL 687
+NVLG PID KG+I ++++ IH P + + +LETGIKV+DL+CPF KGGK+GL
Sbjct: 89 MNVLGTPIDMKGDIATEERWSIHREAPTYEELSNSQELLETGIKVMDLICPFAKGGKVGL 148
Query: 688 FGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYG 747
FGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YG
Sbjct: 149 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 208
Query: 748 QMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY 807
QMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGY
Sbjct: 209 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGY 268
Query: 808 QPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAE 867
QPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA
Sbjct: 269 QPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAS 328
Query: 868 LGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 329 LGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKD 373
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G K E+PVG LGRI+N G ID K + R ++ + AP +
Sbjct: 62 GLSRGLKVEDLGHPIEVPVGKATLGRIMNVLGTPIDMKGDIATEERWSIHREAPTYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|348031098|ref|YP_004873784.1| F0F1 ATP synthase subunit beta [Glaciecola nitratireducens FR1064]
gi|347948441|gb|AEP31791.1| F0F1 ATP synthase subunit beta [Glaciecola nitratireducens FR1064]
Length = 460
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G+T+G++R +V ++G+ I PVG TLGRI++VLG+PID G
Sbjct: 43 EVQQQLGGGVVRTIAMGSTDGLRRGLLVDNSGEAIQVPVGTATLGRIMDVLGNPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERMSIHREAPSYEDQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY VA V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGQEHYDVARGVQTVLQRYKELKD 374
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 137/313 (43%), Gaps = 23/313 (7%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDS 250
++PVG LGRI++ G ID + R ++ + AP D+ S E L TGIK ID
Sbjct: 78 QVPVGTATLGRIMDVLGNPIDEAGPIGEEERMSIHREAPSYEDQSSSVELLETGIKVIDL 137
Query: 251 MIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKY 309
+ P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 138 VCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNE 197
Query: 310 YNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQIS 369
N +D +V + + TG T+ E FRD G+D L D++ ++ A ++S
Sbjct: 198 SNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVS 257
Query: 370 LLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGD 429
LL R P + L E + +++I + G++T+ + D
Sbjct: 258 ALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSIQAVYVPADD 304
Query: 430 VTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSG 484
+T P + D + L ++ + PA++ S SR V G Y + +
Sbjct: 305 LTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDVARG--- 361
Query: 485 DIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 362 -VQTVLQRYKELK 373
>gi|24376219|ref|NP_720263.1| ATP synthase F1 beta subunit AtpD [Shewanella oneidensis MR-1]
gi|81588954|sp|Q8E8C0.1|ATPB_SHEON RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|24351279|gb|AAN57706.1| ATP synthase F1 beta subunit AtpD [Shewanella oneidensis MR-1]
Length = 463
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G ++G++R VV++G PI PVG TLGRI+NVLGDPID G
Sbjct: 44 EVQQQLGGGVVRTIAMGTSDGLRRGLEVVNSGSPISVPVGTATLGRIMNVLGDPIDEAGA 103
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 104 IGEEERYVIHRAAPSYEEQSNTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 163
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFY+EMK+S VLDKV+++YGQMNEP GNRLRVA
Sbjct: 164 ELINNIAKAHSGLSVFAGVGERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVA 223
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 224 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 283
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 284 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 343
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VAN V+ LQ+YKELKD
Sbjct: 344 SRQLDPLVVGQEHYDVANGVQTVLQRYKELKD 375
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + +PVG LGRI+N G+ ID + R + + AP ++
Sbjct: 64 GLRRGLEVVNSGSPISVPVGTATLGRIMNVLGDPIDEAGAIGEEERYVIHRAAPSYEEQS 123
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 124 NTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 183
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + TG T+ E FRD G+D L+
Sbjct: 184 ERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 243
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 244 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 290
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 291 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 350
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 351 VVGQEHYDV----ANGVQTVLQRYKELK 374
>gi|375258141|ref|YP_005017311.1| F0F1 ATP synthase subunit beta [Klebsiella oxytoca KCTC 1686]
gi|397660773|ref|YP_006501475.1| ATP synthase subunit beta [Klebsiella oxytoca E718]
gi|402842630|ref|ZP_10891041.1| ATP synthase F1, beta subunit [Klebsiella sp. OBRC7]
gi|423105622|ref|ZP_17093324.1| ATP synthase subunit beta [Klebsiella oxytoca 10-5242]
gi|423111094|ref|ZP_17098789.1| ATP synthase subunit beta [Klebsiella oxytoca 10-5243]
gi|423117107|ref|ZP_17104798.1| ATP synthase subunit beta [Klebsiella oxytoca 10-5245]
gi|365907619|gb|AEX03072.1| F0F1 ATP synthase subunit beta [Klebsiella oxytoca KCTC 1686]
gi|376376976|gb|EHS89751.1| ATP synthase subunit beta [Klebsiella oxytoca 10-5245]
gi|376377574|gb|EHS90343.1| ATP synthase subunit beta [Klebsiella oxytoca 10-5243]
gi|376380500|gb|EHS93246.1| ATP synthase subunit beta [Klebsiella oxytoca 10-5242]
gi|394348754|gb|AFN34875.1| ATP synthase beta chain [Klebsiella oxytoca E718]
gi|402278984|gb|EJU28028.1| ATP synthase F1, beta subunit [Klebsiella sp. OBRC7]
Length = 460
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 239/358 (66%), Positives = 292/358 (81%), Gaps = 2/358 (0%)
Query: 557 IELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + + + + + ++N + +VQQQ+G IVRTIA G+++G++R V D P
Sbjct: 16 VEFPQDAVPRVYEALEVQNGSENLVLEVQQQLGGGIVRTIAMGSSDGLRRGLEVKDLEHP 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVID 674
I PVG TLGRI+NVLG P+D KG+I +++ IH P + + +LETGIKVID
Sbjct: 76 IEVPVGKATLGRIMNVLGQPVDMKGDIGEEERWAIHRAAPSYEELSNSQELLETGIKVID 135
Query: 675 LLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMK 734
L+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM
Sbjct: 136 LMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMT 195
Query: 735 ESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEV 794
+SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEV
Sbjct: 196 DSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEV 255
Query: 795 SAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTH 854
SA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF H
Sbjct: 256 SALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315
Query: 855 LDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + E E+PVG LGRI+N G+ +D K + R + + AP +
Sbjct: 62 GLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQPVDMKGDIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|416061194|ref|ZP_11581079.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|444331333|ref|ZP_21148846.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
gi|347997822|gb|EGY38783.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|443552584|gb|ELT59863.1| F0F1 ATP synthase subunit beta [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
Length = 457
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/356 (67%), Positives = 293/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + ++ +++ +VQQQ+G +VR IA G ++G+KR V +T PI
Sbjct: 16 VEFPQDAVPKVYDALKVETGLTL-EVQQQLGGGVVRCIALGASDGLKRGLKVENTNDPIQ 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID + I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEQDPIGEEERWSIHRSAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNVARGVQGILQRYKELKD 370
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 146/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T ++PVG + LGRI+N GE ID + + R ++ + AP ++
Sbjct: 59 GLKRGLKVENTNDPIQVPVGTKTLGRIMNVLGEPIDEQDPIGEEERWSIHRSAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYNVARGVQG----ILQRYKELK 369
>gi|421727908|ref|ZP_16167066.1| F0F1 ATP synthase subunit beta [Klebsiella oxytoca M5al]
gi|423126544|ref|ZP_17114223.1| ATP synthase subunit beta [Klebsiella oxytoca 10-5250]
gi|376397178|gb|EHT09813.1| ATP synthase subunit beta [Klebsiella oxytoca 10-5250]
gi|410371391|gb|EKP26114.1| F0F1 ATP synthase subunit beta [Klebsiella oxytoca M5al]
Length = 460
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 239/358 (66%), Positives = 292/358 (81%), Gaps = 2/358 (0%)
Query: 557 IELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + + + + + ++N + +VQQQ+G IVRTIA G+++G++R V D P
Sbjct: 16 VEFPQDAVPRVYEALEVQNGSEKLVLEVQQQLGGGIVRTIAMGSSDGLRRGLEVKDLEHP 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVID 674
I PVG TLGRI+NVLG P+D KG+I +++ IH P + + +LETGIKVID
Sbjct: 76 IEVPVGKATLGRIMNVLGQPVDMKGDIGEEERWAIHRAAPSYEELSNSQELLETGIKVID 135
Query: 675 LLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMK 734
L+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM
Sbjct: 136 LMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMT 195
Query: 735 ESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEV 794
+SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEV
Sbjct: 196 DSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEV 255
Query: 795 SAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTH 854
SA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF H
Sbjct: 256 SALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315
Query: 855 LDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + E E+PVG LGRI+N G+ +D K + R + + AP +
Sbjct: 62 GLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQPVDMKGDIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|123444373|ref|YP_001008338.1| F0F1 ATP synthase subunit beta [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|418241601|ref|ZP_12868127.1| F0F1 ATP synthase subunit beta [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|420260646|ref|ZP_14763322.1| F0F1 ATP synthase subunit beta [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|166222426|sp|A1JTC6.1|ATPB_YERE8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|122091334|emb|CAL14220.1| ATP synthase beta subunit protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|330861780|emb|CBX71953.1| ATP synthase subunit beta [Yersinia enterocolitica W22703]
gi|351779015|gb|EHB21142.1| F0F1 ATP synthase subunit beta [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|404511906|gb|EKA25765.1| F0F1 ATP synthase subunit beta [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 460
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G+ R V++ PI PVG TLGRI+NVLGDPID KG
Sbjct: 42 EVQQQLGGGVVRCIAMGSSDGLSRGLKVINLEHPIEVPVGKSTLGRIMNVLGDPIDMKGP 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + + ++LETGIKV+DL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHREAPSYEDLASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 373
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G K E E+PVG LGRI+N G+ ID K + R + + AP D
Sbjct: 62 GLSRGLKVINLEHPIEVPVGKSTLGRIMNVLGDPIDMKGPIGEEERWAIHREAPSYEDLA 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S + L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 242 IDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|91795097|ref|YP_564748.1| F0F1 ATP synthase subunit beta [Shewanella denitrificans OS217]
gi|123165633|sp|Q12HQ1.1|ATPB_SHEDO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|91717099|gb|ABE57025.1| ATP synthase F1, beta subunit [Shewanella denitrificans OS217]
Length = 463
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 286/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G+++G++R VV+TG PI PVG TLGRI+NVLG+PID GE
Sbjct: 44 EVQQQLGGGVVRTIAMGSSDGLRRGLEVVNTGSPISVPVGVATLGRIMNVLGEPIDECGE 103
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 104 IGEEERYVIHRSAPSYEDQSSSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 163
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFY+EMK+S VLDKV+++YGQMNEP GNRLRVA
Sbjct: 164 ELINNIAKAHSGLSVFAGVGERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVA 223
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
L+GL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 224 LSGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 283
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK+G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 284 RITSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 343
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VAN V+ LQ+YKELKD
Sbjct: 344 SRQLDPQVVGQEHYDVANGVQTVLQRYKELKD 375
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 154/362 (42%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG LGRI+N GE ID + + R + + AP D+
Sbjct: 64 GLRRGLEVVNTGSPISVPVGVATLGRIMNVLGEPIDECGEIGEEERYVIHRSAPSYEDQS 123
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 124 SSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 183
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + +G T+ E FRD G+D L+
Sbjct: 184 ERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALSGLTMAEKFRDEGRDVLLF 243
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I + +
Sbjct: 244 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKS 290
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 291 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPQ 350
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y + + ++ +L +Y+EL+ +L KT + KI + Q
Sbjct: 351 VVGQEHYDV----ANGVQTVLQRYKELKDIIAILGMDELSDEDKTAVARARKIERFLSQP 406
Query: 528 PH 529
H
Sbjct: 407 FH 408
>gi|332163550|ref|YP_004300127.1| F0F1 ATP synthase subunit beta [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386310418|ref|YP_006006474.1| ATP synthase subunit beta [Yersinia enterocolitica subsp.
palearctica Y11]
gi|318608057|emb|CBY29555.1| ATP synthase beta chain [Yersinia enterocolitica subsp. palearctica
Y11]
gi|325667780|gb|ADZ44424.1| F0F1 ATP synthase subunit beta [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 435
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G+ R V++ PI PVG TLGRI+NVLGDPID KG
Sbjct: 17 EVQQQLGGGVVRCIAMGSSDGLSRGLKVINLEHPIEVPVGKSTLGRIMNVLGDPIDMKGP 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + + ++LETGIKV+DL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHREAPSYEDLASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G K E E+PVG LGRI+N G+ ID K + R + + AP D
Sbjct: 37 GLSRGLKVINLEHPIEVPVGKSTLGRIMNVLGDPIDMKGPIGEEERWAIHREAPSYEDLA 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S + L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 SSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 217 IDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDVARG----VQSILQRYQELK 347
>gi|67906678|gb|AAY82766.1| predicted F0F1-type ATP synthase beta subunit [uncultured bacterium
eBACred22E04]
Length = 459
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 239/347 (68%), Positives = 285/347 (82%)
Query: 566 KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLG 625
K F + + + +VQQQIG+ IVRTIA G+T+G+KR V +TG PI PVG+ TLG
Sbjct: 25 KVFDALKVDESGLTLEVQQQIGDGIVRTIAMGSTDGLKRGLSVNNTGAPINVPVGEKTLG 84
Query: 626 RILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKI 685
RI+NVLG+P+DN G+I ++K PIH P FS Q ILETGIKV+DL+CPF KG K+
Sbjct: 85 RIMNVLGEPVDNAGDIKAEKTMPIHRAAPTFSEQASEVEILETGIKVVDLICPFAKGSKV 144
Query: 686 GLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLI 745
GLFGGAGVGKTV +MELIRNIA EH G SVF GVGER+REGNDF+HEM ++ V+DKV+L+
Sbjct: 145 GLFGGAGVGKTVILMELIRNIAAEHSGFSVFAGVGERTREGNDFFHEMTDAKVIDKVALV 204
Query: 746 YGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAV 805
YGQMNEP GNRLRVALTGL++AE FR+ G D LLF+DNIYR+TLAGTEVSA+LGR PSAV
Sbjct: 205 YGQMNEPPGNRLRVALTGLTMAEHFRDEGSDTLLFVDNIYRYTLAGTEVSALLGRMPSAV 264
Query: 806 GYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQI 865
GYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR I
Sbjct: 265 GYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNI 324
Query: 866 AELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
AELGIYPA+DPL+S S+QLDP I+G+EHY V+ LQKYKELKD
Sbjct: 325 AELGIYPAVDPLDSTSRQLDPLIIGQEHYDTTRAVQGVLQKYKELKD 371
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 140/327 (42%), Gaps = 23/327 (7%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G T +PVG + LGRI+N GE +DN + + + AP ++ S
Sbjct: 61 LKRGLSVNNTGAPINVPVGEKTLGRIMNVLGEPVDNAGDIKAEKTMPIHRAAPTFSEQAS 120
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK +D + P KG + + G GKT I ++ I N + ++ +G+
Sbjct: 121 EVEILETGIKVVDLICPFAKGSKVGLFGGAGVGKTVILMELIRNIAAEHSGFSVFAGVGE 180
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++ +D +V + + TG T+ E+FRD G D L+
Sbjct: 181 RTREGNDFFHEMTDAKVIDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGSDTLLFV 240
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + L E + +++I + G
Sbjct: 241 DNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTG 287
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L N+ PA++ S SR +
Sbjct: 288 SITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAELGIYPAVDPLDSTSRQLDPLI 347
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y + + G +L +Y+EL+
Sbjct: 348 IGQEHYDTTRAVQG----VLQKYKELK 370
>gi|238787862|ref|ZP_04631659.1| ATP synthase subunit beta [Yersinia frederiksenii ATCC 33641]
gi|238724205|gb|EEQ15848.1| ATP synthase subunit beta [Yersinia frederiksenii ATCC 33641]
Length = 435
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G+ R VV+ PI PVG TLGRI+NVLGDPID KG
Sbjct: 17 EVQQQLGGGVVRCIAMGSSDGLSRGLKVVNLEHPIEVPVGKSTLGRIMNVLGDPIDMKGP 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + ++LETGIKV+DL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G K E E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 37 GLSRGLKVVNLEHPIEVPVGKSTLGRIMNVLGDPIDMKGPIGEEERWAIHREAPSYEELA 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S + L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 SSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 217 IDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDVARG----VQSILQRYQELK 347
>gi|333902651|ref|YP_004476524.1| ATP synthase subunit beta [Pseudomonas fulva 12-X]
gi|333117916|gb|AEF24430.1| ATP synthase subunit beta [Pseudomonas fulva 12-X]
Length = 458
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V TG I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLNVDSTGAGIQVPVGVKTLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P ++ Q +N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWGIHRAAPTYAEQSGSNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V++ LQ+YKELKD
Sbjct: 340 SRQLDPNVIGQEHYDTARGVQYVLQRYKELKD 371
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 142/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T ++PVG + LGRI++ G ID + R + + AP ++
Sbjct: 59 EGLKRGLNVDSTGAGIQVPVGVKTLGRIMDVLGNPIDEAGPIGEEERWGIHRAAPTYAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
NE L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 SGSNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 TGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 346 NVIGQEHYDTARG----VQYVLQRYKELK 370
>gi|381395691|ref|ZP_09921386.1| F-type H+-transporting ATPase subunit beta [Glaciecola punicea DSM
14233 = ACAM 611]
gi|379328570|dbj|GAB56519.1| F-type H+-transporting ATPase subunit beta [Glaciecola punicea DSM
14233 = ACAM 611]
Length = 462
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G+T+G++RN +V +TG+ I PVG TLGRI++VLG+PID G
Sbjct: 43 EVQQQLGGGVVRTIAMGSTDGLRRNLMVNNTGEAIQVPVGLATLGRIMDVLGNPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERMSIHREAPSYEDQSSSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVALVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDDGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGQEHYDTARGVQSVLQRYKELKD 374
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 138/318 (43%), Gaps = 23/318 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T + ++PVG LGRI++ G ID + R ++ + AP D+ S E L TGI
Sbjct: 73 TGEAIQVPVGLATLGRIMDVLGNPIDEAGPIGEEERMSIHREAPSYEDQSSSTELLETGI 132
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID + P KG + + G GKT ++ I N + ++ +G++ +
Sbjct: 133 KVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFY 192
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
+++ N +D +V + + TG T+ E FRD G+D L D++ ++ A
Sbjct: 193 HEMNDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDDGRDVLFFVDNIYRYTLA 252
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P + L E + +++I + G++T+ +
Sbjct: 253 GTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSIQAVY 299
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P + D + L ++ + PA++ S SR V G Y
Sbjct: 300 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDTA 359
Query: 480 KKLSGDIRIMLAQYRELE 497
+ ++ +L +Y+EL+
Sbjct: 360 RG----VQSVLQRYKELK 373
>gi|285019666|ref|YP_003377377.1| ATP synthase subunit beta [Xanthomonas albilineans GPE PC73]
gi|283474884|emb|CBA17383.1| probable atp synthase , beta subunit protein [Xanthomonas
albilineans GPE PC73]
Length = 468
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/362 (65%), Positives = 288/362 (79%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + ++ +VQQQ+G+ +VRTIA G+T+G+KRN + +TG+ I
Sbjct: 16 VEFARADVPKIYDALKVEGTAITLEVQQQLGDGVVRTIALGSTDGLKRNLVATNTGRAIA 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID GE+ + IH P + +Q +LETGIKVIDL+
Sbjct: 76 VPVGAGTLGRIMDVLGRPIDEAGEVQATDHWEIHRAAPTYEDQSSATELLETGIKVIDLM 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHAGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
NVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLF+DNIYR+TLA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKGKDVLLFVDNIYRYTLA 255
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STKNG+ITS+QA+YVPADDLTDPSP+T
Sbjct: 256 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKNGSITSIQAVYVPADDLTDPSPAT 315
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G EHY A V+ LQKYKEL
Sbjct: 316 TFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPNVIGHEHYDTARRVQSTLQKYKEL 375
Query: 911 KD 912
KD
Sbjct: 376 KD 377
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 29/324 (8%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T + +PVG LGRI++ G ID + + + + AP D+ S E L TGI
Sbjct: 70 TGRAIAVPVGAGTLGRIMDVLGRPIDEAGEVQATDHWEIHRAAPTYEDQSSATELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N K + ++ +G++ +
Sbjct: 130 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHAGLSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDL 358
+++K N +D +V + + TG T+ EYFRD G+D L+ D++
Sbjct: 190 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKGKDVLLFVDNI 249
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P V Y L E + +++I + NG++T
Sbjct: 250 YRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKNGSIT 296
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L N+ + PA++ S SR V G
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPNVIGH 356
Query: 474 AQYKIVKKLSGDIRIMLAQYRELE 497
Y ++ ++ L +Y+EL+
Sbjct: 357 EHYDTARR----VQSTLQKYKELK 376
>gi|333895842|ref|YP_004469717.1| F0F1 ATP synthase subunit beta [Alteromonas sp. SN2]
gi|332995860|gb|AEF05915.1| F0F1 ATP synthase subunit beta [Alteromonas sp. SN2]
Length = 461
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR+IA G+T+G++R V +T PI+ PVG TLGRI++VLG+PID G
Sbjct: 43 EVQQQLGGGVVRSIALGSTDGLQRGLAVENTENPIMVPVGTATLGRIMDVLGNPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + + IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEDRMSIHRAAPSYEDQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY VA V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGQEHYDVARGVQTVLQRYKELKD 374
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 146/336 (43%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
++ + L +G TE +PVG LGRI++ G ID ++R ++ +
Sbjct: 55 SIALGSTDGLQRGLAVENTENPIMVPVGTATLGRIMDVLGNPIDEAGPIGEEDRMSIHRA 114
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP D+ S E L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 115 APSYEDQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 174
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++ N +D +V + + TG T+ E FRD
Sbjct: 175 FSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRD 234
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L D++ ++ A ++S LL R P V Y L E + +
Sbjct: 235 EGRDVLFFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------Q 281
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L ++ + PA++ S
Sbjct: 282 ERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDS 341
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y + + ++ +L +Y+EL+
Sbjct: 342 TSRQLDPLVIGQEHYDVARG----VQTVLQRYKELK 373
>gi|407794057|ref|ZP_11141086.1| F0F1 ATP synthase subunit beta [Idiomarina xiamenensis 10-D-4]
gi|407213481|gb|EKE83337.1| F0F1 ATP synthase subunit beta [Idiomarina xiamenensis 10-D-4]
Length = 461
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 277/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVR IA G T+G++R +T +PI+ PVG TLGRI+NVLG+PID G
Sbjct: 43 EVQQQLGGGIVRAIALGTTDGLRRGASADNTREPIMVPVGTKTLGRIMNVLGEPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + + IH P + Q N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGADDRMSIHRAAPSYEEQSNTNELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVALVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+ LSR IA LGIYPA+DPL S
Sbjct: 283 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRDIASLGIYPAVDPLSST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVVGEEHYNVARGVQTVLQRYKELKD 374
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 147/336 (43%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L +G T + +PVG + LGRI+N GE ID +R ++ +
Sbjct: 55 AIALGTTDGLRRGASADNTREPIMVPVGTKTLGRIMNVLGEPIDEAGPIGADDRMSIHRA 114
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP ++ + NE L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 115 APSYEEQSNTNELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 174
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++ N +D +V + + TG T+ E FRD
Sbjct: 175 YSVFAGVGERTREGNDFYHEMNDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRD 234
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L D++ ++ A ++S LL R P + L E + +
Sbjct: 235 EGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------Q 281
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L ++ + PA++ S
Sbjct: 282 ERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRDIASLGIYPAVDPLSS 341
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y + + ++ +L +Y+EL+
Sbjct: 342 TSRQLDPLVVGEEHYNVARG----VQTVLQRYKELK 373
>gi|332308599|ref|YP_004436450.1| ATP synthase F1 subunit beta [Glaciecola sp. 4H-3-7+YE-5]
gi|410641040|ref|ZP_11351565.1| F-type H+-transporting ATPase subunit beta [Glaciecola chathamensis
S18K6]
gi|410647403|ref|ZP_11357835.1| F-type H+-transporting ATPase subunit beta [Glaciecola agarilytica
NO2]
gi|332175928|gb|AEE25182.1| ATP synthase F1, beta subunit [Glaciecola sp. 4H-3-7+YE-5]
gi|410132993|dbj|GAC06234.1| F-type H+-transporting ATPase subunit beta [Glaciecola agarilytica
NO2]
gi|410139400|dbj|GAC09752.1| F-type H+-transporting ATPase subunit beta [Glaciecola chathamensis
S18K6]
Length = 461
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G T+G++R V +TG+ I PVG TLGRI++VLG+PID G
Sbjct: 43 EVQQQLGGGVVRTIALGTTDGLRRGLAVENTGEAIQVPVGKATLGRIMDVLGNPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERMSIHREAPTYEDQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RIASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY+ A V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGQEHYETARGVQSVLQRYKELKD 374
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T + ++PVG LGRI++ G ID + R ++ + AP D+
Sbjct: 63 GLRRGLAVENTGEAIQVPVGKATLGRIMDVLGNPIDEAGPIGEEERMSIHREAPTYEDQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 123 SSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 183 ERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 243 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERIASTKT 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPL 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 350 VIGQEHYETARG----VQSVLQRYKELK 373
>gi|112791396|gb|ABI21968.1| ATP synthase beta subunit, partial [Pantoea cypripedii]
Length = 426
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/352 (68%), Positives = 288/352 (81%), Gaps = 7/352 (1%)
Query: 568 FRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLG 625
+ + +KN + + +VQQQ+G +VRTIA G ++G+KR V D KPI PVG TLG
Sbjct: 2 YSALEVKNGDARLVLEVQQQLGGGVVRTIAMGTSDGLKRGLEVTDLKKPIQVPVGKATLG 61
Query: 626 RILNVLGDPIDNKGEINSKKKSP-----IHTLPPKFSNQIFNNNILETGIKVIDLLCPFL 680
RI+NVLG+PID KG++ + S IH P + Q + +LETGIKVIDL+CPF
Sbjct: 62 RIMNVLGEPIDMKGDLKEEDGSAVEVSSIHRAAPSYEEQSNSQELLETGIKVIDLMCPFA 121
Query: 681 KGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD 740
KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM +SNV+D
Sbjct: 122 KGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 181
Query: 741 KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGR 800
KV+L+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR
Sbjct: 182 KVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 241
Query: 801 TPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIV 860
PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLDST+
Sbjct: 242 MPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVT 301
Query: 861 LSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 302 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQELKD 353
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 145/333 (43%), Gaps = 28/333 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVE-----KIAPG 230
L +G + +K ++PVG LGRI+N GE ID K ++ VE + AP
Sbjct: 37 GLKRGLEVTDLKKPIQVPVGKATLGRIMNVLGEPIDMKGDLKEEDGSAVEVSSIHRAAPS 96
Query: 231 IMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICI 289
++ + E L TGIK ID M P KG + + G GKT ++ I N + +
Sbjct: 97 YEEQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSV 156
Query: 290 YVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQ 349
+ +G++ + +++ N +D +V + + TG T+ E FRD G+
Sbjct: 157 FAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 216
Query: 350 DCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKI 409
D L+ D++ ++ A ++S LL R P + L E + +++I
Sbjct: 217 DVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERI 263
Query: 410 FNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSR 323
Query: 470 -----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 324 QLDPLVVGQEHYDVARG----VQSLLQRYQELK 352
>gi|270264094|ref|ZP_06192361.1| ATP synthase subunit beta [Serratia odorifera 4Rx13]
gi|386825694|ref|ZP_10112814.1| F0F1 ATP synthase subunit beta [Serratia plymuthica PRI-2C]
gi|421786309|ref|ZP_16222717.1| ATP synthase F1, beta subunit [Serratia plymuthica A30]
gi|270041743|gb|EFA14840.1| ATP synthase subunit beta [Serratia odorifera 4Rx13]
gi|386377436|gb|EIJ18253.1| F0F1 ATP synthase subunit beta [Serratia plymuthica PRI-2C]
gi|407751554|gb|EKF61729.1| ATP synthase F1, beta subunit [Serratia plymuthica A30]
Length = 460
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 239/361 (66%), Positives = 295/361 (81%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + + K + + ++N + +VQQQ+G +VR IA G ++G++R V+D
Sbjct: 13 VVDVEFPQDAVPKVYNALEVENGTDKLVLEVQQQLGGGVVRCIAMGTSDGLRRGLKVIDL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
PI PVG TLGRI+NVLG+PID KG+I +++ IH P + + + ++LETGIK
Sbjct: 73 DHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEERWAIHRPAPSYEDLANSQDLLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
V+DL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM +SNVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAG
Sbjct: 193 EMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K + E+PVG LGRI+N GE ID K + R + + AP D
Sbjct: 62 GLRRGLKVIDLDHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEERWAIHRPAPSYEDLA 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ + L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|112791394|gb|ABI21967.1| ATP synthase beta subunit, partial [Pantoea ananatis]
Length = 426
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/352 (68%), Positives = 289/352 (82%), Gaps = 7/352 (1%)
Query: 568 FRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLG 625
+ + +KN + + +VQQQ+G +VRTIA G ++G+KR V D KPI PVG TLG
Sbjct: 2 YSALEVKNGDARLVLEVQQQLGGGVVRTIAMGTSDGLKRGLEVTDLKKPIQVPVGKATLG 61
Query: 626 RILNVLGDPIDNKGEINSKKKSP-----IHTLPPKFSNQIFNNNILETGIKVIDLLCPFL 680
RI+NVLG+PID KG++ + S IH P + +Q + +LETGIKVIDL+CPF
Sbjct: 62 RIMNVLGEPIDMKGDLTEEDGSAVEVSSIHRPAPSYEDQSNSQELLETGIKVIDLMCPFA 121
Query: 681 KGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD 740
KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM +SNV+D
Sbjct: 122 KGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 181
Query: 741 KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGR 800
KV+L+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR
Sbjct: 182 KVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 241
Query: 801 TPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIV 860
PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLDST+
Sbjct: 242 MPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVT 301
Query: 861 LSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 302 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQELKD 353
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 145/333 (43%), Gaps = 28/333 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVE-----KIAPG 230
L +G + +K ++PVG LGRI+N GE ID K ++ VE + AP
Sbjct: 37 GLKRGLEVTDLKKPIQVPVGKATLGRIMNVLGEPIDMKGDLTEEDGSAVEVSSIHRPAPS 96
Query: 231 IMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICI 289
D+ + E L TGIK ID M P KG + + G GKT ++ I N + +
Sbjct: 97 YEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSV 156
Query: 290 YVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQ 349
+ +G++ + +++ N +D +V + + TG T+ E FRD G+
Sbjct: 157 FAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 216
Query: 350 DCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKI 409
D L+ D++ ++ A ++S LL R P + L E + +++I
Sbjct: 217 DVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERI 263
Query: 410 FNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSR 323
Query: 470 -----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 324 QLDPLVVGQEHYDVARG----VQSLLQRYQELK 352
>gi|406978641|gb|EKE00568.1| hypothetical protein ACD_21C00327G0004 [uncultured bacterium]
Length = 459
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/350 (69%), Positives = 287/350 (82%)
Query: 563 NIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDC 622
+I K + + + I + QQQ+G+ +VRTIA G+T+G+KRN V +T PI PVG
Sbjct: 22 SIPKIYDALKIDATGLILETQQQLGDGVVRTIAMGSTDGLKRNLTVTNTNNPITVPVGKS 81
Query: 623 TLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKG 682
TLGRI++VLG+PID +G I+S+ PIH LPP F+ Q N +LETGIK+IDLLCPF KG
Sbjct: 82 TLGRIMDVLGNPIDEQGPIHSEHFLPIHRLPPAFTEQSGNIALLETGIKIIDLLCPFAKG 141
Query: 683 GKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKV 742
GK+GLFGGAGVGKTV++MELIRNIAIEHKG SVF GVGER+REGND YHEM SNVLDKV
Sbjct: 142 GKVGLFGGAGVGKTVSIMELIRNIAIEHKGYSVFAGVGERTREGNDTYHEMHSSNVLDKV 201
Query: 743 SLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTP 802
SLIYGQMNEP GNRLRVALTGL++AE FR G+DVL FIDNIYR+TLAG EVSA+LGR P
Sbjct: 202 SLIYGQMNEPPGNRLRVALTGLTVAEYFREEGRDVLFFIDNIYRYTLAGVEVSALLGRMP 261
Query: 803 SAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLS 862
SAVGYQPTLAEEMG LQERI+STK G+ITS+QAIYVPADDLTDPSP TTF HLD+TIVLS
Sbjct: 262 SAVGYQPTLAEEMGMLQERITSTKTGSITSIQAIYVPADDLTDPSPVTTFAHLDATIVLS 321
Query: 863 RQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
RQI E GI+PA+DPL S S+QL+P IVG++HY A V+ LQ+YKEL+D
Sbjct: 322 RQIVEQGIFPAVDPLASTSRQLEPAIVGQDHYDTARAVQSTLQRYKELRD 371
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 131/311 (42%), Gaps = 23/311 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + ++ + ++ P ++ L TGIK ID +
Sbjct: 76 VPVGKSTLGRIMDVLGNPIDEQGPIHSEHFLPIHRLPPAFTEQSGNIALLETGIKIIDLL 135
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N ++ +G++ + +++
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVSIMELIRNIAIEHKGYSVFAGVGERTREGNDTYHEMHSS 195
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
N +D ++ + + TG T+ EYFR+ G+D L D++ ++ A ++S
Sbjct: 196 NVLDKVSLIYGQMNEPPGNRLRVALTGLTVAEYFREEGRDVLFFIDNIYRYTLAGVEVSA 255
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P V Y + + + + +++I + G++T+ I D+
Sbjct: 256 LLGR------MPSAVGY-------QPTLAEEMGMLQERITSTKTGSITSIQAIYVPADDL 302
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P + D I L + PA++ S SR + G Y +
Sbjct: 303 TDPSPVTTFAHLDATIVLSRQIVEQGIFPAVDPLASTSRQLEPAIVGQDHYDTARA---- 358
Query: 486 IRIMLAQYREL 496
++ L +Y+EL
Sbjct: 359 VQSTLQRYKEL 369
>gi|325981216|ref|YP_004293618.1| ATP synthase F1 subunit beta [Nitrosomonas sp. AL212]
gi|325530735|gb|ADZ25456.1| ATP synthase F1, beta subunit [Nitrosomonas sp. AL212]
Length = 459
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/356 (66%), Positives = 293/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + ++++ +VQQQ+G+ +VRTIA G+++G++R IV ++GK I
Sbjct: 16 VEFPRESLPKVYDALVMEDSELTLEVQQQLGDGVVRTIALGSSDGLRRGMIVQNSGKQIN 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G+I +++ IH P F + +LETGIKVIDL+
Sbjct: 76 VPVGTKTLGRIMDVLGRPIDEMGDIGAEQHMSIHREAPAFDELAASTELLETGIKVIDLI 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMKES
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKES 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
VLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 196 KVLDKVALVYGQMNEPPGNRLRVALTGLTMAESFRDEGRDVLFFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGRLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFGHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY A V+ LQ+YKEL+D
Sbjct: 316 ATVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGEEHYNTARAVQQTLQRYKELRD 371
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 135/327 (41%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + K +PVG + LGRI++ G ID + ++ + AP +
Sbjct: 60 GLRRGMIVQNSGKQINVPVGTKTLGRIMDVLGRPIDEMGDIGAEQHMSIHREAPAFDELA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 120 ASTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K +D +V + + TG T+ E FRD G+D L
Sbjct: 180 ERTREGNDFYHEMKESKVLDKVALVYGQMNEPPGNRLRVALTGLTMAESFRDEGRDVLFF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + RL ER I +
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 287 GSITSIQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPQ 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + ++ L +Y+EL
Sbjct: 347 VVGEEHYNTARA----VQQTLQRYKEL 369
>gi|261823738|ref|YP_003261844.1| F0F1 ATP synthase subunit beta [Pectobacterium wasabiae WPP163]
gi|421083277|ref|ZP_15544153.1| ATP synthase F1 [Pectobacterium wasabiae CFBP 3304]
gi|261607751|gb|ACX90237.1| ATP synthase F1, beta subunit [Pectobacterium wasabiae WPP163]
gi|401701841|gb|EJS92088.1| ATP synthase F1 [Pectobacterium wasabiae CFBP 3304]
Length = 460
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/361 (66%), Positives = 294/361 (81%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + + K + + ++N + +VQQQ+G IVR IA G+++G++R V +
Sbjct: 13 VVDVEFPQDAVPKVYDALEVENGAEKLVLEVQQQLGGGIVRCIAMGSSDGLRRGLNVNNL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
PI PVG TLGRI+NVLGDPID KG+I +++ IH P + + +LETGIK
Sbjct: 73 DHPIEVPVGKATLGRIMNVLGDPIDMKGDIGEEERWAIHRAAPSYEELSNSQELLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
VIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM +SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAG
Sbjct: 193 EMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 137/314 (43%), Gaps = 23/314 (7%)
Query: 190 FEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSID 249
E+PVG LGRI+N G+ ID K + R + + AP + + E L TGIK ID
Sbjct: 76 IEVPVGKATLGRIMNVLGDPIDMKGDIGEEERWAIHRAAPSYEELSNSQELLETGIKVID 135
Query: 250 SMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLK 308
M P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 136 LMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMT 195
Query: 309 YYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQI 368
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++
Sbjct: 196 DSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEV 255
Query: 369 SLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEG 428
S LL R P + L E + +++I + G++T+ +
Sbjct: 256 SALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPAD 302
Query: 429 DVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLS 483
D+T P + D + L + + PA++ S SR V G Y + +
Sbjct: 303 DLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARG-- 360
Query: 484 GDIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 361 --VQSILQRYQELK 372
>gi|112791358|gb|ABI21949.1| ATP synthase beta subunit, partial [Yersinia enterocolitica]
Length = 421
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G+ R V++ PI PVG TLGRI+NVLGDPID KG
Sbjct: 17 EVQQQLGGGVVRCIAMGSSDGLSRGLKVINLEHPIEVPVGKSTLGRIMNVLGDPIDMKGP 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + + ++LETGIKV+DL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHREAPSYEDLASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G K E E+PVG LGRI+N G+ ID K + R + + AP D
Sbjct: 37 GLSRGLKVINLEHPIEVPVGKSTLGRIMNVLGDPIDMKGPIGEEERWAIHREAPSYEDLA 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S + L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 SSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 217 IDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDVARG----VQSILQRYQELK 347
>gi|112791340|gb|ABI21940.1| ATP synthase beta subunit, partial [Enterobacter aerogenes]
Length = 421
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/338 (70%), Positives = 282/338 (83%)
Query: 575 NNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDP 634
N + +VQQQ+G +VR IA G+++G++R V D PI PVG TLGRI+NVLG P
Sbjct: 11 NESLVLEVQQQLGGGVVRAIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQP 70
Query: 635 IDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVG 694
ID KG+I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVG
Sbjct: 71 IDMKGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVG 130
Query: 695 KTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSG 754
KTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP G
Sbjct: 131 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPG 190
Query: 755 NRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
NRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 191 NRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 250
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+
Sbjct: 251 MGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAV 310
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 311 DPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 348
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 145/336 (43%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L +G + E E+PVG LGRI+N G+ ID K + R + +
Sbjct: 29 AIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRA 88
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP + S E L TGIK ID M P KG + + G GKT ++ I N +
Sbjct: 89 APSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 148
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++ N +D +V + + TG T+ E FRD
Sbjct: 149 YSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRD 208
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L+ D++ ++ A ++S LL R P + + + + + +
Sbjct: 209 EGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQ 255
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L + + PA++ S
Sbjct: 256 ERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDS 315
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y + ++ +L +Y+EL+
Sbjct: 316 TSRQLDPLVVGQEHYDTARG----VQSLLQRYQELK 347
>gi|394990099|ref|ZP_10382931.1| F0F1 ATP synthase subunit alpha [Sulfuricella denitrificans skB26]
gi|393790364|dbj|GAB72570.1| F0F1 ATP synthase subunit alpha [Sulfuricella denitrificans skB26]
Length = 511
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 234/402 (58%), Positives = 307/402 (76%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++T+G CT +I E+PVG L+GR+VNS G+ ID K + +EKI
Sbjct: 73 AVVLGEYEHITEGDTVKCTGRILEVPVGEALMGRVVNSLGQPIDGKGPINTTEKSPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KSID+M+PIG+GQRELIIGDRQTGKT +A+D IINQK VI
Sbjct: 133 APGVIARQSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGTGVI 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+INV+ KL+ + M +T+VVAATA+DSAA QYI+PY+GC++GEYFRD
Sbjct: 193 CIYVAIGQKASSIINVVRKLEEHGAMGHTIVVAATASDSAAMQYIAPYSGCSMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
GQD LIIYDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER+++IN +EK+
Sbjct: 253 GQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARINAEDVEKR 312
Query: 408 KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSV 467
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN GLSV
Sbjct: 313 SGVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGLSV 372
Query: 468 SRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMKQK 527
SRVGGAAQ K++KKL G IR+ LAQYREL +F++F+SDLD T+ QL G+ ++ LMKQ
Sbjct: 373 SRVGGAAQTKVIKKLGGGIRMALAQYRELAAFAQFASDLDEATRKQLERGKMVTELMKQA 432
Query: 528 PHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
++ + + L + + + +K+ FE + + +
Sbjct: 433 QFAPMTVADTALTLFAVNKGYLDDVDVKKALAFEAALHAFIK 474
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 155/340 (45%), Gaps = 29/340 (8%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I V TG+ + PVG+ +GR++N LG PID KG IN+ +KSPI
Sbjct: 71 VGAVVLGEYEHITEGDTVKCTGRILEVPVGEALMGRVVNSLGQPIDGKGPINTTEKSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GKT ++ I I
Sbjct: 131 KIAPGVIARQSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGKTAVAVDAI----INQ 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ +G+++ + +++E + ++ ++ + + +G S+
Sbjct: 187 KGTGVICIYVAIGQKASSIINVVRKLEEHGAMGHTIVVAATASDSAAMQYIAPYSGCSMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 247 EYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARINA 306
Query: 826 -----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
K G++T++ I A D++ P+ + D I L + GI PAI
Sbjct: 307 EDVEKRSGVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAI 366
Query: 875 DPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
+ S S+ + G KV + ++ L +Y+EL
Sbjct: 367 NAGLSVSR-----VGGAAQTKVIKKLGGGIRMALAQYREL 401
>gi|433548861|ref|ZP_20504907.1| ATP synthase beta chain [Yersinia enterocolitica IP 10393]
gi|431789902|emb|CCO67947.1| ATP synthase beta chain [Yersinia enterocolitica IP 10393]
Length = 447
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G+ R V++ PI PVG TLGRI+NVLGDPID KG
Sbjct: 29 EVQQQLGGGVVRCIAMGSSDGLSRGLKVINLEHPIEVPVGKSTLGRIMNVLGDPIDMKGP 88
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + + ++LETGIKV+DL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 89 IGEEERWAIHREAPSYEDLASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMM 148
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 149 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 208
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 209 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 268
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 269 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 328
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 329 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 360
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G K E E+PVG LGRI+N G+ ID K + R + + AP D
Sbjct: 49 GLSRGLKVINLEHPIEVPVGKSTLGRIMNVLGDPIDMKGPIGEEERWAIHREAPSYEDLA 108
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S + L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 109 SSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 168
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 169 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 228
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 229 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 275
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 276 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 335
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 336 VVGQEHYDVARG----VQSILQRYQELK 359
>gi|383192286|ref|YP_005202414.1| ATP synthase F1 subunit beta [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371590544|gb|AEX54274.1| ATP synthase, F1 beta subunit [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 460
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 239/361 (66%), Positives = 294/361 (81%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + + + + ++N S + +VQQQ+G +VR IA G ++G++R V +
Sbjct: 13 VVDVEFPQDAVPNVYNALEVENGTSKLVLEVQQQLGGGVVRCIAMGTSDGLRRGLKVNNL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
PI PVG TLGRI+NVLG+PID KGEI +++ IH P + + +LETGIK
Sbjct: 73 EHPIEVPVGKATLGRIMNVLGEPIDMKGEIGEEERRAIHRAAPSYEELANSQELLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
V+DL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VMDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM +SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAG
Sbjct: 193 EMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGALQERITSTKSGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K E E+PVG LGRI+N GE ID K + + R + + AP +
Sbjct: 62 GLRRGLKVNNLEHPIEVPVGKATLGRIMNVLGEPIDMKGEIGEEERRAIHRAAPSYEELA 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK +D M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVMDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I + +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGAL------QERITSTKS 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|337754580|ref|YP_004647091.1| ATP synthase subunit beta [Francisella sp. TX077308]
gi|336446185|gb|AEI35491.1| ATP synthase beta chain [Francisella sp. TX077308]
Length = 458
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/356 (66%), Positives = 289/356 (81%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E N K + +++ + +VQQQIG+ +VRTIA G+++G++R +V +T PI
Sbjct: 16 VEFSRDNTPKVYDALDVNETGLVLEVQQQIGDGVVRTIAMGSSDGLRRGMVVENTNAPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID G + + IH PP + + ILETGIKV+DL+
Sbjct: 76 VPVGQGTLGRIMNVLGEPIDEAGPVQYTETRSIHQAPPAYDELALSTEILETGIKVVDLI 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTV MMELI NIA EH G SVF GVGER+REGNDFY+EMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAGVGERTREGNDFYYEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVAL+GL+IAE FR+ +DVL+FIDNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVALVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLA EMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF+HLD
Sbjct: 256 LLGRMPSAVGYQPTLAAEMGALQERITSTKTGSITSVQAVYVPADDLTDPSPATTFSHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+TIVLSRQIAELGIYPA+DPL+S S+QLDP +VG+EHY+ A V+ LQ+YKELKD
Sbjct: 316 ATIVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQEHYETARAVQKVLQRYKELKD 371
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 136/327 (41%), Gaps = 23/327 (7%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G T +PVG LGRI+N GE ID ++ + P +
Sbjct: 61 LRRGMVVENTNAPISVPVGQGTLGRIMNVLGEPIDEAGPVQYTETRSIHQAPPAYDELAL 120
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK +D + P KG + + G GKT ++ I N K + ++ +G+
Sbjct: 121 STEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAGVGE 180
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + ++K N +D +V + + +G TI E FRD +D L+
Sbjct: 181 RTREGNDFYYEMKDSNVLDKVALVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFI 240
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P V Y + E + +++I + G
Sbjct: 241 DNIYRYTLAGTEVSALLGR------MPSAVGYQPTLAAEMGAL-------QERITSTKTG 287
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P S D I L + PA++ S SR V
Sbjct: 288 SITSVQAVYVPADDLTDPSPATTFSHLDATIVLSRQIAELGIYPAVDPLDSTSRQLDPLV 347
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y+ + ++ +L +Y+EL+
Sbjct: 348 VGQEHYETARA----VQKVLQRYKELK 370
>gi|117922561|ref|YP_871753.1| F0F1 ATP synthase subunit beta [Shewanella sp. ANA-3]
gi|166222416|sp|A0L2S8.1|ATPB_SHESA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|117614893|gb|ABK50347.1| ATP synthase F1, beta subunit [Shewanella sp. ANA-3]
Length = 463
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G ++G++R VV++G PI PVG TLGRI+NVLGDPID G
Sbjct: 44 EVQQQLGGGVVRTIAMGTSDGLRRGLEVVNSGSPISVPVGTATLGRIMNVLGDPIDEAGA 103
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 104 IGEEERYVIHRSAPSYEEQSNTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 163
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFY+EMK+S VLDKV+++YGQMNEP GNRLRVA
Sbjct: 164 ELINNIAKAHSGLSVFAGVGERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVA 223
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 224 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 283
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 284 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 343
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VAN V+ LQ+YKELKD
Sbjct: 344 SRQLDPLVVGQEHYDVANGVQTVLQRYKELKD 375
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + +PVG LGRI+N G+ ID + R + + AP ++
Sbjct: 64 GLRRGLEVVNSGSPISVPVGTATLGRIMNVLGDPIDEAGAIGEEERYVIHRSAPSYEEQS 123
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 124 NTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 183
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + TG T+ E FRD G+D L+
Sbjct: 184 ERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 243
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 244 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 290
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 291 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 350
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 351 VVGQEHYDV----ANGVQTVLQRYKELK 374
>gi|85060392|ref|YP_456094.1| F0F1 ATP synthase subunit beta [Sodalis glossinidius str.
'morsitans']
gi|118573748|sp|Q2NQ86.1|ATPB_SODGM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|84780912|dbj|BAE75689.1| ATP synthase beta subunit [Sodalis glossinidius str. 'morsitans']
Length = 460
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/361 (65%), Positives = 296/361 (81%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + + K + + ++N + + +V+QQ+G +VR IA G+++G++R V D
Sbjct: 13 VVDVEFPQDAVPKVYNALEVENGAAKLVLEVEQQLGGGVVRCIAMGSSDGLRRGLKVTDL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
+ I PVG TLGRI+NVLG+P+D KG+I +++ IH P + + ++LETGIK
Sbjct: 73 ERAIEVPVGKATLGRIMNVLGEPVDMKGDIGEEERWSIHRPAPSYEELASSQDLLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
VIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM +SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAG
Sbjct: 193 EMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K E+ E+PVG LGRI+N GE +D K + R ++ + AP +
Sbjct: 62 GLRRGLKVTDLERAIEVPVGKATLGRIMNVLGEPVDMKGDIGEEERWSIHRPAPSYEELA 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S + L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQDLLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|112791344|gb|ABI21942.1| ATP synthase beta subunit, partial [Shigella dysenteriae]
Length = 421
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 17 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRAAPSYEELSNYQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 348
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 37 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NYQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 217 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDTARG----VQSILQRYQELK 347
>gi|238783022|ref|ZP_04627049.1| ATP synthase subunit beta [Yersinia bercovieri ATCC 43970]
gi|238716023|gb|EEQ08008.1| ATP synthase subunit beta [Yersinia bercovieri ATCC 43970]
Length = 435
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G+ R V++ PI PVG TLGRI+NVLGDPID KG
Sbjct: 17 EVQQQLGGGVVRCIAMGSSDGLSRGLKVINLEHPIEVPVGKSTLGRIMNVLGDPIDMKGP 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + ++LETGIKV+DL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G K E E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 37 GLSRGLKVINLEHPIEVPVGKSTLGRIMNVLGDPIDMKGPIGEEERWAIHREAPSYEELA 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S + L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 SSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 217 IDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDVARG----VQSILQRYQELK 347
>gi|238750324|ref|ZP_04611826.1| ATP synthase subunit beta [Yersinia rohdei ATCC 43380]
gi|238765107|ref|ZP_04626041.1| ATP synthase subunit beta [Yersinia kristensenii ATCC 33638]
gi|238696659|gb|EEP89442.1| ATP synthase subunit beta [Yersinia kristensenii ATCC 33638]
gi|238711557|gb|EEQ03773.1| ATP synthase subunit beta [Yersinia rohdei ATCC 43380]
Length = 435
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G+ R V++ PI PVG TLGRI+NVLGDPID KG
Sbjct: 17 EVQQQLGGGVVRCIAMGSSDGLSRGLKVINLEHPIEVPVGKSTLGRIMNVLGDPIDMKGP 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + ++LETGIKV+DL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G K E E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 37 GLSRGLKVINLEHPIEVPVGKSTLGRIMNVLGDPIDMKGPIGEEERWAIHREAPSYEELA 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S + L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 SSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 217 IDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDVARG----VQSILQRYQELK 347
>gi|227113923|ref|ZP_03827579.1| F0F1 ATP synthase subunit beta [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 460
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/361 (66%), Positives = 294/361 (81%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + + K + + ++N + +VQQQ+G IVR IA G+++G++R V +
Sbjct: 13 VVDVEFPQDAVPKVYDALEVENGAEKLVLEVQQQLGGGIVRCIAMGSSDGLRRGLNVNNL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
PI PVG TLGRI+NVLGDPID KG+I +++ IH P + + +LETGIK
Sbjct: 73 DHPIEVPVGKATLGRIMNVLGDPIDMKGDIGEEERWAIHRSAPSYEELSNSQELLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
VIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM +SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAG
Sbjct: 193 EMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 137/314 (43%), Gaps = 23/314 (7%)
Query: 190 FEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSID 249
E+PVG LGRI+N G+ ID K + R + + AP + + E L TGIK ID
Sbjct: 76 IEVPVGKATLGRIMNVLGDPIDMKGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVID 135
Query: 250 SMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLK 308
M P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 136 LMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMT 195
Query: 309 YYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQI 368
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++
Sbjct: 196 DSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEV 255
Query: 369 SLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEG 428
S LL R P + L E + +++I + G++T+ +
Sbjct: 256 SALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPAD 302
Query: 429 DVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLS 483
D+T P + D + L + + PA++ S SR V G Y + +
Sbjct: 303 DLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARG-- 360
Query: 484 GDIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 361 --VQSILQRYQELK 372
>gi|238759558|ref|ZP_04620720.1| ATP synthase subunit beta [Yersinia aldovae ATCC 35236]
gi|238702217|gb|EEP94772.1| ATP synthase subunit beta [Yersinia aldovae ATCC 35236]
Length = 435
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G+ R V++ PI PVG TLGRI+NVLGDPID KG
Sbjct: 17 EVQQQLGGGVVRCIAMGSSDGLSRGLKVINLEHPIEVPVGKSTLGRIMNVLGDPIDMKGP 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + ++LETGIKV+DL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G K E E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 37 GLSRGLKVINLEHPIEVPVGKSTLGRIMNVLGDPIDMKGPIGEEERWAIHREAPSYEELA 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S + L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 SSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 217 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDVARG----VQSILQRYQELK 347
>gi|238793102|ref|ZP_04636730.1| ATP synthase subunit beta [Yersinia intermedia ATCC 29909]
gi|238727475|gb|EEQ19001.1| ATP synthase subunit beta [Yersinia intermedia ATCC 29909]
Length = 435
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G+ R V++ PI PVG TLGRI+NVLGDPID KG
Sbjct: 17 EVQQQLGGGVVRCIAMGSSDGLSRGLKVINLEHPIEVPVGKSTLGRIMNVLGDPIDMKGP 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + ++LETGIKV+DL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G K E E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 37 GLSRGLKVINLEHPIEVPVGKSTLGRIMNVLGDPIDMKGPIGEEERWAIHREAPSYEELA 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S + L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 SSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 217 IDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDVARG----VQSILQRYQELK 347
>gi|112791374|gb|ABI21957.1| ATP synthase beta subunit, partial [Brenneria salicis ATCC 15712]
Length = 421
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+V+QQ+G +VR IA G+++G++R V + G PI PVG TLGRI+NVLG+P+D KG+
Sbjct: 17 EVEQQLGGGVVRCIAMGSSDGLRRGLDVANLGHPIEVPVGKATLGRIMNVLGEPVDMKGD 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRAAPTYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 137/313 (43%), Gaps = 23/313 (7%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDS 250
E+PVG LGRI+N GE +D K + R + + AP + S E L TGIK ID
Sbjct: 52 EVPVGKATLGRIMNVLGEPVDMKGDIGEEERWAIHRAAPTYEELSSSQELLETGIKVIDL 111
Query: 251 MIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKY 309
M P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 112 MCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTD 171
Query: 310 YNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQIS 369
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++S
Sbjct: 172 SNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVS 231
Query: 370 LLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGD 429
LL R P + L E + +++I + G++T+ + D
Sbjct: 232 ALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPADD 278
Query: 430 VTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSG 484
+T P + D + L + + PA++ S SR V G Y + +
Sbjct: 279 LTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARG--- 335
Query: 485 DIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 336 -VQSILQRYQELK 347
>gi|56707243|ref|YP_169139.1| ATP synthase F0F1 subunit beta [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110669713|ref|YP_666270.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
tularensis FSC198]
gi|134301278|ref|YP_001121246.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
tularensis WY96-3418]
gi|254369928|ref|ZP_04985936.1| hypothetical protein FTBG_01520 [Francisella tularensis subsp.
tularensis FSC033]
gi|254375017|ref|ZP_04990497.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|379716444|ref|YP_005304780.1| ATP synthase subunit beta [Francisella tularensis subsp. tularensis
TIGB03]
gi|379725127|ref|YP_005317313.1| ATP synthase subunit beta [Francisella tularensis subsp. tularensis
TI0902]
gi|385793817|ref|YP_005830223.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
tularensis NE061598]
gi|387825295|ref|YP_005824766.1| ATP synthase subunit beta [Francisella cf. novicida 3523]
gi|421750996|ref|ZP_16188055.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
tularensis AS_713]
gi|421752852|ref|ZP_16189863.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
tularensis 831]
gi|421754669|ref|ZP_16191636.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
tularensis 80700075]
gi|421756584|ref|ZP_16193488.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
tularensis 80700103]
gi|421758449|ref|ZP_16195296.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
tularensis 70102010]
gi|424673687|ref|ZP_18110621.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
tularensis 70001275]
gi|81820830|sp|Q5NIK3.1|ATPB_FRATT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|123169682|sp|Q14K06.1|ATPB_FRAT1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|166201706|sp|A4IW24.1|ATPB_FRATW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|56603735|emb|CAG44697.1| ATP synthase beta chain [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110320046|emb|CAL08080.1| ATP synthase beta chain [Francisella tularensis subsp. tularensis
FSC198]
gi|134049055|gb|ABO46126.1| ATP synthase F1, beta subunit [Francisella tularensis subsp.
tularensis WY96-3418]
gi|151568174|gb|EDN33828.1| hypothetical protein FTBG_01520 [Francisella tularensis subsp.
tularensis FSC033]
gi|151572735|gb|EDN38389.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|282158352|gb|ADA77743.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
tularensis NE061598]
gi|332184761|gb|AEE27015.1| ATP synthase beta chain [Francisella cf. novicida 3523]
gi|377826576|gb|AFB79824.1| ATP synthase beta chain [Francisella tularensis subsp. tularensis
TI0902]
gi|377828121|gb|AFB78200.1| ATP synthase beta chain [Francisella tularensis subsp. tularensis
TIGB03]
gi|409089214|gb|EKM89266.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
tularensis 831]
gi|409089307|gb|EKM89358.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
tularensis AS_713]
gi|409090711|gb|EKM90723.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
tularensis 80700075]
gi|409092347|gb|EKM92323.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
tularensis 70102010]
gi|409093453|gb|EKM93398.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
tularensis 80700103]
gi|417435682|gb|EKT90561.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
tularensis 70001275]
Length = 458
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/356 (67%), Positives = 289/356 (81%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E N K + +N+ + +VQQQIG+ +VRTIA G+++G++R V +T PI
Sbjct: 16 VEFARDNTPKVYDALNVVEAGLVLEVQQQIGDGVVRTIAMGSSDGLRRGMEVKNTNAPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID G I +K IH PP + + ILETGIKV+DL+
Sbjct: 76 VPVGHGTLGRIMNVLGEPIDEAGPIEYTEKRSIHQAPPAYDELALSTEILETGIKVVDLI 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTV MMELI NIA EH G SVF GVGER+REGNDFY+EMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAGVGERTREGNDFYYEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVAL+GL+IAE FR+ +DVL+FIDNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLA EMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF+HLD
Sbjct: 256 LLGRMPSAVGYQPTLAAEMGALQERITSTKTGSITSVQAVYVPADDLTDPSPATTFSHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+TIVLSRQIAELGIYPA+DPL+S S+QLDP +VG++HY+ A V+ LQ+YKELKD
Sbjct: 316 ATIVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQDHYETARAVQKVLQRYKELKD 371
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 135/327 (41%), Gaps = 23/327 (7%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G + T +PVG LGRI+N GE ID + ++ + P +
Sbjct: 61 LRRGMEVKNTNAPISVPVGHGTLGRIMNVLGEPIDEAGPIEYTEKRSIHQAPPAYDELAL 120
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK +D + P KG + + G GKT ++ I N K + ++ +G+
Sbjct: 121 STEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAGVGE 180
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + ++K N +D +V + + +G TI E FRD +D L+
Sbjct: 181 RTREGNDFYYEMKDSNVLDKVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFI 240
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + + L ER I + G
Sbjct: 241 DNIYRYTLAGTEVSALLGRMPSAVGYQPTLAAEMGALQER-------------ITSTKTG 287
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P S D I L + PA++ S SR V
Sbjct: 288 SITSVQAVYVPADDLTDPSPATTFSHLDATIVLSRQIAELGIYPAVDPLDSTSRQLDPLV 347
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y+ + ++ +L +Y+EL+
Sbjct: 348 VGQDHYETARA----VQKVLQRYKELK 370
>gi|238797873|ref|ZP_04641365.1| ATP synthase subunit beta [Yersinia mollaretii ATCC 43969]
gi|238718289|gb|EEQ10113.1| ATP synthase subunit beta [Yersinia mollaretii ATCC 43969]
Length = 447
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G+ R V++ PI PVG TLGRI+NVLGDPID KG
Sbjct: 29 EVQQQLGGGVVRCIAMGSSDGLSRGLKVINLEHPIEVPVGKSTLGRIMNVLGDPIDMKGP 88
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + ++LETGIKV+DL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 89 IGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMM 148
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 149 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 208
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 209 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 268
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 269 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 328
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 329 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 360
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G K E E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 49 GLSRGLKVINLEHPIEVPVGKSTLGRIMNVLGDPIDMKGPIGEEERWAIHREAPSYEELA 108
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S + L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 109 SSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 168
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 169 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 228
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 229 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 275
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 276 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 335
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 336 VVGQEHYDVARG----VQSILQRYQELK 359
>gi|241664766|ref|YP_002983126.1| F0F1 ATP synthase subunit beta [Ralstonia pickettii 12D]
gi|309780425|ref|ZP_07675175.1| ATP synthase F1, beta subunit [Ralstonia sp. 5_7_47FAA]
gi|404395028|ref|ZP_10986831.1| ATP synthase subunit beta [Ralstonia sp. 5_2_56FAA]
gi|240866793|gb|ACS64454.1| ATP synthase F1, beta subunit [Ralstonia pickettii 12D]
gi|308920818|gb|EFP66465.1| ATP synthase F1, beta subunit [Ralstonia sp. 5_7_47FAA]
gi|348615060|gb|EGY64591.1| ATP synthase subunit beta [Ralstonia sp. 5_2_56FAA]
Length = 469
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG PI PVG TLGRI++VLG PID G
Sbjct: 50 EVQQQLGDGVVRTIALGSSDGLRRGMRVATTGAPISVPVGHGTLGRIMDVLGRPIDEAGP 109
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S +K IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 110 IASDEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 169
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 170 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 229
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 230 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 289
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 290 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 349
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY+VA+ VK LQ+YKEL+D
Sbjct: 350 SRQLDPQVVGQEHYEVADRVKKTLQRYKELRD 381
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 139/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG LGRI++ G ID + + + AP +
Sbjct: 70 GLRRGMRVATTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIASDEKRAIHQKAPKFDELS 129
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 130 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 189
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 190 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 249
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 250 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 296
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 297 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQ 356
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y++ + ++ L +Y+EL
Sbjct: 357 VVGQEHYEVADR----VKKTLQRYKEL 379
>gi|365847393|ref|ZP_09387882.1| ATP synthase F1, beta subunit [Yokenella regensburgei ATCC 43003]
gi|364572647|gb|EHM50187.1| ATP synthase F1, beta subunit [Yokenella regensburgei ATCC 43003]
Length = 460
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+ QQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG PID KG+
Sbjct: 42 EAQQQLGGGIVRTIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQPIDMKGD 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKV+DL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSSSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + E E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 62 GLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|238753980|ref|ZP_04615339.1| ATP synthase subunit beta [Yersinia ruckeri ATCC 29473]
gi|238707732|gb|EEQ00091.1| ATP synthase subunit beta [Yersinia ruckeri ATCC 29473]
Length = 435
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G+ R V + PI PVG TLGRI+NVLGDPID KG
Sbjct: 17 EVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGDPIDMKGP 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + ++LETGIKV+DL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G K E E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 37 GLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGDPIDMKGPIGEEERWAIHREAPSYEELA 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S + L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 SSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 217 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDVARG----VQSILQRYQELK 347
>gi|403060678|ref|YP_006648895.1| F0F1 ATP synthase subunit beta [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402808004|gb|AFR05642.1| F0F1 ATP synthase subunit beta [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 460
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/361 (66%), Positives = 294/361 (81%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + + K + + ++N + +VQQQ+G IVR IA G+++G++R V +
Sbjct: 13 VVDVEFPQDAVPKVYDALEVENGAEKLVLEVQQQLGGGIVRCIAMGSSDGLRRGLNVNNL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
PI PVG TLGRI+NVLGDPID KG+I +++ IH P + + +LETGIK
Sbjct: 73 DHPIEVPVGKATLGRIMNVLGDPIDMKGDIGEEERWAIHRSAPSYEELSNSQELLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
VIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM +SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAG
Sbjct: 193 EMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 137/314 (43%), Gaps = 23/314 (7%)
Query: 190 FEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSID 249
E+PVG LGRI+N G+ ID K + R + + AP + + E L TGIK ID
Sbjct: 76 IEVPVGKATLGRIMNVLGDPIDMKGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVID 135
Query: 250 SMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLK 308
M P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 136 LMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMT 195
Query: 309 YYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQI 368
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++
Sbjct: 196 DSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEV 255
Query: 369 SLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEG 428
S LL R P + L E + +++I + G++T+ +
Sbjct: 256 SALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPAD 302
Query: 429 DVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLS 483
D+T P + D + L + + PA++ S SR V G Y + +
Sbjct: 303 DLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARG-- 360
Query: 484 GDIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 361 --VQSILQRYQELK 372
>gi|34496127|ref|NP_900342.1| ATP synthase F0F1 subunit beta [Chromobacterium violaceum ATCC
12472]
gi|81656847|sp|Q7P095.1|ATPB_CHRVO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|34101981|gb|AAQ58348.1| H+-transporting two-sector ATPase, beta subunit [Chromobacterium
violaceum ATCC 12472]
Length = 465
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 235/338 (69%), Positives = 282/338 (83%), Gaps = 6/338 (1%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G+KR V +TG PI PVG TLGRI++VLG+P+D G
Sbjct: 40 EVQQQLGDGVVRTIAMGSSDGLKRGMAVANTGAPISVPVGAATLGRIMDVLGNPVDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ + + IH PKF +ILETGIKVIDLLCPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 VATDARRAIHQAAPKFDELSAAADILETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFYHEMK+SNVLDKV+++YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
LTGL++AE FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 220 LTGLTMAEHFRDEKDENGKGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 279
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG+LQERI+STK+G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+
Sbjct: 280 MGRLQERITSTKDGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAV 339
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP +VG+EHY VA V+ LQ+YKEL+D
Sbjct: 340 DPLDSTSRQLDPLVVGDEHYTVARGVQSTLQRYKELRD 377
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 140/333 (42%), Gaps = 29/333 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G +D R + + AP +
Sbjct: 60 GLKRGMAVANTGAPISVPVGAATLGRIMDVLGNPVDEAGPVATDARRAIHQAAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ + L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 AAADILETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ E+FRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEHFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L+ D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + +G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTKDGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
R V G Y + + ++ L +Y+EL
Sbjct: 347 RQLDPLVVGDEHYTVARG----VQSTLQRYKEL 375
>gi|157368257|ref|YP_001476246.1| F0F1 ATP synthase subunit beta [Serratia proteamaculans 568]
gi|333929825|ref|YP_004503404.1| ATP synthase F1 subunit beta [Serratia sp. AS12]
gi|333934778|ref|YP_004508356.1| ATP synthase F1 subunit beta [Serratia plymuthica AS9]
gi|386331648|ref|YP_006027818.1| ATP synthase F1 subunit beta [Serratia sp. AS13]
gi|166990375|sp|A8G7M8.1|ATPB_SERP5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|157320021|gb|ABV39118.1| ATP synthase F1, beta subunit [Serratia proteamaculans 568]
gi|333476385|gb|AEF48095.1| ATP synthase F1, beta subunit [Serratia plymuthica AS9]
gi|333493885|gb|AEF53047.1| ATP synthase F1, beta subunit [Serratia sp. AS12]
gi|333963981|gb|AEG30754.1| ATP synthase F1, beta subunit [Serratia sp. AS13]
Length = 460
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 240/361 (66%), Positives = 295/361 (81%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKN--NISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + + K + + ++N N + +VQQQ+G +VR IA G ++G++R V D
Sbjct: 13 VVDVEFPQDAVPKVYNALEVENGANKLVLEVQQQLGGGVVRCIAMGTSDGLRRGLKVTDL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
PI PVG TLGRI+NVLG+PID KG+I +++ IH P + + + ++LETGIK
Sbjct: 73 DHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEERWAIHRPAPSYEDLANSQDLLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
V+DL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM +SNVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAG
Sbjct: 193 EMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K + E+PVG LGRI+N GE ID K + R + + AP D
Sbjct: 62 GLRRGLKVTDLDHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEERWAIHRPAPSYEDLA 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ + L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|82701442|ref|YP_411008.1| F0F1 ATP synthase subunit alpha [Nitrosospira multiformis ATCC
25196]
gi|115312224|sp|Q2YCA5.1|ATPA1_NITMU RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
synthase F1 sector subunit alpha 1; AltName:
Full=F-ATPase subunit alpha 1
gi|82409507|gb|ABB73616.1| ATP synthase F1 subcomplex alpha subunit [Nitrosospira multiformis
ATCC 25196]
Length = 513
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 230/404 (56%), Positives = 314/404 (77%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++T+G CT +I E+PVG EL+GR+VN+ G+ ID K K+ E +EKI
Sbjct: 73 AVVLGEYEHITEGDTVKCTGRILEVPVGEELIGRVVNALGQPIDGKGPITTKHSEPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SVN+P+ TG+K+ID+M+PIG+GQRELIIGDRQTGKT +A+D IINQK +N+I
Sbjct: 133 APGVVWRQSVNQPVQTGLKAIDAMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGENMI 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ NV+ KL+ + M+YT+VVAATA++SAA Q+I+PY+GCT+GEYFRD
Sbjct: 193 CIYVAIGQKASSISNVVRKLEEHGAMEYTIVVAATASESAAMQFIAPYSGCTMGEYFRDT 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER+++++ ++EK+
Sbjct: 253 GRDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVSAAYVEKE 312
Query: 408 K--IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA P+IET GDVT+F+PTNVISITDGQIFL+++LFN+ RPAIN G+
Sbjct: 313 TNGAVKGKTGSLTALPVIETQAGDVTAFVPTNVISITDGQIFLESDLFNAGIRPAINAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKL G +R+ LAQYREL +F++F+SDLD T+ QL G+ ++ LMK
Sbjct: 373 SVSRVGGAAQTKVIKKLGGGVRLALAQYRELAAFAQFASDLDEATRKQLERGKMVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q + S+ E+ + L + + + + + FE + + R
Sbjct: 433 QPQYSTLSVSEMALTLFAVNKGYLDDVEVSRALAFESALRGFIR 476
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 156/339 (46%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I V TG+ + PVG+ +GR++N LG PID KG I +K PI
Sbjct: 71 VGAVVLGEYEHITEGDTVKCTGRILEVPVGEELIGRVVNALGQPIDGKGPITTKHSEPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + N ++TG+K ID + P +G + + G GKT ++ I N E+
Sbjct: 131 KIAPGVVWRQSVNQPVQTGLKAIDAMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGEN 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ ++ +++E ++ ++ +E + + +G ++ E F
Sbjct: 191 MIC-IYVAIGQKASSISNVVRKLEEHGAMEYTIVVAATASESAAMQFIAPYSGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R++G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 250 RDTGRDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVSAAYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D+T P+ + D I L + GI PAI+
Sbjct: 310 EKETNGAVKGKTGSLTALPVIETQAGDVTAFVPTNVISITDGQIFLESDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G KV + V+ L +Y+EL
Sbjct: 370 AGISVSR-----VGGAAQTKVIKKLGGGVRLALAQYREL 403
>gi|410616040|ref|ZP_11327035.1| F-type H+-transporting ATPase subunit beta [Glaciecola polaris LMG
21857]
gi|410164355|dbj|GAC31173.1| F-type H+-transporting ATPase subunit beta [Glaciecola polaris LMG
21857]
Length = 461
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G+T+G++R V ++G+ I PVG TLGRI++VLG+PID G
Sbjct: 43 EVQQQLGGGVVRTIAMGSTDGLRRGLAVENSGEAIQVPVGKATLGRIMDVLGNPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERMSIHRAAPTYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RIASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGQEHYDTARGVQSVLQRYKELKD 374
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + ++PVG LGRI++ G ID + R ++ + AP ++
Sbjct: 63 GLRRGLAVENSGEAIQVPVGKATLGRIMDVLGNPIDEAGPIGEEERMSIHRAAPTYEEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 123 SSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 183 ERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 243 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERIASTKT 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPL 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 350 VIGQEHYDTARG----VQSVLQRYKELK 373
>gi|300932367|ref|ZP_07147632.1| ATP synthase F1, beta subunit [Escherichia coli MS 187-1]
gi|300459872|gb|EFK23365.1| ATP synthase F1, beta subunit [Escherichia coli MS 187-1]
Length = 460
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+ PL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVAPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 62 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA+ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVAPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|183597137|ref|ZP_02958630.1| hypothetical protein PROSTU_00376 [Providencia stuartii ATCC 25827]
gi|386743433|ref|YP_006216612.1| F0F1 ATP synthase subunit beta [Providencia stuartii MRSN 2154]
gi|188023447|gb|EDU61487.1| ATP synthase F1, beta subunit [Providencia stuartii ATCC 25827]
gi|384480126|gb|AFH93921.1| F0F1 ATP synthase subunit beta [Providencia stuartii MRSN 2154]
Length = 460
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 240/345 (69%), Positives = 286/345 (82%), Gaps = 1/345 (0%)
Query: 568 FRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRI 627
++N K + + +VQQQ+G +VR IA G ++G+ R V + PI PVG TLGRI
Sbjct: 30 LEVVNGKEKLVL-EVQQQLGGGVVRCIAMGTSDGLSRGLEVKNLEHPIEVPVGKATLGRI 88
Query: 628 LNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGL 687
+NVLGDPID KG+I +++ IH P + + +LETGIKV+DL+CPF KGGK+GL
Sbjct: 89 MNVLGDPIDMKGDIGEEERWSIHRAAPSYEELSSSTELLETGIKVMDLICPFAKGGKVGL 148
Query: 688 FGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYG 747
FGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YG
Sbjct: 149 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 208
Query: 748 QMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY 807
QMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGY
Sbjct: 209 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGY 268
Query: 808 QPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAE 867
QPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA
Sbjct: 269 QPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAS 328
Query: 868 LGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LGIYPA+DPL+S S+QLDP IVG+EHY VA V+ LQ+Y+ELKD
Sbjct: 329 LGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSILQRYQELKD 373
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G + E E+PVG LGRI+N G+ ID K + R ++ + AP +
Sbjct: 62 GLSRGLEVKNLEHPIEVPVGKATLGRIMNVLGDPIDMKGDIGEEERWSIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSTELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + ++ +L +Y+EL+
Sbjct: 349 IVGQEHYDVARG----VQSILQRYQELK 372
>gi|262376922|ref|ZP_06070149.1| ATP synthase F1, beta subunit [Acinetobacter lwoffii SH145]
gi|262308267|gb|EEY89403.1| ATP synthase F1, beta subunit [Acinetobacter lwoffii SH145]
Length = 464
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/360 (66%), Positives = 293/360 (81%), Gaps = 7/360 (1%)
Query: 560 FEINII-KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTP 618
FE N + K + + + + +VQQQ+G+ +VRTIA G+T G+KR VV+TG PI P
Sbjct: 18 FERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNVVNTGAPISVP 77
Query: 619 VGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCP 678
VG TLGRI++VLG PID G + ++ + PIH P ++ Q + ++LETGIKVIDLLCP
Sbjct: 78 VGTATLGRIMDVLGRPIDEAGPVATEARLPIHRSAPSYAEQAASTDLLETGIKVIDLLCP 137
Query: 679 FLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV 738
F KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+SNV
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNV 197
Query: 739 LDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGT 792
LDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGT
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAGT 257
Query: 793 EVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTF 852
EVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+TTF
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTF 317
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA GIYPAIDPL+S S+QLDP +VG+EHY++A V+ LQ+YKELKD
Sbjct: 318 AHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKELKD 377
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 181/420 (43%), Gaps = 39/420 (9%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+ + ++++F N+V + Q++GT E Q G V + + + L +G
Sbjct: 8 QIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNV 67
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T +PVG LGRI++ G ID + R + + AP ++ + + L T
Sbjct: 68 VNTGAPISVPVGTATLGRIMDVLGRPIDEAGPVATEARLPIHRSAPSYAEQAASTDLLET 127
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 128 GIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 187
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYD 356
+++K N +D +V + + TG T+ EYFRD G+D L+ D
Sbjct: 188 FYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVD 247
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P V Y L E + +++I + +G+
Sbjct: 248 NIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKSGS 294
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VG 471
+T+ + D+T P + D + L ++ +S PAI+ S SR V
Sbjct: 295 ITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVV 354
Query: 472 GAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQL--YNGEKISLLMKQKPH 529
G Y+I + ++ +L +Y+EL+ ++ + +L Y KI Q H
Sbjct: 355 GQEHYEIARS----VQNVLQRYKELKDIIAILGMDELAEEDKLVVYRARKIQRFFSQPFH 410
>gi|340385023|ref|XP_003391010.1| PREDICTED: ATP synthase subunit beta-like [Amphimedon
queenslandica]
Length = 662
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/470 (55%), Positives = 334/470 (71%), Gaps = 38/470 (8%)
Query: 458 RPAINVGLSVSRVGGAAQYKIVKKLSGDIRIMLAQYRELES------FSKFSSDLDIVTK 511
R +N+ S + VG A V L G +++ML Y E ++KF + +
Sbjct: 129 RLGVNLLASTAHVGDA---PTVNALVGTVKVMLDAYSEGRVDRVFFIYNKFVNSM----- 180
Query: 512 TQLYNGEKISLLM--------KQKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEIN 563
TQ G + M K+ + +IVE+I ++ ++ F N
Sbjct: 181 TQTGGGGRTENEMMGRAPGASKETSMSSGNIVEVIGAVVDVQ--------------FPRN 226
Query: 564 II-KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDC 622
+ K + + ++N +++ +VQQQIG+ +VRTIA G+T+G++R +TG PI PVG
Sbjct: 227 AVPKVYDALKVENGLTL-EVQQQIGDGVVRTIAMGSTDGLQRGIGAENTGAPISVPVGTK 285
Query: 623 TLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKG 682
TLGRI++VLG P+D GE+ +++ IH P + +Q ILETGIKVIDL+CPF KG
Sbjct: 286 TLGRIMDVLGTPVDGAGEVGAEESWAIHRKAPSYVDQAAAVEILETGIKVIDLICPFNKG 345
Query: 683 GKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKV 742
GKIGLFGGAGVGKTV +MELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S VLDKV
Sbjct: 346 GKIGLFGGAGVGKTVTLMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSGVLDKV 405
Query: 743 SLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTP 802
+L+YGQMNEP GNRLRV LTGL++AE FR+ G+DVL F+DNIYR+TLAGTE SA+LGR P
Sbjct: 406 ALVYGQMNEPPGNRLRVGLTGLTMAEFFRDEGRDVLFFVDNIYRYTLAGTECSALLGRMP 465
Query: 803 SAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLS 862
SAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLS
Sbjct: 466 SAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATLVLS 525
Query: 863 RQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
RQIAELGIYPA+DPL+S S+QLDP +VG EHY VA V+ LQ+YKEL+D
Sbjct: 526 RQIAELGIYPAVDPLDSTSRQLDPLVVGAEHYDVARRVQGILQRYKELRD 575
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 137/311 (44%), Gaps = 23/311 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG + LGRI++ G +D + + + + AP +D+ + E L TGIK ID +
Sbjct: 280 VPVGTKTLGRIMDVLGTPVDGAGEVGAEESWAIHRKAPSYVDQAAAVEILETGIKVIDLI 339
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N + ++ +G++ + +++K
Sbjct: 340 CPFNKGGKIGLFGGAGVGKTVTLMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 399
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
+D +V + + TG T+ E+FRD G+D L D++ ++ A + S
Sbjct: 400 GVLDKVALVYGQMNEPPGNRLRVGLTGLTMAEFFRDEGRDVLFFVDNIYRYTLAGTECSA 459
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P V Y L E + +++I + G++T+ + D+
Sbjct: 460 LLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKTGSITSIQAVYVPADDL 506
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P + D + L + PA++ S SR V GA Y + +++ G
Sbjct: 507 TDPSPATTFAHLDATLVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGAEHYDVARRVQG- 565
Query: 486 IRIMLAQYREL 496
+L +Y+EL
Sbjct: 566 ---ILQRYKEL 573
>gi|239586335|gb|ACR83542.1| ATP synthase beta subunit [Pectobacterium carotovorum]
Length = 421
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVR IA G+++G++R V + PI PVG TLGRI+NVLGDPID KGE
Sbjct: 17 EVQQQLGGGIVRCIAMGSSDGLRRGLNVNNLDHPIEVPVGKATLGRIMNVLGDPIDMKGE 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRSAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 139/313 (44%), Gaps = 23/313 (7%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDS 250
E+PVG LGRI+N G+ ID K + + R + + AP + + E L TGIK ID
Sbjct: 52 EVPVGKATLGRIMNVLGDPIDMKGEIGEEERWAIHRSAPSYEELSNSQELLETGIKVIDL 111
Query: 251 MIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKY 309
M P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 112 MCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTD 171
Query: 310 YNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQIS 369
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++S
Sbjct: 172 SNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVS 231
Query: 370 LLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGD 429
LL R P + + + + + +++I + G++T+ + D
Sbjct: 232 ALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKTGSITSVQAVYVPADD 278
Query: 430 VTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSG 484
+T P + D + L + + PA++ S SR V G Y + +
Sbjct: 279 LTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARG--- 335
Query: 485 DIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 336 -VQSILQRYQELK 347
>gi|227327856|ref|ZP_03831880.1| F0F1 ATP synthase subunit beta [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 460
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/361 (66%), Positives = 294/361 (81%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + + K + + ++N + +VQQQ+G IVR IA G+++G++R V +
Sbjct: 13 VVDVEFPQDAVPKVYDALEVENGAEKLVLEVQQQLGGGIVRCIAMGSSDGLRRGLNVNNL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
PI PVG TLGRI+NVLGDPID KG+I +++ IH P + + +LETGIK
Sbjct: 73 NHPIEVPVGKATLGRIMNVLGDPIDMKGDIGEEERWAIHRSAPSYEELSNSQELLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
VIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM +SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAG
Sbjct: 193 EMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 137/314 (43%), Gaps = 23/314 (7%)
Query: 190 FEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSID 249
E+PVG LGRI+N G+ ID K + R + + AP + + E L TGIK ID
Sbjct: 76 IEVPVGKATLGRIMNVLGDPIDMKGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVID 135
Query: 250 SMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLK 308
M P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 136 LMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMT 195
Query: 309 YYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQI 368
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++
Sbjct: 196 DSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEV 255
Query: 369 SLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEG 428
S LL R P + L E + +++I + G++T+ +
Sbjct: 256 SALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPAD 302
Query: 429 DVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLS 483
D+T P + D + L + + PA++ S SR V G Y + +
Sbjct: 303 DLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARG-- 360
Query: 484 GDIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 361 --VQSILQRYQELK 372
>gi|392310411|ref|ZP_10272945.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas citrea NCIMB
1889]
Length = 461
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G T+G++R+T V TG+PI PVG TLGRI++VLG PID G
Sbjct: 43 EVQQQLGGGVVRAIALGTTDGLRRSTAVEGTGEPIKVPVGTKTLGRIMDVLGQPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++ IH P + Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEDERMSIHRAAPSYEEQSSSIELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RIASTKAGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSS 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPQVIGQEHYDTARGVQTVLQRYKELKD 374
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 144/336 (42%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L + T + ++PVG + LGRI++ G+ ID R ++ +
Sbjct: 55 AIALGTTDGLRRSTAVEGTGEPIKVPVGTKTLGRIMDVLGQPIDEAGPIGEDERMSIHRA 114
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP ++ S E L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 115 APSYEEQSSSIELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 174
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++ N +D +V + + TG T+ E FRD
Sbjct: 175 YSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRD 234
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L D++ ++ A ++S LL R P + L E + +
Sbjct: 235 EGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------Q 281
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L ++ + PA++ S
Sbjct: 282 ERIASTKAGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDS 341
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y + ++ +L +Y+EL+
Sbjct: 342 SSRQLDPQVIGQEHYDTARG----VQTVLQRYKELK 373
>gi|339481871|ref|YP_004693657.1| ATP synthase subunit alpha [Nitrosomonas sp. Is79A3]
gi|338804016|gb|AEJ00258.1| ATP synthase subunit alpha [Nitrosomonas sp. Is79A3]
Length = 513
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/404 (58%), Positives = 309/404 (76%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ +++ +G CT +I E+PVG LLGR+VN+ G+ ID K E +EKI
Sbjct: 73 AVIMGAYEHICEGDTVKCTGRILEVPVGEGLLGRVVNALGQPIDGKGPITAVRSEPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KS+DSM+P+G+GQRELIIGDRQTGKT +AID IINQK +N+
Sbjct: 133 APGVIWRQSVDQPVQTGLKSVDSMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQNMF 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ NV+ KL+ + M+YT+VVAATA++SAA Q+I+PY+GCT+GEYFRD
Sbjct: 193 CIYVAIGQKASSIANVVRKLEEHGAMEYTIVVAATASESAAMQFIAPYSGCTMGEYFRDK 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
GQD LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER+++++ ++EK
Sbjct: 253 GQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVSVAYVEKA 312
Query: 408 K--IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDVT+F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TAGAVKGKTGSLTALPIIETQAGDVTAFVPTNVISITDGQIFLETDLFNAGIRPAINAGV 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKL G IR+ LAQYREL +F++F+SDLD T+ QL G+ + LMK
Sbjct: 373 SVSRVGGAAQTKVIKKLGGGIRLALAQYRELAAFAQFASDLDEATRKQLERGKMATELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q + S+ E+ + L I N +F + +K+ FE + Y R
Sbjct: 433 QSQYATLSVSEMALTLFAINNGYFDDVEVKRALAFESALKSYIR 476
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 149/319 (46%), Gaps = 25/319 (7%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + PVG+ LGR++N LG PID KG I + + PI + P + + ++TG+
Sbjct: 91 TGRILEVPVGEGLLGRVVNALGQPIDGKGPITAVRSEPIEKIAPGVIWRQSVDQPVQTGL 150
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFY 730
K +D + P +G + + G GKT ++ I N ++ C +++ +G+++ +
Sbjct: 151 KSVDSMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQNMFC-IYVAIGQKASSIANVV 209
Query: 731 HEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLA 790
+++E ++ ++ +E + + +G ++ E FR+ G+D L+ D++ + A
Sbjct: 210 RKLEEHGAMEYTIVVAATASESAAMQFIAPYSGCTMGEYFRDKGQDALIVYDDLTKQAWA 269
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST---------------KNGTITSVQA 835
++S +L R P Y + +L ER + K G++T++
Sbjct: 270 YRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVSVAYVEKATAGAVKGKTGSLTALPI 329
Query: 836 IYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYK 895
I A D+T P+ + D I L + GI PAI+ S S+ + G K
Sbjct: 330 IETQAGDVTAFVPTNVISITDGQIFLETDLFNAGIRPAINAGVSVSR-----VGGAAQTK 384
Query: 896 VANE----VKFYLQKYKEL 910
V + ++ L +Y+EL
Sbjct: 385 VIKKLGGGIRLALAQYREL 403
>gi|34500002|gb|AAQ73583.1| ATP synthase beta subunit [Bibersteinia trehalosi]
Length = 444
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/356 (67%), Positives = 292/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G ++G+KR V +T K I
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGTSDGLKRGLKVENTHKAIE 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID G I ++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTATLGRIMNVLGEPIDEAGPIGEEEAWAIHRAAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH+ SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHRVYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQDTLQRYKELKD 370
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T K E+PVG LGRI+N GE ID + + + AP ++
Sbjct: 59 GLKRGLKVENTHKAIEVPVGTATLGRIMNVLGEPIDEAGPIGEEEAWAIHRAAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N V ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHRVYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ L +Y+EL+
Sbjct: 346 VVGEEHYNVARG----VQDTLQRYKELK 369
>gi|54113605|gb|AAV29436.1| NT02FT1772 [synthetic construct]
Length = 458
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/356 (67%), Positives = 289/356 (81%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E N K + +N+ + +VQQQIG+ +VRTIA G+++G++R V +T PI
Sbjct: 16 VEFARDNTPKVYDALNVVEAGLVLEVQQQIGDGVVRTIAMGSSDGLRRGMEVKNTNAPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID G I +K IH PP + + ILETGIKV+DL+
Sbjct: 76 VPVGHGTLGRIMNVLGEPIDEAGPIEYTEKRSIHQAPPAYDELALSTEILETGIKVVDLI 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTV MMELI NIA EH G SVF GVGER+REGNDFY+EMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAGVGERTREGNDFYYEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVAL+GL+IAE FR+ +DVL+FIDNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLA EMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF+HLD
Sbjct: 256 LLGRMPSAVGYQPTLAAEMGALQERITSTKTGSITSVQAVYVPADDLTDPSPATTFSHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+TIVLSRQIAELGIYPA+DPL+S S+QLDP +VG++HY+ A V+ LQ+YKELKD
Sbjct: 316 ATIVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQDHYETARAVQKVLQRYKELKD 371
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 138/327 (42%), Gaps = 23/327 (7%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G + T +PVG LGRI+N GE ID + ++ + P +
Sbjct: 61 LRRGMEVKNTNAPISVPVGHGTLGRIMNVLGEPIDEAGPIEYTEKRSIHQAPPAYDELAL 120
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK +D + P KG + + G GKT ++ I N K + ++ +G+
Sbjct: 121 STEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAGVGE 180
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + ++K N +D +V + + +G TI E FRD +D L+
Sbjct: 181 RTREGNDFYYEMKDSNVLDKVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFI 240
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P V Y + E + +++I + G
Sbjct: 241 DNIYRYTLAGTEVSALLGR------MPSAVGYQPTLAAEMGAL-------QERITSTKTG 287
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P S D I L + PA++ S SR V
Sbjct: 288 SITSVQAVYVPADDLTDPSPATTFSHLDATIVLSRQIAELGIYPAVDPLDSTSRQLDPLV 347
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y+ + ++ +L +Y+EL+
Sbjct: 348 VGQDHYETARA----VQKVLQRYKELK 370
>gi|417087632|ref|ZP_11954560.1| F0F1 ATP synthase subunit beta [Escherichia coli cloneA_i1]
gi|355349732|gb|EHF98935.1| F0F1 ATP synthase subunit beta [Escherichia coli cloneA_i1]
Length = 460
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGE
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGI PA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGISPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 62 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGISPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|83649673|ref|YP_438108.1| F0F1 ATP synthase subunit beta [Hahella chejuensis KCTC 2396]
gi|118573541|sp|Q2S6P1.1|ATPB_HAHCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|83637716|gb|ABC33683.1| ATP synthase F1, beta subunit [Hahella chejuensis KCTC 2396]
Length = 459
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/356 (66%), Positives = 294/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + + ++ + +VQQQ+G+ IVRTIA G+T G++R V +T PI
Sbjct: 16 VEFPRDTVPKVYDALKVEGGATTLEVQQQLGDGIVRTIAMGSTEGLRRGLQVENTNAPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG+PID KG I +++ PIH P +++Q + ++LETGIKVIDL+
Sbjct: 76 VPVGTQTLGRIMDVLGNPIDEKGPIGEEERMPIHRTAPGYADQSSSRDLLETGIKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFY+EM+ES
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAGVGERTREGNDFYYEMEES 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
VLDKV+++YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA
Sbjct: 196 KVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF+HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERITSTKVGSITSVQAVYVPADDLTDPSPATTFSHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA GIYPAIDPL+S S+QLDP ++G+EHY VA V+ LQ+YKELKD
Sbjct: 316 ATVVLSRDIAAKGIYPAIDPLDSTSRQLDPLVIGQEHYDVARGVQTVLQRYKELKD 371
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 146/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + T +PVG + LGRI++ G ID K + R + + APG D+
Sbjct: 59 EGLRRGLQVENTNAPISVPVGTQTLGRIMDVLGNPIDEKGPIGEEERMPIHRTAPGYADQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
S + L TGIK ID + P KG + + G GKT ++ I N K + + ++ +
Sbjct: 119 SSSRDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 GERTREGNDFYYEMEESKVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P S D + L ++ PAI+ S SR
Sbjct: 286 VGSITSVQAVYVPADDLTDPSPATTFSHLDATVVLSRDIAAKGIYPAIDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 346 LVIGQEHYDVARG----VQTVLQRYKELK 370
>gi|330447620|ref|ZP_08311268.1| ATP synthase F1, beta subunit [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491811|dbj|GAA05765.1| ATP synthase F1, beta subunit [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 461
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 243/362 (67%), Positives = 295/362 (81%), Gaps = 3/362 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS---INKVQQQIGENIVRTIAFGNTNGIKRNTIVVD 610
+ +E + ++ + + +NL ++ + +VQQQIG +VR IA G+++G++R VV+
Sbjct: 13 VVDVEFDQDSVPRVYDALNLVDSEHAELVLEVQQQIGSGVVRCIAMGSSDGLRRGLEVVN 72
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
T PI PVG+ TLGRI+NVLG PID GEI KKK IH P + +Q ++ +LETG+
Sbjct: 73 TKAPITVPVGEETLGRIMNVLGTPIDECGEIGEKKKYAIHRAAPSYEDQSNSSELLETGV 132
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFY 730
KVIDL+CPF KGGKIGLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFY
Sbjct: 133 KVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTGVGERTREGNDFY 192
Query: 731 HEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLA 790
+EMKE+ VLDKVS++YGQMNEP GNRLRVALTGL+IAE FR+ G+DVLLFIDNIYR+TLA
Sbjct: 193 YEMKEAGVLDKVSMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLLFIDNIYRYTLA 252
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+T
Sbjct: 253 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPAT 312
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLD+T+VLSR IA LG+YPAIDPL+S S+QLDP +VG+EHY VA V+ LQ+YKEL
Sbjct: 313 TFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQTVLQRYKEL 372
Query: 911 KD 912
KD
Sbjct: 373 KD 374
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 145/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T+ +PVG E LGRI+N G ID + K + + + AP D+
Sbjct: 63 GLRRGLEVVNTKAPITVPVGEETLGRIMNVLGTPIDECGEIGEKKKYAIHRAAPSYEDQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ +E L TG+K ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 123 NSSELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + TG TI E FRD G+D L+
Sbjct: 183 ERTREGNDFYYEMKEAGVLDKVSMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLLF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 243 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ PAI+ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPL 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 350 VVGQEHYDVARG----VQTVLQRYKELK 373
>gi|387770421|ref|ZP_10126601.1| ATP synthase F1, beta subunit [Pasteurella bettyae CCUG 2042]
gi|386904232|gb|EIJ69028.1| ATP synthase F1, beta subunit [Pasteurella bettyae CCUG 2042]
Length = 457
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 239/356 (67%), Positives = 293/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + ++ +++ +VQQQ+G +VR IA G ++G+KR V +TGK I
Sbjct: 16 VEFPQDAVPKVYDALKVETGLTL-EVQQQLGGGVVRCIAMGTSDGLKRGLSVSNTGKAIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+P+D +G I ++++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPVDERGPIGAEEEWAIHRAAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM +S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHNGYSVFAGVGERTREGNDFYHEMTDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKD 370
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG + LGRI+N GE +D + + + + AP ++
Sbjct: 59 GLKRGLSVSNTGKAISVPVGTKTLGRIMNVLGEPVDERGPIGAEEEWAIHRAAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N N ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHNGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|109900593|ref|YP_663848.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas atlantica T6c]
gi|123063994|sp|Q15MU4.1|ATPB2_PSEA6 RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
synthase F1 sector subunit beta 2; AltName:
Full=F-ATPase subunit beta 2
gi|109702874|gb|ABG42794.1| ATP synthase F1, beta subunit [Pseudoalteromonas atlantica T6c]
Length = 461
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G T+G++R V +TG+ I PVG TLGRI++VLG+PID G
Sbjct: 43 EVQQQLGGGVVRTIALGTTDGLRRGLTVDNTGEAIQVPVGKATLGRIMDVLGNPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERMSIHREAPTYEDQSSSIELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RIASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGQEHYDTARGVQSVLQRYKELKD 374
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T + ++PVG LGRI++ G ID + R ++ + AP D+
Sbjct: 63 GLRRGLTVDNTGEAIQVPVGKATLGRIMDVLGNPIDEAGPIGEEERMSIHREAPTYEDQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 123 SSIELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 183 ERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 243 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERIASTKT 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPL 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 350 VIGQEHYDTARG----VQSVLQRYKELK 373
>gi|429463143|ref|YP_007184606.1| ATP synthase F1 subunit beta [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
gi|429338657|gb|AFZ83080.1| ATP synthase F1 subunit beta [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
Length = 459
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/340 (70%), Positives = 288/340 (84%), Gaps = 1/340 (0%)
Query: 573 LKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLG 632
++NN+++ +VQQQ+G+ IVRTIA G+++G++R T PI PVGD TLGRI+NVLG
Sbjct: 28 IENNLTL-EVQQQLGDGIVRTIALGSSDGLRRGMRFSRTNAPISVPVGDGTLGRIMNVLG 86
Query: 633 DPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAG 692
+PID G I+ ++ PIH P F + +LETGIKVIDL+CPF KGGK+GLFGGAG
Sbjct: 87 EPIDKAGPISHVERRPIHREAPLFEELSPSIELLETGIKVIDLVCPFAKGGKVGLFGGAG 146
Query: 693 VGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEP 752
VGKTVNMMELI NIA +H G SVF GVGER+REGNDFYHEM+ESNVLDKVS+++GQMNEP
Sbjct: 147 VGKTVNMMELINNIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVSMVFGQMNEP 206
Query: 753 SGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLA 812
GNRLRVALTGL+IAE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLA
Sbjct: 207 PGNRLRVALTGLTIAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLA 266
Query: 813 EEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
EEMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYP
Sbjct: 267 EEMGRLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYP 326
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
A+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKEL+D
Sbjct: 327 AVDPLDSTSRQLDPQVVGEEHYSVARSVQQILQRYKELRD 366
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 137/326 (42%), Gaps = 23/326 (7%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G + T +PVG LGRI+N GE ID R + + AP +
Sbjct: 56 LRRGMRFSRTNAPISVPVGDGTLGRIMNVLGEPIDKAGPISHVERRPIHREAPLFEELSP 115
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G+
Sbjct: 116 SIELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVGE 175
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + ++++ N +D +V + + TG TI E FRD G+D L
Sbjct: 176 RTREGNDFYHEMEESNVLDKVSMVFGQMNEPPGNRLRVALTGLTIAEKFRDEGRDILFFV 235
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + + RL ER I + G
Sbjct: 236 DNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKTG 282
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P D + L ++ PA++ S SR V
Sbjct: 283 SITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQV 342
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYREL 496
G Y + + ++ +L +Y+EL
Sbjct: 343 VGEEHYSVARS----VQQILQRYKEL 364
>gi|212712645|ref|ZP_03320773.1| hypothetical protein PROVALCAL_03740 [Providencia alcalifaciens DSM
30120]
gi|422020478|ref|ZP_16367017.1| F0F1 ATP synthase subunit beta [Providencia alcalifaciens Dmel2]
gi|212684861|gb|EEB44389.1| hypothetical protein PROVALCAL_03740 [Providencia alcalifaciens DSM
30120]
gi|414101614|gb|EKT63213.1| F0F1 ATP synthase subunit beta [Providencia alcalifaciens Dmel2]
Length = 460
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/362 (66%), Positives = 295/362 (81%), Gaps = 4/362 (1%)
Query: 554 IKQIELFEINIIKYF---RIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVD 610
+ +E + N+ K + +IN K + + +VQQQ+G +VR IA G ++G+ R VV+
Sbjct: 13 VVDVEFPQDNVPKVYDALEVINGKEKLVL-EVQQQLGGGVVRCIAMGTSDGLSRGLEVVN 71
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
PI PVG TLGRI+NVLG+PID KG+I +++ IH P + + +LETGI
Sbjct: 72 LEHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEERWSIHRAAPSYEELANSTELLETGI 131
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFY 730
KV+DL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFY
Sbjct: 132 KVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFY 191
Query: 731 HEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLA 790
HEM +SNVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLA
Sbjct: 192 HEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLA 251
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+ST+ G+ITSVQA+YVPADDLTDPSP+T
Sbjct: 252 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTQTGSITSVQAVYVPADDLTDPSPAT 311
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+EL
Sbjct: 312 TFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQEL 371
Query: 911 KD 912
KD
Sbjct: 372 KD 373
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G + E E+PVG LGRI+N GE ID K + R ++ + AP +
Sbjct: 62 GLSRGLEVVNLEHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEERWSIHRAAPSYEELA 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSTELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTQT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|409203987|ref|ZP_11232187.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas flavipulchra JG1]
Length = 461
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+T+G++R T V T +PI PVG TLGRI+NVLGD ID G
Sbjct: 43 EVQQQLGGGVVRGIALGSTDGLRRGTPVQGTAEPIKVPVGTATLGRIMNVLGDAIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERWSIHRAAPSYEDQSNSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RIASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPQVIGQEHYDTARGVQTVLQRYKELKD 374
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T + ++PVG LGRI+N G+ ID + R ++ + AP D+
Sbjct: 63 GLRRGTPVQGTAEPIKVPVGTATLGRIMNVLGDAIDEAGPIGEEERWSIHRAAPSYEDQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 123 NSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 183 ERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 243 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERIASTKT 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPQ 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 350 VIGQEHYDTARG----VQTVLQRYKELK 373
>gi|167626199|ref|YP_001676493.1| F0F1 ATP synthase subunit beta [Shewanella halifaxensis HAW-EB4]
gi|189081345|sp|B0TQF4.1|ATPB_SHEHH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|167356221|gb|ABZ78834.1| ATP synthase F1, beta subunit [Shewanella halifaxensis HAW-EB4]
Length = 458
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/359 (66%), Positives = 293/359 (81%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + + + + +K+ + +VQQQ+G +VRTIA G ++G++R VV++G
Sbjct: 13 VVDVEFPHDAVPQIYDALEIKSEGLVLEVQQQLGGGVVRTIAMGTSDGLRRGLEVVNSGS 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI+NVLGDPID GEI +++ IH P + +Q + +LETGIKVI
Sbjct: 73 PISVPVGSATLGRIMNVLGDPIDECGEIGEQERYVIHREAPSYEDQSSSTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFY+EM
Sbjct: 133 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYYEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTE 793
K+S VLDKV+++YGQMNEP GNRLRVALTGL++AE+FR+ GKDVL F+DNIYR+TLAGTE
Sbjct: 193 KDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLFFVDNIYRYTLAGTE 252
Query: 794 VSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFT 853
VSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF
Sbjct: 253 VSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFA 312
Query: 854 HLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA +GIYPA+DPL+S S+QLDP +VG+EHY VA+ V+ LQ+YKELKD
Sbjct: 313 HLDATVVLSRNIASMGIYPAVDPLDSTSRQLDPLVVGQEHYDVASGVQTVLQRYKELKD 371
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + +PVG LGRI+N G+ ID + + R + + AP D+
Sbjct: 60 GLRRGLEVVNSGSPISVPVGSATLGRIMNVLGDPIDECGEIGEQERYVIHREAPSYEDQS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 SSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + TG T+ E FRD G+D L
Sbjct: 180 ERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLFF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASMGIYPAVDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 347 VVGQEHYDV----ASGVQTVLQRYKELK 370
>gi|242241387|ref|YP_002989568.1| F0F1 ATP synthase subunit beta [Dickeya dadantii Ech703]
gi|242133444|gb|ACS87746.1| ATP synthase F1, beta subunit [Dickeya dadantii Ech703]
Length = 460
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G++R VV+ PI PVG TLGRI+NVLGDP+D KG
Sbjct: 42 EVQQQLGGGVVRCIAMGSSDGLRRGLSVVNLEHPIEVPVGKATLGRIMNVLGDPVDMKGP 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWSIHRAAPSYEDLSNSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+ LSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 373
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N G+ +D K + R ++ + AP D
Sbjct: 62 GLRRGLSVVNLEHPIEVPVGKATLGRIMNVLGDPVDMKGPIGEEERWSIHRAAPSYEDLS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|112791356|gb|ABI21948.1| ATP synthase beta subunit, partial [Rahnella aquatilis]
Length = 421
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/347 (68%), Positives = 289/347 (83%), Gaps = 2/347 (0%)
Query: 568 FRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLG 625
+ + ++N S + +VQQQ+G +VR IA G ++G++R V + PI PVG TLG
Sbjct: 2 YSALEVENGTSKLVLEVQQQLGGGVVRCIAMGTSDGLRRGLKVNNLEHPIEVPVGKATLG 61
Query: 626 RILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKI 685
RI+NVLG+PID KGEI +++ IH P + + +LETGIKV+DL+CPF KGGK+
Sbjct: 62 RIMNVLGEPIDMKGEIGEEERRAIHRAAPSYEELANSQELLETGIKVMDLMCPFAKGGKV 121
Query: 686 GLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLI 745
GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181
Query: 746 YGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAV 805
YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAV
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAV 241
Query: 806 GYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQI 865
GYQPTLAEEMG LQERI+STK+G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQI
Sbjct: 242 GYQPTLAEEMGALQERITSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 301
Query: 866 AELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
A LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K E E+PVG LGRI+N GE ID K + + R + + AP +
Sbjct: 37 GLRRGLKVNNLEHPIEVPVGKATLGRIMNVLGEPIDMKGEIGEEERRAIHRAAPSYEELA 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK +D M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NSQELLETGIKVMDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I + +
Sbjct: 217 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGAL------QERITSTKS 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDVARG----VQSILQRYQELK 347
>gi|451811201|ref|YP_007447656.1| F-type H+-transporting ATPase subunit beta [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|451776359|gb|AGF47358.1| F-type H+-transporting ATPase subunit beta [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 471
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/340 (70%), Positives = 288/340 (84%), Gaps = 1/340 (0%)
Query: 573 LKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLG 632
++NN+++ +VQQQ+G+ IVRTIA G+++G++R T PI PVGD TLGRI+NVLG
Sbjct: 40 IENNLTL-EVQQQLGDGIVRTIALGSSDGLRRGMRFSRTNAPISVPVGDGTLGRIMNVLG 98
Query: 633 DPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAG 692
+PID G I+ ++ PIH P F + +LETGIKVIDL+CPF KGGK+GLFGGAG
Sbjct: 99 EPIDKAGPISHVERRPIHREAPLFEELSPSIELLETGIKVIDLVCPFAKGGKVGLFGGAG 158
Query: 693 VGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEP 752
VGKTVNMMELI NIA +H G SVF GVGER+REGNDFYHEM+ESNVLDKVS+++GQMNEP
Sbjct: 159 VGKTVNMMELINNIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVSMVFGQMNEP 218
Query: 753 SGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLA 812
GNRLRVALTGL+IAE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLA
Sbjct: 219 PGNRLRVALTGLTIAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLA 278
Query: 813 EEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
EEMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYP
Sbjct: 279 EEMGRLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYP 338
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
A+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKEL+D
Sbjct: 339 AVDPLDSTSRQLDPQVVGEEHYSVARSVQQILQRYKELRD 378
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 137/326 (42%), Gaps = 23/326 (7%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G + T +PVG LGRI+N GE ID R + + AP +
Sbjct: 68 LRRGMRFSRTNAPISVPVGDGTLGRIMNVLGEPIDKAGPISHVERRPIHREAPLFEELSP 127
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G+
Sbjct: 128 SIELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVGE 187
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + ++++ N +D +V + + TG TI E FRD G+D L
Sbjct: 188 RTREGNDFYHEMEESNVLDKVSMVFGQMNEPPGNRLRVALTGLTIAEKFRDEGRDILFFV 247
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + + RL ER I + G
Sbjct: 248 DNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKTG 294
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P D + L ++ PA++ S SR V
Sbjct: 295 SITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQV 354
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYREL 496
G Y + + ++ +L +Y+EL
Sbjct: 355 VGEEHYSVARS----VQQILQRYKEL 376
>gi|410634827|ref|ZP_11345454.1| F-type H+-transporting ATPase subunit beta [Glaciecola lipolytica
E3]
gi|410145571|dbj|GAC12659.1| F-type H+-transporting ATPase subunit beta [Glaciecola lipolytica
E3]
Length = 461
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR+IA G T+G+ R V +TG+PI PVG TLGRI++VLG+PID G
Sbjct: 43 EVQQQLGGGVVRSIALGTTDGLSRGLAVENTGEPINVPVGTKTLGRIMDVLGNPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERMSIHRAAPSYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RIASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPQVIGQEHYDTARGVQSVLQRYKELKD 374
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G T + +PVG + LGRI++ G ID + R ++ + AP ++
Sbjct: 63 GLSRGLAVENTGEPINVPVGTKTLGRIMDVLGNPIDEAGPIGEEERMSIHRAAPSYEEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 123 SSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 183 ERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 243 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERIASTKT 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPQ 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 350 VIGQEHYDTARG----VQSVLQRYKELK 373
>gi|331007712|ref|ZP_08330842.1| ATP synthase alpha chain [gamma proteobacterium IMCC1989]
gi|330418471|gb|EGG93007.1| ATP synthase alpha chain [gamma proteobacterium IMCC1989]
Length = 514
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 235/403 (58%), Positives = 308/403 (76%), Gaps = 2/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D + + +GQ C CT +I E+PVG EL GR+V++ G ID K K + +EKI
Sbjct: 74 AVVLGDYQTIAEGQSCKCTGRILEVPVGPELQGRVVDALGIPIDGKGPVDAKQTDAIEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ G+K+ID+M+P+G+GQRELIIGDRQTGKT IA+D IINQK K +
Sbjct: 134 APGVIARQSVDQPVQLGLKAIDAMVPVGRGQRELIIGDRQTGKTAIAVDAIINQKGKGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ +V+ KL+ + M++T++VAATA+D AA Q+++P+ GCT+GEY+RD
Sbjct: 194 CIYVAIGQKASSIASVVRKLEEHGAMEHTIIVAATASDPAAMQFLAPFAGCTMGEYYRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S+++ ++E+
Sbjct: 254 GEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVSTTYVEEF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA PIIET GDV++F+PTNVISITDGQIFLDT+LFNS RPA++ G+
Sbjct: 314 TKGEVKDKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLDTDLFNSGIRPAMDAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KIVKKLSG IR LAQYREL +FS+F+SDLD TK QL GE ++ LMK
Sbjct: 374 SVSRVGGAAQSKIVKKLSGGIRTALAQYRELAAFSQFASDLDDATKAQLDQGESVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
QK + SI E+ ++L + I + +I FE ++ Y
Sbjct: 434 QKQYTPLSIAEMGVVLFAANEGYLTDIDVAKIGAFESALLSYM 476
Score = 102 bits (255), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 150/339 (44%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ I TG+ + PVG GR+++ LG PID KG +++K+ I
Sbjct: 72 VGAVVLGDYQTIAEGQSCKCTGRILEVPVGPELQGRVVDALGIPIDGKGPVDAKQTDAIE 131
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++ G+K ID + P +G + + G GKT ++ I N +
Sbjct: 132 KIAPGVIARQSVDQPVQLGLKAIDAMVPVGRGQRELIIGDRQTGKTAIAVDAIINQKGKG 191
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ +++E ++ ++ ++P+ + G ++ E +
Sbjct: 192 IKC-IYVAIGQKASSIASVVRKLEEHGAMEHTIIVAATASDPAAMQFLAPFAGCTMGEYY 250
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A ++S +L R P Y + +L ER S
Sbjct: 251 RDRGEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVSTTYV 310
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + GI PA+D
Sbjct: 311 EEFTKGEVKDKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLDTDLFNSGIRPAMD 370
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G K+ + ++ L +Y+EL
Sbjct: 371 AGISVSR-----VGGAAQSKIVKKLSGGIRTALAQYREL 404
>gi|254361677|ref|ZP_04977814.1| H(+)-transporting two-sector ATPase, F(1) beta subunit [Mannheimia
haemolytica PHL213]
gi|452744438|ref|ZP_21944283.1| F0F1 ATP synthase subunit beta/H(+)-transporting two-sector ATPase,
F(1) subunit beta [Mannheimia haemolytica serotype 6
str. H23]
gi|153093199|gb|EDN74210.1| H(+)-transporting two-sector ATPase, F(1) beta subunit [Mannheimia
haemolytica PHL213]
gi|452087552|gb|EME03930.1| F0F1 ATP synthase subunit beta/H(+)-transporting two-sector ATPase,
F(1) subunit beta [Mannheimia haemolytica serotype 6
str. H23]
Length = 457
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/356 (67%), Positives = 293/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G+++G+KR V +T K I
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGSSDGLKRGLKVENTNKAIE 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID G I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEAGPIGEEERWTIHRAAPSYEEQANSTELLETGIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
PF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 APFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKD 370
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 146/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T K E+PVG + LGRI+N GE ID + R T+ + AP ++
Sbjct: 59 GLKRGLKVENTNKAIEVPVGTKTLGRIMNVLGEPIDEAGPIGEEERWTIHRAAPSYEEQA 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLVAPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G L +Y+EL+
Sbjct: 346 VVGEEHYNVARGVQG----TLQRYKELK 369
>gi|261491751|ref|ZP_05988331.1| ATP synthase beta subunit [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261495499|ref|ZP_05991946.1| ATP synthase beta subunit [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261308833|gb|EEY10089.1| ATP synthase beta subunit [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261312590|gb|EEY13713.1| ATP synthase beta subunit [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 463
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/356 (67%), Positives = 293/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G+++G+KR V +T K I
Sbjct: 22 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGSSDGLKRGLKVENTNKAIE 80
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID G I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 81 VPVGTKTLGRIMNVLGEPIDEAGPIGEEERWTIHRAAPSYEEQANSTELLETGIKVIDLV 140
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
PF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 141 APFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 200
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 201 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 260
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 261 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 320
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 321 STVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKD 376
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 146/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T K E+PVG + LGRI+N GE ID + R T+ + AP ++
Sbjct: 65 GLKRGLKVENTNKAIEVPVGTKTLGRIMNVLGEPIDEAGPIGEEERWTIHRAAPSYEEQA 124
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 125 NSTELLETGIKVIDLVAPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 184
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 185 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 244
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 245 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 291
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 292 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPL 351
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G L +Y+EL+
Sbjct: 352 VVGEEHYNVARGVQG----TLQRYKELK 375
>gi|114049501|ref|YP_740051.1| F0F1 ATP synthase subunit beta [Shewanella sp. MR-7]
gi|123030131|sp|Q0HPG1.1|ATPB_SHESR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|113890943|gb|ABI44994.1| ATP synthase F1, beta subunit [Shewanella sp. MR-7]
Length = 463
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G ++G++R VV++G PI PVG TLGRI+NVLG+PID G
Sbjct: 44 EVQQQLGGGVVRTIAMGTSDGLRRGLEVVNSGSPISVPVGTATLGRIMNVLGEPIDEAGA 103
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 104 IGEEERYVIHRSAPSYEDQSNTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 163
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFY+EMK+S VLDKV+++YGQMNEP GNRLRVA
Sbjct: 164 ELINNIAKAHSGLSVFAGVGERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVA 223
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 224 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 283
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 284 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 343
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VAN V+ LQ+YKELKD
Sbjct: 344 SRQLDPLVVGQEHYDVANGVQTVLQRYKELKD 375
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + +PVG LGRI+N GE ID + R + + AP D+
Sbjct: 64 GLRRGLEVVNSGSPISVPVGTATLGRIMNVLGEPIDEAGAIGEEERYVIHRSAPSYEDQS 123
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 124 NTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 183
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + TG T+ E FRD G+D L+
Sbjct: 184 ERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 243
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 244 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 290
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 291 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 350
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 351 VVGQEHYDV----ANGVQTVLQRYKELK 374
>gi|113972252|ref|YP_736045.1| F0F1 ATP synthase subunit beta [Shewanella sp. MR-4]
gi|123029180|sp|Q0HD79.1|ATPB_SHESM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|113886936|gb|ABI40988.1| ATP synthase F1, beta subunit [Shewanella sp. MR-4]
Length = 463
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G ++G++R VV++G PI PVG TLGRI+NVLG+PID G
Sbjct: 44 EVQQQLGGGVVRTIAMGTSDGLRRGLEVVNSGSPISVPVGTATLGRIMNVLGEPIDEAGA 103
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 104 IGEEERYVIHRSAPSYEDQSNTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 163
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFY+EMK+S VLDKV+++YGQMNEP GNRLRVA
Sbjct: 164 ELINNIAKAHSGLSVFAGVGERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVA 223
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 224 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 283
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 284 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 343
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VAN V+ LQ+YKELKD
Sbjct: 344 SRQLDPLVVGQEHYDVANGVQTVLQRYKELKD 375
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + +PVG LGRI+N GE ID + R + + AP D+
Sbjct: 64 GLRRGLEVVNSGSPISVPVGTATLGRIMNVLGEPIDEAGAIGEEERYVIHRSAPSYEDQS 123
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 124 NTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 183
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + TG T+ E FRD G+D L+
Sbjct: 184 ERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 243
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 244 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 290
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 291 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 350
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 351 VVGQEHYDV----ANGVQTVLQRYKELK 374
>gi|112791380|gb|ABI21960.1| ATP synthase beta subunit, partial [Pectobacterium wasabiae CFBP
3304]
Length = 421
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVR IA G+++G++R V + PI PVG TLGRI+NVLGDPID KG+
Sbjct: 17 EVQQQLGGGIVRCIAMGSSDGLRRGLNVNNLDHPIEVPVGKATLGRIMNVLGDPIDMKGD 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 137/313 (43%), Gaps = 23/313 (7%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDS 250
E+PVG LGRI+N G+ ID K + R + + AP + + E L TGIK ID
Sbjct: 52 EVPVGKATLGRIMNVLGDPIDMKGDIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDL 111
Query: 251 MIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKY 309
M P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 112 MCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTD 171
Query: 310 YNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQIS 369
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++S
Sbjct: 172 SNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVS 231
Query: 370 LLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGD 429
LL R P + L E + +++I + G++T+ + D
Sbjct: 232 ALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPADD 278
Query: 430 VTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSG 484
+T P + D + L + + PA++ S SR V G Y + +
Sbjct: 279 LTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARG--- 335
Query: 485 DIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 336 -VQSILQRYQELK 347
>gi|442610539|ref|ZP_21025253.1| ATP synthase beta chain [Pseudoalteromonas luteoviolacea B = ATCC
29581]
gi|441747871|emb|CCQ11315.1| ATP synthase beta chain [Pseudoalteromonas luteoviolacea B = ATCC
29581]
Length = 461
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G T+G++R V TG+PI PVG TLGRI+NVLGD ID G
Sbjct: 43 EVQQQLGGGVVRAIALGTTDGLRRGAPVQGTGEPIKVPVGTATLGRIMNVLGDAIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERWSIHREAPSYEDQSNSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIAALGIYPAVDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGQEHYDTARGVQTLLQRYKELKD 374
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 144/336 (42%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L +G T + ++PVG LGRI+N G+ ID + R ++ +
Sbjct: 55 AIALGTTDGLRRGAPVQGTGEPIKVPVGTATLGRIMNVLGDAIDEAGPIGEEERWSIHRE 114
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP D+ + E L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 115 APSYEDQSNSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 174
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++ N +D +V + + TG T+ E FRD
Sbjct: 175 YSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRD 234
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L D++ ++ A ++S LL R P + L E + +
Sbjct: 235 EGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------Q 281
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L ++ PA++ S
Sbjct: 282 ERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIAALGIYPAVDPLDS 341
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y + ++ +L +Y+EL+
Sbjct: 342 TSRQLDPLVIGQEHYDTARG----VQTLLQRYKELK 373
>gi|308238031|emb|CBK55606.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
Length = 419
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 235/343 (68%), Positives = 284/343 (82%), Gaps = 1/343 (0%)
Query: 570 IINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILN 629
I+ NN++I +VQ Q+G+ + R IA G++ G+KR V TG PI PVG TLGRI+N
Sbjct: 13 IVVDANNLTI-EVQAQLGDGVARGIAMGSSEGLKRGLAVTRTGAPISVPVGHATLGRIMN 71
Query: 630 VLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFG 689
VLG+P+D KG + ++ + IH P F + +LETGIKVIDL+CPF KGGK+GLFG
Sbjct: 72 VLGEPVDGKGPVQTEDRQAIHRPAPAFDELAASTEVLETGIKVIDLVCPFAKGGKVGLFG 131
Query: 690 GAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQM 749
GAGVGKTV MMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S VLDKV+L+YGQM
Sbjct: 132 GAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVLDKVALVYGQM 191
Query: 750 NEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQP 809
NEP GNRLR LTGL++AE FR+ G+D+L+FIDNI+R+TLAGTEVSA+LGR PSAVGYQP
Sbjct: 192 NEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLGRMPSAVGYQP 251
Query: 810 TLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELG 869
TLAEEMG+LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELG
Sbjct: 252 TLAEEMGQLQERITSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELG 311
Query: 870 IYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IYPA+DPL+S+S+QLDP IVG+EHY VA + LQ+YKEL+D
Sbjct: 312 IYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQD 354
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 145/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI+N GE +D K ++R+ + + AP +
Sbjct: 42 EGLKRGLAVTRTGAPISVPVGHATLGRIMNVLGEPVDGKGPVQTEDRQAIHRPAPAFDEL 101
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ E L TGIK ID + P KG + + G GKT + ++ I N ++ ++ +
Sbjct: 102 AASTEVLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGV 161
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ +D +V + + + TG T+ E+FRD G+D L+
Sbjct: 162 GERTREGNDFYHEMTDSGVLDKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILM 221
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E ++ +++I +
Sbjct: 222 FIDNIFRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGQL------QERITSTK 268
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 269 VGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPALDPLDSFSRQLDP 328
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + + L +Y+EL+
Sbjct: 329 QIVGQEHYDVARS----CQKTLQRYKELQ 353
>gi|308238035|emb|CBK55608.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
gi|308238041|emb|CBK55611.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
Length = 419
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 235/343 (68%), Positives = 285/343 (83%), Gaps = 1/343 (0%)
Query: 570 IINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILN 629
I+ +NN++I +VQ Q+G+ + R IA G++ G+KR V TG PI PVG TLGRI+N
Sbjct: 13 IVVDENNLTI-EVQAQLGDGVARGIAMGSSEGLKRGLAVTRTGAPISVPVGHATLGRIMN 71
Query: 630 VLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFG 689
VLG+P+D KG + ++ + IH P F + +LETGIKVIDL+CPF KGGK+GLFG
Sbjct: 72 VLGEPVDGKGPVQTEDRQAIHRPAPAFDELAASTEVLETGIKVIDLVCPFAKGGKVGLFG 131
Query: 690 GAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQM 749
GAGVGKTV MMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S VLDKV+L+YGQM
Sbjct: 132 GAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVLDKVALVYGQM 191
Query: 750 NEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQP 809
NEP GNRLR LTGL++AE FR+ G+D+L+FIDNI+R+TLAGTEVSA+LGR PSAVGYQP
Sbjct: 192 NEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLGRMPSAVGYQP 251
Query: 810 TLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELG 869
TLAEEMG+LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELG
Sbjct: 252 TLAEEMGQLQERITSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELG 311
Query: 870 IYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IYPA+DPL+S+S+QLDP IVG+EHY VA + LQ+YKEL+D
Sbjct: 312 IYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQD 354
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 145/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI+N GE +D K ++R+ + + AP +
Sbjct: 42 EGLKRGLAVTRTGAPISVPVGHATLGRIMNVLGEPVDGKGPVQTEDRQAIHRPAPAFDEL 101
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ E L TGIK ID + P KG + + G GKT + ++ I N ++ ++ +
Sbjct: 102 AASTEVLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGV 161
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ +D +V + + + TG T+ E+FRD G+D L+
Sbjct: 162 GERTREGNDFYHEMTDSGVLDKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILM 221
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E ++ +++I +
Sbjct: 222 FIDNIFRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGQL------QERITSTK 268
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 269 VGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPALDPLDSFSRQLDP 328
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + + L +Y+EL+
Sbjct: 329 QIVGQEHYDVARS----CQKTLQRYKELQ 353
>gi|112791366|gb|ABI21953.1| ATP synthase beta subunit, partial [Dickeya paradisiaca]
Length = 421
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G++R VV+ PI PVG TLGRI+NVLGDP+D KG
Sbjct: 17 EVQQQLGGGVVRCIAMGSSDGLRRGLSVVNLEHPIEVPVGKATLGRIMNVLGDPVDMKGP 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWSIHRAAPSYEDLSNSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+ LSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N G+ +D K + R ++ + AP D
Sbjct: 37 GLRRGLSVVNLEHPIEVPVGKATLGRIMNVLGDPVDMKGPIGEEERWSIHRAAPSYEDLS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 217 VDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDVARG----VQSILQRYQELK 347
>gi|392547715|ref|ZP_10294852.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas rubra ATCC 29570]
Length = 461
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+T+G++R T V T +PI PVG TLGRI+NVLGD ID G
Sbjct: 43 EVQQQLGGGVVRGIALGSTDGLRRGTSVEGTAEPIKVPVGTATLGRIMNVLGDAIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERWSIHRAAPSYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RIASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G EHY+ A V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGNEHYETARGVQTVLQRYKELKD 374
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T + ++PVG LGRI+N G+ ID + R ++ + AP ++
Sbjct: 63 GLRRGTSVEGTAEPIKVPVGTATLGRIMNVLGDAIDEAGPIGEEERWSIHRAAPSYEEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 123 SSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 183 ERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 243 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERIASTKT 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPL 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 350 VIGNEHYETARG----VQTVLQRYKELK 373
>gi|308238033|emb|CBK55607.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
Length = 420
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 235/343 (68%), Positives = 284/343 (82%), Gaps = 1/343 (0%)
Query: 570 IINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILN 629
I+ NN++I +VQ Q+G+ + R IA G++ G+KR V TG PI PVG TLGRI+N
Sbjct: 13 IVVDANNLTI-EVQAQLGDGVARGIAMGSSEGLKRGLAVTRTGAPISVPVGHATLGRIMN 71
Query: 630 VLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFG 689
VLG+P+D KG + ++ + IH P F + +LETGIKVIDL+CPF KGGK+GLFG
Sbjct: 72 VLGEPVDGKGPVQTEDRQAIHRPAPAFDELAASTEVLETGIKVIDLVCPFAKGGKVGLFG 131
Query: 690 GAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQM 749
GAGVGKTV MMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S VLDKV+L+YGQM
Sbjct: 132 GAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVLDKVALVYGQM 191
Query: 750 NEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQP 809
NEP GNRLR LTGL++AE FR+ G+D+L+FIDNI+R+TLAGTEVSA+LGR PSAVGYQP
Sbjct: 192 NEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLGRMPSAVGYQP 251
Query: 810 TLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELG 869
TLAEEMG+LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELG
Sbjct: 252 TLAEEMGQLQERITSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELG 311
Query: 870 IYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IYPA+DPL+S+S+QLDP IVG+EHY VA + LQ+YKEL+D
Sbjct: 312 IYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQD 354
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 145/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI+N GE +D K ++R+ + + AP +
Sbjct: 42 EGLKRGLAVTRTGAPISVPVGHATLGRIMNVLGEPVDGKGPVQTEDRQAIHRPAPAFDEL 101
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ E L TGIK ID + P KG + + G GKT + ++ I N ++ ++ +
Sbjct: 102 AASTEVLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGV 161
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ +D +V + + + TG T+ E+FRD G+D L+
Sbjct: 162 GERTREGNDFYHEMTDSGVLDKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILM 221
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E ++ +++I +
Sbjct: 222 FIDNIFRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGQL------QERITSTK 268
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 269 VGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPALDPLDSFSRQLDP 328
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + + L +Y+EL+
Sbjct: 329 QIVGQEHYDVARS----CQKTLQRYKELQ 353
>gi|34500000|gb|AAQ73582.1| ATP synthase beta subunit [Mannheimia haemolytica]
Length = 444
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/356 (67%), Positives = 293/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G+++G+KR V +T K I
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGSSDGLKRGLKVENTNKAIE 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID G I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEAGPIGEEERWTIHRAAPSYEEQANSTXLLETGIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
PF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 APFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKD 370
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 145/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T K E+PVG + LGRI+N GE ID + R T+ + AP ++
Sbjct: 59 GLKRGLKVENTNKAIEVPVGTKTLGRIMNVLGEPIDEAGPIGEEERWTIHRAAPSYEEQA 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTXLLETGIKVIDLVAPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G L +Y+EL+
Sbjct: 346 VVGEEHYNVARGVQG----TLQRYKELK 369
>gi|385874254|gb|AFI92774.1| ATP synthase subunit beta [Pectobacterium sp. SCC3193]
Length = 460
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/361 (66%), Positives = 293/361 (81%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + + K + + ++N + +VQQQ+G IVR IA G+++G++R V +
Sbjct: 13 VVDVEFPQDAVPKVYDALEVENGAEKLVLEVQQQLGGGIVRCIAMGSSDGLRRGLNVNNL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
PI PVG TLGRI+NVLGDPID KG+I +++ IH P + + LETGIK
Sbjct: 73 DHPIEVPVGKATLGRIMNVLGDPIDMKGDIGEEERWAIHRAAPSYEELSNSQEPLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
VIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM +SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAG
Sbjct: 193 EMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 138/314 (43%), Gaps = 23/314 (7%)
Query: 190 FEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSID 249
E+PVG LGRI+N G+ ID K + R + + AP + + EPL TGIK ID
Sbjct: 76 IEVPVGKATLGRIMNVLGDPIDMKGDIGEEERWAIHRAAPSYEELSNSQEPLETGIKVID 135
Query: 250 SMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLK 308
M P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 136 LMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMT 195
Query: 309 YYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQI 368
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++
Sbjct: 196 DSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEV 255
Query: 369 SLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEG 428
S LL R P + L E + +++I + G++T+ +
Sbjct: 256 SALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPAD 302
Query: 429 DVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLS 483
D+T P + D + L + + PA++ S SR V G Y + +
Sbjct: 303 DLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARG-- 360
Query: 484 GDIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 361 --VQSILQRYQELK 372
>gi|291333876|gb|ADD93557.1| F0F1 ATP synthase subunit beta [uncultured marine bacterium
MedDCM-OCT-S04-C293]
Length = 459
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 240/356 (67%), Positives = 291/356 (81%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + + ++ + +VQQQ+G+ IVRTIA G T G++R V +TG +
Sbjct: 16 VEFSRQELPKIYDALEVEGEGLVLEVQQQLGDGIVRTIAMGQTEGLQRGAKVSNTGGAVK 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG+ TLGRILNVLG+PID KG++ ++++ PIH PP + +Q ++ ILETGIKVIDL+
Sbjct: 76 VPVGEKTLGRILNVLGEPIDGKGDVGAEEQMPIHRAPPSYEDQAESSEILETGIKVIDLM 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIA E G SVF GVGER+REGNDFY EM ES
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAYETSGYSVFAGVGERTREGNDFYLEMTES 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
VLDKV+L+YGQMNEP G R+RVAL+GL+IAE+FR+ GKDVLLF+DNIYR+TLAG E S+
Sbjct: 196 QVLDKVALVYGQMNEPPGCRMRVALSGLTIAEKFRDEGKDVLLFVDNIYRYTLAGVECSS 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQAIYVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAIYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSRQIA LGIYPA+DPL+S S+QLDP IVG+EHY VA V+ LQ+Y ELKD
Sbjct: 316 ATVVLSRQIASLGIYPAVDPLDSTSRQLDPAIVGQEHYDVAKGVQQVLQRYLELKD 371
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 141/329 (42%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G K T ++PVG + LGRI+N GE ID K + + + + P D+
Sbjct: 59 EGLQRGAKVSNTGGAVKVPVGEKTLGRILNVLGEPIDGKGDVGAEEQMPIHRAPPSYEDQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+E L TGIK ID M P KG + + G GKT ++ I N + ++ +
Sbjct: 119 AESSEILETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAYETSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + ++ +D +V + + +G TI E FRD G+D L+
Sbjct: 179 GERTREGNDFYLEMTESQVLDKVALVYGQMNEPPGCRMRVALSGLTIAEKFRDEGKDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A + S LL R P V Y L E + +++I +
Sbjct: 239 FVDNIYRYTLAGVECSSLLGR------MPSAVGY-QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ I D+T P + D + L + + PA++ S SR
Sbjct: 286 TGSITSVQAIYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + K ++ +L +Y EL+
Sbjct: 346 AIVGQEHYDVAKG----VQQVLQRYLELK 370
>gi|253690617|ref|YP_003019807.1| ATP synthase F1 subunit beta [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259585447|sp|C6DJH2.1|ATPB_PECCP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|251757195|gb|ACT15271.1| ATP synthase F1, beta subunit [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 460
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 240/361 (66%), Positives = 294/361 (81%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + + K + + ++N + +VQQQ+G IVR IA G+++G++R V +
Sbjct: 13 VVDVEFPQDAVPKVYDALEVENGAEKLVLEVQQQLGGGIVRCIAMGSSDGLRRGLNVNNL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
PI PVG TLGRI+NVLG+PID KG+I +++ IH P + + +LETGIK
Sbjct: 73 DHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEERWAIHRAAPSYEELSNSQELLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
VIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM +SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAG
Sbjct: 193 EMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 137/314 (43%), Gaps = 23/314 (7%)
Query: 190 FEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSID 249
E+PVG LGRI+N GE ID K + R + + AP + + E L TGIK ID
Sbjct: 76 IEVPVGKATLGRIMNVLGEPIDMKGDIGEEERWAIHRAAPSYEELSNSQELLETGIKVID 135
Query: 250 SMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLK 308
M P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 136 LMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMT 195
Query: 309 YYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQI 368
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++
Sbjct: 196 DSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEV 255
Query: 369 SLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEG 428
S LL R P + L E + +++I + G++T+ +
Sbjct: 256 SALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPAD 302
Query: 429 DVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLS 483
D+T P + D + L + + PA++ S SR V G Y + +
Sbjct: 303 DLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARG-- 360
Query: 484 GDIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 361 --VQSILQRYQELK 372
>gi|410629299|ref|ZP_11340003.1| F-type H+-transporting ATPase subunit beta [Glaciecola mesophila
KMM 241]
gi|410151095|dbj|GAC26772.1| F-type H+-transporting ATPase subunit beta [Glaciecola mesophila
KMM 241]
Length = 461
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G+T+G++R V ++G+ I PVG TLGRI++VLG+PID G
Sbjct: 43 EVQQQLGGGVVRTIAMGSTDGLRRGLAVENSGEGIQVPVGKATLGRIMDVLGNPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERMSIHRAAPTYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RIASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGQEHYDTARGVQSVLQRYKELKD 374
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 137/313 (43%), Gaps = 23/313 (7%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDS 250
++PVG LGRI++ G ID + R ++ + AP ++ S E L TGIK ID
Sbjct: 78 QVPVGKATLGRIMDVLGNPIDEAGPIGEEERMSIHRAAPTYEEQSSSVELLETGIKVIDL 137
Query: 251 MIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKY 309
+ P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 138 VCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNE 197
Query: 310 YNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQIS 369
N +D +V + + TG T+ E FRD G+D L D++ ++ A ++S
Sbjct: 198 SNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVS 257
Query: 370 LLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGD 429
LL R P V Y L E + +++I + G++T+ + D
Sbjct: 258 ALLGR------MPSAVGY-QPTLAEEMGVL------QERIASTKTGSITSIQAVYVPADD 304
Query: 430 VTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSG 484
+T P + D + L ++ + PA++ S SR V G Y +
Sbjct: 305 LTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDTARG--- 361
Query: 485 DIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 362 -VQSVLQRYKELK 373
>gi|171462853|ref|YP_001796966.1| F0F1 ATP synthase subunit beta [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|226740659|sp|B1XSD4.1|ATPB_POLNS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|171192391|gb|ACB43352.1| ATP synthase F1, beta subunit [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 466
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQIG+ +VR IA G ++G++R V TGKPI PVG TLGRI++VLG PID+ G
Sbjct: 48 EVQQQIGDGVVRAIAMGASDGLRRGMEVKSTGKPISVPVGPATLGRIMDVLGRPIDDAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++++ IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IATEERRAIHQPAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMKESNV+DKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKESNVIDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LTGLTMAEAFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G++TS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKTGSVTSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY+VA +V+ LQ+YKEL+D
Sbjct: 348 SRQLDPQVVGQEHYEVARDVQMTLQRYKELRD 379
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 147/335 (43%), Gaps = 23/335 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L +G + T K +PVG LGRI++ G ID+ + R + +
Sbjct: 60 AIAMGASDGLRRGMEVKSTGKPISVPVGPATLGRIMDVLGRPIDDAGPIATEERRAIHQP 119
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP + + L TGIK ID + P KG + + G GKT ++ I N K +
Sbjct: 120 APKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSG 179
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
+ ++ +G++ + +++K N +D +V + + TG T+ E FRD
Sbjct: 180 LSVFAGVGERTREGNDFYHEMKESNVIDKVAMVFGQMNEPPGNRLRVALTGLTMAEAFRD 239
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L D++ ++ A ++S LL R P V Y L E K+ +
Sbjct: 240 EGRDILFFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------Q 286
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P D + L ++ PA++ S
Sbjct: 287 ERITSTKTGSVTSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDS 346
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
SR V G Y++ + D+++ L +Y+EL
Sbjct: 347 TSRQLDPQVVGQEHYEVAR----DVQMTLQRYKEL 377
>gi|126176547|ref|YP_001052696.1| F0F1 ATP synthase subunit beta [Shewanella baltica OS155]
gi|153002861|ref|YP_001368542.1| F0F1 ATP synthase subunit beta [Shewanella baltica OS185]
gi|160877608|ref|YP_001556924.1| F0F1 ATP synthase subunit beta [Shewanella baltica OS195]
gi|217975448|ref|YP_002360199.1| F0F1 ATP synthase subunit beta [Shewanella baltica OS223]
gi|373951705|ref|ZP_09611666.1| ATP synthase subunit beta [Shewanella baltica OS183]
gi|378710817|ref|YP_005275711.1| ATP synthase F1 subunit beta [Shewanella baltica OS678]
gi|386326700|ref|YP_006022817.1| ATP synthase subunit beta [Shewanella baltica BA175]
gi|386343294|ref|YP_006039660.1| ATP synthase subunit beta [Shewanella baltica OS117]
gi|418022924|ref|ZP_12661910.1| ATP synthase subunit beta [Shewanella baltica OS625]
gi|166222413|sp|A3DAR4.1|ATPB_SHEB5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|166222414|sp|A6WUJ0.1|ATPB_SHEB8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|189081344|sp|A9KX06.1|ATPB_SHEB9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|254808163|sp|B8EDV0.1|ATPB_SHEB2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|125999752|gb|ABN63827.1| ATP synthase F1, beta subunit [Shewanella baltica OS155]
gi|151367479|gb|ABS10479.1| ATP synthase F1, beta subunit [Shewanella baltica OS185]
gi|160863130|gb|ABX51664.1| ATP synthase F1, beta subunit [Shewanella baltica OS195]
gi|217500583|gb|ACK48776.1| ATP synthase F1, beta subunit [Shewanella baltica OS223]
gi|315269806|gb|ADT96659.1| ATP synthase F1, beta subunit [Shewanella baltica OS678]
gi|333820845|gb|AEG13511.1| ATP synthase subunit beta [Shewanella baltica BA175]
gi|334865695|gb|AEH16166.1| ATP synthase subunit beta [Shewanella baltica OS117]
gi|353537926|gb|EHC07482.1| ATP synthase subunit beta [Shewanella baltica OS625]
gi|373888305|gb|EHQ17197.1| ATP synthase subunit beta [Shewanella baltica OS183]
Length = 463
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G+++G++R VV++G PI PVG TLGRI+NVLG+PID G
Sbjct: 44 EVQQQLGGGVVRTIAMGSSDGLRRGLEVVNSGSPITVPVGTATLGRIMNVLGEPIDEAGP 103
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 104 IGEEERYVIHRTAPSYEDQSSSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 163
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFY+EMK+S VLDKV+++YGQMNEP GNRLRVA
Sbjct: 164 ELINNIAKAHSGLSVFAGVGERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVA 223
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
L+GL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 224 LSGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 283
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 284 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 343
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VAN V+ LQ+YKELKD
Sbjct: 344 SRQLDPLVVGQEHYDVANGVQTVLQRYKELKD 375
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 152/359 (42%), Gaps = 25/359 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + +PVG LGRI+N GE ID + R + + AP D+
Sbjct: 64 GLRRGLEVVNSGSPITVPVGTATLGRIMNVLGEPIDEAGPIGEEERYVIHRTAPSYEDQS 123
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 124 SSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 183
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + +G T+ E FRD G+D L+
Sbjct: 184 ERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALSGLTMAEKFRDEGRDVLLF 243
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 244 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 290
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 291 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 350
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQ 526
V G Y + + ++ +L +Y+EL+ +L KT ++ KI + Q
Sbjct: 351 VVGQEHYDV----ANGVQTVLQRYKELKDIIAILGMDELSDEDKTTVFRARKIERFLSQ 405
>gi|283787579|ref|YP_003367444.1| ATP synthase subunit beta [Citrobacter rodentium ICC168]
gi|282951033|emb|CBG90711.1| ATP synthase beta subunit [Citrobacter rodentium ICC168]
Length = 460
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVRTIA G+++G++R V D PI PVG TLGRI+NVLG+P+D KG+
Sbjct: 42 EVQQQLGGGIVRTIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGD 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRDAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PS+VGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSSVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDTARGVQSILQRYQELKD 373
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + E E+PVG LGRI+N GE +D K + R + + AP +
Sbjct: 62 GLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGDIGEEERWAIHRDAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSSVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDTARG----VQSILQRYQELK 372
>gi|167856121|ref|ZP_02478862.1| F0F1 ATP synthase subunit beta [Haemophilus parasuis 29755]
gi|167852762|gb|EDS24035.1| F0F1 ATP synthase subunit beta [Haemophilus parasuis 29755]
Length = 457
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/356 (67%), Positives = 292/356 (82%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + ++ +++ +VQQQ+G +VR IA G ++G+KR V +T K I
Sbjct: 16 VEFPQDAVPKVYDALKVETGLTL-EVQQQLGGGVVRCIALGTSDGLKRGLKVENTNKAIE 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID G I +++ IH P + +Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEAGPIGEEERWTIHRAAPSYEDQANSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
PF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 APFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPAIDPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRNIASLGIYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQKTLQRYKELKD 370
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 146/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T K E+PVG + LGRI+N GE ID + R T+ + AP D+
Sbjct: 59 GLKRGLKVENTNKAIEVPVGTKTLGRIMNVLGEPIDEAGPIGEEERWTIHRAAPSYEDQA 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLIAPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PAI+ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAIDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ L +Y+EL+
Sbjct: 346 VVGQEHYDVARG----VQKTLQRYKELK 369
>gi|410610845|ref|ZP_11321950.1| F-type H+-transporting ATPase subunit beta [Glaciecola psychrophila
170]
gi|410169556|dbj|GAC35839.1| F-type H+-transporting ATPase subunit beta [Glaciecola psychrophila
170]
Length = 461
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G+T+G++R V ++G+ I PVG TLGRI++VLG+PID G
Sbjct: 43 EVQQQLGGGVVRTIAMGSTDGLRRGLAVENSGEAIQVPVGIATLGRIMDVLGNPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERMSIHRAAPTYEEQSISIELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RIASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSS 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGQEHYDTARGVQSVLQRYKELKD 374
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 140/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + ++PVG LGRI++ G ID + R ++ + AP ++
Sbjct: 63 GLRRGLAVENSGEAIQVPVGIATLGRIMDVLGNPIDEAGPIGEEERMSIHRAAPTYEEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 123 ISIELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 183 ERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 243 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERIASTKT 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDPL 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 350 VIGQEHYDTARG----VQSVLQRYKELK 373
>gi|392543463|ref|ZP_10290600.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas piscicida JCM
20779]
Length = 461
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+T+G++R T V T +PI PVG TLGRI+NVLGD ID G
Sbjct: 43 EVQQQLGGGVVRGIALGSTDGLRRGTPVQGTAEPIKVPVGTATLGRIMNVLGDAIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERWSIHRAAPSYEDQSNSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RIASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPQVIGQEHYDTARGVQTILQRYKELKD 374
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T + ++PVG LGRI+N G+ ID + R ++ + AP D+
Sbjct: 63 GLRRGTPVQGTAEPIKVPVGTATLGRIMNVLGDAIDEAGPIGEEERWSIHRAAPSYEDQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 123 NSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 183 ERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 243 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERIASTKT 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPQ 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 350 VIGQEHYDTARG----VQTILQRYKELK 373
>gi|145588215|ref|YP_001154812.1| F0F1 ATP synthase subunit beta [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189081337|sp|A4SUT4.1|ATPB_POLSQ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|145046621|gb|ABP33248.1| ATP synthase F1 subcomplex beta subunit [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 466
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQIG+ +VR IA G ++G++R V TGKPI PVG TLGRI++VLG PID+ G
Sbjct: 48 EVQQQIGDGVVRAIAMGASDGLRRGMEVKSTGKPISVPVGPATLGRIMDVLGRPIDDAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++++ IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IATEERRAIHQPAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMKESNV+DKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKESNVIDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LTGLTMAEAFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G++TS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKTGSVTSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY+VA +V+ LQ+YKEL+D
Sbjct: 348 SRQLDPQVVGQEHYEVARDVQMTLQRYKELRD 379
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 147/335 (43%), Gaps = 23/335 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L +G + T K +PVG LGRI++ G ID+ + R + +
Sbjct: 60 AIAMGASDGLRRGMEVKSTGKPISVPVGPATLGRIMDVLGRPIDDAGPIATEERRAIHQP 119
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP + + L TGIK ID + P KG + + G GKT ++ I N K +
Sbjct: 120 APKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSG 179
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
+ ++ +G++ + +++K N +D +V + + TG T+ E FRD
Sbjct: 180 LSVFAGVGERTREGNDFYHEMKESNVIDKVAMVFGQMNEPPGNRLRVALTGLTMAEAFRD 239
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L D++ ++ A ++S LL R P V Y L E K+ +
Sbjct: 240 EGRDILFFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------Q 286
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P D + L ++ PA++ S
Sbjct: 287 ERITSTKTGSVTSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDS 346
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
SR V G Y++ + D+++ L +Y+EL
Sbjct: 347 TSRQLDPQVVGQEHYEVAR----DVQMTLQRYKEL 377
>gi|424863801|ref|ZP_18287713.1| ATP synthase F1, beta subunit [SAR86 cluster bacterium SAR86A]
gi|400757122|gb|EJP71334.1| ATP synthase F1, beta subunit [SAR86 cluster bacterium SAR86A]
Length = 465
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 240/363 (66%), Positives = 295/363 (81%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + NI K + + + + + +VQQQ+G+ +VRTIA G T G+KR T PI
Sbjct: 16 VEFDKDNIPKVYEALMVDESGTTLEVQQQLGDGVVRTIAMGATEGLKRGLSASRTNAPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG+PID KG I K K PIH PP +++Q ++ +LETGIKVIDL+
Sbjct: 76 VPVGPETLGRIVDVLGNPIDEKGPIGEKSKMPIHRKPPTYTDQSASSEVLETGIKVIDLM 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGKIGLFGGAGVGKTVNMMELI NIA++H G SVF GVGER+REGNDFY+EM+ES
Sbjct: 136 CPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYYEMQES 195
Query: 737 NVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
V++ KV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLFIDNIYR+TL
Sbjct: 196 GVVNIDNLGESKVAMVYGQMNEPPGNRLRVALTGLTMAESFRDEGKDVLLFIDNIYRYTL 255
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AG EVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+
Sbjct: 256 AGVEVSALLGRMPSAVGYQPTLAEEMGALQERITSTKTGSITSIQAVYVPADDLTDPSPA 315
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLD+T+VLSRQI+ELGIYPA+DPL+S S+QLDP++VG++HY+VA V+ LQ+Y E
Sbjct: 316 TTFAHLDATVVLSRQISELGIYPAVDPLDSTSRQLDPFVVGDDHYEVAQGVQKILQRYNE 375
Query: 910 LKD 912
LKD
Sbjct: 376 LKD 378
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 144/341 (42%), Gaps = 40/341 (11%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG E LGRIV+ G ID K K++ + + P D+
Sbjct: 59 EGLKRGLSASRTNAPISVPVGPETLGRIVDVLGNPIDEKGPIGEKSKMPIHRKPPTYTDQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ +E L TGIK ID M P KG + + G GKT ++ I N + + ++ +
Sbjct: 119 SASSEVLETGIKVIDLMCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGV 178
Query: 294 GQKI------------SSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIG 341
G++ S ++N+ N + M Y + + TG T+
Sbjct: 179 GERTREGNDFYYEMQESGVVNIDNLGESKVAMVY-----GQMNEPPGNRLRVALTGLTMA 233
Query: 342 EYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINK 401
E FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 234 ESFRDEGKDVLLFIDNIYRYTLAGVEVSALLGR------MPSAVGY-QPTLAEEMGAL-- 284
Query: 402 YFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAI 461
+++I + G++T+ + D+T P + D + L + PA+
Sbjct: 285 ----QERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQISELGIYPAV 340
Query: 462 NVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ S SR V G Y++ + ++ +L +Y EL+
Sbjct: 341 DPLDSTSRQLDPFVVGDDHYEVAQG----VQKILQRYNELK 377
>gi|114565195|ref|YP_752709.1| F0F1 ATP synthase subunit beta [Shewanella frigidimarina NCIMB 400]
gi|122298241|sp|Q07VU4.1|ATPB1_SHEFN RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
synthase F1 sector subunit beta 1; AltName:
Full=F-ATPase subunit beta 1
gi|114336488|gb|ABI73870.1| ATP synthase F1, beta subunit [Shewanella frigidimarina NCIMB 400]
gi|372285493|dbj|BAL45903.1| FoF1 ATP synthase beta subunit [Shewanella livingstonensis]
Length = 463
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G+++G++R V ++G PI PVG TLGRI+NVLG+PID G
Sbjct: 44 EVQQQLGGGVVRTIAMGSSDGLRRGLEVANSGSPITVPVGVATLGRIMNVLGEPIDEAGP 103
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 104 IGEEERYVIHRAAPSYEDQSNSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 163
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFY+EM++S VLDKV+++YGQMNEP GNRLRVA
Sbjct: 164 ELINNIAKAHSGLSVFAGVGERTREGNDFYYEMEDSGVLDKVAMVYGQMNEPPGNRLRVA 223
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGLSIAE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 224 LTGLSIAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 283
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK+G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 284 RITSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 343
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VAN V+ LQ+YKELKD
Sbjct: 344 SRQLDPQVVGQEHYDVANGVQTVLQRYKELKD 375
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 154/363 (42%), Gaps = 33/363 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + +PVG LGRI+N GE ID + R + + AP D+
Sbjct: 64 GLRRGLEVANSGSPITVPVGVATLGRIMNVLGEPIDEAGPIGEEERYVIHRAAPSYEDQS 123
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 124 NSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 183
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ +D +V + + TG +I E FRD G+D L+
Sbjct: 184 ERTREGNDFYYEMEDSGVLDKVAMVYGQMNEPPGNRLRVALTGLSIAEKFRDEGRDVLLF 243
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I + +
Sbjct: 244 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKS 290
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 291 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPQ 350
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE------SFSKFSSDLDIVTKTQLYNGEKISLL 523
V G Y + + ++ +L +Y+EL+ + S D KT ++ KI
Sbjct: 351 VVGQEHYDV----ANGVQTVLQRYKELKDIIAILGMDELSDD----DKTMVFRARKIERF 402
Query: 524 MKQ 526
+ Q
Sbjct: 403 LSQ 405
>gi|350570276|ref|ZP_08938643.1| ATP synthase F1 sector beta subunit [Neisseria wadsworthii 9715]
gi|349797256|gb|EGZ51024.1| ATP synthase F1 sector beta subunit [Neisseria wadsworthii 9715]
Length = 465
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/365 (66%), Positives = 290/365 (79%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + + L +N +VQQQ+G+ IVRTIA G+++G+KR V +TG
Sbjct: 13 VVDVEFPRDAIPRVYDALKLVDNDLTLEVQQQLGDGIVRTIAMGSSDGLKRGLAVANTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG+P+D G I S++ IH PKF ILETGIKVI
Sbjct: 73 PITVPVGKATLGRIMDVLGNPVDEAGPIGSEQTRAIHQPAPKFDELSSATEILETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGLS+AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLSMAEFFRDEKDESGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 152/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G +D + + + AP +
Sbjct: 60 GLKRGLAVANTGAPITVPVGKATLGRIMDVLGNPVDEAGPIGSEQTRAIHQPAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 SATEILETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG ++ E+FRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLSMAEFFRDEKDESGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|325981214|ref|YP_004293616.1| ATP synthase F1 subunit alpha [Nitrosomonas sp. AL212]
gi|325530733|gb|ADZ25454.1| ATP synthase F1, alpha subunit [Nitrosomonas sp. AL212]
Length = 513
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 233/404 (57%), Positives = 309/404 (76%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ +++ +G CT +I E+PVG LLGR+VN+ G+ ID K E +EKI
Sbjct: 73 AVIMGAYEHIREGDTVKCTGRILEVPVGEGLLGRVVNALGQPIDGKGPVTAARSEPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KS+DSM+PIG+GQRELIIGDRQTGKT +AID I+NQK ++++
Sbjct: 133 APGVIWRQSVDQPVQTGLKSVDSMVPIGRGQRELIIGDRQTGKTAVAIDAILNQKGQDML 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK SS+ NV+ KL+ + M+YT+VVAATA++SAA Q+I+PY+GCT+GEYFRD
Sbjct: 193 CIYVAVGQKASSIANVVRKLEEHGAMEYTIVVAATASESAAMQFIAPYSGCTMGEYFRDK 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
GQD LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER+++++ ++EK
Sbjct: 253 GQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVSAAYVEKA 312
Query: 408 K--IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDVT+F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TNGAVKGKTGSLTALPIIETQAGDVTAFVPTNVISITDGQIFLETDLFNAGIRPAINAGV 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKL G IR+ LAQYREL +F++F+SDLD T+ QL G+ + LMK
Sbjct: 373 SVSRVGGAAQTKVIKKLGGGIRLALAQYRELAAFAQFASDLDEATRKQLERGKMATELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q + S+ E+ + L I N +F + + + FE + Y R
Sbjct: 433 QPQYATLSVSEMALTLFAINNGYFDDVEVARALAFESALKSYIR 476
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 154/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I+ V TG+ + PVG+ LGR++N LG PID KG + + + PI
Sbjct: 71 VGAVIMGAYEHIREGDTVKCTGRILEVPVGEGLLGRVVNALGQPIDGKGPVTAARSEPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K +D + P +G + + G GKT ++ I N +
Sbjct: 131 KIAPGVIWRQSVDQPVQTGLKSVDSMVPIGRGQRELIIGDRQTGKTAVAIDAILNQKGQD 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ VG+++ + +++E ++ ++ +E + + +G ++ E F
Sbjct: 191 MLC-IYVAVGQKASSIANVVRKLEEHGAMEYTIVVAATASESAAMQFIAPYSGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 250 RDKGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVSAAYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D+T P+ + D I L + GI PAI+
Sbjct: 310 EKATNGAVKGKTGSLTALPIIETQAGDVTAFVPTNVISITDGQIFLETDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G KV + ++ L +Y+EL
Sbjct: 370 AGVSVSR-----VGGAAQTKVIKKLGGGIRLALAQYREL 403
>gi|112791384|gb|ABI21962.1| ATP synthase beta subunit, partial [Pectobacterium carotovorum
subsp. odoriferum]
Length = 421
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVR IA G+++G++R V + PI PVG TLGRI+NVLGDPID KG+
Sbjct: 17 EVQQQLGGGIVRCIAMGSSDGLRRGLNVNNLDHPIEVPVGKATLGRIMNVLGDPIDMKGD 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRSAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 137/313 (43%), Gaps = 23/313 (7%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDS 250
E+PVG LGRI+N G+ ID K + R + + AP + + E L TGIK ID
Sbjct: 52 EVPVGKATLGRIMNVLGDPIDMKGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVIDL 111
Query: 251 MIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKY 309
M P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 112 MCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTD 171
Query: 310 YNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQIS 369
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++S
Sbjct: 172 SNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVS 231
Query: 370 LLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGD 429
LL R P + L E + +++I + G++T+ + D
Sbjct: 232 ALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPADD 278
Query: 430 VTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSG 484
+T P + D + L + + PA++ S SR V G Y + +
Sbjct: 279 LTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARG--- 335
Query: 485 DIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 336 -VQSILQRYQELK 347
>gi|384228043|ref|YP_005619778.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. Ua
(Uroleucon ambrosiae)]
gi|345538976|gb|AEO07843.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. Ua
(Uroleucon ambrosiae)]
Length = 465
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 247/363 (68%), Positives = 292/363 (80%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + + K + + +K S I +VQQQ+G +VRTIA G+++G+KR IV D G
Sbjct: 16 VEFNQDAVPKIYNALEVKKKHSNLILEVQQQLGSGVVRTIAMGSSDGLKRGLIVTDLGHY 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPI-----HTLPPKFSNQIFNNNILETG 669
I PVG TLGRI+NVLG+ IDNKG + +K S I H PP + + ILETG
Sbjct: 76 IKVPVGKVTLGRIMNVLGETIDNKGVLKNKNGSEIEYWEIHRAPPSYQERTSTKEILETG 135
Query: 670 IKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDF 729
IKVIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIA+EH G SVF GVGER+REGNDF
Sbjct: 136 IKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIALEHSGYSVFTGVGERTREGNDF 195
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
YHEM+ S VLDKV+L+YGQMNEP GNRLRVA TGL+IAE+FR++GKDVLLFIDNIYR+TL
Sbjct: 196 YHEMQTSKVLDKVALVYGQMNEPPGNRLRVAFTGLTIAEKFRDTGKDVLLFIDNIYRYTL 255
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AGTEVSA+LGR PSAVGYQPTLAEEMG QERI+ST+ G+ITS+QA+YVPADDLTDPSP+
Sbjct: 256 AGTEVSALLGRMPSAVGYQPTLAEEMGLFQERITSTQKGSITSIQAVYVPADDLTDPSPA 315
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLDST+ LSRQIA LGIYPAIDPL S S+QLDPYIVG+EHY+ A V+ LQ+Y+E
Sbjct: 316 TTFAHLDSTVTLSRQIASLGIYPAIDPLNSTSRQLDPYIVGDEHYETALGVQSILQRYEE 375
Query: 910 LKD 912
LKD
Sbjct: 376 LKD 378
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 126/285 (44%), Gaps = 19/285 (6%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVE-----KIAPGIMDRESVNEPLLTGI 245
++PVG LGRI+N GE IDNK KN +E + P +R S E L TGI
Sbjct: 77 KVPVGKVTLGRIMNVLGETIDNKGVLKNKNGSEIEYWEIHRAPPSYQERTSTKEILETGI 136
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID + P KG + + G GKT ++ I N + ++ +G++ +
Sbjct: 137 KVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIALEHSGYSVFTGVGERTREGNDFY 196
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
++++ +D +V + + +TG TI E FRD G+D L+ D++ ++ A
Sbjct: 197 HEMQTSKVLDKVALVYGQMNEPPGNRLRVAFTGLTIAEKFRDTGKDVLLFIDNIYRYTLA 256
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P + + + + L +++I + G++T+ +
Sbjct: 257 GTEVSALLGRMPSAVGY-------------QPTLAEEMGLFQERITSTQKGSITSIQAVY 303
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
D+T P + D + L + + PAI+ S SR
Sbjct: 304 VPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAIDPLNSTSR 348
>gi|112791382|gb|ABI21961.1| ATP synthase beta subunit, partial [Pectobacterium carotovorum]
Length = 421
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVR IA G+++G++R V + PI PVG TLGRI+NVLGDPID KG+
Sbjct: 17 EVQQQLGGGIVRCIAMGSSDGLRRGLNVNNLNHPIEVPVGKATLGRIMNVLGDPIDMKGD 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRSAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 137/313 (43%), Gaps = 23/313 (7%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDS 250
E+PVG LGRI+N G+ ID K + R + + AP + + E L TGIK ID
Sbjct: 52 EVPVGKATLGRIMNVLGDPIDMKGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVIDL 111
Query: 251 MIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKY 309
M P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 112 MCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTD 171
Query: 310 YNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQIS 369
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++S
Sbjct: 172 SNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVS 231
Query: 370 LLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGD 429
LL R P + L E + +++I + G++T+ + D
Sbjct: 232 ALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPADD 278
Query: 430 VTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSG 484
+T P + D + L + + PA++ S SR V G Y + +
Sbjct: 279 LTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARG--- 335
Query: 485 DIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 336 -VQSILQRYQELK 347
>gi|257095876|ref|YP_003169517.1| ATP synthase F1 subunit beta [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257048400|gb|ACV37588.1| ATP synthase F1, beta subunit [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 466
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G+++G++R V +TG I PVG+ T+GRI+NVLG PID G
Sbjct: 48 EVQQQLGDGIVRTIAMGSSDGLRRGMKVNNTGAGISVPVGNATIGRIMNVLGRPIDEAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++++ IH L PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IATEERREIHQLAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMKESNVLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKESNVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQE
Sbjct: 228 LTGLTMAERFRDDGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIASLGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY VA V+ LQKYKEL+D
Sbjct: 348 SRQLDPQVVGEEHYGVARAVQMTLQKYKELRD 379
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 153/370 (41%), Gaps = 29/370 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T +PVG +GRI+N G ID + R + ++AP +
Sbjct: 68 GLRRGMKVNNTGAGISVPVGNATIGRIMNVLGRPIDEAGPIATEERREIHQLAPKFDELS 127
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 128 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 187
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 188 ERTREGNDFYHEMKESNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDDGRDILFF 247
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + RL ER I +
Sbjct: 248 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKV 294
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 295 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQ 354
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y + + +++ L +Y+EL +L K +Y KI + Q
Sbjct: 355 VVGEEHYGVARA----VQMTLQKYKELRDIIAILGMDELSPEDKLAVYRARKIQRFLSQP 410
Query: 528 PHENYSIVEL 537
+S+ E+
Sbjct: 411 ----FSVAEV 416
>gi|294143106|ref|YP_003559084.1| ATP synthase F1 subunit beta [Shewanella violacea DSS12]
gi|293329575|dbj|BAJ04306.1| ATP synthase F1, beta subunit [Shewanella violacea DSS12]
Length = 458
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/359 (66%), Positives = 290/359 (80%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + + + + + +K+ + +VQQQIG +VRTIA G+++G++R V +TG
Sbjct: 13 VVDVEFPQDAVPQIYDALEIKSEGLVLEVQQQIGGGVVRTIAMGSSDGLRRGLEVTNTGS 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI+NVLG+PID G I IH P F +Q + +LETGIKVI
Sbjct: 73 PITVPVGSVTLGRIMNVLGEPIDEAGPIGGTDHYVIHREAPTFEDQSSSTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFY+EM
Sbjct: 133 DLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYYEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTE 793
K++ VLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVL F+DNIYR+TLAGTE
Sbjct: 193 KDAGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGKDVLFFVDNIYRYTLAGTE 252
Query: 794 VSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFT 853
VSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITSVQA+YVPADDLTDPSP+TTF
Sbjct: 253 VSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSVQAVYVPADDLTDPSPATTFA 312
Query: 854 HLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+TIVLSR IA +GIYPA+DPL+S S+QLDP +VG+EHY VAN V+ LQ+YKELKD
Sbjct: 313 HLDATIVLSRNIASMGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKD 371
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG LGRI+N GE ID + + + AP D+
Sbjct: 60 GLRRGLEVTNTGSPITVPVGSVTLGRIMNVLGEPIDEAGPIGGTDHYVIHREAPTFEDQS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 SSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + TG T+ E FRD G+D L
Sbjct: 180 ERTREGNDFYYEMKDAGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGKDVLFF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I + +
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKS 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D I L N+ + PA++ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPSPATTFAHLDATIVLSRNIASMGIYPAVDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 347 VVGQEHYDV----ANGVQTVLQRYKELK 370
>gi|56461719|ref|YP_157000.1| ATP synthase F0F1 subunit beta [Idiomarina loihiensis L2TR]
gi|81600226|sp|Q5QZI6.1|ATPB_IDILO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|56180729|gb|AAV83451.1| F0F1-type ATP synthase, beta subunit [Idiomarina loihiensis L2TR]
Length = 461
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G IVR IA G T+G++R +TG+ I+ PVG TLGRI++VLG+PID G
Sbjct: 43 EVQQQLGGGIVRAIAMGTTDGLRRGITAKNTGESIMVPVGKKTLGRIMDVLGNPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++K IH P + Q N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEEKMSIHRAAPSYEEQSNTNELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL+IAE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTIAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VL+R IA LGIYPA+DPL+S
Sbjct: 283 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRDIASLGIYPAVDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPQVIGDEHYDTAMGVQEVLQRYKELKD 374
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 14/303 (4%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L +G T + +PVG + LGRI++ G ID + + ++ +
Sbjct: 55 AIAMGTTDGLRRGITAKNTGESIMVPVGKKTLGRIMDVLGNPIDEAGPIGEEEKMSIHRA 114
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP ++ + NE L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 115 APSYEEQSNTNELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 174
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++ N +D +V + + TG TI E FRD
Sbjct: 175 YSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRD 234
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L D++ ++ A ++S LL R P + L E + +
Sbjct: 235 EGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------Q 281
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L+ ++ + PA++ S
Sbjct: 282 ERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRDIASLGIYPAVDPLDS 341
Query: 467 VSR 469
SR
Sbjct: 342 TSR 344
>gi|268593514|ref|ZP_06127735.1| ATP synthase F1, beta subunit [Providencia rettgeri DSM 1131]
gi|422006842|ref|ZP_16353830.1| F0F1 ATP synthase subunit beta [Providencia rettgeri Dmel1]
gi|291310937|gb|EFE51390.1| ATP synthase F1, beta subunit [Providencia rettgeri DSM 1131]
gi|414098033|gb|EKT59683.1| F0F1 ATP synthase subunit beta [Providencia rettgeri Dmel1]
Length = 460
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/345 (68%), Positives = 286/345 (82%), Gaps = 1/345 (0%)
Query: 568 FRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRI 627
++N K + + +VQQQ+G +VR IA G ++G+ R VV+ PI PVG TLGRI
Sbjct: 30 LEVVNGKEKLVL-EVQQQLGGGVVRCIAMGTSDGLSRGLEVVNLEHPIEVPVGKATLGRI 88
Query: 628 LNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGL 687
+NVLG PID KG+I +++ IH P + + +LETGIKV+DL+CPF KGGK+GL
Sbjct: 89 MNVLGQPIDMKGDIGEEERWSIHRAAPSYEELANSTELLETGIKVMDLICPFAKGGKVGL 148
Query: 688 FGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYG 747
FGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YG
Sbjct: 149 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 208
Query: 748 QMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY 807
QMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGY
Sbjct: 209 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGY 268
Query: 808 QPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAE 867
QPTLAEEMG LQERI+ST+ G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA
Sbjct: 269 QPTLAEEMGVLQERITSTQTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAS 328
Query: 868 LGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 329 LGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKD 373
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G + E E+PVG LGRI+N G+ ID K + R ++ + AP +
Sbjct: 62 GLSRGLEVVNLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWSIHRAAPSYEELA 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSTELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTQT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|397688922|ref|YP_006526241.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri DSM 10701]
gi|395810478|gb|AFN79883.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri DSM 10701]
Length = 458
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V +TG I PVG TLGRI+NVLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVNNTGTAIQVPVGAGTLGRIMNVLGEPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ ++ IH P +++Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 VACDEQWGIHRAAPSYADQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFYHEMK+SNVLDKV+++YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR GKDVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFREEGKDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+ LDP +VG+EHY+V V++ LQ+YKELKD
Sbjct: 340 SRSLDPLVVGQEHYEVTRGVQYVLQRYKELKD 371
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 146/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T ++PVG LGRI+N GE ID + + + AP D+
Sbjct: 59 EGLKRGLDVNNTGTAIQVPVGAGTLGRIMNVLGEPIDEAGPVACDEQWGIHRAAPSYADQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FR+ G+D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFREEGKDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FIDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 TGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRSLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y++ + ++ +L +Y+EL+
Sbjct: 346 LVVGQEHYEVTRG----VQYVLQRYKELK 370
>gi|308238027|emb|CBK55604.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
gi|308238037|emb|CBK55609.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
Length = 421
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 235/343 (68%), Positives = 285/343 (83%), Gaps = 1/343 (0%)
Query: 570 IINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILN 629
I+ +NN++I +VQ Q+G+ + R IA G++ G+KR V TG PI PVG TLGRI+N
Sbjct: 13 IVVDENNLTI-EVQAQLGDGVARGIAMGSSEGLKRGLAVTRTGAPISVPVGHATLGRIMN 71
Query: 630 VLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFG 689
VLG+P+D KG + ++ + IH P F + +LETGIKVIDL+CPF KGGK+GLFG
Sbjct: 72 VLGEPVDGKGPVQTEDRQAIHRPAPAFDELAASTEVLETGIKVIDLVCPFAKGGKVGLFG 131
Query: 690 GAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQM 749
GAGVGKTV MMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S VLDKV+L+YGQM
Sbjct: 132 GAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVLDKVALVYGQM 191
Query: 750 NEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQP 809
NEP GNRLR LTGL++AE FR+ G+D+L+FIDNI+R+TLAGTEVSA+LGR PSAVGYQP
Sbjct: 192 NEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLGRMPSAVGYQP 251
Query: 810 TLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELG 869
TLAEEMG+LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELG
Sbjct: 252 TLAEEMGQLQERITSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELG 311
Query: 870 IYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IYPA+DPL+S+S+QLDP IVG+EHY VA + LQ+YKEL+D
Sbjct: 312 IYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQD 354
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 145/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI+N GE +D K ++R+ + + AP +
Sbjct: 42 EGLKRGLAVTRTGAPISVPVGHATLGRIMNVLGEPVDGKGPVQTEDRQAIHRPAPAFDEL 101
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ E L TGIK ID + P KG + + G GKT + ++ I N ++ ++ +
Sbjct: 102 AASTEVLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGV 161
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ +D +V + + + TG T+ E+FRD G+D L+
Sbjct: 162 GERTREGNDFYHEMTDSGVLDKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILM 221
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E ++ +++I +
Sbjct: 222 FIDNIFRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGQL------QERITSTK 268
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 269 VGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPALDPLDSFSRQLDP 328
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + + L +Y+EL+
Sbjct: 329 QIVGQEHYDVARS----CQKTLQRYKELQ 353
>gi|149375664|ref|ZP_01893433.1| ATP synthase F1, beta subunit [Marinobacter algicola DG893]
gi|149360066|gb|EDM48521.1| ATP synthase F1, beta subunit [Marinobacter algicola DG893]
Length = 464
Score = 507 bits (1306), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 287/332 (86%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G+T G+KR +TGK I PVG TLGRI++VLG PID +GE
Sbjct: 40 EVQQQLGDGIVRTIAMGSTEGLKRGLKADNTGKAISVPVGTQTLGRIMDVLGRPIDEQGE 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P +++Q + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWAIHRKAPGYADQSASADLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFY+EMK+SNVLDKV+++YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKEHSGLSVFAGVGERTREGNDFYYEMKDSNVLDKVAMVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLA+EMG+LQE
Sbjct: 220 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAQEMGELQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF+HLD+T+VLSR IA GIYPAIDPL+S
Sbjct: 280 RITSTKTGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRDIASKGIYPAIDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY+VA V+ LQ+YKELKD
Sbjct: 340 SRQLDPLVIGDEHYEVARGVQTNLQRYKELKD 371
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 147/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G K T K +PVG + LGRI++ G ID + + + R + + APG D+
Sbjct: 59 EGLKRGLKADNTGKAISVPVGTQTLGRIMDVLGRPIDEQGEIGEEERWAIHRKAPGYADQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ + L TGIK ID + P KG + + G GKT ++ I N K + + ++ +
Sbjct: 119 SASADLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + ++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 GERTREGNDFYYEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + + L ER I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAQEMGELQER-------------ITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P S D + L ++ + PAI+ S SR
Sbjct: 286 TGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRDIASKGIYPAIDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y++ + ++ L +Y+EL+
Sbjct: 346 LVIGDEHYEVARG----VQTNLQRYKELK 370
>gi|322835102|ref|YP_004215129.1| ATP synthase F1 subunit beta [Rahnella sp. Y9602]
gi|384260325|ref|YP_005404259.1| F0F1 ATP synthase subunit beta [Rahnella aquatilis HX2]
gi|321170303|gb|ADW76002.1| ATP synthase F1, beta subunit [Rahnella sp. Y9602]
gi|380756301|gb|AFE60692.1| F0F1 ATP synthase subunit beta [Rahnella aquatilis HX2]
Length = 460
Score = 507 bits (1306), Expect = e-140, Method: Compositional matrix adjust.
Identities = 238/361 (65%), Positives = 293/361 (81%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + + + + ++N S + +VQQQ+G +VR IA G ++G++R V +
Sbjct: 13 VVDVEFPQDAVPNVYNALEVENGTSKLVLEVQQQLGGGVVRCIAMGTSDGLRRGLKVNNL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
PI PVG TLGRI+NVLG+PID KG I +++ IH P + + +LETGIK
Sbjct: 73 EHPIEVPVGKATLGRIMNVLGEPIDMKGAIGEEERRAIHRAAPSYEELANSQELLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
V+DL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VMDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM +SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAG
Sbjct: 193 EMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGALQERITSTKSGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K E E+PVG LGRI+N GE ID K + R + + AP +
Sbjct: 62 GLRRGLKVNNLEHPIEVPVGKATLGRIMNVLGEPIDMKGAIGEEERRAIHRAAPSYEELA 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK +D M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVMDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I + +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGAL------QERITSTKS 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|207744812|ref|YP_002261204.1| atp synthase beta chain protein [Ralstonia solanacearum IPO1609]
gi|206596222|emb|CAQ63149.1| atp synthase beta chain protein [Ralstonia solanacearum IPO1609]
Length = 439
Score = 507 bits (1306), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V +TG PI PVG TLGRI++VLG PID G
Sbjct: 50 EVQQQLGDGVVRTIALGSSDGLRRGMRVANTGAPISVPVGHGTLGRIMDVLGRPIDEAGP 109
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++K IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 110 IACEEKRGIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 169
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 170 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 229
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 230 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 289
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 290 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 349
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY+VA+ VK LQ+YKEL+D
Sbjct: 350 SRQLDPQVVGQEHYEVADRVKKTLQRYKELRD 381
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG LGRI++ G ID + + + + AP +
Sbjct: 70 GLRRGMRVANTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIACEEKRGIHQKAPKFDELS 129
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 130 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 189
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 190 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 249
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 250 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 296
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 297 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQ 356
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y++ + ++ L +Y+EL
Sbjct: 357 VVGQEHYEVADR----VKKTLQRYKEL 379
>gi|403049252|ref|ZP_10903736.1| F0F1 ATP synthase subunit beta [SAR86 cluster bacterium SAR86D]
Length = 465
Score = 507 bits (1306), Expect = e-140, Method: Compositional matrix adjust.
Identities = 241/363 (66%), Positives = 293/363 (80%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + NI K + + + +VQQQ+G+ +VRTIA G T G+KR T PI
Sbjct: 16 VEFEKDNIPKVYEALLIDEGEITLEVQQQLGDGVVRTIAMGATEGLKRGLTASRTNAPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG+PID KG I K+K PIH PP +++Q +N++LETGIKVIDL+
Sbjct: 76 VPVGPETLGRIVDVLGNPIDEKGPIGEKQKMPIHRKPPSYTDQSASNDVLETGIKVIDLM 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGKIGLFGGAGVGKTVNMMELI NIA++H G SVF GVGER+REGNDFY+EM+ES
Sbjct: 136 CPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYYEMQES 195
Query: 737 NVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
V++ KV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLFIDNIYR+TL
Sbjct: 196 GVVNIDNLGESKVAMVYGQMNEPPGNRLRVALTGLTMAESFRDEGKDVLLFIDNIYRYTL 255
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AG EVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+
Sbjct: 256 AGVEVSALLGRMPSAVGYQPTLAEEMGALQERITSTKTGSITSIQAVYVPADDLTDPSPA 315
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLD+T+VLSRQI+ELGIYPA+DPL+S S+QLDP++VG +HY VA V+ LQ+Y E
Sbjct: 316 TTFAHLDATVVLSRQISELGIYPAVDPLDSTSRQLDPFVVGNDHYNVAQGVQQILQRYNE 375
Query: 910 LKD 912
LKD
Sbjct: 376 LKD 378
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 142/341 (41%), Gaps = 40/341 (11%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG E LGRIV+ G ID K K + + + P D+
Sbjct: 59 EGLKRGLTASRTNAPISVPVGPETLGRIVDVLGNPIDEKGPIGEKQKMPIHRKPPSYTDQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ N+ L TGIK ID M P KG + + G GKT ++ I N + + ++ +
Sbjct: 119 SASNDVLETGIKVIDLMCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGV 178
Query: 294 GQKI------------SSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIG 341
G++ S ++N+ N + M Y + + TG T+
Sbjct: 179 GERTREGNDFYYEMQESGVVNIDNLGESKVAMVY-----GQMNEPPGNRLRVALTGLTMA 233
Query: 342 EYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINK 401
E FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 234 ESFRDEGKDVLLFIDNIYRYTLAGVEVSALLGR------MPSAVGY-QPTLAEEMGAL-- 284
Query: 402 YFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAI 461
+++I + G++T+ + D+T P + D + L + PA+
Sbjct: 285 ----QERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQISELGIYPAV 340
Query: 462 NVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ S SR V G Y + + ++ +L +Y EL+
Sbjct: 341 DPLDSTSRQLDPFVVGNDHYNVAQG----VQQILQRYNELK 377
>gi|308238142|emb|CBK55610.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
Length = 420
Score = 507 bits (1306), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/343 (68%), Positives = 284/343 (82%), Gaps = 1/343 (0%)
Query: 570 IINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILN 629
I+ +NN++I +VQ Q+G+ + R IA G + G+KR V TG PI PVG TLGRI+N
Sbjct: 13 IVVDENNLTI-EVQAQLGDGVARGIAMGASEGLKRGLAVTRTGAPISVPVGHATLGRIMN 71
Query: 630 VLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFG 689
VLG+P+D KG + ++ + IH P F + +LETGIKVIDL+CPF KGGK+GLFG
Sbjct: 72 VLGEPVDGKGPVQTEDRQAIHRPAPAFDELAASTEVLETGIKVIDLVCPFAKGGKVGLFG 131
Query: 690 GAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQM 749
GAGVGKTV MMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S VLDKV+L+YGQM
Sbjct: 132 GAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVLDKVALVYGQM 191
Query: 750 NEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQP 809
NEP GNRLR LTGL++AE FR+ G+D+L+FIDNI+R+TLAGTEVSA+LGR PSAVGYQP
Sbjct: 192 NEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLGRMPSAVGYQP 251
Query: 810 TLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELG 869
TLAEEMG+LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELG
Sbjct: 252 TLAEEMGQLQERITSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELG 311
Query: 870 IYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IYPA+DPL+S+S+QLDP IVG+EHY VA + LQ+YKEL+D
Sbjct: 312 IYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQD 354
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 145/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI+N GE +D K ++R+ + + AP +
Sbjct: 42 EGLKRGLAVTRTGAPISVPVGHATLGRIMNVLGEPVDGKGPVQTEDRQAIHRPAPAFDEL 101
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ E L TGIK ID + P KG + + G GKT + ++ I N ++ ++ +
Sbjct: 102 AASTEVLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGV 161
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ +D +V + + + TG T+ E+FRD G+D L+
Sbjct: 162 GERTREGNDFYHEMTDSGVLDKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILM 221
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E ++ +++I +
Sbjct: 222 FIDNIFRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGQL------QERITSTK 268
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 269 VGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPALDPLDSFSRQLDP 328
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + + L +Y+EL+
Sbjct: 329 QIVGQEHYDVARS----CQKTLQRYKELQ 353
>gi|112791352|gb|ABI21946.1| ATP synthase beta subunit, partial [Ewingella americana]
gi|112791354|gb|ABI21947.1| ATP synthase beta subunit, partial [Hafnia alvei]
Length = 421
Score = 507 bits (1306), Expect = e-140, Method: Compositional matrix adjust.
Identities = 238/347 (68%), Positives = 289/347 (83%), Gaps = 2/347 (0%)
Query: 568 FRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLG 625
+ + ++N S + +VQQQ+G +VR IA G ++G++R V + PI PVG TLG
Sbjct: 2 YNALEVENGASKLVLEVQQQLGGGVVRCIAMGTSDGLRRGLKVNNLEHPIEVPVGKATLG 61
Query: 626 RILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKI 685
RI+NVLG+PID KGEI +++ IH P + + +LETGIKV+DL+CPF KGGK+
Sbjct: 62 RIMNVLGEPIDMKGEIGEEERRAIHRPAPSYEELANSQELLETGIKVMDLMCPFAKGGKV 121
Query: 686 GLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLI 745
GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181
Query: 746 YGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAV 805
YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAV
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAV 241
Query: 806 GYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQI 865
GYQPTLAEEMG LQERI+STK+G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQI
Sbjct: 242 GYQPTLAEEMGALQERITSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 301
Query: 866 AELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
A LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K E E+PVG LGRI+N GE ID K + + R + + AP +
Sbjct: 37 GLRRGLKVNNLEHPIEVPVGKATLGRIMNVLGEPIDMKGEIGEEERRAIHRPAPSYEELA 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK +D M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NSQELLETGIKVMDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I + +
Sbjct: 217 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGAL------QERITSTKS 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDVARG----VQSILQRYQELK 347
>gi|420640150|ref|ZP_15128528.1| ATP synthase F1, beta subunit [Yersinia pestis PY-25]
gi|420661984|ref|ZP_15148221.1| ATP synthase F1, beta subunit [Yersinia pestis PY-36]
gi|420667332|ref|ZP_15153045.1| ATP synthase F1, beta subunit [Yersinia pestis PY-42]
gi|420705450|ref|ZP_15186466.1| ATP synthase F1, beta subunit [Yersinia pestis PY-54]
gi|420721720|ref|ZP_15200807.1| ATP synthase F1, beta subunit [Yersinia pestis PY-58]
gi|420760334|ref|ZP_15234472.1| ATP synthase F1, beta subunit [Yersinia pestis PY-66]
gi|420765391|ref|ZP_15239026.1| ATP synthase F1, beta subunit [Yersinia pestis PY-71]
gi|420786883|ref|ZP_15258105.1| ATP synthase F1, beta subunit [Yersinia pestis PY-89]
gi|420797467|ref|ZP_15267631.1| ATP synthase F1, beta subunit [Yersinia pestis PY-91]
gi|420850570|ref|ZP_15315503.1| ATP synthase F1, beta subunit [Yersinia pestis PY-102]
gi|391505157|gb|EIR59190.1| ATP synthase F1, beta subunit [Yersinia pestis PY-25]
gi|391530442|gb|EIR82020.1| ATP synthase F1, beta subunit [Yersinia pestis PY-36]
gi|391533544|gb|EIR84808.1| ATP synthase F1, beta subunit [Yersinia pestis PY-42]
gi|391567736|gb|EIS15567.1| ATP synthase F1, beta subunit [Yersinia pestis PY-54]
gi|391590727|gb|EIS35405.1| ATP synthase F1, beta subunit [Yersinia pestis PY-58]
gi|391624167|gb|EIS64841.1| ATP synthase F1, beta subunit [Yersinia pestis PY-66]
gi|391632657|gb|EIS72155.1| ATP synthase F1, beta subunit [Yersinia pestis PY-71]
gi|391651724|gb|EIS88862.1| ATP synthase F1, beta subunit [Yersinia pestis PY-89]
gi|391665072|gb|EIT00693.1| ATP synthase F1, beta subunit [Yersinia pestis PY-91]
gi|391721621|gb|EIT51525.1| ATP synthase F1, beta subunit [Yersinia pestis PY-102]
Length = 421
Score = 507 bits (1306), Expect = e-140, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G+ R V + PI PVG TLGRI+NVLG+PID KG
Sbjct: 3 EVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGP 62
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + ++LETGIKV+DL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 63 IGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMM 122
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 123 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 182
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 183 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 242
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 243 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 302
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 303 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 334
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G K E E+PVG LGRI+N GE ID K + R + + AP +
Sbjct: 23 GLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELA 82
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S + L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 83 SSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 142
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 143 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 202
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 203 IDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 249
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 250 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 309
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 310 VVGQEHYDVARG----VQSILQRYQELK 333
>gi|219871749|ref|YP_002476124.1| F0F1 ATP synthase subunit beta/H(+)-transporting two-sector ATPase,
F(1) subunit beta [Haemophilus parasuis SH0165]
gi|254808153|sp|B8F774.1|ATPB_HAEPS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|219691953|gb|ACL33176.1| F0F1 ATP synthase subunit beta/H(+)-transporting two-sector ATPase,
F(1) beta subunit [Haemophilus parasuis SH0165]
Length = 457
Score = 507 bits (1306), Expect = e-140, Method: Compositional matrix adjust.
Identities = 242/356 (67%), Positives = 291/356 (81%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + ++ +++ +VQQQ+G +VR IA G ++G+KR V +T K I
Sbjct: 16 VEFPQDAVPKVYDALKVETGLTL-EVQQQLGGGVVRCIALGTSDGLKRGLKVENTNKAIE 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID G I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEAGPIGEEERWTIHRAAPSYEEQANSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
PF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 APFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPAIDPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRNIASLGIYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQKTLQRYKELKD 370
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 146/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T K E+PVG + LGRI+N GE ID + R T+ + AP ++
Sbjct: 59 GLKRGLKVENTNKAIEVPVGTKTLGRIMNVLGEPIDEAGPIGEEERWTIHRAAPSYEEQA 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLIAPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PAI+ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAIDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ L +Y+EL+
Sbjct: 346 VVGQEHYDVAR----GVQKTLQRYKELK 369
>gi|358635168|dbj|BAL22465.1| F-type H+-transporting ATPase, beta subunit [Azoarcus sp. KH32C]
Length = 466
Score = 507 bits (1306), Expect = e-140, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V +TGK I PVG TLGRI++VLG PID G
Sbjct: 47 EVQQQLGDGVVRTIALGSSDGLRRGMKVANTGKAISVPVGHGTLGRIMDVLGRPIDEAGP 106
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ + + PIH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 107 VEADELRPIHAKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 166
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 167 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 226
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQE
Sbjct: 227 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 286
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 287 RITSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 346
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY VA +V+ LQ+YKEL+D
Sbjct: 347 SRQLDPLVVGEEHYGVARQVQMTLQRYKELRD 378
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 136/327 (41%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T K +PVG LGRI++ G ID + AP +
Sbjct: 67 GLRRGMKVANTGKAISVPVGHGTLGRIMDVLGRPIDEAGPVEADELRPIHAKAPKFDELS 126
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 127 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 186
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 187 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 246
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + RL ER I +
Sbjct: 247 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKV 293
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 294 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPL 353
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + ++ +++ L +Y+EL
Sbjct: 354 VVGEEHYGVARQ----VQMTLQRYKEL 376
>gi|89257058|ref|YP_514420.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
holarctica LVS]
gi|115315414|ref|YP_764137.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
holarctica OSU18]
gi|156503268|ref|YP_001429333.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|254368297|ref|ZP_04984316.1| ATP synthase beta chain [Francisella tularensis subsp. holarctica
257]
gi|254369895|ref|ZP_04985904.1| ATP synthase [Francisella tularensis subsp. holarctica FSC022]
gi|290953659|ref|ZP_06558280.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
holarctica URFT1]
gi|422939313|ref|YP_007012460.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
holarctica FSC200]
gi|423051439|ref|YP_007009873.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
holarctica F92]
gi|118573537|sp|Q2A1I2.1|ATPB_FRATH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|122324600|sp|Q0BK84.1|ATPB_FRATO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|166201704|sp|A7NEH4.1|ATPB_FRATF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|89144889|emb|CAJ80234.1| ATP synthase beta chain [Francisella tularensis subsp. holarctica
LVS]
gi|115130313|gb|ABI83500.1| H(+)-transporting two-sector ATPase [Francisella tularensis subsp.
holarctica OSU18]
gi|134254106|gb|EBA53200.1| ATP synthase beta chain [Francisella tularensis subsp. holarctica
257]
gi|156253871|gb|ABU62377.1| ATP synthase F1, beta subunit [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|157122865|gb|EDO66982.1| ATP synthase [Francisella tularensis subsp. holarctica FSC022]
gi|407294464|gb|AFT93370.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
holarctica FSC200]
gi|421952161|gb|AFX71410.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
holarctica F92]
Length = 458
Score = 507 bits (1306), Expect = e-140, Method: Compositional matrix adjust.
Identities = 241/356 (67%), Positives = 288/356 (80%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E N K + +N+ + +VQQQIG+ +VRTIA G+++G++R V +T PI
Sbjct: 16 VEFARDNTPKVYDALNVVEAGLVLEVQQQIGDGVVRTIAMGSSDGLRRGMEVKNTNAPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID G I +K IH PP + + ILETGIKV+DL+
Sbjct: 76 VPVGHGTLGRIMNVLGEPIDEAGPIEYTEKRSIHQAPPAYDELALSTEILETGIKVVDLI 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTV MMELI NIA EH G SVF GVGER+REGNDFY+EMK S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFSGVGERTREGNDFYYEMKYS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVAL+GL+IAE FR+ +DVL+FIDNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLA EMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF+HLD
Sbjct: 256 LLGRMPSAVGYQPTLAAEMGALQERITSTKTGSITSVQAVYVPADDLTDPSPATTFSHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+TIVLSRQIAELGIYPA+DPL+S S+QLDP +VG++HY+ A V+ LQ+YKELKD
Sbjct: 316 ATIVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQDHYETARAVQKVLQRYKELKD 371
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 136/327 (41%), Gaps = 23/327 (7%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G + T +PVG LGRI+N GE ID + ++ + P +
Sbjct: 61 LRRGMEVKNTNAPISVPVGHGTLGRIMNVLGEPIDEAGPIEYTEKRSIHQAPPAYDELAL 120
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK +D + P KG + + G GKT ++ I N K + ++ +G+
Sbjct: 121 STEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFSGVGE 180
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + ++KY N +D +V + + +G TI E FRD +D L+
Sbjct: 181 RTREGNDFYYEMKYSNVLDKVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFI 240
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + + L ER I + G
Sbjct: 241 DNIYRYTLAGTEVSALLGRMPSAVGYQPTLAAEMGALQER-------------ITSTKTG 287
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P S D I L + PA++ S SR V
Sbjct: 288 SITSVQAVYVPADDLTDPSPATTFSHLDATIVLSRQIAELGIYPAVDPLDSTSRQLDPLV 347
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y+ + ++ +L +Y+EL+
Sbjct: 348 VGQDHYETARA----VQKVLQRYKELK 370
>gi|386331798|ref|YP_006027967.1| ATP synthase, f1 sector subunit beta [Ralstonia solanacearum Po82]
gi|334194246|gb|AEG67431.1| ATP synthase, f1 sector subunit beta [Ralstonia solanacearum Po82]
Length = 469
Score = 507 bits (1306), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V +TG PI PVG TLGRI++VLG PID G
Sbjct: 50 EVQQQLGDGVVRTIALGSSDGLRRGMRVANTGAPISVPVGHGTLGRIMDVLGRPIDEAGP 109
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++K IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 110 IACEEKRGIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 169
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 170 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 229
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 230 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 289
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 290 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 349
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY+VA+ VK LQ+YKEL+D
Sbjct: 350 SRQLDPQVVGQEHYEVADRVKKTLQRYKELRD 381
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG LGRI++ G ID + + + + AP +
Sbjct: 70 GLRRGMRVANTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIACEEKRGIHQKAPKFDELS 129
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 130 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 189
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 190 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 249
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 250 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 296
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 297 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQ 356
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y++ + ++ L +Y+EL
Sbjct: 357 VVGQEHYEVADR----VKKTLQRYKEL 379
>gi|226371|prf||1508208B ATPase beta
Length = 460
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 236/338 (69%), Positives = 281/338 (83%)
Query: 575 NNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDP 634
N + +VQQQ+G +VR IA G+++G++R V D P PVG LGRI+NVLG+P
Sbjct: 36 NESLVLEVQQQLGGGVVRAIAMGSSDGLRRGLEVKDLEHPTEVPVGKAILGRIMNVLGEP 95
Query: 635 IDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVG 694
ID KG+I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVG
Sbjct: 96 IDMKGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVG 155
Query: 695 KTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSG 754
KTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP G
Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPG 215
Query: 755 NRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
NRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 216 NRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 275
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+
Sbjct: 276 MGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAV 335
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 336 DPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKD 373
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 147/336 (43%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L +G + E E+PVG +LGRI+N GE ID K + R + +
Sbjct: 54 AIAMGSSDGLRRGLEVKDLEHPTEVPVGKAILGRIMNVLGEPIDMKGDIGEEERWAIHRA 113
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP + S E L TGIK ID M P KG + + G GKT ++ I N +
Sbjct: 114 APSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 173
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++ N +D +V + + TG T+ E FRD
Sbjct: 174 YSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRD 233
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L+ D++ ++ A ++S LL R P V Y + + + + +
Sbjct: 234 EGRDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQ 280
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L + + PA++ S
Sbjct: 281 ERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDS 340
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y + ++ +L +Y+EL+
Sbjct: 341 TSRQLDPLVVGQEHYDTARG----VQSLLQRYQELK 372
>gi|381160563|ref|ZP_09869795.1| ATP synthase, F1 beta subunit [Thiorhodovibrio sp. 970]
gi|380878627|gb|EIC20719.1| ATP synthase, F1 beta subunit [Thiorhodovibrio sp. 970]
Length = 458
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+V+QQIG+ +VRTIA G T+G+KR V +TG PI PVG TLGRI++VLG PID G
Sbjct: 40 EVEQQIGDGVVRTIAMGTTDGLKRGVEVSNTGAPISVPVGKATLGRIMDVLGKPIDELGA 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ S++ PIH PKF +Q + +LETGIKV+DL+ P KGGK+GLFGGAGVGKTV +M
Sbjct: 100 VGSEETWPIHRPAPKFEDQATSTEVLETGIKVVDLIMPIAKGGKVGLFGGAGVGKTVTLM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA+EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAVEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR G+DVL+F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLA EMG LQE
Sbjct: 220 LTGLTMAEFFREEGRDVLMFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+ST+ G+ITS QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELGIYPA+DPL+S
Sbjct: 280 RITSTRTGSITSFQAVYVPADDLTDPSPATTFAHLDATLVLSRQIAELGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+ LDP +VG+EHY A V+ LQ+YKELKD
Sbjct: 340 SRILDPNVVGQEHYDTARAVQGTLQRYKELKD 371
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 140/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG LGRI++ G+ ID + + + AP D+
Sbjct: 60 GLKRGVEVSNTGAPISVPVGKATLGRIMDVLGKPIDELGAVGSEETWPIHRPAPKFEDQA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK +D ++PI KG + + G GKT ++ I N + ++ +G
Sbjct: 120 TSTEVLETGIKVVDLIMPIAKGGKVGLFGGAGVGKTVTLMELIRNIAVEHSGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FR+ G+D L+
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFREEGRDVLMF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + L ER I +
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQER-------------ITSTRT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+F + D+T P + D + L + PA++ S SR
Sbjct: 287 GSITSFQAVYVPADDLTDPSPATTFAHLDATLVLSRQIAELGIYPAVDPLDSTSRILDPN 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + G L +Y+EL+
Sbjct: 347 VVGQEHYDTARAVQG----TLQRYKELK 370
>gi|254447640|ref|ZP_05061106.1| ATP synthase F1, beta subunit [gamma proteobacterium HTCC5015]
gi|198262983|gb|EDY87262.1| ATP synthase F1, beta subunit [gamma proteobacterium HTCC5015]
Length = 457
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 238/359 (66%), Positives = 295/359 (82%), Gaps = 1/359 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E ++ K + + ++ +++ +VQ Q+G+ +VRTIA G + G+ R V +TG
Sbjct: 13 VVDVEFPRGSVPKVYDALKTESGLTL-EVQGQLGDGVVRTIAMGVSEGLSRGVNVENTGS 71
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
I PVG TLGRI+NVLG+PID+ G++ S + IH P + +Q ++ +LETGIKVI
Sbjct: 72 AISVPVGQGTLGRIMNVLGEPIDHAGDVKSDETRAIHQEAPSYEDQSASSELLETGIKVI 131
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFYHEM
Sbjct: 132 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHSGFSVFAGVGERTREGNDFYHEM 191
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTE 793
K+SNVLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGTE
Sbjct: 192 KDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLLFVDNIYRYTLAGTE 251
Query: 794 VSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFT 853
VSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF
Sbjct: 252 VSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFA 311
Query: 854 HLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VL+R IAELGIYPA+DPL+S S+QLDP +VG+EHY++A V+ LQ+YKELKD
Sbjct: 312 HLDATVVLNRSIAELGIYPAVDPLDSTSRQLDPLVVGDEHYEIARAVQGTLQRYKELKD 370
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 146/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L++G T +PVG LGRI+N GE ID+ + + AP D+
Sbjct: 58 EGLSRGVNVENTGSAISVPVGQGTLGRIMNVLGEPIDHAGDVKSDETRAIHQEAPSYEDQ 117
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ +E L TGIK ID + P KG + + G GKT ++ I N K + ++ +
Sbjct: 118 SASSELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHSGFSVFAGV 177
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E+FRD G+D L+
Sbjct: 178 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLL 237
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 284
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L+ ++ PA++ S SR
Sbjct: 285 TGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRSIAELGIYPAVDPLDSTSRQLDP 344
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+I + + G L +Y+EL+
Sbjct: 345 LVVGDEHYEIARAVQG----TLQRYKELK 369
>gi|170729216|ref|YP_001763242.1| F0F1 ATP synthase subunit beta [Shewanella woodyi ATCC 51908]
gi|226740675|sp|B1KQ34.1|ATPB_SHEWM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|169814563|gb|ACA89147.1| ATP synthase F1, beta subunit [Shewanella woodyi ATCC 51908]
Length = 458
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/359 (65%), Positives = 294/359 (81%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + + + + + +K+ + +VQQQ+G +VRTIA G+++G++R VV++G
Sbjct: 13 VVDVEFPQDAVPQVYDALEIKSEDLVLEVQQQLGGGVVRTIAMGSSDGLRRGLEVVNSGS 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG+ TLGRI+NVLG P+D GEI +++ IH P + +Q +LETGIKVI
Sbjct: 73 PISVPVGEKTLGRIMNVLGQPVDEAGEIGEEERYVIHREAPSYEDQSNTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFY+EM
Sbjct: 133 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYYEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTE 793
++S VLDKV+++YGQMNEP GNRLRVALTGL++AE+FR+ GKDVL F+DNIYR+TLAGTE
Sbjct: 193 EDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLFFVDNIYRYTLAGTE 252
Query: 794 VSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFT 853
VSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF
Sbjct: 253 VSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFA 312
Query: 854 HLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA +GIYPA+DPL+S S+QLDP +VG+EHY VAN V+ LQ+YKELKD
Sbjct: 313 HLDATVVLSRNIASMGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKD 371
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + +PVG + LGRI+N G+ +D + + R + + AP D+
Sbjct: 60 GLRRGLEVVNSGSPISVPVGEKTLGRIMNVLGQPVDEAGEIGEEERYVIHREAPSYEDQS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 NTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ +D +V + + TG T+ E FRD G+D L
Sbjct: 180 ERTREGNDFYYEMEDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLFF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASMGIYPAVDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 347 VVGQEHYDV----ANGVQTVLQRYKELK 370
>gi|456062359|ref|YP_007501329.1| F0F1 ATP synthase subunit beta [beta proteobacterium CB]
gi|455439656|gb|AGG32594.1| F0F1 ATP synthase subunit beta [beta proteobacterium CB]
Length = 466
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQIG+ +VR IA G ++G++R V TG PI PVG TLGRI++VLG PID+ G
Sbjct: 48 EVQQQIGDGVVRAIAMGASDGLRRGMEVKSTGGPISVPVGPATLGRIMDVLGRPIDDAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++++ IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IATEERRAIHQPAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMKESNV+DKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKESNVIDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LTGLTMAEAFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G++TS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKTGSVTSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY+VA EV+ LQ+YKEL+D
Sbjct: 348 SRQLDPQVVGQEHYEVAREVQMTLQRYKELRD 379
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 146/335 (43%), Gaps = 23/335 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L +G + T +PVG LGRI++ G ID+ + R + +
Sbjct: 60 AIAMGASDGLRRGMEVKSTGGPISVPVGPATLGRIMDVLGRPIDDAGPIATEERRAIHQP 119
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP + + L TGIK ID + P KG + + G GKT ++ I N K +
Sbjct: 120 APKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSG 179
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
+ ++ +G++ + +++K N +D +V + + TG T+ E FRD
Sbjct: 180 LSVFAGVGERTREGNDFYHEMKESNVIDKVAMVFGQMNEPPGNRLRVALTGLTMAEAFRD 239
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L D++ ++ A ++S LL R P V Y L E K+ +
Sbjct: 240 EGRDILFFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------Q 286
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P D + L ++ PA++ S
Sbjct: 287 ERITSTKTGSVTSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDS 346
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
SR V G Y++ + ++++ L +Y+EL
Sbjct: 347 TSRQLDPQVVGQEHYEVAR----EVQMTLQRYKEL 377
>gi|410665021|ref|YP_006917392.1| F0F1 ATP synthase subunit alpha [Simiduia agarivorans SA1 = DSM
21679]
gi|409027378|gb|AFU99662.1| F0F1 ATP synthase subunit alpha [Simiduia agarivorans SA1 = DSM
21679]
Length = 514
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 233/404 (57%), Positives = 307/404 (75%), Gaps = 4/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D L +GQK CT +I E+PVG LLGR+V++ G ID K + +EKI
Sbjct: 74 AVVLGDTSGLAEGQKARCTGRILEVPVGEGLLGRVVDALGNPIDGKGALSTTETDAIEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ G+K++D+M+PIG+GQRELIIGDRQTGKT IA+D IINQK +
Sbjct: 134 APGVIARQSVDQPVQIGLKAVDAMVPIGRGQRELIIGDRQTGKTAIAVDAIINQKGTGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK SS+ V+ KL+ + MD+T+V+AATA+D AA Q+++P+ GCT+GEYFRD
Sbjct: 194 CVYVAIGQKASSVAAVVRKLEEHGAMDHTIVIAATASDPAAMQFLAPFAGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 254 GEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNAEYVEKF 313
Query: 407 --KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVG 464
K+ K G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPA+N G
Sbjct: 314 TDGKVKGK-TGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSLFNAGIRPAMNAG 372
Query: 465 LSVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLM 524
+SVSRVGGAAQ K VKKLSG IR LAQYREL +FS+F+SDLD TK QL +GE+++ LM
Sbjct: 373 ISVSRVGGAAQTKAVKKLSGGIRTALAQYRELAAFSQFASDLDEATKAQLNHGERVTELM 432
Query: 525 KQKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
KQK ++ + EL +++ F + + +I FE ++ Y
Sbjct: 433 KQKQYQPLKVAELAVVVYAANEGFLKDVEVAKIGAFEAALLSYM 476
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 157/341 (46%), Gaps = 23/341 (6%)
Query: 588 ENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKS 647
++ V + G+T+G+ TG+ + PVG+ LGR+++ LG+PID KG +++ +
Sbjct: 69 QDSVGAVVLGDTSGLAEGQKARCTGRILEVPVGEGLLGRVVDALGNPIDGKGALSTTETD 128
Query: 648 PIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIA 707
I + P + + ++ G+K +D + P +G + + G GKT ++ I
Sbjct: 129 AIEKIAPGVIARQSVDQPVQIGLKAVDAMVPIGRGQRELIIGDRQTGKTAIAVDAI---- 184
Query: 708 IEHKGCS---VFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGL 764
I KG V++ +G+++ +++E +D +I ++P+ + G
Sbjct: 185 INQKGTGIKCVYVAIGQKASSVAAVVRKLEEHGAMDHTIVIAATASDPAAMQFLAPFAGC 244
Query: 765 SIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISS 824
++ E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 245 TMGEYFRDRGEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAR 304
Query: 825 T---------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELG 869
K G++T++ I A D++ P+ + D I L + G
Sbjct: 305 VNAEYVEKFTDGKVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSLFNAG 364
Query: 870 IYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
I PA++ S S+ + + K++ ++ L +Y+EL
Sbjct: 365 IRPAMNAGISVSR-VGGAAQTKAVKKLSGGIRTALAQYREL 404
>gi|22128003|ref|NP_671426.1| ATP synthase F0F1 subunit beta [Yersinia pestis KIM10+]
gi|45443751|ref|NP_995290.1| ATP synthase F0F1 subunit beta [Yersinia pestis biovar Microtus
str. 91001]
gi|51598251|ref|YP_072442.1| ATP synthase F0F1 subunit beta [Yersinia pseudotuberculosis IP
32953]
gi|108810156|ref|YP_654072.1| F0F1 ATP synthase subunit beta [Yersinia pestis Antiqua]
gi|108814138|ref|YP_649905.1| F0F1 ATP synthase subunit beta [Yersinia pestis Nepal516]
gi|145601152|ref|YP_001165228.1| F0F1 ATP synthase subunit beta [Yersinia pestis Pestoides F]
gi|150260945|ref|ZP_01917673.1| ATP synthase beta subunit protein [Yersinia pestis CA88-4125]
gi|153948511|ref|YP_001403118.1| F0F1 ATP synthase subunit beta [Yersinia pseudotuberculosis IP
31758]
gi|162421072|ref|YP_001608472.1| F0F1 ATP synthase subunit beta [Yersinia pestis Angola]
gi|165926118|ref|ZP_02221950.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165939967|ref|ZP_02228504.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis
str. IP275]
gi|166009572|ref|ZP_02230470.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213362|ref|ZP_02239397.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401612|ref|ZP_02307106.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422841|ref|ZP_02314594.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167425526|ref|ZP_02317279.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|170026430|ref|YP_001722935.1| F0F1 ATP synthase subunit beta [Yersinia pseudotuberculosis YPIII]
gi|186897468|ref|YP_001874580.1| F0F1 ATP synthase subunit beta [Yersinia pseudotuberculosis PB1/+]
gi|218931097|ref|YP_002348972.1| ATP synthase F0F1 subunit beta [Yersinia pestis CO92]
gi|229839830|ref|ZP_04459989.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229841915|ref|ZP_04462071.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
pestis biovar Orientalis str. India 195]
gi|229896792|ref|ZP_04511955.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
pestis Pestoides A]
gi|229904681|ref|ZP_04519792.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
pestis Nepal516]
gi|270488391|ref|ZP_06205465.1| ATP synthase F1, beta subunit [Yersinia pestis KIM D27]
gi|384138028|ref|YP_005520730.1| F0F1 ATP synthase subunit beta [Yersinia pestis A1122]
gi|384416951|ref|YP_005626313.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
pestis biovar Medievalis str. Harbin 35]
gi|420570743|ref|ZP_15066151.1| ATP synthase F1, beta subunit [Yersinia pestis PY-05]
gi|420624748|ref|ZP_15114650.1| ATP synthase F1, beta subunit [Yersinia pestis PY-15]
gi|420629711|ref|ZP_15119154.1| ATP synthase F1, beta subunit [Yersinia pestis PY-16]
gi|420634872|ref|ZP_15123775.1| ATP synthase F1, beta subunit [Yersinia pestis PY-19]
gi|420677521|ref|ZP_15162329.1| ATP synthase F1, beta subunit [Yersinia pestis PY-46]
gi|420688484|ref|ZP_15172144.1| ATP synthase F1, beta subunit [Yersinia pestis PY-48]
gi|420693784|ref|ZP_15176772.1| ATP synthase F1, beta subunit [Yersinia pestis PY-52]
gi|420710645|ref|ZP_15191182.1| ATP synthase F1, beta subunit [Yersinia pestis PY-55]
gi|420743118|ref|ZP_15220003.1| ATP synthase F1, beta subunit [Yersinia pestis PY-63]
gi|420754262|ref|ZP_15229672.1| ATP synthase F1, beta subunit [Yersinia pestis PY-65]
gi|420781258|ref|ZP_15253184.1| ATP synthase F1, beta subunit [Yersinia pestis PY-88]
gi|420824129|ref|ZP_15291634.1| ATP synthase F1, beta subunit [Yersinia pestis PY-96]
gi|420839705|ref|ZP_15305702.1| ATP synthase F1, beta subunit [Yersinia pestis PY-100]
gi|420844922|ref|ZP_15310431.1| ATP synthase F1, beta subunit [Yersinia pestis PY-101]
gi|421765643|ref|ZP_16202426.1| F0F1 ATP synthase subunit beta [Yersinia pestis INS]
gi|81825677|sp|Q663Q8.1|ATPB_YERPS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|118573782|sp|Q1C095.1|ATPB_YERPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|122979850|sp|Q1CCH5.1|ATPB_YERPN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|123776436|sp|Q7CFM8.1|ATPB_YERPE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|166222427|sp|A4TSJ3.1|ATPB_YERPP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|166990376|sp|A7FPE0.1|ATPB_YERP3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740695|sp|B2K847.1|ATPB_YERPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740696|sp|A9R5T9.1|ATPB_YERPG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740697|sp|B1JRN2.1|ATPB_YERPY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|21961151|gb|AAM87677.1|AE014015_2 membrane-bound ATP synthase, F1 sector, beta-subunit [Yersinia
pestis KIM10+]
gi|45438621|gb|AAS64167.1| ATP synthase beta subunit protein [Yersinia pestis biovar Microtus
str. 91001]
gi|51591533|emb|CAH23205.1| ATP synthase beta subunit protein [Yersinia pseudotuberculosis IP
32953]
gi|108777786|gb|ABG20305.1| ATP synthase beta subunit protein [Yersinia pestis Nepal516]
gi|108782069|gb|ABG16127.1| ATP synthase beta subunit protein [Yersinia pestis Antiqua]
gi|115349708|emb|CAL22689.1| ATP synthase beta subunit protein [Yersinia pestis CO92]
gi|145212848|gb|ABP42255.1| ATP synthase beta subunit protein [Yersinia pestis Pestoides F]
gi|149290353|gb|EDM40430.1| ATP synthase beta subunit protein [Yersinia pestis CA88-4125]
gi|152960006|gb|ABS47467.1| ATP synthase F1, beta subunit [Yersinia pseudotuberculosis IP
31758]
gi|162353887|gb|ABX87835.1| ATP synthase F1, beta subunit [Yersinia pestis Angola]
gi|165912093|gb|EDR30733.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis
str. IP275]
gi|165921978|gb|EDR39155.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165991494|gb|EDR43795.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205660|gb|EDR50140.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958233|gb|EDR55254.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167048994|gb|EDR60402.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167055540|gb|EDR65333.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169752964|gb|ACA70482.1| ATP synthase F1, beta subunit [Yersinia pseudotuberculosis YPIII]
gi|186700494|gb|ACC91123.1| ATP synthase F1, beta subunit [Yersinia pseudotuberculosis PB1/+]
gi|229678799|gb|EEO74904.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
pestis Nepal516]
gi|229691254|gb|EEO83307.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
pestis biovar Orientalis str. India 195]
gi|229696196|gb|EEO86243.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229700230|gb|EEO88266.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
pestis Pestoides A]
gi|270336895|gb|EFA47672.1| ATP synthase F1, beta subunit [Yersinia pestis KIM D27]
gi|320017455|gb|ADW01027.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
pestis biovar Medievalis str. Harbin 35]
gi|342853157|gb|AEL71710.1| F0F1 ATP synthase subunit beta [Yersinia pestis A1122]
gi|391436707|gb|EIQ97637.1| ATP synthase F1, beta subunit [Yersinia pestis PY-05]
gi|391485686|gb|EIR41803.1| ATP synthase F1, beta subunit [Yersinia pestis PY-15]
gi|391500212|gb|EIR54737.1| ATP synthase F1, beta subunit [Yersinia pestis PY-16]
gi|391500451|gb|EIR54952.1| ATP synthase F1, beta subunit [Yersinia pestis PY-19]
gi|391549120|gb|EIR98853.1| ATP synthase F1, beta subunit [Yersinia pestis PY-46]
gi|391549536|gb|EIR99234.1| ATP synthase F1, beta subunit [Yersinia pestis PY-48]
gi|391563544|gb|EIS11849.1| ATP synthase F1, beta subunit [Yersinia pestis PY-52]
gi|391579001|gb|EIS25183.1| ATP synthase F1, beta subunit [Yersinia pestis PY-55]
gi|391609319|gb|EIS51728.1| ATP synthase F1, beta subunit [Yersinia pestis PY-63]
gi|391622304|gb|EIS63242.1| ATP synthase F1, beta subunit [Yersinia pestis PY-65]
gi|391647473|gb|EIS85098.1| ATP synthase F1, beta subunit [Yersinia pestis PY-88]
gi|391690487|gb|EIT23512.1| ATP synthase F1, beta subunit [Yersinia pestis PY-96]
gi|391706506|gb|EIT37935.1| ATP synthase F1, beta subunit [Yersinia pestis PY-100]
gi|391707045|gb|EIT38434.1| ATP synthase F1, beta subunit [Yersinia pestis PY-101]
gi|411172963|gb|EKS43012.1| F0F1 ATP synthase subunit beta [Yersinia pestis INS]
Length = 460
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G+ R V + PI PVG TLGRI+NVLG+PID KG
Sbjct: 42 EVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGP 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + ++LETGIKV+DL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 373
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G K E E+PVG LGRI+N GE ID K + R + + AP +
Sbjct: 62 GLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELA 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S + L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|260551344|ref|ZP_05825545.1| membrane-bound ATP synthase F1 sector [Acinetobacter sp. RUH2624]
gi|424057330|ref|ZP_17794847.1| ATP synthase subunit beta [Acinetobacter nosocomialis Ab22222]
gi|425739167|ref|ZP_18857377.1| ATP synthase F1, beta subunit [Acinetobacter baumannii WC-487]
gi|445439085|ref|ZP_21441502.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC021]
gi|260405658|gb|EEW99149.1| membrane-bound ATP synthase F1 sector [Acinetobacter sp. RUH2624]
gi|407440863|gb|EKF47380.1| ATP synthase subunit beta [Acinetobacter nosocomialis Ab22222]
gi|425497061|gb|EKU63174.1| ATP synthase F1, beta subunit [Acinetobacter baumannii WC-487]
gi|444752394|gb|ELW77079.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC021]
Length = 464
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 237/362 (65%), Positives = 291/362 (80%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + + + +VQQQ+G+ +VRTIA G+T G+KR V T PI
Sbjct: 16 VEFERTSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLTVTSTNAPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G + ++++ PIH P ++ Q + ++LETGIKVIDLL
Sbjct: 76 VPVGTATLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLETGIKVIDLL 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
NVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVDNIYRYTLA 255
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+T
Sbjct: 256 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPAT 315
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLD+T+VLSR IA GIYPAIDPL+S S+QLDP +VG+EHY++A V+ LQ+YKEL
Sbjct: 316 TFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARAVQNVLQRYKEL 375
Query: 911 KD 912
KD
Sbjct: 376 KD 377
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 170/397 (42%), Gaps = 35/397 (8%)
Query: 151 QINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSK 206
Q++GT E Q G V + + + L +G T +PVG LGRI++
Sbjct: 31 QVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLTVTSTNAPISVPVGTATLGRIMDVL 90
Query: 207 GEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDR 266
G ID + R + + AP ++ + + L TGIK ID + P KG + + G
Sbjct: 91 GRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLETGIKVIDLLCPFAKGGKVGLFGGA 150
Query: 267 QTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAAD 325
GKT ++ I N K + + ++ +G++ + +++K N +D +V +
Sbjct: 151 GVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNE 210
Query: 326 SAAEQYISPYTGCTIGEYFRDL------GQDCLIIYDDLTKHAWAYRQISLLLRRPPGRE 379
+ TG T+ EYFRD G+D L+ D++ ++ A ++S LL R
Sbjct: 211 PPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVDNIYRYTLAGTEVSALLGR----- 265
Query: 380 AFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVI 439
P V Y L E + +++I + +G++T+ + D+T P
Sbjct: 266 -MPSAVGY-QPTLAEEMGVL------QERITSTKSGSITSIQAVYVPADDLTDPSPATTF 317
Query: 440 SITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYR 494
+ D + L ++ +S PAI+ S SR V G Y+I + ++ +L +Y+
Sbjct: 318 AHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARA----VQNVLQRYK 373
Query: 495 ELESFSKFSSDLDIVTKTQL--YNGEKISLLMKQKPH 529
EL+ ++ + +L Y KI Q H
Sbjct: 374 ELKDIIAILGMDELAEEDKLVVYRARKIQRFFSQPFH 410
>gi|198284879|ref|YP_002221200.1| ATP synthase F1 subunit beta [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218665303|ref|YP_002427559.1| ATP synthase F1 subunit beta [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198249400|gb|ACH84993.1| ATP synthase F1, beta subunit [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218517516|gb|ACK78102.1| ATP synthase F1, beta subunit [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 469
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/343 (68%), Positives = 283/343 (82%), Gaps = 1/343 (0%)
Query: 570 IINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILN 629
I+ NN++I +VQ Q+G+ + R IA G + G+KR V TG PI PVG TLGRI+N
Sbjct: 38 IVVDANNLTI-EVQAQLGDGVARGIAMGPSEGLKRGLAVTRTGAPISVPVGHATLGRIMN 96
Query: 630 VLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFG 689
VLG+P+D KG + ++ + IH P F + +LETGIKVIDL+CPF KGGK+GLFG
Sbjct: 97 VLGEPVDGKGPVQTEDRQAIHRPAPAFDELAASTEVLETGIKVIDLVCPFAKGGKVGLFG 156
Query: 690 GAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQM 749
GAGVGKTV MMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S VLDKV+L+YGQM
Sbjct: 157 GAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVLDKVALVYGQM 216
Query: 750 NEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQP 809
NEP GNRLR LTGL++AE FR+ G+D+L+FIDNI+R+TLAGTEVSA+LGR PSAVGYQP
Sbjct: 217 NEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLGRMPSAVGYQP 276
Query: 810 TLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELG 869
TLAEEMG+LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELG
Sbjct: 277 TLAEEMGQLQERITSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELG 336
Query: 870 IYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IYPA+DPL+S+S+QLDP IVG+EHY VA + LQ+YKEL+D
Sbjct: 337 IYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQD 379
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 145/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI+N GE +D K ++R+ + + AP +
Sbjct: 67 EGLKRGLAVTRTGAPISVPVGHATLGRIMNVLGEPVDGKGPVQTEDRQAIHRPAPAFDEL 126
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ E L TGIK ID + P KG + + G GKT + ++ I N ++ ++ +
Sbjct: 127 AASTEVLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGV 186
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ +D +V + + + TG T+ E+FRD G+D L+
Sbjct: 187 GERTREGNDFYHEMTDSGVLDKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILM 246
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E ++ +++I +
Sbjct: 247 FIDNIFRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGQL------QERITSTK 293
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 294 VGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPALDPLDSFSRQLDP 353
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + + L +Y+EL+
Sbjct: 354 QIVGQEHYDVARSC----QKTLQRYKELQ 378
>gi|349575688|ref|ZP_08887595.1| ATP synthase F1 sector beta subunit [Neisseria shayeganii 871]
gi|348012697|gb|EGY51637.1| ATP synthase F1 sector beta subunit [Neisseria shayeganii 871]
Length = 465
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 236/338 (69%), Positives = 279/338 (82%), Gaps = 6/338 (1%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T+G+KR V +TG PI PVG TLGRI++VLG P+D G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTDGLKRGLAVQNTGAPITVPVGQATLGRIMDVLGKPVDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
IN+ + IH PKF +LETGIKVIDLLCPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 INADQTRAIHQPAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFYHEMK+SNVLDKV+++YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
LTGLS+AE FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 220 LTGLSMAEHFRDEKDASGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 279
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG+LQERI+ST+ G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+
Sbjct: 280 MGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAV 339
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP ++G+EHY VA V+ LQKYKEL+D
Sbjct: 340 DPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRD 377
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 152/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G+ +D + + AP +
Sbjct: 60 GLKRGLAVQNTGAPITVPVGQATLGRIMDVLGKPVDEAGPINADQTRAIHQPAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 STTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG ++ E+FRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLSMAEHFRDEKDASGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|299065197|emb|CBJ36363.1| ATP synthase, F1 sector, beta subunit [Ralstonia solanacearum
CMR15]
Length = 467
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V +TG PI PVG TLGRI++VLG PID G
Sbjct: 48 EVQQQLGDGVVRTIALGSSDGLRRGMPVSNTGAPISVPVGHGTLGRIMDVLGRPIDEAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + +K IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IAADEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG EHY+VA+ VK LQ+YKEL+D
Sbjct: 348 SRQLDPQVVGTEHYEVADRVKKTLQRYKELRD 379
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 158/387 (40%), Gaps = 39/387 (10%)
Query: 132 RCLNQTLNIKFANNTV------LSGQINGTTGYEEAA---------AQGFV-AVLIDDLK 175
+C+ ++I+F + + L Q +G + E G V + +
Sbjct: 8 QCIGAVVDIQFPRDAMPKVYDALELQDSGEASFAEKGLTFEVQQQLGDGVVRTIALGSSD 67
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID + + + AP +
Sbjct: 68 GLRRGMPVSNTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIAADEKRAIHQKAPKFDELS 127
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 128 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 187
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 188 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 247
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 248 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 294
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 295 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQ 354
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y++ + ++ L +Y+EL
Sbjct: 355 VVGTEHYEVADR----VKKTLQRYKEL 377
>gi|83746948|ref|ZP_00943994.1| ATP synthase beta chain [Ralstonia solanacearum UW551]
gi|300702513|ref|YP_003744113.1| ATP synthase, f1 sector subunit beta [Ralstonia solanacearum
CFBP2957]
gi|83726368|gb|EAP73500.1| ATP synthase beta chain [Ralstonia solanacearum UW551]
gi|299070174|emb|CBJ41465.1| ATP synthase, F1 sector, beta subunit [Ralstonia solanacearum
CFBP2957]
Length = 469
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V +TG PI PVG TLGRI++VLG PID G
Sbjct: 50 EVQQQLGDGVVRTIALGSSDGLRRGMRVANTGAPISVPVGHGTLGRIMDVLGRPIDEAGP 109
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++K IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 110 IACEEKRGIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 169
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 170 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 229
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 230 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 289
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 290 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 349
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY+VA+ VK LQ+YKEL+D
Sbjct: 350 SRQLDPQVVGQEHYEVADRVKKTLQRYKELRD 381
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG LGRI++ G ID + + + + AP +
Sbjct: 70 GLRRGMRVANTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIACEEKRGIHQKAPKFDELS 129
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 130 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 189
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 190 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 249
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 250 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 296
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 297 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQ 356
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y++ + ++ L +Y+EL
Sbjct: 357 VVGQEHYEVADR----VKKTLQRYKEL 379
>gi|384124213|ref|YP_005506833.1| ATP synthase subunit beta protein [Yersinia pestis D106004]
gi|384128081|ref|YP_005510695.1| ATP synthase subunit beta protein [Yersinia pestis D182038]
gi|420549372|ref|ZP_15047092.1| ATP synthase F1, beta subunit [Yersinia pestis PY-01]
gi|420554722|ref|ZP_15051863.1| ATP synthase F1, beta subunit [Yersinia pestis PY-02]
gi|420560356|ref|ZP_15056745.1| ATP synthase F1, beta subunit [Yersinia pestis PY-03]
gi|420565721|ref|ZP_15061582.1| ATP synthase F1, beta subunit [Yersinia pestis PY-04]
gi|420576419|ref|ZP_15071274.1| ATP synthase F1, beta subunit [Yersinia pestis PY-06]
gi|420581703|ref|ZP_15076087.1| ATP synthase F1, beta subunit [Yersinia pestis PY-07]
gi|420587125|ref|ZP_15080992.1| ATP synthase F1, beta subunit [Yersinia pestis PY-08]
gi|420592210|ref|ZP_15085562.1| ATP synthase F1, beta subunit [Yersinia pestis PY-09]
gi|420597559|ref|ZP_15090370.1| ATP synthase F1, beta subunit [Yersinia pestis PY-10]
gi|420603287|ref|ZP_15095453.1| ATP synthase F1, beta subunit [Yersinia pestis PY-11]
gi|420608671|ref|ZP_15100345.1| ATP synthase F1, beta subunit [Yersinia pestis PY-12]
gi|420614054|ref|ZP_15105163.1| ATP synthase F1, beta subunit [Yersinia pestis PY-13]
gi|420619433|ref|ZP_15109839.1| ATP synthase F1, beta subunit [Yersinia pestis PY-14]
gi|420645587|ref|ZP_15133508.1| ATP synthase F1, beta subunit [Yersinia pestis PY-29]
gi|420650922|ref|ZP_15138305.1| ATP synthase F1, beta subunit [Yersinia pestis PY-32]
gi|420656522|ref|ZP_15143351.1| ATP synthase F1, beta subunit [Yersinia pestis PY-34]
gi|420672192|ref|ZP_15157474.1| ATP synthase F1, beta subunit [Yersinia pestis PY-45]
gi|420683110|ref|ZP_15167357.1| ATP synthase F1, beta subunit [Yersinia pestis PY-47]
gi|420699494|ref|ZP_15181804.1| ATP synthase F1, beta subunit [Yersinia pestis PY-53]
gi|420716171|ref|ZP_15196077.1| ATP synthase F1, beta subunit [Yersinia pestis PY-56]
gi|420727146|ref|ZP_15205617.1| ATP synthase F1, beta subunit [Yersinia pestis PY-59]
gi|420732658|ref|ZP_15210578.1| ATP synthase F1, beta subunit [Yersinia pestis PY-60]
gi|420737629|ref|ZP_15215065.1| ATP synthase F1, beta subunit [Yersinia pestis PY-61]
gi|420749039|ref|ZP_15224949.1| ATP synthase F1, beta subunit [Yersinia pestis PY-64]
gi|420770654|ref|ZP_15243738.1| ATP synthase F1, beta subunit [Yersinia pestis PY-72]
gi|420775622|ref|ZP_15248248.1| ATP synthase F1, beta subunit [Yersinia pestis PY-76]
gi|420791891|ref|ZP_15262623.1| ATP synthase F1, beta subunit [Yersinia pestis PY-90]
gi|420802566|ref|ZP_15272216.1| ATP synthase F1, beta subunit [Yersinia pestis PY-92]
gi|420807896|ref|ZP_15277053.1| ATP synthase F1, beta subunit [Yersinia pestis PY-93]
gi|420813326|ref|ZP_15281900.1| ATP synthase F1, beta subunit [Yersinia pestis PY-94]
gi|420818755|ref|ZP_15286841.1| ATP synthase F1, beta subunit [Yersinia pestis PY-95]
gi|420829182|ref|ZP_15296197.1| ATP synthase F1, beta subunit [Yersinia pestis PY-98]
gi|420834801|ref|ZP_15301265.1| ATP synthase F1, beta subunit [Yersinia pestis PY-99]
gi|420856331|ref|ZP_15320332.1| ATP synthase F1, beta subunit [Yersinia pestis PY-103]
gi|420861392|ref|ZP_15324822.1| ATP synthase F1, beta subunit [Yersinia pestis PY-113]
gi|262363809|gb|ACY60530.1| ATP synthase beta subunit protein [Yersinia pestis D106004]
gi|262367745|gb|ACY64302.1| ATP synthase beta subunit protein [Yersinia pestis D182038]
gi|391420219|gb|EIQ83027.1| ATP synthase F1, beta subunit [Yersinia pestis PY-01]
gi|391420251|gb|EIQ83058.1| ATP synthase F1, beta subunit [Yersinia pestis PY-02]
gi|391420302|gb|EIQ83108.1| ATP synthase F1, beta subunit [Yersinia pestis PY-03]
gi|391435318|gb|EIQ96387.1| ATP synthase F1, beta subunit [Yersinia pestis PY-04]
gi|391440042|gb|EIR00646.1| ATP synthase F1, beta subunit [Yersinia pestis PY-06]
gi|391452418|gb|EIR11822.1| ATP synthase F1, beta subunit [Yersinia pestis PY-08]
gi|391452460|gb|EIR11863.1| ATP synthase F1, beta subunit [Yersinia pestis PY-07]
gi|391454133|gb|EIR13373.1| ATP synthase F1, beta subunit [Yersinia pestis PY-09]
gi|391468017|gb|EIR25928.1| ATP synthase F1, beta subunit [Yersinia pestis PY-10]
gi|391468844|gb|EIR26683.1| ATP synthase F1, beta subunit [Yersinia pestis PY-11]
gi|391470328|gb|EIR28007.1| ATP synthase F1, beta subunit [Yersinia pestis PY-12]
gi|391484248|gb|EIR40533.1| ATP synthase F1, beta subunit [Yersinia pestis PY-13]
gi|391485381|gb|EIR41528.1| ATP synthase F1, beta subunit [Yersinia pestis PY-14]
gi|391516642|gb|EIR69513.1| ATP synthase F1, beta subunit [Yersinia pestis PY-29]
gi|391517278|gb|EIR70098.1| ATP synthase F1, beta subunit [Yersinia pestis PY-34]
gi|391517790|gb|EIR70559.1| ATP synthase F1, beta subunit [Yersinia pestis PY-32]
gi|391535687|gb|EIR86743.1| ATP synthase F1, beta subunit [Yersinia pestis PY-45]
gi|391549014|gb|EIR98754.1| ATP synthase F1, beta subunit [Yersinia pestis PY-47]
gi|391565030|gb|EIS13182.1| ATP synthase F1, beta subunit [Yersinia pestis PY-53]
gi|391580274|gb|EIS26293.1| ATP synthase F1, beta subunit [Yersinia pestis PY-56]
gi|391594310|gb|EIS38476.1| ATP synthase F1, beta subunit [Yersinia pestis PY-60]
gi|391594934|gb|EIS39032.1| ATP synthase F1, beta subunit [Yersinia pestis PY-59]
gi|391608941|gb|EIS51387.1| ATP synthase F1, beta subunit [Yersinia pestis PY-61]
gi|391609949|gb|EIS52295.1| ATP synthase F1, beta subunit [Yersinia pestis PY-64]
gi|391634195|gb|EIS73498.1| ATP synthase F1, beta subunit [Yersinia pestis PY-72]
gi|391644631|gb|EIS82606.1| ATP synthase F1, beta subunit [Yersinia pestis PY-76]
gi|391657679|gb|EIS94168.1| ATP synthase F1, beta subunit [Yersinia pestis PY-90]
gi|391674372|gb|EIT08982.1| ATP synthase F1, beta subunit [Yersinia pestis PY-93]
gi|391674584|gb|EIT09175.1| ATP synthase F1, beta subunit [Yersinia pestis PY-94]
gi|391674724|gb|EIT09309.1| ATP synthase F1, beta subunit [Yersinia pestis PY-92]
gi|391688586|gb|EIT21787.1| ATP synthase F1, beta subunit [Yersinia pestis PY-95]
gi|391692262|gb|EIT25121.1| ATP synthase F1, beta subunit [Yersinia pestis PY-98]
gi|391705788|gb|EIT37295.1| ATP synthase F1, beta subunit [Yersinia pestis PY-99]
gi|391721646|gb|EIT51549.1| ATP synthase F1, beta subunit [Yersinia pestis PY-103]
gi|391722527|gb|EIT52321.1| ATP synthase F1, beta subunit [Yersinia pestis PY-113]
Length = 435
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G+ R V + PI PVG TLGRI+NVLG+PID KG
Sbjct: 17 EVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGP 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + ++LETGIKV+DL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G K E E+PVG LGRI+N GE ID K + R + + AP +
Sbjct: 37 GLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELA 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S + L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 SSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 217 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDVARG----VQSILQRYQELK 347
>gi|400405598|ref|YP_006588457.1| ATP synthase F1 subunit beta [secondary endosymbiont of
Ctenarytaina eucalypti]
gi|400363961|gb|AFP85029.1| ATP synthase, F1 beta subunit [secondary endosymbiont of
Ctenarytaina eucalypti]
Length = 460
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+V+QQ+G +VR IA G+++G++R +V D I PVG TLGRI+NVLG+P+D KG
Sbjct: 42 EVEQQLGGGVVRCIAMGSSDGLRRGLMVTDLEHAIEVPVGKATLGRIMNVLGEPVDMKGS 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
IN++++ IH LPP + + ++L TGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 INTEERWSIHRLPPTYEELAISQDLLATGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ++NV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDANVIDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYP++DPL S
Sbjct: 282 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPSVDPLNST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLD +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 342 SRQLDRLVVGQEHYDVARGVQSILQRYQELKD 373
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + R ++ ++ P +
Sbjct: 62 GLRRGLMVTDLEHAIEVPVGKATLGRIMNVLGEPVDMKGSINTEERWSIHRLPPTYEELA 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 ISQDLLATGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDANVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + P+++ S SR
Sbjct: 289 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPSVDPLNSTSRQLDRL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|225024609|ref|ZP_03713801.1| hypothetical protein EIKCOROL_01486 [Eikenella corrodens ATCC
23834]
gi|224942623|gb|EEG23832.1| hypothetical protein EIKCOROL_01486 [Eikenella corrodens ATCC
23834]
Length = 465
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/365 (65%), Positives = 289/365 (79%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + + L + +VQQQ+G+ +VRTIA G+T+G+KR V +TG
Sbjct: 13 VVDVEFPRTAIPRVYDALKLVDTDLTLEVQQQLGDGVVRTIAMGSTDGLKRGLAVQNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG+P+D +G I S + IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKATLGRIMDVLGNPVDEQGPIGSDQTRAIHQFAPKFDELSSTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGLS+AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLSMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 152/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G +D + + + AP +
Sbjct: 60 GLKRGLAVQNTGAPITVPVGKATLGRIMDVLGNPVDEQGPIGSDQTRAIHQFAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 STTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG ++ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLSMAEYFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKMTVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|187930577|ref|YP_001901064.1| F0F1 ATP synthase subunit beta [Ralstonia pickettii 12J]
gi|187727467|gb|ACD28632.1| ATP synthase F1, beta subunit [Ralstonia pickettii 12J]
Length = 469
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG PI PVG TLGRI++VLG PID G
Sbjct: 50 EVQQQLGDGVVRTIALGSSDGLRRGMRVATTGAPISVPVGHGTLGRIMDVLGRPIDEAGP 109
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +K IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 110 IACDEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 169
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 170 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 229
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 230 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 289
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 290 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 349
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY+VA+ VK LQ+YKEL+D
Sbjct: 350 SRQLDPQVVGQEHYEVADRVKKTLQRYKELRD 381
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 139/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG LGRI++ G ID + + + AP +
Sbjct: 70 GLRRGMRVATTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIACDEKRAIHQKAPKFDELS 129
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 130 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 189
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 190 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 249
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 250 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 296
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 297 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQ 356
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y++ + ++ L +Y+EL
Sbjct: 357 VVGQEHYEVADR----VKKTLQRYKEL 379
>gi|91777094|ref|YP_546850.1| ATP synthase F1, alpha subunit [Methylobacillus flagellatus KT]
gi|118573482|sp|Q1GXM8.1|ATPA_METFK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|91711081|gb|ABE51009.1| ATP synthase F1 subcomplex alpha subunit [Methylobacillus
flagellatus KT]
Length = 513
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 231/404 (57%), Positives = 311/404 (76%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +N+++G CT +I E+PVG EL+GR+VN+ G+ ID K K + +EK+
Sbjct: 73 AVILGDYENISEGDTVKCTGRILEVPVGPELVGRVVNALGQPIDGKGPINAKLTDKIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TGIK+IDSM+P+G+GQRELIIGDRQTGKT +A+D IINQK +N+
Sbjct: 133 APGVIARKSVSQPVQTGIKAIDSMVPVGRGQRELIIGDRQTGKTAVAVDAIINQKGQNMT 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S++ NV+ KL+ + M+YT+VVAA+A+D AA Q+++PY GCT+GEYFRD
Sbjct: 193 CIYVAIGQKASTIANVVRKLEEHGAMEYTIVVAASASDPAALQFLAPYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFY+HSRLLER++++N+ ++EK
Sbjct: 253 GQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYIHSRLLERAARVNEEYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TNGEVKGKTGSLTALPIIETAAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKL G +R+ LAQYREL +F++F+SDLD VT+ QL G ++ LMK
Sbjct: 373 SVSRVGGAAQTKVIKKLGGGVRLALAQYRELAAFAQFASDLDEVTRKQLDRGRLVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q + S E+ + LL FF +P+ + FE + + +
Sbjct: 433 QAQYAPLSTSEMAVTLLAANKGFFDDVPVARALAFESALHSFLK 476
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 154/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ I V TG+ + PVG +GR++N LG PID KG IN+K I
Sbjct: 71 VGAVILGDYENISEGDTVKCTGRILEVPVGPELVGRVVNALGQPIDGKGPINAKLTDKIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TGIK ID + P +G + + G GKT ++ I N ++
Sbjct: 131 KVAPGVIARKSVSQPVQTGIKAIDSMVPVGRGQRELIIGDRQTGKTAVAVDAIINQKGQN 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ + +++E ++ ++ ++P+ + G ++ E F
Sbjct: 191 MTC-IYVAIGQKASTIANVVRKLEEHGAMEYTIVVAASASDPAALQFLAPYAGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 250 RDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYIHSRLLERAARVNEEYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 310 EKFTNGEVKGKTGSLTALPIIETAAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G KV + V+ L +Y+EL
Sbjct: 370 AGISVSR-----VGGAAQTKVIKKLGGGVRLALAQYREL 403
>gi|127514770|ref|YP_001095967.1| F0F1 ATP synthase subunit beta [Shewanella loihica PV-4]
gi|190358704|sp|A3QJR0.1|ATPB_SHELP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|126640065|gb|ABO25708.1| ATP synthase F1, beta subunit [Shewanella loihica PV-4]
Length = 458
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 237/359 (66%), Positives = 291/359 (81%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + + + + +K+ + +VQQQ+G +VRTIA G+++G++R VV+TG
Sbjct: 13 VVDVEFPHDAVPQVYDALEIKSEGLVLEVQQQLGGGVVRTIAMGSSDGLRRGIEVVNTGS 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI+NVLG P+D G I ++ IH P + +Q +LETGIKVI
Sbjct: 73 PITVPVGSATLGRIMNVLGQPVDEAGPIGEDERYVIHREAPSYEDQSNTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFY+EM
Sbjct: 133 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYYEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTE 793
+ES VLDKV+++YGQMNEP GNRLRVALTGL++AE+FR+ GKDVLLF+DNIYR+TLAGTE
Sbjct: 193 EESGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLLFVDNIYRYTLAGTE 252
Query: 794 VSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFT 853
VSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF
Sbjct: 253 VSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFA 312
Query: 854 HLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY VA+ V+ LQ+YKELKD
Sbjct: 313 HLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVASGVQNVLQRYKELKD 371
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG LGRI+N G+ +D R + + AP D+
Sbjct: 60 GLRRGIEVVNTGSPITVPVGSATLGRIMNVLGQPVDEAGPIGEDERYVIHREAPSYEDQS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 NTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ +D +V + + TG T+ E FRD G+D L+
Sbjct: 180 ERTREGNDFYYEMEESGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLLF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPQ 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 347 VVGQEHYDV----ASGVQNVLQRYKELK 370
>gi|347541523|ref|YP_004848949.1| ATP synthase F1 subunit beta [Pseudogulbenkiania sp. NH8B]
gi|345644702|dbj|BAK78535.1| ATP synthase F1, beta subunit [Pseudogulbenkiania sp. NH8B]
Length = 464
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 238/366 (65%), Positives = 289/366 (78%), Gaps = 6/366 (1%)
Query: 553 PIKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTG 612
P+ +E + + + + L + +VQQQ+G+ +VRTIA G+++G+KR VV+TG
Sbjct: 12 PVLDVEFPRDAMPRVYDALKLVDTDLTLEVQQQLGDGVVRTIAMGSSDGLKRGMAVVNTG 71
Query: 613 KPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKV 672
I PVG TLGRI++VLG+P+D G + + + IH PKF +LETGIKV
Sbjct: 72 AAISVPVGAATLGRIMDVLGNPVDEAGPVATDARRAIHQPAPKFDELSSATELLETGIKV 131
Query: 673 IDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHE 732
IDLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHE
Sbjct: 132 IDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHE 191
Query: 733 MKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYR 786
MK+SNVLDKV+++YGQMNEP GNRLRVALTGLS+AE FR+ G+DVL F+DNIYR
Sbjct: 192 MKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLSMAEHFRDEKDENGKGRDVLFFVDNIYR 251
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 252 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKEGSITSIQAVYVPADDLTDP 311
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQK
Sbjct: 312 SPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGDEHYSVARGVQTTLQK 371
Query: 907 YKELKD 912
YKEL+D
Sbjct: 372 YKELRD 377
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 138/333 (41%), Gaps = 29/333 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G +D R + + AP +
Sbjct: 60 GLKRGMAVVNTGAAISVPVGAATLGRIMDVLGNPVDEAGPVATDARRAIHQPAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 SATELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG ++ E+FRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLSMAEHFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
R V G Y + + ++ L +Y+EL
Sbjct: 347 RQLDPLVVGDEHYSVARG----VQTTLQKYKEL 375
>gi|377822094|ref|YP_004978465.1| ATP synthase F1 subunit beta [Burkholderia sp. YI23]
gi|357936929|gb|AET90488.1| ATP synthase F1, beta subunit [Burkholderia sp. YI23]
Length = 464
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/356 (67%), Positives = 288/356 (80%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + + L+ +VQQQ+G+ +VRTI G ++G++R T+V +TGKPI
Sbjct: 21 VEFPRAEMPKIYDALILEGTELTLEVQQQLGDGVVRTICLGASDGLRRGTVVKNTGKPIS 80
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G I S+ IH P F + + +LETGIKVIDL+
Sbjct: 81 VPVGKPTLGRIMDVLGRPIDEAGPITSETTRSIHQKAPSFEDLSPSTELLETGIKVIDLI 140
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 141 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 200
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA
Sbjct: 201 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSA 260
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMGKLQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 261 LLGRMPSAVGYQPTLAEEMGKLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLD 320
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+Q+DP+++GEEHY + V+ LQ+YKEL+D
Sbjct: 321 ATVVLSRDIASLGIYPAVDPLDSTSRQIDPHVIGEEHYSITRGVQQTLQRYKELRD 376
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 137/327 (41%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID + ++ + AP D
Sbjct: 65 GLRRGTVVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPITSETTRSIHQKAPSFEDLS 124
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 125 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 184
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 185 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 244
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 245 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 291
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 292 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPH 351
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y I + ++ L +Y+EL
Sbjct: 352 VIGEEHYSITR----GVQQTLQRYKEL 374
>gi|162286755|ref|YP_001083240.2| F0F1 ATP synthase subunit beta [Acinetobacter baumannii ATCC 17978]
gi|169632167|ref|YP_001705903.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii SDF]
gi|169797644|ref|YP_001715437.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AYE]
gi|184156498|ref|YP_001844837.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii ACICU]
gi|213155562|ref|YP_002317607.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AB0057]
gi|215484998|ref|YP_002327239.1| ATP synthase F1, beta subunit [Acinetobacter baumannii AB307-0294]
gi|239503042|ref|ZP_04662352.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AB900]
gi|260557587|ref|ZP_05829801.1| ATP synthase F1, beta subunit [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|301345728|ref|ZP_07226469.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AB056]
gi|301512770|ref|ZP_07238007.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AB058]
gi|301594499|ref|ZP_07239507.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AB059]
gi|332852654|ref|ZP_08434308.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6013150]
gi|332869370|ref|ZP_08438748.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6013113]
gi|332875632|ref|ZP_08443444.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6014059]
gi|384130147|ref|YP_005512759.1| atpD [Acinetobacter baumannii 1656-2]
gi|384141428|ref|YP_005524138.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii MDR-ZJ06]
gi|385235727|ref|YP_005797066.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii
TCDC-AB0715]
gi|387125614|ref|YP_006291496.1| ATP synthase F1 subunit beta [Acinetobacter baumannii MDR-TJ]
gi|403673541|ref|ZP_10935836.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. NCTC 10304]
gi|407931066|ref|YP_006846709.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii TYTH-1]
gi|416146401|ref|ZP_11601105.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AB210]
gi|417547325|ref|ZP_12198411.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC032]
gi|417548327|ref|ZP_12199408.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-18]
gi|417553689|ref|ZP_12204758.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-81]
gi|417561970|ref|ZP_12212849.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC137]
gi|417566412|ref|ZP_12217284.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC143]
gi|417570844|ref|ZP_12221701.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC189]
gi|417575184|ref|ZP_12226037.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Canada BC-5]
gi|417576729|ref|ZP_12227574.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-17]
gi|417870141|ref|ZP_12515112.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii ABNIH1]
gi|417875952|ref|ZP_12520748.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii ABNIH2]
gi|417877293|ref|ZP_12522018.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii ABNIH3]
gi|417883959|ref|ZP_12528168.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii ABNIH4]
gi|421199946|ref|ZP_15657107.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC109]
gi|421201891|ref|ZP_15659045.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AC12]
gi|421456832|ref|ZP_15906170.1| ATP synthase F1, beta subunit [Acinetobacter baumannii IS-123]
gi|421534169|ref|ZP_15980445.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AC30]
gi|421622539|ref|ZP_16063440.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC074]
gi|421624428|ref|ZP_16065300.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC098]
gi|421631486|ref|ZP_16072155.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC180]
gi|421633219|ref|ZP_16073857.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-13]
gi|421642146|ref|ZP_16082673.1| ATP synthase F1, beta subunit [Acinetobacter baumannii IS-235]
gi|421646587|ref|ZP_16087034.1| ATP synthase F1, beta subunit [Acinetobacter baumannii IS-251]
gi|421650608|ref|ZP_16090982.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC0162]
gi|421656902|ref|ZP_16097189.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-72]
gi|421657849|ref|ZP_16098096.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-83]
gi|421663421|ref|ZP_16103569.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC110]
gi|421666520|ref|ZP_16106610.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC087]
gi|421672011|ref|ZP_16111978.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC099]
gi|421672965|ref|ZP_16112916.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC065]
gi|421679012|ref|ZP_16118892.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC111]
gi|421689101|ref|ZP_16128787.1| ATP synthase F1, beta subunit [Acinetobacter baumannii IS-143]
gi|421690046|ref|ZP_16129718.1| ATP synthase F1, beta subunit [Acinetobacter baumannii IS-116]
gi|421697320|ref|ZP_16136884.1| ATP synthase F1, beta subunit [Acinetobacter baumannii WC-692]
gi|421700841|ref|ZP_16140353.1| ATP synthase F1, beta subunit [Acinetobacter baumannii IS-58]
gi|421701777|ref|ZP_16141266.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii ZWS1122]
gi|421705589|ref|ZP_16145015.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii ZWS1219]
gi|421788381|ref|ZP_16224683.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-82]
gi|421793771|ref|ZP_16229887.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-2]
gi|421798514|ref|ZP_16234535.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-21]
gi|421801927|ref|ZP_16237882.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Canada BC1]
gi|421805275|ref|ZP_16241164.1| ATP synthase F1, beta subunit [Acinetobacter baumannii WC-A-694]
gi|421810089|ref|ZP_16245915.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC035]
gi|424054080|ref|ZP_17791610.1| ATP synthase subunit beta [Acinetobacter baumannii Ab11111]
gi|424061507|ref|ZP_17798996.1| ATP synthase subunit beta [Acinetobacter baumannii Ab33333]
gi|424065165|ref|ZP_17802649.1| ATP synthase subunit beta [Acinetobacter baumannii Ab44444]
gi|425750619|ref|ZP_18868580.1| ATP synthase F1, beta subunit [Acinetobacter baumannii WC-348]
gi|425753588|ref|ZP_18871471.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-113]
gi|445398279|ref|ZP_21429571.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-57]
gi|445444072|ref|ZP_21442793.1| ATP synthase F1, beta subunit [Acinetobacter baumannii WC-A-92]
gi|445459462|ref|ZP_21447568.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC047]
gi|445464636|ref|ZP_21449688.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC338]
gi|445483002|ref|ZP_21456340.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-78]
gi|445491667|ref|ZP_21459898.1| ATP synthase F1, beta subunit [Acinetobacter baumannii AA-014]
gi|190358287|sp|A3M144.2|ATPB_ACIBT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226739963|sp|B7H294.1|ATPB_ACIB3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226739964|sp|B7I1W4.1|ATPB_ACIB5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226739965|sp|B2I102.1|ATPB_ACIBC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226739966|sp|B0VNK4.1|ATPB_ACIBS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226739967|sp|B0VBP3.1|ATPB_ACIBY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|169150571|emb|CAM88480.1| membrane-bound ATP synthase , F1 sector, beta-subunit
[Acinetobacter baumannii AYE]
gi|169150959|emb|CAO99574.1| membrane-bound ATP synthase , F1 sector, beta-subunit
[Acinetobacter baumannii]
gi|183208092|gb|ACC55490.1| F0F1-type ATP synthase, beta subunit [Acinetobacter baumannii
ACICU]
gi|193076046|gb|ABO10638.2| membrane-bound ATP synthase F1 sector, beta-subunit [Acinetobacter
baumannii ATCC 17978]
gi|213054722|gb|ACJ39624.1| ATP synthase F1, beta subunit [Acinetobacter baumannii AB0057]
gi|213988424|gb|ACJ58723.1| ATP synthase F1, beta subunit [Acinetobacter baumannii AB307-0294]
gi|260408760|gb|EEX02064.1| ATP synthase F1, beta subunit [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|322506367|gb|ADX01821.1| atpD [Acinetobacter baumannii 1656-2]
gi|323516235|gb|ADX90616.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii
TCDC-AB0715]
gi|332729122|gb|EGJ60469.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6013150]
gi|332732788|gb|EGJ64004.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6013113]
gi|332736205|gb|EGJ67220.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6014059]
gi|333366115|gb|EGK48129.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AB210]
gi|342224279|gb|EGT89322.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii ABNIH2]
gi|342228534|gb|EGT93419.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii ABNIH1]
gi|342234855|gb|EGT99488.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii ABNIH4]
gi|342236105|gb|EGU00648.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii ABNIH3]
gi|347591921|gb|AEP04642.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii MDR-ZJ06]
gi|385880106|gb|AFI97201.1| ATP synthase, F1 beta subunit [Acinetobacter baumannii MDR-TJ]
gi|395524552|gb|EJG12641.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC137]
gi|395551292|gb|EJG17301.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC189]
gi|395552084|gb|EJG18092.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC143]
gi|395564943|gb|EJG26594.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC109]
gi|395569950|gb|EJG30612.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-17]
gi|398328499|gb|EJN44623.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AC12]
gi|400205917|gb|EJO36897.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Canada BC-5]
gi|400210536|gb|EJO41505.1| ATP synthase F1, beta subunit [Acinetobacter baumannii IS-123]
gi|400385213|gb|EJP43891.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC032]
gi|400388626|gb|EJP51698.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-18]
gi|400390106|gb|EJP57153.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-81]
gi|404558536|gb|EKA63818.1| ATP synthase F1, beta subunit [Acinetobacter baumannii WC-692]
gi|404558993|gb|EKA64266.1| ATP synthase F1, beta subunit [Acinetobacter baumannii IS-143]
gi|404565009|gb|EKA70183.1| ATP synthase F1, beta subunit [Acinetobacter baumannii IS-116]
gi|404569126|gb|EKA74220.1| ATP synthase F1, beta subunit [Acinetobacter baumannii IS-58]
gi|404666384|gb|EKB34331.1| ATP synthase subunit beta [Acinetobacter baumannii Ab33333]
gi|404666635|gb|EKB34566.1| ATP synthase subunit beta [Acinetobacter baumannii Ab11111]
gi|404672615|gb|EKB40430.1| ATP synthase subunit beta [Acinetobacter baumannii Ab44444]
gi|407195627|gb|EKE66756.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii ZWS1219]
gi|407195930|gb|EKE67051.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii ZWS1122]
gi|407899647|gb|AFU36478.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii TYTH-1]
gi|408503017|gb|EKK04794.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-72]
gi|408509855|gb|EKK11522.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC0162]
gi|408513878|gb|EKK15491.1| ATP synthase F1, beta subunit [Acinetobacter baumannii IS-235]
gi|408517410|gb|EKK18953.1| ATP synthase F1, beta subunit [Acinetobacter baumannii IS-251]
gi|408692758|gb|EKL38372.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC180]
gi|408694891|gb|EKL40451.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC074]
gi|408701604|gb|EKL47029.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC098]
gi|408706894|gb|EKL52191.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-13]
gi|408711450|gb|EKL56657.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-83]
gi|408713526|gb|EKL58693.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC110]
gi|409987793|gb|EKO43970.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AC30]
gi|410380945|gb|EKP33521.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC099]
gi|410387554|gb|EKP39999.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC087]
gi|410387890|gb|EKP40331.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC065]
gi|410391703|gb|EKP44069.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC111]
gi|410394106|gb|EKP46445.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-21]
gi|410396012|gb|EKP48296.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-2]
gi|410403222|gb|EKP55320.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-82]
gi|410404741|gb|EKP56803.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Canada BC1]
gi|410409088|gb|EKP61022.1| ATP synthase F1, beta subunit [Acinetobacter baumannii WC-A-694]
gi|410413434|gb|EKP65261.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC035]
gi|425485797|gb|EKU52178.1| ATP synthase F1, beta subunit [Acinetobacter baumannii WC-348]
gi|425497911|gb|EKU64001.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-113]
gi|444762021|gb|ELW86393.1| ATP synthase F1, beta subunit [Acinetobacter baumannii WC-A-92]
gi|444764205|gb|ELW88528.1| ATP synthase F1, beta subunit [Acinetobacter baumannii AA-014]
gi|444768942|gb|ELW93142.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-78]
gi|444773905|gb|ELW97995.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC047]
gi|444779524|gb|ELX03507.1| ATP synthase F1, beta subunit [Acinetobacter baumannii OIFC338]
gi|444783784|gb|ELX07622.1| ATP synthase F1, beta subunit [Acinetobacter baumannii Naval-57]
gi|452949973|gb|EME55438.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii MSP4-16]
Length = 464
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 237/362 (65%), Positives = 291/362 (80%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + + + +VQQQ+G+ +VRTIA G+T G+KR V T PI
Sbjct: 16 VEFERTSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLTVTSTNAPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G + ++++ PIH P ++ Q + ++LETGIKVIDLL
Sbjct: 76 VPVGTATLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLETGIKVIDLL 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
NVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLA 255
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+T
Sbjct: 256 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPAT 315
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLD+T+VLSR IA GIYPAIDPL+S S+QLDP +VG+EHY++A V+ LQ+YKEL
Sbjct: 316 TFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARAVQNVLQRYKEL 375
Query: 911 KD 912
KD
Sbjct: 376 KD 377
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 171/397 (43%), Gaps = 35/397 (8%)
Query: 151 QINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSK 206
Q++GT E Q G V + + + L +G T +PVG LGRI++
Sbjct: 31 QVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLTVTSTNAPISVPVGTATLGRIMDVL 90
Query: 207 GEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDR 266
G ID + R + + AP ++ + + L TGIK ID + P KG + + G
Sbjct: 91 GRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLETGIKVIDLLCPFAKGGKVGLFGGA 150
Query: 267 QTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAAD 325
GKT ++ I N K + + ++ +G++ + +++K N +D +V +
Sbjct: 151 GVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNE 210
Query: 326 SAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGRE 379
+ TG T+ EYFRD G+D L+ D++ ++ A ++S LL R
Sbjct: 211 PPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAGTEVSALLGR----- 265
Query: 380 AFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVI 439
P V Y + + + + +++I + +G++T+ + D+T P
Sbjct: 266 -MPSAVGY-------QPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTF 317
Query: 440 SITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYR 494
+ D + L ++ +S PAI+ S SR V G Y+I + ++ +L +Y+
Sbjct: 318 AHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARA----VQNVLQRYK 373
Query: 495 ELESFSKFSSDLDIVTKTQL--YNGEKISLLMKQKPH 529
EL+ ++ + +L Y KI Q H
Sbjct: 374 ELKDIIAILGMDELAEEDKLVVYRARKIQRFFSQPFH 410
>gi|112791370|gb|ABI21955.1| ATP synthase beta subunit, partial [Brenneria alni]
Length = 421
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G++R V + G I PVG TLGRI+NVLGDP+D KG+
Sbjct: 17 EVQQQLGGGVVRCIAMGSSDGLRRGLNVTNLGHAIEVPVGKATLGRIMNVLGDPVDMKGD 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRPAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+++ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSILQRFQELKD 348
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 138/313 (44%), Gaps = 23/313 (7%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDS 250
E+PVG LGRI+N G+ +D K + R + + AP + + E L TGIK ID
Sbjct: 52 EVPVGKATLGRIMNVLGDPVDMKGDIGEEERWAIHRPAPSYEELSNSQELLETGIKVIDL 111
Query: 251 MIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKY 309
M P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 112 MCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTD 171
Query: 310 YNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQIS 369
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++S
Sbjct: 172 SNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVS 231
Query: 370 LLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGD 429
LL R P + + + + + +++I + G++T+ + D
Sbjct: 232 ALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKTGSITSVQAVYVPADD 278
Query: 430 VTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSG 484
+T P + D + L + + PA++ S SR V G Y + +
Sbjct: 279 LTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARG--- 335
Query: 485 DIRIMLAQYRELE 497
++ +L +++EL+
Sbjct: 336 -VQSILQRFQELK 347
>gi|294505644|ref|YP_003569706.1| ATP synthase subunit beta protein [Yersinia pestis Z176003]
gi|294356103|gb|ADE66444.1| ATP synthase beta subunit protein [Yersinia pestis Z176003]
Length = 447
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G+ R V + PI PVG TLGRI+NVLG+PID KG
Sbjct: 29 EVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGP 88
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + ++LETGIKV+DL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 89 IGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMM 148
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 149 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 208
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 209 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 268
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 269 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 328
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 329 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 360
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G K E E+PVG LGRI+N GE ID K + R + + AP +
Sbjct: 49 GLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELA 108
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S + L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 109 SSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 168
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 169 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 228
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 229 IDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 275
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 276 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 335
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 336 VVGQEHYDVARG----VQSILQRYQELK 359
>gi|422320651|ref|ZP_16401707.1| ATP synthase subunit beta [Achromobacter xylosoxidans C54]
gi|317404545|gb|EFV84952.1| ATP synthase subunit beta [Achromobacter xylosoxidans C54]
Length = 466
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG PI PVG TLGRI++VLG PID GE
Sbjct: 47 EVQQQLGDGVVRTIALGSSDGLRRGMKVAGTGAPISVPVGTGTLGRIMDVLGRPIDEAGE 106
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +K IH P+F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 107 IQHDEKRGIHQPAPRFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 166
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEM+ESNVLDKV++++GQMNEP GNRLRVA
Sbjct: 167 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVA 226
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 227 LTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 286
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 287 RITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSS 346
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY VA V+ LQ+YKEL+D
Sbjct: 347 SRQLDPQVVGEEHYAVARGVQQTLQRYKELRD 378
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 148/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T +PVG LGRI++ G ID + + + + AP +
Sbjct: 67 GLRRGMKVAGTGAPISVPVGTGTLGRIMDVLGRPIDEAGEIQHDEKRGIHQPAPRFDELS 126
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 127 PSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 186
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 187 ERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFF 246
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 247 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 293
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 294 GSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSSSRQLDPQ 353
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y + + ++ L +Y+EL +L K + KI + Q
Sbjct: 354 VVGEEHYAVARG----VQQTLQRYKELRDIIAILGMDELSPEDKQAVARARKIQRFLSQP 409
Query: 528 PH 529
H
Sbjct: 410 FH 411
>gi|120600835|ref|YP_965409.1| F0F1 ATP synthase subunit beta [Shewanella sp. W3-18-1]
gi|146295036|ref|YP_001185460.1| F0F1 ATP synthase subunit beta [Shewanella putrefaciens CN-32]
gi|386315929|ref|YP_006012094.1| ATP synthase F1 subunit beta [Shewanella putrefaciens 200]
gi|166222415|sp|A4YCH8.1|ATPB_SHEPC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|166222417|sp|A1RQB0.1|ATPB_SHESW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|120560928|gb|ABM26855.1| ATP synthase F1, beta subunit [Shewanella sp. W3-18-1]
gi|145566726|gb|ABP77661.1| ATP synthase F1, beta subunit [Shewanella putrefaciens CN-32]
gi|319428554|gb|ADV56628.1| ATP synthase F1, beta subunit [Shewanella putrefaciens 200]
Length = 463
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G+++G++R VV++G PI PVG TLGRI+NVLG+PID G
Sbjct: 44 EVQQQLGGGVVRTIAMGSSDGLRRGLEVVNSGSPISVPVGTATLGRIMNVLGEPIDEAGP 103
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 104 IGEEERYVIHRAAPSYEDQSNTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 163
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFY+EMK+S VLDKV+++YGQMNEP GNRLRVA
Sbjct: 164 ELINNIAKAHSGLSVFAGVGERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVA 223
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
L+GL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 224 LSGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 283
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 284 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 343
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VAN V+ LQ+YKELKD
Sbjct: 344 SRQLDPLVVGQEHYDVANGVQTVLQRYKELKD 375
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 153/363 (42%), Gaps = 33/363 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + +PVG LGRI+N GE ID + R + + AP D+
Sbjct: 64 GLRRGLEVVNSGSPISVPVGTATLGRIMNVLGEPIDEAGPIGEEERYVIHRAAPSYEDQS 123
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 124 NTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 183
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + +G T+ E FRD G+D L+
Sbjct: 184 ERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALSGLTMAEKFRDEGRDVLLF 243
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 244 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 290
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 291 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 350
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE------SFSKFSSDLDIVTKTQLYNGEKISLL 523
V G Y + + ++ +L +Y+EL+ + S D KT ++ KI
Sbjct: 351 VVGQEHYDV----ANGVQTVLQRYKELKDIIAILGMDELSDD----DKTTVFRARKIERF 402
Query: 524 MKQ 526
+ Q
Sbjct: 403 LSQ 405
>gi|293393689|ref|ZP_06637998.1| ATP synthase F1 sector beta subunit [Serratia odorifera DSM 4582]
gi|291423811|gb|EFE97031.1| ATP synthase F1 sector beta subunit [Serratia odorifera DSM 4582]
Length = 460
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/361 (66%), Positives = 292/361 (80%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + + K + + ++N + +VQQQ+G +VR IA G ++G++R V D
Sbjct: 13 VVDVEFPQDAVPKVYDALEVENGTETLVLEVQQQLGGGVVRCIAMGTSDGLRRGLKVNDL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
PI PVG TLGRI+NVLG PID KG+I +++ IH P + + ++LETGIK
Sbjct: 73 QHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELSNSQDLLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
V+DL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM +SNVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAG
Sbjct: 193 EMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K + E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 62 GLRRGLKVNDLQHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ + L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|224823532|ref|ZP_03696641.1| ATP synthase F1, beta subunit [Pseudogulbenkiania ferrooxidans
2002]
gi|224603987|gb|EEG10161.1| ATP synthase F1, beta subunit [Pseudogulbenkiania ferrooxidans
2002]
Length = 464
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 237/366 (64%), Positives = 291/366 (79%), Gaps = 6/366 (1%)
Query: 553 PIKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTG 612
P+ +E + + + + L + +VQQQ+G+ +VRTIA G+++G+KR VV+TG
Sbjct: 12 PVLDVEFPRDAMPRVYDALKLVDTDLTLEVQQQLGDGVVRTIAMGSSDGLKRGMAVVNTG 71
Query: 613 KPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKV 672
I PVG TLGRI++VLG+P+D G + ++ + IH PKF +LETGIKV
Sbjct: 72 AAISVPVGAATLGRIMDVLGNPVDEAGPVATETRRAIHQPAPKFDELSSATELLETGIKV 131
Query: 673 IDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHE 732
IDLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHE
Sbjct: 132 IDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHE 191
Query: 733 MKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYR 786
MK+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR
Sbjct: 192 MKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEQFRDEKDENGKGRDVLFFVDNIYR 251
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 252 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKEGSITSIQAVYVPADDLTDP 311
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQK
Sbjct: 312 SPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGDEHYSVARGVQTTLQK 371
Query: 907 YKELKD 912
YKEL+D
Sbjct: 372 YKELRD 377
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 138/333 (41%), Gaps = 29/333 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G +D + R + + AP +
Sbjct: 60 GLKRGMAVVNTGAAISVPVGAATLGRIMDVLGNPVDEAGPVATETRRAIHQPAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 SATELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ E FRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEQFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
R V G Y + + ++ L +Y+EL
Sbjct: 347 RQLDPLVVGDEHYSVARG----VQTTLQKYKEL 375
>gi|71280422|ref|YP_266830.1| F0F1 ATP synthase subunit beta [Colwellia psychrerythraea 34H]
gi|118573522|sp|Q48AW0.1|ATPB_COLP3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|71146162|gb|AAZ26635.1| ATP synthase F1, beta subunit [Colwellia psychrerythraea 34H]
Length = 461
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G ++G++R VV+TG+ I PVG TLGRI+NVLG+PID G
Sbjct: 43 EVQQQLGGGVVRTIAMGTSDGLRRGLNVVNTGQGIQVPVGVETLGRIMNVLGEPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I K + IH P ++ Q +N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEKDRWSIHREAPAYAEQSMSNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
TGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 FTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+ST G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA GIYPAIDPL+S
Sbjct: 283 RITSTNKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAIDPLDSS 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG EHY+ A V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVVGTEHYETARGVQTVLQRYKELKD 374
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 147/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T + ++PVG E LGRI+N GE ID K+R ++ + AP ++
Sbjct: 63 GLRRGLNVVNTGQGIQVPVGVETLGRIMNVLGEPIDEAGPIGEKDRWSIHREAPAYAEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
NE L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 123 MSNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + +TG T+ E FRD G+D L
Sbjct: 183 ERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVAFTGLTMAEKFRDEGRDVLFF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I + N
Sbjct: 243 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTNK 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PAI+ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAIDPLDSSSRQLDPL 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 350 VVGTEHYETARG----VQTVLQRYKELK 373
>gi|255020241|ref|ZP_05292310.1| ATP synthase beta chain [Acidithiobacillus caldus ATCC 51756]
gi|254970383|gb|EET27876.1| ATP synthase beta chain [Acidithiobacillus caldus ATCC 51756]
Length = 469
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 277/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
++Q Q+G+ + R IA G + G+KR V TG I PVG TLGRI+NVLGDP+D KGE
Sbjct: 48 EIQTQLGDGVARGIAMGASEGLKRGLKVRRTGAAISVPVGHGTLGRIMNVLGDPVDGKGE 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ +++PIH P F + ILETG+KVIDL+CPF KGGK+GLFGGAGVGKTV MM
Sbjct: 108 VQCDQRTPIHRAAPAFDELAASTEILETGVKVIDLVCPFAKGGKVGLFGGAGVGKTVLMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF G+GER+REGNDFYHEM ES VLDKV+L YGQMNEP GNRLRV
Sbjct: 168 ELIRNIAIEHTGYSVFAGIGERTREGNDFYHEMTESKVLDKVALCYGQMNEPPGNRLRVG 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L+FIDNI+R+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADD+TDPSP+TTF HLD+T+VLSRQIAELGIYPA+DPL+S+
Sbjct: 288 RITSTKVGSITSVQAVYVPADDITDPSPATTFAHLDATVVLSRQIAELGIYPALDPLDSF 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP IVG+EHY VA + LQ+YKEL+D
Sbjct: 348 SRQLDPQIVGQEHYDVARACQKTLQRYKELQD 379
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 149/353 (42%), Gaps = 41/353 (11%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G K T +PVG LGRI+N G+ +D K + R + + AP +
Sbjct: 67 EGLKRGLKVRRTGAAISVPVGHGTLGRIMNVLGDPVDGKGEVQCDQRTPIHRAAPAFDEL 126
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ E L TG+K ID + P KG + + G GKT + ++ I N ++ ++ I
Sbjct: 127 AASTEILETGVKVIDLVCPFAKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGI 186
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ +D + + + TG T+ E+FRD G+D L+
Sbjct: 187 GERTREGNDFYHEMTESKVLDKVALCYGQMNEPPGNRLRVGLTGLTMAEHFRDEGRDILM 246
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 247 FIDNIFRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTK 293
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 294 VGSITSVQAVYVPADDITDPSPATTFAHLDATVVLSRQIAELGIYPALDPLDSFSRQLDP 353
Query: 470 -VGGAAQYKIVK----------------------KLSGDIRIMLAQYRELESF 499
+ G Y + + +LS D ++++A+ R+++ F
Sbjct: 354 QIVGQEHYDVARACQKTLQRYKELQDIIAILGMDELSADDKVLVARARKIQRF 406
>gi|163751422|ref|ZP_02158647.1| ATP synthase subunit B [Shewanella benthica KT99]
gi|161328725|gb|EDP99873.1| ATP synthase subunit B [Shewanella benthica KT99]
Length = 458
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/359 (66%), Positives = 288/359 (80%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + + + + + +K+ + +VQQQIG +VRTIA G ++G++R V +TG
Sbjct: 13 VVDVEFPQDAVPQIYDALEIKSEGLVLEVQQQIGGGVVRTIAMGTSDGLRRGLEVTNTGS 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI+NVLG+PID G I IH P F Q + +LETGIKVI
Sbjct: 73 PITVPVGSVTLGRIMNVLGEPIDEAGPIGGTDHYVIHREAPTFEEQSSSTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFY+EM
Sbjct: 133 DLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYYEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTE 793
K++ VLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVL FIDNIYR+TLAGTE
Sbjct: 193 KDAGVLDKVTMVYGQMNEPPGNRLRVALTGLTMAERFRDEGKDVLFFIDNIYRYTLAGTE 252
Query: 794 VSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFT 853
VSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITSVQA+YVPADDLTDPSP+TTF
Sbjct: 253 VSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSVQAVYVPADDLTDPSPATTFA 312
Query: 854 HLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+TIVLSR IA +GIYPA+DPL+S S+QLDP +VG+EHY VAN V+ LQ+YKELKD
Sbjct: 313 HLDATIVLSRNIASMGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKD 371
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG LGRI+N GE ID + + + AP ++
Sbjct: 60 GLRRGLEVTNTGSPITVPVGSVTLGRIMNVLGEPIDEAGPIGGTDHYVIHREAPTFEEQS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 SSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + TG T+ E FRD G+D L
Sbjct: 180 ERTREGNDFYYEMKDAGVLDKVTMVYGQMNEPPGNRLRVALTGLTMAERFRDEGKDVLFF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I + +
Sbjct: 240 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKS 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D I L N+ + PA++ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPSPATTFAHLDATIVLSRNIASMGIYPAVDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 347 VVGQEHYDV----ANGVQTVLQRYKELK 370
>gi|421896142|ref|ZP_16326541.1| atp synthase beta chain protein [Ralstonia solanacearum MolK2]
gi|206587307|emb|CAQ17891.1| atp synthase beta chain protein [Ralstonia solanacearum MolK2]
Length = 469
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V +TG PI PVG TLGRI++VLG PID G
Sbjct: 50 EVQQQLGDGVVRTIALGSSDGLRRGMRVANTGAPISVPVGHGTLGRIMDVLGRPIDEAGP 109
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +K IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 110 IACDEKRGIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 169
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 170 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 229
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 230 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 289
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 290 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 349
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY+VA+ VK LQ+YKEL+D
Sbjct: 350 SRQLDPQVVGQEHYEVADRVKKTLQRYKELRD 381
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 139/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG LGRI++ G ID + + + AP +
Sbjct: 70 GLRRGMRVANTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIACDEKRGIHQKAPKFDELS 129
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 130 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 189
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 190 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 249
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 250 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 296
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 297 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQ 356
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y++ + ++ L +Y+EL
Sbjct: 357 VVGQEHYEVADR----VKKTLQRYKEL 379
>gi|308238043|emb|CBK55612.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
Length = 424
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/343 (68%), Positives = 283/343 (82%), Gaps = 1/343 (0%)
Query: 570 IINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILN 629
I+ NN++I +VQ Q+G+ + R IA G + G+KR V TG PI PVG TLGRI+N
Sbjct: 13 IVVDANNLTI-EVQAQLGDGVARGIAMGPSEGLKRGLAVTRTGAPISVPVGHATLGRIMN 71
Query: 630 VLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFG 689
VLG+P+D KG + ++ + IH P F + +LETGIKVIDL+CPF KGGK+GLFG
Sbjct: 72 VLGEPVDGKGPVQTEDRQAIHRPAPAFDELAASTEVLETGIKVIDLVCPFAKGGKVGLFG 131
Query: 690 GAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQM 749
GAGVGKTV MMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S VLDKV+L+YGQM
Sbjct: 132 GAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVLDKVALVYGQM 191
Query: 750 NEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQP 809
NEP GNRLR LTGL++AE FR+ G+D+L+FIDNI+R+TLAGTEVSA+LGR PSAVGYQP
Sbjct: 192 NEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLGRMPSAVGYQP 251
Query: 810 TLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELG 869
TLAEEMG+LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELG
Sbjct: 252 TLAEEMGQLQERITSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELG 311
Query: 870 IYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IYPA+DPL+S+S+QLDP IVG+EHY VA + LQ+YKEL+D
Sbjct: 312 IYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQD 354
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 145/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI+N GE +D K ++R+ + + AP +
Sbjct: 42 EGLKRGLAVTRTGAPISVPVGHATLGRIMNVLGEPVDGKGPVQTEDRQAIHRPAPAFDEL 101
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ E L TGIK ID + P KG + + G GKT + ++ I N ++ ++ +
Sbjct: 102 AASTEVLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGV 161
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ +D +V + + + TG T+ E+FRD G+D L+
Sbjct: 162 GERTREGNDFYHEMTDSGVLDKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILM 221
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E ++ +++I +
Sbjct: 222 FIDNIFRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGQL------QERITSTK 268
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 269 VGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPALDPLDSFSRQLDP 328
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + + L +Y+EL+
Sbjct: 329 QIVGQEHYDVARS----CQKTLQRYKELQ 353
>gi|187479684|ref|YP_787709.1| F0F1 ATP synthase subunit beta [Bordetella avium 197N]
gi|118573510|sp|Q2KU36.1|ATPB_BORA1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|115424271|emb|CAJ50824.1| ATP synthase beta chain [Bordetella avium 197N]
Length = 466
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG PI PVG TLGRI++VLG PID G
Sbjct: 47 EVQQQLGDGVVRTIALGSSDGLRRGMPVSRTGAPISVPVGHGTLGRIMDVLGRPIDEAGP 106
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
IN+ +K IH PKF + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 107 INADEKRAIHQHAPKFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 166
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEM+ESNVLDKV++++GQMNEP GNRLRVA
Sbjct: 167 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVA 226
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 227 LTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 286
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 287 RITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSS 346
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY+VA V+ LQ+YKEL+D
Sbjct: 347 SRQLDPQVVGEEHYQVARGVQQTLQRYKELRD 378
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 147/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID + + + AP +
Sbjct: 67 GLRRGMPVSRTGAPISVPVGHGTLGRIMDVLGRPIDEAGPINADEKRAIHQHAPKFDELS 126
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 127 PSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 186
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 187 ERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFF 246
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 247 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 293
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 294 GSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSSSRQLDPQ 353
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y++ + ++ L +Y+EL +L K + KI + Q
Sbjct: 354 VVGEEHYQVARG----VQQTLQRYKELRDIIAILGMDELSPEDKQAVARARKIQRFLSQP 409
Query: 528 PH 529
H
Sbjct: 410 FH 411
>gi|409396514|ref|ZP_11247500.1| F0F1 ATP synthase subunit beta [Pseudomonas sp. Chol1]
gi|419955880|ref|ZP_14472000.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri TS44]
gi|387967300|gb|EIK51605.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri TS44]
gi|409118995|gb|EKM95385.1| F0F1 ATP synthase subunit beta [Pseudomonas sp. Chol1]
Length = 458
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR V +TG I PVG TLGRI+NVLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLDVNNTGNAIQVPVGTGTLGRIMNVLGEPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ ++ IH P +++Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 VACDEQWGIHRAAPSYADQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFYHEMK+SNVLDKV+++YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFREEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+ LDP +VG+EHY+V V++ LQ+YKELKD
Sbjct: 340 SRSLDPLVVGQEHYEVTRGVQYVLQRYKELKD 371
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 146/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T ++PVG LGRI+N GE ID + + + AP D+
Sbjct: 59 EGLKRGLDVNNTGNAIQVPVGTGTLGRIMNVLGEPIDEAGPVACDEQWGIHRAAPSYADQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
N+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FR+ G+D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFREEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 FIDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 286 TGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRSLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y++ + ++ +L +Y+EL+
Sbjct: 346 LVVGQEHYEVTRG----VQYVLQRYKELK 370
>gi|390569478|ref|ZP_10249763.1| F0F1 ATP synthase subunit beta [Burkholderia terrae BS001]
gi|389938338|gb|EIN00182.1| F0F1 ATP synthase subunit beta [Burkholderia terrae BS001]
Length = 459
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/356 (67%), Positives = 290/356 (81%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E N+ K + + L+ + +VQQQ+G+ IVRTI G+++G++R +V +T KPI
Sbjct: 16 VEFPRENMPKVYDALILEGSELTLEVQQQLGDGIVRTICLGSSDGLRRGVVVKNTAKPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G I+S+ IH P+F + +LETGIKVIDL+
Sbjct: 76 VPVGKPTLGRIMDVLGRPIDEAGPISSETTRSIHQKAPRFDELSPSTELLETGIKVIDLI 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA
Sbjct: 196 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMGKLQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGKLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+Q+DP+++GEEHY + V+ LQ+YKEL+D
Sbjct: 316 ATVVLSRDIASLGIYPAVDPLDSTSRQIDPHVIGEEHYSITRRVQQTLQRYKELRD 371
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 144/352 (40%), Gaps = 25/352 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T K +PVG LGRI++ G ID + ++ + AP + E L TGI
Sbjct: 70 TAKPISVPVGKPTLGRIMDVLGRPIDEAGPISSETTRSIHQKAPRFDELSPSTELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID + P KG + + G GKT ++ I N K ++ +G++ +
Sbjct: 130 KVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
+++K N +D +V + + TG T+ E+FRD G D L D++ + A
Sbjct: 190 HEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLA 249
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P V Y L E K+ +++I + G++T+ +
Sbjct: 250 GTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKTGSITSVQAVY 296
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P D + L ++ + PA++ S SR V G Y I
Sbjct: 297 VPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPHVIGEEHYSIT 356
Query: 480 KKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
++ ++ L +Y+EL +L K + KI + Q H
Sbjct: 357 RR----VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQPFH 404
>gi|429463141|ref|YP_007184604.1| F0F1 ATP synthase subunit alpha [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
gi|451811199|ref|YP_007447654.1| F-type H+-transporting ATPase subunit alpha [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|429338655|gb|AFZ83078.1| F0F1 ATP synthase subunit alpha [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
gi|451776357|gb|AGF47356.1| F-type H+-transporting ATPase subunit alpha [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 513
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 244/421 (57%), Positives = 320/421 (76%), Gaps = 9/421 (2%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++G + T +I E+PVG EL GR+VN+ GE ID K + +EK+
Sbjct: 73 AVILGDYTKISEGDQVRTTGRILEVPVGPELRGRVVNALGEPIDGKGPINASETDVIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR +V++P+ TGIKSIDSM+PIG+GQRELIIGDRQTGKT++AID IINQK KNV
Sbjct: 133 APGVIDRYTVSQPMQTGIKSIDSMVPIGRGQRELIIGDRQTGKTSVAIDAIINQKGKNVT 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ NV+ KL+ Y ++YT++V ATA+DSAA QYI+PY GCT+GEYFRD
Sbjct: 193 CIYVAIGQKASSINNVVRKLEEYGALEYTIIVVATASDSAAMQYIAPYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++ ++EK
Sbjct: 253 GDDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVRSEYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
+ G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPAIN G+
Sbjct: 313 TNGVVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGVRPAINAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKLSG IR LAQYREL +FS+FSSDLD T+ QL G+++ ++K
Sbjct: 373 SVSRVGGAAQTKVIKKLSGGIRTDLAQYRELAAFSQFSSDLDDATRRQLERGKRVVEILK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIINLKNNIS--INKVQ 583
Q+ ++ +S+ E + L + F + + +I +FE ++K F LK N + IN+++
Sbjct: 433 QQQYQPFSVWEQSVSLFCVTKGFLDDVDVNRILVFE-KLLKDF----LKTNFATLINQIE 487
Query: 584 Q 584
+
Sbjct: 488 K 488
Score = 109 bits (272), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 154/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ I V TG+ + PVG GR++N LG+PID KG IN+ + I
Sbjct: 71 VGAVILGDYTKISEGDQVRTTGRILEVPVGPELRGRVVNALGEPIDGKGPINASETDVIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P ++ + ++TGIK ID + P +G + + G GKT ++ I N ++
Sbjct: 131 KVAPGVIDRYTVSQPMQTGIKSIDSMVPIGRGQRELIIGDRQTGKTSVAIDAIINQKGKN 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ N+ +++E L+ ++ ++ + + G ++ E F
Sbjct: 191 VTC-IYVAIGQKASSINNVVRKLEEYGALEYTIIVVATASDSAAMQYIAPYAGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G D L+ D++ + A ++S +L R P Y + +L ER S
Sbjct: 250 RDRGDDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVRSEYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + G+ PAI+
Sbjct: 310 EKFTNGVVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGVRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
S S+ + G KV + ++ L +Y+EL
Sbjct: 370 AGISVSR-----VGGAAQTKVIKKLSGGIRTDLAQYREL 403
>gi|344201252|ref|YP_004785578.1| ATP synthase subunit beta [Acidithiobacillus ferrivorans SS3]
gi|343776696|gb|AEM49252.1| ATP synthase subunit beta [Acidithiobacillus ferrivorans SS3]
Length = 469
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 236/343 (68%), Positives = 282/343 (82%), Gaps = 1/343 (0%)
Query: 570 IINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILN 629
I+ N++I +VQ Q+G+ + R IA G + G+KR V TG PI PVG TLGRI++
Sbjct: 38 IVVSDKNLTI-EVQAQLGDGVARGIAMGPSEGLKRGLAVRRTGAPISVPVGHATLGRIMD 96
Query: 630 VLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFG 689
VLGDP+D KG I + ++ IH P F + +LETGIKVIDL+CPF KGGK+GLFG
Sbjct: 97 VLGDPVDGKGPIQTAERKAIHRPAPAFDELAASTEVLETGIKVIDLVCPFAKGGKVGLFG 156
Query: 690 GAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQM 749
GAGVGKTV MMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S VLDKV+L+YGQM
Sbjct: 157 GAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVLDKVALVYGQM 216
Query: 750 NEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQP 809
NEP GNRLR LTGL++AE FR+ G+D+L+FIDNI+R+TLAGTEVSA+LGR PSAVGYQP
Sbjct: 217 NEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLGRMPSAVGYQP 276
Query: 810 TLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELG 869
TLAEEMGKLQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELG
Sbjct: 277 TLAEEMGKLQERITSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELG 336
Query: 870 IYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IYPA+DPL+S+S+QLDP IVG+EHY VA + LQ+YKEL+D
Sbjct: 337 IYPALDPLDSFSRQLDPAIVGQEHYDVARSCQKTLQRYKELQD 379
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 143/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G+ +D K R+ + + AP +
Sbjct: 67 EGLKRGLAVRRTGAPISVPVGHATLGRIMDVLGDPVDGKGPIQTAERKAIHRPAPAFDEL 126
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ E L TGIK ID + P KG + + G GKT + ++ I N ++ ++ +
Sbjct: 127 AASTEVLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGV 186
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ +D +V + + + TG T+ E+FRD G+D L+
Sbjct: 187 GERTREGNDFYHEMTDSGVLDKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILM 246
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 247 FIDNIFRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTK 293
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 294 VGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPALDPLDSFSRQLDP 353
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + + L +Y+EL+
Sbjct: 354 AIVGQEHYDVARSC----QKTLQRYKELQ 378
>gi|94312425|ref|YP_585635.1| F0F1 ATP synthase subunit beta [Cupriavidus metallidurans CH34]
gi|118573729|sp|Q1LHL0.1|ATPB_RALME RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|93356277|gb|ABF10366.1| F1 sector of membrane-bound ATP synthase, beta subunit [Cupriavidus
metallidurans CH34]
Length = 467
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V+ TG PI PVG TLGRI++VLG PID G
Sbjct: 48 EVQQQLGDGVVRTIALGSSDGLRRGMSVMSTGAPISVPVGHGTLGRIMDVLGRPIDEAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + +K IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IEADEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG EHY+VA V+ LQ+YKEL+D
Sbjct: 348 SRQLDPQVVGTEHYEVARRVQQTLQRYKELRD 379
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 139/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID + + + AP +
Sbjct: 68 GLRRGMSVMSTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIEADEKRAIHQKAPKFDELS 127
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 128 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 187
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 188 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 247
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 248 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 294
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 295 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQ 354
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y++ ++ ++ L +Y+EL
Sbjct: 355 VVGTEHYEVARR----VQQTLQRYKEL 377
>gi|393777126|ref|ZP_10365419.1| ATP synthase, F1 sector, beta subunit [Ralstonia sp. PBA]
gi|392715827|gb|EIZ03408.1| ATP synthase, F1 sector, beta subunit [Ralstonia sp. PBA]
Length = 466
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G+++G++R V TG PI PVG+ TLGRI++VLG PID G
Sbjct: 48 EVQQQLGDGIVRTIALGSSDGLRRGMAVKGTGAPISVPVGEGTLGRIMDVLGRPIDEAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S ++ IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IASDERRGIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LTGLTMAERFRDDGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP IVG+EHY+VA V+ LQ+YKEL+D
Sbjct: 348 SRQLDPQIVGQEHYEVARGVQQTLQRYKELRD 379
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 138/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID R + + AP +
Sbjct: 68 GLRRGMAVKGTGAPISVPVGEGTLGRIMDVLGRPIDEAGPIASDERRGIHQKAPKFDELS 127
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 128 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 187
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 188 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDDGRDILFF 247
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 248 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 294
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 295 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQ 354
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
+ G Y++ + ++ L +Y+EL
Sbjct: 355 IVGQEHYEVARG----VQQTLQRYKEL 377
>gi|17548034|ref|NP_521436.1| ATP synthase F0F1 subunit beta [Ralstonia solanacearum GMI1000]
gi|81592095|sp|Q8XU76.1|ATPB_RALSO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|17430340|emb|CAD17105.1| probable atp synthase beta chain protein [Ralstonia solanacearum
GMI1000]
Length = 467
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V +TG PI PVG TLGRI++VLG PID G
Sbjct: 48 EVQQQLGDGVVRTIALGSSDGLRRGMPVSNTGAPISVPVGHGTLGRIMDVLGRPIDEAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + +K IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IAADEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP IVG EHY+VA V+ LQ+YKEL+D
Sbjct: 348 SRQLDPQIVGTEHYEVARRVQQTLQRYKELRD 379
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 139/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID + + + AP +
Sbjct: 68 GLRRGMPVSNTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIAADEKRAIHQKAPKFDELS 127
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 128 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 187
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 188 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 247
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 248 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 294
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 295 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQ 354
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
+ G Y++ ++ ++ L +Y+EL
Sbjct: 355 IVGTEHYEVARR----VQQTLQRYKEL 377
>gi|358635166|dbj|BAL22463.1| F-type H+-transporting ATPase, alpha subunit [Azoarcus sp. KH32C]
Length = 512
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 237/417 (56%), Positives = 322/417 (77%), Gaps = 5/417 (1%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++T+G T +I E+PVG EL+GR+VN+ G+ ID K K + +EK+
Sbjct: 73 AVVLGEYEHITEGDSVKATGRILEVPVGPELIGRVVNALGQPIDGKGPINAKLTDKIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KS+DSM+PIG+GQRELIIGDRQTGKT +A+D IINQK +++
Sbjct: 133 APGVIWRKSVSQPVQTGLKSVDSMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGQDMF 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK S++ NV+ KL+ + M+YT+VVAATA++SAA Q+I+PY+GCT+GEYFRD
Sbjct: 193 CIYVAVGQKASTIANVVRKLEEHGAMEYTIVVAATASESAAMQFIAPYSGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LIIYDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++++ ++EK
Sbjct: 253 GQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVSEEYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA P+IET GDV++F+PTNVISITDGQIFLDT+LFN+ RPAIN G+
Sbjct: 313 TNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLDTDLFNAGIRPAINAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKLSG IR LAQYREL +F++F+SDLD T+ QL G +++ LMK
Sbjct: 373 SVSRVGGAAQTKVIKKLSGGIRTDLAQYRELAAFAQFASDLDDATRKQLERGRRVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIINLKNNISINKV 582
Q + SI E+ I L + N +F + + ++ FE N ++ F + KN ++K+
Sbjct: 433 QVQYAPLSISEMAITLFAVNNGYFDDVEVGRVLAFE-NGLQQF--VKTKNAALVSKI 486
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 152/339 (44%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I V TG+ + PVG +GR++N LG PID KG IN+K I
Sbjct: 71 VGAVVLGEYEHITEGDSVKATGRILEVPVGPELIGRVVNALGQPIDGKGPINAKLTDKIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K +D + P +G + + G GKT ++ I N +
Sbjct: 131 KVAPGVIWRKSVSQPVQTGLKSVDSMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGQD 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ VG+++ + +++E ++ ++ +E + + +G ++ E F
Sbjct: 191 MFC-IYVAVGQKASTIANVVRKLEEHGAMEYTIVVAATASESAAMQFIAPYSGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A ++S +L R P Y + +L ER S
Sbjct: 250 RDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVSEEYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 310 EKFTNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLDTDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
S S+ + G KV + ++ L +Y+EL
Sbjct: 370 AGISVSR-----VGGAAQTKVIKKLSGGIRTDLAQYREL 403
>gi|410629461|ref|ZP_11340161.1| F-type H+-transporting ATPase subunit beta [Glaciecola arctica
BSs20135]
gi|410150946|dbj|GAC17028.1| F-type H+-transporting ATPase subunit beta [Glaciecola arctica
BSs20135]
Length = 461
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G+T+G++R V ++G I PVG TLGRI++VLG+PID G
Sbjct: 43 EVQQQLGGGVVRTIAMGSTDGLRRGLAVENSGAAIQVPVGVATLGRIMDVLGNPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERMSIHREAPTYEEQSSSIELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM ESNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RIASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSS 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++G+EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVIGQEHYDTARGVQSVLQRYKELKD 374
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + ++PVG LGRI++ G ID + R ++ + AP ++
Sbjct: 63 GLRRGLAVENSGAAIQVPVGVATLGRIMDVLGNPIDEAGPIGEEERMSIHREAPTYEEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 123 SSIELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 183 ERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 243 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERIASTKT 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDPL 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 350 VIGQEHYDTARG----VQSVLQRYKELK 373
>gi|308238029|emb|CBK55605.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
Length = 419
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/343 (68%), Positives = 283/343 (82%), Gaps = 1/343 (0%)
Query: 570 IINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILN 629
I+ NN++I +VQ Q+G+ + R IA G + G+KR V TG PI PVG TLGRI+N
Sbjct: 13 IVVDANNLTI-EVQAQLGDGVARGIAMGPSEGLKRGLAVTRTGAPISVPVGHATLGRIMN 71
Query: 630 VLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFG 689
VLG+P+D KG + ++ + IH P F + +LETGIKVIDL+CPF KGGK+GLFG
Sbjct: 72 VLGEPVDGKGPVQTEDRQAIHRPAPAFDELAASTEVLETGIKVIDLVCPFAKGGKVGLFG 131
Query: 690 GAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQM 749
GAGVGKTV MMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S VLDKV+L+YGQM
Sbjct: 132 GAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVLDKVALVYGQM 191
Query: 750 NEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQP 809
NEP GNRLR LTGL++AE FR+ G+D+L+FIDNI+R+TLAGTEVSA+LGR PSAVGYQP
Sbjct: 192 NEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLGRMPSAVGYQP 251
Query: 810 TLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELG 869
TLAEEMG+LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELG
Sbjct: 252 TLAEEMGQLQERITSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELG 311
Query: 870 IYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IYPA+DPL+S+S+QLDP IVG+EHY VA + LQ+YKEL+D
Sbjct: 312 IYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQD 354
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 145/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI+N GE +D K ++R+ + + AP +
Sbjct: 42 EGLKRGLAVTRTGAPISVPVGHATLGRIMNVLGEPVDGKGPVQTEDRQAIHRPAPAFDEL 101
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ E L TGIK ID + P KG + + G GKT + ++ I N ++ ++ +
Sbjct: 102 AASTEVLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGV 161
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ +D +V + + + TG T+ E+FRD G+D L+
Sbjct: 162 GERTREGNDFYHEMTDSGVLDKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILM 221
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E ++ +++I +
Sbjct: 222 FIDNIFRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGQL------QERITSTK 268
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 269 VGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPALDPLDSFSRQLDP 328
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + + L +Y+EL+
Sbjct: 329 QIVGQEHYDVARS----CQKTLQRYKELQ 353
>gi|255320598|ref|ZP_05361775.1| ATP synthase F1, beta subunit [Acinetobacter radioresistens SK82]
gi|262380769|ref|ZP_06073922.1| ATP synthase F1, beta subunit [Acinetobacter radioresistens SH164]
gi|421464420|ref|ZP_15913110.1| ATP synthase F1, beta subunit [Acinetobacter radioresistens
WC-A-157]
gi|421857567|ref|ZP_16289899.1| ATP synthase subunit beta [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|255302214|gb|EET81454.1| ATP synthase F1, beta subunit [Acinetobacter radioresistens SK82]
gi|262297717|gb|EEY85633.1| ATP synthase F1, beta subunit [Acinetobacter radioresistens SH164]
gi|400205173|gb|EJO36154.1| ATP synthase F1, beta subunit [Acinetobacter radioresistens
WC-A-157]
gi|403186990|dbj|GAB76100.1| ATP synthase subunit beta [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 464
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/360 (66%), Positives = 292/360 (81%), Gaps = 7/360 (1%)
Query: 560 FEINII-KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTP 618
FE N + K + + + + +VQQQ+G+ +VRTIA G+T G+KR V ++G PI P
Sbjct: 18 FERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLPVTNSGAPISVP 77
Query: 619 VGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCP 678
VG LGRI++VLG PID G + ++++ PIH P ++ Q + ++LETGIKVIDLLCP
Sbjct: 78 VGTACLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLETGIKVIDLLCP 137
Query: 679 FLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV 738
F KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+SNV
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNV 197
Query: 739 LDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGT 792
LDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGT
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAGT 257
Query: 793 EVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTF 852
EVSA+LGR PSAVGYQPTLAEEMG LQERI+STKNG+ITS+QA+YVPADDLTDPSP+TTF
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKNGSITSIQAVYVPADDLTDPSPATTF 317
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA GIYPAIDPL+S S+QLDP +VG+EHY++A V+ LQ+YKELKD
Sbjct: 318 AHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKELKD 377
Score = 102 bits (255), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 181/420 (43%), Gaps = 39/420 (9%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+ + ++++F N+V + Q++GT E Q G V + + + L +G
Sbjct: 8 QIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLPV 67
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
+ +PVG LGRI++ G ID + R + + AP ++ + + L T
Sbjct: 68 TNSGAPISVPVGTACLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLET 127
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 128 GIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 187
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYD 356
+++K N +D +V + + TG T+ EYFRD G+D L+ D
Sbjct: 188 FYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVD 247
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P V Y L E + +++I + NG+
Sbjct: 248 NIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKNGS 294
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VG 471
+T+ + D+T P + D + L ++ +S PAI+ S SR V
Sbjct: 295 ITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVV 354
Query: 472 GAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQL--YNGEKISLLMKQKPH 529
G Y+I + ++ +L +Y+EL+ ++ + +L Y KI Q H
Sbjct: 355 GQEHYEIARS----VQNVLQRYKELKDIIAILGMDELAEEDKLVVYRARKIQRFFSQPFH 410
>gi|114330302|ref|YP_746524.1| F0F1 ATP synthase subunit alpha [Nitrosomonas eutropha C91]
gi|122314652|sp|Q0AJB2.1|ATPA1_NITEC RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
synthase F1 sector subunit alpha 1; AltName:
Full=F-ATPase subunit alpha 1
gi|114307316|gb|ABI58559.1| ATP synthase F1 subcomplex alpha subunit [Nitrosomonas eutropha
C91]
Length = 513
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 236/405 (58%), Positives = 310/405 (76%), Gaps = 4/405 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ ++LT+G CT ++ E+PVG LLGR+VN+ G+ ID K + E +EKI
Sbjct: 73 AVILGAYEHLTEGDIVKCTGRVLEVPVGEALLGRVVNALGQPIDGKGPVAAQGMEPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KS+DSM+PIG+GQRELIIGDRQTGKT +AID IINQK +++I
Sbjct: 133 APGVISRKSVDQPMQTGLKSVDSMVPIGRGQRELIIGDRQTGKTAVAIDAIINQKGEDMI 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ NV+ KL+ M YT+VV A+A++SAA QYI+PY+GCT+GEYFRD
Sbjct: 193 CIYVAIGQKASSIANVVRKLEEVGAMAYTIVVVASASESAAMQYIAPYSGCTMGEYFRDK 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
GQD LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 253 GQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEKA 312
Query: 408 ---KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVG 464
K+ K G+LTA PIIET GDVT+F+PTNVISITDGQIFL+++LFN+ RPAIN G
Sbjct: 313 TGGKVKGK-TGSLTALPIIETQAGDVTAFVPTNVISITDGQIFLESDLFNAGIRPAINAG 371
Query: 465 LSVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLM 524
+SVSRVGGAAQ K++KKL G IR+ LAQYREL +F++F+SDLD T+ QL G+ + LM
Sbjct: 372 VSVSRVGGAAQTKVIKKLGGGIRLALAQYRELAAFAQFASDLDEATRKQLERGKMATELM 431
Query: 525 KQKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
KQ + + E+ + L + +F + IK+ FE + + R
Sbjct: 432 KQAQYATLKVSEMALTLFALNKGYFDDVDIKRALAFESALKSHVR 476
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 154/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G + IV TG+ + PVG+ LGR++N LG PID KG + ++ PI
Sbjct: 71 VGAVILGAYEHLTEGDIVKCTGRVLEVPVGEALLGRVVNALGQPIDGKGPVAAQGMEPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P ++ + ++TG+K +D + P +G + + G GKT ++ I N E
Sbjct: 131 KIAPGVISRKSVDQPMQTGLKSVDSMVPIGRGQRELIIGDRQTGKTAVAIDAIINQKGED 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ + +++E + ++ +E + + +G ++ E F
Sbjct: 191 MIC-IYVAIGQKASSIANVVRKLEEVGAMAYTIVVVASASESAAMQYIAPYSGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 250 RDKGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D+T P+ + D I L + GI PAI+
Sbjct: 310 EKATGGKVKGKTGSLTALPIIETQAGDVTAFVPTNVISITDGQIFLESDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G KV + ++ L +Y+EL
Sbjct: 370 AGVSVSR-----VGGAAQTKVIKKLGGGIRLALAQYREL 403
>gi|71276027|ref|ZP_00652308.1| ATP synthase F1, beta subunit [Xylella fastidiosa Dixon]
gi|170729691|ref|YP_001775124.1| F0F1 ATP synthase subunit beta [Xylella fastidiosa M12]
gi|226740694|sp|B0U598.1|ATPB_XYLFM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|71163110|gb|EAO12831.1| ATP synthase F1, beta subunit [Xylella fastidiosa Dixon]
gi|71730761|gb|EAO32834.1| ATP synthase F1, beta subunit [Xylella fastidiosa subsp. sandyi
Ann-1]
gi|167964484|gb|ACA11494.1| Sodium-transporting two-sector ATPase [Xylella fastidiosa M12]
Length = 466
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 244/365 (66%), Positives = 286/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
I +E N+ K + + + I +VQQQ+G+ IVRTIA G+T+G+KRN I DTG
Sbjct: 13 IVDVEFPRNNVPKVYNALKIDGTAIILEVQQQLGDGIVRTIALGSTDGLKRNLIATDTGH 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
I PVG TLGRI++VLG+PID G I + IH P + +Q +LETGIKVI
Sbjct: 73 AITVPVGTGTLGRIMDVLGNPIDEAGPITYTDQWEIHRNAPSYEDQASTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL+IAE FR+ GKDVLLFIDNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTIAEYFRDEKDSSGKGKDVLLFIDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+ST NG+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTANGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLDST+ LSR IA LGIYPA+DPL+S S+Q+DP I+GEEHY V+ LQKY
Sbjct: 313 PATTFGHLDSTVTLSRSIAALGIYPAVDPLDSSSRQMDPLIIGEEHYNTTQRVQQTLQKY 372
Query: 908 KELKD 912
K+LKD
Sbjct: 373 KDLKD 377
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 138/318 (43%), Gaps = 29/318 (9%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID ++ + + AP D+ S E L TGIK ID M
Sbjct: 76 VPVGTGTLGRIMDVLGNPIDEAGPITYTDQWEIHRNAPSYEDQASTTELLETGIKVIDLM 135
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K + + ++ +G++ + +++K
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDLTKHAWA 364
N +D +V + + TG TI EYFRD G+D L+ D++ ++ A
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTIAEYFRDEKDSSGKGKDVLLFIDNIYRYTLA 255
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P + L E + +++I + NG++T+ +
Sbjct: 256 GTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTANGSITSIQAVY 302
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P D + L ++ PA++ S SR + G Y
Sbjct: 303 VPADDLTDPSPATTFGHLDSTVTLSRSIAALGIYPAVDPLDSSSRQMDPLIIGEEHYNTT 362
Query: 480 KKLSGDIRIMLAQYRELE 497
++ ++ L +Y++L+
Sbjct: 363 QR----VQQTLQKYKDLK 376
>gi|112791368|gb|ABI21954.1| ATP synthase beta subunit, partial [Brenneria rubrifaciens]
Length = 416
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR I+ G+++G++R V + G I PVG TLGRI+NVLG+P+D KG+
Sbjct: 15 EVQQQLGGGVVRCISMGSSDGLRRGLNVSNLGHAIEVPVGKATLGRIMNVLGEPVDMKGD 74
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++ PIH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 75 IGEEECWPIHRSAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 134
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 135 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 194
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 195 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 254
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 255 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 314
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 315 SRQLDPLVVGQEHYDVARGVQSVLQRYQELKD 346
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 138/314 (43%), Gaps = 23/314 (7%)
Query: 190 FEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSID 249
E+PVG LGRI+N GE +D K + + + AP + + E L TGIK ID
Sbjct: 49 IEVPVGKATLGRIMNVLGEPVDMKGDIGEEECWPIHRSAPSYEELSNSQELLETGIKVID 108
Query: 250 SMIPIGKGQRELIIGDRQTGKTTIAIDTIINQK-NKNVICIYVCIGQKISSLINVINKLK 308
M P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 109 LMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMT 168
Query: 309 YYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQI 368
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++
Sbjct: 169 DSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEV 228
Query: 369 SLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEG 428
S LL R P V Y + + + + +++I + G++T+ +
Sbjct: 229 SALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKTGSITSVQAVYVPAD 275
Query: 429 DVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLS 483
D+T P + D + L + + PA++ S SR V G Y + +
Sbjct: 276 DLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARG-- 333
Query: 484 GDIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 334 --VQSVLQRYQELK 345
>gi|56477133|ref|YP_158722.1| ATP synthase F0F1 subunit beta [Aromatoleum aromaticum EbN1]
gi|81357643|sp|Q5P4E2.1|ATPB_AZOSE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|56313176|emb|CAI07821.1| F1-ATP synthase, beta subunit [Aromatoleum aromaticum EbN1]
Length = 466
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TGK I PVG TLGRI++VLG PID G
Sbjct: 47 EVQQQLGDGVVRTIAMGSSDGLRRGMKVASTGKGISIPVGHGTLGRIMDVLGRPIDEAGP 106
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + + PIH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 107 IEADELRPIHAKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 166
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 167 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 226
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQE
Sbjct: 227 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 286
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 287 RITSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 346
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY VA +V+ LQ+YKEL+D
Sbjct: 347 SRQLDPLVVGEEHYNVARQVQVTLQRYKELRD 378
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 136/327 (41%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T K IPVG LGRI++ G ID + AP +
Sbjct: 67 GLRRGMKVASTGKGISIPVGHGTLGRIMDVLGRPIDEAGPIEADELRPIHAKAPKFDELS 126
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 127 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 186
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 187 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 246
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + RL ER I +
Sbjct: 247 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKV 293
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 294 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPL 353
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + ++ +++ L +Y+EL
Sbjct: 354 VVGEEHYNVARQ----VQVTLQRYKEL 376
>gi|336313654|ref|ZP_08568593.1| ATP synthase beta chain [Shewanella sp. HN-41]
gi|335862675|gb|EGM67867.1| ATP synthase beta chain [Shewanella sp. HN-41]
Length = 463
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 283/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G+++G++R VV++G PI PVG TLGRI+NVLG+PID G
Sbjct: 44 EVQQQLGGGVVRTIAMGSSDGLRRGLEVVNSGSPISVPVGVATLGRIMNVLGEPIDEAGP 103
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + +Q +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 104 IGEEERYVIHRAAPSYEDQSNTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 163
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFY+EMK+S VLDKV+++YGQMNEP GNRLRVA
Sbjct: 164 ELINNIAKAHSGLSVFAGVGERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVA 223
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
L+GL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 224 LSGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 283
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 284 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 343
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VAN V+ LQ+YKELKD
Sbjct: 344 SRQLDPLVVGQEHYDVANGVQTVLQRYKELKD 375
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 153/363 (42%), Gaps = 33/363 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + +PVG LGRI+N GE ID + R + + AP D+
Sbjct: 64 GLRRGLEVVNSGSPISVPVGVATLGRIMNVLGEPIDEAGPIGEEERYVIHRAAPSYEDQS 123
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 124 NTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 183
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + +G T+ E FRD G+D L+
Sbjct: 184 ERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALSGLTMAEKFRDEGRDVLLF 243
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 244 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 290
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 291 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 350
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE------SFSKFSSDLDIVTKTQLYNGEKISLL 523
V G Y + + ++ +L +Y+EL+ + S D KT ++ KI
Sbjct: 351 VVGQEHYDV----ANGVQTVLQRYKELKDIIAILGMDELSDD----DKTTVFRARKIERF 402
Query: 524 MKQ 526
+ Q
Sbjct: 403 LSQ 405
>gi|112791386|gb|ABI21963.1| ATP synthase beta subunit, partial [Samsonia erythrinae]
Length = 421
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR I+ G+++G++R V + PI PVG TLGRI+NVLG+P+D KG+
Sbjct: 17 EVQQQLGGGVVRCISMGSSDGLRRGLTVENLEHPIEVPVGKATLGRIMNVLGEPVDMKGD 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRSAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + R + + AP +
Sbjct: 37 GLRRGLTVENLEHPIEVPVGKATLGRIMNVLGEPVDMKGDIGEEERWAIHRSAPSYEELS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 217 VDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDVARG----VQSILQRYQELK 347
>gi|440233135|ref|YP_007346928.1| ATP synthase F1 subcomplex beta subunit [Serratia marcescens FGI94]
gi|440054840|gb|AGB84743.1| ATP synthase F1 subcomplex beta subunit [Serratia marcescens FGI94]
Length = 460
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G ++G++R V D PI PVG TLGRI+NVLG PID KG+
Sbjct: 42 EVQQQLGGGVVRCIAMGTSDGLRRGLKVNDLEHPIEVPVGKATLGRIMNVLGQPIDMKGD 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKV+DL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPSYEELSSSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 373
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K E E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 62 GLRRGLKVNDLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|386817148|ref|ZP_10104366.1| ATP synthase F1 subcomplex beta subunit [Thiothrix nivea DSM 5205]
gi|386421724|gb|EIJ35559.1| ATP synthase F1 subcomplex beta subunit [Thiothrix nivea DSM 5205]
Length = 458
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G ++G+KR V +TG PI PVG TLGRI++VLG+P+DN G
Sbjct: 40 EVQQQLGDGIVRTIAMGTSDGLKRGMKVDNTGAPISVPVGQATLGRIMDVLGNPVDNAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ S+ K PIH PP + Q + +ILETGIKVIDL+ P KGGKIGLFGGAGVGKTV +M
Sbjct: 100 VASETKMPIHRAPPSYEEQASSIDILETGIKVIDLIMPIAKGGKIGLFGGAGVGKTVTLM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEM E V+DKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMTEGGVIDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVL+F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEYFRDEGRDVLMFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGALQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITS QA+YVPADDLTDPSP+TTF HLD+T+VLSRQ+AELGIYPA+DPL+S
Sbjct: 280 RITSTKNGSITSFQAVYVPADDLTDPSPATTFAHLDATLVLSRQVAELGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG++HY A V+ LQ+YKEL+D
Sbjct: 340 SRQLDPLVVGKDHYDTARSVQGVLQRYKELQD 371
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 145/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T +PVG LGRI++ G +DN + + + + P ++
Sbjct: 60 GLKRGMKVDNTGAPISVPVGQATLGRIMDVLGNPVDNAGPVASETKMPIHRAPPSYEEQA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S + L TGIK ID ++PI KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 SSIDILETGIKVIDLIMPIAKGGKIGLFGGAGVGKTVTLMELINNIAKQHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ +D +V + + TG T+ EYFRD G+D L+
Sbjct: 180 ERTREGNDFYHEMTEGGVIDKVALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLMF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I + N
Sbjct: 240 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGAL------QERITSTKN 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+F + D+T P + D + L + PA++ S SR
Sbjct: 287 GSITSFQAVYVPADDLTDPSPATTFAHLDATLVLSRQVAELGIYPAVDPLDSTSRQLDPL 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + G +L +Y+EL+
Sbjct: 347 VVGKDHYDTARSVQG----VLQRYKELQ 370
>gi|112791388|gb|ABI21964.1| ATP synthase beta subunit, partial [Pectobacterium cacticida]
Length = 421
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G++R V + PI PVG TLGRI+NVLG+P+D KG+
Sbjct: 17 EVQQQLGGGVVRCIAMGSSDGLRRGLAVNNLDHPIEVPVGKATLGRIMNVLGEPVDMKGD 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRPAPTYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 137/313 (43%), Gaps = 23/313 (7%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDS 250
E+PVG LGRI+N GE +D K + R + + AP + + E L TGIK ID
Sbjct: 52 EVPVGKATLGRIMNVLGEPVDMKGDIGEEERWAIHRPAPTYEELSNSQELLETGIKVIDL 111
Query: 251 MIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKY 309
M P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 112 MCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTD 171
Query: 310 YNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQIS 369
N +D +V + + TG T+ E FRD G+D L+ D++ ++ A ++S
Sbjct: 172 SNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVS 231
Query: 370 LLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGD 429
LL R P + L E + +++I + G++T+ + D
Sbjct: 232 ALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKTGSITSVQAVYVPADD 278
Query: 430 VTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSG 484
+T P + D + L + + PA++ S SR V G Y + +
Sbjct: 279 LTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARG--- 335
Query: 485 DIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 336 -VQSILQRYQELK 347
>gi|323144391|ref|ZP_08078999.1| ATP synthase F1, beta subunit [Succinatimonas hippei YIT 12066]
gi|322415844|gb|EFY06570.1| ATP synthase F1, beta subunit [Succinatimonas hippei YIT 12066]
Length = 472
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 244/361 (67%), Positives = 289/361 (80%), Gaps = 5/361 (1%)
Query: 557 IELFEINIIKYFRIINLKNNIS-----INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+E E NI + + +K + I +VQQQIG +VR IA G+++G+ R V+T
Sbjct: 25 VEFPETNIPEIHDALEVKGDGKNRPDLILEVQQQIGGGLVRCIAMGSSDGLSRGLTAVNT 84
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
G I PVG TLGRI+NVLG P+D G IN K++ IH P ++ Q +LETGIK
Sbjct: 85 GDGIKVPVGKETLGRIMNVLGQPVDEAGPINEKERWVIHREAPTYAEQSSTTEVLETGIK 144
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
VIDL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYH
Sbjct: 145 VIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIATAHSGLSVFTGVGERTREGNDFYH 204
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM+E+ V+DKVS+IYGQMNEP GNRLRVALTGL++AE+FR+ G DVLLFIDNIYR+TLAG
Sbjct: 205 EMQEAKVIDKVSMIYGQMNEPPGNRLRVALTGLTVAEKFRDEGLDVLLFIDNIYRYTLAG 264
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 265 TEVSALLGRMPSAVGYQPTLAEEMGVLQERIASTKKGSITSVQAVYVPADDLTDPSPATT 324
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+TIVLSRQIA LGIYPA+DPL+S S+QLDP IVG++HY+VA V+ LQ+YKELK
Sbjct: 325 FAHLDATIVLSRQIASLGIYPAVDPLDSTSRQLDPSIVGKDHYEVARGVQTVLQRYKELK 384
Query: 912 D 912
D
Sbjct: 385 D 385
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 145/330 (43%), Gaps = 23/330 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G T ++PVG E LGRI+N G+ +D K R + + AP ++
Sbjct: 74 GLSRGLTAVNTGDGIKVPVGKETLGRIMNVLGQPVDEAGPINEKERWVIHREAPTYAEQS 133
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N + + ++ +G
Sbjct: 134 STTEVLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIATAHSGLSVFTGVG 193
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ +D ++ + + TG T+ E FRD G D L+
Sbjct: 194 ERTREGNDFYHEMQEAKVIDKVSMIYGQMNEPPGNRLRVALTGLTVAEKFRDEGLDVLLF 253
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 254 IDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERIASTKK 300
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D I L + + PA++ S SR
Sbjct: 301 GSITSVQAVYVPADDLTDPSPATTFAHLDATIVLSRQIASLGIYPAVDPLDSTSRQLDPS 360
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESF 499
+ G Y++ + ++ +L +Y+EL+
Sbjct: 361 IVGKDHYEVARG----VQTVLQRYKELKDI 386
>gi|320539769|ref|ZP_08039430.1| F1 sector of membrane-bound ATP synthase, beta subunit [Serratia
symbiotica str. Tucson]
gi|320030172|gb|EFW12190.1| F1 sector of membrane-bound ATP synthase, beta subunit [Serratia
symbiotica str. Tucson]
Length = 460
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/361 (66%), Positives = 292/361 (80%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + + K + + ++N+ + +VQQQ+G +VR IA G ++G++R V +
Sbjct: 13 VVDVEFPQDAVPKVYDALEVENDTDKLVLEVQQQLGGGVVRCIAMGTSDGLRRGLKVNNL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
PI PVG TLGRI+NVLG+PID KG I ++ IH P + + +LETGIK
Sbjct: 73 EHPIEVPVGKATLGRIMNVLGEPIDMKGHIGEGERWAIHRPAPSYEELSSSQELLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
V+DL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EMK+SNVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAG
Sbjct: 193 EMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K E E+PVG LGRI+N GE ID K R + + AP +
Sbjct: 62 GLRRGLKVNNLEHPIEVPVGKATLGRIMNVLGEPIDMKGHIGEGERWAIHRPAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|423015278|ref|ZP_17005999.1| F0F1 ATP synthase subunit beta [Achromobacter xylosoxidans AXX-A]
gi|338781736|gb|EGP46117.1| F0F1 ATP synthase subunit beta [Achromobacter xylosoxidans AXX-A]
Length = 466
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG PI PVG TLGRI++VLG PID G
Sbjct: 47 EVQQQLGDGVVRTIALGSSDGLRRGMKVAGTGAPISVPVGTGTLGRIMDVLGRPIDEAGP 106
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++K IH P+F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 107 IQHEEKRGIHQAAPRFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 166
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEM+ESNVLDKV++++GQMNEP GNRLRVA
Sbjct: 167 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVA 226
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 227 LTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 286
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 287 RITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSS 346
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY VA V+ LQ+YKEL+D
Sbjct: 347 SRQLDPQVVGEEHYAVARGVQQTLQRYKELRD 378
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 148/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T +PVG LGRI++ G ID + + + + AP +
Sbjct: 67 GLRRGMKVAGTGAPISVPVGTGTLGRIMDVLGRPIDEAGPIQHEEKRGIHQAAPRFDELS 126
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 127 PSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 186
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 187 ERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFF 246
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 247 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 293
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 294 GSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSSSRQLDPQ 353
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y + + ++ L +Y+EL +L K + KI + Q
Sbjct: 354 VVGEEHYAVARG----VQQTLQRYKELRDIIAILGMDELSPEDKQAVARARKIQRFLSQP 409
Query: 528 PH 529
H
Sbjct: 410 FH 411
>gi|420253110|ref|ZP_14756173.1| ATP synthase, F1 beta subunit [Burkholderia sp. BT03]
gi|398052619|gb|EJL44868.1| ATP synthase, F1 beta subunit [Burkholderia sp. BT03]
Length = 464
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 238/356 (66%), Positives = 290/356 (81%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E N+ K + + L+ + +VQQQ+G+ IVRTI G+++G++R +V +T KPI
Sbjct: 21 VEFPRENLPKVYDALILEGSELTLEVQQQLGDGIVRTICLGSSDGLRRGVVVKNTAKPIS 80
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G I+++ IH P+F + +LETGIKVIDL+
Sbjct: 81 VPVGKPTLGRIMDVLGRPIDEAGPISTETTRSIHQKAPRFDELSPSTELLETGIKVIDLI 140
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 141 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 200
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA
Sbjct: 201 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSA 260
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMGKLQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 261 LLGRMPSAVGYQPTLAEEMGKLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLD 320
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+Q+DP+++GEEHY + V+ LQ+YKEL+D
Sbjct: 321 ATVVLSRDIASLGIYPAVDPLDSTSRQIDPHVIGEEHYSITRRVQQTLQRYKELRD 376
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 144/352 (40%), Gaps = 25/352 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T K +PVG LGRI++ G ID + ++ + AP + E L TGI
Sbjct: 75 TAKPISVPVGKPTLGRIMDVLGRPIDEAGPISTETTRSIHQKAPRFDELSPSTELLETGI 134
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID + P KG + + G GKT ++ I N K ++ +G++ +
Sbjct: 135 KVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFY 194
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
+++K N +D +V + + TG T+ E+FRD G D L D++ + A
Sbjct: 195 HEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLA 254
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P V Y L E K+ +++I + G++T+ +
Sbjct: 255 GTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKTGSITSVQAVY 301
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P D + L ++ + PA++ S SR V G Y I
Sbjct: 302 VPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPHVIGEEHYSIT 361
Query: 480 KKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
++ ++ L +Y+EL +L K + KI + Q H
Sbjct: 362 RR----VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQPFH 409
>gi|34500020|gb|AAQ73592.1| ATP synthase beta subunit [Actinobacillus delphinicola]
Length = 444
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 241/356 (67%), Positives = 289/356 (81%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K F + ++ + I +V+QQ+G VR IA G ++G+KR V + G PI
Sbjct: 16 VEFPQDAVPKVFDALKVETGL-ILEVEQQLGGGAVRCIAMGTSDGLKRGLSVENLGHPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG PID KG I ++++ IH P + +Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGQPIDQKGPIGAEEEWSIHRAAPSYEDQANSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
VLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 KVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSA GYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAGGYQPTLAEEMGGLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGI PA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGILPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGMLQRYKELKD 370
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 136/312 (43%), Gaps = 23/312 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG + LGRI+N G+ ID K + ++ + AP D+ + E L TGIK ID +
Sbjct: 75 VPVGTKTLGRIMNVLGQPIDQKGPIGAEEEWSIHRAAPSYEDQANSTELLETGIKVIDLI 134
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 194
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
+D +V + + TG T+ E FRD G+D L D++ ++ A ++S
Sbjct: 195 KVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P + L E + +++I + G++T+ + D+
Sbjct: 255 LLGRMPSAGGY-------QPTLAEEMGGL------QERITSTKTGSITSVQAVYVPADDL 301
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P + D + L + + PA++ S SR V G Y + + + G
Sbjct: 302 TDPSPATTFAHLDSTVVLSRQIASLGILPAVDPLDSTSRQLDPLVVGQEHYDVARGVQG- 360
Query: 486 IRIMLAQYRELE 497
ML +Y+EL+
Sbjct: 361 ---MLQRYKELK 369
>gi|384085857|ref|ZP_09997032.1| ATP synthase subunit beta [Acidithiobacillus thiooxidans ATCC
19377]
Length = 469
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/343 (68%), Positives = 284/343 (82%), Gaps = 1/343 (0%)
Query: 570 IINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILN 629
++ + N++I ++Q Q+G+ + R IA G + G+KR V TG PI PVG TLGRI++
Sbjct: 38 VVITEKNLTI-EIQAQLGDGVARGIAMGPSEGLKRGLAVARTGAPISVPVGHGTLGRIMD 96
Query: 630 VLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFG 689
VLGDP+D KG + ++++ IH P F + +LETGIKVIDL+CPF KGGK+GLFG
Sbjct: 97 VLGDPVDGKGPVQTEERKAIHRPAPSFDELAASTEVLETGIKVIDLVCPFAKGGKVGLFG 156
Query: 690 GAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQM 749
GAGVGKTV MMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S VLDKV+L YGQM
Sbjct: 157 GAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVLDKVALCYGQM 216
Query: 750 NEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQP 809
NEP GNRLRV LTGL++AE FR+ G+D+L+FIDNI+R+TLAGTEVSA+LGR PSAVGYQP
Sbjct: 217 NEPPGNRLRVGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLGRMPSAVGYQP 276
Query: 810 TLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELG 869
TLAEEMGKLQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELG
Sbjct: 277 TLAEEMGKLQERITSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELG 336
Query: 870 IYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IYPA+DPL+S+S+QLDP IVG+EHY VA + LQ+YKEL+D
Sbjct: 337 IYPALDPLDSFSRQLDPAIVGQEHYDVARSCQKTLQRYKELQD 379
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 142/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G+ +D K + R+ + + AP +
Sbjct: 67 EGLKRGLAVARTGAPISVPVGHGTLGRIMDVLGDPVDGKGPVQTEERKAIHRPAPSFDEL 126
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ E L TGIK ID + P KG + + G GKT + ++ I N ++ ++ +
Sbjct: 127 AASTEVLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGV 186
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ +D + + + TG T+ E+FRD G+D L+
Sbjct: 187 GERTREGNDFYHEMTDSGVLDKVALCYGQMNEPPGNRLRVGLTGLTMAEHFRDEGRDILM 246
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 247 FIDNIFRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTK 293
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 294 VGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPALDPLDSFSRQLDP 353
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + + L +Y+EL+
Sbjct: 354 AIVGQEHYDVARSC----QKTLQRYKELQ 378
>gi|293603080|ref|ZP_06685514.1| ATP synthase F1 sector beta subunit [Achromobacter piechaudii ATCC
43553]
gi|292818474|gb|EFF77521.1| ATP synthase F1 sector beta subunit [Achromobacter piechaudii ATCC
43553]
Length = 467
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG PI PVG TLGRI++VLG PID G
Sbjct: 48 EVQQQLGDGVVRTIALGSSDGLRRGMKVTGTGAPISVPVGTGTLGRIMDVLGRPIDEAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++K IH P+F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IQHEEKRGIHQSAPRFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEM+ESNVLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIASLGIYPAVDPLDSS 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY VA V+ LQ+YKEL+D
Sbjct: 348 SRQLDPQVVGEEHYAVARGVQQTLQRYKELRD 379
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 149/362 (41%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T +PVG LGRI++ G ID + + + + AP +
Sbjct: 68 GLRRGMKVTGTGAPISVPVGTGTLGRIMDVLGRPIDEAGPIQHEEKRGIHQSAPRFDELS 127
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 128 PSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 187
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 188 ERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFF 247
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 248 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 294
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 295 GSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIASLGIYPAVDPLDSSSRQLDPQ 354
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y + + ++ L +Y+EL +L K + KI + Q
Sbjct: 355 VVGEEHYAVARG----VQQTLQRYKELRDIIAILGMDELSPEDKQAVARARKIQRFLSQP 410
Query: 528 PH 529
H
Sbjct: 411 FH 412
>gi|421486350|ref|ZP_15933896.1| F0F1 ATP synthase subunit beta [Achromobacter piechaudii HLE]
gi|400195407|gb|EJO28397.1| F0F1 ATP synthase subunit beta [Achromobacter piechaudii HLE]
Length = 467
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG PI PVG TLGRI++VLG PID G
Sbjct: 48 EVQQQLGDGVVRTIALGSSDGLRRGMKVTGTGAPISVPVGTGTLGRIMDVLGRPIDEAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++K IH P+F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IQHEEKRGIHQSAPRFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEM+ESNVLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIASLGIYPAVDPLDSS 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY VA V+ LQ+YKEL+D
Sbjct: 348 SRQLDPQVVGEEHYAVARGVQQTLQRYKELRD 379
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 140/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T +PVG LGRI++ G ID + + + + AP +
Sbjct: 68 GLRRGMKVTGTGAPISVPVGTGTLGRIMDVLGRPIDEAGPIQHEEKRGIHQSAPRFDELS 127
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 128 PSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 187
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 188 ERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFF 247
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 248 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 294
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 295 GSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIASLGIYPAVDPLDSSSRQLDPQ 354
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + + ++ L +Y+EL
Sbjct: 355 VVGEEHYAVARG----VQQTLQRYKEL 377
>gi|157964051|ref|YP_001504085.1| F0F1 ATP synthase subunit beta [Shewanella pealeana ATCC 700345]
gi|189081346|sp|A8HAG3.1|ATPB_SHEPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|157849051|gb|ABV89550.1| ATP synthase F1, beta subunit [Shewanella pealeana ATCC 700345]
Length = 458
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/359 (65%), Positives = 291/359 (81%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + + + + +K+ + +VQQQ+G +VRTIA G+++G++R VV++G
Sbjct: 13 VVDVEFPHDAVPQVYDALEIKSEGLVLEVQQQLGGGVVRTIAMGSSDGLRRGLEVVNSGS 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI+NVLG+P+D G I + + IH P + +Q +LETGIKVI
Sbjct: 73 PITVPVGSATLGRIMNVLGEPVDEAGPIGEEDRYVIHREAPSYEDQSNTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFY+EM
Sbjct: 133 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYYEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTE 793
++S VLDKV+++YGQMNEP GNRLRVALTGL++AE+FR+ GKDVL F+DNIYR+TLAGTE
Sbjct: 193 EDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLFFVDNIYRYTLAGTE 252
Query: 794 VSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFT 853
VSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF
Sbjct: 253 VSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFA 312
Query: 854 HLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY VAN V+ LQ+YKELKD
Sbjct: 313 HLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVANGVQTVLQRYKELKD 371
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 153/359 (42%), Gaps = 25/359 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + +PVG LGRI+N GE +D ++R + + AP D+
Sbjct: 60 GLRRGLEVVNSGSPITVPVGSATLGRIMNVLGEPVDEAGPIGEEDRYVIHREAPSYEDQS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 NTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ +D +V + + TG T+ E FRD G+D L
Sbjct: 180 ERTREGNDFYYEMEDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLFF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPQ 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQ 526
V G Y + + ++ +L +Y+EL+ +L KT ++ KI + Q
Sbjct: 347 VVGQEHYDV----ANGVQTVLQRYKELKDIIAILGMDELSDEDKTTVFRARKIEKYLSQ 401
>gi|33598626|ref|NP_886269.1| F0F1 ATP synthase subunit beta [Bordetella parapertussis 12822]
gi|33603577|ref|NP_891137.1| F0F1 ATP synthase subunit beta [Bordetella bronchiseptica RB50]
gi|410422054|ref|YP_006902503.1| ATP synthase subunit beta [Bordetella bronchiseptica MO149]
gi|410474654|ref|YP_006897935.1| ATP synthase subunit beta [Bordetella parapertussis Bpp5]
gi|427816588|ref|ZP_18983652.1| ATP synthase beta chain [Bordetella bronchiseptica 1289]
gi|427820081|ref|ZP_18987144.1| ATP synthase beta chain [Bordetella bronchiseptica D445]
gi|427822670|ref|ZP_18989732.1| ATP synthase beta chain [Bordetella bronchiseptica Bbr77]
gi|81579009|sp|Q7W3B0.1|ATPB_BORPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|81836821|sp|Q7WEM9.1|ATPB_BORBR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|33574755|emb|CAE39414.1| ATP synthase beta chain [Bordetella parapertussis]
gi|33577702|emb|CAE34967.1| ATP synthase beta chain [Bordetella bronchiseptica RB50]
gi|408444764|emb|CCJ51538.1| ATP synthase beta chain [Bordetella parapertussis Bpp5]
gi|408449349|emb|CCJ61037.1| ATP synthase beta chain [Bordetella bronchiseptica MO149]
gi|410567588|emb|CCN25159.1| ATP synthase beta chain [Bordetella bronchiseptica 1289]
gi|410571081|emb|CCN19290.1| ATP synthase beta chain [Bordetella bronchiseptica D445]
gi|410587935|emb|CCN02985.1| ATP synthase beta chain [Bordetella bronchiseptica Bbr77]
Length = 466
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG PI PVG TLGRI++VLG PID G
Sbjct: 47 EVQQQLGDGVVRTIALGSSDGLRRGMQVAGTGAPISVPVGHGTLGRIMDVLGRPIDEAGP 106
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S +K IH P+F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 107 IASDEKRAIHQPAPRFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 166
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEM+ESNVLDKV++++GQMNEP GNRLRVA
Sbjct: 167 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVA 226
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 227 LTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 286
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 287 RITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSS 346
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY+VA V+ LQ+YKEL+D
Sbjct: 347 SRQLDPQVVGEEHYQVARGVQQTLQRYKELRD 378
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 148/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG LGRI++ G ID + + + AP +
Sbjct: 67 GLRRGMQVAGTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIASDEKRAIHQPAPRFDELS 126
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 127 PSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 186
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 187 ERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFF 246
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 247 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 293
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 294 GSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSSSRQLDPQ 353
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y++ + ++ L +Y+EL +L K + KI + Q
Sbjct: 354 VVGEEHYQVARG----VQQTLQRYKELRDIIAILGMDELSPEDKQAVARARKIQRFLSQP 409
Query: 528 PH 529
H
Sbjct: 410 FH 411
>gi|288939810|ref|YP_003442050.1| ATP synthase F1 subunit beta [Allochromatium vinosum DSM 180]
gi|288895182|gb|ADC61018.1| ATP synthase F1, beta subunit [Allochromatium vinosum DSM 180]
Length = 460
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T+G++R V TG PI PVG TLGRI++VLG+PID +GE
Sbjct: 40 EVQQQLGDGVVRTIAMGSTDGLQRGVDVTATGAPIQVPVGQATLGRIMDVLGNPIDEQGE 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ S+ + IH PK +Q + ILETGIKVIDL+ P KGGK+GLFGGAGVGKTV +M
Sbjct: 100 VKSEARWSIHRQAPKLEDQAASTEILETGIKVIDLIMPIAKGGKVGLFGGAGVGKTVTLM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA+EH G SVF GVGER+REGNDFYHEMK+ VLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAVEHSGFSVFAGVGERTREGNDFYHEMKDGGVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVL+FIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLA EMG LQE
Sbjct: 220 LTGLTMAEYFRDEGRDVLMFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+ST+ G+ITS QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELGIYPA+DPL+S
Sbjct: 280 RITSTRTGSITSFQAVYVPADDLTDPSPATTFAHLDATLVLSRQIAELGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+ LDP +VG EHY+ A V+ LQ+YKELKD
Sbjct: 340 SRILDPNVVGTEHYETARAVQGTLQRYKELKD 371
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T ++PVG LGRI++ G ID + + + R ++ + AP + D+
Sbjct: 60 GLQRGVDVTATGAPIQVPVGQATLGRIMDVLGNPIDEQGEVKSEARWSIHRQAPKLEDQA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID ++PI KG + + G GKT ++ I N + ++ +G
Sbjct: 120 ASTEILETGIKVIDLIMPIAKGGKVGLFGGAGVGKTVTLMELIRNIAVEHSGFSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K +D +V + + TG T+ EYFRD G+D L+
Sbjct: 180 ERTREGNDFYHEMKDGGVLDKVALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLMF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + L ER I +
Sbjct: 240 IDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQER-------------ITSTRT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+F + D+T P + D + L + PA++ S SR
Sbjct: 287 GSITSFQAVYVPADDLTDPSPATTFAHLDATLVLSRQIAELGIYPAVDPLDSTSRILDPN 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + + G L +Y+EL+
Sbjct: 347 VVGTEHYETARAVQG----TLQRYKELK 370
>gi|254788506|ref|YP_003075935.1| F0F1 ATP synthase subunit alpha [Teredinibacter turnerae T7901]
gi|259585438|sp|C5BKJ7.1|ATPA_TERTT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|237685526|gb|ACR12790.1| ATP synthase F1, alpha subunit [Teredinibacter turnerae T7901]
Length = 513
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 226/403 (56%), Positives = 309/403 (76%), Gaps = 2/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D + + +GQ C CT +I E+PVG EL GR+V++ G ID K K + +EKI
Sbjct: 74 AVILGDYQGVAEGQTCKCTGRILEVPVGPELQGRVVDALGNPIDGKGPIDAKATDAIEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ G+K++D+M+PIG+GQRELIIGDRQTGKT IA+D IINQK +
Sbjct: 134 APGVIARQSVDQPVQIGLKAVDTMVPIGRGQRELIIGDRQTGKTAIAVDAIINQKGTGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ +V+ KL+ + MD+T+VVAATA+D A+ Q+++P+ GCT+GEY+RD
Sbjct: 194 CIYVAIGQKASSIASVVRKLEEHGAMDHTIVVAATASDPASMQFLAPFAGCTMGEYYRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+DCLIIYDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N +EK
Sbjct: 254 GEDCLIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNAAHVEKY 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+++LFN+ RPA+N G+
Sbjct: 314 TNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESDLFNAGIRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGG+AQ K++KKLSG IR LAQYREL +F++F+SDLD TK QL +G++++ LMK
Sbjct: 374 SVSRVGGSAQTKVIKKLSGGIRTALAQYRELAAFAQFASDLDEATKAQLNHGQRVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
QK + S+ E+ +++ F + + ++ FE +++ Y
Sbjct: 434 QKQYSPQSVAEMAVVVYAANEGFLEDVEVAKMGAFESSLLSYM 476
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 151/342 (44%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ G+ TG+ + PVG GR+++ LG+PID KG I++K I
Sbjct: 72 VGAVILGDYQGVAEGQTCKCTGRILEVPVGPELQGRVVDALGNPIDGKGPIDAKATDAIE 131
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++ G+K +D + P +G + + G GKT ++ I I
Sbjct: 132 KIAPGVIARQSVDQPVQIGLKAVDTMVPIGRGQRELIIGDRQTGKTAIAVDAI----INQ 187
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG + ++ +G+++ +++E +D ++ ++P+ + G ++
Sbjct: 188 KGTGIKCIYVAIGQKASSIASVVRKLEEHGAMDHTIVVAATASDPASMQFLAPFAGCTMG 247
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E +R+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 248 EYYRDRGEDCLIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNA 307
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
+ G++T++ I A D++ P+ + D I L + GI P
Sbjct: 308 AHVEKYTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESDLFNAGIRP 367
Query: 873 AIDPLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
A++ S S+ + G KV + ++ L +Y+EL
Sbjct: 368 AMNAGISVSR-----VGGSAQTKVIKKLSGGIRTALAQYREL 404
>gi|190575942|ref|YP_001973787.1| F0F1 ATP synthase subunit beta [Stenotrophomonas maltophilia K279a]
gi|424670256|ref|ZP_18107281.1| ATP synthase subunit beta [Stenotrophomonas maltophilia Ab55555]
gi|226740680|sp|B2FHY8.1|ATPB_STRMK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|190013864|emb|CAQ47502.1| putative ATP synthase beta chain [Stenotrophomonas maltophilia
K279a]
gi|401070714|gb|EJP79228.1| ATP synthase subunit beta [Stenotrophomonas maltophilia Ab55555]
gi|456734924|gb|EMF59694.1| ATP synthase beta chain [Stenotrophomonas maltophilia EPM1]
Length = 468
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 238/362 (65%), Positives = 288/362 (79%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + ++N +VQQQ+G+ +VRTIA G+T+G+KRN + V+TG+ I
Sbjct: 16 VEFPRESVPKVYDALKVENTEITLEVQQQLGDGVVRTIALGSTDGLKRNLVAVNTGRGIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G + + IH P + +Q +LETGIKVIDL+
Sbjct: 76 VPVGAGTLGRIMDVLGRPIDEAGPVAASDSWEIHRAAPSYEDQSPATELLETGIKVIDLM 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
NVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLF+DNIYR+TLA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLA 255
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STKNG+ITS+QA+YVPADDLTDPSP+T
Sbjct: 256 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKNGSITSIQAVYVPADDLTDPSPAT 315
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLDST+ LSR IA LGIYPA+DPL+S S+Q+DP ++G EHY A V+ LQKYKEL
Sbjct: 316 TFAHLDSTVTLSRSIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375
Query: 911 KD 912
KD
Sbjct: 376 KD 377
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 29/324 (8%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T + +PVG LGRI++ G ID + + + AP D+ E L TGI
Sbjct: 70 TGRGISVPVGAGTLGRIMDVLGRPIDEAGPVAASDSWEIHRAAPSYEDQSPATELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 130 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDL 358
+++K N +D +V + + TG T+ EYFRD G+D L+ D++
Sbjct: 190 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNI 249
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P V Y L E + +++I + NG++T
Sbjct: 250 YRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKNGSIT 296
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L ++ + PA++ S SR V G
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDSTVTLSRSIASLGIYPAVDPLDSTSRQMDPLVIGH 356
Query: 474 AQYKIVKKLSGDIRIMLAQYRELE 497
Y ++ ++ L +Y+EL+
Sbjct: 357 EHYDTAQR----VQQTLQKYKELK 376
>gi|119896451|ref|YP_931664.1| F0F1 ATP synthase subunit beta [Azoarcus sp. BH72]
gi|166201689|sp|A1K1S2.1|ATPB_AZOSB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|119668864|emb|CAL92777.1| ATP synthase beta chain [Azoarcus sp. BH72]
Length = 466
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V +TGKPI PVG TLGRI++VLG PID G
Sbjct: 47 EVQQQLGDGVVRTIALGSSDGLRRGMKVSNTGKPISVPVGHGTLGRIMDVLGRPIDEAGP 106
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ + + IH PKF + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 107 VETDELRAIHQKAPKFDELSPSVELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 166
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 167 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 226
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQE
Sbjct: 227 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 286
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 287 RITSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 346
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY VA V+ LQKYKEL+D
Sbjct: 347 SRQLDPLVVGEEHYSVARAVQQTLQKYKELRD 378
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 135/327 (41%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T K +PVG LGRI++ G ID + + AP +
Sbjct: 67 GLRRGMKVSNTGKPISVPVGHGTLGRIMDVLGRPIDEAGPVETDELRAIHQKAPKFDELS 126
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 127 PSVELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 186
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 187 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 246
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + RL ER I +
Sbjct: 247 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKV 293
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 294 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPL 353
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + + ++ L +Y+EL
Sbjct: 354 VVGEEHYSVARA----VQQTLQKYKEL 376
>gi|221135161|ref|ZP_03561464.1| F0F1 ATP synthase subunit beta [Glaciecola sp. HTCC2999]
Length = 460
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR+IA G T+G++R V +T PI PVG TLGRI++VLG+PID G
Sbjct: 43 EVQQQLGGGVVRSIALGTTDGLRRGLAVDNTNAPIQVPVGTKTLGRIMDVLGNPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEEERMSIHREAPSYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 283 RITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY A V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVVGQEHYDTAQGVQTTLQRYKELKD 374
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 140/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T ++PVG + LGRI++ G ID + R ++ + AP ++
Sbjct: 63 GLRRGLAVDNTNAPIQVPVGTKTLGRIMDVLGNPIDEAGPIGEEERMSIHREAPSYEEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 123 SSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 183 ERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 243 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKK 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPL 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ L +Y+EL+
Sbjct: 350 VVGQEHYDTAQG----VQTTLQRYKELK 373
>gi|340780777|ref|YP_004747384.1| ATP synthase subunit beta [Acidithiobacillus caldus SM-1]
gi|340554930|gb|AEK56684.1| ATP synthase beta chain [Acidithiobacillus caldus SM-1]
Length = 469
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 232/332 (69%), Positives = 277/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
++Q Q+G+ + R IA G + G+KR V TG I PVG TLGRI+NVLGDP+D KG+
Sbjct: 48 EIQTQLGDGVARGIAMGASEGLKRGLKVRRTGAAISVPVGHGTLGRIMNVLGDPVDGKGD 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ +++PIH P F + ILETG+KVIDL+CPF KGGK+GLFGGAGVGKTV MM
Sbjct: 108 VQCDQRTPIHRAAPAFDELAASTEILETGVKVIDLVCPFAKGGKVGLFGGAGVGKTVLMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF G+GER+REGNDFYHEM ES VLDKV+L YGQMNEP GNRLRV
Sbjct: 168 ELIRNIAIEHTGYSVFAGIGERTREGNDFYHEMTESKVLDKVALCYGQMNEPPGNRLRVG 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L+FIDNI+R+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADD+TDPSP+TTF HLD+T+VLSRQIAELGIYPA+DPL+S+
Sbjct: 288 RITSTKVGSITSVQAVYVPADDITDPSPATTFAHLDATVVLSRQIAELGIYPALDPLDSF 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP IVG+EHY VA + LQ+YKEL+D
Sbjct: 348 SRQLDPQIVGQEHYDVARACQKTLQRYKELQD 379
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 148/353 (41%), Gaps = 41/353 (11%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G K T +PVG LGRI+N G+ +D K R + + AP +
Sbjct: 67 EGLKRGLKVRRTGAAISVPVGHGTLGRIMNVLGDPVDGKGDVQCDQRTPIHRAAPAFDEL 126
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ E L TG+K ID + P KG + + G GKT + ++ I N ++ ++ I
Sbjct: 127 AASTEILETGVKVIDLVCPFAKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGI 186
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ +D + + + TG T+ E+FRD G+D L+
Sbjct: 187 GERTREGNDFYHEMTESKVLDKVALCYGQMNEPPGNRLRVGLTGLTMAEHFRDEGRDILM 246
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 247 FIDNIFRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTK 293
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 294 VGSITSVQAVYVPADDITDPSPATTFAHLDATVVLSRQIAELGIYPALDPLDSFSRQLDP 353
Query: 470 -VGGAAQYKIVK----------------------KLSGDIRIMLAQYRELESF 499
+ G Y + + +LS D ++++A+ R+++ F
Sbjct: 354 QIVGQEHYDVARACQKTLQRYKELQDIIAILGMDELSADDKVLVARARKIQRF 406
>gi|311103598|ref|YP_003976451.1| ATP synthase F1 subunit beta [Achromobacter xylosoxidans A8]
gi|310758287|gb|ADP13736.1| ATP synthase F1, beta subunit [Achromobacter xylosoxidans A8]
Length = 466
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG PI PVG TLGRI++VLG PID G
Sbjct: 47 EVQQQLGDGVVRTIALGSSDGLRRGMKVTGTGAPISVPVGTGTLGRIMDVLGRPIDEAGP 106
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++K IH P+F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 107 IQHEEKRGIHQPAPRFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 166
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEM+ESNVLDKV++++GQMNEP GNRLRVA
Sbjct: 167 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVA 226
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 227 LTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 286
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 287 RITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSS 346
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY VA V+ LQ+YKEL+D
Sbjct: 347 SRQLDPQVVGEEHYAVARGVQQTLQRYKELRD 378
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 148/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T +PVG LGRI++ G ID + + + + AP +
Sbjct: 67 GLRRGMKVTGTGAPISVPVGTGTLGRIMDVLGRPIDEAGPIQHEEKRGIHQPAPRFDELS 126
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 127 PSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 186
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 187 ERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFF 246
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 247 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 293
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 294 GSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSSSRQLDPQ 353
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y + + ++ L +Y+EL +L K + KI + Q
Sbjct: 354 VVGEEHYAVARG----VQQTLQRYKELRDIIAILGMDELSPEDKQAVARARKIQRFLSQP 409
Query: 528 PH 529
H
Sbjct: 410 FH 411
>gi|28198344|ref|NP_778658.1| ATP synthase F0F1 subunit beta [Xylella fastidiosa Temecula1]
gi|182680985|ref|YP_001829145.1| F0F1 ATP synthase subunit beta [Xylella fastidiosa M23]
gi|386084506|ref|YP_006000788.1| F0F1 ATP synthase subunit beta [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|417558896|ref|ZP_12209855.1| F0F1-type ATP synthase beta subunit [Xylella fastidiosa EB92.1]
gi|81839548|sp|Q87E90.1|ATPB_XYLFT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740693|sp|B2I877.1|ATPB_XYLF2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|28056414|gb|AAO28307.1| ATP synthase beta chain [Xylella fastidiosa Temecula1]
gi|71728981|gb|EAO31112.1| ATP synthase F1, beta subunit [Xylella fastidiosa Ann-1]
gi|182631095|gb|ACB91871.1| ATP synthase F1, beta subunit [Xylella fastidiosa M23]
gi|307579453|gb|ADN63422.1| F0F1 ATP synthase subunit beta [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|338178478|gb|EGO81464.1| F0F1-type ATP synthase beta subunit [Xylella fastidiosa EB92.1]
Length = 466
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/365 (66%), Positives = 286/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
I +E N+ K + + + I +VQQQ+G+ IVRTIA G+T+G+KRN I DTG
Sbjct: 13 IVDVEFPRNNVPKVYNALKIDGTAIILEVQQQLGDGIVRTIALGSTDGLKRNLIATDTGH 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
I PVG TLGRI++VLG+PID G I + IH P + +Q +LETGIKVI
Sbjct: 73 AITVPVGTGTLGRIMDVLGNPIDEAGPITYTDQWEIHRNAPSYEDQASTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLFIDNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDSSGKGKDVLLFIDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+ST NG+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTANGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLDST+ LSR IA LGIYPA+DPL+S S+Q+DP I+GEEHY V+ LQKY
Sbjct: 313 PATTFGHLDSTVTLSRSIAALGIYPAVDPLDSSSRQMDPLIIGEEHYNTTQRVQQTLQKY 372
Query: 908 KELKD 912
K+LKD
Sbjct: 373 KDLKD 377
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 150/348 (43%), Gaps = 35/348 (10%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID ++ + + AP D+ S E L TGIK ID M
Sbjct: 76 VPVGTGTLGRIMDVLGNPIDEAGPITYTDQWEIHRNAPSYEDQASTTELLETGIKVIDLM 135
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K + + ++ +G++ + +++K
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDLTKHAWA 364
N +D +V + + TG T+ EYFRD G+D L+ D++ ++ A
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDSSGKGKDVLLFIDNIYRYTLA 255
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P + L E + +++I + NG++T+ +
Sbjct: 256 GTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTANGSITSIQAVY 302
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P D + L ++ PA++ S SR + G Y
Sbjct: 303 VPADDLTDPSPATTFGHLDSTVTLSRSIAALGIYPAVDPLDSSSRQMDPLIIGEEHYNTT 362
Query: 480 KKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMKQK 527
++ ++ L +Y++L+ + I+ +L +K+S+ +K
Sbjct: 363 QR----VQQTLQKYKDLKDI------IAILGMDELSEDDKLSVSRARK 400
>gi|15837745|ref|NP_298433.1| ATP synthase F0F1 subunit beta [Xylella fastidiosa 9a5c]
gi|81623765|sp|Q9PE85.1|ATPB_XYLFA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|9106107|gb|AAF83953.1|AE003950_3 ATP synthase, beta chain [Xylella fastidiosa 9a5c]
Length = 466
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/365 (66%), Positives = 286/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
I +E N+ K + + + I +VQQQ+G+ IVRTIA G+T+G+KRN I DTG
Sbjct: 13 IVDVEFPRNNVPKVYNALKIDGTAIILEVQQQLGDGIVRTIALGSTDGLKRNLIATDTGH 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
I PVG TLGRI++VLG+PID G I + IH P + +Q +LETGIKVI
Sbjct: 73 AITVPVGTGTLGRIMDVLGNPIDEAGPITYTDQWEIHRNAPSYEDQASTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLFIDNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDSSGKGKDVLLFIDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+ST NG+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTANGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLDST+ LSR IA LGIYPA+DPL+S S+Q+DP I+GEEHY V+ LQKY
Sbjct: 313 PATTFGHLDSTVTLSRSIAALGIYPAVDPLDSSSRQMDPLIIGEEHYNTTQRVQQTLQKY 372
Query: 908 KELKD 912
K+LKD
Sbjct: 373 KDLKD 377
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 138/318 (43%), Gaps = 29/318 (9%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID ++ + + AP D+ S E L TGIK ID M
Sbjct: 76 VPVGTGTLGRIMDVLGNPIDEAGPITYTDQWEIHRNAPSYEDQASTTELLETGIKVIDLM 135
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K + + ++ +G++ + +++K
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDLTKHAWA 364
N +D +V + + TG T+ EYFRD G+D L+ D++ ++ A
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDSSGKGKDVLLFIDNIYRYTLA 255
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P + L E + +++I + NG++T+ +
Sbjct: 256 GTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTANGSITSIQAVY 302
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P D + L ++ PA++ S SR + G Y
Sbjct: 303 VPADDLTDPSPATTFGHLDSTVTLSRSIAALGIYPAVDPLDSSSRQMDPLIIGEEHYNTT 362
Query: 480 KKLSGDIRIMLAQYRELE 497
++ ++ L +Y++L+
Sbjct: 363 QR----VQQTLQKYKDLK 376
>gi|412341099|ref|YP_006969854.1| ATP synthase subunit beta [Bordetella bronchiseptica 253]
gi|408770933|emb|CCJ55732.1| ATP synthase beta chain [Bordetella bronchiseptica 253]
Length = 466
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG PI PVG TLGRI++VLG PID G
Sbjct: 47 EVQQQLGDGVVRTIALGSSDGLRRGMQVARTGAPISVPVGHGTLGRIMDVLGRPIDEAGP 106
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S +K IH P+F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 107 IASDEKRAIHQPAPRFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 166
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEM+ESNVLDKV++++GQMNEP GNRLRVA
Sbjct: 167 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVA 226
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 227 LTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 286
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 287 RITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSS 346
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY+VA V+ LQ+YKEL+D
Sbjct: 347 SRQLDPQVVGEEHYQVARGVQQTLQRYKELRD 378
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 148/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG LGRI++ G ID + + + AP +
Sbjct: 67 GLRRGMQVARTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIASDEKRAIHQPAPRFDELS 126
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 127 PSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 186
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 187 ERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFF 246
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 247 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 293
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 294 GSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSSSRQLDPQ 353
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y++ + ++ L +Y+EL +L K + KI + Q
Sbjct: 354 VVGEEHYQVARG----VQQTLQRYKELRDIIAILGMDELSPEDKQAVARARKIQRFLSQP 409
Query: 528 PH 529
H
Sbjct: 410 FH 411
>gi|325460125|gb|ADZ14055.1| ATP synthase beta chain [Burkholderia terrae]
Length = 365
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/355 (67%), Positives = 289/355 (81%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E N+ K + + L+ + +VQQQ+G+ IVRTI G+++G++R +V +T KPI
Sbjct: 11 VEFPRENMPKVYDALILEGSDLTLEVQQQLGDGIVRTICLGSSDGLRRGVVVKNTAKPIS 70
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G I+S+ IH PKF + +LETGIKVIDL+
Sbjct: 71 VPVGKATLGRIMDVLGRPIDEAGPISSETTRSIHQKAPKFDELSPSTELLETGIKVIDLI 130
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 131 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 190
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA
Sbjct: 191 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSA 250
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMGKLQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 251 LLGRMPSAVGYQPTLAEEMGKLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLD 310
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
+T+VLSR IA LGIYPA+DPL+S S+Q+DP+++GEEHY + V+ LQ+YKEL+
Sbjct: 311 ATVVLSRDIASLGIYPAVDPLDSTSRQIDPHVIGEEHYNITRGVQQTLQRYKELR 365
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 134/317 (42%), Gaps = 23/317 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T K +PVG LGRI++ G ID + ++ + AP + E L TGI
Sbjct: 65 TAKPISVPVGKATLGRIMDVLGRPIDEAGPISSETTRSIHQKAPKFDELSPSTELLETGI 124
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID + P KG + + G GKT ++ I N K ++ +G++ +
Sbjct: 125 KVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFY 184
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
+++K N +D +V + + TG T+ E+FRD G D L D++ + A
Sbjct: 185 HEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLA 244
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P V Y L E K+ +++I + G++T+ +
Sbjct: 245 GTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKTGSITSVQAVY 291
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P D + L ++ + PA++ S SR V G Y I
Sbjct: 292 VPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPHVIGEEHYNIT 351
Query: 480 KKLSGDIRIMLAQYREL 496
+ ++ L +Y+EL
Sbjct: 352 RG----VQQTLQRYKEL 364
>gi|389721239|ref|ZP_10187993.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. HA]
gi|388609069|gb|EIM38263.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. HA]
Length = 464
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/360 (66%), Positives = 292/360 (81%), Gaps = 7/360 (1%)
Query: 560 FEINII-KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTP 618
FE N + K + + + + +VQQQ+G+ +VRTIA G+T G+KR V +T PI P
Sbjct: 18 FERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNVTNTNAPISVP 77
Query: 619 VGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCP 678
VG TLGRI++VLG PID G + ++++ PIH P ++ Q + ++LETGIKVIDLLCP
Sbjct: 78 VGTATLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLETGIKVIDLLCP 137
Query: 679 FLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV 738
F KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+SNV
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNV 197
Query: 739 LDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGT 792
LDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGT
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVDNIYRYTLAGT 257
Query: 793 EVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTF 852
EVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+TTF
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTF 317
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA GIYPAIDPL+S S+QLDP +VG+EHY++A V+ LQ+YKELKD
Sbjct: 318 AHLDATVVLSRDIASQGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKELKD 377
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 179/420 (42%), Gaps = 39/420 (9%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+ + ++++F N+V + Q++GT E Q G V + + + L +G
Sbjct: 8 QIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNV 67
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T +PVG LGRI++ G ID + R + + AP ++ + + L T
Sbjct: 68 TNTNAPISVPVGTATLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLET 127
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 128 GIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 187
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL------GQDCLIIYD 356
+++K N +D +V + + TG T+ EYFRD G+D L+ D
Sbjct: 188 FYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVD 247
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P V Y L E + +++I + +G+
Sbjct: 248 NIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKSGS 294
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VG 471
+T+ + D+T P + D + L ++ + PAI+ S SR V
Sbjct: 295 ITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAIDPLDSTSRQLDPLVV 354
Query: 472 GAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
G Y+I + ++ +L +Y+EL+ +L K +Y KI Q H
Sbjct: 355 GQEHYEIARS----VQNVLQRYKELKDIIAILGMDELSEEDKLIVYRARKIQRFFSQPFH 410
>gi|431930555|ref|YP_007243601.1| ATP synthase F1 subunit beta [Thioflavicoccus mobilis 8321]
gi|431828858|gb|AGA89971.1| ATP synthase, F1 beta subunit [Thioflavicoccus mobilis 8321]
Length = 458
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 278/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ + R IA G+T+G++R V TG PI PVG TLGRI++VLGDPID KGE
Sbjct: 40 EVQQQLGDGVARAIAMGSTDGLRRGLSVSSTGAPISVPVGTETLGRIMDVLGDPIDEKGE 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ + ++ IH PK +Q + +LETGIKVIDL+ P KGGK+GLFGGAGVGKTV +M
Sbjct: 100 VPTAERWSIHREAPKLEDQATSTEVLETGIKVIDLIMPIAKGGKVGLFGGAGVGKTVTLM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA EH G SVF GVGER+REGNDFYHEM ES VLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAAEHSGYSVFAGVGERTREGNDFYHEMTESGVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR G+DVL+FIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQE
Sbjct: 220 LTGLTMAEFFREEGRDVLMFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+ST+ G+ITS QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELGIYPA+DPL+S
Sbjct: 280 RITSTRTGSITSFQAVYVPADDLTDPSPATTFAHLDATLVLSRQIAELGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+ LDP +VG+EHY+ A V+ LQ+YKELKD
Sbjct: 340 SRILDPNVVGQEHYETARAVQGTLQRYKELKD 371
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 147/336 (43%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L +G T +PVG E LGRI++ G+ ID K + R ++ +
Sbjct: 52 AIAMGSTDGLRRGLSVSSTGAPISVPVGTETLGRIMDVLGDPIDEKGEVPTAERWSIHRE 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP + D+ + E L TGIK ID ++PI KG + + G GKT ++ I N +
Sbjct: 112 APKLEDQATSTEVLETGIKVIDLIMPIAKGGKVGLFGGAGVGKTVTLMELIRNIAAEHSG 171
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++ +D +V + + TG T+ E+FR+
Sbjct: 172 YSVFAGVGERTREGNDFYHEMTESGVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRE 231
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L+ D++ ++ A ++S LL R P + + RL ER
Sbjct: 232 EGRDVLMFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER----------- 280
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
I + G++T+F + D+T P + D + L + PA++ S
Sbjct: 281 --ITSTRTGSITSFQAVYVPADDLTDPSPATTFAHLDATLVLSRQIAELGIYPAVDPLDS 338
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y+ + + G L +Y+EL+
Sbjct: 339 TSRILDPNVVGQEHYETARAVQG----TLQRYKELK 370
>gi|399546904|ref|YP_006560212.1| ATP synthase subunit beta [Marinobacter sp. BSs20148]
gi|399162236|gb|AFP32799.1| ATP synthase subunit beta [Marinobacter sp. BSs20148]
Length = 464
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR +T +PI PVG TLGRI++VLG PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLRAENTHEPISVPVGTQTLGRIMDVLGRPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P +++Q + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERWAIHRKAPGYADQAASADLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFY+EMK+SNVLDKV+++YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKEHSGLSVFAGVGERTREGNDFYYEMKDSNVLDKVAMVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL+IAE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLA+EMG+LQE
Sbjct: 220 LTGLTIAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAQEMGELQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITS+QA+YVPADDLTDPSP+TTF+HLD+T+VLSR IA GIYPAIDPL+S
Sbjct: 280 RITSTKNGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRDIASKGIYPAIDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++GE+HY VA V+ LQ+YKELKD
Sbjct: 340 SRQLDPLVIGEQHYAVARGVQNVLQRYKELKD 371
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 145/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + T + +PVG + LGRI++ G ID + R + + APG D+
Sbjct: 59 EGLKRGLRAENTHEPISVPVGTQTLGRIMDVLGRPIDEAGPIGEEERWAIHRKAPGYADQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ + L TGIK ID + P KG + + G GKT ++ I N K + + ++ +
Sbjct: 119 AASADLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + ++K N +D +V + + TG TI E FRD G+D L
Sbjct: 179 GERTREGNDFYYEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLF 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + + L ER I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAQEMGELQER-------------ITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
NG++T+ + D+T P S D + L ++ + PAI+ S SR
Sbjct: 286 NGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRDIASKGIYPAIDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 346 LVIGEQHYAVARG----VQNVLQRYKELK 370
>gi|359800238|ref|ZP_09302786.1| F0F1 ATP synthase subunit beta [Achromobacter arsenitoxydans SY8]
gi|359361797|gb|EHK63546.1| F0F1 ATP synthase subunit beta [Achromobacter arsenitoxydans SY8]
Length = 466
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG PI PVG TLGRI++VLG PID G
Sbjct: 47 EVQQQLGDGVVRTIALGSSDGLRRGMKVTGTGAPISVPVGTGTLGRIMDVLGRPIDEAGP 106
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++K IH P+F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 107 IQHEEKRGIHQPAPRFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 166
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEM+ESNVLDKV++++GQMNEP GNRLRVA
Sbjct: 167 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVA 226
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 227 LTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 286
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 287 RITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSS 346
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY VA V+ LQ+YKEL+D
Sbjct: 347 SRQLDPQVVGEEHYAVARGVQQTLQRYKELRD 378
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 148/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T +PVG LGRI++ G ID + + + + AP +
Sbjct: 67 GLRRGMKVTGTGAPISVPVGTGTLGRIMDVLGRPIDEAGPIQHEEKRGIHQPAPRFDELS 126
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 127 PSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 186
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 187 ERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFF 246
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 247 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 293
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 294 GSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSSSRQLDPQ 353
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y + + ++ L +Y+EL +L K + KI + Q
Sbjct: 354 VVGEEHYAVARG----VQQTLQRYKELRDIIAILGMDELSPEDKQAVARARKIQRFLSQP 409
Query: 528 PH 529
H
Sbjct: 410 FH 411
>gi|163854647|ref|YP_001628945.1| ATP synthase F0F1 subunit beta [Bordetella petrii DSM 12804]
gi|190358261|sp|A9HY42.1|ATPB_BORPD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|163258375|emb|CAP40674.1| ATP synthase beta chain [Bordetella petrii]
Length = 466
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R VV TG PI PVG TLGRI++VLG PID G
Sbjct: 47 EVQQQLGDGVVRTIALGSSDGLRRGMKVVGTGAPISVPVGHGTLGRIMDVLGRPIDEAGP 106
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S +K IH P+F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 107 IESDEKRAIHQTAPRFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 166
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEM+ES VLDKV++++GQMNEP GNRLRVA
Sbjct: 167 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMEESKVLDKVAMVFGQMNEPPGNRLRVA 226
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 227 LTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 286
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 287 RITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSS 346
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY VA V+ LQ+YKEL+D
Sbjct: 347 SRQLDPQVVGEEHYAVARGVQQTLQRYKELRD 378
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 137/327 (41%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T +PVG LGRI++ G ID + + + AP +
Sbjct: 67 GLRRGMKVVGTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIESDEKRAIHQTAPRFDELS 126
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 127 PSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 186
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ +D +V + + TG T+ E FRD G+D L
Sbjct: 187 ERTREGNDFYHEMEESKVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFF 246
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 247 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 293
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 294 GSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSSSRQLDPQ 353
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + + ++ L +Y+EL
Sbjct: 354 VVGEEHYAVARG----VQQTLQRYKEL 376
>gi|417950979|ref|ZP_12594091.1| F0F1 ATP synthase subunit beta [Vibrio splendidus ATCC 33789]
gi|342805521|gb|EGU40780.1| F0F1 ATP synthase subunit beta [Vibrio splendidus ATCC 33789]
Length = 461
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 278/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G NIVR IA G ++G++R V +TG PI PVG+ TLGRI+NVLG PID GE
Sbjct: 43 EVQQQLGGNIVRCIAMGTSDGLRRGLTVENTGSPITVPVGEETLGRIMNVLGQPIDECGE 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I K+ IH P + Q + +LETG+KVIDL+CPF KGGKIGLFGGAGVGKTVNMM
Sbjct: 103 IGQKENYEIHREAPSYEEQANSTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFY+EMKE+ VLDKV+++YGQMNEP GNRLRVA
Sbjct: 163 ELINNIAKAHSGLSVFTGVGERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LG+YPAIDPL+S
Sbjct: 283 RITSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP IVG+EHY +A V+ LQ+YKELKD
Sbjct: 343 SRQLDPLIVGQEHYDIAQTVQTTLQRYKELKD 374
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 146/346 (42%), Gaps = 25/346 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG E LGRI+N G+ ID + K + + AP ++ + E L TG+K ID +
Sbjct: 79 VPVGEETLGRIMNVLGQPIDECGEIGQKENYEIHREAPSYEEQANSTELLETGVKVIDLI 138
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K + + ++ +G++ + ++K
Sbjct: 139 CPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTGVGERTREGNDFYYEMKEA 198
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
+D +V + + TG T+ E FRD G+D L+ D++ ++ A ++S
Sbjct: 199 GVLDKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSA 258
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P + L E + +++I + G++T+ + D+
Sbjct: 259 LLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKQGSITSIQAVYVPADDL 305
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P + D + L N+ PAI+ S SR + G Y I +
Sbjct: 306 TDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPLIVGQEHYDIAQT---- 361
Query: 486 IRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
++ L +Y+EL+ +L K + KI + Q H
Sbjct: 362 VQTTLQRYKELKDIIAILGMDELSTEDKQVVSRARKIERFLTQPYH 407
>gi|451822775|ref|YP_007459049.1| F-type H+-transporting ATPase subunit beta [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451775575|gb|AGF46616.1| F-type H+-transporting ATPase subunit beta [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 468
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/334 (71%), Positives = 282/334 (84%)
Query: 579 INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNK 638
I +VQQQ+G+ +VRTIA G+++G+ R T KPI PVGD TLGRI+NVLG+PID
Sbjct: 45 ILEVQQQLGDGVVRTIALGSSDGLSRGMRFNRTHKPISVPVGDGTLGRIMNVLGNPIDQA 104
Query: 639 GEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVN 698
G I ++K PIH P F + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVN
Sbjct: 105 GPILHEEKRPIHRDAPLFEDLSSSIELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVN 164
Query: 699 MMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLR 758
MMELI NIA +H G SVF GVGER+REGNDFYHEM ES VLDKVS+++GQMNEP GNRLR
Sbjct: 165 MMELINNIAKQHSGLSVFAGVGERTREGNDFYHEMDESKVLDKVSMVFGQMNEPPGNRLR 224
Query: 759 VALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKL 818
VALTGL+IAE+FR+ G+D+L FIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKL
Sbjct: 225 VALTGLTIAEKFRDEGRDILFFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKL 284
Query: 819 QERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLE 878
QERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+
Sbjct: 285 QERITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLD 344
Query: 879 SYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S S+QLDP IVG+EHY VA +V+ LQ+YKEL+D
Sbjct: 345 STSRQLDPQIVGDEHYSVARKVQQTLQRYKELRD 378
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 151/361 (41%), Gaps = 25/361 (6%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L++G + T K +PVG LGRI+N G ID L + + + + AP D S
Sbjct: 68 LSRGMRFNRTHKPISVPVGDGTLGRIMNVLGNPIDQAGPILHEEKRPIHRDAPLFEDLSS 127
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G+
Sbjct: 128 SIELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVGE 187
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++ +D +V + + TG TI E FRD G+D L
Sbjct: 188 RTREGNDFYHEMDESKVLDKVSMVFGQMNEPPGNRLRVALTGLTIAEKFRDEGRDILFFI 247
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + L E K+ +++I + G
Sbjct: 248 DNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGKL------QERITSTKTG 294
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P D + L ++ PA++ S SR +
Sbjct: 295 SITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQI 354
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKP 528
G Y + +K ++ L +Y+EL +L + K + K+ + Q
Sbjct: 355 VGDEHYSVARK----VQQTLQRYKELRDIIAILGMDELSVEDKIIVSRARKVQRFLSQPF 410
Query: 529 H 529
H
Sbjct: 411 H 411
>gi|261856901|ref|YP_003264184.1| ATP synthase F1 subunit alpha [Halothiobacillus neapolitanus c2]
gi|261837370|gb|ACX97137.1| ATP synthase F1, alpha subunit [Halothiobacillus neapolitanus c2]
Length = 512
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/402 (59%), Positives = 309/402 (76%), Gaps = 2/402 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+++ +L +G + CT++I E+PVG ELLGR+VN+ G+ ID K K +EKI
Sbjct: 72 AIVLGGYDHLREGDQVKCTQRILEVPVGKELLGRVVNTLGQPIDGKGDINAKITAPIEKI 131
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG+++R+SV++PLLTGIK++D+M+PIG+GQRELIIGDRQTGKT +AIDTIINQK K V
Sbjct: 132 APGVIERQSVDQPLLTGIKALDAMVPIGRGQRELIIGDRQTGKTAVAIDTIINQKGKGVF 191
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK SS+ NV+ KL+ Y ++YT+VVAATA+D AA QY++ Y GCT+GEYFRD
Sbjct: 192 CVYVAIGQKASSIANVVRKLEEYGALEYTIVVAATASDPAAMQYLAAYAGCTMGEYFRDR 251
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++ +
Sbjct: 252 GMDSLIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNADYVAEF 311
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPAIN G+
Sbjct: 312 TKGEVTGQTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAINPGI 371
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K +KKL+G IR LAQYREL +FS+F+SDLD VT+ QL G++++ LMK
Sbjct: 372 SVSRVGGAAQTKAIKKLAGGIRTDLAQYRELAAFSQFASDLDEVTRKQLERGKRVTELMK 431
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKY 567
QK + S+ E+ + L + I +++I FE + Y
Sbjct: 432 QKQFKPLSVTEMALSLTAANEGYLDDIAVEKINDFETALHDY 473
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 156/338 (46%), Gaps = 23/338 (6%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V I G + ++ V T + + PVG LGR++N LG PID KG+IN+K +PI
Sbjct: 70 VGAIVLGGYDHLREGDQVKCTQRILEVPVGKELLGRVVNTLGQPIDGKGDINAKITAPIE 129
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L TGIK +D + P +G + + G GKT ++ I I
Sbjct: 130 KIAPGVIERQSVDQPLLTGIKALDAMVPIGRGQRELIIGDRQTGKTAVAIDTI----INQ 185
Query: 711 KGCSVF---IGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG VF + +G+++ + +++E L+ ++ ++P+ + A G ++
Sbjct: 186 KGKGVFCVYVAIGQKASSIANVVRKLEEYGALEYTIVVAATASDPAAMQYLAAYAGCTMG 245
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERIS---- 823
E FR+ G D L+ D++ + A ++S +L R P Y + +L ER S
Sbjct: 246 EYFRDRGMDSLIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNA 305
Query: 824 -----------STKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
+ + G++T++ I D++ P+ + D I L + GI P
Sbjct: 306 DYVAEFTKGEVTGQTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETDLFNSGIRP 365
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
AI+P S S+ + + K+A ++ L +Y+EL
Sbjct: 366 AINPGISVSR-VGGAAQTKAIKKLAGGIRTDLAQYREL 402
>gi|258544335|ref|ZP_05704569.1| ATP synthase F1 sector subunit beta [Cardiobacterium hominis ATCC
15826]
gi|258520415|gb|EEV89274.1| ATP synthase F1 sector subunit beta [Cardiobacterium hominis ATCC
15826]
Length = 459
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/335 (70%), Positives = 283/335 (84%)
Query: 578 SINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDN 637
++ +VQQQ+G+ +VRTI G++ G+ R V +TG+PI PVG TLGRI+NVLG ID+
Sbjct: 37 TVFEVQQQLGDGVVRTITMGSSEGLVRGMEVKNTGEPITVPVGKATLGRIMNVLGKEIDH 96
Query: 638 KGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTV 697
+I ++ IH P + + +LETGIKVIDLLCPF KGGK+GLFGGAGVGKTV
Sbjct: 97 GPKIEAEAYWGIHRKAPAYDELANSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTV 156
Query: 698 NMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRL 757
NMMELIRNIAIEH G SVF GVGER+REGNDFY+EMKESNVLDKVSL+YGQMNEP+GNR
Sbjct: 157 NMMELIRNIAIEHSGYSVFAGVGERTREGNDFYYEMKESNVLDKVSLVYGQMNEPAGNRF 216
Query: 758 RVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGK 817
RVALTGL++AE FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGK
Sbjct: 217 RVALTGLTMAEYFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGK 276
Query: 818 LQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPL 877
LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELGIYPA+DPL
Sbjct: 277 LQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPL 336
Query: 878 ESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+S S+QLDP ++G+EHY+ A V+ LQ+YKEL+D
Sbjct: 337 DSTSRQLDPLVIGDEHYETARRVQGVLQRYKELRD 371
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 154/360 (42%), Gaps = 25/360 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + T + +PVG LGRI+N G+ ID+ K + + + AP +
Sbjct: 59 EGLVRGMEVKNTGEPITVPVGKATLGRIMNVLGKEIDHGPKIEAEAYWGIHRKAPAYDEL 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +
Sbjct: 119 ANSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + ++K N +D +V + A ++ TG T+ EYFRD G+D L
Sbjct: 179 GERTREGNDFYYEMKESNVLDKVSLVYGQMNEPAGNRFRVALTGLTMAEYFRDEGRDVLF 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + L E K+ +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGKL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 286 TGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQ 526
V G Y+ +++ G +L +Y+EL +L K +Y KI + Q
Sbjct: 346 LVIGDEHYETARRVQG----VLQRYKELRDIIAILGMDELSEEDKQVVYRARKIQRFLSQ 401
>gi|410665023|ref|YP_006917394.1| F0F1 ATP synthase subunit beta [Simiduia agarivorans SA1 = DSM
21679]
gi|409027380|gb|AFU99664.1| F0F1 ATP synthase subunit beta [Simiduia agarivorans SA1 = DSM
21679]
Length = 460
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 278/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VR IA G++ G+ R V +T P+ PVG TLGRI++VLG+PID GE
Sbjct: 40 EVQQQLGDGVVRAIAMGSSEGLSRGLSVDNTKAPVSVPVGVETLGRIMDVLGNPIDEAGE 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I K + PIH P + + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEKARMPIHRKAPAYDELSASADLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFYHEMKESNVLDKV+++YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKESNVLDKVAMVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ GKDVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 220 LTGLTMAEKFRDEGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLDST+VLSR IA GIYPAIDPL+S
Sbjct: 280 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAIDPLDSS 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP I+G EHY+VA V+ LQ+YKELKD
Sbjct: 340 SRQLDPLIIGTEHYEVARGVQTVLQRYKELKD 371
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 161/370 (43%), Gaps = 25/370 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + + L++G T+ +PVG E LGRI++ G ID + K R + +
Sbjct: 52 AIAMGSSEGLSRGLSVDNTKAPVSVPVGVETLGRIMDVLGNPIDEAGEIGEKARMPIHRK 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP + + + L TGIK ID + P KG + + G GKT ++ I N K +
Sbjct: 112 APAYDELSASADLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSG 171
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
+ ++ +G++ + +++K N +D +V + + TG T+ E FRD
Sbjct: 172 LSVFAGVGERTREGNDFYHEMKESNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRD 231
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L+ D++ ++ A ++S LL R P V Y L E + +
Sbjct: 232 EGKDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------Q 278
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L ++ PAI+ S
Sbjct: 279 ERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAIDPLDS 338
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEK 519
SR + G Y++ + ++ +L +Y+EL+ +L K +Y K
Sbjct: 339 SSRQLDPLIIGTEHYEVARG----VQTVLQRYKELKDIIAILGMDELSEEDKQTVYRARK 394
Query: 520 ISLLMKQKPH 529
I + Q H
Sbjct: 395 IERFLSQPFH 404
>gi|262374657|ref|ZP_06067930.1| ATP synthase F1, beta subunit [Acinetobacter junii SH205]
gi|262310447|gb|EEY91538.1| ATP synthase F1, beta subunit [Acinetobacter junii SH205]
Length = 464
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/360 (66%), Positives = 291/360 (80%), Gaps = 7/360 (1%)
Query: 560 FEINII-KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTP 618
FE N + K + + + + +VQQQ+G+ +VRTIA G+T G+KR V T PI P
Sbjct: 18 FERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNVTSTNAPISVP 77
Query: 619 VGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCP 678
VG TLGRI++VLG PID G + ++++ PIH P ++ Q + ++LETGIKVIDLLCP
Sbjct: 78 VGPATLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLETGIKVIDLLCP 137
Query: 679 FLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV 738
F KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+SNV
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNV 197
Query: 739 LDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGT 792
LDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGT
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAGT 257
Query: 793 EVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTF 852
EVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+TTF
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTF 317
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA GIYPAIDPL+S S+QLDP +VG+EHY++A V+ LQ+YKELKD
Sbjct: 318 AHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKELKD 377
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 181/420 (43%), Gaps = 39/420 (9%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+ + ++++F N+V + Q++GT E Q G V + + + L +G
Sbjct: 8 QIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNV 67
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T +PVG LGRI++ G ID + R + + AP ++ + + L T
Sbjct: 68 TSTNAPISVPVGPATLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLET 127
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 128 GIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 187
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYD 356
+++K N +D +V + + TG T+ EYFRD G+D L+ D
Sbjct: 188 FYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVD 247
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P V Y L E + +++I + +G+
Sbjct: 248 NIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKSGS 294
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VG 471
+T+ + D+T P + D + L ++ +S PAI+ S SR V
Sbjct: 295 ITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVV 354
Query: 472 GAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQL--YNGEKISLLMKQKPH 529
G Y+I + ++ +L +Y+EL+ ++ + +L Y KI Q H
Sbjct: 355 GQEHYEIARS----VQNVLQRYKELKDIIAILGMDELAEEDKLVVYRARKIQRFFSQPFH 410
>gi|271502665|ref|YP_003335691.1| ATP synthase F1 subunit beta [Dickeya dadantii Ech586]
gi|270346220|gb|ACZ78985.1| ATP synthase F1, beta subunit [Dickeya dadantii Ech586]
Length = 460
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G++R V PI PVG TLGRI+NVLG+P+D KG
Sbjct: 42 EVQQQLGGGLVRCIAMGSSDGLRRGLKVTSLAHPIEVPVGKATLGRIMNVLGEPVDMKGP 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPTYEDLSNSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP G+RLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGSRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+ LSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP IVG+EHY VA V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLIVGQEHYDVARGVQSILQRYQELKD 373
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K E+PVG LGRI+N GE +D K + R + + AP D
Sbjct: 62 GLRRGLKVTSLAHPIEVPVGKATLGRIMNVLGEPVDMKGPIGEEERWAIHRAAPTYEDLS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGSRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + ++ +L +Y+EL+
Sbjct: 349 IVGQEHYDVARG----VQSILQRYQELK 372
>gi|344208950|ref|YP_004794091.1| ATP synthase subunit beta [Stenotrophomonas maltophilia JV3]
gi|386720049|ref|YP_006186375.1| ATP synthase subunit beta [Stenotrophomonas maltophilia D457]
gi|343780312|gb|AEM52865.1| ATP synthase subunit beta [Stenotrophomonas maltophilia JV3]
gi|384079611|emb|CCH14211.1| ATP synthase beta chain [Stenotrophomonas maltophilia D457]
Length = 468
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 238/362 (65%), Positives = 288/362 (79%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + ++N +VQQQ+G+ +VRTIA G+T+G+KRN + V+TG+ I
Sbjct: 16 VEFPRESVPKVYDALKVENTEITLEVQQQLGDGVVRTIALGSTDGLKRNLVAVNTGRGIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G + + IH P + +Q +LETGIKVIDL+
Sbjct: 76 VPVGAGTLGRIMDVLGRPIDEAGPVAASDNWEIHRAAPSYEDQSPATELLETGIKVIDLM 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
NVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLF+DNIYR+TLA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLA 255
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STKNG+ITS+QA+YVPADDLTDPSP+T
Sbjct: 256 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKNGSITSIQAVYVPADDLTDPSPAT 315
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLDST+ LSR IA LGIYPA+DPL+S S+Q+DP ++G EHY A V+ LQKYKEL
Sbjct: 316 TFAHLDSTVTLSRSIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375
Query: 911 KD 912
KD
Sbjct: 376 KD 377
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 29/324 (8%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T + +PVG LGRI++ G ID + + + AP D+ E L TGI
Sbjct: 70 TGRGISVPVGAGTLGRIMDVLGRPIDEAGPVAASDNWEIHRAAPSYEDQSPATELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 130 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDL 358
+++K N +D +V + + TG T+ EYFRD G+D L+ D++
Sbjct: 190 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNI 249
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P V Y L E + +++I + NG++T
Sbjct: 250 YRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKNGSIT 296
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L ++ + PA++ S SR V G
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDSTVTLSRSIASLGIYPAVDPLDSTSRQMDPLVIGH 356
Query: 474 AQYKIVKKLSGDIRIMLAQYRELE 497
Y ++ ++ L +Y+EL+
Sbjct: 357 EHYDTAQR----VQQTLQKYKELK 376
>gi|50083469|ref|YP_044979.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. ADP1]
gi|299771942|ref|YP_003733968.1| F0F1 ATP synthase subunit beta [Acinetobacter oleivorans DR1]
gi|425744433|ref|ZP_18862490.1| ATP synthase F1, beta subunit [Acinetobacter baumannii WC-323]
gi|81393960|sp|Q6FFK0.1|ATPB_ACIAD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|49529445|emb|CAG67157.1| membrane-bound ATP synthase , F1 sector, beta-subunit
[Acinetobacter sp. ADP1]
gi|298702030|gb|ADI92595.1| F0F1 ATP synthase subunit beta [Acinetobacter oleivorans DR1]
gi|425490946|gb|EKU57237.1| ATP synthase F1, beta subunit [Acinetobacter baumannii WC-323]
Length = 464
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/360 (66%), Positives = 291/360 (80%), Gaps = 7/360 (1%)
Query: 560 FEINII-KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTP 618
FE N + K + + + + +VQQQ+G+ +VRTIA G+T G+KR V T PI P
Sbjct: 18 FERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNVTSTNAPISVP 77
Query: 619 VGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCP 678
VG TLGRI++VLG PID G + ++++ PIH P ++ Q + ++LETGIKVIDLLCP
Sbjct: 78 VGPATLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLETGIKVIDLLCP 137
Query: 679 FLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV 738
F KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+SNV
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNV 197
Query: 739 LDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGT 792
LDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGT
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVDNIYRYTLAGT 257
Query: 793 EVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTF 852
EVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+TTF
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTF 317
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA GIYPAIDPL+S S+QLDP +VG+EHY++A V+ LQ+YKELKD
Sbjct: 318 AHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKELKD 377
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 181/420 (43%), Gaps = 39/420 (9%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+ + ++++F N+V + Q++GT E Q G V + + + L +G
Sbjct: 8 QIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNV 67
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T +PVG LGRI++ G ID + R + + AP ++ + + L T
Sbjct: 68 TSTNAPISVPVGPATLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLET 127
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 128 GIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 187
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL------GQDCLIIYD 356
+++K N +D +V + + TG T+ EYFRD G+D L+ D
Sbjct: 188 FYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVD 247
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P V Y L E + +++I + +G+
Sbjct: 248 NIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKSGS 294
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VG 471
+T+ + D+T P + D + L ++ +S PAI+ S SR V
Sbjct: 295 ITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVV 354
Query: 472 GAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQL--YNGEKISLLMKQKPH 529
G Y+I + ++ +L +Y+EL+ ++ + +L Y KI Q H
Sbjct: 355 GQEHYEIARS----VQNVLQRYKELKDIIAILGMDELAEEDKLVVYRARKIQRFFSQPFH 410
>gi|94676869|ref|YP_588610.1| F0F1 ATP synthase subunit beta [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|118573508|sp|Q1LTV4.1|ATPB_BAUCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|94220019|gb|ABF14178.1| ATP synthase F1, beta subunit [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 457
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 242/345 (70%), Positives = 285/345 (82%), Gaps = 1/345 (0%)
Query: 568 FRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRI 627
+ N KN + I +V+QQ+G IVR IA G + G++R V+D G I PVG TL RI
Sbjct: 30 LEVTNGKNKL-ILEVEQQLGSGIVRCIAMGVSEGLRRGLTVIDLGHAIKVPVGKSTLSRI 88
Query: 628 LNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGL 687
+NVLG+PID KG IN+++ IH P++ + ILETGIKVIDL+CP +KGGK GL
Sbjct: 89 MNVLGEPIDMKGIINAEEHWSIHRSAPRYEELALSQEILETGIKVIDLMCPLVKGGKAGL 148
Query: 688 FGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYG 747
FGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+SNVLDKVSL+YG
Sbjct: 149 FGGAGVGKTVNMMELIRNIAIEHAGYSVFTGVGERTREGNDFYHEMKDSNVLDKVSLVYG 208
Query: 748 QMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY 807
QMNEP GNR RVALTGL+IAE+FR+ G DVLLFIDNIYR+TLAG EVSA+LGR PSAVGY
Sbjct: 209 QMNEPPGNRFRVALTGLTIAEKFRDEGHDVLLFIDNIYRYTLAGAEVSALLGRMPSAVGY 268
Query: 808 QPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAE 867
QPTL+EEMG LQERI+STK G+ITS+QA+YVPADDLTDP+P+TTF+HLD+TIVLSRQIA
Sbjct: 269 QPTLSEEMGLLQERITSTKYGSITSIQAVYVPADDLTDPAPATTFSHLDATIVLSRQIAS 328
Query: 868 LGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LGIYPAIDPLES S+QLDP +VG++HY VA V+ LQ+Y+ELKD
Sbjct: 329 LGIYPAIDPLESTSRQLDPLVVGQKHYDVALGVQGILQRYQELKD 373
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 142/329 (43%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G ++PVG L RI+N GE ID K + ++ + AP +
Sbjct: 61 EGLRRGLTVIDLGHAIKVPVGKSTLSRIMNVLGEPIDMKGIINAEEHWSIHRSAPRYEEL 120
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
E L TGIK ID M P+ KG + + G GKT ++ I N ++ ++ +
Sbjct: 121 ALSQEILETGIKVIDLMCPLVKGGKAGLFGGAGVGKTVNMMELIRNIAIEHAGYSVFTGV 180
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + ++ TG TI E FRD G D L+
Sbjct: 181 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRFRVALTGLTIAEKFRDEGHDVLL 240
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + + + + L +++I +
Sbjct: 241 FIDNIYRYTLAGAEVSALLGRMPSAVGY-------------QPTLSEEMGLLQERITSTK 287
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P S D I L + + PAI+ S SR
Sbjct: 288 YGSITSIQAVYVPADDLTDPAPATTFSHLDATIVLSRQIASLGIYPAIDPLESTSRQLDP 347
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + G +L +Y+EL+
Sbjct: 348 LVVGQKHYDVALGVQG----ILQRYQELK 372
>gi|333375754|ref|ZP_08467555.1| ATP synthase F1 sector beta subunit [Kingella kingae ATCC 23330]
gi|381400236|ref|ZP_09925213.1| F0F1 ATP synthase subunit beta [Kingella kingae PYKK081]
gi|332969727|gb|EGK08741.1| ATP synthase F1 sector beta subunit [Kingella kingae ATCC 23330]
gi|380834718|gb|EIC14546.1| F0F1 ATP synthase subunit beta [Kingella kingae PYKK081]
Length = 465
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 236/338 (69%), Positives = 279/338 (82%), Gaps = 6/338 (1%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T+G+KR V +TG PI PVG TLGRI++VLG+P+D G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTDGLKRGLAVNNTGAPITVPVGKATLGRIMDVLGNPVDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S + IH PKF +LETGIKVIDLLCPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGSDQTRAIHQPAPKFDELSSATELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFYHEMK+SNVLDKV+++YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
LTGLS+AE FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 220 LTGLSMAEHFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 279
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG+LQERI+ST+ G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+
Sbjct: 280 MGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAV 339
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP ++G+EHY VA V+ LQKYKEL+D
Sbjct: 340 DPLDSTSRQLDPMVLGQEHYDVARGVQATLQKYKELRD 377
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 151/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G +D + + AP +
Sbjct: 60 GLKRGLAVNNTGAPITVPVGKATLGRIMDVLGNPVDEAGPIGSDQTRAIHQPAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 SATELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG ++ E+FRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLSMAEHFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQATLQKYKELRDI------IAILGMDELSDEDKLTVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|325266848|ref|ZP_08133519.1| ATP synthase F1 sector beta subunit [Kingella denitrificans ATCC
33394]
gi|324981589|gb|EGC17230.1| ATP synthase F1 sector beta subunit [Kingella denitrificans ATCC
33394]
Length = 465
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 236/338 (69%), Positives = 279/338 (82%), Gaps = 6/338 (1%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T+G+KR V +TG PI PVG TLGRI++VLG+P+D G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTDGLKRGLAVNNTGAPITVPVGKATLGRIMDVLGNPVDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S + IH PKF +LETGIKVIDLLCPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGSDQTRAIHQPAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFYHEMK+SNVLDKV+++YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
LTGLS+AE FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 220 LTGLSMAEHFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 279
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG+LQERI+ST+ G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+
Sbjct: 280 MGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAV 339
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP ++G+EHY VA V+ LQKYKEL+D
Sbjct: 340 DPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRD 377
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 151/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G +D + + AP +
Sbjct: 60 GLKRGLAVNNTGAPITVPVGKATLGRIMDVLGNPVDEAGPIGSDQTRAIHQPAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 STTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG ++ E+FRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLSMAEHFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVI 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|453064422|gb|EMF05387.1| F0F1 ATP synthase subunit beta [Serratia marcescens VGH107]
Length = 460
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 238/361 (65%), Positives = 291/361 (80%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + + K + + ++N + +VQQQ+G +VR IA G ++G++R V +
Sbjct: 13 VVDVEFPQDAVPKVYDALEVENGTEKLVLEVQQQLGGGVVRCIAMGTSDGLRRGLKVNNL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
PI PVG TLGRI+NVLG PID KG+I +++ IH P + + +LETGIK
Sbjct: 73 DHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELSSSQELLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
V+DL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM +SNVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAG
Sbjct: 193 EMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K + E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 62 GLRRGLKVNNLDHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 SSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|358013164|ref|ZP_09144974.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. P8-3-8]
Length = 464
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/360 (66%), Positives = 292/360 (81%), Gaps = 7/360 (1%)
Query: 560 FEINII-KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTP 618
FE N + K + + + + +VQQQ+G+ +VRTIA G+T G+KR V +TG PI P
Sbjct: 18 FERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNVTNTGAPISVP 77
Query: 619 VGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCP 678
VG LGRI++VLG PID G + ++++ PIH P +++Q + ++LETGIKVIDLLCP
Sbjct: 78 VGTACLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYADQAASTDLLETGIKVIDLLCP 137
Query: 679 FLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV 738
F KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+SNV
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNV 197
Query: 739 LDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGT 792
LDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGT
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAGT 257
Query: 793 EVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTF 852
EVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+TTF
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTF 317
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA GIYPAIDPL+S S+QLDP +VG EHY++A V+ LQ+YKELKD
Sbjct: 318 AHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGTEHYEIARSVQNVLQRYKELKD 377
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 181/420 (43%), Gaps = 39/420 (9%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+ + ++++F N+V + Q++GT E Q G V + + + L +G
Sbjct: 8 QIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNV 67
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T +PVG LGRI++ G ID + R + + AP D+ + + L T
Sbjct: 68 TNTGAPISVPVGTACLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYADQAASTDLLET 127
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 128 GIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 187
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYD 356
+++K N +D +V + + TG T+ EYFRD G+D L+ D
Sbjct: 188 FYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVD 247
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P V Y L E + +++I + +G+
Sbjct: 248 NIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKSGS 294
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VG 471
+T+ + D+T P + D + L ++ +S PAI+ S SR V
Sbjct: 295 ITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVV 354
Query: 472 GAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQL--YNGEKISLLMKQKPH 529
G Y+I + ++ +L +Y+EL+ ++ + +L Y KI Q H
Sbjct: 355 GTEHYEIARS----VQNVLQRYKELKDIIAILGMDELAEEDKLIVYRARKIQRFFSQPFH 410
>gi|33594186|ref|NP_881830.1| ATP synthase F0F1 subunit beta [Bordetella pertussis Tohama I]
gi|384205486|ref|YP_005591225.1| F0F1 ATP synthase subunit beta [Bordetella pertussis CS]
gi|408414414|ref|YP_006625121.1| ATP synthase subunit beta [Bordetella pertussis 18323]
gi|81836194|sp|Q7VU44.1|ATPB_BORPE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|33564261|emb|CAE43553.1| ATP synthase beta chain [Bordetella pertussis Tohama I]
gi|332383600|gb|AEE68447.1| F0F1 ATP synthase subunit beta [Bordetella pertussis CS]
gi|401776584|emb|CCJ61788.1| ATP synthase beta chain [Bordetella pertussis 18323]
Length = 466
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG PI PVG TLGRI++VLG PID G
Sbjct: 47 EVQQQLGDGVVRTIALGSSDGLRRGMQVAGTGAPISVPVGHGTLGRIMDVLGRPIDEAGP 106
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S +K IH P+F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 107 IASDEKRAIHQPAPRFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 166
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEM+ESNVLDKV++++GQMNEP GNRLRVA
Sbjct: 167 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVA 226
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 227 LTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 286
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 287 RITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSS 346
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY+VA V+ LQ+YKEL+D
Sbjct: 347 SRQLDPQVVGEEHYQVARGVQQTLQRYKELRD 378
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 138/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG LGRI++ G ID + + + AP +
Sbjct: 67 GLRRGMQVAGTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIASDEKRAIHQPAPRFDELS 126
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 127 PSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 186
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 187 ERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFF 246
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 247 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 293
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 294 GSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSSSRQLDPQ 353
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y++ + ++ L +Y+EL
Sbjct: 354 VVGEEHYQVARG----VQQTLQRYKEL 376
>gi|407007653|gb|EKE23255.1| hypothetical protein ACD_6C00551G0002 [uncultured bacterium]
Length = 464
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/360 (66%), Positives = 291/360 (80%), Gaps = 7/360 (1%)
Query: 560 FEINII-KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTP 618
FE N + K + + + + +VQQQ+G+ +VRTIA G+T G+KR V +T PI P
Sbjct: 18 FERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNVTNTNAPISVP 77
Query: 619 VGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCP 678
VG TLGRI++VLG PID G + ++ + PIH P ++ Q + ++LETGIKVIDLLCP
Sbjct: 78 VGTATLGRIMDVLGRPIDEAGPVATEARLPIHRQAPSYAEQAASTDLLETGIKVIDLLCP 137
Query: 679 FLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV 738
F KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+SNV
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNV 197
Query: 739 LDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGT 792
LDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGT
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAGT 257
Query: 793 EVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTF 852
EVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+TTF
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTF 317
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA GIYPAIDPL+S S+QLDP +VG+EHY++A V+ LQ+YKELKD
Sbjct: 318 AHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKELKD 377
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 181/420 (43%), Gaps = 39/420 (9%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+ + ++++F N+V + Q++GT E Q G V + + + L +G
Sbjct: 8 QIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNV 67
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T +PVG LGRI++ G ID + R + + AP ++ + + L T
Sbjct: 68 TNTNAPISVPVGTATLGRIMDVLGRPIDEAGPVATEARLPIHRQAPSYAEQAASTDLLET 127
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 128 GIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 187
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYD 356
+++K N +D +V + + TG T+ EYFRD G+D L+ D
Sbjct: 188 FYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVD 247
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P V Y L E + +++I + +G+
Sbjct: 248 NIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKSGS 294
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VG 471
+T+ + D+T P + D + L ++ +S PAI+ S SR V
Sbjct: 295 ITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVV 354
Query: 472 GAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQL--YNGEKISLLMKQKPH 529
G Y+I + ++ +L +Y+EL+ ++ + +L Y KI Q H
Sbjct: 355 GQEHYEIARS----VQNVLQRYKELKDIIAILGMDELAEEDKLVVYRARKIQRFFSQPFH 410
>gi|238023073|ref|ZP_04603499.1| hypothetical protein GCWU000324_02997 [Kingella oralis ATCC 51147]
gi|237865456|gb|EEP66596.1| hypothetical protein GCWU000324_02997 [Kingella oralis ATCC 51147]
Length = 465
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 236/338 (69%), Positives = 278/338 (82%), Gaps = 6/338 (1%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G T+G+KR V +TG PI PVG TLGRI++VLG P+D G
Sbjct: 40 EVQQQLGDGIVRTIAMGATDGLKRGYAVENTGAPITVPVGTATLGRIVDVLGKPVDEAGA 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I++ IH + PKF +LETGIKVIDLLCPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IDASHTRAIHQIAPKFDELSSATELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFYHEMKESNVLDKV+++YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKESNVLDKVAMVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
LTGL++AE FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 220 LTGLTMAEYFRDEKDETGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 279
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG+LQERI+ST+ G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+
Sbjct: 280 MGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAV 339
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP ++G+EHY VA V+ LQKYKEL+D
Sbjct: 340 DPLDSTSRQLDPMVLGQEHYDVARGVQATLQKYKELRD 377
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 140/333 (42%), Gaps = 29/333 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRIV+ G+ +D + + +IAP +
Sbjct: 60 GLKRGYAVENTGAPITVPVGTATLGRIVDVLGKPVDEAGAIDASHTRAIHQIAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 SATELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKESNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDETGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
R V G Y + + ++ L +Y+EL
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQATLQKYKEL 375
>gi|339327668|ref|YP_004687361.1| ATP synthase subunit beta [Cupriavidus necator N-1]
gi|338167825|gb|AEI78880.1| ATP synthase subunit beta [Cupriavidus necator N-1]
Length = 467
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 232/332 (69%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG PI PVG TLGRI++VLG PID G
Sbjct: 48 EVQQQLGDGVVRTIALGSSDGLRRGMPVKSTGAPISVPVGQGTLGRIMDVLGRPIDEAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S ++ IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IASDERRAIHQKAPKFDELSPSTDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
L+GL++AE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LSGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTLVLSRDIAALGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP +VG+EHY VA V+ LQ+YKEL+D
Sbjct: 348 SRQMDPQVVGQEHYNVARAVQQTLQRYKELRD 379
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 137/327 (41%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID R + + AP +
Sbjct: 68 GLRRGMPVKSTGAPISVPVGQGTLGRIMDVLGRPIDEAGPIASDERRAIHQKAPKFDELS 127
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 128 PSTDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 187
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + +G T+ E FRD G+D L
Sbjct: 188 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALSGLTMAEKFRDEGRDILFF 247
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 248 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 294
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 295 GSITSIQAVYVPADDLTDPSPATTFLHLDSTLVLSRDIAALGIYPAVDPLDSTSRQMDPQ 354
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + + ++ L +Y+EL
Sbjct: 355 VVGQEHYNVARA----VQQTLQRYKEL 377
>gi|149925408|ref|ZP_01913672.1| F0F1 ATP synthase subunit beta [Limnobacter sp. MED105]
gi|149825525|gb|EDM84733.1| F0F1 ATP synthase subunit beta [Limnobacter sp. MED105]
Length = 463
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 238/356 (66%), Positives = 288/356 (80%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E N+ K + + ++ + +VQQQ+G+ +VRTI G ++G++R V +TGKPI
Sbjct: 20 VEFSRNNMPKVYDALTMEGSELTLEVQQQLGDGVVRTICLGASDGLRRGMAVHNTGKPIS 79
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G + + IH P F + +LETGIKVIDL+
Sbjct: 80 VPVGQGTLGRIMDVLGRPIDEAGPVTTDATRAIHQNAPAFDELSPSTELLETGIKVIDLI 139
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA +H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 140 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHGGYSVFAGVGERTREGNDFYHEMKDS 199
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYRFTLAGTEVSA
Sbjct: 200 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLLFVDNIYRFTLAGTEVSA 259
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 260 LLGRMPSAVGYQPTLAEEMGRLQERITSTKKGSITSVQAVYVPADDLTDPSPATTFAHLD 319
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+Q+DP I+GEEHY VA V+ LQ+YKEL+D
Sbjct: 320 ATVVLSRDIASLGIYPAVDPLDSTSRQVDPNIIGEEHYNVARGVQQTLQRYKELRD 375
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 135/326 (41%), Gaps = 23/326 (7%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G T K +PVG LGRI++ G ID + + AP +
Sbjct: 65 LRRGMAVHNTGKPISVPVGQGTLGRIMDVLGRPIDEAGPVTTDATRAIHQNAPAFDELSP 124
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G+
Sbjct: 125 STELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHGGYSVFAGVGE 184
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++K N +D +V + + TG T+ EYFRD G+D L+
Sbjct: 185 RTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLLFV 244
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ + A ++S LL R P + + RL ER I + G
Sbjct: 245 DNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKKG 291
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L ++ + PA++ S SR +
Sbjct: 292 SITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQVDPNI 351
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYREL 496
G Y + + ++ L +Y+EL
Sbjct: 352 IGEEHYNVARG----VQQTLQRYKEL 373
>gi|30248228|ref|NP_840298.1| F0F1 ATP synthase subunit alpha [Nitrosomonas europaea ATCC 19718]
gi|81722254|sp|Q82XQ0.1|ATPA_NITEU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|30180113|emb|CAD84115.1| FoF1-type ATP synthase alpha subunit [Nitrosomonas europaea ATCC
19718]
Length = 513
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 237/405 (58%), Positives = 309/405 (76%), Gaps = 4/405 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ ++L +G CT +I E+PVG LLGR+VN+ G+ ID K + E +EKI
Sbjct: 73 AVILGAYEHLKEGDIVKCTSRILEVPVGEALLGRVVNALGQPIDGKGPIAAEGTEPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KSIDSM+P+G+GQRELIIGDRQTGKT +AID IINQK ++VI
Sbjct: 133 APGVVWRKSVDQPVQTGLKSIDSMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGEDVI 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ NV+ KL+ M YT+VV A+A++SAA QYI+PY+GCT+GEYFRD
Sbjct: 193 CIYVAIGQKASSIANVVRKLEEVGAMAYTIVVVASASESAAMQYIAPYSGCTMGEYFRDK 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
GQD LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 253 GQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEKA 312
Query: 408 ---KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVG 464
K+ K G+LTA PIIET GDVT+F+PTNVISITDGQIFL+++LFN+ RPAIN G
Sbjct: 313 TGGKVKGK-TGSLTALPIIETQAGDVTAFVPTNVISITDGQIFLESDLFNAGIRPAINAG 371
Query: 465 LSVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLM 524
+SVSRVGGAAQ K++KKL G IR+ LAQYREL +F++F+SDLD T+ QL G+ + LM
Sbjct: 372 ISVSRVGGAAQTKVIKKLGGGIRLALAQYRELAAFAQFASDLDEATRKQLERGKMATELM 431
Query: 525 KQKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
KQ + + E+ + L + +F + IK+ FE + + R
Sbjct: 432 KQSQYATLKVSEMALTLFALNKGYFDDVDIKRALAFESALKSHIR 476
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 153/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G +K IV T + + PVG+ LGR++N LG PID KG I ++ PI
Sbjct: 71 VGAVILGAYEHLKEGDIVKCTSRILEVPVGEALLGRVVNALGQPIDGKGPIAAEGTEPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GKT ++ I N E
Sbjct: 131 KIAPGVVWRKSVDQPVQTGLKSIDSMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGED 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ + +++E + ++ +E + + +G ++ E F
Sbjct: 191 VIC-IYVAIGQKASSIANVVRKLEEVGAMAYTIVVVASASESAAMQYIAPYSGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 250 RDKGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D+T P+ + D I L + GI PAI+
Sbjct: 310 EKATGGKVKGKTGSLTALPIIETQAGDVTAFVPTNVISITDGQIFLESDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G KV + ++ L +Y+EL
Sbjct: 370 AGISVSR-----VGGAAQTKVIKKLGGGIRLALAQYREL 403
>gi|430809336|ref|ZP_19436451.1| F0F1 ATP synthase subunit beta [Cupriavidus sp. HMR-1]
gi|429498219|gb|EKZ96732.1| F0F1 ATP synthase subunit beta [Cupriavidus sp. HMR-1]
Length = 467
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG PI PVG TLGRI++VLG PID G
Sbjct: 48 EVQQQLGDGVVRTIALGSSDGLRRGMSVKGTGAPISVPVGHGTLGRIMDVLGRPIDEAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + +K IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IEADEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG EHY+VA V+ LQ+YKEL+D
Sbjct: 348 SRQLDPQVVGTEHYEVARRVQQTLQRYKELRD 379
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 139/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID + + + AP +
Sbjct: 68 GLRRGMSVKGTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIEADEKRAIHQKAPKFDELS 127
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 128 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 187
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 188 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 247
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 248 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 294
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 295 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQ 354
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y++ ++ ++ L +Y+EL
Sbjct: 355 VVGTEHYEVARR----VQQTLQRYKEL 377
>gi|262281306|ref|ZP_06059087.1| membrane-bound ATP synthase [Acinetobacter calcoaceticus RUH2202]
gi|262257132|gb|EEY75869.1| membrane-bound ATP synthase [Acinetobacter calcoaceticus RUH2202]
Length = 464
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/360 (66%), Positives = 291/360 (80%), Gaps = 7/360 (1%)
Query: 560 FEINII-KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTP 618
FE N + K + + + + +VQQQ+G+ +VRTIA G+T G+KR V T PI P
Sbjct: 18 FERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNVTSTNAPISVP 77
Query: 619 VGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCP 678
VG TLGRI++VLG PID G + ++++ PIH P ++ Q + ++LETGIKVIDLLCP
Sbjct: 78 VGPATLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLETGIKVIDLLCP 137
Query: 679 FLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV 738
F KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+SNV
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNV 197
Query: 739 LDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGT 792
LDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGT
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVDNIYRYTLAGT 257
Query: 793 EVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTF 852
EVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+TTF
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTF 317
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA GIYPAIDPL+S S+QLDP +VG+EHY++A V+ LQ+YKELKD
Sbjct: 318 AHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNILQRYKELKD 377
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 181/420 (43%), Gaps = 39/420 (9%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+ + ++++F N+V + Q++GT E Q G V + + + L +G
Sbjct: 8 QIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNV 67
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T +PVG LGRI++ G ID + R + + AP ++ + + L T
Sbjct: 68 TSTNAPISVPVGPATLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLET 127
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 128 GIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 187
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL------GQDCLIIYD 356
+++K N +D +V + + TG T+ EYFRD G+D L+ D
Sbjct: 188 FYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVD 247
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P V Y L E + +++I + +G+
Sbjct: 248 NIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKSGS 294
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VG 471
+T+ + D+T P + D + L ++ +S PAI+ S SR V
Sbjct: 295 ITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVV 354
Query: 472 GAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQL--YNGEKISLLMKQKPH 529
G Y+I + ++ +L +Y+EL+ ++ + +L Y KI Q H
Sbjct: 355 GQEHYEIARS----VQNILQRYKELKDIIAILGMDELAEEDKLVVYRARKIQRFFSQPFH 410
>gi|34499994|gb|AAQ73579.1| ATP synthase beta subunit [Gallibacterium anatis DSM 16844 = F 149]
Length = 444
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 241/356 (67%), Positives = 289/356 (81%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + +N++ + + +VQQQ+G +VR IA G+++G+KR V +TG PI
Sbjct: 16 VEFPQDAVPKVYEALNVETGLVL-EVQQQLGGGVVRCIAMGSSDGLKRGLSVTNTGSPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I K + IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTETLGRIMNVLGEPIDERGPIGEKARWSIHRAAPSYEEQANSTELLETGIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM+ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMQES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG QERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGGFQERITSTKTGSITSVQAVYVPADDLTDPSPATTFVHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIY L+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYLRWIRLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKD 370
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 140/329 (42%), Gaps = 25/329 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG E LGRI+N GE ID + K R ++ + AP ++
Sbjct: 59 GLKRGLSVTNTGSPISVPVGTETLGRIMNVLGEPIDERGPIGEKARWSIHRAAPSYEEQA 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMQESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGGF------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSN-YRPAINVGLSVSR---- 469
G++T+ + D+T P D + L + + Y I + S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFVHLDSTVVLSRQIASLGIYLRWIRLD-STSRQLDP 344
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 345 QVVGQEHYDVARGVQG----ILQRYKELK 369
>gi|424741178|ref|ZP_18169539.1| ATP synthase F1, beta subunit [Acinetobacter baumannii WC-141]
gi|422945111|gb|EKU40082.1| ATP synthase F1, beta subunit [Acinetobacter baumannii WC-141]
Length = 464
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/360 (66%), Positives = 291/360 (80%), Gaps = 7/360 (1%)
Query: 560 FEINII-KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTP 618
FE N + K + + + + +VQQQ+G+ +VRTIA G+T G+KR V T PI P
Sbjct: 18 FERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNVTSTNAPISVP 77
Query: 619 VGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCP 678
VG TLGRI++VLG PID G + ++++ PIH P ++ Q + ++LETGIKVIDLLCP
Sbjct: 78 VGPATLGRIMDVLGRPIDEAGPVATEERLPIHREAPSYAEQAASTDLLETGIKVIDLLCP 137
Query: 679 FLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV 738
F KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+SNV
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNV 197
Query: 739 LDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGT 792
LDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGT
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVDNIYRYTLAGT 257
Query: 793 EVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTF 852
EVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+TTF
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTF 317
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA GIYPAIDPL+S S+QLDP +VG+EHY++A V+ LQ+YKELKD
Sbjct: 318 AHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKELKD 377
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 181/420 (43%), Gaps = 39/420 (9%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+ + ++++F N+V + Q++GT E Q G V + + + L +G
Sbjct: 8 QIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNV 67
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T +PVG LGRI++ G ID + R + + AP ++ + + L T
Sbjct: 68 TSTNAPISVPVGPATLGRIMDVLGRPIDEAGPVATEERLPIHREAPSYAEQAASTDLLET 127
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 128 GIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 187
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL------GQDCLIIYD 356
+++K N +D +V + + TG T+ EYFRD G+D L+ D
Sbjct: 188 FYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVD 247
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P V Y L E + +++I + +G+
Sbjct: 248 NIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKSGS 294
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VG 471
+T+ + D+T P + D + L ++ +S PAI+ S SR V
Sbjct: 295 ITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVV 354
Query: 472 GAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQL--YNGEKISLLMKQKPH 529
G Y+I + ++ +L +Y+EL+ ++ + +L Y KI Q H
Sbjct: 355 GQEHYEIARS----VQNVLQRYKELKDIIAILGMDELAEEDKLVVYRARKIQRFFSQPFH 410
>gi|359427626|ref|ZP_09218674.1| ATP synthase subunit beta [Acinetobacter sp. NBRC 100985]
gi|406036457|ref|ZP_11043821.1| F0F1 ATP synthase subunit beta [Acinetobacter parvus DSM 16617 =
CIP 108168]
gi|358237043|dbj|GAB00213.1| ATP synthase subunit beta [Acinetobacter sp. NBRC 100985]
Length = 464
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/360 (66%), Positives = 290/360 (80%), Gaps = 7/360 (1%)
Query: 560 FEINII-KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTP 618
FE N + K + + + + +VQQQ+G+ +VRTIA G+T G+KR V T PI P
Sbjct: 18 FERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNVTSTNAPISVP 77
Query: 619 VGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCP 678
VG TLGRI++VLG PID G + ++ + PIH P ++ Q + ++LETGIKVIDLLCP
Sbjct: 78 VGPATLGRIMDVLGRPIDEAGPVATEARLPIHRQAPSYAEQAASTDLLETGIKVIDLLCP 137
Query: 679 FLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV 738
F KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+SNV
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNV 197
Query: 739 LDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGT 792
LDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGT
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAGT 257
Query: 793 EVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTF 852
EVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+TTF
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTF 317
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA GIYPAIDPL+S S+QLDP +VG+EHY++A V+ LQ+YKELKD
Sbjct: 318 AHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKELKD 377
Score = 102 bits (255), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 181/420 (43%), Gaps = 39/420 (9%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+ + ++++F N+V + Q++GT E Q G V + + + L +G
Sbjct: 8 QIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNV 67
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T +PVG LGRI++ G ID + R + + AP ++ + + L T
Sbjct: 68 TSTNAPISVPVGPATLGRIMDVLGRPIDEAGPVATEARLPIHRQAPSYAEQAASTDLLET 127
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 128 GIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 187
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYD 356
+++K N +D +V + + TG T+ EYFRD G+D L+ D
Sbjct: 188 FYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVD 247
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P V Y L E + +++I + +G+
Sbjct: 248 NIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKSGS 294
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VG 471
+T+ + D+T P + D + L ++ +S PAI+ S SR V
Sbjct: 295 ITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVV 354
Query: 472 GAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQL--YNGEKISLLMKQKPH 529
G Y+I + ++ +L +Y+EL+ ++ + +L Y KI Q H
Sbjct: 355 GQEHYEIARS----VQNVLQRYKELKDIIAILGMDELAEEDKLVVYRARKIQRFFSQPFH 410
>gi|34500028|gb|AAQ73596.1| ATP synthase beta subunit [Pasteurella caballi]
Length = 445
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/356 (67%), Positives = 289/356 (81%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + + + + +VQQQ+G +VR IA G ++G+KR V +TG PI
Sbjct: 16 VEFPQDAVPKVYDALKVTDAGLVLEVQQQLGGGVVRCIALGTSDGLKRGLSVTNTGNPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID KG+I +++ IH P + Q + +LETGIKVIDL+
Sbjct: 76 VPVGTKTLGRIMNVLGEPIDQKGDIGAEETWAIHRAAPSYEEQSNSTELLETGIKVIDLI 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G S + VGER+ EGNDFYHEM +S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSDSLXVGERTPEGNDFYHEMTDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 196 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 316 STVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKD 371
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 140/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG + LGRI+N GE ID K + + + AP ++
Sbjct: 60 GLKRGLSVTNTGNPISVPVGTKTLGRIMNVLGEPIDQKGDIGAEETWAIHRAAPSYEEQS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + + +G
Sbjct: 120 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSDSLXVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 180 ERTPEGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPQ 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 347 VVGQEHYDVARGVQG----ILQRYKELK 370
>gi|295678133|ref|YP_003606657.1| ATP synthase F1 subunit beta [Burkholderia sp. CCGE1002]
gi|295437976|gb|ADG17146.1| ATP synthase F1, beta subunit [Burkholderia sp. CCGE1002]
Length = 464
Score = 504 bits (1298), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R T+V +TG PI PVG TLGRI++VLG PID G
Sbjct: 45 EVQQQLGDGVVRTICLGASDGLRRGTVVKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGP 104
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+S+ IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 105 ISSETTRAIHQKAPAFDQLSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 164
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 165 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 224
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 225 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 284
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 285 RITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 344
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP+++GEEHY + V+ LQ+YKEL+D
Sbjct: 345 SRQIDPHVIGEEHYSITRGVQQTLQRYKELRD 376
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 130/311 (41%), Gaps = 23/311 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + + + AP E L TGIK ID +
Sbjct: 81 VPVGKPTLGRIMDVLGRPIDEAGPISSETTRAIHQKAPAFDQLSPSTELLETGIKVIDLI 140
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K ++ +G++ + +++K
Sbjct: 141 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 200
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
N +D +V + + TG T+ E+FRD G D L D++ + A ++S
Sbjct: 201 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSA 260
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P V Y L E K+ +++I + G++T+ + D+
Sbjct: 261 LLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKTGSITSVQAVYVPADDL 307
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P D + L ++ + PA++ S SR V G Y I +
Sbjct: 308 TDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPHVIGEEHYSITR----G 363
Query: 486 IRIMLAQYREL 496
++ L +Y+EL
Sbjct: 364 VQQTLQRYKEL 374
>gi|307133303|ref|YP_003885319.1| F1 sector of membrane-bound ATP synthase subunit beta [Dickeya
dadantii 3937]
gi|306530832|gb|ADN00763.1| F1 sector of membrane-bound ATP synthase, beta subunit [Dickeya
dadantii 3937]
Length = 460
Score = 504 bits (1298), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G++R V + PI PVG TLGRI+NVLG+P+D KG
Sbjct: 42 EVQQQLGGGLVRCIAMGSSDGLRRGLKVANLAHPIEVPVGKATLGRIMNVLGEPVDMKGP 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPTYEELSNSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP G+RLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGSRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+ LSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP IVG+EHY VA V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLIVGQEHYDVARGVQSILQRYQELKD 373
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K E+PVG LGRI+N GE +D K + R + + AP +
Sbjct: 62 GLRRGLKVANLAHPIEVPVGKATLGRIMNVLGEPVDMKGPIGEEERWAIHRAAPTYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGSRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + ++ +L +Y+EL+
Sbjct: 349 IVGQEHYDVARG----VQSILQRYQELK 372
>gi|18146851|dbj|BAB82484.1| F0F1-ATPase subunit beta [Colwellia maris]
Length = 461
Score = 504 bits (1297), Expect = e-139, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G+++G++R V +TG+ I PVG TLGRI+NVLG+PID G
Sbjct: 43 EVQQQLGGGVVRTIAMGSSDGLRRGLNVENTGQGIQVPVGVETLGRIMNVLGEPIDEAGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I K + IH P ++ Q +N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IGEKDRWSIHREAPAYAEQSMSNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 163 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
TGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 FTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGILQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+ST G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA GIYPAIDPL+S
Sbjct: 283 RITSTNKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAIDPLDSS 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG EHY+ A V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVVGAEHYETARGVQTVLQRYKELKD 374
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 159/363 (43%), Gaps = 33/363 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T + ++PVG E LGRI+N GE ID K+R ++ + AP ++
Sbjct: 63 GLRRGLNVENTGQGIQVPVGVETLGRIMNVLGEPIDEAGPIGEKDRWSIHREAPAYAEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
NE L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 123 MSNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + +TG T+ E FRD G+D L
Sbjct: 183 ERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVAFTGLTMAEKFRDEGRDVLFF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I + N
Sbjct: 243 VDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGILQERITSTNK 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PAI+ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAIDPLDSSSRQLDPL 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE------SFSKFSSDLDIVTKTQLYNGEKISLL 523
V GA Y+ + ++ +L +Y+EL+ + S D K ++ KI
Sbjct: 350 VVGAEHYETARG----VQTVLQRYKELKDIIAILGMDELSED----DKQTVFRARKIQRF 401
Query: 524 MKQ 526
+ Q
Sbjct: 402 LSQ 404
>gi|226952190|ref|ZP_03822654.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. ATCC 27244]
gi|294648871|ref|ZP_06726327.1| ATP synthase F1 beta subunit [Acinetobacter haemolyticus ATCC
19194]
gi|226837028|gb|EEH69411.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. ATCC 27244]
gi|292825262|gb|EFF84009.1| ATP synthase F1 beta subunit [Acinetobacter haemolyticus ATCC
19194]
Length = 464
Score = 504 bits (1297), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/360 (66%), Positives = 291/360 (80%), Gaps = 7/360 (1%)
Query: 560 FEINII-KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTP 618
FE N + K + + + + +VQQQ+G+ +VRTIA G+T G+KR V T PI P
Sbjct: 18 FERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNVTSTNAPISVP 77
Query: 619 VGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCP 678
VG TLGRI++VLG PID G + ++++ PIH P ++ Q + ++LETGIKVIDLLCP
Sbjct: 78 VGPATLGRIMDVLGRPIDEAGPVATEERLPIHREAPSYAEQAASTDLLETGIKVIDLLCP 137
Query: 679 FLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV 738
F KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+SNV
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNV 197
Query: 739 LDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGT 792
LDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGT
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVDNIYRYTLAGT 257
Query: 793 EVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTF 852
EVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+TTF
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTF 317
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA GIYPAIDPL+S S+QLDP +VG+EHY++A V+ LQ+YKELKD
Sbjct: 318 AHLDATVVLSRDIASQGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKELKD 377
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 179/420 (42%), Gaps = 39/420 (9%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+ + ++++F N+V + Q++GT E Q G V + + + L +G
Sbjct: 8 QIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNV 67
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T +PVG LGRI++ G ID + R + + AP ++ + + L T
Sbjct: 68 TSTNAPISVPVGPATLGRIMDVLGRPIDEAGPVATEERLPIHREAPSYAEQAASTDLLET 127
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 128 GIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 187
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL------GQDCLIIYD 356
+++K N +D +V + + TG T+ EYFRD G+D L+ D
Sbjct: 188 FYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVD 247
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P V Y L E + +++I + +G+
Sbjct: 248 NIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKSGS 294
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VG 471
+T+ + D+T P + D + L ++ + PAI+ S SR V
Sbjct: 295 ITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAIDPLDSTSRQLDPLVV 354
Query: 472 GAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
G Y+I + ++ +L +Y+EL+ +L K +Y KI Q H
Sbjct: 355 GQEHYEIARS----VQNVLQRYKELKDIIAILGMDELSEEDKLVVYRARKIQRFFSQPFH 410
>gi|728923|sp|P41168.1|ATPB_THIFE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|154674|gb|AAA53127.1| F1F0-ATPase beta subunit [Acidithiobacillus ferrooxidans]
Length = 468
Score = 504 bits (1297), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/343 (68%), Positives = 282/343 (82%), Gaps = 1/343 (0%)
Query: 570 IINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILN 629
I+ NN++I +VQ Q+G+ + R IA G + G+KR V TG PI PVG TLGRI+N
Sbjct: 37 IVVDANNLTI-EVQAQLGDGVARGIAMGPSEGLKRGLAVTRTGAPISVPVGHATLGRIMN 95
Query: 630 VLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFG 689
VLG+P+D KG + ++ + IH P F + +LETGIKVIDL+CPF KGGK+GLFG
Sbjct: 96 VLGEPVDGKGPVQTEDRQAIHRPAPAFDELAASTEVLETGIKVIDLVCPFAKGGKVGLFG 155
Query: 690 GAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQM 749
GAGVGKTV MMELIRNIAIEH G SVF GVGER+REGNDFYHEM +S VLDKV+L+YGQM
Sbjct: 156 GAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVLDKVALVYGQM 215
Query: 750 NEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQP 809
NEP GNRLR LTGL++AE FR+ G+D+L+FIDNI+R+ LAGTEVSA+LGR PSAVGYQP
Sbjct: 216 NEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYPLAGTEVSALLGRMPSAVGYQP 275
Query: 810 TLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELG 869
TLAEEMG+LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELG
Sbjct: 276 TLAEEMGQLQERITSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELG 335
Query: 870 IYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IYPA+DPL+S+S+QLDP IVG+EHY VA + LQ+YKEL+D
Sbjct: 336 IYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQD 378
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 145/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI+N GE +D K ++R+ + + AP +
Sbjct: 66 EGLKRGLAVTRTGAPISVPVGHATLGRIMNVLGEPVDGKGPVQTEDRQAIHRPAPAFDEL 125
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ E L TGIK ID + P KG + + G GKT + ++ I N ++ ++ +
Sbjct: 126 AASTEVLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGV 185
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ +D +V + + + TG T+ E+FRD G+D L+
Sbjct: 186 GERTREGNDFYHEMTDSGVLDKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILM 245
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E ++ +++I +
Sbjct: 246 FIDNIFRYPLAGTEVSALLGR------MPSAVGY-QPTLAEEMGQL------QERITSTK 292
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 293 VGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPALDPLDSFSRQLDP 352
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + + L +Y+EL+
Sbjct: 353 QIVGQEHYDVARS----CQKTLQRYKELQ 377
>gi|194291166|ref|YP_002007073.1| F0F1 ATP synthase subunit beta [Cupriavidus taiwanensis LMG 19424]
gi|226740184|sp|B3R7L5.1|ATPB_CUPTR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|193225001|emb|CAQ71012.1| F1 sector of membrane-bound ATP synthase, beta subunit [Cupriavidus
taiwanensis LMG 19424]
Length = 467
Score = 504 bits (1297), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG PI PVG TLGRI++VLG PID G
Sbjct: 48 EVQQQLGDGVVRTIALGSSDGLRRGMAVKSTGAPISVPVGHGTLGRIMDVLGRPIDEAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S + IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IASDELRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG EHY+VA V+ LQ+YKEL+D
Sbjct: 348 SRQLDPQVVGTEHYEVARRVQQTLQRYKELRD 379
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 138/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID + + AP +
Sbjct: 68 GLRRGMAVKSTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIASDELRAIHQKAPKFDELS 127
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 128 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 187
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 188 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 247
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 248 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 294
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 295 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQ 354
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y++ ++ ++ L +Y+EL
Sbjct: 355 VVGTEHYEVARR----VQQTLQRYKEL 377
>gi|293611147|ref|ZP_06693445.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375136696|ref|YP_004997346.1| F0F1 ATP synthase subunit beta [Acinetobacter calcoaceticus PHEA-2]
gi|427422622|ref|ZP_18912797.1| ATP synthase F1, beta subunit [Acinetobacter baumannii WC-136]
gi|292826398|gb|EFF84765.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325124141|gb|ADY83664.1| F0F1 ATP synthase subunit beta [Acinetobacter calcoaceticus PHEA-2]
gi|425700532|gb|EKU70114.1| ATP synthase F1, beta subunit [Acinetobacter baumannii WC-136]
Length = 464
Score = 504 bits (1297), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/360 (66%), Positives = 291/360 (80%), Gaps = 7/360 (1%)
Query: 560 FEINII-KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTP 618
FE N + K + + + + +VQQQ+G+ +VRTIA G+T G+KR V T PI P
Sbjct: 18 FERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNVTSTNAPISVP 77
Query: 619 VGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCP 678
VG TLGRI++VLG PID G + ++++ PIH P ++ Q + ++LETGIKVIDLLCP
Sbjct: 78 VGPATLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLETGIKVIDLLCP 137
Query: 679 FLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV 738
F KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+SNV
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNV 197
Query: 739 LDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGT 792
LDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGT
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVDNIYRYTLAGT 257
Query: 793 EVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTF 852
EVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+TTF
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTF 317
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA GIYPAIDPL+S S+QLDP +VG+EHY++A V+ LQ+YKELKD
Sbjct: 318 AHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARAVQNVLQRYKELKD 377
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 181/420 (43%), Gaps = 39/420 (9%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+ + ++++F N+V + Q++GT E Q G V + + + L +G
Sbjct: 8 QIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNV 67
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T +PVG LGRI++ G ID + R + + AP ++ + + L T
Sbjct: 68 TSTNAPISVPVGPATLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLET 127
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 128 GIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 187
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL------GQDCLIIYD 356
+++K N +D +V + + TG T+ EYFRD G+D L+ D
Sbjct: 188 FYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVD 247
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P V Y L E + +++I + +G+
Sbjct: 248 NIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKSGS 294
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VG 471
+T+ + D+T P + D + L ++ +S PAI+ S SR V
Sbjct: 295 ITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVV 354
Query: 472 GAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQL--YNGEKISLLMKQKPH 529
G Y+I + ++ +L +Y+EL+ ++ + +L Y KI Q H
Sbjct: 355 GQEHYEIARA----VQNVLQRYKELKDIIAILGMDELAEEDKLVVYRARKIQRFFSQPFH 410
>gi|112791392|gb|ABI21966.1| ATP synthase beta subunit, partial [Pantoea stewartii]
Length = 350
Score = 504 bits (1297), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/349 (68%), Positives = 285/349 (81%), Gaps = 7/349 (2%)
Query: 568 FRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLG 625
+ + +KN + + +VQQQ+G +VRTIA G ++G+KR V D KPI PVG TLG
Sbjct: 2 YSALEVKNGDARLVLEVQQQLGGGVVRTIAMGTSDGLKRGLEVADLKKPIQVPVGKATLG 61
Query: 626 RILNVLGDPIDNKGEINSKKKSP-----IHTLPPKFSNQIFNNNILETGIKVIDLLCPFL 680
RI+NVLG+PID KG++ + S IH P + Q + +LETGIKVIDL+CPF
Sbjct: 62 RIMNVLGEPIDMKGDLKEEDGSAVEVSSIHRPAPSYEEQSNSQELLETGIKVIDLMCPFA 121
Query: 681 KGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD 740
KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM +SNV+D
Sbjct: 122 KGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 181
Query: 741 KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGR 800
KV+L+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR
Sbjct: 182 KVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 241
Query: 801 TPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIV 860
PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLDST+
Sbjct: 242 MPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVT 301
Query: 861 LSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
LSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+E
Sbjct: 302 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQE 350
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 145/331 (43%), Gaps = 28/331 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVE-----KIAPG 230
L +G + +K ++PVG LGRI+N GE ID K ++ VE + AP
Sbjct: 37 GLKRGLEVADLKKPIQVPVGKATLGRIMNVLGEPIDMKGDLKEEDGSAVEVSSIHRPAPS 96
Query: 231 IMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICI 289
++ + E L TGIK ID M P KG + + G GKT ++ I N + +
Sbjct: 97 YEEQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSV 156
Query: 290 YVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQ 349
+ +G++ + +++ N +D +V + + TG T+ E FRD G+
Sbjct: 157 FAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 216
Query: 350 DCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKI 409
D L+ D++ ++ A ++S LL R P V Y + + + + +++I
Sbjct: 217 DVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERI 263
Query: 410 FNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSR 323
Query: 470 -----VGGAAQYKIVKKLSGDIRIMLAQYRE 495
V G Y + + ++ +L +Y+E
Sbjct: 324 QLDPLVVGQEHYDVARG----VQSLLQRYQE 350
>gi|251791748|ref|YP_003006469.1| F0F1 ATP synthase subunit beta [Dickeya zeae Ech1591]
gi|247540369|gb|ACT08990.1| ATP synthase F1, beta subunit [Dickeya zeae Ech1591]
Length = 460
Score = 504 bits (1297), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G++R V + PI PVG TLGRI+NVLG+P+D KG
Sbjct: 42 EVQQQLGGGLVRCIAMGSSDGLRRGLKVTNLAHPIEVPVGKATLGRIMNVLGEPVDMKGP 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 102 IGEEERWAIHRAAPTYEELSNSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP G+RLRVA
Sbjct: 162 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGSRLRVA 221
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 222 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 281
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+ LSRQIA LGIYPA+DPL+S
Sbjct: 282 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDST 341
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP IVG+EHY VA V+ LQ+Y+ELKD
Sbjct: 342 SRQLDPLIVGQEHYDVARGVQSILQRYQELKD 373
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K E+PVG LGRI+N GE +D K + R + + AP +
Sbjct: 62 GLRRGLKVTNLAHPIEVPVGKATLGRIMNVLGEPVDMKGPIGEEERWAIHRAAPTYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGSRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 289 GSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + ++ +L +Y+EL+
Sbjct: 349 IVGQEHYDVARG----VQSILQRYQELK 372
>gi|209515776|ref|ZP_03264639.1| ATP synthase F1, beta subunit [Burkholderia sp. H160]
gi|209503803|gb|EEA03796.1| ATP synthase F1, beta subunit [Burkholderia sp. H160]
Length = 464
Score = 504 bits (1297), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R T+V +TG PI PVG TLGRI++VLG PID G
Sbjct: 45 EVQQQLGDGVVRTICLGASDGLRRGTVVKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGP 104
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+S+ IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 105 ISSETTRAIHQKAPAFDQLSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 164
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 165 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 224
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 225 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 284
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 285 RITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 344
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP+++GEEHY + V+ LQ+YKEL+D
Sbjct: 345 SRQIDPHVIGEEHYSITRGVQQTLQRYKELRD 376
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 153/380 (40%), Gaps = 33/380 (8%)
Query: 132 RCLNQTLNIKFANNT--------VLSGQINGTTGYEEAAAQGFV-AVLIDDLKNLTQGQK 182
+C+ ++++F T +L G T ++ G V + + L +G
Sbjct: 13 QCIGAVIDVEFPRETMPKIYDALILEGS-ELTLEVQQQLGDGVVRTICLGASDGLRRGTV 71
Query: 183 CFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLL 242
T +PVG LGRI++ G ID + + + AP E L
Sbjct: 72 VKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGPISSETTRAIHQKAPAFDQLSPSTELLE 131
Query: 243 TGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLI 301
TGIK ID + P KG + + G GKT ++ I N K ++ +G++
Sbjct: 132 TGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGN 191
Query: 302 NVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKH 361
+ +++K N +D +V + + TG T+ E+FRD G D L D++ +
Sbjct: 192 DFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRF 251
Query: 362 AWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFP 421
A ++S LL R P V Y L E K+ +++I + G++T+
Sbjct: 252 TLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKTGSITSVQ 298
Query: 422 IIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQY 476
+ D+T P D + L ++ + PA++ S SR V G Y
Sbjct: 299 AVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPHVIGEEHY 358
Query: 477 KIVKKLSGDIRIMLAQYREL 496
I + ++ L +Y+EL
Sbjct: 359 SITR----GVQQTLQRYKEL 374
>gi|262371347|ref|ZP_06064665.1| membrane-bound ATP synthase [Acinetobacter johnsonii SH046]
gi|381198499|ref|ZP_09905837.1| F0F1 ATP synthase subunit beta [Acinetobacter lwoffii WJ10621]
gi|262313684|gb|EEY94733.1| membrane-bound ATP synthase [Acinetobacter johnsonii SH046]
Length = 464
Score = 504 bits (1297), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/360 (66%), Positives = 291/360 (80%), Gaps = 7/360 (1%)
Query: 560 FEINII-KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTP 618
FE N + K + +++ + +VQQQ+G+ +VRTIA G+T G+KR V +T PI P
Sbjct: 18 FERNSVPKIYDALHVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNVTNTNAPISVP 77
Query: 619 VGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCP 678
VG TLGRI++VLG PID G + ++ + PIH P ++ Q + ++LETGIKVIDLLCP
Sbjct: 78 VGTATLGRIMDVLGRPIDEAGPVATEARLPIHRQAPSYAEQAASTDLLETGIKVIDLLCP 137
Query: 679 FLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV 738
F KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+SNV
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNV 197
Query: 739 LDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGT 792
LDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGT
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAGT 257
Query: 793 EVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTF 852
EVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+TTF
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTF 317
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA GIYPAIDPL+S S+QLDP +VG EHY++A V+ LQ+YKELKD
Sbjct: 318 AHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGAEHYEIARSVQNVLQRYKELKD 377
Score = 102 bits (255), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 181/420 (43%), Gaps = 39/420 (9%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+ + ++++F N+V + ++GT E Q G V + + + L +G
Sbjct: 8 QIIGAVIDVEFERNSVPKIYDALHVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNV 67
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T +PVG LGRI++ G ID + R + + AP ++ + + L T
Sbjct: 68 TNTNAPISVPVGTATLGRIMDVLGRPIDEAGPVATEARLPIHRQAPSYAEQAASTDLLET 127
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 128 GIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 187
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYD 356
+++K N +D +V + + TG T+ EYFRD G+D L+ D
Sbjct: 188 FYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVD 247
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P V Y + + + + +++I + +G+
Sbjct: 248 NIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKSGS 294
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VG 471
+T+ + D+T P + D + L ++ +S PAI+ S SR V
Sbjct: 295 ITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVV 354
Query: 472 GAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
GA Y+I + ++ +L +Y+EL+ +L K +Y KI Q H
Sbjct: 355 GAEHYEIARS----VQNVLQRYKELKDIIAILGMDELAEEDKLTVYRARKIQRFFSQPFH 410
>gi|404379661|ref|ZP_10984715.1| ATP synthase subunit beta [Simonsiella muelleri ATCC 29453]
gi|294483125|gb|EFG30812.1| ATP synthase subunit beta [Simonsiella muelleri ATCC 29453]
Length = 465
Score = 504 bits (1297), Expect = e-139, Method: Compositional matrix adjust.
Identities = 236/338 (69%), Positives = 279/338 (82%), Gaps = 6/338 (1%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T+G+KR V +TG PI PVG TLGRI++VLG+P+D G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTDGLKRGLAVNNTGAPITVPVGKATLGRIMDVLGNPVDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S + IH PKF +LETGIKVIDLLCPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGSNETRAIHQPAPKFDELSSATELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFYHEMK+SNVLDKV+++YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
LTGLS+AE FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 220 LTGLSMAEHFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 279
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG+LQERI+ST+ G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+
Sbjct: 280 MGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAV 339
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP ++G+EHY VA V+ LQKYKEL+D
Sbjct: 340 DPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRD 377
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 151/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G +D + + AP +
Sbjct: 60 GLKRGLAVNNTGAPITVPVGKATLGRIMDVLGNPVDEAGPIGSNETRAIHQPAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 SATELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG ++ E+FRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLSMAEHFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|402757045|ref|ZP_10859301.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. NCTC 7422]
Length = 464
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/360 (66%), Positives = 290/360 (80%), Gaps = 7/360 (1%)
Query: 560 FEINII-KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTP 618
FE N + K + + + + +VQQQ+G+ +VRTIA G+T G+KR V T PI P
Sbjct: 18 FERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNVTSTNAPISVP 77
Query: 619 VGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCP 678
VG TLGRI++VLG PID G + ++++ PIH P ++ Q + ++LETGIKVIDLLCP
Sbjct: 78 VGPATLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLETGIKVIDLLCP 137
Query: 679 FLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV 738
F KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+SNV
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNV 197
Query: 739 LDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGT 792
LDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGT
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVDNIYRYTLAGT 257
Query: 793 EVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTF 852
EVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+TTF
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTF 317
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA GIYPAIDPL+S S+QLDP +VG EHY++A V+ LQ+YKELKD
Sbjct: 318 AHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGAEHYEIARSVQNVLQRYKELKD 377
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 182/420 (43%), Gaps = 39/420 (9%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+ + ++++F N+V + Q++GT E Q G V + + + L +G
Sbjct: 8 QIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNV 67
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T +PVG LGRI++ G ID + R + + AP ++ + + L T
Sbjct: 68 TSTNAPISVPVGPATLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLET 127
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 128 GIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 187
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL------GQDCLIIYD 356
+++K N +D +V + + TG T+ EYFRD G+D L+ D
Sbjct: 188 FYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVD 247
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P V Y L E + +++I + +G+
Sbjct: 248 NIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKSGS 294
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VG 471
+T+ + D+T P + D + L ++ +S PAI+ S SR V
Sbjct: 295 ITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVV 354
Query: 472 GAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQL--YNGEKISLLMKQKPH 529
GA Y+I + ++ +L +Y+EL+ ++ + +L Y KI Q H
Sbjct: 355 GAEHYEIARS----VQNVLQRYKELKDIIAILGMDELAEEDKLVVYRARKIQRFFSQPFH 410
>gi|421889969|ref|ZP_16320954.1| ATP synthase, F1 sector, beta subunit [Ralstonia solanacearum
K60-1]
gi|378964678|emb|CCF97702.1| ATP synthase, F1 sector, beta subunit [Ralstonia solanacearum
K60-1]
Length = 467
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG I PVG TLGRI++VLG PID G
Sbjct: 48 EVQQQLGDGVVRTIALGSSDGLRRGMAVKGTGAAISVPVGHGTLGRIMDVLGRPIDEAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++K IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IACEEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY+VA+ VK LQ+YKEL+D
Sbjct: 348 SRQLDPQVVGQEHYEVADRVKKTLQRYKELRD 379
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 139/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID + + + + AP +
Sbjct: 68 GLRRGMAVKGTGAAISVPVGHGTLGRIMDVLGRPIDEAGPIACEEKRAIHQKAPKFDELS 127
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 128 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 187
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 188 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 247
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 248 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 294
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 295 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQ 354
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y++ + ++ L +Y+EL
Sbjct: 355 VVGQEHYEVADR----VKKTLQRYKEL 377
>gi|448239782|ref|YP_007403835.1| F0F1 ATP synthase subunit beta [Serratia marcescens WW4]
gi|445210146|gb|AGE15816.1| F0F1 ATP synthase subunit beta [Serratia marcescens WW4]
Length = 460
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 238/361 (65%), Positives = 291/361 (80%), Gaps = 2/361 (0%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + + K + + ++N + +VQQQ+G +VR IA G ++G++R V +
Sbjct: 13 VVDVEFPQDAVPKVYDALEVENGTEKLVLEVQQQLGGGVVRCIAMGTSDGLRRGLKVNNL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
PI PVG TLGRI+NVLG PID KG+I +++ IH P + + +LETGIK
Sbjct: 73 NHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELSNSQELLETGIK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
V+DL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYH
Sbjct: 133 VMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAG 791
EM +SNVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAG
Sbjct: 193 EMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAG 252
Query: 792 TEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTT 851
TEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TT
Sbjct: 253 TEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATT 312
Query: 852 FTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELK 911
F HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+Y+ELK
Sbjct: 313 FAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELK 372
Query: 912 D 912
D
Sbjct: 373 D 373
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 62 GLRRGLKVNNLNHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 122 NSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 182 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 289 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPL 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 349 VVGQEHYDVARG----VQSILQRYQELK 372
>gi|451936868|gb|AGF87180.1| F-type ATP synthase beta subunit [uncultured organism]
gi|451936882|gb|AGF87193.1| F-type ATP synthase beta subunit [uncultured organism]
Length = 465
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG PI PVG TLGRI++VLG PID G
Sbjct: 46 EVQQQLGDGVVRTIALGSSDGLRRGMKVKATGAPISVPVGSGTLGRIMDVLGRPIDEAGP 105
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH PKF + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 106 IQAEEYRSIHQKAPKFDELSPSVELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 165
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEM+ESNVLDKV++++GQMNEP GNRLRVA
Sbjct: 166 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMQESNVLDKVAMVFGQMNEPPGNRLRVA 225
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 226 LTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 285
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 286 RITSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 345
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY VA V+ LQ+YKEL+D
Sbjct: 346 SRQLDPLVVGEEHYNVARAVQATLQRYKELRD 377
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 139/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T +PVG LGRI++ G ID + ++ + AP +
Sbjct: 66 GLRRGMKVKATGAPISVPVGSGTLGRIMDVLGRPIDEAGPIQAEEYRSIHQKAPKFDELS 125
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 126 PSVELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 185
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 186 ERTREGNDFYHEMQESNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFF 245
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 246 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKV 292
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 293 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPL 352
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + + ++ L +Y+EL
Sbjct: 353 VVGEEHYNVARA----VQATLQRYKEL 375
>gi|388256220|ref|ZP_10133401.1| F0F1 ATP synthase subunit beta [Cellvibrio sp. BR]
gi|387939920|gb|EIK46470.1| F0F1 ATP synthase subunit beta [Cellvibrio sp. BR]
Length = 459
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/346 (68%), Positives = 289/346 (83%), Gaps = 1/346 (0%)
Query: 567 YFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGR 626
Y ++ N+++ +VQQQ+G+ +VRTIA G++ G++R +V +T +PI PVG TLGR
Sbjct: 27 YDALVITDGNLTL-EVQQQLGDGVVRTIALGSSEGLRRGLVVTNTNEPIKVPVGKETLGR 85
Query: 627 ILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIG 686
I++VLG+PID G I +++ IH PK+ + +LETGIKVIDL+CPF KGGK+G
Sbjct: 86 IMDVLGNPIDECGPIGEQERMQIHRAAPKYEELAASEELLETGIKVIDLVCPFAKGGKVG 145
Query: 687 LFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIY 746
LFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFYHEMK+SNV+DKV+++Y
Sbjct: 146 LFGGAGVGKTVNMMELINNIAKEHSGLSVFAGVGERTREGNDFYHEMKDSNVVDKVAMVY 205
Query: 747 GQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVG 806
GQMNEP GNRLRVALTGL++AE+FR+ GKDVLLF+DNIYR+TLAGTEVSA+LGR PSAVG
Sbjct: 206 GQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVG 265
Query: 807 YQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIA 866
YQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLDST+VLSR IA
Sbjct: 266 YQPTLAEEMGVLQERITSTKIGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIA 325
Query: 867 ELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
GIYPAIDPL+S S+QLDP I+G++HY VA V+ LQ+YKELKD
Sbjct: 326 AKGIYPAIDPLDSTSRQLDPMIIGQDHYNVARGVQTVLQRYKELKD 371
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 146/331 (44%), Gaps = 23/331 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T + ++PVG E LGRI++ G ID + R + + AP +
Sbjct: 59 EGLRRGLVVTNTNEPIKVPVGKETLGRIMDVLGNPIDECGPIGEQERMQIHRAAPKYEEL 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +
Sbjct: 119 AASEELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVVDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ PAI+ S SR
Sbjct: 286 IGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAIDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELESF 499
+ G Y + + ++ +L +Y+EL+
Sbjct: 346 MIIGQDHYNVARG----VQTVLQRYKELKDI 372
>gi|390950892|ref|YP_006414651.1| ATP synthase F1 subcomplex subunit beta [Thiocystis violascens DSM
198]
gi|390427461|gb|AFL74526.1| ATP synthase F1 subcomplex beta subunit [Thiocystis violascens DSM
198]
Length = 461
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T+G++R V+ TG PI PVG TLGRI++VLG+PID G+
Sbjct: 40 EVQQQLGDGVVRTIAMGSTDGLQRGLDVLKTGAPIQVPVGQATLGRIMDVLGNPIDELGD 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ +++ IH PK +Q + ILETGIKVIDL+ P KGGK+GLFGGAGVGKTV +M
Sbjct: 100 VPCEERWSIHRAAPKLEDQAASTEILETGIKVIDLIMPIAKGGKVGLFGGAGVGKTVTLM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA EH G SVF GVGER+REGNDFYHEMKESNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMKESNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLA EMG LQE
Sbjct: 220 LTGLTMAEFFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+ST+ G+ITS QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELGIYPA+DPL+S
Sbjct: 280 RITSTRTGSITSFQAVYVPADDLTDPSPATTFAHLDATLVLSRQIAELGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+ LDP +VG EHY+ A V+ LQ+YKELKD
Sbjct: 340 SRILDPNVVGPEHYETARAVQGTLQRYKELKD 371
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T ++PVG LGRI++ G ID + R ++ + AP + D+
Sbjct: 60 GLQRGLDVLKTGAPIQVPVGQATLGRIMDVLGNPIDELGDVPCEERWSIHRAAPKLEDQA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID ++PI KG + + G GKT ++ I N + ++ +G
Sbjct: 120 ASTEILETGIKVIDLIMPIAKGGKVGLFGGAGVGKTVTLMELIRNIAAEHSGFSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G+D L+
Sbjct: 180 ERTREGNDFYHEMKESNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLLF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + L ER I +
Sbjct: 240 IDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQER-------------ITSTRT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+F + D+T P + D + L + PA++ S SR
Sbjct: 287 GSITSFQAVYVPADDLTDPSPATTFAHLDATLVLSRQIAELGIYPAVDPLDSTSRILDPN 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + + G L +Y+EL+
Sbjct: 347 VVGPEHYETARAVQG----TLQRYKELK 370
>gi|403050521|ref|ZP_10905005.1| F0F1 ATP synthase subunit beta [Acinetobacter bereziniae LMG 1003]
gi|445418185|ref|ZP_21434816.1| ATP synthase F1, beta subunit [Acinetobacter sp. WC-743]
gi|444760874|gb|ELW85303.1| ATP synthase F1, beta subunit [Acinetobacter sp. WC-743]
Length = 464
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/360 (66%), Positives = 291/360 (80%), Gaps = 7/360 (1%)
Query: 560 FEINII-KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTP 618
FE N + K + + + + +VQQQ+G+ +VRTIA G+T G+KR V +TG PI P
Sbjct: 18 FERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNVSNTGAPISVP 77
Query: 619 VGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCP 678
VG LGRI++VLG PID G + ++++ PIH P ++ Q + ++LETGIKVIDLLCP
Sbjct: 78 VGTACLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLETGIKVIDLLCP 137
Query: 679 FLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV 738
F KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+SNV
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNV 197
Query: 739 LDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGT 792
LDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGT
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAGT 257
Query: 793 EVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTF 852
EVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+TTF
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTF 317
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA GIYPAIDPL+S S+QLDP +VG EHY++A V+ LQ+YKELKD
Sbjct: 318 AHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGAEHYEIARSVQNVLQRYKELKD 377
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 181/420 (43%), Gaps = 39/420 (9%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+ + ++++F N+V + Q++GT E Q G V + + + L +G
Sbjct: 8 QIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNV 67
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T +PVG LGRI++ G ID + R + + AP ++ + + L T
Sbjct: 68 SNTGAPISVPVGTACLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLET 127
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 128 GIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 187
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYD 356
+++K N +D +V + + TG T+ EYFRD G+D L+ D
Sbjct: 188 FYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVD 247
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P V Y L E + +++I + +G+
Sbjct: 248 NIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKSGS 294
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VG 471
+T+ + D+T P + D + L ++ +S PAI+ S SR V
Sbjct: 295 ITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVV 354
Query: 472 GAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
GA Y+I + ++ +L +Y+EL+ +L K +Y KI Q H
Sbjct: 355 GAEHYEIARS----VQNVLQRYKELKDIIAILGMDELAEEDKLTVYRARKIQRFFSQPFH 410
>gi|237749342|ref|ZP_04579822.1| F0F1-type ATP synthase [Oxalobacter formigenes OXCC13]
gi|229380704|gb|EEO30795.1| F0F1-type ATP synthase [Oxalobacter formigenes OXCC13]
Length = 458
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/356 (67%), Positives = 295/356 (82%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E N+ K + + ++ + +VQQQ+G+ +VRTIA G+++G++R ++ +TG PI+
Sbjct: 16 VEFPRENMPKVYDALKMEGSELTLEVQQQLGDGVVRTIALGSSDGLRRGMVIQNTGNPIM 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
P G+ TLGRI+NVLGDPID +G I ++ ++ IH P + + ILETGIKVIDL+
Sbjct: 76 VPTGEATLGRIMNVLGDPIDEQGPIATEDRASIHRKAPAYDELSPSQEILETGIKVIDLI 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA +H G SVF GVGER+REGNDFYHEMKES
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKES 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+++YGQMNEP GNRLRVALTGL+IAE FR+ G+DVL F+DNIYRFTLAGTEVSA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDQGRDVLFFVDNIYRFTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMGKLQERI+ST G+ITS+QA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGKLQERITSTTTGSITSIQAVYVPADDLTDPSPATTFAHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY+ A +V+ LQ+YKEL+D
Sbjct: 316 STVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGEEHYQTARQVQGILQRYKELRD 371
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 133/311 (42%), Gaps = 23/311 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+P G LGRI+N G+ ID + ++R ++ + AP + E L TGIK ID +
Sbjct: 76 VPTGEATLGRIMNVLGDPIDEQGPIATEDRASIHRKAPAYDELSPSQEILETGIKVIDLI 135
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K + + ++ +G++ + +++K
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKES 195
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
N +D +V + + TG TI E FRD G+D L D++ + A ++S
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDQGRDVLFFVDNIYRFTLAGTEVSA 255
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P + + +L ER + + + + D+
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGKLQERITSTTTGSITSIQ-------------AVYVPADDL 302
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P + D + L ++ + PA++ S SR V G Y+ +++ G
Sbjct: 303 TDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGEEHYQTARQVQG- 361
Query: 486 IRIMLAQYREL 496
+L +Y+EL
Sbjct: 362 ---ILQRYKEL 369
>gi|372272388|ref|ZP_09508436.1| F0F1 ATP synthase subunit beta [Marinobacterium stanieri S30]
Length = 465
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/363 (64%), Positives = 293/363 (80%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E N+ K + + ++ +VQQQ+G+ +VR IA G T G+ R V+TG P+
Sbjct: 16 VEFPRDNVPKVYDALTVEKTGLTLEVQQQLGDGVVRAIAMGQTEGLNRGLETVNTGAPVS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG+PID G I +++ IH P +++Q N +LETGIKVIDL+
Sbjct: 76 VPVGTATLGRIMDVLGNPIDECGPIGEEERYAIHRKAPSYADQAATNELLETGIKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGKIGLFGGAGVGKTVNMMELI NIA +H G SVF GVGER+REGNDFYHEM+E+
Sbjct: 136 CPFAKGGKIGLFGGAGVGKTVNMMELINNIATQHSGLSVFAGVGERTREGNDFYHEMQEA 195
Query: 737 NVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
V++ KV+++YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TL
Sbjct: 196 GVVNVEQFDKSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTL 255
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+
Sbjct: 256 AGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPA 315
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF+HLD+T+VLSRQIAELGIYPAIDPL+S S+QLDP ++G+EHY++A V+ LQ+YKE
Sbjct: 316 TTFSHLDATVVLSRQIAELGIYPAIDPLDSTSRQLDPLVIGQEHYEIARGVQSTLQRYKE 375
Query: 910 LKD 912
LKD
Sbjct: 376 LKD 378
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 147/343 (42%), Gaps = 30/343 (8%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + + L +G + T +PVG LGRI++ G ID + R + +
Sbjct: 52 AIAMGQTEGLNRGLETVNTGAPVSVPVGTATLGRIMDVLGNPIDECGPIGEEERYAIHRK 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV- 286
AP D+ + NE L TGIK ID + P KG + + G GKT ++ I N ++
Sbjct: 112 APSYADQAATNELLETGIKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIATQHSG 171
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCT 339
+ ++ +G++ + ++++ ++ +V + + TG T
Sbjct: 172 LSVFAGVGERTREGNDFYHEMQEAGVVNVEQFDKSKVAMVYGQMNEPPGNRLRVALTGLT 231
Query: 340 IGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKI 399
+ E FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 232 MAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL 284
Query: 400 NKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRP 459
+++I + G++T+ + D+T P S D + L + P
Sbjct: 285 ------QERITSTKTGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRQIAELGIYP 338
Query: 460 AINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
AI+ S SR V G Y+I + ++ L +Y+EL+
Sbjct: 339 AIDPLDSTSRQLDPLVIGQEHYEIARG----VQSTLQRYKELK 377
>gi|357418607|ref|YP_004931627.1| F0F1 ATP synthase subunit beta [Pseudoxanthomonas spadix BD-a59]
gi|355336185|gb|AER57586.1| F0F1 ATP synthase subunit beta [Pseudoxanthomonas spadix BD-a59]
Length = 468
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/365 (64%), Positives = 286/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E ++ K + + + N +VQQQ+G+ IVRTIA G+T+G+KRN + +TGK
Sbjct: 13 VVDVEFPRGDVPKVYDALKVDNTEITLEVQQQLGDGIVRTIALGSTDGLKRNLVATNTGK 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
I PVG TLGRI++VLG PID G + IH P + +Q + +LETGIKVI
Sbjct: 73 AISVPVGKATLGRIMDVLGRPIDEAGPVEGTDTWEIHRAAPSYEDQSSSTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H+G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHEGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLDST+ LSR IA LGIYPA+DPL+S S+QLDP ++G EHY A V+ LQKY
Sbjct: 313 PATTFAHLDSTVTLSRSIASLGIYPAVDPLDSTSRQLDPLVIGNEHYDTARRVQATLQKY 372
Query: 908 KELKD 912
KELKD
Sbjct: 373 KELKD 377
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 139/324 (42%), Gaps = 29/324 (8%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T K +PVG LGRI++ G ID + + + AP D+ S E L TGI
Sbjct: 70 TGKAISVPVGKATLGRIMDVLGRPIDEAGPVEGTDTWEIHRAAPSYEDQSSSTELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N K + ++ +G++ +
Sbjct: 130 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHEGLSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDL 358
+++K N +D +V + + TG T+ EYFRD G+D L D++
Sbjct: 190 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGKGRDVLFFVDNI 249
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P V Y L E + +++I + G++T
Sbjct: 250 YRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKTGSIT 296
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L ++ + PA++ S SR V G
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDSTVTLSRSIASLGIYPAVDPLDSTSRQLDPLVIGN 356
Query: 474 AQYKIVKKLSGDIRIMLAQYRELE 497
Y ++ ++ L +Y+EL+
Sbjct: 357 EHYDTARR----VQATLQKYKELK 376
>gi|226740674|sp|B8CVU5.1|ATPB_SHEPW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|212559317|gb|ACJ31771.1| ATP synthase F1, beta subunit [Shewanella piezotolerans WP3]
Length = 458
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/359 (65%), Positives = 291/359 (81%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + + + + +K+ + +VQQQ+G +VRTIA G+++G++R VV++G
Sbjct: 13 VVDVEFPHDAVPQVYDALEIKSEGLVLEVQQQLGGGVVRTIAMGSSDGLRRGLEVVNSGS 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG+ TLGRI+NVLG P+D G I + + IH P + +Q +LETGIKVI
Sbjct: 73 PITVPVGEKTLGRIMNVLGQPVDEAGPIGEEDRYVIHREAPSYEDQSNTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFY+EM
Sbjct: 133 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYYEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTE 793
++S VLDKV+++YGQMNEP GNRLRVALTGL++AE+FR+ GKDVL F+DNIYR+TLAGTE
Sbjct: 193 EDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLFFVDNIYRYTLAGTE 252
Query: 794 VSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFT 853
VSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF
Sbjct: 253 VSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFA 312
Query: 854 HLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY VAN V+ LQ+YKELKD
Sbjct: 313 HLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVANGVQTVLQRYKELKD 371
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 154/359 (42%), Gaps = 25/359 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + +PVG + LGRI+N G+ +D ++R + + AP D+
Sbjct: 60 GLRRGLEVVNSGSPITVPVGEKTLGRIMNVLGQPVDEAGPIGEEDRYVIHREAPSYEDQS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 NTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ +D +V + + TG T+ E FRD G+D L
Sbjct: 180 ERTREGNDFYYEMEDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLFF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPQ 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQ 526
V G Y + + ++ +L +Y+EL+ +L KT ++ KI + Q
Sbjct: 347 VVGQEHYDV----ANGVQTVLQRYKELKDIIAILGMDELSDEDKTTVFRARKIEKYLSQ 401
>gi|90578412|ref|ZP_01234223.1| ATP synthase subunit B [Photobacterium angustum S14]
gi|90441498|gb|EAS66678.1| ATP synthase subunit B [Photobacterium angustum S14]
Length = 461
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQIG +VR IA G+++G++R VV+T PI PVG+ TLGRI+NVLG PID GE
Sbjct: 43 EVQQQIGSGVVRCIAMGSSDGLRRGLDVVNTKAPITVPVGEETLGRIMNVLGTPIDECGE 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I K K IH P + Q ++ +LETG+KVIDL+CPF KGGKIGLFGGAGVGKTVNMM
Sbjct: 103 IGEKTKYAIHREAPSYEEQSNSSELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFY+EMKE+ VLDKV+++YGQMNEP GNRLRVA
Sbjct: 163 ELINNIAKAHSGLSVFTGVGERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL+IAE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTIAESFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LG+YPAIDPL+S
Sbjct: 283 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG++HY VA V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVVGQDHYDVARGVQTVLQRYKELKD 374
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T+ +PVG E LGRI+N G ID + K + + + AP ++
Sbjct: 63 GLRRGLDVVNTKAPITVPVGEETLGRIMNVLGTPIDECGEIGEKTKYAIHREAPSYEEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ +E L TG+K ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 123 NSSELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + TG TI E FRD G+D L+
Sbjct: 183 ERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLLF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 243 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ PAI+ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPL 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 350 VVGQDHYDVARG----VQTVLQRYKELK 373
>gi|238025753|ref|YP_002909984.1| F0F1 ATP synthase subunit beta [Burkholderia glumae BGR1]
gi|237874947|gb|ACR27280.1| F0F1 ATP synthase subunit beta [Burkholderia glumae BGR1]
Length = 464
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/356 (67%), Positives = 287/356 (80%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + L+ +VQQQ+G+ IVRTI G ++G++R +V +TGKPI
Sbjct: 21 VEFPRESMPKIYDALTLEGTELTLEVQQQLGDGIVRTICLGASDGLRRGVLVKNTGKPIS 80
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G I S+ + IH P F + +LETGIKVIDL+
Sbjct: 81 VPVGKPTLGRIMDVLGRPIDEAGPIESEHQRSIHQKAPAFDELSPSTELLETGIKVIDLV 140
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 141 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 200
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA
Sbjct: 201 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSA 260
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMGKLQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 261 LLGRMPSAVGYQPTLAEEMGKLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLD 320
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 321 ATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYTITRGVQQTLQRYKELRD 376
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 136/317 (42%), Gaps = 23/317 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T K +PVG LGRI++ G ID +++ ++ + AP + E L TGI
Sbjct: 75 TGKPISVPVGKPTLGRIMDVLGRPIDEAGPIESEHQRSIHQKAPAFDELSPSTELLETGI 134
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID + P KG + + G GKT ++ I N K ++ +G++ +
Sbjct: 135 KVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFY 194
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
+++K N +D +V + + TG T+ E+FRD G D L D++ + A
Sbjct: 195 HEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLA 254
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P V Y L E K+ +++I + G++T+ +
Sbjct: 255 GTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKTGSITSVQAVY 301
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P D + L ++ + PA++ S SR V G Y I
Sbjct: 302 VPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYTIT 361
Query: 480 KKLSGDIRIMLAQYREL 496
+ ++ L +Y+EL
Sbjct: 362 RG----VQQTLQRYKEL 374
>gi|452127071|ref|ZP_21939654.1| F0F1 ATP synthase subunit beta [Bordetella holmesii F627]
gi|452130443|ref|ZP_21943015.1| F0F1 ATP synthase subunit beta [Bordetella holmesii H558]
gi|451920368|gb|EMD70514.1| F0F1 ATP synthase subunit beta [Bordetella holmesii H558]
gi|451922166|gb|EMD72311.1| F0F1 ATP synthase subunit beta [Bordetella holmesii F627]
Length = 466
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG PI PVG TLGRI++VLG PID G
Sbjct: 47 EVQQQLGDGVVRTIALGSSDGLRRGMPVNRTGAPISVPVGHGTLGRIMDVLGRPIDEAGP 106
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + +K IH PKF + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 107 IQADEKRAIHQHAPKFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 166
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEM+ESNVLDKV++++GQMNEP GNRLRVA
Sbjct: 167 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVA 226
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 227 LTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 286
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 287 RITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSS 346
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY+VA V+ LQ+YKEL+D
Sbjct: 347 SRQLDPQVVGEEHYQVARGVQQTLQRYKELRD 378
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 147/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID + + + AP +
Sbjct: 67 GLRRGMPVNRTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIQADEKRAIHQHAPKFDELS 126
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 127 PSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 186
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 187 ERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFF 246
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 247 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 293
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 294 GSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSSSRQLDPQ 353
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y++ + ++ L +Y+EL +L K + KI + Q
Sbjct: 354 VVGEEHYQVARG----VQQTLQRYKELRDIIAILGMDELSPEDKQAVARARKIQRFLSQP 409
Query: 528 PH 529
H
Sbjct: 410 FH 411
>gi|119896449|ref|YP_931662.1| F0F1 ATP synthase subunit alpha [Azoarcus sp. BH72]
gi|158512903|sp|A1K1S0.1|ATPA_AZOSB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|119668862|emb|CAL92775.1| ATP synthase alpha chain [Azoarcus sp. BH72]
Length = 512
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 230/404 (56%), Positives = 311/404 (76%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++T+G T +I E+PVG EL+GR+VN+ G+ ID K K + +EK+
Sbjct: 73 AVVLGEYEHITEGDTVKATGRILEVPVGPELIGRVVNALGQPIDGKGPINAKLTDKIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KS+DSM+PIG+GQRELIIGDRQTGKT +A+D IINQK +N+
Sbjct: 133 APGVIARQSVSQPVQTGLKSVDSMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGQNMF 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ M+YT+VVAATA++SAA QY+S Y GCT+GEYFRD
Sbjct: 193 CVYVAIGQKASTIANVVRKLEENGAMEYTIVVAATASESAAMQYLSAYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LI+YDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 253 GQDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA P+IET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K+VKKLSG IR LAQYREL +F++F+SDLD T+ QL G +++ LMK
Sbjct: 373 SVSRVGGAAQTKVVKKLSGGIRTDLAQYRELAAFAQFASDLDDATRKQLERGRRVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q + S+ E+ I L + N +F + + ++ FE + ++ +
Sbjct: 433 QPQYAPLSVAEMAITLYAVNNGYFDDVEVARVLAFESGLQQFVK 476
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 154/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I V TG+ + PVG +GR++N LG PID KG IN+K I
Sbjct: 71 VGAVVLGEYEHITEGDTVKATGRILEVPVGPELIGRVVNALGQPIDGKGPINAKLTDKIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K +D + P +G + + G GKT ++ I N ++
Sbjct: 131 KVAPGVIARQSVSQPVQTGLKSVDSMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGQN 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C V++ +G+++ + +++E+ ++ ++ +E + + A G ++ E F
Sbjct: 191 MFC-VYVAIGQKASTIANVVRKLEENGAMEYTIVVAATASESAAMQYLSAYAGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A +VS +L R P Y + +L ER +
Sbjct: 250 RDRGQDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 310 EKFTNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G KV + ++ L +Y+EL
Sbjct: 370 AGISVSR-----VGGAAQTKVVKKLSGGIRTDLAQYREL 403
>gi|112791364|gb|ABI21952.1| ATP synthase beta subunit, partial [Enterobacter cancerogenus]
Length = 421
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G++R V PI PVG TLGRI+NVLG+P+D KG
Sbjct: 17 EVQQQLGGGLVRCIAMGSSDGLRRGLKVTSLAHPIEVPVGKATLGRIMNVLGEPVDMKGP 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRAAPTYEELSNSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP G+RLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGSRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+ LSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP IVG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLIVGQEHYDVARGVQSILQRYQELKD 348
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K E+PVG LGRI+N GE +D K + R + + AP +
Sbjct: 37 GLRRGLKVTSLAHPIEVPVGKATLGRIMNVLGEPVDMKGPIGEEERWAIHRAAPTYEELS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGSRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 217 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + ++ +L +Y+EL+
Sbjct: 324 IVGQEHYDVARG----VQSILQRYQELK 347
>gi|384227464|ref|YP_005619209.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
gi|345538404|gb|AEO08381.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
Length = 465
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/366 (67%), Positives = 293/366 (80%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
I +E + ++ K + + +KN I +VQQQ+G +VRTIA G+++G+KR +V D
Sbjct: 13 IVDVEFNQDSVPKIYNALEVKNKEYKLILEVQQQLGGGVVRTIAMGSSDGLKRGLVVTDL 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKS-----PIHTLPPKFSNQIFNNNIL 666
G I PVG+ TLGRI+NVLG+ IDNKG + +K + IH P + + IL
Sbjct: 73 GHYIKVPVGEATLGRIINVLGETIDNKGILKNKNATDIEYWEIHRAAPSYKELASSREIL 132
Query: 667 ETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREG 726
ETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIA+EH G SVF GVGER+REG
Sbjct: 133 ETGIKVIDLICPFSKGGKVGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFTGVGERTREG 192
Query: 727 NDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
NDFYHEM +S VLDKVSL+YGQMNEP GNRLRVA TGL+IAE+FR+ GKDVLLFIDNIYR
Sbjct: 193 NDFYHEMNDSKVLDKVSLVYGQMNEPPGNRLRVAFTGLTIAEKFRDEGKDVLLFIDNIYR 252
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDP
Sbjct: 253 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGLLQERITSTKKGSITSVQAVYVPADDLTDP 312
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLDST+ LSRQIA LGIYPAIDPL S S+QLDP IVG+EHY+ A V+ LQ+
Sbjct: 313 SPATTFAHLDSTVTLSRQIASLGIYPAIDPLNSTSRQLDPDIVGDEHYETALGVQSILQR 372
Query: 907 YKELKD 912
Y+ELKD
Sbjct: 373 YQELKD 378
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 125/285 (43%), Gaps = 19/285 (6%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVE-----KIAPGIMDRESVNEPLLTGI 245
++PVG LGRI+N GE IDNK KN +E + AP + S E L TGI
Sbjct: 77 KVPVGEATLGRIINVLGETIDNKGILKNKNATDIEYWEIHRAAPSYKELASSREILETGI 136
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID + P KG + + G GKT ++ I N + ++ +G++ +
Sbjct: 137 KVIDLICPFSKGGKVGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFTGVGERTREGNDFY 196
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
+++ +D +V + + +TG TI E FRD G+D L+ D++ ++ A
Sbjct: 197 HEMNDSKVLDKVSLVYGQMNEPPGNRLRVAFTGLTIAEKFRDEGKDVLLFIDNIYRYTLA 256
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P + + + + L +++I + G++T+ +
Sbjct: 257 GTEVSALLGRMPSAVGY-------------QPTLAEEMGLLQERITSTKKGSITSVQAVY 303
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
D+T P + D + L + + PAI+ S SR
Sbjct: 304 VPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAIDPLNSTSR 348
>gi|406040379|ref|ZP_11047734.1| F0F1 ATP synthase subunit beta [Acinetobacter ursingii DSM 16037 =
CIP 107286]
Length = 464
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/360 (66%), Positives = 290/360 (80%), Gaps = 7/360 (1%)
Query: 560 FEINII-KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTP 618
FE N + K + + + + +VQQQ+G+ +VRTIA G+T G+KR V +T PI P
Sbjct: 18 FERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNVTNTHAPISVP 77
Query: 619 VGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCP 678
VG TLGRI++VLG PID G + ++ + PIH P ++ Q + ++LETGIKVIDLLCP
Sbjct: 78 VGPATLGRIMDVLGRPIDEAGPVATEARLPIHRQAPSYAEQAASTDLLETGIKVIDLLCP 137
Query: 679 FLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV 738
F KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+SNV
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNV 197
Query: 739 LDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGT 792
LDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGT
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAGT 257
Query: 793 EVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTF 852
EVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+TTF
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTF 317
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA GIYPAIDPL+S S+QLDP +VG EHY++A V+ LQ+YKELKD
Sbjct: 318 AHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGAEHYEIARSVQNVLQRYKELKD 377
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 183/420 (43%), Gaps = 39/420 (9%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+ + ++++F N+V + Q++GT E Q G V + + + L +G
Sbjct: 8 QIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNV 67
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T +PVG LGRI++ G ID + R + + AP ++ + + L T
Sbjct: 68 TNTHAPISVPVGPATLGRIMDVLGRPIDEAGPVATEARLPIHRQAPSYAEQAASTDLLET 127
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 128 GIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 187
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYD 356
+++K N +D +V + + TG T+ EYFRD G+D L+ D
Sbjct: 188 FYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVD 247
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P V Y + + + + +++I + +G+
Sbjct: 248 NIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKSGS 294
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VG 471
+T+ + D+T P + D + L ++ +S PAI+ S SR V
Sbjct: 295 ITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVV 354
Query: 472 GAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQL--YNGEKISLLMKQKPH 529
GA Y+I + ++ +L +Y+EL+ ++ + +L Y KI Q H
Sbjct: 355 GAEHYEIARS----VQNVLQRYKELKDIIAILGMDELAEEDKLVVYRARKIQRFFSQPFH 410
>gi|217968672|ref|YP_002353906.1| F0F1 ATP synthase subunit beta [Thauera sp. MZ1T]
gi|217505999|gb|ACK53010.1| ATP synthase F1, beta subunit [Thauera sp. MZ1T]
Length = 466
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V +TG I PVG TLGRI++VLG PID+ G
Sbjct: 47 EVQQQLGDGVVRTIAMGSSDGLRRGMKVANTGTQISVPVGMGTLGRIMDVLGRPIDDAGP 106
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + + IH PKF + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 107 IETDELRAIHQKAPKFDELSPSVELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 166
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 167 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 226
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQE
Sbjct: 227 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 286
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 287 RITSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 346
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY VA +V+ LQKYKEL+D
Sbjct: 347 SRQLDPLVVGEEHYNVARQVQMTLQKYKELRD 378
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 137/327 (41%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T +PVG LGRI++ G ID+ + + AP +
Sbjct: 67 GLRRGMKVANTGTQISVPVGMGTLGRIMDVLGRPIDDAGPIETDELRAIHQKAPKFDELS 126
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 127 PSVELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 186
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 187 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 246
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + RL ER I +
Sbjct: 247 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKV 293
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 294 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPL 353
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + ++ +++ L +Y+EL
Sbjct: 354 VVGEEHYNVARQ----VQMTLQKYKEL 376
>gi|56477131|ref|YP_158720.1| ATP synthase F0F1 subunit alpha [Aromatoleum aromaticum EbN1]
gi|81357644|sp|Q5P4E4.1|ATPA_AZOSE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|56313174|emb|CAI07819.1| F1-ATP synthase, alpha subunit [Aromatoleum aromaticum EbN1]
Length = 512
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 232/407 (57%), Positives = 314/407 (77%), Gaps = 2/407 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++T+G T +I E+PVG EL+GR+VN+ G+ ID K K + +EK+
Sbjct: 73 AVVLGEYEHITEGDPVKATGRILEVPVGPELIGRVVNALGQPIDGKGPINAKLTDKIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KS+D+M+PIG+GQRELIIGDRQTGKT +A+D IINQK +++
Sbjct: 133 APGVIWRQSVSQPVQTGLKSVDAMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGQDMF 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ + M+YT+VVAATA++SAA Q+I+PY+GCT+GEYFRD
Sbjct: 193 CVYVAIGQKASTIANVVRKLEEHGAMEYTIVVAATASESAAMQFIAPYSGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LIIYDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S+++ +EK
Sbjct: 253 GQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVSADHVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFLDT+LFN+ RPAIN G+
Sbjct: 313 TNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLDTDLFNAGIRPAINAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKLSG IR LAQYREL +F++F+SDLD T+ QL G +++ LMK
Sbjct: 373 SVSRVGGAAQTKVIKKLSGGIRTDLAQYRELAAFAQFASDLDDATRKQLERGRRVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIIN 572
Q + S+ ++ I L + N +F + + ++ FE + +Y + N
Sbjct: 433 QPQYAPLSVADMAITLYAVNNGYFDDVEVPRLLAFESGLQQYVKAKN 479
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 152/339 (44%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I V TG+ + PVG +GR++N LG PID KG IN+K I
Sbjct: 71 VGAVVLGEYEHITEGDPVKATGRILEVPVGPELIGRVVNALGQPIDGKGPINAKLTDKIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K +D + P +G + + G GKT ++ I N +
Sbjct: 131 KVAPGVIWRQSVSQPVQTGLKSVDAMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGQD 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C V++ +G+++ + +++E ++ ++ +E + + +G ++ E F
Sbjct: 191 MFC-VYVAIGQKASTIANVVRKLEEHGAMEYTIVVAATASESAAMQFIAPYSGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A ++S +L R P Y + +L ER S
Sbjct: 250 RDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVSADHV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 310 EKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLDTDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
S S+ + G KV + ++ L +Y+EL
Sbjct: 370 AGISVSR-----VGGAAQTKVIKKLSGGIRTDLAQYREL 403
>gi|218676677|ref|YP_002395496.1| F0F1 ATP synthase subunit beta [Vibrio splendidus LGP32]
gi|218324945|emb|CAV26767.1| ATP synthase subunit B [Vibrio splendidus LGP32]
Length = 461
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +IVR IA G ++G++R V +TG PI PVG+ TLGRI+NVLG PID GE
Sbjct: 43 EVQQQLGSSIVRCIAMGTSDGLRRGLTVENTGSPITVPVGEETLGRIMNVLGQPIDECGE 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I K+ IH P + Q + +LETG+KVIDL+CPF KGGKIGLFGGAGVGKTVNMM
Sbjct: 103 IGQKESYEIHREAPSYEEQANSTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFY+EMKE+ VLDKV+++YGQMNEP GNRLRVA
Sbjct: 163 ELINNIAKAHSGLSVFTGVGERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+ST+ G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LG+YPAIDPL+S
Sbjct: 283 RITSTRQGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY +A +V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVVGQEHYDIAQKVQTTLQRYKELKD 374
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 148/346 (42%), Gaps = 25/346 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG E LGRI+N G+ ID + K + + AP ++ + E L TG+K ID +
Sbjct: 79 VPVGEETLGRIMNVLGQPIDECGEIGQKESYEIHREAPSYEEQANSTELLETGVKVIDLI 138
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K + + ++ +G++ + ++K
Sbjct: 139 CPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTGVGERTREGNDFYYEMKEA 198
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
+D +V + + TG T+ E FRD G+D L+ D++ ++ A ++S
Sbjct: 199 GVLDKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSA 258
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P V Y L E + +++I + G++T+ + D+
Sbjct: 259 LLGR------MPSAVGY-QPTLAEEMGVL------QERITSTRQGSITSIQAVYVPADDL 305
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P + D + L N+ PAI+ S SR V G Y I +K
Sbjct: 306 TDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPLVVGQEHYDIAQK---- 361
Query: 486 IRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
++ L +Y+EL+ +L K + KI + Q H
Sbjct: 362 VQTTLQRYKELKDIIAILGMDELSTEDKQTVSRARKIERFLTQPYH 407
>gi|157377616|ref|YP_001476216.1| F0F1 ATP synthase subunit beta [Shewanella sediminis HAW-EB3]
gi|189081347|sp|A8G1W5.1|ATPB_SHESH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|157319990|gb|ABV39088.1| ATP synthase F1, beta subunit [Shewanella sediminis HAW-EB3]
Length = 458
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/359 (65%), Positives = 292/359 (81%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + + + + +K+ + +VQQQ+G +VRTIA G+++G++R VV++G
Sbjct: 13 VVDVEFPHDAVPQVYDALEIKSEGLVLEVQQQLGGGVVRTIAMGSSDGLRRGLEVVNSGS 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG+ TLGRI+NVLG+P+D G I + + IH P + +Q + +LETGIKVI
Sbjct: 73 PITVPVGEKTLGRIMNVLGEPVDEAGPIGEEDRYVIHREAPSYEDQSSSTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFY+EM
Sbjct: 133 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYYEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTE 793
++S VLDKV+++YGQMNEP GNRLRVALTGL++AE+FR+ GKDVL F+DNIYR+TLAGTE
Sbjct: 193 EDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLFFVDNIYRYTLAGTE 252
Query: 794 VSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFT 853
VSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF
Sbjct: 253 VSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFA 312
Query: 854 HLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 313 HLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVATGVQTQLQRYKELKD 371
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 153/363 (42%), Gaps = 33/363 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + + +PVG + LGRI+N GE +D ++R + + AP D+
Sbjct: 60 GLRRGLEVVNSGSPITVPVGEKTLGRIMNVLGEPVDEAGPIGEEDRYVIHREAPSYEDQS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 SSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ +D +V + + TG T+ E FRD G+D L
Sbjct: 180 ERTREGNDFYYEMEDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLFF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPQ 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE------SFSKFSSDLDIVTKTQLYNGEKISLL 523
V G Y + ++ L +Y+EL+ + S D KT ++ KI
Sbjct: 347 VVGQEHYDVATG----VQTQLQRYKELKDIIAILGMDELSDD----DKTTVFRARKIEKY 398
Query: 524 MKQ 526
+ Q
Sbjct: 399 LSQ 401
>gi|348617859|ref|ZP_08884393.1| ATP synthase subunit alpha (ATPase subunit alpha) (ATP synthase F1
sector subunit alpha) [Candidatus Glomeribacter
gigasporarum BEG34]
gi|347816803|emb|CCD29043.1| ATP synthase subunit alpha (ATPase subunit alpha) (ATP synthase F1
sector subunit alpha) [Candidatus Glomeribacter
gigasporarum BEG34]
Length = 511
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 230/405 (56%), Positives = 316/405 (78%), Gaps = 2/405 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + ++++G CT +I E+PVG EL+GR+VN+ G+ ID K K + +EKI
Sbjct: 73 AVILGEYTSISEGDPVKCTGRILEVPVGPELIGRVVNALGQPIDGKGPIHAKQSDAIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV+EP+ TG+K+IDSM+PIG+GQRELIIGDRQTGKT +A+DTII+QK K++I
Sbjct: 133 APGVIWRKSVSEPVQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAVAVDTIIHQKGKDLI 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS++NV+ KL+ + +DYT+VVAA+A+D AA QYI+PY GCT+GEYFRD
Sbjct: 193 CIYVAIGQKASSMMNVVRKLEEHGALDYTIVVAASASDPAAMQYIAPYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G D LI+YDDLT+ AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++++ ++E+
Sbjct: 253 GADALIVYDDLTRQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVSEDYVERF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K +G+LTA P+IET GDVT+F+PTNVISITDGQIFL+T+LFN+ RPA+N G+
Sbjct: 313 TKGAVMGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFLETDLFNAGIRPAMNAGV 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKLSG IR LAQY EL +F++FSSDLD T+ QL G++++ L+K
Sbjct: 373 SVSRVGGAAQTKIIKKLSGGIRTDLAQYCELAAFAQFSSDLDNATRKQLERGQRLTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRI 570
Q ++ + EL + L + + +P+ ++ FE + ++ +
Sbjct: 433 QPQYQPLQVWELAVSLFAANHAYLDDVPVAEVLDFEKELREHLSM 477
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 140/310 (45%), Gaps = 22/310 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I V TG+ + PVG +GR++N LG PID KG I++K+ I
Sbjct: 71 VEAVILGEYTSISEGDPVKCTGRILEVPVGPELIGRVVNALGQPIDGKGPIHAKQSDAIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GKT ++ I I
Sbjct: 131 KIAPGVIWRKSVSEPVQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAVAVDTI----IHQ 186
Query: 711 KG---CSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG +++ +G+++ + +++E LD ++ ++P+ + G ++
Sbjct: 187 KGKDLICIYVAIGQKASSMMNVVRKLEEHGALDYTIVVAASASDPAAMQYIAPYAGCTMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G D L+ D++ R A ++S +L R P Y + +L ER +
Sbjct: 247 EYFRDRGADALIVYDDLTRQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVSE 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K+G++T++ I A D+T P+ + D I L + GI P
Sbjct: 307 DYVERFTKGAVMGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFLETDLFNAGIRP 366
Query: 873 AIDPLESYSK 882
A++ S S+
Sbjct: 367 AMNAGVSVSR 376
>gi|112791360|gb|ABI21950.1| ATP synthase beta subunit, partial [Serratia marcescens]
Length = 421
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G ++G++R V + PI PVG TLGRI+NVLG PID KG+
Sbjct: 17 EVQQQLGGGVVRCIAMGTSDGLRRGLKVNNLDHPIEVPVGKATLGRIMNVLGQPIDMKGD 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKV+DL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRAAPSYEELSSSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNVLDKVSL+YGQMNEP GNRLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 317 SRQLDPLVVGQEHYDVARGVQSILQRYQELKD 348
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K + E+PVG LGRI+N G+ ID K + R + + AP +
Sbjct: 37 GLRRGLKVNNLDHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK +D + P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 SSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 217 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 264 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPL 323
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 324 VVGQEHYDVARG----VQSILQRYQELK 347
>gi|34500006|gb|AAQ73585.1| ATP synthase beta subunit [Pasteurella aerogenes]
Length = 444
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/356 (67%), Positives = 290/356 (81%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + + + + +++ +++ +VQQQ+G +VR IA G+++G+KR V +TG PI
Sbjct: 16 VEFPQDAVPRVYDALKVESGLTL-EVQQQLGGGVVRCIALGSSDGLKRGLKVENTGNPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID KG I ++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEKGPIGAEDAWAIHRAAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRV LTGL++AE+FR+ G+DVL F+DNIYR+TLA TEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVPLTGLTMAEKFRDEGRDVLFFVDNIYRYTLAVTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIYPA+ P+ S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYPAVGPIRFTSRQLDPLVVGQEHYDVARGVQGILQRYKELKD 370
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T +PVG + LGRI+N GE ID K ++ + + AP ++
Sbjct: 59 GLKRGLKVENTGNPISVPVGTKTLGRIMNVLGEPIDEKGPIGAEDAWAIHRAAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + P TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVPLTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAVTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA+ SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVGPIRFTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 346 VVGQEHYDVARGVQG----ILQRYKELK 369
>gi|372487539|ref|YP_005027104.1| ATP synthase, F1 beta subunit [Dechlorosoma suillum PS]
gi|359354092|gb|AEV25263.1| ATP synthase, F1 beta subunit [Dechlorosoma suillum PS]
Length = 467
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G+++G++R V +TGKPI PVG TLGRI++VLG PID G
Sbjct: 48 EVQQQLGDGIVRTIALGSSDGLRRGMKVNNTGKPISVPVGHGTLGRIMDVLGRPIDEAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S + IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IASDETRAIHQKAPAFDELSPSVELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLA+EMG+LQE
Sbjct: 228 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGRLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP IVGEEHY VA V+ LQ+YKEL+D
Sbjct: 348 SRQLDPQIVGEEHYNVARGVQMTLQRYKELRD 379
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 136/327 (41%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T K +PVG LGRI++ G ID + + AP +
Sbjct: 68 GLRRGMKVNNTGKPISVPVGHGTLGRIMDVLGRPIDEAGPIASDETRAIHQKAPAFDELS 127
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 128 PSVELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 187
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 188 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 247
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + RL ER I +
Sbjct: 248 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGRLQER-------------ITSTKV 294
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 295 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQ 354
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
+ G Y + + +++ L +Y+EL
Sbjct: 355 IVGEEHYNVARG----VQMTLQRYKEL 377
>gi|407715185|ref|YP_006835750.1| F-type H+-transporting ATPase subunit beta [Burkholderia
phenoliruptrix BR3459a]
gi|407237369|gb|AFT87568.1| F-type H+-transporting ATPase subunit beta [Burkholderia
phenoliruptrix BR3459a]
Length = 459
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/356 (67%), Positives = 287/356 (80%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + L+ + +VQQQ+G+ +VRTI G ++G++R T+V +TGKPI
Sbjct: 16 VEFPRSDMPKVYDALILEGSELTLEVQQQLGDGVVRTICLGASDGLRRGTVVKNTGKPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G I S IH P F + +LETGIKVIDL+
Sbjct: 76 VPVGKPTLGRIMDVLGRPIDEAGPIASDNMRSIHQKAPAFDELSPSTELLETGIKVIDLI 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA
Sbjct: 196 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMGKLQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGKLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 316 ATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRGVQQTLQRYKELRD 371
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 137/327 (41%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID N ++ + AP +
Sbjct: 60 GLRRGTVVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPIASDNMRSIHQKAPAFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 120 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 240 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPN 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y I + ++ L +Y+EL
Sbjct: 347 VIGEEHYSITRG----VQQTLQRYKEL 369
>gi|334132530|ref|ZP_08506287.1| ATP synthase alpha subunit [Methyloversatilis universalis FAM5]
gi|333442496|gb|EGK70466.1| ATP synthase alpha subunit [Methyloversatilis universalis FAM5]
Length = 512
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/418 (55%), Positives = 319/418 (76%), Gaps = 4/418 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++++GQ CT +I E+PVG EL+GR+VN+ G+ ID K K + VEK+
Sbjct: 73 AVVLGDYEHISEGQTVKCTGRILEVPVGPELIGRVVNALGQPIDGKGPINAKLTDKVEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KSIDSM+P+G+GQRELIIGDRQTGKT +A+D IINQK +N+
Sbjct: 133 APGVIARQSVSQPVQTGLKSIDSMVPVGRGQRELIIGDRQTGKTAVAVDAIINQKGQNMT 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK S++ NV+ KL+ Y M+YT+VVAATA+DSAA Q+++PY GCT+GEYFRD
Sbjct: 193 CIYVAVGQKASTIANVVRKLEEYGAMEYTIVVAATASDSAAMQFLAPYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 253 GEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNPDYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGV 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G +R+ LAQYREL +F++F+SDLD T+ QL G +++ LMK
Sbjct: 373 SVSRVGGAAQTKIIKKLGGGVRLALAQYRELAAFAQFASDLDEATRKQLERGRRVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF--RIINLKNNISINK 581
Q + S+ ++ I L N +F + + ++ FE + ++ + +L N I +K
Sbjct: 433 QPQYSPLSVAQMGISLYAANNGYFDDVEVSRVLAFESALHQFLQQKYSDLMNKIESSK 490
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 154/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ I V TG+ + PVG +GR++N LG PID KG IN+K +
Sbjct: 71 VGAVVLGDYEHISEGQTVKCTGRILEVPVGPELIGRVVNALGQPIDGKGPINAKLTDKVE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GKT ++ I N ++
Sbjct: 131 KVAPGVIARQSVSQPVQTGLKSIDSMVPVGRGQRELIIGDRQTGKTAVAVDAIINQKGQN 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ VG+++ + +++E ++ ++ ++ + + G ++ E F
Sbjct: 191 MTC-IYVAVGQKASTIANVVRKLEEYGAMEYTIVVAATASDSAAMQFLAPYAGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + +A ++S +L R P Y + +L ER +
Sbjct: 250 RDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNPDYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 310 EKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G K+ + V+ L +Y+EL
Sbjct: 370 AGVSVSR-----VGGAAQTKIIKKLGGGVRLALAQYREL 403
>gi|34499998|gb|AAQ73581.1| ATP synthase beta subunit [Mannheimia sp. P373]
Length = 444
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 240/356 (67%), Positives = 291/356 (81%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + +++ +++ +VQQQ+G +VR IA G+++G+KR V +T K I
Sbjct: 16 VEFPQDAVPKVYDALKVESGLTL-EVQQQLGGGVVRCIALGSSDGLKRGLKVENTNKAIE 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID G I +++ IH P + Q + LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEAGPIGEEERWTIHRAAPSYEEQANSTEFLETGIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
PF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 PPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPT AEEMG LQERI+STK G+ITSVQA+YVPADDLT+PSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTFAEEMGVLQERITSTKTGSITSVQAVYVPADDLTEPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKD 370
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 147/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T K E+PVG + LGRI+N GE ID + R T+ + AP ++
Sbjct: 59 GLKRGLKVENTNKAIEVPVGTKTLGRIMNVLGEPIDEAGPIGEEERWTIHRAAPSYEEQA 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTEFLETGIKVIDLVPPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTFAEEMGVLQERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTEPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G L +Y+EL+
Sbjct: 346 VVGEEHYNVARGVQG----TLQRYKELK 369
>gi|374365867|ref|ZP_09623953.1| F0F1 ATP synthase subunit beta [Cupriavidus basilensis OR16]
gi|373102521|gb|EHP43556.1| F0F1 ATP synthase subunit beta [Cupriavidus basilensis OR16]
Length = 467
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG PI PVG TLGRI++VLG PID G
Sbjct: 48 EVQQQLGDGVVRTIALGSSDGLRRGMAVKGTGAPISVPVGHGTLGRIMDVLGRPIDEAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S + IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IASDELRSIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
L+GL++AE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LSGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA V+ LQ+YKEL+D
Sbjct: 348 SRQLDPQVVGQEHYDVARRVQQTLQRYKELRD 379
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 147/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID ++ + AP +
Sbjct: 68 GLRRGMAVKGTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIASDELRSIHQKAPKFDELS 127
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 128 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 187
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + +G T+ E FRD G+D L
Sbjct: 188 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALSGLTMAEKFRDEGRDILFF 247
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 248 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 294
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 295 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQ 354
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y + ++ ++ L +Y+EL +L K + KI + Q
Sbjct: 355 VVGQEHYDVARR----VQQTLQRYKELRDIIAILGMDELSPEDKQSVSRARKIQRFLSQP 410
Query: 528 PH 529
H
Sbjct: 411 FH 412
>gi|307731459|ref|YP_003908683.1| ATP synthase F1 subunit beta [Burkholderia sp. CCGE1003]
gi|323527841|ref|YP_004229994.1| ATP synthase F1 subunit beta [Burkholderia sp. CCGE1001]
gi|307585994|gb|ADN59392.1| ATP synthase F1, beta subunit [Burkholderia sp. CCGE1003]
gi|323384843|gb|ADX56934.1| ATP synthase F1, beta subunit [Burkholderia sp. CCGE1001]
Length = 464
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/356 (67%), Positives = 287/356 (80%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + L+ + +VQQQ+G+ +VRTI G ++G++R T+V +TGKPI
Sbjct: 21 VEFPRSDMPKVYDALILEGSELTLEVQQQLGDGVVRTICLGASDGLRRGTVVKNTGKPIS 80
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G I S IH P F + +LETGIKVIDL+
Sbjct: 81 VPVGKPTLGRIMDVLGRPIDEAGPIASDNMRSIHQKAPAFDELSPSTELLETGIKVIDLI 140
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 141 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 200
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA
Sbjct: 201 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSA 260
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMGKLQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 261 LLGRMPSAVGYQPTLAEEMGKLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLD 320
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 321 ATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRGVQQTLQRYKELRD 376
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 137/327 (41%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID N ++ + AP +
Sbjct: 65 GLRRGTVVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPIASDNMRSIHQKAPAFDELS 124
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 125 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 184
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 185 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 244
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 245 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 291
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 292 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPN 351
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y I + ++ L +Y+EL
Sbjct: 352 VIGEEHYSITRG----VQQTLQRYKEL 374
>gi|119776776|ref|YP_929516.1| F0F1 ATP synthase subunit beta [Shewanella amazonensis SB2B]
gi|166222412|sp|A1SBU0.1|ATPB_SHEAM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|119769276|gb|ABM01847.1| Sodium-transporting two-sector ATPase [Shewanella amazonensis SB2B]
Length = 462
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 278/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VRTIA G+++G++R V +TG I PVG TLGRI+NVLG+P+D G
Sbjct: 44 EVQQQLGGGVVRTIAMGSSDGLRRGIEVENTGSAIAVPVGKATLGRIMNVLGEPVDEAGP 103
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + + IH P + Q +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 104 IGEEDRYVIHRAAPSYEEQSNTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 163
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFY+EM ES VLDKV+++YGQMNEP GNRLRVA
Sbjct: 164 ELINNIAKAHSGLSVFAGVGERTREGNDFYYEMMESGVLDKVAMVYGQMNEPPGNRLRVA 223
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ GKDVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 224 LTGLTMAEKFRDEGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 283
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S
Sbjct: 284 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDST 343
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VAN V+ LQ+YKELKD
Sbjct: 344 SRQLDPLVVGQEHYDVANGVQNVLQRYKELKD 375
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG LGRI+N GE +D ++R + + AP ++
Sbjct: 64 GLRRGIEVENTGSAIAVPVGKATLGRIMNVLGEPVDEAGPIGEEDRYVIHRAAPSYEEQS 123
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 124 NTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 183
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++ +D +V + + TG T+ E FRD G+D L+
Sbjct: 184 ERTREGNDFYYEMMESGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLLF 243
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 244 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 290
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 291 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 350
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 351 VVGQEHYDV----ANGVQNVLQRYKELK 374
>gi|440730149|ref|ZP_20910245.1| F0F1 ATP synthase subunit beta [Xanthomonas translucens DAR61454]
gi|440379520|gb|ELQ16113.1| F0F1 ATP synthase subunit beta [Xanthomonas translucens DAR61454]
Length = 468
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/362 (64%), Positives = 284/362 (78%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + ++ +VQQQ+G+ IVRTIA G+T+G+KRN + +TG+ I
Sbjct: 16 VEFARADVPKIYDALKVEGTAITLEVQQQLGDGIVRTIALGSTDGLKRNLLATNTGRAIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID GE+ + IH P + +Q +LETGIKVIDL+
Sbjct: 76 VPVGPGTLGRIMDVLGRPIDEAGEVQATDHWEIHRAAPSYEDQSSATELLETGIKVIDLM 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHAGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
NVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLF+DNIYR+TLA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLA 255
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADD TDPSP+T
Sbjct: 256 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDYTDPSPAT 315
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLDST+ LSR IA LGIYPA+DPL+S S+ +DP ++G EHY A V+ LQKYKEL
Sbjct: 316 TFAHLDSTVALSRSIASLGIYPAVDPLDSTSRMMDPNVIGHEHYDTARRVQMTLQKYKEL 375
Query: 911 KD 912
KD
Sbjct: 376 KD 377
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 29/324 (8%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T + +PVG LGRI++ G ID + + + + AP D+ S E L TGI
Sbjct: 70 TGRAISVPVGPGTLGRIMDVLGRPIDEAGEVQATDHWEIHRAAPSYEDQSSATELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N K + ++ +G++ +
Sbjct: 130 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHAGLSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDL 358
+++K N +D +V + + TG T+ EYFRD G+D L+ D++
Sbjct: 190 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNI 249
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P V Y L E + +++I + G++T
Sbjct: 250 YRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKTGSIT 296
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D T P + D + L ++ + PA++ S SR V G
Sbjct: 297 SIQAVYVPADDYTDPSPATTFAHLDSTVALSRSIASLGIYPAVDPLDSTSRMMDPNVIGH 356
Query: 474 AQYKIVKKLSGDIRIMLAQYRELE 497
Y ++ +++ L +Y+EL+
Sbjct: 357 EHYDTARR----VQMTLQKYKELK 376
>gi|424796352|ref|ZP_18222092.1| ATP synthase beta chain [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|433677064|ref|ZP_20509095.1| F0F1 ATP synthase subunit beta [Xanthomonas translucens pv.
translucens DSM 18974]
gi|422794993|gb|EKU23766.1| ATP synthase beta chain [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|430817812|emb|CCP39450.1| F0F1 ATP synthase subunit beta [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 468
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/362 (64%), Positives = 284/362 (78%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + ++ +VQQQ+G+ IVRTIA G+T+G+KRN + +TG+ I
Sbjct: 16 VEFARADVPKIYDALKVEGTAITLEVQQQLGDGIVRTIALGSTDGLKRNLLATNTGRAIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID GE+ + IH P + +Q +LETGIKVIDL+
Sbjct: 76 VPVGPGTLGRIMDVLGRPIDEAGEVQATDHWEIHRAAPSYEDQSSATELLETGIKVIDLM 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHAGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
NVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLF+DNIYR+TLA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLA 255
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADD TDPSP+T
Sbjct: 256 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDYTDPSPAT 315
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLDST+ LSR IA LGIYPA+DPL+S S+ +DP ++G EHY A V+ LQKYKEL
Sbjct: 316 TFAHLDSTVALSRSIASLGIYPAVDPLDSTSRMMDPNVIGHEHYDTARRVQMTLQKYKEL 375
Query: 911 KD 912
KD
Sbjct: 376 KD 377
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 29/324 (8%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T + +PVG LGRI++ G ID + + + + AP D+ S E L TGI
Sbjct: 70 TGRAISVPVGPGTLGRIMDVLGRPIDEAGEVQATDHWEIHRAAPSYEDQSSATELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N K + ++ +G++ +
Sbjct: 130 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHAGLSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDL 358
+++K N +D +V + + TG T+ EYFRD G+D L+ D++
Sbjct: 190 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNI 249
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P V Y L E + +++I + G++T
Sbjct: 250 YRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKTGSIT 296
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D T P + D + L ++ + PA++ S SR V G
Sbjct: 297 SIQAVYVPADDYTDPSPATTFAHLDSTVALSRSIASLGIYPAVDPLDSTSRMMDPNVIGH 356
Query: 474 AQYKIVKKLSGDIRIMLAQYRELE 497
Y ++ +++ L +Y+EL+
Sbjct: 357 EHYDTARR----VQMTLQKYKELK 376
>gi|345873442|ref|ZP_08825352.1| ATP synthase subunit beta [Thiorhodococcus drewsii AZ1]
gi|343917201|gb|EGV28009.1| ATP synthase subunit beta [Thiorhodococcus drewsii AZ1]
Length = 460
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 277/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VR IA G T+G++R V TG PI PVG TLGRI++VLG+ ID +GE
Sbjct: 40 EVQQQLGDGVVRCIAMGTTDGLQRGVDVTATGAPIQVPVGQATLGRIMDVLGNAIDEQGE 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ S+ + IH PK +Q + ILETGIKVIDL+ P KGGK+GLFGGAGVGKTV +M
Sbjct: 100 VESEARWSIHRSAPKLEDQAASTEILETGIKVIDLIMPISKGGKVGLFGGAGVGKTVTLM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA+EH G SVF GVGER+REGNDFYHEMKESNVL+KV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAVEHSGFSVFAGVGERTREGNDFYHEMKESNVLEKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR G+DVL+FIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLA EMG LQE
Sbjct: 220 LTGLTMAEYFREEGRDVLMFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+ST+ G+ITS QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELGIYPA+DPL+S
Sbjct: 280 RITSTRTGSITSFQAVYVPADDLTDPSPATTFAHLDATLVLSRQIAELGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+ LDP +VG EHY+ A V+ LQ+YKELKD
Sbjct: 340 SRILDPNVVGSEHYETARAVQGTLQRYKELKD 371
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 146/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T ++PVG LGRI++ G ID + + + R ++ + AP + D+
Sbjct: 60 GLQRGVDVTATGAPIQVPVGQATLGRIMDVLGNAIDEQGEVESEARWSIHRSAPKLEDQA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID ++PI KG + + G GKT ++ I N + ++ +G
Sbjct: 120 ASTEILETGIKVIDLIMPISKGGKVGLFGGAGVGKTVTLMELIRNIAVEHSGFSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N ++ +V + + TG T+ EYFR+ G+D L+
Sbjct: 180 ERTREGNDFYHEMKESNVLEKVALVYGQMNEPPGNRLRVALTGLTMAEYFREEGRDVLMF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + L ER I +
Sbjct: 240 IDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQER-------------ITSTRT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+F + D+T P + D + L + PA++ S SR
Sbjct: 287 GSITSFQAVYVPADDLTDPSPATTFAHLDATLVLSRQIAELGIYPAVDPLDSTSRILDPN 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G+ Y+ + + G L +Y+EL+
Sbjct: 347 VVGSEHYETARAVQG----TLQRYKELK 370
>gi|148975564|ref|ZP_01812435.1| F0F1 ATP synthase subunit beta [Vibrionales bacterium SWAT-3]
gi|145964992|gb|EDK30243.1| F0F1 ATP synthase subunit beta [Vibrionales bacterium SWAT-3]
Length = 461
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 278/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G NIVR IA G ++G++R V +TG PI PVG+ TLGRI+NVLG PID GE
Sbjct: 43 EVQQQLGGNIVRCIAMGTSDGLRRGLTVENTGSPITVPVGEETLGRIMNVLGQPIDECGE 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I K+ IH P + + + +LETG+KVIDL+CPF KGGKIGLFGGAGVGKTVNMM
Sbjct: 103 IGQKENYEIHREAPSYEEKANSTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFY+EMKE+ VLDKV+++YGQMNEP GNRLRVA
Sbjct: 163 ELINNIAKAHSGLSVFTGVGERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LG+YPAIDPL+S
Sbjct: 283 RITSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP IVG+EHY +A V+ LQ+YKELKD
Sbjct: 343 SRQLDPLIVGQEHYDIAQTVQTTLQRYKELKD 374
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 146/346 (42%), Gaps = 25/346 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG E LGRI+N G+ ID + K + + AP ++ + E L TG+K ID +
Sbjct: 79 VPVGEETLGRIMNVLGQPIDECGEIGQKENYEIHREAPSYEEKANSTELLETGVKVIDLI 138
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K + + ++ +G++ + ++K
Sbjct: 139 CPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTGVGERTREGNDFYYEMKEA 198
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
+D +V + + TG T+ E FRD G+D L+ D++ ++ A ++S
Sbjct: 199 GVLDKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSA 258
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P + L E + +++I + G++T+ + D+
Sbjct: 259 LLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKQGSITSIQAVYVPADDL 305
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P + D + L N+ PAI+ S SR + G Y I +
Sbjct: 306 TDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPLIVGQEHYDIAQT---- 361
Query: 486 IRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
++ L +Y+EL+ +L K + KI + Q H
Sbjct: 362 VQTTLQRYKELKDIIAILGMDELSTEDKQVVSRARKIERFLTQPYH 407
>gi|437999752|ref|YP_007183485.1| ATP synthase alpha chain [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|429338986|gb|AFZ83408.1| ATP synthase alpha chain [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
Length = 495
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/403 (58%), Positives = 311/403 (77%), Gaps = 2/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++G T +I E+PVG+ L GR+VN+ GE ID + + +EK+
Sbjct: 55 AVVLGDYTGISEGDIVRTTGRILEVPVGYGLRGRVVNALGEPIDGRGSIKHDATDIIEKV 114
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR +V++PL TGIKSIDSM+PIG+GQRELIIGDRQTGKT++AIDTIINQKN V
Sbjct: 115 APGVIDRRTVSQPLQTGIKSIDSMVPIGRGQRELIIGDRQTGKTSVAIDTIINQKNSGVT 174
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK +S+ NV+ KL+ Y ++YT++VAATA+DSAA QYI+PY+GCT+GEYFRD
Sbjct: 175 CIYVAIGQKAASINNVVRKLEEYGALEYTIIVAATASDSAAMQYIAPYSGCTMGEYFRDR 234
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQISLLL+RPPGREA+PGDVFYLHSRLLERS+++++ ++EK
Sbjct: 235 GEDALIVYDDLTKQAWAYRQISLLLKRPPGREAYPGDVFYLHSRLLERSARVSENYVEKF 294
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K + G+LT+ PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 295 TKGVVKNKTGSLTSLPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGI 354
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGG+AQ KI+KKLSG IR LAQYREL +FS+FSSDLD T+ QL G+++ L+K
Sbjct: 355 SVSRVGGSAQTKIIKKLSGGIRTDLAQYRELAAFSQFSSDLDEATRRQLDRGKRVVELLK 414
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
Q ++ + E ++L + F + + I LFE I +F
Sbjct: 415 QAQYQPLKVWEQALLLFSLNRGFMDDVNVSDIALFERFIKDFF 457
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 153/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ GI IV TG+ + PVG GR++N LG+PID +G I I
Sbjct: 53 VGAVVLGDYTGISEGDIVRTTGRILEVPVGYGLRGRVVNALGEPIDGRGSIKHDATDIIE 112
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P ++ + L+TGIK ID + P +G + + G GKT ++ I N
Sbjct: 113 KVAPGVIDRRTVSQPLQTGIKSIDSMVPIGRGQRELIIGDRQTGKTSVAIDTIINQKNSG 172
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ N+ +++E L+ ++ ++ + + +G ++ E F
Sbjct: 173 VTC-IYVAIGQKAASINNVVRKLEEYGALEYTIIVAATASDSAAMQYIAPYSGCTMGEYF 231
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY-------QPTLAEEMGKLQER-- 821
R+ G+D L+ D++ + A ++S +L R P Y L E ++ E
Sbjct: 232 RDRGEDALIVYDDLTKQAWAYRQISLLLKRPPGREAYPGDVFYLHSRLLERSARVSENYV 291
Query: 822 ------ISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
+ K G++TS+ I A D++ P+ + D I L + GI PAI+
Sbjct: 292 EKFTKGVVKNKTGSLTSLPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAIN 351
Query: 876 PLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
S S+ + G K+ + ++ L +Y+EL
Sbjct: 352 AGISVSR-----VGGSAQTKIIKKLSGGIRTDLAQYREL 385
>gi|126667608|ref|ZP_01738577.1| F0F1 ATP synthase subunit beta [Marinobacter sp. ELB17]
gi|126627877|gb|EAZ98505.1| F0F1 ATP synthase subunit beta [Marinobacter sp. ELB17]
Length = 464
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 284/332 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR +T KPI PVG TLGRI++VLG PID +G
Sbjct: 40 EVQQQLGDGVVRTIAMGSTEGLKRGLKAENTHKPISVPVGTKTLGRIMDVLGRPIDEQGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++ IH P +++Q + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEELWAIHRKAPGYADQAASADLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFY+EMK+SNVLDKV+++YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKEHSGLSVFAGVGERTREGNDFYYEMKDSNVLDKVAMVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL+IAE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLA+EMG+LQE
Sbjct: 220 LTGLTIAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAQEMGELQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK+G+ITS+QA+YVPADDLTDPSP+TTF+HLD+T+VLSR IA GIYPAIDPL+S
Sbjct: 280 RITSTKSGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRDIASKGIYPAIDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP ++GE+HY VA V+ LQ+YKELKD
Sbjct: 340 SRQLDPLVIGEQHYAVARGVQNVLQRYKELKD 371
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 145/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G K T K +PVG + LGRI++ G ID + + + + APG D+
Sbjct: 59 EGLKRGLKAENTHKPISVPVGTKTLGRIMDVLGRPIDEQGPIGEEELWAIHRKAPGYADQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ + L TGIK ID + P KG + + G GKT ++ I N K + + ++ +
Sbjct: 119 AASADLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + ++K N +D +V + + TG TI E FRD G+D L
Sbjct: 179 GERTREGNDFYYEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLF 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P + + L ER I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAQEMGELQER-------------ITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
+G++T+ + D+T P S D + L ++ + PAI+ S SR
Sbjct: 286 SGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRDIASKGIYPAIDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 346 LVIGEQHYAVARG----VQNVLQRYKELK 370
>gi|113869573|ref|YP_728062.1| F0F1 ATP synthase subunit beta [Ralstonia eutropha H16]
gi|123328788|sp|Q0K5M7.1|ATPB_RALEH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|113528349|emb|CAJ94694.1| Membrane-bound ATP synthase, F1 sector,beta-subunit [Ralstonia
eutropha H16]
Length = 467
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG PI PVG TLGRI++VLG PID G
Sbjct: 48 EVQQQLGDGVVRTIALGSSDGLRRGMEVKSTGAPISVPVGHGTLGRIMDVLGRPIDEAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S + IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IASDELRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG EHY+VA V+ LQ+YKEL+D
Sbjct: 348 SRQLDPQVVGTEHYEVARRVQQTLQRYKELRD 379
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 139/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG LGRI++ G ID + + AP +
Sbjct: 68 GLRRGMEVKSTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIASDELRAIHQKAPKFDELS 127
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 128 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 187
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 188 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 247
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 248 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 294
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 295 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQ 354
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y++ ++ ++ L +Y+EL
Sbjct: 355 VVGTEHYEVARR----VQQTLQRYKEL 377
>gi|268685732|ref|ZP_06152594.1| ATP synthase subunit beta [Neisseria gonorrhoeae SK-93-1035]
gi|268626016|gb|EEZ58416.1| ATP synthase subunit beta [Neisseria gonorrhoeae SK-93-1035]
Length = 465
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/365 (65%), Positives = 287/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + + L N +VQQ +G+ +VRTIA G+++G+KR V DTG
Sbjct: 13 VVDVEFPRDMIPRVYDALKLDENGLTLEVQQLLGDGVVRTIAMGSSDGLKRGMTVSDTGS 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG PID G I++ K IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKGTLGRIVDVLGTPIDEAGPIDTDKSRAIHQAAPKFDELSSTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFSGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 151/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRIV+ G ID + + AP +
Sbjct: 60 GLKRGMTVSDTGSPITVPVGKGTLGRIVDVLGTPIDEAGPIDTDKSRAIHQAAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 STTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFSGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLAVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|33519491|ref|NP_878323.1| ATP synthase F0F1 subunit beta [Candidatus Blochmannia floridanus]
gi|81666731|sp|Q7VQV6.1|ATPB_BLOFL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|33517154|emb|CAD83536.1| ATP synthase beta subunit [Candidatus Blochmannia floridanus]
Length = 464
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/338 (72%), Positives = 283/338 (83%)
Query: 575 NNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDP 634
+ + I +V QQ+G +IVR IA G+TNG+KR V + I PVG TLGR+++VLG+P
Sbjct: 40 HQVLILEVVQQLGRSIVRCIAMGSTNGLKRGLDVTNLKHGIQVPVGKETLGRVMDVLGNP 99
Query: 635 IDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVG 694
ID KG INS +K IH P + N +L TGIKVIDL+CPF+KGGKIGLFGGAGVG
Sbjct: 100 IDMKGPINSIEKWSIHRSAPLYEELSSNQELLITGIKVIDLMCPFIKGGKIGLFGGAGVG 159
Query: 695 KTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSG 754
KTVN+MELIRNIAIEH G SVF+GVGER REGNDFYHEM S +LDKV+L+YGQMNEP G
Sbjct: 160 KTVNIMELIRNIAIEHAGYSVFVGVGERIREGNDFYHEMIHSGILDKVALVYGQMNEPPG 219
Query: 755 NRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
NRLRVALTGL+IAE+FR+ G DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQ TL+EE
Sbjct: 220 NRLRVALTGLTIAEKFRDEGHDVLLFIDNIYRYTLAGTEVSALLGRVPSAVGYQSTLSEE 279
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG LQERI+STK+G+ITSVQAIYVPADDLTDPSP+TTF HLD+TIVLSRQIA LGIYPA+
Sbjct: 280 MGMLQERIASTKSGSITSVQAIYVPADDLTDPSPTTTFAHLDATIVLSRQIAALGIYPAV 339
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+SYSKQLDP IVG+EHY +AN VK LQ+Y+ELKD
Sbjct: 340 DPLDSYSKQLDPCIVGQEHYDIANNVKSILQRYQELKD 377
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 149/331 (45%), Gaps = 32/331 (9%)
Query: 173 DLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIM 232
D+ NL G ++PVG E LGR+++ G ID K + ++ + AP
Sbjct: 72 DVTNLKHG---------IQVPVGKETLGRVMDVLGNPIDMKGPINSIEKWSIHRSAPLYE 122
Query: 233 DRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYV 291
+ S E L+TGIK ID M P KG + + G GKT ++ I N ++ ++V
Sbjct: 123 ELSSNQELLITGIKVIDLMCPFIKGGKIGLFGGAGVGKTVNIMELIRNIAIEHAGYSVFV 182
Query: 292 CIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDC 351
+G++I + +++ + +D +V + + TG TI E FRD G D
Sbjct: 183 GVGERIREGNDFYHEMIHSGILDKVALVYGQMNEPPGNRLRVALTGLTIAEKFRDEGHDV 242
Query: 352 LIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFN 411
L+ D++ ++ A ++S LL R P + +S+ + + +++I +
Sbjct: 243 LLFIDNIYRYTLAGTEVSALLGRVPSAVGY-------------QSTLSEEMGMLQERIAS 289
Query: 412 KNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-- 469
+G++T+ I D+T PT + D I L + PA++ S S+
Sbjct: 290 TKSGSITSVQAIYVPADDLTDPSPTTTFAHLDATIVLSRQIAALGIYPAVDPLDSYSKQL 349
Query: 470 ---VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y I + +++ +L +Y+EL+
Sbjct: 350 DPCIVGQEHYDI----ANNVKSILQRYQELK 376
>gi|451936183|ref|YP_007460037.1| F-type H+-transporting ATPase subunit alpha [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777106|gb|AGF48081.1| F-type H+-transporting ATPase subunit alpha [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 513
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/403 (58%), Positives = 310/403 (76%), Gaps = 2/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++G T +I E+PVG+ L GR+VN+ GE ID + ++ + +EK+
Sbjct: 73 AVILGDYTGISEGDVVRTTGRILEVPVGYGLRGRVVNALGEPIDGRGSIKYESTDVIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR +V++PL TGIKSIDSM+PIG+GQRELIIGDRQTGKT++AIDTIINQKN V
Sbjct: 133 APGVIDRHTVSQPLQTGIKSIDSMVPIGRGQRELIIGDRQTGKTSVAIDTIINQKNSGVT 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK +S+ NV+ KL+ + + YT++VAATA+DSAA QYI+PY GCT+GEYFRD
Sbjct: 193 CIYVAIGQKAASINNVVRKLEEHGALAYTIIVAATASDSAAMQYIAPYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQISLLL+RPPGREA+PGDVFYLHSRLLER++++++ ++EK
Sbjct: 253 GEDALIVYDDLTKQAWAYRQISLLLKRPPGREAYPGDVFYLHSRLLERAARVSESYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
I G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TNGIVKNKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGVRPAINAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKLSG IR LAQYREL +FS+FSSDLD T+ QL G+++ L+K
Sbjct: 373 SVSRVGGAAQTKIIKKLSGGIRTDLAQYRELAAFSQFSSDLDEATRRQLDRGKRVVELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
Q + + E ++L + F + ++ I LFEI I +
Sbjct: 433 QPQYHPLKVWEQAVLLFSLNRGFMDDVNVQDINLFEIFIKDFL 475
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 152/339 (44%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ GI +V TG+ + PVG GR++N LG+PID +G I + I
Sbjct: 71 VGAVILGDYTGISEGDVVRTTGRILEVPVGYGLRGRVVNALGEPIDGRGSIKYESTDVIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P ++ + L+TGIK ID + P +G + + G GKT ++ I N
Sbjct: 131 KVAPGVIDRHTVSQPLQTGIKSIDSMVPIGRGQRELIIGDRQTGKTSVAIDTIINQKNSG 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ N+ +++E L ++ ++ + + G ++ E F
Sbjct: 191 VTC-IYVAIGQKAASINNVVRKLEEHGALAYTIIVAATASDSAAMQYIAPYAGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY-------QPTLAEEMGKLQER-- 821
R+ G+D L+ D++ + A ++S +L R P Y L E ++ E
Sbjct: 250 RDRGEDALIVYDDLTKQAWAYRQISLLLKRPPGREAYPGDVFYLHSRLLERAARVSESYV 309
Query: 822 ------ISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
I K G++T++ I A D++ P+ + D I L + G+ PAI+
Sbjct: 310 EKFTNGIVKNKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGVRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
S S+ + G K+ + ++ L +Y+EL
Sbjct: 370 AGISVSR-----VGGAAQTKIIKKLSGGIRTDLAQYREL 403
>gi|84385785|ref|ZP_00988815.1| ATP synthase subunit B [Vibrio splendidus 12B01]
gi|86145156|ref|ZP_01063487.1| ATP synthase subunit B [Vibrio sp. MED222]
gi|407068149|ref|ZP_11098987.1| F0F1 ATP synthase subunit beta [Vibrio cyclitrophicus ZF14]
gi|84379101|gb|EAP95954.1| ATP synthase subunit B [Vibrio splendidus 12B01]
gi|85836733|gb|EAQ54853.1| ATP synthase subunit B [Vibrio sp. MED222]
Length = 461
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +IVR IA G ++G++R V +TG PI PVG+ TLGRI+NVLG PID GE
Sbjct: 43 EVQQQLGGSIVRCIAMGTSDGLRRGLTVENTGSPITVPVGEETLGRIMNVLGQPIDECGE 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I K+ IH P + Q + +LETG+KVIDL+CPF KGGKIGLFGGAGVGKTVNMM
Sbjct: 103 IGQKESYEIHREAPSYEEQANSTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFY+EMKE+ VLDKV+++YGQMNEP GNRLRVA
Sbjct: 163 ELINNIAKAHSGLSVFTGVGERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+ST+ G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LG+YPAIDPL+S
Sbjct: 283 RITSTRQGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY +A +V+ LQ+YKELKD
Sbjct: 343 SRQLDPLVVGQEHYDIAQKVQTTLQRYKELKD 374
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 148/346 (42%), Gaps = 25/346 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG E LGRI+N G+ ID + K + + AP ++ + E L TG+K ID +
Sbjct: 79 VPVGEETLGRIMNVLGQPIDECGEIGQKESYEIHREAPSYEEQANSTELLETGVKVIDLI 138
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K + + ++ +G++ + ++K
Sbjct: 139 CPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTGVGERTREGNDFYYEMKEA 198
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
+D +V + + TG T+ E FRD G+D L+ D++ ++ A ++S
Sbjct: 199 GVLDKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSA 258
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P V Y L E + +++I + G++T+ + D+
Sbjct: 259 LLGR------MPSAVGY-QPTLAEEMGVL------QERITSTRQGSITSIQAVYVPADDL 305
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P + D + L N+ PAI+ S SR V G Y I +K
Sbjct: 306 TDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPLVVGQEHYDIAQK---- 361
Query: 486 IRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
++ L +Y+EL+ +L K + KI + Q H
Sbjct: 362 VQTTLQRYKELKDIIAILGMDELSTEDKQTVSRARKIERFLTQPYH 407
>gi|170694320|ref|ZP_02885474.1| ATP synthase F1, beta subunit [Burkholderia graminis C4D1M]
gi|170140743|gb|EDT08917.1| ATP synthase F1, beta subunit [Burkholderia graminis C4D1M]
Length = 464
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/356 (67%), Positives = 287/356 (80%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + L+ + +VQQQ+G+ +VRTI G ++G++R T+V +TG PI
Sbjct: 21 VEFPRTDMPKIYDALILEGSELTLEVQQQLGDGVVRTICLGASDGLRRGTVVKNTGHPIS 80
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G INS IH P F + +LETGIKVIDL+
Sbjct: 81 VPVGKPTLGRIMDVLGRPIDEAGPINSDVVRGIHQKAPAFDELSPSTELLETGIKVIDLI 140
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 141 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 200
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA
Sbjct: 201 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSA 260
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMGKLQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 261 LLGRMPSAVGYQPTLAEEMGKLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLD 320
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 321 ATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRGVQQTLQRYKELRD 376
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 134/327 (40%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID + + AP +
Sbjct: 65 GLRRGTVVKNTGHPISVPVGKPTLGRIMDVLGRPIDEAGPINSDVVRGIHQKAPAFDELS 124
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 125 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 184
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 185 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 244
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 245 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 291
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 292 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPN 351
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y I + ++ L +Y+EL
Sbjct: 352 VIGEEHYSITRG----VQQTLQRYKEL 374
>gi|348589507|ref|YP_004873969.1| ATP synthase subunit beta [Taylorella asinigenitalis MCE3]
gi|347973411|gb|AEP35946.1| ATP synthase beta chain [Taylorella asinigenitalis MCE3]
Length = 467
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G+ R V T PI PVG+ TLGRI++VLG PID G
Sbjct: 49 EVQQQLGDGVVRTIALGSSDGLSRGMAVDRTNAPISVPVGNGTLGRIMDVLGRPIDEAGP 108
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++K IH PKF + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 109 IEHEEKRSIHQAAPKFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 168
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEM+ESNVLDKV++++GQMNEP GNRLRVA
Sbjct: 169 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVA 228
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+D+LLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 229 LTGLTMAEKFRDEGRDILLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 288
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 289 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIASLGIYPAVDPLDSS 348
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP++VGEEHY VA V+ LQ+YK+L+D
Sbjct: 349 SRQLDPHVVGEEHYTVARAVQQTLQRYKDLRD 380
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 142/327 (43%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G T +PVG LGRI++ G ID + + ++ + AP +
Sbjct: 69 GLSRGMAVDRTNAPISVPVGNGTLGRIMDVLGRPIDEAGPIEHEEKRSIHQAAPKFDELS 128
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 129 PSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 188
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 189 ERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILLF 248
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 249 IDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 295
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 296 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIASLGIYPAVDPLDSSSRQLDPH 355
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + + ++ L +Y++L
Sbjct: 356 VVGEEHYTVARA----VQQTLQRYKDL 378
>gi|260770079|ref|ZP_05879012.1| ATP synthase beta chain [Vibrio furnissii CIP 102972]
gi|375133421|ref|YP_005049829.1| F0F1 ATP synthase subunit beta [Vibrio furnissii NCTC 11218]
gi|260615417|gb|EEX40603.1| ATP synthase beta chain [Vibrio furnissii CIP 102972]
gi|315182596|gb|ADT89509.1| F0F1 ATP synthase subunit beta [Vibrio furnissii NCTC 11218]
Length = 460
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/338 (70%), Positives = 280/338 (82%)
Query: 575 NNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDP 634
N+ + +VQQQ+G IVR IA G+++G+KR TG PI PVG+ TLGRI+NVLGDP
Sbjct: 36 NSSLVLEVQQQMGGGIVRCIAMGSSDGLKRGIQCETTGGPITVPVGEKTLGRIMNVLGDP 95
Query: 635 IDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVG 694
ID G I + K IH P + Q + +LETGIKVIDL+CPF KGGKIGLFGGAGVG
Sbjct: 96 IDECGPIGEETKYGIHRAAPSYEEQANSTALLETGIKVIDLICPFSKGGKIGLFGGAGVG 155
Query: 695 KTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSG 754
KTVNMMELI NIA H G SVF GVGER+REGNDFY+EMKE+ VLDKV+++YGQMNEP G
Sbjct: 156 KTVNMMELINNIAKAHSGLSVFTGVGERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPG 215
Query: 755 NRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
NRLRVALTGL+IAE FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 216 NRLRVALTGLTIAERFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 275
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LG+YPAI
Sbjct: 276 MGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAI 335
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP IVG+EHY VA V+ LQ+YKELKD
Sbjct: 336 DPLDSTSRQLDPQIVGQEHYDVAQRVQMTLQRYKELKD 373
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 145/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G +C T +PVG + LGRI+N G+ ID + + + + AP ++
Sbjct: 62 GLKRGIQCETTGGPITVPVGEKTLGRIMNVLGDPIDECGPIGEETKYGIHRAAPSYEEQA 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 122 NSTALLETGIKVIDLICPFSKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + TG TI E FRD G+D L+
Sbjct: 182 ERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVALTGLTIAERFRDEGRDVLLF 241
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I + +
Sbjct: 242 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKS 288
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ PAI+ S SR
Sbjct: 289 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPQ 348
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + ++ +++ L +Y+EL+
Sbjct: 349 IVGQEHYDVAQR----VQMTLQRYKELK 372
>gi|73543028|ref|YP_297548.1| F0F1 ATP synthase subunit beta [Ralstonia eutropha JMP134]
gi|118573728|sp|Q46VY0.1|ATPB_RALEJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|72120441|gb|AAZ62704.1| ATP synthase F1 subcomplex beta subunit [Ralstonia eutropha JMP134]
Length = 467
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 231/332 (69%), Positives = 282/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V +T PI PVG TLGRI++VLG PID G
Sbjct: 48 EVQQQLGDGVVRTIALGSSDGLRRGMAVKNTEAPISVPVGQGTLGRIMDVLGRPIDEAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S ++ IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IASDERRAIHQKAPKFDELSPSTDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
L+GL++AE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LSGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTLVLSRDIAALGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP +VG+EHY VA V+ LQ+YKEL+D
Sbjct: 348 SRQMDPQVVGQEHYNVARAVQQTLQRYKELRD 379
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 155/386 (40%), Gaps = 31/386 (8%)
Query: 118 IRFAYNIEYDYFDPRCLNQTLNIKFANNTVLSGQINGTTGYEEAAAQGFV-AVLIDDLKN 176
I F N +D L + FA + T ++ G V + +
Sbjct: 16 IEFPRNAMPKVYDALVLEDSSETSFAEKGL-------TFEVQQQLGDGVVRTIALGSSDG 68
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G TE +PVG LGRI++ G ID R + + AP +
Sbjct: 69 LRRGMAVKNTEAPISVPVGQGTLGRIMDVLGRPIDEAGPIASDERRAIHQKAPKFDELSP 128
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G+
Sbjct: 129 STDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVGE 188
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++K N +D +V + + +G T+ E FRD G+D L
Sbjct: 189 RTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALSGLTMAEKFRDEGRDILFFV 248
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P V Y L E K+ +++I + G
Sbjct: 249 DNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKTG 295
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P D + L ++ PA++ S SR V
Sbjct: 296 SITSIQAVYVPADDLTDPSPATTFLHLDSTLVLSRDIAALGIYPAVDPLDSTSRQMDPQV 355
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYREL 496
G Y + + ++ L +Y+EL
Sbjct: 356 VGQEHYNVARA----VQQTLQRYKEL 377
>gi|413964111|ref|ZP_11403338.1| F0F1 ATP synthase subunit beta [Burkholderia sp. SJ98]
gi|413929943|gb|EKS69231.1| F0F1 ATP synthase subunit beta [Burkholderia sp. SJ98]
Length = 459
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/356 (67%), Positives = 286/356 (80%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + + L+ +VQQQ+G+ +VRTI G ++G++R T+V +TGKPI
Sbjct: 16 VEFPRAQMPKIYDALILEGTELTLEVQQQLGDGVVRTICLGASDGLRRGTMVKNTGKPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G I S+ IH P F + +LETGIKVIDL+
Sbjct: 76 VPVGKPTLGRIMDVLGRPIDEAGPIESETTRSIHQNAPSFDELSPSTELLETGIKVIDLI 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA
Sbjct: 196 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSA 255
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMGKLQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGKLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLD 315
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 316 ATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYTITRGVQQTLQRYKELRD 371
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 146/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID + ++ + AP +
Sbjct: 60 GLRRGTMVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPIESETTRSIHQNAPSFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 120 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 240 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPN 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y I + ++ L +Y+EL +L K + KI + Q
Sbjct: 347 VIGEEHYTITRG----VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQP 402
Query: 528 PH 529
H
Sbjct: 403 FH 404
>gi|90023608|ref|YP_529435.1| F0F1 ATP synthase subunit alpha [Saccharophagus degradans 2-40]
gi|119367963|sp|Q21DK6.1|ATPA_SACD2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|89953208|gb|ABD83223.1| ATP synthase F1, alpha subunit [Saccharophagus degradans 2-40]
Length = 513
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 227/403 (56%), Positives = 308/403 (76%), Gaps = 2/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D + + +GQ C CT +I E+PVG EL GR+V++ G ID K K + +EKI
Sbjct: 74 AVVLGDYQGVAEGQSCKCTGRILEVPVGEELCGRVVDALGNPIDGKGPINAKKTDAIEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ G+K++D+M+PIG+GQRELIIGDRQTGKT +A+D IINQK +
Sbjct: 134 APGVIARQSVDQPVQIGLKAVDTMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGTGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ +V+ KL+ + MD+T+VVAATA+D A+ Q+++P+ GCT+GEYFRD
Sbjct: 194 CIYVAIGQKASSVASVVRKLEEHGAMDHTIVVAATASDPASMQFLAPFAGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N ++E+
Sbjct: 254 GEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEQL 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPA+N G+
Sbjct: 314 TNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGG+AQ K++KKLSG IR LAQYREL +FS+F+SDLD TK QL +GE+++ LMK
Sbjct: 374 SVSRVGGSAQTKVIKKLSGGIRTALAQYRELAAFSQFASDLDEATKAQLEHGERVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
QK + S+ E+ +++ + + + +I FE ++ Y
Sbjct: 434 QKQYSPQSVGEMAVVVYAANEGYLKDVEVSKIGDFESALLSYM 476
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 153/342 (44%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ G+ TG+ + PVG+ GR+++ LG+PID KG IN+KK I
Sbjct: 72 VGAVVLGDYQGVAEGQSCKCTGRILEVPVGEELCGRVVDALGNPIDGKGPINAKKTDAIE 131
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++ G+K +D + P +G + + G GKT ++ I I
Sbjct: 132 KIAPGVIARQSVDQPVQIGLKAVDTMVPIGRGQRELIIGDRQTGKTAVAVDAI----INQ 187
Query: 711 KGCS---VFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG +++ +G+++ +++E +D ++ ++P+ + G ++
Sbjct: 188 KGTGIKCIYVAIGQKASSVASVVRKLEEHGAMDHTIVVAATASDPASMQFLAPFAGCTMG 247
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 248 EYFRDRGEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNA 307
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + GI P
Sbjct: 308 DYVEQLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRP 367
Query: 873 AIDPLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
A++ S S+ + G KV + ++ L +Y+EL
Sbjct: 368 AMNAGISVSR-----VGGSAQTKVIKKLSGGIRTALAQYREL 404
>gi|254492881|ref|ZP_05106052.1| ATP synthase subunit beta [Neisseria gonorrhoeae 1291]
gi|268598130|ref|ZP_06132297.1| ATP synthase subunit beta [Neisseria gonorrhoeae MS11]
gi|226511921|gb|EEH61266.1| ATP synthase subunit beta [Neisseria gonorrhoeae 1291]
gi|268582261|gb|EEZ46937.1| ATP synthase subunit beta [Neisseria gonorrhoeae MS11]
Length = 465
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 238/365 (65%), Positives = 287/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + + L N +VQQ +G+ +VRTIA G+++G+KR V DTG
Sbjct: 13 VVDVEFPRDMIPRVYDALKLDENGLTLEVQQLLGDGVVRTIAMGSSDGLKRGMTVSDTGS 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG P+D G I++ K IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQAAPKFDELSSTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFSGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 151/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRIV+ G +D + + AP +
Sbjct: 60 GLKRGMTVSDTGSPITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQAAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 STTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFSGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLAVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|344343250|ref|ZP_08774119.1| ATP synthase subunit beta [Marichromatium purpuratum 984]
gi|343805181|gb|EGV23078.1| ATP synthase subunit beta [Marichromatium purpuratum 984]
Length = 460
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T+G++R V TG PI PVG TLGRI++VLG+ ID +G+
Sbjct: 40 EVQQQLGDGVVRTIAMGSTDGLQRGLEVAATGAPIQVPVGQKTLGRIMDVLGNAIDEQGD 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH PK +Q ILETGIKV+DL+ P KGGK+GLFGGAGVGKTV +M
Sbjct: 100 IGAEETWSIHRPAPKLEDQSTTTEILETGIKVVDLIMPIAKGGKVGLFGGAGVGKTVTLM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA EH G SVF GVGER+REGNDFYHEMKESNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMKESNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLA EMG LQE
Sbjct: 220 LTGLTMAEYFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELGIYPA+DPL+S
Sbjct: 280 RITSTKTGSITSFQAVYVPADDLTDPSPATTFAHLDATLVLSRQIAELGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+ LDP +VG+EHY+ A V+ LQ+YKELKD
Sbjct: 340 SRILDPNVVGQEHYETARAVQGTLQRYKELKD 371
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 145/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T ++PVG + LGRI++ G ID + + ++ + AP + D+
Sbjct: 60 GLQRGLEVAATGAPIQVPVGQKTLGRIMDVLGNAIDEQGDIGAEETWSIHRPAPKLEDQS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK +D ++PI KG + + G GKT ++ I N + ++ +G
Sbjct: 120 TTTEILETGIKVVDLIMPIAKGGKVGLFGGAGVGKTVTLMELIRNIAAEHSGFSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ EYFRD G+D L+
Sbjct: 180 ERTREGNDFYHEMKESNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLLF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + L ER I +
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQER-------------ITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+F + D+T P + D + L + PA++ S SR
Sbjct: 287 GSITSFQAVYVPADDLTDPSPATTFAHLDATLVLSRQIAELGIYPAVDPLDSTSRILDPN 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + + G L +Y+EL+
Sbjct: 347 VVGQEHYETARAVQG----TLQRYKELK 370
>gi|300689832|ref|YP_003750827.1| ATP synthase F1 sector subunit beta [Ralstonia solanacearum PSI07]
gi|299076892|emb|CBJ49505.1| ATP synthase, F1 sector, beta subunit [Ralstonia solanacearum
PSI07]
Length = 467
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG I PVG TLGRI++VLG PID G
Sbjct: 48 EVQQQLGDGVVRTIALGSSDGLRRGMAVKGTGAAISVPVGHGTLGRIMDVLGRPIDEAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +K IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IACDEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG EHY+VA+ VK LQ+YKEL+D
Sbjct: 348 SRQLDPQVVGTEHYEVADRVKKTLQRYKELRD 379
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 138/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID + + + AP +
Sbjct: 68 GLRRGMAVKGTGAAISVPVGHGTLGRIMDVLGRPIDEAGPIACDEKRAIHQKAPKFDELS 127
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 128 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 187
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 188 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 247
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 248 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 294
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 295 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQ 354
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y++ + ++ L +Y+EL
Sbjct: 355 VVGTEHYEVADR----VKKTLQRYKEL 377
>gi|268602705|ref|ZP_06136872.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID1]
gi|268586836|gb|EEZ51512.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID1]
Length = 465
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 238/365 (65%), Positives = 287/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + + L N +VQQ +G+ +VRTIA G+++G+KR V DTG
Sbjct: 13 VVDVEFPRDMIPRVYDALKLDENGLTLEVQQLLGDGVVRTIAMGSSDGLKRGMTVSDTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG P+D G I++ K IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQAAPKFDELSSTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFSGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 151/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRIV+ G +D + + AP +
Sbjct: 60 GLKRGMTVSDTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQAAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 STTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFSGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLAVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|254201537|ref|ZP_04907901.1| ATP synthase F1, beta subunit [Burkholderia mallei FMH]
gi|403520677|ref|YP_006654811.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei BPC006]
gi|147747431|gb|EDK54507.1| ATP synthase F1, beta subunit [Burkholderia mallei FMH]
gi|403076319|gb|AFR17899.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei BPC006]
Length = 469
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 277/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R +V +TG PI PVG TLGRI++VLG PID G
Sbjct: 50 EVQQQLGDGVVRTICLGASDGLRRGVVVKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGP 109
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S+ K IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 110 IESENKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 169
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 170 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 229
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 230 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 289
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 290 RITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 349
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 350 SRQIDPNVIGEEHYSITRRVQQTLQRYKELRD 381
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 144/346 (41%), Gaps = 25/346 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID +N+ ++ + AP + E L TGIK ID +
Sbjct: 86 VPVGKPTLGRIMDVLGRPIDEAGPIESENKRSIHQKAPAFDELSPSTELLETGIKVIDLI 145
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K ++ +G++ + +++K
Sbjct: 146 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 205
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
N +D +V + + TG T+ E+FRD G D L D++ + A ++S
Sbjct: 206 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSA 265
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P V Y L E K+ +++I + G++T+ + D+
Sbjct: 266 LLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKKGSITSVQAVYVPADDL 312
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P D + L ++ + PA++ S SR V G Y I ++
Sbjct: 313 TDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRR---- 368
Query: 486 IRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
++ L +Y+EL +L K + KI + Q H
Sbjct: 369 VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQPFH 414
>gi|302880127|ref|YP_003848691.1| ATP synthase F1 subunit alpha [Gallionella capsiferriformans ES-2]
gi|302582916|gb|ADL56927.1| ATP synthase F1, alpha subunit [Gallionella capsiferriformans ES-2]
Length = 513
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 229/407 (56%), Positives = 312/407 (76%), Gaps = 2/407 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++T+G CT +I E+PVG EL GR+VN+ G+ ID K K + +EK+
Sbjct: 73 AVILGEYEHITEGDTVKCTGRILEVPVGPELCGRVVNALGQPIDGKGPINAKMTDKIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG+++R+SV++P+ TG+KSID+M+P+G+GQRELIIGDRQTGKT +AID IINQK + +
Sbjct: 133 APGVIERQSVDQPVQTGLKSIDAMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQGIT 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S+++NV+ KL+ + + YT+VVAATA+DSAA Q+++PY GCT+GEYFRD
Sbjct: 193 CIYVAIGQKASTVVNVVRKLEEHGALGYTIVVAATASDSAAMQFLAPYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 253 GEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNVEYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TKGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKL G +R+ LAQYREL +F++F+SDLD T+ QL G+ ++ LMK
Sbjct: 373 SVSRVGGAAQTKVIKKLGGGVRLALAQYRELAAFAQFASDLDEATRKQLERGKLVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIIN 572
Q + S+ E+ + L + +F + + + FE + Y + N
Sbjct: 433 QLQYCPLSVAEMSVTLFCVNKGYFDDVAVPKALAFESAVHAYLKSKN 479
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 150/339 (44%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I V TG+ + PVG GR++N LG PID KG IN+K I
Sbjct: 71 VGAVILGEYEHITEGDTVKCTGRILEVPVGPELCGRVVNALGQPIDGKGPINAKMTDKIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GKT ++ I N +
Sbjct: 131 KVAPGVIERQSVDQPVQTGLKSIDAMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQG 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ + +++E L ++ ++ + + G ++ E F
Sbjct: 191 ITC-IYVAIGQKASTVVNVVRKLEEHGALGYTIVVAATASDSAAMQFLAPYAGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERIS------- 823
R+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 250 RDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNVEYV 309
Query: 824 --------STKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
+ K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 310 EKFTKGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G KV + V+ L +Y+EL
Sbjct: 370 AGISVSR-----VGGAAQTKVIKKLGGGVRLALAQYREL 403
>gi|344339940|ref|ZP_08770867.1| ATP synthase subunit beta [Thiocapsa marina 5811]
gi|343800119|gb|EGV18066.1| ATP synthase subunit beta [Thiocapsa marina 5811]
Length = 460
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/350 (67%), Positives = 286/350 (81%)
Query: 563 NIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDC 622
I K + + +++ +VQQQ+G+ +VR IA G+T+G++R + TG PI PVG
Sbjct: 22 EIPKVYEALKIESTGLTLEVQQQLGDGVVRAIAMGSTDGLQRGIPAIATGAPIQVPVGQK 81
Query: 623 TLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKG 682
TLGRI++VLG+PID G++ S+++ IH P F +Q + ILETGIKVIDL+ P KG
Sbjct: 82 TLGRIMDVLGNPIDELGDVGSEERWSIHRSAPPFEDQATSTEILETGIKVIDLIMPIPKG 141
Query: 683 GKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKV 742
GK+GLFGGAGVGKTV +MELIRNIA EH G SVF GVGER+REGNDFYHEMKESNVLDKV
Sbjct: 142 GKVGLFGGAGVGKTVTLMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMKESNVLDKV 201
Query: 743 SLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTP 802
+L+YGQMNEP GNRLRVALTGL++AE FR G+DVLLF+DNIYR+TLAGTEVSA+LGR P
Sbjct: 202 ALVYGQMNEPPGNRLRVALTGLTMAEFFREEGRDVLLFVDNIYRYTLAGTEVSALLGRMP 261
Query: 803 SAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLS 862
SAVGYQPTLA EMG LQERI+ST+ G+ITS QA+YVPADDLTDPSP+TTF HLD+T+VLS
Sbjct: 262 SAVGYQPTLASEMGALQERITSTRTGSITSFQAVYVPADDLTDPSPATTFAHLDATLVLS 321
Query: 863 RQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
RQIAELGIYPA+DPL+S S+ LDP +VG+EHY+ A V+ LQ+YKELKD
Sbjct: 322 RQIAELGIYPAVDPLDSTSRILDPNVVGQEHYQTARAVQGTLQRYKELKD 371
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 146/336 (43%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L +G T ++PVG + LGRI++ G ID + R ++ +
Sbjct: 52 AIAMGSTDGLQRGIPAIATGAPIQVPVGQKTLGRIMDVLGNPIDELGDVGSEERWSIHRS 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP D+ + E L TGIK ID ++PI KG + + G GKT ++ I N +
Sbjct: 112 APPFEDQATSTEILETGIKVIDLIMPIPKGGKVGLFGGAGVGKTVTLMELIRNIAAEHSG 171
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++K N +D +V + + TG T+ E+FR+
Sbjct: 172 FSVFAGVGERTREGNDFYHEMKESNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRE 231
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L+ D++ ++ A ++S LL R P + + L ER
Sbjct: 232 EGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQER----------- 280
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
I + G++T+F + D+T P + D + L + PA++ S
Sbjct: 281 --ITSTRTGSITSFQAVYVPADDLTDPSPATTFAHLDATLVLSRQIAELGIYPAVDPLDS 338
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y+ + + G L +Y+EL+
Sbjct: 339 TSRILDPNVVGQEHYQTARAVQG----TLQRYKELK 370
>gi|344173030|emb|CCA85699.1| ATP synthase, F1 sector, beta subunit [Ralstonia syzygii R24]
Length = 467
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG I PVG TLGRI++VLG PID G
Sbjct: 48 EVQQQLGDGVVRTIALGSSDGLRRGMAVKGTGAAISVPVGHGTLGRIMDVLGRPIDEAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +K IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IACDEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY+VA V+ LQ+YKEL+D
Sbjct: 348 SRQLDPQVVGQEHYEVARRVQQTLQRYKELRD 379
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 139/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID + + + AP +
Sbjct: 68 GLRRGMAVKGTGAAISVPVGHGTLGRIMDVLGRPIDEAGPIACDEKRAIHQKAPKFDELS 127
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 128 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 187
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 188 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 247
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 248 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 294
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 295 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQ 354
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y++ ++ ++ L +Y+EL
Sbjct: 355 VVGQEHYEVARR----VQQTLQRYKEL 377
>gi|194367283|ref|YP_002029893.1| F0F1 ATP synthase subunit beta [Stenotrophomonas maltophilia
R551-3]
gi|226740679|sp|B4SJR9.1|ATPB_STRM5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|194350087|gb|ACF53210.1| ATP synthase F1, beta subunit [Stenotrophomonas maltophilia R551-3]
Length = 468
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/362 (65%), Positives = 287/362 (79%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + ++N +VQQQ+G+ +VR IA G+T+G+KRN + V+TG+ I
Sbjct: 16 VEFPRESVPKVYDALKVENTEITLEVQQQLGDGVVRCIALGSTDGLKRNLVAVNTGRGIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G + + IH P + +Q +LETGIKVIDL+
Sbjct: 76 VPVGAGTLGRIMDVLGRPIDEAGPVAASDSWEIHRDAPSYEDQSPATELLETGIKVIDLM 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
NVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLF+DNIYR+TLA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLA 255
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STKNG+ITS+QA+YVPADDLTDPSP+T
Sbjct: 256 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKNGSITSIQAVYVPADDLTDPSPAT 315
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLDST+ LSR IA LGIYPA+DPL+S S+Q+DP ++G EHY A V+ LQKYKEL
Sbjct: 316 TFAHLDSTVTLSRSIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375
Query: 911 KD 912
KD
Sbjct: 376 KD 377
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 29/324 (8%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T + +PVG LGRI++ G ID + + + AP D+ E L TGI
Sbjct: 70 TGRGISVPVGAGTLGRIMDVLGRPIDEAGPVAASDSWEIHRDAPSYEDQSPATELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 130 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDL 358
+++K N +D +V + + TG T+ EYFRD G+D L+ D++
Sbjct: 190 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNI 249
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P V Y L E + +++I + NG++T
Sbjct: 250 YRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKNGSIT 296
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L ++ + PA++ S SR V G
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDSTVTLSRSIASLGIYPAVDPLDSTSRQMDPLVIGH 356
Query: 474 AQYKIVKKLSGDIRIMLAQYRELE 497
Y ++ ++ L +Y+EL+
Sbjct: 357 EHYDTAQR----VQQTLQKYKELK 376
>gi|91785733|ref|YP_560939.1| F0F1 ATP synthase subunit beta [Burkholderia xenovorans LB400]
gi|118573517|sp|Q13SQ2.1|ATPB2_BURXL RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
synthase F1 sector subunit beta 2; AltName:
Full=F-ATPase subunit beta 2
gi|91689687|gb|ABE32887.1| ATP synthase F1 subcomplex beta subunit [Burkholderia xenovorans
LB400]
Length = 464
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 240/356 (67%), Positives = 287/356 (80%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + L+ + +VQQQ+G+ +VRTI G ++G++R T V +TGKPI
Sbjct: 21 VEFPRDHMPKIYDALILEGSELTLEVQQQLGDGVVRTICLGASDGLRRGTTVKNTGKPIS 80
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G INS IH P F + +LETGIKVIDL+
Sbjct: 81 VPVGKPTLGRIMDVLGRPIDEAGPINSDVVRGIHQKAPAFDELSPSTELLETGIKVIDLI 140
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 141 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 200
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA
Sbjct: 201 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSA 260
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMGKLQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 261 LLGRMPSAVGYQPTLAEEMGKLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLD 320
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 321 ATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRGVQQTLQRYKELRD 376
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 135/327 (41%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID + + AP +
Sbjct: 65 GLRRGTTVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPINSDVVRGIHQKAPAFDELS 124
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 125 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 184
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 185 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 244
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 245 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 291
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 292 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPN 351
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y I + ++ L +Y+EL
Sbjct: 352 VIGEEHYSITRG----VQQTLQRYKEL 374
>gi|237814345|ref|YP_002898796.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei MSHR346]
gi|254184023|ref|ZP_04890614.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1655]
gi|184214555|gb|EDU11598.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1655]
gi|237504492|gb|ACQ96810.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei MSHR346]
Length = 463
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 277/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R +V +TG PI PVG TLGRI++VLG PID G
Sbjct: 45 EVQQQLGDGVVRTICLGASDGLRRGVVVKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGP 104
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S+ K IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 105 IESENKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 164
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 165 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 224
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 225 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 284
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 285 RITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 344
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 345 SRQIDPNVIGEEHYSITRRVQQTLQRYKELRD 376
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 144/346 (41%), Gaps = 25/346 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID +N+ ++ + AP + E L TGIK ID +
Sbjct: 81 VPVGKPTLGRIMDVLGRPIDEAGPIESENKRSIHQKAPAFDELSPSTELLETGIKVIDLI 140
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K ++ +G++ + +++K
Sbjct: 141 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 200
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
N +D +V + + TG T+ E+FRD G D L D++ + A ++S
Sbjct: 201 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSA 260
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P V Y L E K+ +++I + G++T+ + D+
Sbjct: 261 LLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKKGSITSVQAVYVPADDL 307
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P D + L ++ + PA++ S SR V G Y I ++
Sbjct: 308 TDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRR---- 363
Query: 486 IRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
++ L +Y+EL +L K + KI + Q H
Sbjct: 364 VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQPFH 409
>gi|34499992|gb|AAQ73578.1| ATP synthase beta subunit [Gallibacterium genomosp. 1]
Length = 444
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/356 (67%), Positives = 289/356 (81%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + +N++ + + +VQQQ+G IVR IA G+++G+KR V +TG PI
Sbjct: 16 VEFPQDAVPKVYEALNVETGLVL-EVQQQLGGGIVRCIAMGSSDGLKRGLSVTNTGSPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G I K++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTETLGRIMNVLGEPIDERGPIGEKERWSIHRAAPSYEEQANSTELLETGIKVIDLV 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM+ES
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMQES 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+T AGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTRAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+S K G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSNKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSRQIA LGIY L+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRQIASLGIYLRWIRLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKD 370
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 143/329 (43%), Gaps = 25/329 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG E LGRI+N GE ID + K R ++ + AP ++
Sbjct: 59 GLKRGLSVTNTGSPISVPVGTETLGRIMNVLGEPIDERGPIGEKERWSIHRAAPSYEEQA 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMQESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 VDNIYRYTRAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSNKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSN-YRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L + + Y I + S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYLRWIRLD-STSRQLDP 344
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + + G +L +Y+EL+
Sbjct: 345 QVVGQEHYDVARGVQG----ILQRYKELK 369
>gi|451812655|ref|YP_007449108.1| F-type H+-transporting ATPase subunit alpha [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|451778624|gb|AGF49504.1| F-type H+-transporting ATPase subunit alpha [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 513
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/403 (58%), Positives = 311/403 (77%), Gaps = 2/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++G T +I E+PVG+ L GR+VN+ GE ID + + +EK+
Sbjct: 73 AVVLGDYTGISEGDIVRTTGRILEVPVGYGLRGRVVNALGEPIDGRGSIKHDATDIIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR +V++PL TGIKSIDSM+PIG+GQRELIIGDRQTGKT++AIDTIINQKN V
Sbjct: 133 APGVIDRRTVSQPLQTGIKSIDSMVPIGRGQRELIIGDRQTGKTSVAIDTIINQKNSGVT 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK +S+ NV+ KL+ Y ++YT++VAATA+DSAA QYI+PY+GCT+GEYFRD
Sbjct: 193 CIYVAIGQKAASINNVVRKLEEYGALEYTIIVAATASDSAAMQYIAPYSGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQISLLL+RPPGREA+PGDVFYLHSRLLERS+++++ ++EK
Sbjct: 253 GEDALIVYDDLTKQAWAYRQISLLLKRPPGREAYPGDVFYLHSRLLERSARVSENYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K + G+LT+ PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TKGVVKNKTGSLTSLPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGG+AQ KI+KKLSG IR LAQYREL +FS+FSSDLD T+ QL G+++ L+K
Sbjct: 373 SVSRVGGSAQTKIIKKLSGGIRTDLAQYRELAAFSQFSSDLDEATRRQLDRGKRVVELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
Q ++ + E ++L + F + + I LFE I +F
Sbjct: 433 QAQYQPLKVWEQALLLFSLNRGFMDDVNVSDIALFERFIKDFF 475
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 153/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ GI IV TG+ + PVG GR++N LG+PID +G I I
Sbjct: 71 VGAVVLGDYTGISEGDIVRTTGRILEVPVGYGLRGRVVNALGEPIDGRGSIKHDATDIIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P ++ + L+TGIK ID + P +G + + G GKT ++ I N
Sbjct: 131 KVAPGVIDRRTVSQPLQTGIKSIDSMVPIGRGQRELIIGDRQTGKTSVAIDTIINQKNSG 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ N+ +++E L+ ++ ++ + + +G ++ E F
Sbjct: 191 VTC-IYVAIGQKAASINNVVRKLEEYGALEYTIIVAATASDSAAMQYIAPYSGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY-------QPTLAEEMGKLQER-- 821
R+ G+D L+ D++ + A ++S +L R P Y L E ++ E
Sbjct: 250 RDRGEDALIVYDDLTKQAWAYRQISLLLKRPPGREAYPGDVFYLHSRLLERSARVSENYV 309
Query: 822 ------ISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
+ K G++TS+ I A D++ P+ + D I L + GI PAI+
Sbjct: 310 EKFTKGVVKNKTGSLTSLPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
S S+ + G K+ + ++ L +Y+EL
Sbjct: 370 AGISVSR-----VGGSAQTKIIKKLSGGIRTDLAQYREL 403
>gi|53721003|ref|YP_109989.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei K96243]
gi|53724016|ref|YP_104462.1| ATP synthase F0F1 subunit beta [Burkholderia mallei ATCC 23344]
gi|76809634|ref|YP_331595.1| ATP synthase F0F1 subunit beta [Burkholderia pseudomallei 1710b]
gi|83718763|ref|YP_443800.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis E264]
gi|121599585|ref|YP_994634.1| F0F1 ATP synthase subunit beta [Burkholderia mallei SAVP1]
gi|126439925|ref|YP_001060961.1| ATP synthase F0F1 subunit beta [Burkholderia pseudomallei 668]
gi|126448967|ref|YP_001082535.1| ATP synthase F0F1 subunit beta [Burkholderia mallei NCTC 10247]
gi|126455115|ref|YP_001068261.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 1106a]
gi|134281409|ref|ZP_01768117.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 305]
gi|217424098|ref|ZP_03455598.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 576]
gi|226193310|ref|ZP_03788920.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pakistan
9]
gi|238561567|ref|ZP_00441840.2| ATP synthase F1, beta subunit [Burkholderia mallei GB8 horse 4]
gi|242317222|ref|ZP_04816238.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1106b]
gi|251767098|ref|ZP_04819956.1| ATP synthase F1, beta subunit [Burkholderia mallei PRL-20]
gi|254174689|ref|ZP_04881350.1| ATP synthase F1, beta subunit [Burkholderia mallei ATCC 10399]
gi|254186488|ref|ZP_04893005.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pasteur
52237]
gi|254194697|ref|ZP_04901128.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei S13]
gi|254261967|ref|ZP_04953021.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1710a]
gi|254298703|ref|ZP_04966154.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 406e]
gi|386863696|ref|YP_006276645.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 1026b]
gi|418394744|ref|ZP_12968839.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 354a]
gi|418537315|ref|ZP_13102955.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 1026a]
gi|418542359|ref|ZP_13107798.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 1258a]
gi|418548840|ref|ZP_13113938.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 1258b]
gi|418554850|ref|ZP_13119611.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 354e]
gi|81823891|sp|Q62FR5.1|ATPB1_BURMA RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
synthase F1 sector subunit beta 1; AltName:
Full=F-ATPase subunit beta 1
gi|81824616|sp|Q63PI0.1|ATPB1_BURPS RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
synthase F1 sector subunit beta 1; AltName:
Full=F-ATPase subunit beta 1
gi|118573514|sp|Q3JXV8.1|ATPB1_BURP1 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
synthase F1 sector subunit beta 1; AltName:
Full=F-ATPase subunit beta 1
gi|118573516|sp|Q2STE9.1|ATPB1_BURTA RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
synthase F1 sector subunit beta 1; AltName:
Full=F-ATPase subunit beta 1
gi|190358205|sp|A3MQJ9.1|ATPB1_BURM7 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
synthase F1 sector subunit beta 1; AltName:
Full=F-ATPase subunit beta 1
gi|190358206|sp|A1V8T1.1|ATPB1_BURMS RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
synthase F1 sector subunit beta 1; AltName:
Full=F-ATPase subunit beta 1
gi|190358207|sp|A3P0Z0.1|ATPB1_BURP0 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
synthase F1 sector subunit beta 1; AltName:
Full=F-ATPase subunit beta 1
gi|190358208|sp|A3NF40.1|ATPB1_BURP6 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
synthase F1 sector subunit beta 1; AltName:
Full=F-ATPase subunit beta 1
gi|52211417|emb|CAH37408.1| ATP synthase beta chain [Burkholderia pseudomallei K96243]
gi|52427439|gb|AAU48032.1| ATP synthase F1, beta subunit [Burkholderia mallei ATCC 23344]
gi|76579087|gb|ABA48562.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1710b]
gi|83652588|gb|ABC36651.1| ATP synthase F1, beta subunit [Burkholderia thailandensis E264]
gi|121228395|gb|ABM50913.1| ATP synthase F1, beta subunit [Burkholderia mallei SAVP1]
gi|126219418|gb|ABN82924.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 668]
gi|126228757|gb|ABN92297.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1106a]
gi|126241837|gb|ABO04930.1| ATP synthase F1, beta subunit [Burkholderia mallei NCTC 10247]
gi|134247076|gb|EBA47162.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 305]
gi|157808477|gb|EDO85647.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 406e]
gi|157934173|gb|EDO89843.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pasteur
52237]
gi|160695734|gb|EDP85704.1| ATP synthase F1, beta subunit [Burkholderia mallei ATCC 10399]
gi|169651447|gb|EDS84140.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei S13]
gi|217393161|gb|EEC33183.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 576]
gi|225934910|gb|EEH30887.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pakistan
9]
gi|238524340|gb|EEP87773.1| ATP synthase F1, beta subunit [Burkholderia mallei GB8 horse 4]
gi|242140461|gb|EES26863.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1106b]
gi|243063944|gb|EES46130.1| ATP synthase F1, beta subunit [Burkholderia mallei PRL-20]
gi|254220656|gb|EET10040.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1710a]
gi|385350024|gb|EIF56576.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 1026a]
gi|385355751|gb|EIF61912.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 1258a]
gi|385357058|gb|EIF63137.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 1258b]
gi|385369594|gb|EIF74907.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 354e]
gi|385374665|gb|EIF79504.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 354a]
gi|385660824|gb|AFI68247.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 1026b]
Length = 464
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 277/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R +V +TG PI PVG TLGRI++VLG PID G
Sbjct: 45 EVQQQLGDGVVRTICLGASDGLRRGVVVKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGP 104
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S+ K IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 105 IESENKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 164
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 165 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 224
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 225 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 284
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 285 RITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 344
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 345 SRQIDPNVIGEEHYSITRRVQQTLQRYKELRD 376
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 144/346 (41%), Gaps = 25/346 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID +N+ ++ + AP + E L TGIK ID +
Sbjct: 81 VPVGKPTLGRIMDVLGRPIDEAGPIESENKRSIHQKAPAFDELSPSTELLETGIKVIDLI 140
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K ++ +G++ + +++K
Sbjct: 141 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 200
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
N +D +V + + TG T+ E+FRD G D L D++ + A ++S
Sbjct: 201 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSA 260
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P V Y L E K+ +++I + G++T+ + D+
Sbjct: 261 LLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKKGSITSVQAVYVPADDL 307
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P D + L ++ + PA++ S SR V G Y I ++
Sbjct: 308 TDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRR---- 363
Query: 486 IRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
++ L +Y+EL +L K + KI + Q H
Sbjct: 364 VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQPFH 409
>gi|437999754|ref|YP_007183487.1| ATP synthase F1 subunit beta [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|451812657|ref|YP_007449110.1| F-type H+-transporting ATPase subunit beta [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|429338988|gb|AFZ83410.1| ATP synthase F1 subunit beta [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|451778626|gb|AGF49506.1| F-type H+-transporting ATPase subunit beta [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 467
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/340 (69%), Positives = 287/340 (84%), Gaps = 1/340 (0%)
Query: 573 LKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLG 632
++ N+++ +VQQQ+G+ IVRTIA G+++G+ R ++ T PI PVGD TLGRI+NVLG
Sbjct: 39 MEKNLTL-EVQQQLGDGIVRTIALGSSDGLSRGMRIIRTNGPISVPVGDGTLGRIMNVLG 97
Query: 633 DPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAG 692
PID G I +K IH P+F + + +LETGIKVIDL+CPF KGGK+GLFGGAG
Sbjct: 98 KPIDEAGPIIHEKTRSIHQDAPRFEDLSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAG 157
Query: 693 VGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEP 752
VGKTVNMMELI NIA +H G SVF GVGER+REGNDFYHEM ES VLDKV++++GQMNEP
Sbjct: 158 VGKTVNMMELINNIAKQHSGLSVFAGVGERTREGNDFYHEMAESKVLDKVAMVFGQMNEP 217
Query: 753 SGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLA 812
GNRLRVALTGL+IAE+FR+ G+DVL FIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLA
Sbjct: 218 PGNRLRVALTGLTIAEKFRDDGRDVLFFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLA 277
Query: 813 EEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
EEMGKLQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYP
Sbjct: 278 EEMGKLQERITSTKKGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYP 337
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
A+DPL+S S+QL+P IVG+EHYKVA +V+ LQ+YK+L+D
Sbjct: 338 AVDPLDSTSRQLNPQIVGDEHYKVARQVQQTLQRYKDLRD 377
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 139/326 (42%), Gaps = 23/326 (7%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L++G + T +PVG LGRI+N G+ ID + + ++ + AP D
Sbjct: 67 LSRGMRIIRTNGPISVPVGDGTLGRIMNVLGKPIDEAGPIIHEKTRSIHQDAPRFEDLSP 126
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G+
Sbjct: 127 SVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVGE 186
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++ +D +V + + TG TI E FRD G+D L
Sbjct: 187 RTREGNDFYHEMAESKVLDKVAMVFGQMNEPPGNRLRVALTGLTIAEKFRDDGRDVLFFI 246
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + L E K+ + KK G
Sbjct: 247 DNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGKLQERITSTKK------G 293
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P D + L ++ PA++ S SR +
Sbjct: 294 SITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLNPQI 353
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYREL 496
G YK+ ++ ++ L +Y++L
Sbjct: 354 VGDEHYKVARQ----VQQTLQRYKDL 375
>gi|385207670|ref|ZP_10034538.1| ATP synthase, F1 beta subunit [Burkholderia sp. Ch1-1]
gi|385180008|gb|EIF29284.1| ATP synthase, F1 beta subunit [Burkholderia sp. Ch1-1]
Length = 464
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 240/356 (67%), Positives = 287/356 (80%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + L+ + +VQQQ+G+ +VRTI G ++G++R T V +TGKPI
Sbjct: 21 VEFPRDHMPKIYDALILEGSELTLEVQQQLGDGVVRTICLGASDGLRRGTTVKNTGKPIS 80
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G INS IH P F + +LETGIKVIDL+
Sbjct: 81 VPVGKPTLGRIMDVLGRPIDEAGPINSDVVRGIHQKAPAFDELSPSTELLETGIKVIDLI 140
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 141 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 200
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA
Sbjct: 201 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSA 260
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMGKLQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 261 LLGRMPSAVGYQPTLAEEMGKLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLD 320
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 321 ATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYAITRGVQQTLQRYKELRD 376
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 135/327 (41%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID + + AP +
Sbjct: 65 GLRRGTTVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPINSDVVRGIHQKAPAFDELS 124
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 125 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 184
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 185 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 244
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 245 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 291
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 292 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPN 351
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y I + ++ L +Y+EL
Sbjct: 352 VIGEEHYAITRG----VQQTLQRYKEL 374
>gi|350545027|ref|ZP_08914544.1| ATP synthase beta chain [Candidatus Burkholderia kirkii UZHbot1]
gi|350527226|emb|CCD38712.1| ATP synthase beta chain [Candidatus Burkholderia kirkii UZHbot1]
Length = 459
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 278/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
++QQQ+G+ +VRTI G ++G++R T+V +TGKPI PVG TLGRI++VLG PID G
Sbjct: 40 EIQQQLGDGVVRTICLGASDGLRRGTMVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S+ IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IESEATRSIHQHAPSFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 220 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 340 SRQIDPNVIGEEHYTITRGVQQTLQRYKELRD 371
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 146/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID + ++ + AP +
Sbjct: 60 GLRRGTMVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPIESEATRSIHQHAPSFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 120 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 240 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPN 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y I + ++ L +Y+EL +L K + KI + Q
Sbjct: 347 VIGEEHYTITRG----VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQP 402
Query: 528 PH 529
H
Sbjct: 403 FH 404
>gi|124383817|ref|YP_001027567.1| ATP synthase F0F1 subunit beta [Burkholderia mallei NCTC 10229]
gi|167582834|ref|ZP_02375708.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis TXDOH]
gi|167620974|ref|ZP_02389605.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis Bt4]
gi|167721822|ref|ZP_02405058.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei DM98]
gi|167740794|ref|ZP_02413568.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 14]
gi|167818009|ref|ZP_02449689.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 91]
gi|167826372|ref|ZP_02457843.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 9]
gi|167847891|ref|ZP_02473399.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei B7210]
gi|167896448|ref|ZP_02483850.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 7894]
gi|167904850|ref|ZP_02492055.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei NCTC
13177]
gi|167913128|ref|ZP_02500219.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 112]
gi|167921065|ref|ZP_02508156.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei BCC215]
gi|254206873|ref|ZP_04913224.1| ATP synthase F1, beta subunit [Burkholderia mallei JHU]
gi|254357427|ref|ZP_04973701.1| ATP synthase F1, beta subunit [Burkholderia mallei 2002721280]
gi|190358265|sp|A2S6J8.1|ATPB_BURM9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|124291837|gb|ABN01106.1| ATP synthase F1, beta subunit [Burkholderia mallei NCTC 10229]
gi|147752415|gb|EDK59481.1| ATP synthase F1, beta subunit [Burkholderia mallei JHU]
gi|148026491|gb|EDK84576.1| ATP synthase F1, beta subunit [Burkholderia mallei 2002721280]
Length = 459
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 277/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R +V +TG PI PVG TLGRI++VLG PID G
Sbjct: 40 EVQQQLGDGVVRTICLGASDGLRRGVVVKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S+ K IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IESENKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 220 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 340 SRQIDPNVIGEEHYSITRRVQQTLQRYKELRD 371
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 144/346 (41%), Gaps = 25/346 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID +N+ ++ + AP + E L TGIK ID +
Sbjct: 76 VPVGKPTLGRIMDVLGRPIDEAGPIESENKRSIHQKAPAFDELSPSTELLETGIKVIDLI 135
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K ++ +G++ + +++K
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 195
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
N +D +V + + TG T+ E+FRD G D L D++ + A ++S
Sbjct: 196 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSA 255
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P V Y L E K+ +++I + G++T+ + D+
Sbjct: 256 LLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKKGSITSVQAVYVPADDL 302
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P D + L ++ + PA++ S SR V G Y I ++
Sbjct: 303 TDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRR---- 358
Query: 486 IRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
++ L +Y+EL +L K + KI + Q H
Sbjct: 359 VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQPFH 404
>gi|187925863|ref|YP_001897505.1| F0F1 ATP synthase subunit beta [Burkholderia phytofirmans PsJN]
gi|187717057|gb|ACD18281.1| ATP synthase F1, beta subunit [Burkholderia phytofirmans PsJN]
Length = 464
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/332 (71%), Positives = 277/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R T V +TGKPI PVG TLGRI++VLG PID G
Sbjct: 45 EVQQQLGDGVVRTICLGASDGLRRGTTVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGP 104
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
INS IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 105 INSDVVRGIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 164
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 165 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 224
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 225 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 284
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 285 RITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 344
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 345 SRQIDPNVIGEEHYSITRGVQQTLQRYKELRD 376
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 135/327 (41%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID + + AP +
Sbjct: 65 GLRRGTTVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPINSDVVRGIHQKAPAFDELS 124
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 125 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 184
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 185 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 244
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 245 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 291
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 292 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPN 351
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y I + ++ L +Y+EL
Sbjct: 352 VIGEEHYSITRG----VQQTLQRYKEL 374
>gi|319940679|ref|ZP_08015021.1| ATP synthase subunit alpha 1 [Sutterella wadsworthensis 3_1_45B]
gi|319805830|gb|EFW02597.1| ATP synthase subunit alpha 1 [Sutterella wadsworthensis 3_1_45B]
Length = 513
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/418 (56%), Positives = 316/418 (75%), Gaps = 4/418 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + + +++G T +I +PVG EL+GR+VN+ G+ ID K K + VEK+
Sbjct: 73 AVILGEYEGISEGDTVKTTGRILSVPVGEELIGRVVNALGQPIDGKGPINAKAFDVVEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR+SV++P+ TG+KSIDSM+PIG+GQRELIIGDRQTGKT +AIDTIINQK K++I
Sbjct: 133 APGVIDRKSVSQPVQTGLKSIDSMVPIGRGQRELIIGDRQTGKTAVAIDTIINQKGKDLI 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ + MDYT+VVAATA++SAA QY++PY G T+GEYFRD
Sbjct: 193 CVYVAIGQKASTIANVVAKLEEHGAMDYTIVVAATASESAAMQYLAPYAGATMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 253 GQDSLIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNAEYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G++TA PIIET GDVT+F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TKGEIKGKTGSMTALPIIETQAGDVTAFVPTNVISITDGQIFLETDLFNAGIRPAINPGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKL G +R+ LAQYR L +F++F+SDLD VT+ QL G ++ LMK
Sbjct: 373 SVSRVGGAAQTKVIKKLGGGVRLALAQYRALAAFAQFASDLDEVTRKQLERGRMVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRI--INLKNNISINK 581
Q ++ + E ++L + N ++ + + E + +Y + +L N+I K
Sbjct: 433 QPQYQPLQVWEEALVLYAVNNGYYDDVAVADAMRVERAMREYLKAHYADLVNSIESRK 490
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 154/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G GI V TG+ + PVG+ +GR++N LG PID KG IN+K +
Sbjct: 71 VGAVILGEYEGISEGDTVKTTGRILSVPVGEELIGRVVNALGQPIDGKGPINAKAFDVVE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P ++ + ++TG+K ID + P +G + + G GKT ++ I N +
Sbjct: 131 KVAPGVIDRKSVSQPVQTGLKSIDSMVPIGRGQRELIIGDRQTGKTAVAIDTIINQKGKD 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C V++ +G+++ + +++E +D ++ +E + + G ++ E F
Sbjct: 191 LIC-VYVAIGQKASTIANVVAKLEEHGAMDYTIVVAATASESAAMQYLAPYAGATMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 250 RDRGQDSLIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNAEYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D+T P+ + D I L + GI PAI+
Sbjct: 310 EKFTKGEIKGKTGSMTALPIIETQAGDVTAFVPTNVISITDGQIFLETDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
P S S+ + G KV + V+ L +Y+ L
Sbjct: 370 PGISVSR-----VGGAAQTKVIKKLGGGVRLALAQYRAL 403
>gi|381153564|ref|ZP_09865433.1| ATP synthase, F1 beta subunit [Methylomicrobium album BG8]
gi|380885536|gb|EIC31413.1| ATP synthase, F1 beta subunit [Methylomicrobium album BG8]
Length = 467
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/366 (64%), Positives = 291/366 (79%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + K + +N+++ + +VQQQ+G+ + RTIA G+T+G+ R V +T
Sbjct: 13 VVDVEFAREELPKVYDALNVESAGLVLEVQQQLGDGVARTIAMGSTDGLSRGMAVTNTKA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI+NVLG PID +G I K IH P +++Q N +LETGIKVI
Sbjct: 73 PISVPVGLETLGRIMNVLGQPIDERGPIGEKTSWGIHREAPSYADQASGNELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLICPFSKGGKVGLFGGAGVGKTVNMMELINNIATAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
+E+ V++ KV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR
Sbjct: 193 QEAGVINADDLTQSKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLFFVDNIYR 252
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 253 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDP 312
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLD+T+VLSRQIAELGIYPAIDPL+S S+QLDP ++G+EHY VA +V+ LQ+
Sbjct: 313 SPATTFAHLDATVVLSRQIAELGIYPAIDPLDSTSRQLDPLVIGQEHYTVARKVQSILQR 372
Query: 907 YKELKD 912
YKEL+D
Sbjct: 373 YKELRD 378
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 145/334 (43%), Gaps = 30/334 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G T+ +PVG E LGRI+N G+ ID + K + + AP D+
Sbjct: 60 GLSRGMAVTNTKAPISVPVGLETLGRIMNVLGQPIDERGPIGEKTSWGIHREAPSYADQA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCIG 294
S NE L TGIK ID + P KG + + G GKT ++ I N + + ++ +G
Sbjct: 120 SGNELLETGIKVIDLICPFSKGGKVGLFGGAGVGKTVNMMELINNIATAHSGLSVFAGVG 179
Query: 295 QKI---SSLINVINKLKYYNCMDYT----VVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
++ + + + + N D T +V + + TG T+ EYFRD
Sbjct: 180 ERTREGNDFYHEMQEAGVINADDLTQSKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDE 239
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D L D++ ++ A ++S LL R P V Y L E + ++
Sbjct: 240 GRDVLFFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QE 286
Query: 408 KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSV 467
+I + G++T+ + D+T P + D + L + PAI+ S
Sbjct: 287 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAIDPLDST 346
Query: 468 SR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
SR V G Y + +K ++ +L +Y+EL
Sbjct: 347 SRQLDPLVIGQEHYTVARK----VQSILQRYKEL 376
>gi|186477773|ref|YP_001859243.1| F0F1 ATP synthase subunit beta [Burkholderia phymatum STM815]
gi|184194232|gb|ACC72197.1| ATP synthase F1, beta subunit [Burkholderia phymatum STM815]
Length = 464
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 238/356 (66%), Positives = 287/356 (80%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + L+ + +VQQQ+G+ +VRTI G+++G++R IV +T KPI
Sbjct: 21 VEFPREHMPKVYDALILEGSELTLEVQQQLGDGVVRTICLGSSDGLRRGVIVKNTAKPIS 80
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G I S IH P F + +LETGIKVIDL+
Sbjct: 81 VPVGKPTLGRIMDVLGRPIDEAGPIASDNMRSIHQKAPAFDELSPSTELLETGIKVIDLI 140
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 141 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 200
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA
Sbjct: 201 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSA 260
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMGKLQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 261 LLGRMPSAVGYQPTLAEEMGKLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLD 320
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+Q+DP+++GEEHY + V+ LQ+YKEL+D
Sbjct: 321 ATVVLSRDIASLGIYPAVDPLDSTSRQIDPHVIGEEHYSITRGVQQTLQRYKELRD 376
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 143/352 (40%), Gaps = 25/352 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T K +PVG LGRI++ G ID N ++ + AP + E L TGI
Sbjct: 75 TAKPISVPVGKPTLGRIMDVLGRPIDEAGPIASDNMRSIHQKAPAFDELSPSTELLETGI 134
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID + P KG + + G GKT ++ I N K ++ +G++ +
Sbjct: 135 KVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFY 194
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
+++K N +D +V + + TG T+ E+FRD G D L D++ + A
Sbjct: 195 HEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLA 254
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P V Y L E K+ +++I + G++T+ +
Sbjct: 255 GTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKTGSITSVQAVY 301
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P D + L ++ + PA++ S SR V G Y I
Sbjct: 302 VPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPHVIGEEHYSIT 361
Query: 480 KKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
+ ++ L +Y+EL +L K + KI + Q H
Sbjct: 362 RG----VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQPFH 409
>gi|217968670|ref|YP_002353904.1| F0F1 ATP synthase subunit alpha [Thauera sp. MZ1T]
gi|217505997|gb|ACK53008.1| ATP synthase F1, alpha subunit [Thauera sp. MZ1T]
Length = 514
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 228/404 (56%), Positives = 312/404 (77%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++T+G T +I E+PVG EL+GR+VN+ G+ ID K K + +EK+
Sbjct: 75 AVVLGEYEHITEGDTVKATGRILEVPVGPELIGRVVNALGQPIDGKGPINAKLTDKIEKV 134
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KS+DSM+PIG+GQRELIIGDRQTGKT +A+D IINQK +++
Sbjct: 135 APGVIARQSVSQPVQTGLKSVDSMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGQDMY 194
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ M+YT+VVAATA++SAA QY++ Y GCT+GEYFRD
Sbjct: 195 CVYVAIGQKASTVANVVRKLEENGAMEYTIVVAATASESAAMQYLAAYAGCTMGEYFRDR 254
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G D LI+YDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 255 GMDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEKF 314
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA P+IET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 315 TNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGI 374
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K+VKKLSG IR LAQYREL +F++F+SDLD T+ QL G +++ LMK
Sbjct: 375 SVSRVGGAAQTKVVKKLSGGIRTDLAQYRELAAFAQFASDLDDATRKQLERGRRVTELMK 434
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q + SI ++ I+L + N +F + + ++ FE +I++ +
Sbjct: 435 QAQYSPMSIADMAIVLYAVNNGYFDDVDVGRVLAFESAMIQFVK 478
Score = 109 bits (273), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 152/339 (44%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I V TG+ + PVG +GR++N LG PID KG IN+K I
Sbjct: 73 VGAVVLGEYEHITEGDTVKATGRILEVPVGPELIGRVVNALGQPIDGKGPINAKLTDKIE 132
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K +D + P +G + + G GKT ++ I N +
Sbjct: 133 KVAPGVIARQSVSQPVQTGLKSVDSMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGQD 192
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C V++ +G+++ + +++E+ ++ ++ +E + + A G ++ E F
Sbjct: 193 MYC-VYVAIGQKASTVANVVRKLEENGAMEYTIVVAATASESAAMQYLAAYAGCTMGEYF 251
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G D L+ D++ + A +VS +L R P Y + +L ER +
Sbjct: 252 RDRGMDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYV 311
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 312 EKFTNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAIN 371
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G KV + ++ L +Y+EL
Sbjct: 372 AGISVSR-----VGGAAQTKVVKKLSGGIRTDLAQYREL 405
>gi|78486502|ref|YP_392427.1| F0F1 ATP synthase subunit beta [Thiomicrospira crunogena XCL-2]
gi|118573773|sp|Q31DM0.1|ATPB_THICR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|78364788|gb|ABB42753.1| ATP synthase F1, beta subunit [Thiomicrospira crunogena XCL-2]
Length = 459
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 233/360 (64%), Positives = 291/360 (80%)
Query: 553 PIKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTG 612
P+ +E ++ K + + + +VQQQ+G+N+VR IA G+++G+KR V +TG
Sbjct: 11 PVIDVEFKGADLPKIYDALKVDELDLTLEVQQQVGDNVVRAIAMGSSDGLKRGMAVSNTG 70
Query: 613 KPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKV 672
+ I PVG TLGRI +VLG+PIDN G + S++K IH P F + +LETG+KV
Sbjct: 71 EAISVPVGKPTLGRIFDVLGNPIDNAGPVESEEKMTIHRPAPAFDELAASQELLETGVKV 130
Query: 673 IDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHE 732
IDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFY+E
Sbjct: 131 IDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYYE 190
Query: 733 MKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGT 792
M+ES VLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G+D+L F+DNIYR+TLAGT
Sbjct: 191 MEESGVLDKVALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDILFFVDNIYRYTLAGT 250
Query: 793 EVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTF 852
EVSA+LGR PSAVGYQPTL++EMG++QERI+STK G+ITS+QA+YVPADDLTDP+P+TTF
Sbjct: 251 EVSALLGRMPSAVGYQPTLSQEMGQIQERITSTKTGSITSIQAVYVPADDLTDPAPATTF 310
Query: 853 THLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
HLD+T+VL+R IAE GIYPAIDPL+S S+QLDP +VG EHY A V+ LQ+YKELKD
Sbjct: 311 AHLDATVVLNRSIAETGIYPAIDPLDSTSRQLDPLVVGSEHYDTARGVQETLQRYKELKD 370
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 144/336 (42%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L +G T + +PVG LGRI + G IDN + + T+ +
Sbjct: 51 AIAMGSSDGLKRGMAVSNTGEAISVPVGKPTLGRIFDVLGNPIDNAGPVESEEKMTIHRP 110
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP + + E L TG+K ID + P KG + + G GKT ++ I N +
Sbjct: 111 APAFDELAASQELLETGVKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSG 170
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++ +D +V + + TG T+ EYFRD
Sbjct: 171 YSVFAGVGERTREGNDFYYEMEESGVLDKVALVYGQMNEPPGNRLRVALTGLTMAEYFRD 230
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L D++ ++ A ++S LL R P + L + +I +
Sbjct: 231 EGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLSQEMGQI------Q 277
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L+ ++ + PAI+ S
Sbjct: 278 ERITSTKTGSITSIQAVYVPADDLTDPAPATTFAHLDATVVLNRSIAETGIYPAIDPLDS 337
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G+ Y + ++ L +Y+EL+
Sbjct: 338 TSRQLDPLVVGSEHYDTARG----VQETLQRYKELK 369
>gi|188993189|ref|YP_001905199.1| ATP synthase F0F1 subunit beta [Xanthomonas campestris pv.
campestris str. B100]
gi|190358711|sp|B0RWC2.1|ATPB_XANCB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|167734949|emb|CAP53161.1| ATP synthase beta chain [Xanthomonas campestris pv. campestris]
Length = 468
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/362 (64%), Positives = 286/362 (79%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + + ++ +VQQQ+G+ +VRTIA G+T+G+KRN + +T + I
Sbjct: 16 VEFQRNEVPKVYHALKVEGTAITLEVQQQLGDGVVRTIALGSTDGLKRNLLATNTERAIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G++ + IH P + +Q + +LETGIKVIDL+
Sbjct: 76 VPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRAAPSYEDQSSSTELLETGIKVIDLM 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
NVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLF+DNIYR+TLA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKGKDVLLFVDNIYRYTLA 255
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+T
Sbjct: 256 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPAT 315
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLDST+ LSR IA LGIYPA+DPL+S S+Q+DP ++G EHY A V+ LQKYKEL
Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375
Query: 911 KD 912
KD
Sbjct: 376 KD 377
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 140/324 (43%), Gaps = 29/324 (8%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
TE+ +PVG LGRI++ G ID + + + AP D+ S E L TGI
Sbjct: 70 TERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRAAPSYEDQSSSTELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 130 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDL 358
+++K N +D +V + + TG T+ EYFRD G+D L+ D++
Sbjct: 190 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKGKDVLLFVDNI 249
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P + + L ER I + +G++T
Sbjct: 250 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQER-------------ITSTKSGSIT 296
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L N+ + PA++ S SR V G
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGH 356
Query: 474 AQYKIVKKLSGDIRIMLAQYRELE 497
Y ++ ++ L +Y+EL+
Sbjct: 357 EHYDTAQR----VQQTLQKYKELK 376
>gi|27904521|ref|NP_777647.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
gi|32171341|sp|Q89B39.1|ATPB_BUCBP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|27903918|gb|AAO26752.1| ATP synthase beta chain [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 465
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/363 (68%), Positives = 289/363 (79%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKN--NISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + ++ K F + + N +I I +VQQQ+G IVRTIA G++NG+KR +VVD
Sbjct: 16 VEFSQQSVPKIFNALKVDNQGSILILEVQQQLGSGIVRTIAMGSSNGLKRGLLVVDLEHG 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSKKKS-----PIHTLPPKFSNQIFNNNILETG 669
I PVG TLGRI+NVLG PID KG + + S IH P +S Q+ + +LETG
Sbjct: 76 IKVPVGTATLGRIVNVLGQPIDMKGPLKNHDNSDIEYWEIHRKAPSYSEQLTSYEVLETG 135
Query: 670 IKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDF 729
IKVIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDF
Sbjct: 136 IKVIDLICPFSKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFTGVGERTREGNDF 195
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
YHEM +S VLDKVSL+YGQMNEP GNRLRVA TGL+IAE+FRN G DVLLFIDNIYR+TL
Sbjct: 196 YHEMSDSRVLDKVSLVYGQMNEPPGNRLRVAFTGLTIAEKFRNEGHDVLLFIDNIYRYTL 255
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AGTEVSA+LGR PSAVGYQPTL+EEMG LQERI+ST G+ITS+QA+YVPADDLTDPSP+
Sbjct: 256 AGTEVSALLGRIPSAVGYQPTLSEEMGVLQERITSTNKGSITSIQAVYVPADDLTDPSPA 315
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF+HLDSTI LSRQI LGIYPAIDPL S S+QLDP IVG+ HY VA V+ LQ+Y+E
Sbjct: 316 TTFSHLDSTITLSRQIVSLGIYPAIDPLNSTSRQLDPRIVGQLHYDVALGVRSILQRYQE 375
Query: 910 LKD 912
LKD
Sbjct: 376 LKD 378
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 144/333 (43%), Gaps = 30/333 (9%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRET-------VEKIAP 229
L +G E ++PVG LGRIVN G+ ID K +KN + + + AP
Sbjct: 63 LKRGLLVVDLEHGIKVPVGTATLGRIVNVLGQPIDMKGP--LKNHDNSDIEYWEIHRKAP 120
Query: 230 GIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-IC 288
++ + E L TGIK ID + P KG + + G GKT ++ I N ++
Sbjct: 121 SYSEQLTSYEVLETGIKVIDLICPFSKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYS 180
Query: 289 IYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLG 348
++ +G++ + +++ +D +V + + +TG TI E FR+ G
Sbjct: 181 VFTGVGERTREGNDFYHEMSDSRVLDKVSLVYGQMNEPPGNRLRVAFTGLTIAEKFRNEG 240
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
D L+ D++ ++ A ++S LL R P + + L ER + NK
Sbjct: 241 HDVLLFIDNIYRYTLAGTEVSALLGRIPSAVGYQPTLSEEMGVLQERITSTNK------- 293
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
G++T+ + D+T P S D I L + + PAI+ S S
Sbjct: 294 ------GSITSIQAVYVPADDLTDPSPATTFSHLDSTITLSRQIVSLGIYPAIDPLNSTS 347
Query: 469 RVGGAAQYKIVKKLSGD----IRIMLAQYRELE 497
R +IV +L D +R +L +Y+EL+
Sbjct: 348 R---QLDPRIVGQLHYDVALGVRSILQRYQELK 377
>gi|375335424|ref|ZP_09776768.1| F0F1 ATP synthase subunit beta [Succinivibrionaceae bacterium WG-1]
Length = 468
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/334 (70%), Positives = 278/334 (83%)
Query: 579 INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNK 638
I +VQQQIG +VR I G + G+ R V DT + I PVG TLGRI+NVLGDP+D +
Sbjct: 48 ILEVQQQIGGGVVRCITMGTSEGLARGVEVEDTKEAIKVPVGKQTLGRIMNVLGDPVDEQ 107
Query: 639 GEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVN 698
G IN +++ IH P + +Q +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVN
Sbjct: 108 GPINEEERWVIHRAAPSYEDQSSATELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVN 167
Query: 699 MMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLR 758
MMELI NIA H G SVF GVGER+REGNDFY+EMK +NVLDKVS+IYGQMNEP GNRLR
Sbjct: 168 MMELINNIAKAHSGLSVFTGVGERTREGNDFYYEMKAANVLDKVSMIYGQMNEPPGNRLR 227
Query: 759 VALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKL 818
VALTGL++AE+FR+ GKDVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG L
Sbjct: 228 VALTGLTVAEKFRDEGKDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVL 287
Query: 819 QERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLE 878
QERI+STK+G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+
Sbjct: 288 QERITSTKHGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGIYPAVDPLD 347
Query: 879 SYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S S+QLDP +VG+EHY+ A V+ LQ+YKELKD
Sbjct: 348 STSRQLDPLVVGKEHYETARGVQSILQRYKELKD 381
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 165/371 (44%), Gaps = 29/371 (7%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + T++ ++PVG + LGRI+N G+ +D + + R + + AP D+
Sbjct: 69 EGLARGVEVEDTKEAIKVPVGKQTLGRIMNVLGDPVDEQGPINEEERWVIHRAAPSYEDQ 128
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +
Sbjct: 129 SSATELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTGV 188
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + ++K N +D ++ + + TG T+ E FRD G+D L+
Sbjct: 189 GERTREGNDFYYEMKAANVLDKVSMIYGQMNEPPGNRLRVALTGLTVAEKFRDEGKDVLL 248
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 249 FIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTK 295
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
+G++T+ + D+T P + D + L N+ PA++ S SR
Sbjct: 296 HGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGIYPAVDPLDSTSRQLDP 355
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQL--YNGEKISLLMKQ 526
V G Y+ + ++ +L +Y+EL+ ++ + QL KI + Q
Sbjct: 356 LVVGKEHYETAR----GVQSILQRYKELKDIMAILGQDELSEQDQLIVARARKIERFLSQ 411
Query: 527 KPHENYSIVEL 537
+S+ E+
Sbjct: 412 P----FSVAEV 418
>gi|88797167|ref|ZP_01112757.1| ATP synthase subunit B [Reinekea blandensis MED297]
gi|88780036|gb|EAR11221.1| ATP synthase subunit B [Reinekea sp. MED297]
Length = 466
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/366 (64%), Positives = 290/366 (79%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E ++ K + + + N +VQQQ+G+ +VRTIA G T G+KR V +TG+
Sbjct: 13 VVDVEFPRDSVPKVYDALKIDANGITLEVQQQLGDGVVRTIAMGTTEGLKRGLDVSNTGE 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
I PVG TLGRI+NVLG+PID +GEI + ++S IH P ++ Q + ILETGIKVI
Sbjct: 73 GIAVPVGTGTLGRIMNVLGEPIDERGEIQTDERSVIHADAPSYAEQAHSQEILETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNM+ELI NIA EH G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLVCPFAKGGKVGLFGGAGVGKTVNMLELINNIATEHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
++ V+ KV+++YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR
Sbjct: 193 SDAGVIQLEKLEESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYR 252
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STKNG+ITSVQA+YVPADDLTDP
Sbjct: 253 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKNGSITSVQAVYVPADDLTDP 312
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP I+G +HY A V+ LQK
Sbjct: 313 SPATTFAHLDATVVLSRDIAALGIYPAVDPLDSSSRQLDPQIIGNDHYNTARGVQGVLQK 372
Query: 907 YKELKD 912
YKELKD
Sbjct: 373 YKELKD 378
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 142/336 (42%), Gaps = 30/336 (8%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T + +PVG LGRI+N GE ID + + R + AP ++
Sbjct: 59 EGLKRGLDVSNTGEGIAVPVGTGTLGRIMNVLGEPIDERGEIQTDERSVIHADAPSYAEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
E L TGIK ID + P KG + + G GKT ++ I N ++ + ++ +
Sbjct: 119 AHSQEILETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMLELINNIATEHSGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISP-------YTGCTIGEYFRD 346
G++ + +++ + + + A + P TG T+ E FRD
Sbjct: 179 GERTREGNDFYHEMSDAGVIQLEKLEESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRD 238
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L D++ ++ A ++S LL R P V Y L E + +
Sbjct: 239 EGRDVLFFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------Q 285
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + NG++T+ + D+T P + D + L ++ PA++ S
Sbjct: 286 ERITSTKNGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIAALGIYPAVDPLDS 345
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR + G Y + + G +L +Y+EL+
Sbjct: 346 SSRQLDPQIIGNDHYNTARGVQG----VLQKYKELK 377
>gi|264676472|ref|YP_003276378.1| ATP synthase F1 subunit beta [Comamonas testosteroni CNB-2]
gi|299531206|ref|ZP_07044617.1| F0F1 ATP synthase subunit beta [Comamonas testosteroni S44]
gi|418532988|ref|ZP_13098877.1| F0F1 ATP synthase subunit beta [Comamonas testosteroni ATCC 11996]
gi|262206984|gb|ACY31082.1| ATP synthase F1, beta subunit [Comamonas testosteroni CNB-2]
gi|298720789|gb|EFI61735.1| F0F1 ATP synthase subunit beta [Comamonas testosteroni S44]
gi|371449851|gb|EHN62914.1| F0F1 ATP synthase subunit beta [Comamonas testosteroni ATCC 11996]
Length = 469
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/363 (64%), Positives = 290/363 (79%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + + L+ + +VQQQ+G+ +VRTIA G+++G+KR +V +TG PI
Sbjct: 18 VEFAHGQVPKVYDALKLEGSALTLEVQQQLGDGVVRTIALGSSDGLKRGLMVTNTGNPIT 77
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG+PID +G ++ + IH P + + +LETGIKVIDL+
Sbjct: 78 VPVGKATLGRIMDVLGNPIDERGPVDQTLTAAIHRKAPAYDELSPSQELLETGIKVIDLV 137
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM ++
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMSDA 197
Query: 737 NVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
V++ KV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVL F+DNIYR+TL
Sbjct: 198 GVVNQENLGESKVAMVYGQMNEPPGNRLRVALTGLTMAESFRDEGKDVLFFVDNIYRYTL 257
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AGTEVSA+LGR PSAVGYQPTLAEEMGKLQERI+STK G+ITS+QA+YVPADDLTDPSP+
Sbjct: 258 AGTEVSALLGRMPSAVGYQPTLAEEMGKLQERITSTKVGSITSIQAVYVPADDLTDPSPA 317
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLDST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHYKVA +V+ LQ+YKE
Sbjct: 318 TTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGEEHYKVARQVQGTLQRYKE 377
Query: 910 LKD 912
L+D
Sbjct: 378 LRD 380
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 159/392 (40%), Gaps = 50/392 (12%)
Query: 132 RCLNQTLNIKFANNTV--------LSGQINGTTGYEEAAAQGFV-AVLIDDLKNLTQGQK 182
+C+ ++++FA+ V L G T ++ G V + + L +G
Sbjct: 10 QCIGAVVDVEFAHGQVPKVYDALKLEGSAL-TLEVQQQLGDGVVRTIALGSSDGLKRGLM 68
Query: 183 CFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLL 242
T +PVG LGRI++ G ID + + + AP + E L
Sbjct: 69 VTNTGNPITVPVGKATLGRIMDVLGNPIDERGPVDQTLTAAIHRKAPAYDELSPSQELLE 128
Query: 243 TGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLI 301
TGIK ID + P KG + + G GKT ++ I N K + + ++ +G++
Sbjct: 129 TGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGN 188
Query: 302 NVINKLKYYNCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGEYFRDLGQ 349
+ Y+ D VV +S Q P TG T+ E FRD G+
Sbjct: 189 DF-----YHEMSDAGVVNQENLGESKVAMVYGQMNEPPGNRLRVALTGLTMAESFRDEGK 243
Query: 350 DCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKI 409
D L D++ ++ A ++S LL R P V Y L E K+ +++I
Sbjct: 244 DVLFFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERI 290
Query: 410 FNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 291 TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSR 350
Query: 470 -----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G YK+ +++ G L +Y+EL
Sbjct: 351 QLDPQVVGEEHYKVARQVQG----TLQRYKEL 378
>gi|32490757|ref|NP_871011.1| F0F1 ATP synthase subunit beta [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|81844477|sp|Q8D3J3.1|ATPB_WIGBR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|25165963|dbj|BAC24154.1| atpD [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 462
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 247/356 (69%), Positives = 292/356 (82%), Gaps = 3/356 (0%)
Query: 560 FEINIIKYFRI---INLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
FEI+ I I +KN I +V QQIG+ IVR I G+++G+KR V + K I
Sbjct: 18 FEISFIPKINFALEIKIKNKKLIMEVMQQIGDGIVRCILMGSSDGLKRGLKVFNLNKGIE 77
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLGDPID KG+I S + PIH P ++ ++ +LETGIK+IDL+
Sbjct: 78 VPVGKPTLGRIMNVLGDPIDRKGKILSSEYRPIHNKSPSYNEISSSDELLETGIKIIDLI 137
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGKIGLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFY+EM S
Sbjct: 138 CPFAKGGKIGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFSGVGERTREGNDFYNEMISS 197
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G DVL F+DNIYR+TLAGTEVSA
Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTLAEKFRDEGNDVLFFVDNIYRYTLAGTEVSA 257
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTL+EEMG LQERI+STK+G+ITSVQAIYVPADDLTDPSP+TTF HLD
Sbjct: 258 LLGRIPSAVGYQPTLSEEMGILQERITSTKSGSITSVQAIYVPADDLTDPSPATTFVHLD 317
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSRQIA LGIYPAIDPL+S S+QLDP IVGE+HY VA +++ LQ+YK+LKD
Sbjct: 318 ATVVLSRQIASLGIYPAIDPLDSTSRQLDPLIVGEDHYLVARKIQSILQRYKDLKD 373
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 143/336 (42%), Gaps = 23/336 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
+L+ L +G K F K E+PVG LGRI+N G+ ID K K L +
Sbjct: 54 CILMGSSDGLKRGLKVFNLNKGIEVPVGKPTLGRIMNVLGDPIDRKGKILSSEYRPIHNK 113
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
+P + S +E L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 114 SPSYNEISSSDELLETGIKIIDLICPFAKGGKIGLFGGAGVGKTVNMMELIRNIAIEHSG 173
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + N++ N +D +V + + TG T+ E FRD
Sbjct: 174 YSVFSGVGERTREGNDFYNEMISSNVIDKVSLVYGQMNEPPGNRLRVALTGLTLAEKFRD 233
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G D L D++ ++ A ++S LL R P + + L ER
Sbjct: 234 EGNDVLFFVDNIYRYTLAGTEVSALLGRIPSAVGYQPTLSEEMGILQER----------- 282
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
I + +G++T+ I D+T P D + L + + PAI+ S
Sbjct: 283 --ITSTKSGSITSVQAIYVPADDLTDPSPATTFVHLDATVVLSRQIASLGIYPAIDPLDS 340
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR + G Y + +K I+ +L +Y++L+
Sbjct: 341 TSRQLDPLIVGEDHYLVARK----IQSILQRYKDLK 372
>gi|374313784|ref|YP_005060213.1| ATP synthase b chain [Serratia symbiotica str. 'Cinara cedri']
gi|363988010|gb|AEW44201.1| ATP synthase b chain [Serratia symbiotica str. 'Cinara cedri']
Length = 460
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/358 (67%), Positives = 293/358 (81%), Gaps = 2/358 (0%)
Query: 557 IELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKP 614
+E + + K + + ++NN + +VQQQ+G IVR IA G+++G++R V + P
Sbjct: 16 VEFPQNAVPKVYDALEVENNTKKLVLEVQQQLGGGIVRCIAMGSSDGLRRGLTVNNLKHP 75
Query: 615 ILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVID 674
I PVG TLGRI+NVLG+PID KG+I K++ IH P + + +LETGIKV+D
Sbjct: 76 IKVPVGKATLGRIMNVLGEPIDMKGDIGEKERWNIHRSAPSYEELTSSQELLETGIKVMD 135
Query: 675 LLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMK 734
L+CPF+KGGK+GLFGGAGVGKTVNMMELIRNIAIE+ G SVF GVGER+REGNDFYHEMK
Sbjct: 136 LICPFVKGGKVGLFGGAGVGKTVNMMELIRNIAIEYSGYSVFAGVGERTREGNDFYHEMK 195
Query: 735 ESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEV 794
SNVLDKVSL+YGQMNEP GNRLRVALTGL+IAE+FR+ G++VLLFIDNIYR+ LAGTEV
Sbjct: 196 ASNVLDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRNVLLFIDNIYRYILAGTEV 255
Query: 795 SAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTH 854
SA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF H
Sbjct: 256 SALLGRMPSAVGYQPTLAEEMGILQERITSTKIGSITSVQAVYVPADDLTDPSPATTFAH 315
Query: 855 LDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LD+T+VLSR IA LGIYPA++PLES S+QLDP +VG+EHY VA V+ LQ+Y+ELKD
Sbjct: 316 LDATVVLSRNIASLGIYPAVNPLESTSRQLDPTLVGQEHYDVARGVQSILQRYQELKD 373
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 140/313 (44%), Gaps = 23/313 (7%)
Query: 191 EIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDS 250
++PVG LGRI+N GE ID K K R + + AP + S E L TGIK +D
Sbjct: 77 KVPVGKATLGRIMNVLGEPIDMKGDIGEKERWNIHRSAPSYEELTSSQELLETGIKVMDL 136
Query: 251 MIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKY 309
+ P KG + + G GKT ++ I N + ++ +G++ + +++K
Sbjct: 137 ICPFVKGGKVGLFGGAGVGKTVNMMELIRNIAIEYSGYSVFAGVGERTREGNDFYHEMKA 196
Query: 310 YNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQIS 369
N +D +V + + TG TI E FRD G++ L+ D++ ++ A ++S
Sbjct: 197 SNVLDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRNVLLFIDNIYRYILAGTEVS 256
Query: 370 LLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGD 429
LL R P + + + + + +++I + G++T+ + D
Sbjct: 257 ALLGRMPSAVGY-------------QPTLAEEMGILQERITSTKIGSITSVQAVYVPADD 303
Query: 430 VTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSG 484
+T P + D + L N+ + PA+N S SR + G Y + +
Sbjct: 304 LTDPSPATTFAHLDATVVLSRNIASLGIYPAVNPLESTSRQLDPTLVGQEHYDVAR---- 359
Query: 485 DIRIMLAQYRELE 497
++ +L +Y+EL+
Sbjct: 360 GVQSILQRYQELK 372
>gi|399116710|emb|CCG19518.1| ATP synthase subunit beta [Taylorella asinigenitalis 14/45]
Length = 467
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G+ R V T PI PVG+ TLGRI++VLG PID G
Sbjct: 49 EVQQQLGDGVVRTIALGSSDGLSRGMSVDRTNAPISVPVGNGTLGRIMDVLGRPIDEAGP 108
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++K IH PKF + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 109 IEHEEKRSIHQPAPKFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 168
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEM+ESNVLDKV++++GQMNEP GNRLRVA
Sbjct: 169 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVA 228
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+D+LLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 229 LTGLTMAEKFRDEGRDILLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 288
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 289 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIASLGIYPAVDPLDSS 348
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP++VGEEHY VA V+ LQ+YK+L+D
Sbjct: 349 SRQLDPHVVGEEHYTVARAVQQTLQRYKDLRD 380
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 151/362 (41%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G T +PVG LGRI++ G ID + + ++ + AP +
Sbjct: 69 GLSRGMSVDRTNAPISVPVGNGTLGRIMDVLGRPIDEAGPIEHEEKRSIHQPAPKFDELS 128
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 129 PSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 188
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 189 ERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILLF 248
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 249 IDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 295
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 296 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIASLGIYPAVDPLDSSSRQLDPH 355
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y + + ++ L +Y++L +L K + KI + Q
Sbjct: 356 VVGEEHYTVARA----VQQTLQRYKDLRDIIAILGMDELSPEDKQTVARARKIQRFLSQP 411
Query: 528 PH 529
H
Sbjct: 412 FH 413
>gi|319778925|ref|YP_004129838.1| ATP synthase subunit beta [Taylorella equigenitalis MCE9]
gi|397661170|ref|YP_006501870.1| ATP synthase subunit beta [Taylorella equigenitalis ATCC 35865]
gi|317108949|gb|ADU91695.1| ATP synthase beta chain [Taylorella equigenitalis MCE9]
gi|394349349|gb|AFN35263.1| ATP synthase subunit beta [Taylorella equigenitalis ATCC 35865]
Length = 467
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G+ R V T PI PVG+ TLGRI++VLG PID G
Sbjct: 49 EVQQQLGDGVVRTIALGSSDGLSRGMPVERTNAPISVPVGNGTLGRIMDVLGRPIDEAGP 108
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++K IH PKF + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 109 IEHEEKRSIHQPAPKFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 168
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEM+ESNVLDKV++++GQMNEP GNRLRVA
Sbjct: 169 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVA 228
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+D+LLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 229 LTGLTMAEKFRDEGRDILLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 288
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 289 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIASLGIYPAVDPLDSS 348
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP++VGEEHY VA V+ LQ+YK+L+D
Sbjct: 349 SRQLDPHVVGEEHYSVARAVQQTLQRYKDLRD 380
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 151/362 (41%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G T +PVG LGRI++ G ID + + ++ + AP +
Sbjct: 69 GLSRGMPVERTNAPISVPVGNGTLGRIMDVLGRPIDEAGPIEHEEKRSIHQPAPKFDELS 128
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 129 PSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 188
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 189 ERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILLF 248
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 249 IDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 295
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 296 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIASLGIYPAVDPLDSSSRQLDPH 355
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y + + ++ L +Y++L +L K + KI + Q
Sbjct: 356 VVGEEHYSVARA----VQQTLQRYKDLRDIIAILGMDELSPEDKQTVARARKIQRFLSQP 411
Query: 528 PH 529
H
Sbjct: 412 FH 413
>gi|237809867|ref|YP_002894307.1| F0F1 ATP synthase subunit beta [Tolumonas auensis DSM 9187]
gi|259585455|sp|C4LDW0.1|ATPB_TOLAT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|237502128|gb|ACQ94721.1| ATP synthase F1, beta subunit [Tolumonas auensis DSM 9187]
Length = 462
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/334 (70%), Positives = 280/334 (83%)
Query: 579 INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNK 638
+ +VQQQIG +VR IA G ++G++R V +TG+ I PVG TLGRI+NVLG+P+D +
Sbjct: 42 VMEVQQQIGGGVVRCIAMGTSDGLRRGAEVSNTGEAIKVPVGMKTLGRIMNVLGEPVDEQ 101
Query: 639 GEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVN 698
G I ++ IH P + +Q +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVN
Sbjct: 102 GPIGAEDNWVIHREAPSYEDQSSATELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVN 161
Query: 699 MMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLR 758
MMELI NIA H G SVF GVGER+REGNDFY+EMKESNVLDKV+++YGQMNEP GNRLR
Sbjct: 162 MMELINNIAKAHSGLSVFAGVGERTREGNDFYYEMKESNVLDKVAMVYGQMNEPPGNRLR 221
Query: 759 VALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKL 818
VALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG L
Sbjct: 222 VALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVL 281
Query: 819 QERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLE 878
QERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+ LSRQIA LGIYPA+DPL+
Sbjct: 282 QERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIAALGIYPAVDPLD 341
Query: 879 SYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S S+QLDP +VG+EHY+ A V+ LQ+YKELKD
Sbjct: 342 STSRQLDPLVVGQEHYETARGVQTVLQRYKELKD 375
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 146/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T + ++PVG + LGRI+N GE +D + ++ + + AP D+
Sbjct: 64 GLRRGAEVSNTGEAIKVPVGMKTLGRIMNVLGEPVDEQGPIGAEDNWVIHREAPSYEDQS 123
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 124 SATELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 183
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 184 ERTREGNDFYYEMKESNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 243
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 244 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 290
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + PA++ S SR
Sbjct: 291 GSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIAALGIYPAVDPLDSTSRQLDPL 350
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y+ + ++ +L +Y+EL+
Sbjct: 351 VVGQEHYETARG----VQTVLQRYKELK 374
>gi|298370407|ref|ZP_06981723.1| ATP synthase F1, beta subunit [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281867|gb|EFI23356.1| ATP synthase F1, beta subunit [Neisseria sp. oral taxon 014 str.
F0314]
Length = 465
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/345 (68%), Positives = 284/345 (82%), Gaps = 7/345 (2%)
Query: 574 KNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGD 633
+NN+++ +VQQ +G+ +VRTIA G+++G+KR V +TG PI PVG TLGRI++VLG
Sbjct: 34 ENNLTL-EVQQLLGDGVVRTIAMGSSDGLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGT 92
Query: 634 PIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGV 693
P+D G I++ K IH PKF +LETGIKVIDLLCPF KGGK+GLFGGAGV
Sbjct: 93 PVDEAGPIDTNKHRAIHQTAPKFDELSATTELLETGIKVIDLLCPFAKGGKVGLFGGAGV 152
Query: 694 GKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPS 753
GKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+SNVLDKV+++YGQMNEP
Sbjct: 153 GKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPP 212
Query: 754 GNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY 807
GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGY
Sbjct: 213 GNRLRVALTGLTMAEYFRDEKDESGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGY 272
Query: 808 QPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAE 867
QPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA
Sbjct: 273 QPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIAS 332
Query: 868 LGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKYKEL+D
Sbjct: 333 LGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRD 377
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 151/363 (41%), Gaps = 35/363 (9%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G T +PVG LGRIV+ G +D + + AP + +
Sbjct: 61 LKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDTNKHRAIHQTAPKFDELSA 120
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G+
Sbjct: 121 TTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGE 180
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQ 349
+ + +++K N +D +V + + TG T+ EYFRD G+
Sbjct: 181 RTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGKGR 240
Query: 350 DCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKI 409
D L D++ ++ A ++S LL R P + + RL ER I
Sbjct: 241 DVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------I 287
Query: 410 FNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 288 TSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSR 347
Query: 470 -----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLM 524
V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 348 QLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVMR 397
Query: 525 KQK 527
+K
Sbjct: 398 ARK 400
>gi|93007153|ref|YP_581590.1| F0F1 ATP synthase subunit alpha [Psychrobacter cryohalolentis K5]
gi|119367959|sp|Q1Q897.1|ATPA_PSYCK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|92394831|gb|ABE76106.1| ATP synthase F1, alpha subunit [Psychrobacter cryohalolentis K5]
Length = 514
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 236/405 (58%), Positives = 313/405 (77%), Gaps = 4/405 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D L +GQK +CT +I E+PVG ELLGR+V++ G ID K K + VEKI
Sbjct: 74 AVVLGDFLKLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDGKGPINAKMTDKVEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR+SV++P++TG KS+D+MIPIG+GQRELIIGDRQTGKT +AID II QK+ +
Sbjct: 134 APGVIDRQSVDQPVMTGYKSVDTMIPIGRGQRELIIGDRQTGKTAMAIDAIIAQKSSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ ++YT VV A+A++ AA QYI+PY+GCT+GEYFRD
Sbjct: 194 CVYVAIGQKRSTIANVVRKLEQTGALEYTTVVVASASEPAALQYIAPYSGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI++DDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++EK
Sbjct: 254 GEDALIVFDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNAAYVEKF 313
Query: 407 --KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVG 464
++ K G+LTA PIIET GDV++F+PTNVISITDGQIFL+++LFNS RPA+N G
Sbjct: 314 TNGEVVGK-TGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESSLFNSGIRPAVNAG 372
Query: 465 LSVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLM 524
+SVSRVGGAAQ KI+KKLSG IR LAQYREL +F++F+SDLD VT+ QL +GE+++ LM
Sbjct: 373 ISVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFAQFASDLDDVTREQLDHGERVTELM 432
Query: 525 KQKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
KQK ++ SI E ++ F +P+++I FE ++Y
Sbjct: 433 KQKQYQPMSISEQAAVIYASNEGFLADVPVEKIGSFEEAYLRYMH 477
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 151/320 (47%), Gaps = 27/320 (8%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + PVG LGR+++ LG+PID KG IN+K + + P ++ + + TG
Sbjct: 92 TGRILEVPVGPELLGRVVDALGNPIDGKGPINAKMTDKVEKIAPGVIDRQSVDQPVMTGY 151
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCS-VFIGVGERSREGNDF 729
K +D + P +G + + G GKT ++ I IA + G V++ +G++ +
Sbjct: 152 KSVDTMIPIGRGQRELIIGDRQTGKTAMAIDAI--IAQKSSGIKCVYVAIGQKRSTIANV 209
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
+++++ L+ +++ +EP+ + +G ++ E FR+ G+D L+ D++ + +
Sbjct: 210 VRKLEQTGALEYTTVVVASASEPAALQYIAPYSGCTMGEYFRDRGEDALIVFDDLSKQAV 269
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST---------------KNGTITSVQ 834
A ++S +L R P Y + +L ER S K G++T++
Sbjct: 270 AYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNAAYVEKFTNGEVVGKTGSLTALP 329
Query: 835 AIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHY 894
I A D++ P+ + D I L + GI PA++ S S+ + G
Sbjct: 330 IIETQAGDVSAFVPTNVISITDGQIFLESSLFNSGIRPAVNAGISVSR-----VGGAAQT 384
Query: 895 KV----ANEVKFYLQKYKEL 910
K+ + ++ L +Y+EL
Sbjct: 385 KIIKKLSGGIRTALAQYREL 404
>gi|421568498|ref|ZP_16014221.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM3001]
gi|402341440|gb|EJU76619.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM3001]
Length = 465
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/365 (64%), Positives = 287/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + + L N +VQQ +G+ +VRTIA G+++G+KR V +TG
Sbjct: 13 VVDVEFPRDMIPRVYDALKLDENGLTLEVQQLLGDGVVRTIAMGSSDGLKRGMTVSNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG P+D G I++ K IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKGTLGRIVDVLGTPVDEAGRIDTDKSRAIHQAAPKFDELSSTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 152/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRIV+ G +D + + + AP +
Sbjct: 60 GLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGRIDTDKSRAIHQAAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 STTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|221069420|ref|ZP_03545525.1| ATP synthase F1, beta subunit [Comamonas testosteroni KF-1]
gi|220714443|gb|EED69811.1| ATP synthase F1, beta subunit [Comamonas testosteroni KF-1]
Length = 469
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/363 (64%), Positives = 290/363 (79%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + + L+ +VQQQ+G+ +VRTIA G+++G+KR +V +TG PI
Sbjct: 18 VEFAHGQVPKVYDALKLEGTALTLEVQQQLGDGVVRTIALGSSDGLKRGLMVTNTGNPIT 77
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG+PID +G+++ +PIH P + + +LETGIKVIDL+
Sbjct: 78 VPVGKATLGRIMDVLGNPIDERGDVDQALTAPIHRKAPAYDELSPSQELLETGIKVIDLI 137
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
PF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM ++
Sbjct: 138 SPFAKGGKVGLFGGAGVGKTVNMMELINNIAKGHGGLSVFAGVGERTREGNDFYHEMSDA 197
Query: 737 NVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
V++ KV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVL F+DNIYR+TL
Sbjct: 198 GVVNQANLNESKVAMVYGQMNEPPGNRLRVALTGLTMAEAFRDEGKDVLFFVDNIYRYTL 257
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AGTEVSA+LGR PSAVGYQPTLAEEMGKLQERI+STK G+ITS+QA+YVPADDLTDPSP+
Sbjct: 258 AGTEVSALLGRMPSAVGYQPTLAEEMGKLQERITSTKVGSITSIQAVYVPADDLTDPSPA 317
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLDST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHYKVA +V+ LQ+YKE
Sbjct: 318 TTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGEEHYKVARQVQGTLQRYKE 377
Query: 910 LKD 912
L+D
Sbjct: 378 LRD 380
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 161/391 (41%), Gaps = 48/391 (12%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+C+ ++++FA+ V + ++ GT E Q G V + + L +G
Sbjct: 10 QCIGAVVDVEFAHGQVPKVYDALKLEGTALTLEVQQQLGDGVVRTIALGSSDGLKRGLMV 69
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T +PVG LGRI++ G ID + + + AP + E L T
Sbjct: 70 TNTGNPITVPVGKATLGRIMDVLGNPIDERGDVDQALTAPIHRKAPAYDELSPSQELLET 129
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + ++ +G++ +
Sbjct: 130 GIKVIDLISPFAKGGKVGLFGGAGVGKTVNMMELINNIAKGHGGLSVFAGVGERTREGND 189
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGEYFRDLGQD 350
Y+ D VV A +S Q P TG T+ E FRD G+D
Sbjct: 190 F-----YHEMSDAGVVNQANLNESKVAMVYGQMNEPPGNRLRVALTGLTMAEAFRDEGKD 244
Query: 351 CLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIF 410
L D++ ++ A ++S LL R P V Y L E K+ +++I
Sbjct: 245 VLFFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERIT 291
Query: 411 NKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR- 469
+ G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 292 STKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQ 351
Query: 470 ----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G YK+ +++ G L +Y+EL
Sbjct: 352 LDPQVVGEEHYKVARQVQG----TLQRYKEL 378
>gi|294624654|ref|ZP_06703325.1| ATP synthase subunit B [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292601048|gb|EFF45114.1| ATP synthase subunit B [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 468
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/362 (64%), Positives = 286/362 (79%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K +R + + +VQQQ+G+ +VRTIA G+T+G+KRN + +T + I
Sbjct: 16 VEFPRNEVPKVYRALKVDGTEITLEVQQQLGDGVVRTIALGSTDGLKRNLVATNTERAIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G++ + IH P + +Q + +LETGIKVIDL+
Sbjct: 76 VPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRGAPSYEDQSSSTELLETGIKVIDLM 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
NVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLF+DNIYR+TLA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKGKDVLLFVDNIYRYTLA 255
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+T
Sbjct: 256 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPAT 315
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLDST+ LSR IA LGIYPA+DPL+S S+Q+DP ++G EHY A V+ LQKYKEL
Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375
Query: 911 KD 912
KD
Sbjct: 376 KD 377
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 140/324 (43%), Gaps = 29/324 (8%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
TE+ +PVG LGRI++ G ID + + + AP D+ S E L TGI
Sbjct: 70 TERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRGAPSYEDQSSSTELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 130 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDL 358
+++K N +D +V + + TG T+ EYFRD G+D L+ D++
Sbjct: 190 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKGKDVLLFVDNI 249
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P + + L ER I + +G++T
Sbjct: 250 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQER-------------ITSTKSGSIT 296
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L N+ + PA++ S SR V G
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGH 356
Query: 474 AQYKIVKKLSGDIRIMLAQYRELE 497
Y ++ ++ L +Y+EL+
Sbjct: 357 EHYDTAQR----VQQTLQKYKELK 376
>gi|374365865|ref|ZP_09623951.1| F0F1 ATP synthase subunit alpha [Cupriavidus basilensis OR16]
gi|373102519|gb|EHP43554.1| F0F1 ATP synthase subunit alpha [Cupriavidus basilensis OR16]
Length = 513
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 236/412 (57%), Positives = 310/412 (75%), Gaps = 7/412 (1%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++++G CT +I E+PVG ELLGR+VN+ G+ ID K K + +EK+
Sbjct: 73 AVVLGDYEHISEGDPVKCTGRILEVPVGKELLGRVVNTLGQPIDGKGPINAKESDVIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KSID+M+PIG+GQRELIIGDRQTGKT +A+D IINQK K V
Sbjct: 133 APGVIARQSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGKGVF 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ M+YT+VVAATA+DSAA QY++ Y GCT+GEYFRD
Sbjct: 193 CVYVAIGQKASTVNNVVRKLEELGAMEYTIVVAATASDSAAMQYLAAYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 253 GEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA P+IET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TKGAVTGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGVRPAINAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K+VKKLSG IR LAQYREL +F++F+SDLD T+ QL G +++ L+K
Sbjct: 373 SVSRVGGAAQTKVVKKLSGGIRTDLAQYRELAAFAQFASDLDDATRKQLERGRRVTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINI-----IKYFRIIN 572
Q + + +L L N F + +K I FE + KY +IN
Sbjct: 433 QAQYLPLQVWQLAASLYAANNGFLDNVEVKDILPFEKGLHDHLKTKYADLIN 484
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 156/342 (45%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ I V TG+ + PVG LGR++N LG PID KG IN+K+ I
Sbjct: 71 VGAVVLGDYEHISEGDPVKCTGRILEVPVGKELLGRVVNTLGQPIDGKGPINAKESDVIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GKT ++ I I
Sbjct: 131 KVAPGVIARQSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGKTAVAVDAI----INQ 186
Query: 711 KGCSVF---IGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG VF + +G+++ N+ +++E ++ ++ ++ + + A G ++
Sbjct: 187 KGKGVFCVYVAIGQKASTVNNVVRKLEELGAMEYTIVVAATASDSAAMQYLAAYAGCTMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERIS---- 823
E FR+ G+D L+ D++ + A +VS +L R P Y + +L ER +
Sbjct: 247 EYFRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNA 306
Query: 824 -----------STKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
+ K G++T++ I A D++ P+ + D I L + G+ P
Sbjct: 307 DYVEKFTKGAVTGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGVRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
AI+ S S+ + G KV + ++ L +Y+EL
Sbjct: 367 AINAGISVSR-----VGGAAQTKVVKKLSGGIRTDLAQYREL 403
>gi|255067774|ref|ZP_05319629.1| ATP synthase F1, beta subunit [Neisseria sicca ATCC 29256]
gi|340363783|ref|ZP_08686099.1| ATP synthase F1 sector beta subunit [Neisseria macacae ATCC 33926]
gi|349611178|ref|ZP_08890483.1| ATP synthase subunit beta [Neisseria sp. GT4A_CT1]
gi|419798739|ref|ZP_14324133.1| ATP synthase F1, beta subunit [Neisseria sicca VK64]
gi|255047985|gb|EET43449.1| ATP synthase F1, beta subunit [Neisseria sicca ATCC 29256]
gi|339885012|gb|EGQ74762.1| ATP synthase F1 sector beta subunit [Neisseria macacae ATCC 33926]
gi|348614367|gb|EGY63917.1| ATP synthase subunit beta [Neisseria sp. GT4A_CT1]
gi|385693908|gb|EIG24539.1| ATP synthase F1, beta subunit [Neisseria sicca VK64]
Length = 465
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/365 (64%), Positives = 287/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + + L N +VQQ +G+ +VRTIA G+++G+KR V +TG
Sbjct: 13 VVDVEFPRDAIPRVYDALKLDANGLTLEVQQLLGDGVVRTIAMGSSDGLKRGMTVSNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG P+D G I++ K IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKHRAIHQTAPKFDELSATTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 151/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRIV+ G +D + + AP +
Sbjct: 60 GLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKHRAIHQTAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 ATTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|261253521|ref|ZP_05946094.1| ATP synthase beta chain [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417956026|ref|ZP_12599024.1| F0F1 ATP synthase subunit beta [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260936912|gb|EEX92901.1| ATP synthase beta chain [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342811546|gb|EGU46583.1| F0F1 ATP synthase subunit beta [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 461
Score = 501 bits (1289), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/345 (68%), Positives = 284/345 (82%)
Query: 568 FRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRI 627
R+++ + + + +VQQQ+G IVR I G+++G++R V TG+PI PVG+ TLGRI
Sbjct: 30 LRVVDQEFSALVLEVQQQLGGGIVRCIVMGSSDGLRRGLSVQSTGEPITVPVGEETLGRI 89
Query: 628 LNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGL 687
+NVLG+PID G I K IH P + Q ++ +LETG+KVIDL+CPF KGGKIGL
Sbjct: 90 MNVLGEPIDECGPIGEKMNYGIHRSAPSYEEQSNSSELLETGVKVIDLVCPFAKGGKIGL 149
Query: 688 FGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYG 747
FGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFY+EMKE+ VLDKV+++YG
Sbjct: 150 FGGAGVGKTVNMMELINNIAKAHSGLSVFTGVGERTREGNDFYYEMKEAGVLDKVAMVYG 209
Query: 748 QMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY 807
QMNEP GNRLRVALTGL++AE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGY
Sbjct: 210 QMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY 269
Query: 808 QPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAE 867
QPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA
Sbjct: 270 QPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAA 329
Query: 868 LGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LG+YPAIDPL+S S+QLDP IVG+EHY VA V+ LQ+YKELKD
Sbjct: 330 LGLYPAIDPLDSTSRQLDPMIVGQEHYDVAQNVQMTLQRYKELKD 374
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T + +PVG E LGRI+N GE ID K + + AP ++
Sbjct: 63 GLRRGLSVQSTGEPITVPVGEETLGRIMNVLGEPIDECGPIGEKMNYGIHRSAPSYEEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ +E L TG+K ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 123 NSSELLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + TG T+ E FRD G+D L+
Sbjct: 183 ERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 243 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ PAI+ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPM 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + + ++++ L +Y+EL+
Sbjct: 350 IVGQEHYDVAQ----NVQMTLQRYKELK 373
>gi|21230029|ref|NP_635946.1| ATP synthase F0F1 subunit beta [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66769977|ref|YP_244739.1| ATP synthase F0F1 subunit beta [Xanthomonas campestris pv.
campestris str. 8004]
gi|384426385|ref|YP_005635742.1| ATP synthase F1 subunit beta [Xanthomonas campestris pv. raphani
756C]
gi|81304070|sp|Q4UQF4.1|ATPB_XANC8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|81860399|sp|Q8PCZ5.1|ATPB_XANCP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|21111549|gb|AAM39870.1| ATP synthase beta chain [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66575309|gb|AAY50719.1| ATP synthase beta chain [Xanthomonas campestris pv. campestris str.
8004]
gi|341935485|gb|AEL05624.1| ATP synthase F1, beta subunit [Xanthomonas campestris pv. raphani
756C]
Length = 468
Score = 501 bits (1289), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/362 (64%), Positives = 286/362 (79%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + + ++ +VQQQ+G+ +VRTIA G+T+G+KRN + +T + I
Sbjct: 16 VEFQRNEVPKVYHALKVEGTAITLEVQQQLGDGVVRTIALGSTDGLKRNLLATNTERAIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G++ + IH P + +Q + +LETGIKVIDL+
Sbjct: 76 VPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRAAPSYEDQSSSTELLETGIKVIDLM 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
NVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLF+DNIYR+TLA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLA 255
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+T
Sbjct: 256 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPAT 315
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLDST+ LSR IA LGIYPA+DPL+S S+Q+DP ++G EHY A V+ LQKYKEL
Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375
Query: 911 KD 912
KD
Sbjct: 376 KD 377
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 140/324 (43%), Gaps = 29/324 (8%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
TE+ +PVG LGRI++ G ID + + + AP D+ S E L TGI
Sbjct: 70 TERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRAAPSYEDQSSSTELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 130 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDL 358
+++K N +D +V + + TG T+ EYFRD G+D L+ D++
Sbjct: 190 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNI 249
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P + + L ER I + +G++T
Sbjct: 250 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQER-------------ITSTKSGSIT 296
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L N+ + PA++ S SR V G
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGH 356
Query: 474 AQYKIVKKLSGDIRIMLAQYRELE 497
Y ++ ++ L +Y+EL+
Sbjct: 357 EHYDTAQR----VQQTLQKYKELK 376
>gi|330815046|ref|YP_004358751.1| ATP synthase F1 subunit beta [Burkholderia gladioli BSR3]
gi|327367439|gb|AEA58795.1| ATP synthase F1, beta subunit [Burkholderia gladioli BSR3]
Length = 464
Score = 501 bits (1289), Expect = e-138, Method: Compositional matrix adjust.
Identities = 239/356 (67%), Positives = 285/356 (80%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + L + +VQQQ+G+ IVRTI G ++G++R V +TGKPI
Sbjct: 21 VEFPRDSMPKIYDALTLDGSELTLEVQQQLGDGIVRTICLGASDGLRRGVAVKNTGKPIS 80
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G I S+ IH P F + +LETGIKVIDL+
Sbjct: 81 VPVGKPTLGRIMDVLGRPIDEAGPIESEHLRSIHQKAPAFDELSPSTELLETGIKVIDLV 140
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 141 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 200
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKV+L+YGQMNEP GNRLRVALTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA
Sbjct: 201 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSA 260
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMGKLQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 261 LLGRMPSAVGYQPTLAEEMGKLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLD 320
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+T+VLSR IA LGIYPA+DPL+S S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 321 ATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYTITRGVQQTLQRYKELRD 376
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 147/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID ++ ++ + AP +
Sbjct: 65 GLRRGVAVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPIESEHLRSIHQKAPAFDELS 124
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 125 PSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 184
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 185 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 244
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 245 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 291
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 292 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPN 351
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y I + ++ L +Y+EL +L K + KI + Q
Sbjct: 352 VIGEEHYTITRG----VQQTLQRYKELRDIIAILGMDELSPEDKQTVARARKIQRFLSQP 407
Query: 528 PH 529
H
Sbjct: 408 FH 409
>gi|83649675|ref|YP_438110.1| F0F1 ATP synthase subunit alpha [Hahella chejuensis KCTC 2396]
gi|115312230|sp|Q2S6N9.1|ATPA2_HAHCH RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
synthase F1 sector subunit alpha 2; AltName:
Full=F-ATPase subunit alpha 2
gi|83637718|gb|ABC33685.1| ATP synthase F1, alpha subunit [Hahella chejuensis KCTC 2396]
Length = 514
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/404 (57%), Positives = 307/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D K+L +GQK T +I E+PVG +LLGR+V+ G ID K E VEK+
Sbjct: 74 AVVLGDYKDLAEGQKVRVTGRILEVPVGEQLLGRVVDGLGNPIDGKGALETTLTEPVEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV +P+ TG KS+D+M+PIG+GQREL+IGDRQTGKT +AID IINQK +
Sbjct: 134 APGVIARKSVGQPMQTGYKSVDTMVPIGRGQRELVIGDRQTGKTALAIDAIINQKGTGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ NV+ KL+ + MD+T+VVAA AAD A+ Q+++PY+GCT+GEYFRD
Sbjct: 194 CIYVAIGQKQSSIANVVRKLEEHGAMDHTIVVAAGAADPASMQFLAPYSGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++N+ ++EK
Sbjct: 254 GEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNEEYVEKY 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPA+N G+
Sbjct: 314 TNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSLFNAGIRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQYREL +F++F+SDLD T+ QL +G++++ LMK
Sbjct: 374 SVSRVGGAAQTKIMKKLGGGIRLALAQYRELAAFAQFASDLDEATRKQLEHGQRVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK ++ E+ ++L F + K++ FE ++ Y +
Sbjct: 434 QKQFAPMTVAEMGLVLFAANEGFLDDVDAKKVVPFEAALLSYAK 477
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 151/342 (44%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ + V TG+ + PVG+ LGR+++ LG+PID KG + + P+
Sbjct: 72 VGAVVLGDYKDLAEGQKVRVTGRILEVPVGEQLLGRVVDGLGNPIDGKGALETTLTEPVE 131
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + ++TG K +D + P +G + + G GKT ++ I I
Sbjct: 132 KVAPGVIARKSVGQPMQTGYKSVDTMVPIGRGQRELVIGDRQTGKTALAIDAI----INQ 187
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG + ++ +G++ + +++E +D ++ +P+ + +G ++
Sbjct: 188 KGTGIKCIYVAIGQKQSSIANVVRKLEEHGAMDHTIVVAAGAADPASMQFLAPYSGCTMG 247
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER S
Sbjct: 248 EYFRDRGEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNE 307
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + GI P
Sbjct: 308 EYVEKYTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSLFNAGIRP 367
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
A++ S S+ + G K+ + ++ L +Y+EL
Sbjct: 368 AMNAGISVSR-----VGGAAQTKIMKKLGGGIRLALAQYREL 404
>gi|344168458|emb|CCA80743.1| ATP synthase, F1 sector, beta subunit [blood disease bacterium
R229]
Length = 467
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG I PVG TLGRI++VLG PID G
Sbjct: 48 EVQQQLGDGVVRTIALGSSDGLRRGMAVKGTGAAISVPVGHGTLGRIMDVLGRPIDEAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +K IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IACDEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+ TF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKTGSITSIQAVYVPADDLTDPSPAATFLHLDSTVVLSRDIAALGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG EHY+VA+ VK LQ+YKEL+D
Sbjct: 348 SRQLDPQVVGTEHYEVADRVKKTLQRYKELRD 379
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 138/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID + + + AP +
Sbjct: 68 GLRRGMAVKGTGAAISVPVGHGTLGRIMDVLGRPIDEAGPIACDEKRAIHQKAPKFDELS 127
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 128 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 187
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 188 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 247
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 248 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 294
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 295 GSITSIQAVYVPADDLTDPSPAATFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQ 354
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y++ + ++ L +Y+EL
Sbjct: 355 VVGTEHYEVADR----VKKTLQRYKEL 377
>gi|78049323|ref|YP_365498.1| ATP synthase F0F1 subunit beta [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|118573779|sp|Q3BP15.1|ATPB_XANC5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|78037753|emb|CAJ25498.1| ATP synthase beta chain [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 468
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/362 (64%), Positives = 285/362 (78%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + + ++ +VQQQ+G+ +VRTIA G+T+G+KRN + +T + I
Sbjct: 16 VEFQRNEVPKVYDALKVEGTAITLEVQQQLGDGVVRTIALGSTDGLKRNLVATNTERAIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G++ + IH P + +Q +LETGIKVIDL+
Sbjct: 76 VPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRSAPSYEDQASTTELLETGIKVIDLM 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
NVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLF+DNIYR+TLA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKGKDVLLFVDNIYRYTLA 255
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+T
Sbjct: 256 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPAT 315
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLDST+ LSR IA LGIYPA+DPL+S S+Q+DP ++G EHY A V+ LQKYKEL
Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375
Query: 911 KD 912
KD
Sbjct: 376 KD 377
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 140/324 (43%), Gaps = 29/324 (8%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
TE+ +PVG LGRI++ G ID + + + AP D+ S E L TGI
Sbjct: 70 TERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRSAPSYEDQASTTELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 130 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDL 358
+++K N +D +V + + TG T+ EYFRD G+D L+ D++
Sbjct: 190 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKGKDVLLFVDNI 249
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P + + L ER I + +G++T
Sbjct: 250 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQER-------------ITSTKSGSIT 296
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L N+ + PA++ S SR V G
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGH 356
Query: 474 AQYKIVKKLSGDIRIMLAQYRELE 497
Y ++ ++ L +Y+EL+
Sbjct: 357 EHYDTAQR----VQQTLQKYKELK 376
>gi|121635590|ref|YP_975835.1| F0F1 ATP synthase subunit beta [Neisseria meningitidis FAM18]
gi|161869279|ref|YP_001598446.1| F0F1 ATP synthase subunit beta [Neisseria meningitidis 053442]
gi|385324877|ref|YP_005879316.1| ATP synthase subunit beta [Neisseria meningitidis 8013]
gi|385337343|ref|YP_005891216.1| ATP synthase subunit beta [Neisseria meningitidis WUE 2594]
gi|385340781|ref|YP_005894653.1| ATP synthase F1 subunit beta [Neisseria meningitidis G2136]
gi|385852018|ref|YP_005898533.1| ATP synthase F1 subunit beta [Neisseria meningitidis M04-240196]
gi|385855945|ref|YP_005902458.1| ATP synthase F1 subunit beta [Neisseria meningitidis M01-240355]
gi|416164777|ref|ZP_11607284.1| ATP synthase F1, beta subunit [Neisseria meningitidis N1568]
gi|416179492|ref|ZP_11611009.1| ATP synthase F1, beta subunit [Neisseria meningitidis M6190]
gi|416184942|ref|ZP_11613194.1| ATP synthase F1, beta subunit [Neisseria meningitidis M13399]
gi|416193320|ref|ZP_11617123.1| ATP synthase F1, beta subunit [Neisseria meningitidis ES14902]
gi|416208247|ref|ZP_11621088.1| ATP synthase F1, beta subunit [Neisseria meningitidis 961-5945]
gi|416214763|ref|ZP_11623057.1| ATP synthase F1, beta subunit [Neisseria meningitidis M01-240013]
gi|418289082|ref|ZP_12901472.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM233]
gi|418291343|ref|ZP_12903367.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM220]
gi|421538898|ref|ZP_15985070.1| ATP synthase F1, beta subunit [Neisseria meningitidis 93003]
gi|421540966|ref|ZP_15987101.1| ATP synthase F1, beta subunit [Neisseria meningitidis 93004]
gi|421550943|ref|ZP_15996944.1| ATP synthase F1, beta subunit [Neisseria meningitidis 69166]
gi|421561957|ref|ZP_16007794.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM2657]
gi|433466499|ref|ZP_20423960.1| ATP synthase F1, beta subunit [Neisseria meningitidis 87255]
gi|433470069|ref|ZP_20427475.1| ATP synthase F1, beta subunit [Neisseria meningitidis 98080]
gi|433472120|ref|ZP_20429498.1| ATP synthase F1, beta subunit [Neisseria meningitidis 68094]
gi|433474256|ref|ZP_20431610.1| ATP synthase F1, beta subunit [Neisseria meningitidis 97021]
gi|433476354|ref|ZP_20433687.1| ATP synthase F1, beta subunit [Neisseria meningitidis 88050]
gi|433478483|ref|ZP_20435791.1| ATP synthase F1, beta subunit [Neisseria meningitidis 70012]
gi|433482682|ref|ZP_20439936.1| ATP synthase F1, beta subunit [Neisseria meningitidis 2006087]
gi|433484689|ref|ZP_20441907.1| ATP synthase F1, beta subunit [Neisseria meningitidis 2002038]
gi|433486930|ref|ZP_20444119.1| ATP synthase F1, beta subunit [Neisseria meningitidis 97014]
gi|433493359|ref|ZP_20450443.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM586]
gi|433495413|ref|ZP_20452473.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM762]
gi|433497486|ref|ZP_20454513.1| ATP synthase F1, beta subunit [Neisseria meningitidis M7089]
gi|433499532|ref|ZP_20456536.1| ATP synthase F1, beta subunit [Neisseria meningitidis M7124]
gi|433501598|ref|ZP_20458578.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM174]
gi|433503769|ref|ZP_20460723.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM126]
gi|433516456|ref|ZP_20473217.1| ATP synthase F1, beta subunit [Neisseria meningitidis 2004090]
gi|433518441|ref|ZP_20475180.1| ATP synthase F1, beta subunit [Neisseria meningitidis 96023]
gi|433524823|ref|ZP_20481477.1| ATP synthase F1, beta subunit [Neisseria meningitidis 97020]
gi|433526967|ref|ZP_20483588.1| ATP synthase F1, beta subunit [Neisseria meningitidis 69096]
gi|433529029|ref|ZP_20485635.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM3652]
gi|433531202|ref|ZP_20487781.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM3642]
gi|433532086|ref|ZP_20488653.1| ATP synthase F1, beta subunit [Neisseria meningitidis 2007056]
gi|433535382|ref|ZP_20491912.1| ATP synthase F1, beta subunit [Neisseria meningitidis 2001212]
gi|433539691|ref|ZP_20496157.1| ATP synthase F1, beta subunit [Neisseria meningitidis 70030]
gi|166201721|sp|A1KW11.1|ATPB_NEIMF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|189081336|sp|A9M123.1|ATPB_NEIM0 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|120867296|emb|CAM11067.1| ATP synthase beta chain [Neisseria meningitidis FAM18]
gi|161594832|gb|ABX72492.1| ATP synthase beta chain [Neisseria meningitidis 053442]
gi|254670875|emb|CBA07378.1| ATP synthase beta chain [Neisseria meningitidis alpha153]
gi|254672595|emb|CBA06293.1| ATP synthase beta chain [Neisseria meningitidis alpha275]
gi|261393264|emb|CAX50890.1| ATP synthase beta chain [Neisseria meningitidis 8013]
gi|319409757|emb|CBY90063.1| ATP synthase beta chain [Neisseria meningitidis WUE 2594]
gi|325127449|gb|EGC50379.1| ATP synthase F1, beta subunit [Neisseria meningitidis N1568]
gi|325131657|gb|EGC54363.1| ATP synthase F1, beta subunit [Neisseria meningitidis M6190]
gi|325133395|gb|EGC56059.1| ATP synthase F1, beta subunit [Neisseria meningitidis M13399]
gi|325137520|gb|EGC60103.1| ATP synthase F1, beta subunit [Neisseria meningitidis ES14902]
gi|325141528|gb|EGC63998.1| ATP synthase F1, beta subunit [Neisseria meningitidis 961-5945]
gi|325143645|gb|EGC65964.1| ATP synthase F1, beta subunit [Neisseria meningitidis M01-240013]
gi|325199025|gb|ADY94481.1| ATP synthase F1, beta subunit [Neisseria meningitidis G2136]
gi|325204886|gb|ADZ00340.1| ATP synthase F1, beta subunit [Neisseria meningitidis M01-240355]
gi|325206841|gb|ADZ02294.1| ATP synthase F1, beta subunit [Neisseria meningitidis M04-240196]
gi|372200023|gb|EHP14162.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM220]
gi|372200356|gb|EHP14444.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM233]
gi|389606656|emb|CCA45568.1| F-type H+-transporting ATPase subunit beta [Neisseria meningitidis
alpha522]
gi|402315605|gb|EJU51168.1| ATP synthase F1, beta subunit [Neisseria meningitidis 93003]
gi|402316693|gb|EJU52234.1| ATP synthase F1, beta subunit [Neisseria meningitidis 93004]
gi|402329480|gb|EJU64841.1| ATP synthase F1, beta subunit [Neisseria meningitidis 69166]
gi|402336342|gb|EJU71603.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM2657]
gi|432201036|gb|ELK57122.1| ATP synthase F1, beta subunit [Neisseria meningitidis 98080]
gi|432204609|gb|ELK60648.1| ATP synthase F1, beta subunit [Neisseria meningitidis 87255]
gi|432206746|gb|ELK62747.1| ATP synthase F1, beta subunit [Neisseria meningitidis 68094]
gi|432207574|gb|ELK63563.1| ATP synthase F1, beta subunit [Neisseria meningitidis 97021]
gi|432207952|gb|ELK63936.1| ATP synthase F1, beta subunit [Neisseria meningitidis 88050]
gi|432213141|gb|ELK69067.1| ATP synthase F1, beta subunit [Neisseria meningitidis 70012]
gi|432214551|gb|ELK70450.1| ATP synthase F1, beta subunit [Neisseria meningitidis 2006087]
gi|432219562|gb|ELK75401.1| ATP synthase F1, beta subunit [Neisseria meningitidis 2002038]
gi|432220529|gb|ELK76349.1| ATP synthase F1, beta subunit [Neisseria meningitidis 97014]
gi|432226300|gb|ELK82031.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM586]
gi|432227793|gb|ELK83498.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM762]
gi|432232091|gb|ELK87745.1| ATP synthase F1, beta subunit [Neisseria meningitidis M7089]
gi|432232602|gb|ELK88239.1| ATP synthase F1, beta subunit [Neisseria meningitidis M7124]
gi|432233097|gb|ELK88730.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM174]
gi|432238396|gb|ELK93963.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM126]
gi|432251012|gb|ELL06385.1| ATP synthase F1, beta subunit [Neisseria meningitidis 2004090]
gi|432251751|gb|ELL07114.1| ATP synthase F1, beta subunit [Neisseria meningitidis 96023]
gi|432257681|gb|ELL12976.1| ATP synthase F1, beta subunit [Neisseria meningitidis 97020]
gi|432258518|gb|ELL13801.1| ATP synthase F1, beta subunit [Neisseria meningitidis 69096]
gi|432263653|gb|ELL18866.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM3652]
gi|432264194|gb|ELL19399.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM3642]
gi|432268731|gb|ELL23898.1| ATP synthase F1, beta subunit [Neisseria meningitidis 2007056]
gi|432269852|gb|ELL25003.1| ATP synthase F1, beta subunit [Neisseria meningitidis 2001212]
gi|432271137|gb|ELL26264.1| ATP synthase F1, beta subunit [Neisseria meningitidis 70030]
Length = 465
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/365 (64%), Positives = 287/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + + L N +VQQ +G+ +VRTIA G+++G+KR V +TG
Sbjct: 13 VVDVEFPRDMIPRVYDALKLDENGLTLEVQQLLGDGVVRTIAMGSSDGLKRGMTVSNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG P+D G I++ K IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQAAPKFDELSSTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 151/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRIV+ G +D + + AP +
Sbjct: 60 GLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQAAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 STTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|261364179|ref|ZP_05977062.1| ATP synthase F1, beta subunit [Neisseria mucosa ATCC 25996]
gi|288567786|gb|EFC89346.1| ATP synthase F1, beta subunit [Neisseria mucosa ATCC 25996]
Length = 465
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/365 (64%), Positives = 286/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + L N +VQQ +G+ +VRTIA G+++G+KR V +TG
Sbjct: 13 VVDVEFPRDAIPHVYDALKLDANGLTLEVQQLLGDGVVRTIAMGSSDGLKRGMTVSNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG P+D G I++ K IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKGTLGRIVDVLGTPVDEAGSIDTDKHRAIHQTAPKFDELSATTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 151/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRIV+ G +D + + AP +
Sbjct: 60 GLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGSIDTDKHRAIHQTAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 ATTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|319785938|ref|YP_004145413.1| ATP synthase F1 subunit beta [Pseudoxanthomonas suwonensis 11-1]
gi|317464450|gb|ADV26182.1| ATP synthase F1, beta subunit [Pseudoxanthomonas suwonensis 11-1]
Length = 465
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/365 (64%), Positives = 286/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + K + + + +VQQQ+G+ IVRTIA G+T+G+KRN + +TG+
Sbjct: 13 VVDVEFPRAEVPKVYDALKVDGTAITLEVQQQLGDGIVRTIALGSTDGLKRNLVATNTGR 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
I PVG TLGRI++VLG+ ID G + + IH P + +Q +LETGIKVI
Sbjct: 73 AISVPVGAGTLGRIMDVLGNAIDEAGPVQASDHWEIHRAAPSYEDQSSATELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLF+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGKGKDVLLFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G EHY A V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRNIAALGIYPAVDPLDSTSRQLDPNVIGHEHYDTARRVQATLQKY 372
Query: 908 KELKD 912
KELKD
Sbjct: 373 KELKD 377
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 141/324 (43%), Gaps = 29/324 (8%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T + +PVG LGRI++ G ID + + + AP D+ S E L TGI
Sbjct: 70 TGRAISVPVGAGTLGRIMDVLGNAIDEAGPVQASDHWEIHRAAPSYEDQSSATELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 130 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDL 358
+++K N +D +V + + TG T+ EYFRD G+D L+ D++
Sbjct: 190 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGKGKDVLLFVDNI 249
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P V Y L E + +++I + +G++T
Sbjct: 250 YRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKSGSIT 296
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L N+ PA++ S SR V G
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGIYPAVDPLDSTSRQLDPNVIGH 356
Query: 474 AQYKIVKKLSGDIRIMLAQYRELE 497
Y ++ ++ L +Y+EL+
Sbjct: 357 EHYDTARR----VQATLQKYKELK 376
>gi|399115638|emb|CCG18441.1| ATP synthase subunit beta [Taylorella equigenitalis 14/56]
Length = 467
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G+ R V T PI PVG+ TLGRI++VLG PID G
Sbjct: 49 EVQQQLGDGVVRTIALGSSDGLSRGMPVERTNAPISVPVGNGTLGRIMDVLGRPIDEAGP 108
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++K IH PKF + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 109 IEHEEKRSIHQPAPKFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 168
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEM+ESNVLDKV++++GQMNEP GNRLRVA
Sbjct: 169 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVA 228
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+D+LLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 229 LTGLTMAEKFRDEGRDILLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 288
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 289 RITSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIASLGIYPAVDPLDSS 348
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP++VGEEHY VA V+ LQ+YK+L+D
Sbjct: 349 SRQLDPHVVGEEHYSVARAVQQTLQRYKDLRD 380
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 151/362 (41%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G T +PVG LGRI++ G ID + + ++ + AP +
Sbjct: 69 GLSRGMPVERTNAPISVPVGNGTLGRIMDVLGRPIDEAGPIEHEEKRSIHQPAPKFDELS 128
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 129 PSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 188
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 189 ERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILLF 248
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 249 IDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 295
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 296 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIASLGIYPAVDPLDSSSRQLDPH 355
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y + + ++ L +Y++L +L K + KI + Q
Sbjct: 356 VVGEEHYSVARA----VQQTLQRYKDLRDIIAILGMDELSPEDKQTVARARKIQRFLSQP 411
Query: 528 PH 529
H
Sbjct: 412 FH 413
>gi|167838424|ref|ZP_02465283.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis MSMB43]
gi|424901544|ref|ZP_18325060.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis MSMB43]
gi|390931919|gb|EIP89319.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis MSMB43]
Length = 459
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 277/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R +V +TG PI PVG TLGRI++VLG PID G
Sbjct: 40 EVQQQLGDGVVRTICLGASDGLRRGVVVKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S+ K IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IVSEHKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 220 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 340 SRQIDPNVIGEEHYSITRRVQQTLQRYKELRD 371
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 145/346 (41%), Gaps = 25/346 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + +++ ++ + AP + E L TGIK ID +
Sbjct: 76 VPVGKPTLGRIMDVLGRPIDEAGPIVSEHKRSIHQKAPAFDELSPSTELLETGIKVIDLI 135
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K ++ +G++ + +++K
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 195
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
N +D +V + + TG T+ E+FRD G D L D++ + A ++S
Sbjct: 196 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSA 255
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P V Y L E K+ +++I + G++T+ + D+
Sbjct: 256 LLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKKGSITSVQAVYVPADDL 302
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P D + L ++ + PA++ S SR V G Y I ++
Sbjct: 303 TDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRR---- 358
Query: 486 IRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
++ L +Y+EL +L K + KI + Q H
Sbjct: 359 VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQPFH 404
>gi|254520882|ref|ZP_05132937.1| ATP synthase F1, beta subunit [Stenotrophomonas sp. SKA14]
gi|219718473|gb|EED36998.1| ATP synthase F1, beta subunit [Stenotrophomonas sp. SKA14]
Length = 468
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/362 (65%), Positives = 285/362 (78%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + + N +VQQQ+G+ +VRTIA G+T+G+KRN I +T + I
Sbjct: 16 VEFPRESVPKVYDALKVDNTEITLEVQQQLGDGVVRTIALGSTDGLKRNLIATNTNRGIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G + + IH P + +Q +LETGIKVIDL+
Sbjct: 76 VPVGAGTLGRIMDVLGRPIDEAGPVAASDSWEIHRAAPSYEDQSPATELLETGIKVIDLM 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
NVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLF+DNIYR+TLA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLA 255
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STKNG+ITS+QA+YVPADDLTDPSP+T
Sbjct: 256 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKNGSITSIQAVYVPADDLTDPSPAT 315
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLDST+ LSR IA LGIYPA+DPL+S S+Q+DP ++G EHY A V+ LQKYKEL
Sbjct: 316 TFAHLDSTVTLSRSIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375
Query: 911 KD 912
KD
Sbjct: 376 KD 377
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 29/324 (8%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T + +PVG LGRI++ G ID + + + AP D+ E L TGI
Sbjct: 70 TNRGISVPVGAGTLGRIMDVLGRPIDEAGPVAASDSWEIHRAAPSYEDQSPATELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 130 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDL 358
+++K N +D +V + + TG T+ EYFRD G+D L+ D++
Sbjct: 190 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNI 249
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P V Y L E + +++I + NG++T
Sbjct: 250 YRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKNGSIT 296
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L ++ + PA++ S SR V G
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDSTVTLSRSIASLGIYPAVDPLDSTSRQMDPLVIGH 356
Query: 474 AQYKIVKKLSGDIRIMLAQYRELE 497
Y ++ ++ L +Y+EL+
Sbjct: 357 EHYDTAQR----VQQTLQKYKELK 376
>gi|325921269|ref|ZP_08183129.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas gardneri ATCC
19865]
gi|325548236|gb|EGD19230.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas gardneri ATCC
19865]
Length = 468
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/362 (64%), Positives = 286/362 (79%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + + ++ +VQQQ+G+ +VRTIA G+T+G+KRN + +T + I
Sbjct: 16 VEFQRHEVPKVYHALKVEGTEITLEVQQQLGDGVVRTIALGSTDGLKRNLLATNTERAIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G++ + IH P + +Q + +LETGIKVIDL+
Sbjct: 76 VPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRAAPSYEDQSSSTELLETGIKVIDLM 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
NVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLF+DNIYR+TLA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLA 255
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+T
Sbjct: 256 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPAT 315
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLDST+ LSR IA LGIYPA+DPL+S S+Q+DP ++G EHY A V+ LQKYKEL
Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375
Query: 911 KD 912
KD
Sbjct: 376 KD 377
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 140/324 (43%), Gaps = 29/324 (8%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
TE+ +PVG LGRI++ G ID + + + AP D+ S E L TGI
Sbjct: 70 TERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRAAPSYEDQSSSTELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 130 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDL 358
+++K N +D +V + + TG T+ EYFRD G+D L+ D++
Sbjct: 190 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNI 249
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P + + L ER I + +G++T
Sbjct: 250 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQER-------------ITSTKSGSIT 296
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L N+ + PA++ S SR V G
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGH 356
Query: 474 AQYKIVKKLSGDIRIMLAQYRELE 497
Y ++ ++ L +Y+EL+
Sbjct: 357 EHYDTAQR----VQQTLQKYKELK 376
>gi|304388486|ref|ZP_07370589.1| ATP synthase F1 sector beta subunit [Neisseria meningitidis ATCC
13091]
gi|421559891|ref|ZP_16005758.1| ATP synthase F1, beta subunit [Neisseria meningitidis 92045]
gi|304337483|gb|EFM03649.1| ATP synthase F1 sector beta subunit [Neisseria meningitidis ATCC
13091]
gi|402334457|gb|EJU69745.1| ATP synthase F1, beta subunit [Neisseria meningitidis 92045]
Length = 465
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/365 (64%), Positives = 287/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + + L N +VQQ +G+ +VRTIA G+++G+KR V +TG
Sbjct: 13 VVDVEFPRDMIPRVYDALKLDENGLTLEVQQLLGDGVVRTIAMGSSDGLKRGMTVSNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG P+D G I++ K IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQAAPKFDELSSTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 151/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRIV+ G +D + + AP +
Sbjct: 60 GLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQAAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 STTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|59802447|ref|YP_209159.1| ATP synthase F0F1 subunit beta [Neisseria gonorrhoeae FA 1090]
gi|194100111|ref|YP_002003251.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae NCCP11945]
gi|240013280|ref|ZP_04720193.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae DGI18]
gi|240015728|ref|ZP_04722268.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae FA6140]
gi|240120352|ref|ZP_04733314.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae PID24-1]
gi|268593951|ref|ZP_06128118.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae 35/02]
gi|268596007|ref|ZP_06130174.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae FA19]
gi|268600473|ref|ZP_06134640.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID18]
gi|268681255|ref|ZP_06148117.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID332]
gi|268683425|ref|ZP_06150287.1| ATP synthase subunit beta [Neisseria gonorrhoeae SK-92-679]
gi|291044726|ref|ZP_06570435.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae DGI2]
gi|293397825|ref|ZP_06642031.1| ATP synthase F1, beta subunit [Neisseria gonorrhoeae F62]
gi|385337000|ref|YP_005890947.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae TCDC-NG08107]
gi|75432313|sp|Q5F4Z0.1|ATPB_NEIG1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740654|sp|B4RJG0.1|ATPB_NEIG2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|59719342|gb|AAW90747.1| putative ATP synthase beta chain [Neisseria gonorrhoeae FA 1090]
gi|193935401|gb|ACF31225.1| ATP synthase subunit B [Neisseria gonorrhoeae NCCP11945]
gi|268547340|gb|EEZ42758.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae 35/02]
gi|268549795|gb|EEZ44814.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae FA19]
gi|268584604|gb|EEZ49280.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID18]
gi|268621539|gb|EEZ53939.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID332]
gi|268623709|gb|EEZ56109.1| ATP synthase subunit beta [Neisseria gonorrhoeae SK-92-679]
gi|291011620|gb|EFE03616.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae DGI2]
gi|291611771|gb|EFF40840.1| ATP synthase F1, beta subunit [Neisseria gonorrhoeae F62]
gi|317165543|gb|ADV09084.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae TCDC-NG08107]
Length = 465
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/365 (64%), Positives = 287/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + + L N +VQQ +G+ +VRTIA G+++G+KR V +TG
Sbjct: 13 VVDVEFPRDMIPRVYDALKLDENGLTLEVQQLLGDGVVRTIAMGSSDGLKRGMTVSNTGS 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG P+D G I++ K IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQAAPKFDELSSTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFSGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 151/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRIV+ G +D + + AP +
Sbjct: 60 GLKRGMTVSNTGSPITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQAAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 STTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFSGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLAVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|408821973|ref|ZP_11206863.1| F0F1 ATP synthase subunit beta [Pseudomonas geniculata N1]
Length = 468
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/362 (65%), Positives = 285/362 (78%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + + N +VQQQ+G+ +VRTIA G+T+G+KRN + +T + I
Sbjct: 16 VEFPRESVPKVYDALKVDNTEITLEVQQQLGDGVVRTIALGSTDGLKRNLVATNTNRGIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G + + IH P + +Q +LETGIKVIDL+
Sbjct: 76 VPVGAGTLGRIMDVLGRPIDEAGPVAASDSWEIHRAAPSYEDQSPATELLETGIKVIDLM 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
NVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLF+DNIYR+TLA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLA 255
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STKNG+ITS+QA+YVPADDLTDPSP+T
Sbjct: 256 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKNGSITSIQAVYVPADDLTDPSPAT 315
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLDST+ LSR IA LGIYPA+DPL+S S+Q+DP ++G EHY A V+ LQKYKEL
Sbjct: 316 TFAHLDSTVTLSRSIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375
Query: 911 KD 912
KD
Sbjct: 376 KD 377
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 29/324 (8%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T + +PVG LGRI++ G ID + + + AP D+ E L TGI
Sbjct: 70 TNRGISVPVGAGTLGRIMDVLGRPIDEAGPVAASDSWEIHRAAPSYEDQSPATELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 130 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDL 358
+++K N +D +V + + TG T+ EYFRD G+D L+ D++
Sbjct: 190 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNI 249
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P V Y L E + +++I + NG++T
Sbjct: 250 YRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKNGSIT 296
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L ++ + PA++ S SR V G
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDSTVTLSRSIASLGIYPAVDPLDSTSRQMDPLVIGH 356
Query: 474 AQYKIVKKLSGDIRIMLAQYRELE 497
Y ++ ++ L +Y+EL+
Sbjct: 357 EHYDTAQR----VQQTLQKYKELK 376
>gi|400287358|ref|ZP_10789390.1| F0F1 ATP synthase subunit alpha [Psychrobacter sp. PAMC 21119]
Length = 514
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/405 (57%), Positives = 313/405 (77%), Gaps = 4/405 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D L +GQK +CT +I E+PVG ELLGR+V++ G ID K K + VEKI
Sbjct: 74 AVVLGDFLKLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDGKGPIDAKMTDKVEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR+SV++P++TG K++D+MIPIG+GQRELIIGDRQTGKT +AID II QK+ +
Sbjct: 134 APGVIDRQSVDQPVMTGYKAVDTMIPIGRGQRELIIGDRQTGKTAMAIDAIIAQKSSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ ++YT VV A+A++ AA QYI+PY+GCT+GEYFRD
Sbjct: 194 CVYVAIGQKRSTIANVVRKLEQTGALEYTTVVVASASEPAALQYIAPYSGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI++DDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++EK
Sbjct: 254 GEDALIVFDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNAAYVEKF 313
Query: 407 --KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVG 464
++ K G+LTA PIIET GDV++F+PTNVISITDGQIFL+++LFNS RPA+N G
Sbjct: 314 TNGEVVGK-TGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESSLFNSGIRPAVNAG 372
Query: 465 LSVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLM 524
+SVSRVGGAAQ KI+KKLSG IR LAQYREL +F++F+SDLD T+ QL +GE+++ LM
Sbjct: 373 ISVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFAQFASDLDDATREQLDHGERVTELM 432
Query: 525 KQKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
KQK ++ SI E ++ F +P+++I FE + ++Y
Sbjct: 433 KQKQYQPMSISEQAAVIYASNEGFLSDVPVEKIGAFEESYLRYMH 477
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 151/320 (47%), Gaps = 27/320 (8%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + PVG LGR+++ LG+PID KG I++K + + P ++ + + TG
Sbjct: 92 TGRILEVPVGPELLGRVVDALGNPIDGKGPIDAKMTDKVEKIAPGVIDRQSVDQPVMTGY 151
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCS-VFIGVGERSREGNDF 729
K +D + P +G + + G GKT ++ I IA + G V++ +G++ +
Sbjct: 152 KAVDTMIPIGRGQRELIIGDRQTGKTAMAIDAI--IAQKSSGIKCVYVAIGQKRSTIANV 209
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
+++++ L+ +++ +EP+ + +G ++ E FR+ G+D L+ D++ + +
Sbjct: 210 VRKLEQTGALEYTTVVVASASEPAALQYIAPYSGCTMGEYFRDRGEDALIVFDDLSKQAV 269
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST---------------KNGTITSVQ 834
A ++S +L R P Y + +L ER S K G++T++
Sbjct: 270 AYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNAAYVEKFTNGEVVGKTGSLTALP 329
Query: 835 AIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHY 894
I A D++ P+ + D I L + GI PA++ S S+ + G
Sbjct: 330 IIETQAGDVSAFVPTNVISITDGQIFLESSLFNSGIRPAVNAGISVSR-----VGGAAQT 384
Query: 895 KV----ANEVKFYLQKYKEL 910
K+ + ++ L +Y+EL
Sbjct: 385 KIIKKLSGGIRTALAQYREL 404
>gi|421564023|ref|ZP_16009834.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM2795]
gi|421907974|ref|ZP_16337836.1| ATP synthase F1, beta subunit [Neisseria meningitidis alpha704]
gi|393290939|emb|CCI73848.1| ATP synthase F1, beta subunit [Neisseria meningitidis alpha704]
gi|402339242|gb|EJU74459.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM2795]
Length = 465
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/365 (64%), Positives = 287/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + + L N +VQQ +G+ +VRTIA G+++G+KR V +TG
Sbjct: 13 VVDVEFPRDMIPRVYDALKLDENGLTLEVQQLLGDGVVRTIAMGSSDGLKRGMTVSNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG P+D G I++ K IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQAAPKFDELSSTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 151/363 (41%), Gaps = 35/363 (9%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G T +PVG LGRIV+ G +D + + AP + S
Sbjct: 61 LKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQAAPKFDELSS 120
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G+
Sbjct: 121 TTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGE 180
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQ 349
+ + +++K N +D +V + + TG T+ EYFRD G+
Sbjct: 181 RTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGR 240
Query: 350 DCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKI 409
D L D++ ++ A ++S LL R P + + RL ER I
Sbjct: 241 DVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------I 287
Query: 410 FNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 288 TSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSR 347
Query: 470 -----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLM 524
V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 348 QLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVMR 397
Query: 525 KQK 527
+K
Sbjct: 398 ARK 400
>gi|445494000|ref|ZP_21461044.1| ATP synthase subunit beta [Janthinobacterium sp. HH01]
gi|444790161|gb|ELX11708.1| ATP synthase subunit beta [Janthinobacterium sp. HH01]
Length = 466
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 232/354 (65%), Positives = 287/354 (81%), Gaps = 7/354 (1%)
Query: 566 KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLG 625
K F + ++ + +VQQQ+G+ +VRTIA G+++G++R ++ +TGKPI+ PVG TLG
Sbjct: 25 KVFDALKMEGSELTLEVQQQLGDGVVRTIALGSSDGLRRGMMIQNTGKPIMVPVGKATLG 84
Query: 626 RILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKI 685
RI++VLG+PID G + + + IH PP + + ++LETGIKVIDL+CPF KGGK+
Sbjct: 85 RIMDVLGNPIDECGPVAHDQLASIHRTPPAYDELSPSQDLLETGIKVIDLVCPFAKGGKV 144
Query: 686 GLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD----- 740
GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM ++ V+D
Sbjct: 145 GLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADAKVVDLENPA 204
Query: 741 --KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAML 798
KV+++YGQMNEP GNRLRVALTGL+IAE FR+ GKDVL F+DNIYRFTLAGTEVSA+L
Sbjct: 205 NSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGKDVLFFVDNIYRFTLAGTEVSALL 264
Query: 799 GRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDST 858
GR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST
Sbjct: 265 GRMPSAVGYQPTLAEEMGRLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFGHLDST 324
Query: 859 IVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY A V+ LQ+YKEL+D
Sbjct: 325 VVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARAVQGTLQRYKELRD 378
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 153/391 (39%), Gaps = 48/391 (12%)
Query: 132 RCLNQTLNIKFANNTVL----SGQING---TTGYEEAAAQGFV-AVLIDDLKNLTQGQKC 183
+C+ ++++F N + + ++ G T ++ G V + + L +G
Sbjct: 8 QCIGAVVDVEFPRNAMPKVFDALKMEGSELTLEVQQQLGDGVVRTIALGSSDGLRRGMMI 67
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T K +PVG LGRI++ G ID ++ + P + + L T
Sbjct: 68 QNTGKPIMVPVGKATLGRIMDVLGNPIDECGPVAHDQLASIHRTPPAYDELSPSQDLLET 127
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 128 GIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 187
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGEYFRDLGQD 350
Y+ D VV A+S Q P TG TI E FRD G+D
Sbjct: 188 F-----YHEMADAKVVDLENPANSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGKD 242
Query: 351 CLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIF 410
L D++ + A ++S LL R P + + RL ER I
Sbjct: 243 VLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------IT 289
Query: 411 NKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR- 469
+ G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 290 STKTGSITSIQAVYVPADDLTDPSPATTFGHLDSTVVLSRDIASLGIYPAVDPLDSTSRQ 349
Query: 470 ----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + + G L +Y+EL
Sbjct: 350 LDPLVVGQEHYDTARAVQG----TLQRYKEL 376
>gi|383315539|ref|YP_005376381.1| ATP synthase F1 subunit beta [Frateuria aurantia DSM 6220]
gi|379042643|gb|AFC84699.1| ATP synthase, F1 beta subunit [Frateuria aurantia DSM 6220]
Length = 470
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/338 (68%), Positives = 279/338 (82%), Gaps = 6/338 (1%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQ+IG+ +VRTIA G+T+G+KR V +TG PI PVGD TLGRI++VLG PID G
Sbjct: 40 EVQQEIGDGVVRTIALGSTDGLKRGLAVTNTGAPISVPVGDKTLGRIMDVLGTPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ + K IH P + Q ++ +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 VETDAKWAIHREAPAYDEQALSSELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H+G SVF GVGER+REGNDFYHEMK+SNVLDKV+++YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKAHEGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
LTGL++AE FR+ GKDVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQP LA E
Sbjct: 220 LTGLTMAEYFRDQKDEKGKGKDVLFFVDNIYRYTLAGTEVSALLGRLPSAVGYQPMLASE 279
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MGKLQERI+STK+G+ITSVQA+YVPADD TDP+P+TTF HLD+T+ LSR IA LGIYPA+
Sbjct: 280 MGKLQERITSTKSGSITSVQAVYVPADDFTDPAPATTFAHLDATVNLSRDIAALGIYPAV 339
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL S S+QLDP +VG++HY VA +V+ LQ+YKELKD
Sbjct: 340 DPLASTSRQLDPLVVGQDHYDVARQVQGTLQRYKELKD 377
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 142/334 (42%), Gaps = 29/334 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG + LGRI++ G ID + + + AP ++
Sbjct: 60 GLKRGLAVTNTGAPISVPVGDKTLGRIMDVLGTPIDEAGPVETDAKWAIHREAPAYDEQA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+E L TGIK ID + P KG + + G GKT ++ I N K + ++ +G
Sbjct: 120 LSSELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHEGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL------G 348
++ + +++K N +D +V + + TG T+ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDEKGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P V Y L K+ +++
Sbjct: 240 KDVLFFVDNIYRYTLAGTEVSALLGR------LPSAVGY-QPMLASEMGKL------QER 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + +G++T+ + D T P + D + L ++ PA++ S S
Sbjct: 287 ITSTKSGSITSVQAVYVPADDFTDPAPATTFAHLDATVNLSRDIAALGIYPAVDPLASTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
R V G Y + +++ G L +Y+EL+
Sbjct: 347 RQLDPLVVGQDHYDVARQVQG----TLQRYKELK 376
>gi|451811928|ref|YP_007448382.1| F-type H+-transporting ATPase subunit alpha [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451777830|gb|AGF48778.1| F-type H+-transporting ATPase subunit alpha [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 513
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/397 (59%), Positives = 312/397 (78%), Gaps = 4/397 (1%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++G T +I E+PVG+ L GR+VN+ GE ID + ++ + +EK+
Sbjct: 73 AVILGDYTGVSEGDIVRTTGRILEVPVGYGLRGRVVNALGEPIDGRGSIKYESTDIIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR +V++PL TGIKSIDSM+PIG+GQRELIIGDRQTGKT++AIDTIINQKN V
Sbjct: 133 APGVIDRYTVSQPLQTGIKSIDSMVPIGRGQRELIIGDRQTGKTSVAIDTIINQKNSGVT 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK +S+ NV+ KL+ + ++YT++VAATA+DSAA QYI+PY+GCT+GEYFRD
Sbjct: 193 CIYVAIGQKAASINNVVRKLEEHGALEYTIIVAATASDSAAMQYIAPYSGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLE-- 405
G+D LI+YDDLTK AWAYRQISLLL+RPPGREA+PGDVFYLHSRLLER++++++ ++E
Sbjct: 253 GEDALIVYDDLTKQAWAYRQISLLLKRPPGREAYPGDVFYLHSRLLERAARVSENYVEKF 312
Query: 406 -KKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVG 464
K K+ NK G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G
Sbjct: 313 TKGKVKNK-TGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGVRPAINAG 371
Query: 465 LSVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLM 524
+SVSRVGGAAQ KI+KKLSG IR LAQYREL +FS+FSSDLD T+ QL G+++ L+
Sbjct: 372 ISVSRVGGAAQTKIIKKLSGGIRTDLAQYRELAAFSQFSSDLDEATRRQLDRGKRVVELL 431
Query: 525 KQKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFE 561
KQ + + E ++L + F + ++ I LFE
Sbjct: 432 KQPQYHPLKVWEQAVLLFSLNRGFMDDVNVQDINLFE 468
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 154/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ G+ IV TG+ + PVG GR++N LG+PID +G I + I
Sbjct: 71 VGAVILGDYTGVSEGDIVRTTGRILEVPVGYGLRGRVVNALGEPIDGRGSIKYESTDIIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P ++ + L+TGIK ID + P +G + + G GKT ++ I N
Sbjct: 131 KVAPGVIDRYTVSQPLQTGIKSIDSMVPIGRGQRELIIGDRQTGKTSVAIDTIINQKNSG 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ N+ +++E L+ ++ ++ + + +G ++ E F
Sbjct: 191 VTC-IYVAIGQKAASINNVVRKLEEHGALEYTIIVAATASDSAAMQYIAPYSGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 250 RDRGEDALIVYDDLTKQAWAYRQISLLLKRPPGREAYPGDVFYLHSRLLERAARVSENYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + G+ PAI+
Sbjct: 310 EKFTKGKVKNKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGVRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
S S+ + G K+ + ++ L +Y+EL
Sbjct: 370 AGISVSR-----VGGAAQTKIIKKLSGGIRTDLAQYREL 403
>gi|257454336|ref|ZP_05619599.1| ATP synthase F1, alpha subunit [Enhydrobacter aerosaccus SK60]
gi|257448239|gb|EEV23219.1| ATP synthase F1, alpha subunit [Enhydrobacter aerosaccus SK60]
Length = 514
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 232/404 (57%), Positives = 308/404 (76%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + NL +GQK +CT +I E+PVG ELLGR+V++ G ID K K + VEKI
Sbjct: 74 AVVLGEYLNLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDGKGPINAKLTDKVEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR+SV+EP++TG K++D+MIPIG+GQRELIIGDRQTGKT +AID II QK+ +
Sbjct: 134 APGVIDRQSVDEPVMTGYKAVDTMIPIGRGQRELIIGDRQTGKTAMAIDAIIAQKHSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV +GQK S++ NV+ KL+ + YT VV A+A++ AA QYI+PY+GCT+GEYFRD
Sbjct: 194 CVYVAVGQKRSTIANVVRKLEETGALAYTTVVVASASEPAALQYIAPYSGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++EK
Sbjct: 254 GEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNAEYVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+++LFNS RPA+N G+
Sbjct: 314 TNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESSLFNSGIRPAVNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKLSG IR LAQYREL +F++F+SDLD T+ QL +G++++ LMK
Sbjct: 374 SVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFAQFASDLDDATRKQLDHGQRVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q + SI E ++ + +P+ ++ FE +++Y R
Sbjct: 434 QNQYAPMSIAEQAAVIYASNEGYLADVPVNKVGAFEAGLLRYLR 477
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 152/320 (47%), Gaps = 27/320 (8%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + PVG LGR+++ LG+PID KG IN+K + + P ++ + + TG
Sbjct: 92 TGRILEVPVGPELLGRVVDALGNPIDGKGPINAKLTDKVEKIAPGVIDRQSVDEPVMTGY 151
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCS-VFIGVGERSREGNDF 729
K +D + P +G + + G GKT ++ I IA +H G V++ VG++ +
Sbjct: 152 KAVDTMIPIGRGQRELIIGDRQTGKTAMAIDAI--IAQKHSGIKCVYVAVGQKRSTIANV 209
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
+++E+ L +++ +EP+ + +G ++ E FR+ G+D L+ D++ + +
Sbjct: 210 VRKLEETGALAYTTVVVASASEPAALQYIAPYSGCTMGEYFRDRGEDALIIYDDLSKQAV 269
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERIS---------------STKNGTITSVQ 834
A ++S +L R P Y + +L ER S + K G++T++
Sbjct: 270 AYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNAEYVEKFTNGAVTGKTGSLTALP 329
Query: 835 AIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHY 894
I A D++ P+ + D I L + GI PA++ S S+ + G
Sbjct: 330 IIETQAGDVSAFVPTNVISITDGQIFLESSLFNSGIRPAVNAGISVSR-----VGGAAQT 384
Query: 895 KV----ANEVKFYLQKYKEL 910
K+ + ++ L +Y+EL
Sbjct: 385 KIIKKLSGGIRTALAQYREL 404
>gi|148652009|ref|YP_001279102.1| F0F1 ATP synthase subunit beta [Psychrobacter sp. PRwf-1]
gi|172048450|sp|A5WBW1.1|ATPB_PSYWF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|148571093|gb|ABQ93152.1| ATP synthase F1 subcomplex beta subunit [Psychrobacter sp. PRwf-1]
Length = 475
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/369 (64%), Positives = 292/369 (79%), Gaps = 13/369 (3%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ + + + + + +VQQQ+G+ +VRTIA G+T G+KR V +TG PI
Sbjct: 16 VEFNRTDVPQVYDALVVDGTDTTLEVQQQLGDGVVRTIAMGSTEGLKRGLPVTNTGAPIT 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG+ TLGRI++VLG PID +G +NS+ K IH P + Q + ++LETGIKVIDLL
Sbjct: 76 VPVGEATLGRIMDVLGRPIDEQGPVNSEDKWSIHRQAPSYDEQANSTDLLETGIKVIDLL 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA++H G SVF GVGER+REGNDFYHEM+E+
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYHEMQEA 195
Query: 737 NVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDN 783
V+D KV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLF+DN
Sbjct: 196 GVVDVENFTNSKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGKDVLLFVDN 255
Query: 784 IYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDL 843
IYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+ST+ G+ITS+QA+YVPADDL
Sbjct: 256 IYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTQTGSITSIQAVYVPADDL 315
Query: 844 TDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFY 903
TDPSP+TTF HLD+T+VLSR IA GIYPAIDPL+S S+QLDP ++GEEHY VA V+
Sbjct: 316 TDPSPATTFAHLDATVVLSRDIASQGIYPAIDPLDSTSRQLDPLVIGEEHYNVARGVQEV 375
Query: 904 LQKYKELKD 912
LQ+YKELKD
Sbjct: 376 LQRYKELKD 384
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 159/380 (41%), Gaps = 46/380 (12%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G ID + +++ ++ + AP ++
Sbjct: 59 EGLKRGLPVTNTGAPITVPVGEATLGRIMDVLGRPIDEQGPVNSEDKWSIHRQAPSYDEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ + L TGIK ID + P KG + + G GKT ++ I N K+ + ++ +
Sbjct: 119 ANSTDLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
G++ + ++++ +D +V + + TG T+ EYFRD
Sbjct: 179 GERTREGNDFYHEMQEAGVVDVENFTNSKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRD 238
Query: 347 L------GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKIN 400
G+D L+ D++ ++ A ++S LL R P + L E +
Sbjct: 239 QKDENGKGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL- 290
Query: 401 KYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPA 460
+++I + G++T+ + D+T P + D + L ++ + PA
Sbjct: 291 -----QERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPA 345
Query: 461 INVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELES------FSKFSSDLDIV 509
I+ S SR V G Y + + ++ +L +Y+EL+ + S D +V
Sbjct: 346 IDPLDSTSRQLDPLVIGEEHYNVARG----VQEVLQRYKELKDIIAILGMDELSEDDKMV 401
Query: 510 TKTQLYNGEKISLLMKQKPH 529
+Y KI + Q H
Sbjct: 402 ----VYRARKIQRFLSQPFH 417
>gi|296313936|ref|ZP_06863877.1| ATP synthase F1, beta subunit [Neisseria polysaccharea ATCC 43768]
gi|296839474|gb|EFH23412.1| ATP synthase F1, beta subunit [Neisseria polysaccharea ATCC 43768]
Length = 465
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/365 (64%), Positives = 286/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + L N +VQQ +G+ +VRTIA G+++G+KR V +TG
Sbjct: 13 VVDVEFPRDAIPHVYDALKLDENGLTLEVQQLLGDGVVRTIAMGSSDGLKRGMSVSNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG P+D G I++ K IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQTAPKFDELSATTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 151/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRIV+ G +D + + AP +
Sbjct: 60 GLKRGMSVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQTAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 ATTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|254515885|ref|ZP_05127945.1| ATP synthase F1, alpha subunit [gamma proteobacterium NOR5-3]
gi|219675607|gb|EED31973.1| ATP synthase F1, alpha subunit [gamma proteobacterium NOR5-3]
Length = 514
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 229/402 (56%), Positives = 305/402 (75%), Gaps = 2/402 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D K L +GQ C CT +I E+PVG EL GR+V++ G ID K + +EK+
Sbjct: 74 AVVLGDYKKLAEGQSCRCTGRILEVPVGPELQGRVVDALGTPIDGKGPVNAAMTDALEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG+++R+SV++P+ G+K+ID+M+PIG+GQRELIIGDRQ GKT IAID IINQK +
Sbjct: 134 APGVIERQSVDQPVQIGLKAIDAMVPIGRGQRELIIGDRQIGKTAIAIDAIINQKGTGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV +GQK SS+ +V+ KL+ + MD+T+VVAA A+D AA QY++P+ GCT+GEY+RD
Sbjct: 194 CVYVAVGQKASSVASVVRKLEEHGAMDHTIVVAANASDPAAMQYLAPFAGCTMGEYYRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 254 GEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA P+IET GDV++F+PTNVISITDGQIFL+T++FNS RPA+N G+
Sbjct: 314 TDGAVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLETDMFNSGVRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKLSG IR LAQYREL +FS+F+SDLD TK QL +GE+++ LMK
Sbjct: 374 SVSRVGGAAQTKVIKKLSGGIRTALAQYRELAAFSQFASDLDDATKAQLDHGERVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKY 567
QK + SI E+ ++L + + +I FE ++ +
Sbjct: 434 QKQYSPQSIAEMGLMLYAANEGHLQDVEVAKIGDFEAALLSF 475
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 144/322 (44%), Gaps = 31/322 (9%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + PVG GR+++ LG PID KG +N+ + + P + + ++ G+
Sbjct: 92 TGRILEVPVGPELQGRVVDALGTPIDGKGPVNAAMTDALEKVAPGVIERQSVDQPVQIGL 151
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCS---VFIGVGERSREGN 727
K ID + P +G + + G +GKT ++ I I KG V++ VG+++
Sbjct: 152 KAIDAMVPIGRGQRELIIGDRQIGKTAIAIDAI----INQKGTGIKCVYVAVGQKASSVA 207
Query: 728 DFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRF 787
+++E +D ++ ++P+ + G ++ E +R+ G+D L+ D++ +
Sbjct: 208 SVVRKLEEHGAMDHTIVVAANASDPAAMQYLAPFAGCTMGEYYRDRGEDALIIYDDLTKQ 267
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST---------------KNGTITS 832
A ++S +L R P Y + +L ER + K G++T+
Sbjct: 268 AWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEKFTDGAVKGKTGSLTA 327
Query: 833 VQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEE 892
+ I A D++ P+ + D I L + G+ PA++ S S+ + G
Sbjct: 328 LPVIETQAGDVSAFVPTNVISITDGQIFLETDMFNSGVRPAMNAGISVSR-----VGGAA 382
Query: 893 HYKV----ANEVKFYLQKYKEL 910
KV + ++ L +Y+EL
Sbjct: 383 QTKVIKKLSGGIRTALAQYREL 404
>gi|220936462|ref|YP_002515361.1| F0F1 ATP synthase subunit alpha [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|254808122|sp|B8GRC0.1|ATPA_THISH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|219997772|gb|ACL74374.1| H(+)-transporting two-sector ATPase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 513
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 230/404 (56%), Positives = 304/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D K++ +G CT +I E+PVG LLGR+VNS G +D K +EKI
Sbjct: 73 AVVLGDYKHIKEGDTARCTGRILEVPVGEALLGRVVNSLGMAVDGKGAIDTSLTSPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG+++R+SV++P+ TG+K+ID+M+PIG+GQRELIIGDRQTGKT +A+D IINQK V
Sbjct: 133 APGVIERQSVDQPVQTGLKAIDAMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK SS+ NV+ KL+ + +++T++VAATA++SAA Q+I+PY GC +GEYFRD
Sbjct: 193 CIYVAVGQKASSIANVVTKLEQHGALEHTIIVAATASESAAMQFIAPYAGCAMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LIIYDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++EK
Sbjct: 253 GQDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERASRVNAEYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN GL
Sbjct: 313 TNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGL 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G +R+ LAQYREL +FS+F+SDLD +T+ QL G++++ LMK
Sbjct: 373 SVSRVGGAAQTKIIKKLGGGVRLALAQYRELAAFSQFASDLDELTRKQLERGKRVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q S+ E+ L + + K++ FE ++ + R
Sbjct: 433 QGQFSPMSVAEMAFSLFAANEGYLDDVDAKKVVDFEKAMLDFLR 476
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 153/342 (44%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ IK TG+ + PVG+ LGR++N LG +D KG I++ SPI
Sbjct: 71 VGAVVLGDYKHIKEGDTARCTGRILEVPVGEALLGRVVNSLGMAVDGKGAIDTSLTSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GKT ++ I I
Sbjct: 131 KIAPGVIERQSVDQPVQTGLKAIDAMVPIGRGQRELIIGDRQTGKTAVAVDAI----INQ 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ VG+++ + ++++ L+ ++ +E + + G ++
Sbjct: 187 KGTGVKCIYVAVGQKASSIANVVTKLEQHGALEHTIIVAATASESAAMQFIAPYAGCAMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A +VS +L R P Y + +L ER S
Sbjct: 247 EYFRDRGQDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERASRVNA 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + GI P
Sbjct: 307 EYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
AI+ S S+ + G K+ + V+ L +Y+EL
Sbjct: 367 AINAGLSVSR-----VGGAAQTKIIKKLGGGVRLALAQYREL 403
>gi|244538838|dbj|BAH82881.1| F0F1 ATP synthase subunit beta [Candidatus Ishikawaella capsulata
Mpkobe]
Length = 468
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 244/352 (69%), Positives = 285/352 (80%), Gaps = 7/352 (1%)
Query: 568 FRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLG 625
+ + +KNN + I +VQQQ+G +VRTIA G++ G+KR VVD + I PVG TLG
Sbjct: 30 YNALEVKNNNTYLILEVQQQLGGGVVRTIAMGSSEGLKRKLKVVDLKRQINVPVGKATLG 89
Query: 626 RILNVLGDPIDNKGEINSKKKS-----PIHTLPPKFSNQIFNNNILETGIKVIDLLCPFL 680
RI+NVLGDPID KG+I + S I+ P + + + ILETGIKVIDL+CPF
Sbjct: 90 RIVNVLGDPIDKKGKIQKEDGSEPERWSIYRSAPCYKDLTTSQEILETGIKVIDLICPFA 149
Query: 681 KGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD 740
KGGK+GLFGGAGVGKTVNMMELIRNIA+EH G SVF GVGER+REGNDFYHEM SNVLD
Sbjct: 150 KGGKVGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFTGVGERTREGNDFYHEMISSNVLD 209
Query: 741 KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGR 800
KVSL+YGQMNEP GNRLRVALTGL+IAE+FR+ G DVLLFIDNIYR+TLAGTEVSA+LGR
Sbjct: 210 KVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGNDVLLFIDNIYRYTLAGTEVSALLGR 269
Query: 801 TPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIV 860
PSAVGYQPTLAEEMG LQERI+ST G+ITS+QA+YVPADDLTDPSP+TTF HLDST+
Sbjct: 270 VPSAVGYQPTLAEEMGMLQERITSTTKGSITSIQAVYVPADDLTDPSPATTFAHLDSTVT 329
Query: 861 LSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LSRQIA LGIYPA+DPL S S+QLDP +VG+EHY A V+ LQ+Y+ELKD
Sbjct: 330 LSRQIASLGIYPAVDPLTSTSRQLDPLLVGQEHYDTARSVQSILQRYQELKD 381
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 141/334 (42%), Gaps = 28/334 (8%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKN-----RETVEKIAP 229
+ L + K ++ +PVG LGRIVN G+ ID K K ++ R ++ + AP
Sbjct: 64 EGLKRKLKVVDLKRQINVPVGKATLGRIVNVLGDPIDKKGKIQKEDGSEPERWSIYRSAP 123
Query: 230 GIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVIC 288
D + E L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 124 CYKDLTTSQEILETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAVEHSGYS 183
Query: 289 IYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLG 348
++ +G++ + +++ N +D +V + + TG TI E FRD G
Sbjct: 184 VFTGVGERTREGNDFYHEMISSNVLDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEG 243
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
D L+ D++ ++ A ++S LL R P + + L ER + K
Sbjct: 244 NDVLLFIDNIYRYTLAGTEVSALLGRVPSAVGYQPTLAEEMGMLQERITSTTK------- 296
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
G++T+ + D+T P + D + L + + PA++ S S
Sbjct: 297 ------GSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLTSTS 350
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
R + G Y + ++ +L +Y+EL+
Sbjct: 351 RQLDPLLVGQEHYDTARS----VQSILQRYQELK 380
>gi|254804251|ref|YP_003082472.1| F0F1 ATP synthase subunit beta [Neisseria meningitidis alpha14]
gi|421543182|ref|ZP_15989279.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM255]
gi|421545249|ref|ZP_15991313.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM140]
gi|421547297|ref|ZP_15993335.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM183]
gi|421548269|ref|ZP_15994297.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM2781]
gi|421553504|ref|ZP_15999465.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM576]
gi|421555652|ref|ZP_16001579.1| ATP synthase F1, beta subunit [Neisseria meningitidis 98008]
gi|421557923|ref|ZP_16003819.1| ATP synthase F1, beta subunit [Neisseria meningitidis 80179]
gi|421566250|ref|ZP_16012006.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM3081]
gi|433537544|ref|ZP_20494039.1| ATP synthase F1, beta subunit [Neisseria meningitidis 77221]
gi|254667793|emb|CBA03755.1| ATP synthase beta chain [Neisseria meningitidis alpha14]
gi|402315388|gb|EJU50952.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM255]
gi|402321326|gb|EJU56801.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM140]
gi|402321660|gb|EJU57133.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM183]
gi|402326991|gb|EJU62389.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM2781]
gi|402327992|gb|EJU63374.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM576]
gi|402329112|gb|EJU64474.1| ATP synthase F1, beta subunit [Neisseria meningitidis 98008]
gi|402333364|gb|EJU68669.1| ATP synthase F1, beta subunit [Neisseria meningitidis 80179]
gi|402340859|gb|EJU76050.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM3081]
gi|432271309|gb|ELL26435.1| ATP synthase F1, beta subunit [Neisseria meningitidis 77221]
Length = 465
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/365 (64%), Positives = 287/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + + L N +VQQ +G+ +VRTIA G+++G+KR V +TG
Sbjct: 13 VVDVEFPRDMIPRVYDALKLDENGLTLEVQQLLGDGVVRTIAMGSSDGLKRGMTVNNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG P+D G I++ K IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQAAPKFDELSSTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 151/363 (41%), Gaps = 35/363 (9%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G T +PVG LGRIV+ G +D + + AP + S
Sbjct: 61 LKRGMTVNNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQAAPKFDELSS 120
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G+
Sbjct: 121 TTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGE 180
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQ 349
+ + +++K N +D +V + + TG T+ EYFRD G+
Sbjct: 181 RTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGR 240
Query: 350 DCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKI 409
D L D++ ++ A ++S LL R P + + RL ER I
Sbjct: 241 DVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------I 287
Query: 410 FNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 288 TSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSR 347
Query: 470 -----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLM 524
V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 348 QLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVMR 397
Query: 525 KQK 527
+K
Sbjct: 398 ARK 400
>gi|192362476|ref|YP_001984262.1| F0F1 ATP synthase subunit alpha [Cellvibrio japonicus Ueda107]
gi|226739855|sp|B3PIS9.1|ATPA_CELJU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|190688641|gb|ACE86319.1| ATP synthase F1, alpha subunit [Cellvibrio japonicus Ueda107]
Length = 514
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 228/404 (56%), Positives = 309/404 (76%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D + + +GQKC CT +I E+PVG ELLGR+V++ G ID K + VEKI
Sbjct: 74 AVILGDYRGVAEGQKCKCTGRILEVPVGPELLGRVVDALGNPIDGKGPINTSQTDAVEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ G+K+ID+M+PIG+GQRELIIGDRQ GKT IA+D IINQK +
Sbjct: 134 APGVIWRKSVDQPVQIGLKAIDAMVPIGRGQRELIIGDRQIGKTAIAVDAIINQKGSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ +V+ KL+ + MD+T+V+AATA+D AA Q+++P+ GCT+GEYFRD
Sbjct: 194 CIYVAIGQKASSIASVVRKLEEHGAMDHTIVIAATASDPAAMQFLAPFAGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LIIYDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++++ ++EK
Sbjct: 254 GQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVSEEYVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL++++FN+ RP++N G+
Sbjct: 314 TNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESSMFNAGVRPSMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKLSG IR LAQYREL +FS+F+SDLD TK+QL +G++++ LMK
Sbjct: 374 SVSRVGGAAQTKVIKKLSGGIRTALAQYRELAAFSQFASDLDEATKSQLEHGQRVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK S+ ++ ++L I + ++ FE ++ + +
Sbjct: 434 QKQFAPLSVAQMALVLYAANEGHLKDIEVNKVLDFEAALLSFAK 477
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 153/342 (44%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ G+ TG+ + PVG LGR+++ LG+PID KG IN+ + +
Sbjct: 72 VGAVILGDYRGVAEGQKCKCTGRILEVPVGPELLGRVVDALGNPIDGKGPINTSQTDAVE 131
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++ G+K ID + P +G + + G +GKT ++ I I
Sbjct: 132 KIAPGVIWRKSVDQPVQIGLKAIDAMVPIGRGQRELIIGDRQIGKTAIAVDAI----INQ 187
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG + ++ +G+++ +++E +D +I ++P+ + G ++
Sbjct: 188 KGSGIKCIYVAIGQKASSIASVVRKLEEHGAMDHTIVIAATASDPAAMQFLAPFAGCTMG 247
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER S
Sbjct: 248 EYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVSE 307
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
+ G++T++ I A D++ P+ + D I L + G+ P
Sbjct: 308 EYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESSMFNAGVRP 367
Query: 873 AIDPLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
+++ S S+ + G KV + ++ L +Y+EL
Sbjct: 368 SMNAGISVSR-----VGGAAQTKVIKKLSGGIRTALAQYREL 404
>gi|389871052|ref|YP_006378471.1| F0F1 ATP synthase subunit beta [Advenella kashmirensis WT001]
gi|388536301|gb|AFK61489.1| F0F1 ATP synthase subunit beta [Advenella kashmirensis WT001]
Length = 466
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/357 (66%), Positives = 289/357 (80%), Gaps = 7/357 (1%)
Query: 563 NIIKYFRIINLKNNIS-------INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPI 615
N+ K + + L +N S +VQQQ+G+ +VRTIA G+++G++R V T I
Sbjct: 22 NMPKVYEALVLADNESKFAEKGLTLEVQQQLGDGVVRTIAMGSSDGLRRGMAVGRTNAAI 81
Query: 616 LTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDL 675
PVG+ TLGRI++VLG PID G I ++++ IH PKF + +LETGIKVIDL
Sbjct: 82 SVPVGEATLGRIMDVLGRPIDEAGPIATEERRAIHQSAPKFDELSPSVELLETGIKVIDL 141
Query: 676 LCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKE 735
+CPF KGGK+GLFGGAGVGKTVNMMELI NIA +H G SVF GVGER+REGNDFYHEM+E
Sbjct: 142 VCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVGERTREGNDFYHEMEE 201
Query: 736 SNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVS 795
SNVLDKV++++GQMNEP GNRLRVALTGL++AE+FR+ G+D+L F+DNIYR+TLAGTEVS
Sbjct: 202 SNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVS 261
Query: 796 AMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHL 855
A+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HL
Sbjct: 262 ALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFQHL 321
Query: 856 DSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKEL+D
Sbjct: 322 DSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGEEHYAVARGVQQTLQRYKELRD 378
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 148/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID + R + + AP +
Sbjct: 67 GLRRGMAVGRTNAAISVPVGEATLGRIMDVLGRPIDEAGPIATEERRAIHQSAPKFDELS 126
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 127 PSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 186
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 187 ERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFF 246
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 247 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 293
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 294 GSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQ 353
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y + + ++ L +Y+EL +L K + KI + Q
Sbjct: 354 VVGEEHYAVARG----VQQTLQRYKELRDIIAILGMDELSPEDKQAVARARKIQRFLSQP 409
Query: 528 PH 529
H
Sbjct: 410 FH 411
>gi|410422056|ref|YP_006902505.1| ATP synthase subunit alpha [Bordetella bronchiseptica MO149]
gi|427820083|ref|ZP_18987146.1| ATP synthase alpha chain [Bordetella bronchiseptica D445]
gi|427822672|ref|ZP_18989734.1| ATP synthase alpha chain [Bordetella bronchiseptica Bbr77]
gi|408449351|emb|CCJ61039.1| ATP synthase alpha chain [Bordetella bronchiseptica MO149]
gi|410571083|emb|CCN19292.1| ATP synthase alpha chain [Bordetella bronchiseptica D445]
gi|410587937|emb|CCN02987.1| ATP synthase alpha chain [Bordetella bronchiseptica Bbr77]
Length = 513
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 230/404 (56%), Positives = 308/404 (76%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++G + T +I E+PVG EL GR+VN+ G+ ID K + +EK+
Sbjct: 73 AVVLGDYTGVSEGDQVKTTGRILEVPVGPELKGRVVNTLGDAIDGKGPINTTQTDIIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R SV++PL TGIK+IDSM+PIG+GQRELIIGDRQTGKT +A+DTII+QK K V
Sbjct: 133 APGVIARRSVSQPLQTGIKAIDSMVPIGRGQRELIIGDRQTGKTAVAVDTIISQKGKGVT 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ + M+YT+VVAATA+DSAA QY++ Y GCT+GEYFRD
Sbjct: 193 CVYVAIGQKASTINNVVRKLEEHGAMEYTIVVAATASDSAAMQYLAAYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER++++N+ ++EK
Sbjct: 253 GEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGVRPAINAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKLSG IR LAQYREL +F++F+SDLD T+ QL G+++ L+K
Sbjct: 373 SVSRVGGAAQTKVIKKLSGGIRTDLAQYRELAAFAQFASDLDDATRRQLERGKRVVELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q ++ + EL + L + N + + + QI FE ++ + +
Sbjct: 433 QPQYQPLQVWELAVSLYAVNNGYLDDVDVAQILAFEKSLKDHLK 476
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 157/340 (46%), Gaps = 27/340 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ G+ V TG+ + PVG GR++N LGD ID KG IN+ + I
Sbjct: 71 VGAVVLGDYTGVSEGDQVKTTGRILEVPVGPELKGRVVNTLGDAIDGKGPINTTQTDIIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TGIK ID + P +G + + G GKT ++ I I+ +
Sbjct: 131 KVAPGVIARRSVSQPLQTGIKAIDSMVPIGRGQRELIIGDRQTGKTAVAVDTI--ISQKG 188
Query: 711 KGCS-VFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEE 769
KG + V++ +G+++ N+ +++E ++ ++ ++ + + A G ++ E
Sbjct: 189 KGVTCVYVAIGQKASTINNVVRKLEEHGAMEYTIVVAATASDSAAMQYLAAYAGCTMGEY 248
Query: 770 FRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST---- 825
FR+ G+D L+ D++ + A +VS +L R P Y + +L ER +
Sbjct: 249 FRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEY 308
Query: 826 -----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
K G++T++ I A D++ P+ + D I L + G+ PAI
Sbjct: 309 VEKFTNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGVRPAI 368
Query: 875 DPLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
+ S S+ + G KV + ++ L +Y+EL
Sbjct: 369 NAGISVSR-----VGGAAQTKVIKKLSGGIRTDLAQYREL 403
>gi|416189194|ref|ZP_11615156.1| ATP synthase F1, beta subunit [Neisseria meningitidis M0579]
gi|325135527|gb|EGC58145.1| ATP synthase F1, beta subunit [Neisseria meningitidis M0579]
Length = 465
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/365 (64%), Positives = 287/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + + L N +VQQ +G+ +VRTIA G+++G+KR V +TG
Sbjct: 13 VVDVEFPRDMIPRVYDALKLDENGLTLEVQQLLGDGVVRTIAMGSSDGLKRGMTVNNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG P+D G I++ K IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSCAIHQAAPKFDELSSTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 151/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRIV+ G +D + + AP +
Sbjct: 60 GLKRGMTVNNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSCAIHQAAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 STTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|430376288|ref|ZP_19430691.1| F0F1 ATP synthase subunit beta [Moraxella macacae 0408225]
gi|429541519|gb|ELA09547.1| F0F1 ATP synthase subunit beta [Moraxella macacae 0408225]
Length = 466
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/362 (65%), Positives = 287/362 (79%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + ++N + +VQQQ+G+ IVRTIA G+T G+KR V +TG PI
Sbjct: 16 VEFDRQSVPKIYDALKVENTETTLEVQQQLGDGIVRTIAMGSTEGLKRGLPVSNTGNPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID GE+ + IH P + Q + +LETGIKVIDLL
Sbjct: 76 VPVGKGTLGRIMDVLGRPIDEAGEVQADTTWSIHREAPSYDEQSNSTELLETGIKVIDLL 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
VLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLA
Sbjct: 196 GVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLA 255
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+ST+ G+ITSVQA+YVPADDLTDPSP+T
Sbjct: 256 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTQTGSITSVQAVYVPADDLTDPSPAT 315
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLD+T+VLSR IA GIYPA+DPL+S S+QLDP ++GEEHY VA V+ LQ++KEL
Sbjct: 316 TFAHLDATVVLSRDIASQGIYPAVDPLDSTSRQLDPQVIGEEHYSVARGVQEVLQRFKEL 375
Query: 911 KD 912
KD
Sbjct: 376 KD 377
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 157/373 (42%), Gaps = 39/373 (10%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G ID + ++ + AP ++
Sbjct: 59 EGLKRGLPVSNTGNPISVPVGKGTLGRIMDVLGRPIDEAGEVQADTTWSIHREAPSYDEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +
Sbjct: 119 SNSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------L 347
G++ + +++K +D +V + + TG T+ EYFRD
Sbjct: 179 GERTREGNDFYHEMKDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D L+ D++ ++ A ++S LL R P V Y L E + ++
Sbjct: 239 GRDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QE 285
Query: 408 KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSV 467
+I + G++T+ + D+T P + D + L ++ + PA++ S
Sbjct: 286 RITSTQTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDST 345
Query: 468 SR-----VGGAAQYKIVKKLSGDIRIMLAQYRELES------FSKFSSDLDIVTKTQLYN 516
SR V G Y + + ++ +L +++EL+ + S D +V +Y
Sbjct: 346 SRQLDPQVIGEEHYSVARG----VQEVLQRFKELKDIIAILGMDELSEDDKLV----VYR 397
Query: 517 GEKISLLMKQKPH 529
KI + Q H
Sbjct: 398 ARKIQRFLSQPFH 410
>gi|52843177|ref|YP_096976.1| ATP synthase F0F1 subunit alpha [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54298988|ref|YP_125357.1| F0F1 ATP synthase subunit alpha [Legionella pneumophila str. Paris]
gi|296108665|ref|YP_003620366.1| F-type H -transporting ATPase alpha chain [Legionella pneumophila
2300/99 Alcoy]
gi|378778866|ref|YP_005187308.1| F0F1-ATPase subunit alpha, ATP synthase alpha chain [Legionella
pneumophila subsp. pneumophila ATCC 43290]
gi|397665603|ref|YP_006507141.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Legionella
pneumophila subsp. pneumophila]
gi|397668667|ref|YP_006510204.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Legionella
pneumophila subsp. pneumophila]
gi|81601604|sp|Q5X0P1.1|ATPA2_LEGPA RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
synthase F1 sector subunit alpha 2; AltName:
Full=F-ATPase subunit alpha 2
gi|81603141|sp|Q5ZR99.1|ATPA2_LEGPH RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
synthase F1 sector subunit alpha 2; AltName:
Full=F-ATPase subunit alpha 2
gi|52630288|gb|AAU29029.1| F0F1-ATPase subunit alpha, ATP synthase alpha chain [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|53752773|emb|CAH14208.1| hypothetical protein lpp3055 [Legionella pneumophila str. Paris]
gi|295650567|gb|ADG26414.1| F-type H -transporting ATPase alpha chain [Legionella pneumophila
2300/99 Alcoy]
gi|307611868|emb|CBX01584.1| hypothetical protein LPW_32711 [Legionella pneumophila 130b]
gi|364509684|gb|AEW53208.1| F0F1-ATPase subunit alpha, ATP synthase alpha chain [Legionella
pneumophila subsp. pneumophila ATCC 43290]
gi|395129014|emb|CCD07237.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Legionella
pneumophila subsp. pneumophila]
gi|395132078|emb|CCD10373.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Legionella
pneumophila subsp. pneumophila]
Length = 517
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 232/404 (57%), Positives = 306/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D L +GQK CT +I E+PVG LLGR+V++ G ID K +EK+
Sbjct: 77 AVILGDSSTLAEGQKGKCTGRILEVPVGKGLLGRVVDALGNPIDGKGPIESSGMSPIEKV 136
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+K+ID+MIP+G+GQRELIIGDRQTGKT IAID IINQK V
Sbjct: 137 APGVITRKSVDQPVQTGLKAIDAMIPVGRGQRELIIGDRQTGKTAIAIDAIINQKGTGVK 196
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK SS+ +++ KL+ + +++T+VV A A+DSAA QYI+PY+GCT+GEYF +
Sbjct: 197 CVYVAIGQKASSVASIVRKLEEHGALEHTIVVVAGASDSAALQYIAPYSGCTMGEYFMER 256
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGD+FYLHSRLLER+++IN +EK
Sbjct: 257 GEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDIFYLHSRLLERAARINADEVEKL 316
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFLD +LFNS RPAIN GL
Sbjct: 317 TNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLDVDLFNSGVRPAINSGL 376
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G R+ LAQ+RELE+FS+F+SDLD T+ QL G++I+ LMK
Sbjct: 377 SVSRVGGAAQTKIMKKLGGGTRLALAQFRELEAFSQFASDLDDATRKQLERGQRITELMK 436
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK + ++ E+ + L +++ + +P+ +I FE ++ Y R
Sbjct: 437 QKQYSPLTVAEMGVSLFVVEKGYLDDVPVNEISSFEASLHDYMR 480
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 147/323 (45%), Gaps = 31/323 (9%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + PVG LGR+++ LG+PID KG I S SPI + P + + ++TG+
Sbjct: 95 TGRILEVPVGKGLLGRVVDALGNPIDGKGPIESSGMSPIEKVAPGVITRKSVDQPVQTGL 154
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCS---VFIGVGERSREGN 727
K ID + P +G + + G GKT ++ I I KG V++ +G+++
Sbjct: 155 KAIDAMIPVGRGQRELIIGDRQTGKTAIAIDAI----INQKGTGVKCVYVAIGQKASSVA 210
Query: 728 DFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRF 787
+++E L+ ++ ++ + + +G ++ E F G+D L+ D++ +
Sbjct: 211 SIVRKLEEHGALEHTIVVVAGASDSAALQYIAPYSGCTMGEYFMERGEDALIVYDDLTKQ 270
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTL---------------AEEMGKLQERISSTKNGTITS 832
A ++S +L R P Y + A+E+ KL K G++T+
Sbjct: 271 AWAYRQISLLLRRPPGREAYPGDIFYLHSRLLERAARINADEVEKLTNGEVKGKTGSLTA 330
Query: 833 VQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEE 892
+ I A D++ P+ + D I L + G+ PAI+ S S+ + G
Sbjct: 331 LPIIETQAGDVSAFVPTNVISITDGQIFLDVDLFNSGVRPAINSGLSVSR-----VGGAA 385
Query: 893 HYKVANEV----KFYLQKYKELK 911
K+ ++ + L +++EL+
Sbjct: 386 QTKIMKKLGGGTRLALAQFRELE 408
>gi|192359136|ref|YP_001984260.1| F0F1 ATP synthase subunit beta [Cellvibrio japonicus Ueda107]
gi|226740176|sp|B3PIS7.1|ATPB_CELJU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|190685301|gb|ACE82979.1| ATP synthase F1, beta subunit [Cellvibrio japonicus Ueda107]
Length = 459
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 235/346 (67%), Positives = 287/346 (82%), Gaps = 1/346 (0%)
Query: 567 YFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGR 626
Y ++ + N+++ +VQQQ+G+ +VRTIA G++ G++R V +T +PI PVG TLGR
Sbjct: 27 YDALVISEGNLTL-EVQQQLGDGVVRTIALGSSEGLRRGLSVTNTNEPIKVPVGTQTLGR 85
Query: 627 ILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIG 686
I++VLG+PID G I +++ IH P + + +LETGIKVIDL+CPF KGGK+G
Sbjct: 86 IMDVLGNPIDEAGPIGEQERMQIHRAAPAYEELAASEELLETGIKVIDLVCPFAKGGKVG 145
Query: 687 LFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIY 746
LFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFYHEMK+SNV+DKV+++Y
Sbjct: 146 LFGGAGVGKTVNMMELINNIAKEHSGLSVFAGVGERTREGNDFYHEMKDSNVVDKVAMVY 205
Query: 747 GQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVG 806
GQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVG
Sbjct: 206 GQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVG 265
Query: 807 YQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIA 866
YQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLDST+VLSR IA
Sbjct: 266 YQPTLAEEMGVLQERITSTKIGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIA 325
Query: 867 ELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
GIYPAIDPL+S S+QLDP ++G EHY VA V+ LQ+YKELKD
Sbjct: 326 AKGIYPAIDPLDSTSRQLDPMVIGNEHYLVARGVQSVLQRYKELKD 371
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 147/329 (44%), Gaps = 23/329 (6%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T + ++PVG + LGRI++ G ID + R + + AP +
Sbjct: 59 EGLRRGLSVTNTNEPIKVPVGTQTLGRIMDVLGNPIDEAGPIGEQERMQIHRAAPAYEEL 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +
Sbjct: 119 AASEELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++K N +D +V + + TG T+ E FRD G+D L+
Sbjct: 179 GERTREGNDFYHEMKDSNVVDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 239 FVDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTK 285
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P + D + L ++ PAI+ S SR
Sbjct: 286 IGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAIDPLDSTSRQLDP 345
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + + ++ +L +Y+EL+
Sbjct: 346 MVIGNEHYLVARG----VQSVLQRYKELK 370
>gi|329894814|ref|ZP_08270614.1| ATP synthase alpha chain [gamma proteobacterium IMCC3088]
gi|328922708|gb|EGG30042.1| ATP synthase alpha chain [gamma proteobacterium IMCC3088]
Length = 514
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/404 (57%), Positives = 306/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D K+L +GQ C CT +I E+PVG EL GR+V++ G ID K + +EK+
Sbjct: 74 AVVLGDYKSLAEGQTCRCTGRILEVPVGPELQGRVVDALGNPIDGKGPVAATATDAIEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ G+K+ID+M+PIG+GQRELIIGDRQ GKT IA+D IINQKN +
Sbjct: 134 APGVIARQSVDQPVQIGLKAIDAMVPIGRGQRELIIGDRQIGKTAIAVDAIINQKNTGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ V+ KL+ + MD+T+VVAATA+D A+ Q+++P+ GCT+GEY+RD
Sbjct: 194 CIYVAIGQKASSVAAVVRKLEEHGAMDHTIVVAATASDPASMQFLAPFAGCTMGEYYRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LIIYDDLTK A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N ++E+
Sbjct: 254 GQDALIIYDDLTKQAIAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEQF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA P+IET GDV++F+PTNVISITDGQIFL+T++FNS RPA+N G+
Sbjct: 314 TNGEVKGQTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLETDMFNSGVRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKLSG IR LAQYREL +FS+F+SDLD TK QL +GE+++ LMK
Sbjct: 374 SVSRVGGAAQTKIMKKLSGGIRTALAQYRELAAFSQFASDLDEATKAQLDHGERVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK + SI E+ I+L + I + +I FE ++ Y
Sbjct: 434 QKQYSPRSIAEMGIMLYAANEGYLKDIEVAKILPFEDALLAYMH 477
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 149/339 (43%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ + TG+ + PVG GR+++ LG+PID KG + + I
Sbjct: 72 VGAVVLGDYKSLAEGQTCRCTGRILEVPVGPELQGRVVDALGNPIDGKGPVAATATDAIE 131
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++ G+K ID + P +G + + G +GKT ++ I N
Sbjct: 132 KVAPGVIARQSVDQPVQIGLKAIDAMVPIGRGQRELIIGDRQIGKTAIAVDAIINQKNTG 191
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ +++E +D ++ ++P+ + G ++ E +
Sbjct: 192 IKC-IYVAIGQKASSVAAVVRKLEEHGAMDHTIVVAATASDPASMQFLAPFAGCTMGEYY 250
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + +A ++S +L R P Y + +L ER +
Sbjct: 251 RDRGQDALIIYDDLTKQAIAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYV 310
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
+ G++T++ I A D++ P+ + D I L + G+ PA++
Sbjct: 311 EQFTNGEVKGQTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLETDMFNSGVRPAMN 370
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G K+ + ++ L +Y+EL
Sbjct: 371 AGISVSR-----VGGAAQTKIMKKLSGGIRTALAQYREL 404
>gi|71909723|ref|YP_287310.1| ATP synthase F0F1 subunit beta [Dechloromonas aromatica RCB]
gi|118573524|sp|Q477Z1.1|ATPB_DECAR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|71849344|gb|AAZ48840.1| ATP synthase F1 subcomplex beta subunit [Dechloromonas aromatica
RCB]
Length = 466
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V +TG I PVG TLGRI++VLG PID G
Sbjct: 48 EVQQQLGDGVVRTIAMGSSDGLRRGMKVNNTGAGISVPVGMGTLGRIMDVLGRPIDEAGP 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+S + IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IDSTELRVIHQPAPKFDELSSSVDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQHAGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQE
Sbjct: 228 LTGLTMAERFRDDGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIASLGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VGEEHY VA V+ LQ+YKEL+D
Sbjct: 348 SRQLDPQVVGEEHYSVARAVQMNLQRYKELRD 379
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 136/327 (41%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T +PVG LGRI++ G ID + + AP +
Sbjct: 68 GLRRGMKVNNTGAGISVPVGMGTLGRIMDVLGRPIDEAGPIDSTELRVIHQPAPKFDELS 127
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S + L TGIK ID + P KG + + G GKT ++ I N K + ++ +G
Sbjct: 128 SSVDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHAGLSVFAGVG 187
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 188 ERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDDGRDILFF 247
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + RL ER I +
Sbjct: 248 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKV 294
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 295 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQ 354
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + + +++ L +Y+EL
Sbjct: 355 VVGEEHYSVARA----VQMNLQRYKEL 377
>gi|430809338|ref|ZP_19436453.1| F0F1 ATP synthase subunit alpha [Cupriavidus sp. HMR-1]
gi|429498221|gb|EKZ96734.1| F0F1 ATP synthase subunit alpha [Cupriavidus sp. HMR-1]
Length = 513
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/418 (55%), Positives = 314/418 (75%), Gaps = 4/418 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++++G CT +I E+PVG ELLGR+VN+ G+ ID K K + +EK+
Sbjct: 73 AVVLGEYEHISEGDTVKCTGRILEVPVGKELLGRVVNTLGQPIDGKGPINAKETDVIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KSID+M+PIG+GQRELIIGDRQTGKT +A+D+IINQK K V
Sbjct: 133 APGVIARQSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGKTAVAVDSIINQKGKGVF 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ + M+YT+VVAATA+DSAA QY++ Y GCT+GEYFRD
Sbjct: 193 CVYVAIGQKASTISNVVRKLEEHGAMEYTIVVAATASDSAAMQYLAAYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER++++N+ ++ K
Sbjct: 253 GEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNEDYVAKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA P+IET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TNGAVTGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K+VKKLSG IR LAQYREL +F++F+SDLD T+ QL G +++ L+K
Sbjct: 373 SVSRVGGAAQTKVVKKLSGGIRTDLAQYRELAAFAQFASDLDDATRKQLERGRRVTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF--RIINLKNNISINK 581
Q ++ + +L L N F + +K I FE + + + +L N I K
Sbjct: 433 QPQYQPLQVWQLAASLYAANNGFLDNVDVKDILPFEKGLHDHLKTKFADLVNRIEDTK 490
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 155/342 (45%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I V TG+ + PVG LGR++N LG PID KG IN+K+ I
Sbjct: 71 VGAVVLGEYEHISEGDTVKCTGRILEVPVGKELLGRVVNTLGQPIDGKGPINAKETDVIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GKT ++ I I
Sbjct: 131 KVAPGVIARQSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGKTAVAVDSI----INQ 186
Query: 711 KGCSVF---IGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG VF + +G+++ ++ +++E ++ ++ ++ + + A G ++
Sbjct: 187 KGKGVFCVYVAIGQKASTISNVVRKLEEHGAMEYTIVVAATASDSAAMQYLAAYAGCTMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERIS---- 823
E FR+ G+D L+ D++ + A +VS +L R P Y + +L ER +
Sbjct: 247 EYFRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNE 306
Query: 824 -----------STKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
+ K G++T++ I A D++ P+ + D I L + GI P
Sbjct: 307 DYVAKFTNGAVTGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
AI+ S S+ + G KV + ++ L +Y+EL
Sbjct: 367 AINAGISVSR-----VGGAAQTKVVKKLSGGIRTDLAQYREL 403
>gi|325915883|ref|ZP_08178179.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas vesicatoria
ATCC 35937]
gi|325537850|gb|EGD09550.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas vesicatoria
ATCC 35937]
Length = 468
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/362 (64%), Positives = 286/362 (79%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + + ++ +VQQQ+G+ +VRTIA G+T+G+KRN + +T + I
Sbjct: 16 VEFQRNEVPKVYHALKVEGTEITLEVQQQLGDGVVRTIALGSTDGLKRNLLATNTERAIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G++ + IH P + +Q + +LETGIKVIDL+
Sbjct: 76 VPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRTAPSYEDQSSSTELLETGIKVIDLM 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
NVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLF+DNIYR+TLA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLA 255
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+T
Sbjct: 256 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPAT 315
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLDST+ LSR IA LGIYPA+DPL+S S+Q+DP ++G EHY A V+ LQKYKEL
Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGTEHYDTAQRVQQTLQKYKEL 375
Query: 911 KD 912
KD
Sbjct: 376 KD 377
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 140/324 (43%), Gaps = 29/324 (8%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
TE+ +PVG LGRI++ G ID + + + AP D+ S E L TGI
Sbjct: 70 TERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRTAPSYEDQSSSTELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 130 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDL 358
+++K N +D +V + + TG T+ EYFRD G+D L+ D++
Sbjct: 190 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNI 249
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P + + L ER I + +G++T
Sbjct: 250 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQER-------------ITSTKSGSIT 296
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L N+ + PA++ S SR V G
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGT 356
Query: 474 AQYKIVKKLSGDIRIMLAQYRELE 497
Y ++ ++ L +Y+EL+
Sbjct: 357 EHYDTAQR----VQQTLQKYKELK 376
>gi|384420812|ref|YP_005630172.1| ATP synthase F1 subunit beta [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353463725|gb|AEQ98004.1| ATP synthase F1, beta subunit [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 468
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/362 (64%), Positives = 286/362 (79%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + + ++ +VQQQ+G+ +VRTIA G+T+G+KRN + +T + I
Sbjct: 16 VEFPRNEVPKVYHALKVEGTEITLEVQQQLGDGVVRTIALGSTDGLKRNLLATNTERAIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G++ + IH P + +Q + +LETGIKVIDL+
Sbjct: 76 VPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRSAPSYEDQSSSTELLETGIKVIDLM 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
NVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLF+DNIYR+TLA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDANGKGKDVLLFVDNIYRYTLA 255
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+T
Sbjct: 256 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPAT 315
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLDST+ LSR IA LGIYPA+DPL+S S+Q+DP ++G EHY A V+ LQKYKEL
Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375
Query: 911 KD 912
KD
Sbjct: 376 KD 377
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 140/324 (43%), Gaps = 29/324 (8%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
TE+ +PVG LGRI++ G ID + + + AP D+ S E L TGI
Sbjct: 70 TERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRSAPSYEDQSSSTELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 130 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDL 358
+++K N +D +V + + TG T+ EYFRD G+D L+ D++
Sbjct: 190 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDANGKGKDVLLFVDNI 249
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P + + L ER I + +G++T
Sbjct: 250 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQER-------------ITSTKSGSIT 296
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L N+ + PA++ S SR V G
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGH 356
Query: 474 AQYKIVKKLSGDIRIMLAQYRELE 497
Y ++ ++ L +Y+EL+
Sbjct: 357 EHYDTAQR----VQQTLQKYKELK 376
>gi|261379445|ref|ZP_05984018.1| ATP synthase F1, beta subunit [Neisseria subflava NJ9703]
gi|319638951|ref|ZP_07993709.1| ATP synthase subunit beta [Neisseria mucosa C102]
gi|284797899|gb|EFC53246.1| ATP synthase F1, beta subunit [Neisseria subflava NJ9703]
gi|317399855|gb|EFV80518.1| ATP synthase subunit beta [Neisseria mucosa C102]
Length = 465
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/365 (64%), Positives = 286/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + L N +VQQ +G+ +VRTIA G+++G+KR V +TG
Sbjct: 13 VVDVEFPRDAIPHVYDALKLDENGLTLEVQQLLGDGVVRTIAMGSSDGLKRGMSVSNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG P+D G I++ K IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQTAPKFDELSSTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 151/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRIV+ G +D + + AP +
Sbjct: 60 GLKRGMSVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQTAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 STTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|225075914|ref|ZP_03719113.1| hypothetical protein NEIFLAOT_00938 [Neisseria flavescens
NRL30031/H210]
gi|224952770|gb|EEG33979.1| hypothetical protein NEIFLAOT_00938 [Neisseria flavescens
NRL30031/H210]
Length = 465
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/365 (64%), Positives = 286/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + L N +VQQ +G+ +VRTIA G+++G+KR V +TG
Sbjct: 13 VVDVEFPRDAIPHVYDALKLDENGLTLEVQQLLGDGVVRTIAMGSSDGLKRGMSVSNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG P+D G I++ K IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQTAPKFDELSSTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 151/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRIV+ G +D + + AP +
Sbjct: 60 GLKRGMSVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQTAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 STTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|430376286|ref|ZP_19430689.1| F0F1 ATP synthase subunit alpha [Moraxella macacae 0408225]
gi|429541517|gb|ELA09545.1| F0F1 ATP synthase subunit alpha [Moraxella macacae 0408225]
Length = 514
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/404 (57%), Positives = 308/404 (76%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +L +GQK +CT +I E+PVG ELLGR+V++ G ID K K + VEKI
Sbjct: 74 AVVLGDYLSLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDGKGSINAKLTDKVEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR+SV+EP++TG KS+D+MIPIG+GQRELIIGDRQTGKT +AID II QK+ +
Sbjct: 134 APGVIDRQSVDEPVMTGYKSVDTMIPIGRGQRELIIGDRQTGKTAMAIDAIIAQKDSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK S++ NV+ KL+ + YT VV A+A++ A+ QYI+PY+GCT+GEYFRD
Sbjct: 194 CIYVAVGQKRSTIANVVRKLEETGALAYTTVVVASASEPASLQYIAPYSGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++EK
Sbjct: 254 GEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNADYVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+++LFNS RPA+N G+
Sbjct: 314 TGGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESSLFNSGIRPAVNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKLSG IR LAQYREL +F++F+SDLD T+ QL +G++++ LMK
Sbjct: 374 SVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFAQFASDLDDATRKQLDHGQRVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q + SI E ++ + +P+ ++ FE +++Y R
Sbjct: 434 QHQYAPMSIAEQAAVIYASNEGYLADVPVNKVGAFEAGLLRYLR 477
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 158/343 (46%), Gaps = 27/343 (7%)
Query: 588 ENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKS 647
++ V + G+ ++ TG+ + PVG LGR+++ LG+PID KG IN+K
Sbjct: 69 QDSVGAVVLGDYLSLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDGKGSINAKLTD 128
Query: 648 PIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIA 707
+ + P ++ + + TG K +D + P +G + + G GKT ++ I IA
Sbjct: 129 KVEKIAPGVIDRQSVDEPVMTGYKSVDTMIPIGRGQRELIIGDRQTGKTAMAIDAI--IA 186
Query: 708 IEHKGCS-VFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSI 766
+ G +++ VG++ + +++E+ L +++ +EP+ + +G ++
Sbjct: 187 QKDSGIKCIYVAVGQKRSTIANVVRKLEETGALAYTTVVVASASEPASLQYIAPYSGCTM 246
Query: 767 AEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST- 825
E FR+ G+D L+ D++ + +A ++S +L R P Y + +L ER S
Sbjct: 247 GEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVN 306
Query: 826 --------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIY 871
K G++T++ I A D++ P+ + D I L + GI
Sbjct: 307 ADYVEKFTGGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESSLFNSGIR 366
Query: 872 PAIDPLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
PA++ S S+ + G K+ + ++ L +Y+EL
Sbjct: 367 PAVNAGISVSR-----VGGAAQTKIIKKLSGGIRTALAQYREL 404
>gi|15677764|ref|NP_274928.1| ATP synthase F0F1 subunit beta [Neisseria meningitidis MC58]
gi|385329180|ref|YP_005883483.1| ATP synthase subunit beta [Neisseria meningitidis alpha710]
gi|385341221|ref|YP_005895092.1| ATP synthase F1 subunit beta [Neisseria meningitidis M01-240149]
gi|385853981|ref|YP_005900495.1| ATP synthase F1 subunit beta [Neisseria meningitidis H44/76]
gi|385856519|ref|YP_005903031.1| ATP synthase F1 subunit beta [Neisseria meningitidis NZ-05/33]
gi|416174546|ref|ZP_11609228.1| ATP synthase F1, beta subunit [Neisseria meningitidis OX99.30304]
gi|416198865|ref|ZP_11619232.1| ATP synthase F1, beta subunit [Neisseria meningitidis CU385]
gi|427826582|ref|ZP_18993632.1| ATP synthase F1, beta subunit [Neisseria meningitidis H44/76]
gi|433465908|ref|ZP_20423378.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM422]
gi|433489102|ref|ZP_20446251.1| ATP synthase F1, beta subunit [Neisseria meningitidis M13255]
gi|433491281|ref|ZP_20448393.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM418]
gi|433505784|ref|ZP_20462714.1| ATP synthase F1, beta subunit [Neisseria meningitidis 9506]
gi|433507918|ref|ZP_20464814.1| ATP synthase F1, beta subunit [Neisseria meningitidis 9757]
gi|433510107|ref|ZP_20466963.1| ATP synthase F1, beta subunit [Neisseria meningitidis 12888]
gi|433512147|ref|ZP_20468960.1| ATP synthase F1, beta subunit [Neisseria meningitidis 4119]
gi|81857552|sp|Q9JXQ2.1|ATPB_NEIMB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|7227192|gb|AAF42263.1| ATP synthase F1, beta subunit [Neisseria meningitidis MC58]
gi|308390032|gb|ADO32352.1| ATP synthase beta chain [Neisseria meningitidis alpha710]
gi|316985556|gb|EFV64503.1| ATP synthase F1, beta subunit [Neisseria meningitidis H44/76]
gi|325129472|gb|EGC52302.1| ATP synthase F1, beta subunit [Neisseria meningitidis OX99.30304]
gi|325139587|gb|EGC62127.1| ATP synthase F1, beta subunit [Neisseria meningitidis CU385]
gi|325200985|gb|ADY96440.1| ATP synthase F1, beta subunit [Neisseria meningitidis H44/76]
gi|325201427|gb|ADY96881.1| ATP synthase F1, beta subunit [Neisseria meningitidis M01-240149]
gi|325207408|gb|ADZ02860.1| ATP synthase F1, beta subunit [Neisseria meningitidis NZ-05/33]
gi|432200605|gb|ELK56695.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM422]
gi|432221098|gb|ELK76913.1| ATP synthase F1, beta subunit [Neisseria meningitidis M13255]
gi|432225415|gb|ELK81158.1| ATP synthase F1, beta subunit [Neisseria meningitidis NM418]
gi|432238919|gb|ELK94480.1| ATP synthase F1, beta subunit [Neisseria meningitidis 9506]
gi|432239128|gb|ELK94687.1| ATP synthase F1, beta subunit [Neisseria meningitidis 9757]
gi|432244842|gb|ELL00324.1| ATP synthase F1, beta subunit [Neisseria meningitidis 12888]
gi|432245044|gb|ELL00519.1| ATP synthase F1, beta subunit [Neisseria meningitidis 4119]
Length = 465
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/365 (64%), Positives = 286/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + + L N +VQQ +G+ +VR IA G+++G+KR V +TG
Sbjct: 13 VVDVEFPRDMIPRVYDALKLDENGLTLEVQQLLGDGVVRAIAMGSSDGLKRGMTVSNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG P+D G I++ K IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQAAPKFDELSSTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 154/372 (41%), Gaps = 35/372 (9%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L +G T +PVG LGRIV+ G +D + +
Sbjct: 52 AIAMGSSDGLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQA 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP + S E L TGIK ID + P KG + + G GKT ++ I N K +
Sbjct: 112 APKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSG 171
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
+ ++ +G++ + +++K N +D +V + + TG T+ EYFRD
Sbjct: 172 LSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRD 231
Query: 347 ------LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKIN 400
G+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 232 EKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER----- 286
Query: 401 KYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPA 460
I + G++T+ + D+T P + D + L ++ + PA
Sbjct: 287 --------ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPA 338
Query: 461 INVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLY 515
++ S SR V G Y + + ++ L +Y+EL + I+ +L
Sbjct: 339 VDPLDSTSRQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELS 388
Query: 516 NGEKISLLMKQK 527
+ +K++++ +K
Sbjct: 389 DEDKLTVMRARK 400
>gi|261400612|ref|ZP_05986737.1| ATP synthase F1, beta subunit [Neisseria lactamica ATCC 23970]
gi|313669152|ref|YP_004049436.1| ATP synthase beta chain [Neisseria lactamica 020-06]
gi|421863012|ref|ZP_16294714.1| ATP synthase F1, beta subunit [Neisseria lactamica Y92-1009]
gi|269209698|gb|EEZ76153.1| ATP synthase F1, beta subunit [Neisseria lactamica ATCC 23970]
gi|309379543|emb|CBX21909.1| ATP synthase F1, beta subunit [Neisseria lactamica Y92-1009]
gi|313006614|emb|CBN88080.1| ATP synthase beta chain [Neisseria lactamica 020-06]
Length = 465
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/365 (64%), Positives = 286/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + L N +VQQ +G+ +VRTIA G+++G+KR V +TG
Sbjct: 13 VVDVEFPRDAIPHVYDALKLDENGLTLEVQQLLGDGVVRTIAMGSSDGLKRGMSVSNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG P+D G I++ K IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQTAPKFDELSSTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 151/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRIV+ G +D + + AP +
Sbjct: 60 GLKRGMSVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQTAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 STTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|21244374|ref|NP_643956.1| ATP synthase F0F1 subunit beta [Xanthomonas axonopodis pv. citri
str. 306]
gi|294667261|ref|ZP_06732481.1| ATP synthase subunit B [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325924759|ref|ZP_08186196.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas perforans
91-118]
gi|346726417|ref|YP_004853086.1| F0F1 ATP synthase subunit beta [Xanthomonas axonopodis pv.
citrumelo F1]
gi|381170511|ref|ZP_09879667.1| ATP synthase F1, beta subunit [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|390990170|ref|ZP_10260460.1| ATP synthase F1, beta subunit [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|418517708|ref|ZP_13083867.1| F0F1 ATP synthase subunit beta [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|418520946|ref|ZP_13086993.1| F0F1 ATP synthase subunit beta [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|81860488|sp|Q8PGG7.1|ATPB_XANAC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|21110032|gb|AAM38492.1| ATP synthase beta chain [Xanthomonas axonopodis pv. citri str. 306]
gi|292602933|gb|EFF46364.1| ATP synthase subunit B [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325544851|gb|EGD16197.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas perforans
91-118]
gi|346651164|gb|AEO43788.1| F0F1 ATP synthase subunit beta [Xanthomonas axonopodis pv.
citrumelo F1]
gi|372555135|emb|CCF67435.1| ATP synthase F1, beta subunit [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|380688968|emb|CCG36154.1| ATP synthase F1, beta subunit [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|410703369|gb|EKQ61863.1| F0F1 ATP synthase subunit beta [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410705552|gb|EKQ64023.1| F0F1 ATP synthase subunit beta [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 468
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 232/338 (68%), Positives = 278/338 (82%), Gaps = 6/338 (1%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T+G+KRN + +T + I PVG TLGRI++VLG PID G+
Sbjct: 40 EVQQQLGDGVVRTIALGSTDGLKRNLVATNTERAISVPVGAGTLGRIMDVLGRPIDEAGD 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ + IH P + +Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 VQASDHWEIHRGAPSYEDQSSSTELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFYHEMK+SNVLDKV+++YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
LTGL++AE FR+ GKDVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 220 LTGLTMAEYFRDEKDASGKGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 279
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+TTF HLDST+ LSR IA LGIYPA+
Sbjct: 280 MGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAV 339
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+Q+DP ++G EHY A V+ LQKYKELKD
Sbjct: 340 DPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKELKD 377
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 140/324 (43%), Gaps = 29/324 (8%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
TE+ +PVG LGRI++ G ID + + + AP D+ S E L TGI
Sbjct: 70 TERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRGAPSYEDQSSSTELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 130 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDL 358
+++K N +D +V + + TG T+ EYFRD G+D L+ D++
Sbjct: 190 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKGKDVLLFVDNI 249
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P + + L ER I + +G++T
Sbjct: 250 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQER-------------ITSTKSGSIT 296
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L N+ + PA++ S SR V G
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGH 356
Query: 474 AQYKIVKKLSGDIRIMLAQYRELE 497
Y ++ ++ L +Y+EL+
Sbjct: 357 EHYDTAQR----VQQTLQKYKELK 376
>gi|54295822|ref|YP_128237.1| ATP synthase F0F1 subunit alpha [Legionella pneumophila str. Lens]
gi|81601134|sp|Q5WSG6.1|ATPA_LEGPL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|53755654|emb|CAH17156.1| hypothetical protein lpl2912 [Legionella pneumophila str. Lens]
Length = 517
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 231/404 (57%), Positives = 306/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D L +GQK CT +I E+PVG LLGR+V++ G ID K +EK+
Sbjct: 77 AVILGDSSTLAEGQKGKCTGRILEVPVGKGLLGRVVDALGNPIDGKGPIESSGMSPIEKV 136
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+K+ID+MIP+G+GQRELIIGDRQTGKT IAID IINQK V
Sbjct: 137 APGVITRKSVDQPVQTGLKAIDAMIPVGRGQRELIIGDRQTGKTAIAIDAIINQKGTGVK 196
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV +GQK SS+ +++ KL+ + +++T+VV A A+DSAA QYI+PY+GCT+GEYF +
Sbjct: 197 CVYVAVGQKASSVASIVRKLEEHGALEHTIVVVAGASDSAALQYIAPYSGCTMGEYFMER 256
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGD+FYLHSRLLER+++IN +EK
Sbjct: 257 GEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDIFYLHSRLLERAARINADEVEKL 316
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFLD +LFNS RPAIN GL
Sbjct: 317 TNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLDVDLFNSGVRPAINSGL 376
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G R+ LAQ+RELE+FS+F+SDLD T+ QL G++I+ LMK
Sbjct: 377 SVSRVGGAAQTKIMKKLGGGTRLALAQFRELEAFSQFASDLDDATRKQLERGQRITELMK 436
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK + ++ E+ + L +++ + +P+ +I FE ++ Y R
Sbjct: 437 QKQYSPLTVAEMGVSLFVVEKGYLDDVPVNEISSFEASLHDYMR 480
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 147/323 (45%), Gaps = 31/323 (9%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + PVG LGR+++ LG+PID KG I S SPI + P + + ++TG+
Sbjct: 95 TGRILEVPVGKGLLGRVVDALGNPIDGKGPIESSGMSPIEKVAPGVITRKSVDQPVQTGL 154
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCS---VFIGVGERSREGN 727
K ID + P +G + + G GKT ++ I I KG V++ VG+++
Sbjct: 155 KAIDAMIPVGRGQRELIIGDRQTGKTAIAIDAI----INQKGTGVKCVYVAVGQKASSVA 210
Query: 728 DFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRF 787
+++E L+ ++ ++ + + +G ++ E F G+D L+ D++ +
Sbjct: 211 SIVRKLEEHGALEHTIVVVAGASDSAALQYIAPYSGCTMGEYFMERGEDALIVYDDLTKQ 270
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTL---------------AEEMGKLQERISSTKNGTITS 832
A ++S +L R P Y + A+E+ KL K G++T+
Sbjct: 271 AWAYRQISLLLRRPPGREAYPGDIFYLHSRLLERAARINADEVEKLTNGEVKGKTGSLTA 330
Query: 833 VQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEE 892
+ I A D++ P+ + D I L + G+ PAI+ S S+ + G
Sbjct: 331 LPIIETQAGDVSAFVPTNVISITDGQIFLDVDLFNSGVRPAINSGLSVSR-----VGGAA 385
Query: 893 HYKVANEV----KFYLQKYKELK 911
K+ ++ + L +++EL+
Sbjct: 386 QTKIMKKLGGGTRLALAQFRELE 408
>gi|91777092|ref|YP_546848.1| F0F1 ATP synthase subunit beta [Methylobacillus flagellatus KT]
gi|118573696|sp|Q1GXN0.1|ATPB_METFK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|91711079|gb|ABE51007.1| ATP synthase F1, beta subunit [Methylobacillus flagellatus KT]
Length = 465
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 278/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G+ R V +TG I PVG TLGRI++VLG PID G
Sbjct: 46 EVQQQLGDGVVRTIAMGSSDGLSRGMKVKNTGSQIQVPVGHGTLGRIMDVLGRPIDEAGP 105
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + +K IH P F + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 106 IEADEKRSIHQKAPTFEELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 165
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV +++GQMNEP GNRLRVA
Sbjct: 166 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVGMVFGQMNEPPGNRLRVA 225
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQE
Sbjct: 226 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 285
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 286 RITSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 345
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP IVGEEHY VA V+ LQ+YKEL+D
Sbjct: 346 SRQLDPQIVGEEHYSVARAVQSTLQRYKELRD 377
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 138/327 (42%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G K T ++PVG LGRI++ G ID + ++ + AP +
Sbjct: 66 GLSRGMKVKNTGSQIQVPVGHGTLGRIMDVLGRPIDEAGPIEADEKRSIHQKAPTFEELS 125
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 126 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 185
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 186 ERTREGNDFYHEMKDSNVLDKVGMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 245
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + RL ER I +
Sbjct: 246 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKV 292
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 293 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQ 352
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
+ G Y + + ++ L +Y+EL
Sbjct: 353 IVGEEHYSVARA----VQSTLQRYKEL 375
>gi|261378159|ref|ZP_05982732.1| ATP synthase F1, beta subunit [Neisseria cinerea ATCC 14685]
gi|269145622|gb|EEZ72040.1| ATP synthase F1, beta subunit [Neisseria cinerea ATCC 14685]
Length = 465
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/365 (64%), Positives = 286/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + L N +VQQ +G+ +VRTIA G+++G+KR V +TG
Sbjct: 13 VVDVEFPRDAIPHVYDALKLDENGLTLEVQQLLGDGVVRTIAMGSSDGLKRGMSVSNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG P+D G I++ K IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQTAPKFDELSSATELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 151/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRIV+ G +D + + AP +
Sbjct: 60 GLKRGMSVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQTAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 SATELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|71066580|ref|YP_265307.1| ATP synthase F0F1 subunit alpha [Psychrobacter arcticus 273-4]
gi|115312268|sp|Q4FQ35.1|ATPA_PSYA2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|71039565|gb|AAZ19873.1| ATP synthase F1, alpha subunit [Psychrobacter arcticus 273-4]
Length = 514
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 235/405 (58%), Positives = 311/405 (76%), Gaps = 4/405 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D L +GQK +CT +I E+PVG ELLGR+V++ G ID K K + VEKI
Sbjct: 74 AVVLGDFLKLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDGKGPINAKMTDKVEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR+SV++P++TG KS+D+MIPIG+GQRELIIGDRQTGKT +AID II QK +
Sbjct: 134 APGVIDRQSVDQPVMTGYKSVDTMIPIGRGQRELIIGDRQTGKTAMAIDAIIAQKASGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ ++YT VV A+A++ AA QYI+PY+GCT+GEYFRD
Sbjct: 194 CVYVAIGQKRSTIANVVRKLEQTGALEYTTVVVASASEPAALQYIAPYSGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI++DDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++EK
Sbjct: 254 GEDALIVFDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNAAYVEKF 313
Query: 407 --KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVG 464
++ K G+LTA PIIET GDV++F+PTNVISITDGQIFL+++LFNS RPA+N G
Sbjct: 314 TNGEVVGK-TGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESSLFNSGIRPAVNAG 372
Query: 465 LSVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLM 524
+SVSRVGGAAQ KI+KKLSG IR LAQYREL +F++F+SDLD T+ QL +GE+++ LM
Sbjct: 373 ISVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFAQFASDLDDATREQLDHGERVTELM 432
Query: 525 KQKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
KQK ++ SI E ++ F +P+++I FE ++Y
Sbjct: 433 KQKQYQPMSISEQAAVIYASNEGFLADVPVEKIGSFEEAYLRYMH 477
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 151/320 (47%), Gaps = 27/320 (8%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + PVG LGR+++ LG+PID KG IN+K + + P ++ + + TG
Sbjct: 92 TGRILEVPVGPELLGRVVDALGNPIDGKGPINAKMTDKVEKIAPGVIDRQSVDQPVMTGY 151
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCS-VFIGVGERSREGNDF 729
K +D + P +G + + G GKT ++ I IA + G V++ +G++ +
Sbjct: 152 KSVDTMIPIGRGQRELIIGDRQTGKTAMAIDAI--IAQKASGIKCVYVAIGQKRSTIANV 209
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
+++++ L+ +++ +EP+ + +G ++ E FR+ G+D L+ D++ + +
Sbjct: 210 VRKLEQTGALEYTTVVVASASEPAALQYIAPYSGCTMGEYFRDRGEDALIVFDDLSKQAV 269
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST---------------KNGTITSVQ 834
A ++S +L R P Y + +L ER S K G++T++
Sbjct: 270 AYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNAAYVEKFTNGEVVGKTGSLTALP 329
Query: 835 AIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHY 894
I A D++ P+ + D I L + GI PA++ S S+ + G
Sbjct: 330 IIETQAGDVSAFVPTNVISITDGQIFLESSLFNSGIRPAVNAGISVSR-----VGGAAQT 384
Query: 895 KV----ANEVKFYLQKYKEL 910
K+ + ++ L +Y+EL
Sbjct: 385 KIIKKLSGGIRTALAQYREL 404
>gi|303256393|ref|ZP_07342407.1| ATP synthase F1, beta subunit [Burkholderiales bacterium 1_1_47]
gi|331001480|ref|ZP_08325098.1| ATP synthase F1, beta subunit [Parasutterella excrementihominis YIT
11859]
gi|302859884|gb|EFL82961.1| ATP synthase F1, beta subunit [Burkholderiales bacterium 1_1_47]
gi|329568209|gb|EGG50026.1| ATP synthase F1, beta subunit [Parasutterella excrementihominis YIT
11859]
Length = 467
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 232/332 (69%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G++ G++R V G I+ PVG TLGRI++VLG P+D GE
Sbjct: 48 EVQQQLGDGVVRTIAMGSSEGLQRGMAVKALGHGIMVPVGPKTLGRIMDVLGRPVDEAGE 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +K+ PIH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IGEEKRMPIHRAAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA + G SVF GVGER+REGNDFYHEM ES VLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKAYGGYSVFAGVGERTREGNDFYHEMGESKVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+LLFIDNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LTGLTMAEAFRDEGRDILLFIDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RIASTKVGSITSIQAVYVPADDLTDPSPATTFGHLDATVVLSRDIAALGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP+I+GEEHY V V+ LQ+YKEL+D
Sbjct: 348 SRQIDPHIIGEEHYSVTRRVQATLQRYKELRD 379
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 133/311 (42%), Gaps = 23/311 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG + LGRI++ G +D + + R + + AP + + L TGIK ID +
Sbjct: 84 VPVGPKTLGRIMDVLGRPVDEAGEIGEEKRMPIHRAAPKFDELSPSVDLLETGIKVIDLV 143
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K ++ +G++ + +++
Sbjct: 144 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAYGGYSVFAGVGERTREGNDFYHEMGES 203
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
+D +V + + TG T+ E FRD G+D L+ D++ + A ++S
Sbjct: 204 KVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEAFRDEGRDILLFIDNIYRFTLAGTEVSA 263
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P V Y L E K+ +++I + G++T+ + D+
Sbjct: 264 LLGR------MPSAVGY-QPTLAEEMGKL------QERIASTKVGSITSIQAVYVPADDL 310
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P D + L ++ PA++ S SR + G Y + ++
Sbjct: 311 TDPSPATTFGHLDATVVLSRDIAALGIYPAVDPLDSTSRQIDPHIIGEEHYSVTRR---- 366
Query: 486 IRIMLAQYREL 496
++ L +Y+EL
Sbjct: 367 VQATLQRYKEL 377
>gi|241758951|ref|ZP_04757063.1| ATP synthase F1, beta subunit [Neisseria flavescens SK114]
gi|241320772|gb|EER57005.1| ATP synthase F1, beta subunit [Neisseria flavescens SK114]
Length = 465
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/365 (64%), Positives = 286/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + L N +VQQ +G+ +VRTIA G+++G+KR V +TG
Sbjct: 13 VVDVEFPRDAIPHVYDALKLDENGLTLEVQQLLGDGVVRTIAMGSSDGLKRGMSVSNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG P+D G I++ K IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQTAPKFDELSSTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 151/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRIV+ G +D + + AP +
Sbjct: 60 GLKRGMSVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQTAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 STTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|329118580|ref|ZP_08247284.1| ATP synthase F1 sector beta subunit [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465315|gb|EGF11596.1| ATP synthase F1 sector beta subunit [Neisseria bacilliformis ATCC
BAA-1200]
Length = 465
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/338 (68%), Positives = 278/338 (82%), Gaps = 6/338 (1%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQ +G+ +VRTIA G+++G+KR V +TG PI PVG TLGRI++VLG P+D G
Sbjct: 40 EVQQLLGDGVVRTIAMGSSDGLKRGMAVNNTGAPITVPVGKETLGRIMDVLGKPVDEAGA 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
++SK IH PKF +LETGIKVIDLLCPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 VDSKHTRSIHQEAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFYHEMK+SNVLDKV+++YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
LTGL++AE FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 220 LTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 279
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG+LQERI+ST+ G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+
Sbjct: 280 MGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAV 339
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP ++G+EHY VA V+ LQKYKEL+D
Sbjct: 340 DPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRD 377
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 151/368 (41%), Gaps = 31/368 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG E LGRI++ G+ +D K+ ++ + AP +
Sbjct: 60 GLKRGMAVNNTGAPITVPVGKETLGRIMDVLGKPVDEAGAVDSKHTRSIHQEAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 STTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKIS 521
R V G Y + + ++ L +Y+EL +L K + KI
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDIIAILGMDELSAEDKLTVMRARKIQ 402
Query: 522 LLMKQKPH 529
+ Q H
Sbjct: 403 RFLSQPFH 410
>gi|345875721|ref|ZP_08827511.1| ATP synthase F1, beta subunit [Neisseria weaveri LMG 5135]
gi|417957106|ref|ZP_12600034.1| ATP synthase F1, beta subunit [Neisseria weaveri ATCC 51223]
gi|343968620|gb|EGV36846.1| ATP synthase F1, beta subunit [Neisseria weaveri LMG 5135]
gi|343969110|gb|EGV37329.1| ATP synthase F1, beta subunit [Neisseria weaveri ATCC 51223]
Length = 465
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/365 (64%), Positives = 288/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + L +N +VQQ +G+ +VRTIA G+++G+KR V +TG
Sbjct: 13 VVDVEFPRDAIPHVYDALKLVDNDLTLEVQQLLGDGVVRTIAMGSSDGLKRGMAVNNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG+P+D G + S++ IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKATLGRIMDVLGNPVDEAGPVVSEETRAIHQAAPKFDELSSATELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 153/363 (42%), Gaps = 35/363 (9%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G T +PVG LGRI++ G +D + + + + AP + S
Sbjct: 61 LKRGMAVNNTGAPITVPVGKATLGRIMDVLGNPVDEAGPVVSEETRAIHQAAPKFDELSS 120
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G+
Sbjct: 121 ATELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGE 180
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQ 349
+ + +++K N +D +V + + TG T+ EYFRD G+
Sbjct: 181 RTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGR 240
Query: 350 DCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKI 409
D L D++ ++ A ++S LL R P + + RL ER I
Sbjct: 241 DVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------I 287
Query: 410 FNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 288 TSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSR 347
Query: 470 -----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLM 524
V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 348 QLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVMR 397
Query: 525 KQK 527
+K
Sbjct: 398 ARK 400
>gi|149188271|ref|ZP_01866565.1| F0F1 ATP synthase subunit beta [Vibrio shilonii AK1]
gi|148837860|gb|EDL54803.1| F0F1 ATP synthase subunit beta [Vibrio shilonii AK1]
Length = 461
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/345 (67%), Positives = 283/345 (82%)
Query: 568 FRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRI 627
+++ +N+ + +VQQQ+G +VR IA G+++G++R V TG PI PVG+ TLGRI
Sbjct: 30 LKVVGDENSSLVLEVQQQLGGGVVRCIAMGSSDGLRRGLQVETTGSPITVPVGEETLGRI 89
Query: 628 LNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGL 687
+NVLG PID G I + IH P + +Q + +LETG+KVIDL+CPF KGGKIGL
Sbjct: 90 MNVLGQPIDECGPIGEQASYEIHRPAPSYEDQSNSTELLETGVKVIDLICPFAKGGKIGL 149
Query: 688 FGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYG 747
FGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFY+EMKE+ VLDKV+++YG
Sbjct: 150 FGGAGVGKTVNMMELINNIAKAHSGLSVFTGVGERTREGNDFYYEMKEAGVLDKVAMVYG 209
Query: 748 QMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY 807
QMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGY
Sbjct: 210 QMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGY 269
Query: 808 QPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAE 867
QPTLAEEMG LQERI+STKNG+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA
Sbjct: 270 QPTLAEEMGVLQERITSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAA 329
Query: 868 LGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LG+YPAIDPL+S S+QLDP I+G+EHY A V+ LQ+YKELKD
Sbjct: 330 LGLYPAIDPLDSTSRQLDPQIIGQEHYDTAQAVQKTLQRYKELKD 374
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG E LGRI+N G+ ID + + + AP D+
Sbjct: 63 GLRRGLQVETTGSPITVPVGEETLGRIMNVLGQPIDECGPIGEQASYEIHRPAPSYEDQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TG+K ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 123 NSTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + TG T+ E FRD G+D L+
Sbjct: 183 ERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I + N
Sbjct: 243 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKN 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ PAI+ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPQ 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y + ++ L +Y+EL+
Sbjct: 350 IIGQEHYDTAQA----VQKTLQRYKELK 373
>gi|389809210|ref|ZP_10205192.1| F0F1 ATP synthase subunit beta [Rhodanobacter thiooxydans LCS2]
gi|388442053|gb|EIL98276.1| F0F1 ATP synthase subunit beta [Rhodanobacter thiooxydans LCS2]
Length = 470
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/338 (69%), Positives = 281/338 (83%), Gaps = 6/338 (1%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQ +G+ IVRTIA G+T G+KR +TG+ I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQVLGDGIVRTIALGSTEGLKRGLAARNTGEGIKVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + + IH P +++Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEQDRWVIHREAPSYADQAAANDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFYHEMK+SNVLDKV+++YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKAHAGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
LTGL++AE FR+ GKDVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 220 LTGLTMAEYFRDEKDETGKGKDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 279
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+
Sbjct: 280 MGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAV 339
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP ++G+EHY VA +V+ LQ+YKELKD
Sbjct: 340 DPLDSTSRQLDPNVIGQEHYDVARKVQGTLQRYKELKD 377
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 149/337 (44%), Gaps = 29/337 (8%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T + ++PVG LGRI++ G ID ++R + + AP D+
Sbjct: 59 EGLKRGLAARNTGEGIKVPVGKATLGRIMDVLGNPIDEAGPIGEQDRWVIHREAPSYADQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ N+ L TGIK ID + P KG + + G GKT ++ I N K + ++ +
Sbjct: 119 AAANDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHAGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------L 347
G++ + +++K N +D +V + + TG T+ EYFRD
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDETGK 238
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D L+ D++ ++ A ++S LL R P V Y L E + ++
Sbjct: 239 GKDVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QE 285
Query: 408 KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSV 467
+I + G++T+ + D+T P + D + L N+ + PA++ S
Sbjct: 286 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDST 345
Query: 468 SR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESF 499
SR V G Y + +K+ G L +Y+EL+
Sbjct: 346 SRQLDPNVIGQEHYDVARKVQG----TLQRYKELKDI 378
>gi|78064765|ref|YP_367534.1| ATP synthase F0F1 subunit beta [Burkholderia sp. 383]
gi|118573515|sp|Q39KX6.1|ATPB_BURS3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|77965510|gb|ABB06890.1| ATP synthase F1 subcomplex beta subunit [Burkholderia sp. 383]
Length = 464
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 275/332 (82%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R V +T KPI PVG TLGRI++VLG PID G
Sbjct: 45 EVQQQLGDGVVRTICLGASDGLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGP 104
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S+ IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 105 IESETTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 164
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 165 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 224
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 225 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 284
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 285 RITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 344
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 345 SRQIDPNVIGEEHYSITRRVQQTLQRYKELRD 376
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 147/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID + ++ + AP +
Sbjct: 65 GLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGPIESETTRSIHQKAPAFDELS 124
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 125 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 184
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 185 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 244
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 245 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKK 291
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 292 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPN 351
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y I ++ ++ L +Y+EL +L K + KI + Q
Sbjct: 352 VIGEEHYSITRR----VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQP 407
Query: 528 PH 529
H
Sbjct: 408 FH 409
>gi|388256222|ref|ZP_10133403.1| ATP synthase F1, alpha subunit [Cellvibrio sp. BR]
gi|387939922|gb|EIK46472.1| ATP synthase F1, alpha subunit [Cellvibrio sp. BR]
Length = 514
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 231/402 (57%), Positives = 308/402 (76%), Gaps = 2/402 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D + + +GQKC CT +I E+PVG ELLGR+V++ G ID K K + VEKI
Sbjct: 74 AVILGDYRGVAEGQKCKCTGRILEVPVGPELLGRVVDALGNPIDGKGPLNTKMTDAVEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ G+K+ID+M+PIG+GQRELIIGDRQ GKT IA+D IINQK +
Sbjct: 134 APGVIWRKSVDQPVQIGLKAIDAMVPIGRGQRELIIGDRQIGKTAIAVDAIINQKGSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ +V+ KL+ MD+T+V+AATA+D A+ Q+++ + GCT+GEYFRD
Sbjct: 194 CIYVAIGQKASSVASVVRKLEENGAMDHTIVIAATASDPASMQFLAAFAGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LIIYDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++++ ++EK
Sbjct: 254 GQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVSEAYVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA PIIET GDV++F+PTNVISITDGQIFL++++FNS RPA+N G+
Sbjct: 314 TKGEVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESSMFNSGIRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K+VKKLSG IR LAQYREL +FS+F+SDLD TK+QL +G++++ LMK
Sbjct: 374 SVSRVGGAAQTKVVKKLSGGIRTALAQYRELAAFSQFASDLDEATKSQLEHGQRVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKY 567
QK S+ ++ ++L I + ++ FE ++ +
Sbjct: 434 QKQFAPMSVGQMALVLYAANEGHLKDIDVSKVLDFEAALLSF 475
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 156/342 (45%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ G+ TG+ + PVG LGR+++ LG+PID KG +N+K +
Sbjct: 72 VGAVILGDYRGVAEGQKCKCTGRILEVPVGPELLGRVVDALGNPIDGKGPLNTKMTDAVE 131
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++ G+K ID + P +G + + G +GKT ++ I I
Sbjct: 132 KIAPGVIWRKSVDQPVQIGLKAIDAMVPIGRGQRELIIGDRQIGKTAIAVDAI----INQ 187
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG + ++ +G+++ +++E+ +D +I ++P+ + A G ++
Sbjct: 188 KGSGIKCIYVAIGQKASSVASVVRKLEENGAMDHTIVIAATASDPASMQFLAAFAGCTMG 247
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERIS---- 823
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER S
Sbjct: 248 EYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVSE 307
Query: 824 -----------STKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
+ K G++T++ I A D++ P+ + D I L + GI P
Sbjct: 308 AYVEKFTKGEVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESSMFNSGIRP 367
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
A++ S S+ + G KV + ++ L +Y+EL
Sbjct: 368 AMNAGISVSR-----VGGAAQTKVVKKLSGGIRTALAQYREL 404
>gi|254250972|ref|ZP_04944290.1| Vacuolar ATP synthase catalytic subunit [Burkholderia dolosa
AUO158]
gi|124893581|gb|EAY67461.1| Vacuolar ATP synthase catalytic subunit [Burkholderia dolosa
AUO158]
Length = 464
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 276/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R V +TG PI PVG TLGRI++VLG PID G
Sbjct: 45 EVQQQLGDGVVRTICLGASDGLRRGLTVKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGP 104
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S+ K IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 105 IESETKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 164
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 165 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 224
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 225 LTGLTMAEFFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 284
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 285 RITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 344
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 345 SRQIDPNVIGEEHYSITRRVQQTLQRYKELRD 376
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 143/346 (41%), Gaps = 25/346 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + + ++ + AP + E L TGIK ID +
Sbjct: 81 VPVGKPTLGRIMDVLGRPIDEAGPIESETKRSIHQKAPAFDELSPSTELLETGIKVIDLI 140
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K ++ +G++ + +++K
Sbjct: 141 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 200
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
N +D +V + + TG T+ E+FRD G D L D++ + A ++S
Sbjct: 201 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGLDVLFFVDNIYRFTLAGTEVSA 260
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P V Y L E K+ +++I + G++T+ + D+
Sbjct: 261 LLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKKGSITSVQAVYVPADDL 307
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P D + L ++ + PA++ S SR V G Y I ++
Sbjct: 308 TDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRR---- 363
Query: 486 IRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
++ L +Y+EL +L K + KI + Q H
Sbjct: 364 VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQPFH 409
>gi|343517086|ref|ZP_08754101.1| F0F1 ATP synthase subunit beta [Vibrio sp. N418]
gi|342794585|gb|EGU30348.1| F0F1 ATP synthase subunit beta [Vibrio sp. N418]
Length = 461
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 235/345 (68%), Positives = 285/345 (82%)
Query: 568 FRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRI 627
R+++ + + + +VQQQ+G IVR I G+++G++R V TG+PI PVG+ TLGRI
Sbjct: 30 LRLVDEEFSSLVLEVQQQLGGGIVRCIVMGSSDGLRRGLAVRATGEPITVPVGEETLGRI 89
Query: 628 LNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGL 687
+NVLG+PID G I K IH P + Q + ++LETG+KVIDL+CPF KGGKIGL
Sbjct: 90 MNVLGEPIDECGPIGEKLSYGIHRPAPSYEEQANSTDLLETGVKVIDLVCPFAKGGKIGL 149
Query: 688 FGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYG 747
FGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFY EMKE+ VLDKV+++YG
Sbjct: 150 FGGAGVGKTVNMMELINNIAKAHSGLSVFTGVGERTREGNDFYFEMKEAGVLDKVAMVYG 209
Query: 748 QMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY 807
QMNEP GNRLRVALTGL++AE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGY
Sbjct: 210 QMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY 269
Query: 808 QPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAE 867
QPTLAEEMG LQERI+ST++G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA
Sbjct: 270 QPTLAEEMGVLQERITSTRSGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAA 329
Query: 868 LGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LG+YPAIDPL+S S+QLDP IVG+EHY+VA V+ LQ+YKELKD
Sbjct: 330 LGLYPAIDPLDSTSRQLDPLIVGQEHYEVAQNVQMTLQRYKELKD 374
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 145/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T + +PVG E LGRI+N GE ID K + + AP ++
Sbjct: 63 GLRRGLAVRATGEPITVPVGEETLGRIMNVLGEPIDECGPIGEKLSYGIHRPAPSYEEQA 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ + L TG+K ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 123 NSTDLLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + TG T+ E FRD G+D L+
Sbjct: 183 ERTREGNDFYFEMKEAGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I + +
Sbjct: 243 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTRS 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ PAI+ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPL 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y++ + ++++ L +Y+EL+
Sbjct: 350 IVGQEHYEVAQ----NVQMTLQRYKELK 373
>gi|343509649|ref|ZP_08746914.1| F0F1 ATP synthase subunit beta [Vibrio scophthalmi LMG 19158]
gi|342804000|gb|EGU39339.1| F0F1 ATP synthase subunit beta [Vibrio scophthalmi LMG 19158]
Length = 461
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 235/345 (68%), Positives = 285/345 (82%)
Query: 568 FRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRI 627
R+++ + + + +VQQQ+G IVR I G+++G++R V TG+PI PVG+ TLGRI
Sbjct: 30 LRLVDEEFSSLVLEVQQQLGGGIVRCIVMGSSDGLRRGLAVRATGEPITVPVGEETLGRI 89
Query: 628 LNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGL 687
+NVLG+PID G I K IH P + Q + ++LETG+KVIDL+CPF KGGKIGL
Sbjct: 90 MNVLGEPIDECGPIGEKLSYGIHRPAPSYEEQANSTDLLETGVKVIDLVCPFAKGGKIGL 149
Query: 688 FGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYG 747
FGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFY EMKE+ VLDKV+++YG
Sbjct: 150 FGGAGVGKTVNMMELINNIAKAHSGLSVFTGVGERTREGNDFYFEMKEAGVLDKVAMVYG 209
Query: 748 QMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY 807
QMNEP GNRLRVALTGL++AE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGY
Sbjct: 210 QMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY 269
Query: 808 QPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAE 867
QPTLAEEMG LQERI+ST++G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA
Sbjct: 270 QPTLAEEMGVLQERITSTRSGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAA 329
Query: 868 LGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LG+YPAIDPL+S S+QLDP IVG+EHY+VA V+ LQ+YKELKD
Sbjct: 330 LGLYPAIDPLDSTSRQLDPLIVGQEHYEVAQNVQMTLQRYKELKD 374
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 145/328 (44%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T + +PVG E LGRI+N GE ID K + + AP ++
Sbjct: 63 GLRRGLAVRATGEPITVPVGEETLGRIMNVLGEPIDECGPIGEKLSYGIHRPAPSYEEQA 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ + L TG+K ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 123 NSTDLLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + TG T+ E FRD G+D L+
Sbjct: 183 ERTREGNDFYFEMKEAGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I + +
Sbjct: 243 IDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTRS 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ PAI+ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPL 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ G Y++ + ++++ L +Y+EL+
Sbjct: 350 IVGQEHYEVAQ----NVQMTLQRYKELK 373
>gi|172059172|ref|YP_001806824.1| F0F1 ATP synthase subunit beta [Burkholderia ambifaria MC40-6]
gi|226739982|sp|B1YQL4.1|ATPB_BURA4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|171991689|gb|ACB62608.1| ATP synthase F1, beta subunit [Burkholderia ambifaria MC40-6]
Length = 464
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 275/332 (82%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R V +T KPI PVG TLGRI++VLG PID G
Sbjct: 45 EVQQQLGDGVVRTICLGASDGLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGP 104
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S+ IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 105 IESEHTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 164
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 165 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 224
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 225 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 284
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 285 RITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 344
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 345 SRQIDPNVIGEEHYSITRRVQQTLQRYKELRD 376
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 148/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID ++ ++ + AP +
Sbjct: 65 GLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGPIESEHTRSIHQKAPAFDELS 124
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 125 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 184
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 185 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 244
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 245 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKK 291
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 292 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPN 351
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y I ++ ++ L +Y+EL +L K + KI + Q
Sbjct: 352 VIGEEHYSITRR----VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQP 407
Query: 528 PH 529
H
Sbjct: 408 FH 409
>gi|167564618|ref|ZP_02357534.1| F0F1 ATP synthase subunit beta [Burkholderia oklahomensis EO147]
gi|167571760|ref|ZP_02364634.1| F0F1 ATP synthase subunit beta [Burkholderia oklahomensis C6786]
Length = 459
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 276/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R +V +T KPI PVG TLGRI++VLG PID G
Sbjct: 40 EVQQQLGDGVVRTICLGASDGLRRGLVVKNTNKPISVPVGKPTLGRIMDVLGRPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S+ IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IESEHTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 220 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 340 SRQIDPNVIGEEHYSITRRVQQTLQRYKELRD 371
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 145/352 (41%), Gaps = 25/352 (7%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T K +PVG LGRI++ G ID ++ ++ + AP + E L TGI
Sbjct: 70 TNKPISVPVGKPTLGRIMDVLGRPIDEAGPIESEHTRSIHQKAPAFDELSPSTELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID + P KG + + G GKT ++ I N K ++ +G++ +
Sbjct: 130 KVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWA 364
+++K N +D +V + + TG T+ E+FRD G D L D++ + A
Sbjct: 190 HEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLA 249
Query: 365 YRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIE 424
++S LL R P V Y L E K+ +++I + G++T+ +
Sbjct: 250 GTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKTGSITSVQAVY 296
Query: 425 TLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIV 479
D+T P D + L ++ + PA++ S SR V G Y I
Sbjct: 297 VPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSIT 356
Query: 480 KKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
++ ++ L +Y+EL +L K + KI + Q H
Sbjct: 357 RR----VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQPFH 404
>gi|402564911|ref|YP_006614256.1| F0F1 ATP synthase subunit beta [Burkholderia cepacia GG4]
gi|402246108|gb|AFQ46562.1| F0F1 ATP synthase subunit beta [Burkholderia cepacia GG4]
Length = 464
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 275/332 (82%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R V +T KPI PVG TLGRI++VLG PID G
Sbjct: 45 EVQQQLGDGVVRTICLGASDGLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGP 104
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S+ IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 105 IESEHTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 164
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 165 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 224
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 225 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 284
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 285 RITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 344
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 345 SRQIDPNVIGEEHYSITRRVQQTLQRYKELRD 376
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 148/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID ++ ++ + AP +
Sbjct: 65 GLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGPIESEHTRSIHQKAPAFDELS 124
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 125 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 184
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 185 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 244
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 245 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKK 291
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 292 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPN 351
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y I ++ ++ L +Y+EL +L K + KI + Q
Sbjct: 352 VIGEEHYSITRR----VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQP 407
Query: 528 PH 529
H
Sbjct: 408 FH 409
>gi|374428667|dbj|BAL49711.1| F-type ATP synthase beta subunit [Hydrogenophilus thermoluteolus]
Length = 467
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/334 (70%), Positives = 279/334 (83%), Gaps = 2/334 (0%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G ++G++R V TG PI PVG TLGRI++VLG PID G
Sbjct: 46 EVQQQLGDGVVRTIALGASDGLRRGMKVESTGAPISVPVGHGTLGRIMDVLGRPIDEAGP 105
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + + IH PKF + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 106 IQTDEYRSIHQKAPKFDELSPSVELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 165
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMKESNVLDKV++++GQMNEP GNRLRVA
Sbjct: 166 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKESNVLDKVAMVFGQMNEPPGNRLRVA 225
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 226 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 285
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI--DPLE 878
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+ DPL+
Sbjct: 286 RITSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPDPLD 345
Query: 879 SYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S S+QLDP IVGEEHY VA +V+ LQ+YKEL+D
Sbjct: 346 STSRQLDPLIVGEEHYTVARKVQATLQRYKELRD 379
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 139/329 (42%), Gaps = 25/329 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T +PVG LGRI++ G ID ++ + AP +
Sbjct: 66 GLRRGMKVESTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIQTDEYRSIHQKAPKFDELS 125
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 126 PSVELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVG 185
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 186 ERTREGNDFYHEMKESNVLDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 245
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 246 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKV 292
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL--SVSR--- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 293 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPDPLDSTSRQLD 352
Query: 470 --VGGAAQYKIVKKLSGDIRIMLAQYREL 496
+ G Y + +K ++ L +Y+EL
Sbjct: 353 PLIVGEEHYTVARK----VQATLQRYKEL 377
>gi|294668638|ref|ZP_06733734.1| ATP synthase F1, beta subunit [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291309400|gb|EFE50643.1| ATP synthase F1, beta subunit [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 463
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/365 (64%), Positives = 286/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I F + L N +VQQ +G+ +VRTIA G+++G+KR V +TG
Sbjct: 13 VVDVEFPRDAIPHVFDALKLVENDLTLEVQQLLGDGVVRTIAMGSSDGLKRGMAVNNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG+P+D G +N+ IH PKF +LETGIKVI
Sbjct: 73 PITVPVGRETLGRIMDVLGNPVDEAGPVNASNTRAIHQEAPKFDELSSTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 153/363 (42%), Gaps = 35/363 (9%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G T +PVG E LGRI++ G +D N + + AP + S
Sbjct: 61 LKRGMAVNNTGAPITVPVGRETLGRIMDVLGNPVDEAGPVNASNTRAIHQEAPKFDELSS 120
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G+
Sbjct: 121 TTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGE 180
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQ 349
+ + +++K N +D +V + + TG T+ EYFRD G+
Sbjct: 181 RTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGR 240
Query: 350 DCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKI 409
D L D++ ++ A ++S LL R P + + RL ER I
Sbjct: 241 DVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------I 287
Query: 410 FNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
+ G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 288 TSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSR 347
Query: 470 -----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLM 524
V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 348 QLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVMR 397
Query: 525 KQK 527
+K
Sbjct: 398 ARK 400
>gi|161523286|ref|YP_001578298.1| F0F1 ATP synthase subunit beta [Burkholderia multivorans ATCC
17616]
gi|189351941|ref|YP_001947569.1| F0F1 ATP synthase subunit beta [Burkholderia multivorans ATCC
17616]
gi|221202177|ref|ZP_03575212.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD2M]
gi|221208762|ref|ZP_03581761.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD2]
gi|221214288|ref|ZP_03587260.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD1]
gi|421470093|ref|ZP_15918500.1| ATP synthase F1, beta subunit [Burkholderia multivorans ATCC
BAA-247]
gi|421477532|ref|ZP_15925352.1| ATP synthase F1, beta subunit [Burkholderia multivorans CF2]
gi|226740175|sp|A9AJG4.1|ATPB_BURM1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|160340715|gb|ABX13801.1| ATP synthase F1, beta subunit [Burkholderia multivorans ATCC 17616]
gi|189335963|dbj|BAG45033.1| F-type H+-transporting ATPase beta chain [Burkholderia multivorans
ATCC 17616]
gi|221165943|gb|EED98417.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD1]
gi|221171394|gb|EEE03842.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD2]
gi|221177971|gb|EEE10383.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD2M]
gi|400226387|gb|EJO56465.1| ATP synthase F1, beta subunit [Burkholderia multivorans CF2]
gi|400228511|gb|EJO58440.1| ATP synthase F1, beta subunit [Burkholderia multivorans ATCC
BAA-247]
Length = 464
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 276/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R V +TG PI PVG TLGRI++VLG PID G
Sbjct: 45 EVQQQLGDGVVRTICLGASDGLRRGLTVKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGP 104
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S+ K IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 105 IESETKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 164
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 165 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 224
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 225 LTGLTMAEFFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 284
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 285 RITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 344
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 345 SRQIDPNVIGEEHYSITRRVQQTLQRYKELRD 376
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 143/346 (41%), Gaps = 25/346 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + + ++ + AP + E L TGIK ID +
Sbjct: 81 VPVGKPTLGRIMDVLGRPIDEAGPIESETKRSIHQKAPAFDELSPSTELLETGIKVIDLI 140
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K ++ +G++ + +++K
Sbjct: 141 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 200
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
N +D +V + + TG T+ E+FRD G D L D++ + A ++S
Sbjct: 201 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGLDVLFFVDNIYRFTLAGTEVSA 260
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P V Y L E K+ +++I + G++T+ + D+
Sbjct: 261 LLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKKGSITSVQAVYVPADDL 307
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P D + L ++ + PA++ S SR V G Y I ++
Sbjct: 308 TDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRR---- 363
Query: 486 IRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
++ L +Y+EL +L K + KI + Q H
Sbjct: 364 VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQPFH 409
>gi|148361324|ref|YP_001252531.1| ATP synthase subnit alpha [Legionella pneumophila str. Corby]
gi|190358155|sp|A5III5.1|ATPA2_LEGPC RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
synthase F1 sector subunit alpha 2; AltName:
Full=F-ATPase subunit alpha 2
gi|148283097|gb|ABQ57185.1| F0F1-ATPase subunit alpha, ATP synthase alpha chain [Legionella
pneumophila str. Corby]
Length = 517
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 231/404 (57%), Positives = 305/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D L +GQK CT +I E+PVG LLGR+V++ G ID K +EK+
Sbjct: 77 AVILGDSSTLAEGQKGKCTGRILEVPVGKGLLGRVVDALGNPIDGKGPIESSGMSPIEKV 136
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+S+++P+ TG+K+ID+MIP+G+GQRELIIGDRQTGKT IAID IINQK V
Sbjct: 137 APGVVTRKSIDQPVQTGLKAIDAMIPVGRGQRELIIGDRQTGKTAIAIDAIINQKGTGVK 196
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK SS+ +++ KL+ + +++T+VV A A+DSAA QYI+PY GCT+GEYF +
Sbjct: 197 CVYVAIGQKASSVASIVRKLEEHGALEHTIVVVAGASDSAALQYIAPYAGCTMGEYFMER 256
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGD+FYLHSRLLER+++IN +EK
Sbjct: 257 GEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDIFYLHSRLLERAARINADEVEKL 316
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFLD +LFNS RPAIN GL
Sbjct: 317 TNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLDVDLFNSGVRPAINSGL 376
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G R+ LAQ+RELE+FS+F+SDLD T+ QL G++I+ LMK
Sbjct: 377 SVSRVGGAAQTKIMKKLGGGTRLALAQFRELEAFSQFASDLDDATRKQLERGQRITELMK 436
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK + ++ E+ + L +++ + +P+ +I FE ++ Y R
Sbjct: 437 QKQYSPLTVAEMGVSLFVVEKGYLDDVPVNEISSFEASLHDYMR 480
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 146/323 (45%), Gaps = 31/323 (9%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + PVG LGR+++ LG+PID KG I S SPI + P + + ++TG+
Sbjct: 95 TGRILEVPVGKGLLGRVVDALGNPIDGKGPIESSGMSPIEKVAPGVVTRKSIDQPVQTGL 154
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCS---VFIGVGERSREGN 727
K ID + P +G + + G GKT ++ I I KG V++ +G+++
Sbjct: 155 KAIDAMIPVGRGQRELIIGDRQTGKTAIAIDAI----INQKGTGVKCVYVAIGQKASSVA 210
Query: 728 DFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRF 787
+++E L+ ++ ++ + + G ++ E F G+D L+ D++ +
Sbjct: 211 SIVRKLEEHGALEHTIVVVAGASDSAALQYIAPYAGCTMGEYFMERGEDALIVYDDLTKQ 270
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTL---------------AEEMGKLQERISSTKNGTITS 832
A ++S +L R P Y + A+E+ KL K G++T+
Sbjct: 271 AWAYRQISLLLRRPPGREAYPGDIFYLHSRLLERAARINADEVEKLTNGEVKGKTGSLTA 330
Query: 833 VQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEE 892
+ I A D++ P+ + D I L + G+ PAI+ S S+ + G
Sbjct: 331 LPIIETQAGDVSAFVPTNVISITDGQIFLDVDLFNSGVRPAINSGLSVSR-----VGGAA 385
Query: 893 HYKVANEV----KFYLQKYKELK 911
K+ ++ + L +++EL+
Sbjct: 386 QTKIMKKLGGGTRLALAQFRELE 408
>gi|94312427|ref|YP_585637.1| F0F1 ATP synthase subunit alpha [Cupriavidus metallidurans CH34]
gi|118573485|sp|Q1LHK8.1|ATPA_RALME RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|93356279|gb|ABF10368.1| F1 sector of membrane-bound ATP synthase, alpha subunit
[Cupriavidus metallidurans CH34]
Length = 513
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 232/418 (55%), Positives = 314/418 (75%), Gaps = 4/418 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++++G CT +I E+PVG ELLGR+VN+ G+ ID K K + +EK+
Sbjct: 73 AVVLGEYEHISEGDTVKCTGRILEVPVGKELLGRVVNTLGQPIDGKGPINAKETDVIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KSID+M+PIG+GQRELIIGDRQTGKT +A+D+IINQK K V
Sbjct: 133 APGVIARQSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGKTAVAVDSIINQKGKGVF 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ + M+YT+VVAATA+DSAA QY++ Y GCT+GEYFRD
Sbjct: 193 CVYVAIGQKASTISNVVRKLEEHGAMEYTIVVAATASDSAAMQYLAAYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER++++N+ ++ K
Sbjct: 253 GEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNEDYVAKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA P+IET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TNGAVTGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKLSG IR LAQYREL +F++F+SDLD T+ QL G +++ L+K
Sbjct: 373 SVSRVGGAAQTKVIKKLSGGIRTDLAQYRELAAFAQFASDLDDATRKQLERGRRVTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF--RIINLKNNISINK 581
Q ++ + +L L N F + +K I FE + + + +L N I K
Sbjct: 433 QPQYQPLQVWQLAASLYAANNGFLDNVDVKDILPFEKGLHDHLKTKFADLVNRIEDTK 490
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 155/342 (45%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I V TG+ + PVG LGR++N LG PID KG IN+K+ I
Sbjct: 71 VGAVVLGEYEHISEGDTVKCTGRILEVPVGKELLGRVVNTLGQPIDGKGPINAKETDVIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GKT ++ I I
Sbjct: 131 KVAPGVIARQSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGKTAVAVDSI----INQ 186
Query: 711 KGCSVF---IGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG VF + +G+++ ++ +++E ++ ++ ++ + + A G ++
Sbjct: 187 KGKGVFCVYVAIGQKASTISNVVRKLEEHGAMEYTIVVAATASDSAAMQYLAAYAGCTMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERIS---- 823
E FR+ G+D L+ D++ + A +VS +L R P Y + +L ER +
Sbjct: 247 EYFRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNE 306
Query: 824 -----------STKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
+ K G++T++ I A D++ P+ + D I L + GI P
Sbjct: 307 DYVAKFTNGAVTGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
AI+ S S+ + G KV + ++ L +Y+EL
Sbjct: 367 AINAGISVSR-----VGGAAQTKVIKKLSGGIRTDLAQYREL 403
>gi|134294238|ref|YP_001117973.1| F0F1 ATP synthase subunit beta [Burkholderia vietnamiensis G4]
gi|387900864|ref|YP_006331203.1| ATP synthase subunit beta [Burkholderia sp. KJ006]
gi|166201695|sp|A4JA35.1|ATPB_BURVG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|134137395|gb|ABO53138.1| ATP synthase F1 subcomplex beta subunit [Burkholderia vietnamiensis
G4]
gi|387575756|gb|AFJ84472.1| ATP synthase beta chain [Burkholderia sp. KJ006]
Length = 464
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 275/332 (82%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R V +T KPI PVG TLGRI++VLG PID G
Sbjct: 45 EVQQQLGDGVVRTICLGASDGLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGP 104
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S+ IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 105 IESEHTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 164
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 165 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 224
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 225 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 284
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 285 RITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 344
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 345 SRQIDPNVIGEEHYTITRRVQQTLQRYKELRD 376
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 148/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID ++ ++ + AP +
Sbjct: 65 GLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGPIESEHTRSIHQKAPAFDELS 124
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 125 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 184
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 185 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 244
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 245 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKK 291
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 292 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPN 351
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y I ++ ++ L +Y+EL +L K + KI + Q
Sbjct: 352 VIGEEHYTITRR----VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQP 407
Query: 528 PH 529
H
Sbjct: 408 FH 409
>gi|84622325|ref|YP_449697.1| F0F1 ATP synthase subunit beta [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|122879043|ref|YP_199371.6| ATP synthase F0F1 subunit beta [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|188578711|ref|YP_001915640.1| F0F1 ATP synthase subunit beta [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|118573780|sp|Q2P7Q4.1|ATPB_XANOM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|118573781|sp|Q5H4Y4.2|ATPB_XANOR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226740691|sp|B2SQB0.1|ATPB_XANOP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|84366265|dbj|BAE67423.1| ATP synthase beta chain [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188523163|gb|ACD61108.1| ATP synthase F1, beta subunit [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 468
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/362 (64%), Positives = 286/362 (79%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + + ++ +VQQQ+G+ +VRTIA G+T+G+KRN + +T + I
Sbjct: 16 VEFPRNEVPKVYHALKVEGTEITLEVQQQLGDGVVRTIALGSTDGLKRNLLATNTERAIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G++ + IH P + +Q + +LETGIKVIDL+
Sbjct: 76 VPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRGAPSYEDQSSSTELLETGIKVIDLM 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
NVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLF+DNIYR+TLA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDANGKGKDVLLFVDNIYRYTLA 255
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+T
Sbjct: 256 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPAT 315
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLDST+ LSR IA LGIYPA+DPL+S S+Q+DP ++G EHY A V+ LQKYKEL
Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375
Query: 911 KD 912
KD
Sbjct: 376 KD 377
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 140/324 (43%), Gaps = 29/324 (8%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
TE+ +PVG LGRI++ G ID + + + AP D+ S E L TGI
Sbjct: 70 TERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRGAPSYEDQSSSTELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 130 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDL 358
+++K N +D +V + + TG T+ EYFRD G+D L+ D++
Sbjct: 190 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDANGKGKDVLLFVDNI 249
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P + + L ER I + +G++T
Sbjct: 250 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQER-------------ITSTKSGSIT 296
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L N+ + PA++ S SR V G
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGH 356
Query: 474 AQYKIVKKLSGDIRIMLAQYRELE 497
Y ++ ++ L +Y+EL+
Sbjct: 357 EHYDTAQR----VQQTLQKYKELK 376
>gi|34500012|gb|AAQ73588.1| ATP synthase beta subunit [Pasteurella bettyae]
Length = 444
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/356 (66%), Positives = 289/356 (81%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + ++ +++ +VQQQ+G +VR IA G ++G+KR V +TGK I
Sbjct: 16 VEFPQDAVPKVYDALKVETGLTL-EVQQQLGGGVVRCIAMGTSDGLKRGLSVSNTGKAIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+P+D +G I ++++ IH P + Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPVDERGPIGAEEEWAIHRAAPSYEEQSNSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELIRNIA EH G SVF GVGER+REGNDFYHEM +S
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHNGYSVFAGVGERTREGNDFYHEMTDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP +VG VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGXXXLNVARGVQGILQRYKELKD 370
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG + LGRI+N GE +D + + + + AP ++
Sbjct: 59 GLKRGLSVSNTGKAISVPVGTKTLGRIMNVLGEPVDERGPIGAEEEWAIHRAAPSYEEQS 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N N ++ +G
Sbjct: 119 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHNGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ + PA++ S SR
Sbjct: 286 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPL 345
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G + + + G +L +Y+EL+
Sbjct: 346 VVGXXXLNVARGVQG----ILQRYKELK 369
>gi|58424949|gb|AAW73986.1| ATP synthase beta chain [Xanthomonas oryzae pv. oryzae KACC 10331]
Length = 512
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/362 (64%), Positives = 286/362 (79%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + + ++ +VQQQ+G+ +VRTIA G+T+G+KRN + +T + I
Sbjct: 60 VEFPRNEVPKVYHALKVEGTEITLEVQQQLGDGVVRTIALGSTDGLKRNLLATNTERAIS 119
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G++ + IH P + +Q + +LETGIKVIDL+
Sbjct: 120 VPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRGAPSYEDQSSSTELLETGIKVIDLM 179
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 180 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 239
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
NVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLF+DNIYR+TLA
Sbjct: 240 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDANGKGKDVLLFVDNIYRYTLA 299
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+T
Sbjct: 300 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPAT 359
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLDST+ LSR IA LGIYPA+DPL+S S+Q+DP ++G EHY A V+ LQKYKEL
Sbjct: 360 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 419
Query: 911 KD 912
KD
Sbjct: 420 KD 421
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 144/324 (44%), Gaps = 29/324 (8%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
TE+ +PVG LGRI++ G ID + + + AP D+ S E L TGI
Sbjct: 114 TERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRGAPSYEDQSSSTELLETGI 173
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 174 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFY 233
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDL 358
+++K N +D +V + + TG T+ EYFRD G+D L+ D++
Sbjct: 234 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDANGKGKDVLLFVDNI 293
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P V Y + + + + +++I + +G++T
Sbjct: 294 YRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKSGSIT 340
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L N+ + PA++ S SR V G
Sbjct: 341 SIQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGH 400
Query: 474 AQYKIVKKLSGDIRIMLAQYRELE 497
Y ++ ++ L +Y+EL+
Sbjct: 401 EHYDTAQR----VQQTLQKYKELK 420
>gi|218767495|ref|YP_002342007.1| F0F1 ATP synthase subunit beta [Neisseria meningitidis Z2491]
gi|433480692|ref|ZP_20437971.1| ATP synthase F1, beta subunit [Neisseria meningitidis 63041]
gi|433514244|ref|ZP_20471027.1| ATP synthase F1, beta subunit [Neisseria meningitidis 63049]
gi|433520611|ref|ZP_20477321.1| ATP synthase F1, beta subunit [Neisseria meningitidis 65014]
gi|433541797|ref|ZP_20498238.1| ATP synthase F1, beta subunit [Neisseria meningitidis 63006]
gi|81857515|sp|Q9JW70.1|ATPB_NEIMA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|121051503|emb|CAM07796.1| ATP synthase beta chain [Neisseria meningitidis Z2491]
gi|432213415|gb|ELK69333.1| ATP synthase F1, beta subunit [Neisseria meningitidis 63041]
gi|432245732|gb|ELL01197.1| ATP synthase F1, beta subunit [Neisseria meningitidis 63049]
gi|432251802|gb|ELL07164.1| ATP synthase F1, beta subunit [Neisseria meningitidis 65014]
gi|432275645|gb|ELL30715.1| ATP synthase F1, beta subunit [Neisseria meningitidis 63006]
Length = 465
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/365 (64%), Positives = 286/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + + L N +VQQ +G+ +VRTIA G+++G+KR V +TG
Sbjct: 13 VVDVEFPRDMIPRVYDALKLDENGLTLEVQQLLGDGVVRTIAMGSSDGLKRGMTVSNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG P+D G I++ K IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQAAPKFDELSSTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGCLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 152/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRIV+ G +D + + AP +
Sbjct: 60 GLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQAAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 STTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + L E + +++
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGCL------QER 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|170699472|ref|ZP_02890515.1| ATP synthase F1, alpha subunit [Burkholderia ambifaria IOP40-10]
gi|170135621|gb|EDT03906.1| ATP synthase F1, alpha subunit [Burkholderia ambifaria IOP40-10]
Length = 513
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 235/407 (57%), Positives = 313/407 (76%), Gaps = 2/407 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++++G T +I E+PVG EL+GR+V++ G ID K K + +EKI
Sbjct: 73 AVILGEYEHISEGDVVKTTGRILEVPVGPELVGRVVDALGNPIDGKGPVNAKLTDAIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TGIKSID+M+PIG+GQRELIIGDRQ GKT +A+D IINQK K++I
Sbjct: 133 APGVIWRKSVSQPVQTGIKSIDAMVPIGRGQRELIIGDRQCGKTAVALDAIINQKGKDLI 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS++NV+ KL+ M+YT+VVAATA+DSAA QY++PY GCT+GEYFRD
Sbjct: 193 CIYVAIGQKASSIMNVVRKLEETGAMEYTIVVAATASDSAAMQYLAPYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LIIYDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++++ ++EK
Sbjct: 253 GQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVSEEYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
+G+LTA P+IET GDVT+F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFLETDLFNAGIRPAINAGV 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K+VKKLSG IR LAQYREL +F++F+SDLD T+ QL G +++ L+K
Sbjct: 373 SVSRVGGAAQTKVVKKLSGGIRTDLAQYRELAAFAQFASDLDEATRKQLERGRRVTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIIN 572
Q ++ + EL + L N + + +KQ+ FE + + + N
Sbjct: 433 QPQYQPLQVWELAVSLYAANNGYLDDLDVKQVLPFEKGLRESLKTSN 479
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 155/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I +V TG+ + PVG +GR+++ LG+PID KG +N+K I
Sbjct: 71 VGAVILGEYEHISEGDVVKTTGRILEVPVGPELVGRVVDALGNPIDGKGPVNAKLTDAIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TGIK ID + P +G + + G GKT ++ I N +
Sbjct: 131 KIAPGVIWRKSVSQPVQTGIKSIDAMVPIGRGQRELIIGDRQCGKTAVALDAIINQKGKD 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ + +++E+ ++ ++ ++ + + G ++ E F
Sbjct: 191 LIC-IYVAIGQKASSIMNVVRKLEETGAMEYTIVVAATASDSAAMQYLAPYAGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 250 RDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVSEEYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K+G++T++ I A D+T P+ + D I L + GI PAI+
Sbjct: 310 EKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFLETDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G KV + ++ L +Y+EL
Sbjct: 370 AGVSVSR-----VGGAAQTKVVKKLSGGIRTDLAQYREL 403
>gi|416932072|ref|ZP_11933604.1| F0F1 ATP synthase subunit beta [Burkholderia sp. TJI49]
gi|325525633|gb|EGD03407.1| F0F1 ATP synthase subunit beta [Burkholderia sp. TJI49]
Length = 459
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 276/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R V +TG PI PVG TLGRI++VLG PID G
Sbjct: 40 EVQQQLGDGVVRTICLGASDGLRRGLTVKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S+ K IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IESETKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 220 LTGLTMAEFFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 340 SRQIDPNVIGEEHYSITRRVQQTLQRYKELRD 371
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 143/346 (41%), Gaps = 25/346 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + + ++ + AP + E L TGIK ID +
Sbjct: 76 VPVGKPTLGRIMDVLGRPIDEAGPIESETKRSIHQKAPAFDELSPSTELLETGIKVIDLI 135
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K ++ +G++ + +++K
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 195
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
N +D +V + + TG T+ E+FRD G D L D++ + A ++S
Sbjct: 196 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGLDVLFFVDNIYRFTLAGTEVSA 255
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P V Y L E K+ +++I + G++T+ + D+
Sbjct: 256 LLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKKGSITSVQAVYVPADDL 302
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P D + L ++ + PA++ S SR V G Y I ++
Sbjct: 303 TDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRR---- 358
Query: 486 IRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
++ L +Y+EL +L K + KI + Q H
Sbjct: 359 VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQPFH 404
>gi|451936866|gb|AGF87178.1| F-type ATP synthase alpha subunit [uncultured organism]
gi|451936884|gb|AGF87195.1| F-type ATP synthase alpha subunit [uncultured organism]
Length = 512
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 229/402 (56%), Positives = 313/402 (77%), Gaps = 2/402 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++++G T +I E+PVG ELLGR+VN+ G+ ID K K + +EK+
Sbjct: 73 AVVLGDFEHISEGDTVKATGRILEVPVGPELLGRVVNALGQPIDGKGPIEAKLTDKIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+K++D+MIPIG+GQRELIIGDRQTGKT +A+DTIINQK +N+
Sbjct: 133 APGVIWRKSVSQPVQTGLKAVDTMIPIGRGQRELIIGDRQTGKTAVAVDTIINQKGQNMY 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S++ NV+ KL+ + M+YT VVA+ A++SAA QY++ Y GCT+GEYFRD
Sbjct: 193 CIYVAIGQKASTIANVVRKLEEHGAMEYTTVVASPASESAAMQYLAAYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G D LIIYDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N+ ++E
Sbjct: 253 GMDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEQYVENF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPA+N G+
Sbjct: 313 TKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAVNPGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKLSG IR LAQYREL +F++F+SDLD T+ QL G +++ L+K
Sbjct: 373 SVSRVGGAAQTKVIKKLSGGIRTDLAQYRELAAFAQFASDLDEATRKQLERGRRVTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKY 567
Q + +I ++ + LL + N FF +P++++ E ++ +Y
Sbjct: 433 QPQYSPMNIAQMAVSLLAVNNGFFDDVPVEKVLACEHDMHQY 474
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 154/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ I V TG+ + PVG LGR++N LG PID KG I +K I
Sbjct: 71 VGAVVLGDFEHISEGDTVKATGRILEVPVGPELLGRVVNALGQPIDGKGPIEAKLTDKIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K +D + P +G + + G GKT ++ I N ++
Sbjct: 131 KVAPGVIWRKSVSQPVQTGLKAVDTMIPIGRGQRELIIGDRQTGKTAVAVDTIINQKGQN 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ + +++E ++ +++ +E + + A G ++ E F
Sbjct: 191 MYC-IYVAIGQKASTIANVVRKLEEHGAMEYTTVVASPASESAAMQYLAAYAGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 250 RDRGMDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEQYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + GI PA++
Sbjct: 310 ENFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAVN 369
Query: 876 PLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
P S S+ + G KV + ++ L +Y+EL
Sbjct: 370 PGISVSR-----VGGAAQTKVIKKLSGGIRTDLAQYREL 403
>gi|333368565|ref|ZP_08460745.1| ATP synthase F1 sector beta subunit [Psychrobacter sp. 1501(2011)]
gi|332976825|gb|EGK13651.1| ATP synthase F1 sector beta subunit [Psychrobacter sp. 1501(2011)]
Length = 475
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 235/369 (63%), Positives = 291/369 (78%), Gaps = 13/369 (3%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ + + + + + +VQQQ+G+ +VRTIA G+T G+KR V +TG PI
Sbjct: 16 VEFTRTDVPQVYDALVVDGTDTTLEVQQQLGDGVVRTIAMGSTEGLKRGLPVTNTGAPIT 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVGD TLGRI++VLG PID +G +N++ IH P + Q + ++LETGIKVIDLL
Sbjct: 76 VPVGDSTLGRIMDVLGRPIDEQGPVNAEDHWSIHRQAPSYDEQANSTDLLETGIKVIDLL 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA++H G SVF GVGER+REGNDFYHEM+E+
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYHEMQEA 195
Query: 737 NVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDN 783
V+D KV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLF+DN
Sbjct: 196 GVVDVENFTNSKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGKDVLLFVDN 255
Query: 784 IYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDL 843
IYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+ST+ G+ITS+QA+YVPADDL
Sbjct: 256 IYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTQTGSITSIQAVYVPADDL 315
Query: 844 TDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFY 903
TDPSP+TTF HLD+T+VLSR IA GIYPAIDPL+S S+QLDP ++GE+HY VA V+
Sbjct: 316 TDPSPATTFAHLDATVVLSRDIASQGIYPAIDPLDSTSRQLDPLVIGEDHYNVARGVQEV 375
Query: 904 LQKYKELKD 912
LQ+YKELKD
Sbjct: 376 LQRYKELKD 384
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 156/376 (41%), Gaps = 38/376 (10%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G ID + ++ ++ + AP ++
Sbjct: 59 EGLKRGLPVTNTGAPITVPVGDSTLGRIMDVLGRPIDEQGPVNAEDHWSIHRQAPSYDEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ + L TGIK ID + P KG + + G GKT ++ I N K+ + ++ +
Sbjct: 119 ANSTDLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
G++ + ++++ +D +V + + TG T+ EYFRD
Sbjct: 179 GERTREGNDFYHEMQEAGVVDVENFTNSKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRD 238
Query: 347 L------GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKIN 400
G+D L+ D++ ++ A ++S LL R P + L E +
Sbjct: 239 QKDENGKGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL- 290
Query: 401 KYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPA 460
+++I + G++T+ + D+T P + D + L ++ + PA
Sbjct: 291 -----QERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPA 345
Query: 461 INVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQ 513
I+ S SR V G Y + + ++ +L +Y+EL+ +L K
Sbjct: 346 IDPLDSTSRQLDPLVIGEDHYNVARG----VQEVLQRYKELKDIIAILGMDELSEEDKMV 401
Query: 514 LYNGEKISLLMKQKPH 529
+Y KI + Q H
Sbjct: 402 VYRARKIQRFLSQPFH 417
>gi|289665457|ref|ZP_06487038.1| F0F1 ATP synthase subunit beta [Xanthomonas campestris pv.
vasculorum NCPPB 702]
gi|289668361|ref|ZP_06489436.1| F0F1 ATP synthase subunit beta [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 468
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/362 (64%), Positives = 286/362 (79%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + + ++ +VQQQ+G+ +VRTIA G+T+G+KRN + +T + I
Sbjct: 16 VEFPRNEVPKVYHALKVEGTEITLEVQQQLGDGVVRTIALGSTDGLKRNLLATNTERAIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G++ + IH P + +Q + +LETGIKVIDL+
Sbjct: 76 VPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRGAPSYEDQSSSTELLETGIKVIDLM 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
NVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLF+DNIYR+TLA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLA 255
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITS+QA+YVPADDLTDPSP+T
Sbjct: 256 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPAT 315
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLDST+ LSR IA LGIYPA+DPL+S S+Q+DP ++G EHY A V+ LQKYKEL
Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375
Query: 911 KD 912
KD
Sbjct: 376 KD 377
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 140/324 (43%), Gaps = 29/324 (8%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
TE+ +PVG LGRI++ G ID + + + AP D+ S E L TGI
Sbjct: 70 TERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRGAPSYEDQSSSTELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 130 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFY 189
Query: 305 NKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LGQDCLIIYDDL 358
+++K N +D +V + + TG T+ EYFRD G+D L+ D++
Sbjct: 190 HEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNI 249
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P + + L ER I + +G++T
Sbjct: 250 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQER-------------ITSTKSGSIT 296
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L N+ + PA++ S SR V G
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGH 356
Query: 474 AQYKIVKKLSGDIRIMLAQYRELE 497
Y ++ ++ L +Y+EL+
Sbjct: 357 EHYDTAQR----VQQTLQKYKELK 376
>gi|115350153|ref|YP_771992.1| F0F1 ATP synthase subunit beta [Burkholderia ambifaria AMMD]
gi|122324407|sp|Q0BJL5.1|ATPB_BURCM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|115280141|gb|ABI85658.1| ATP synthase F1 subcomplex beta subunit [Burkholderia ambifaria
AMMD]
Length = 464
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 275/332 (82%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R V +T KPI PVG TLGRI++VLG PID G
Sbjct: 45 EVQQQLGDGVVRTICLGASDGLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGP 104
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S+ IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 105 IESEVTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 164
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 165 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 224
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 225 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 284
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 285 RITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 344
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 345 SRQIDPNVIGEEHYSITRRVQQTLQRYKELRD 376
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 147/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID + ++ + AP +
Sbjct: 65 GLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGPIESEVTRSIHQKAPAFDELS 124
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 125 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 184
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 185 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 244
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 245 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKK 291
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 292 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPN 351
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y I ++ ++ L +Y+EL +L K + KI + Q
Sbjct: 352 VIGEEHYSITRR----VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQP 407
Query: 528 PH 529
H
Sbjct: 408 FH 409
>gi|206558440|ref|YP_002229200.1| F0F1 ATP synthase subunit beta [Burkholderia cenocepacia J2315]
gi|444357090|ref|ZP_21158672.1| ATP synthase F1, beta subunit [Burkholderia cenocepacia BC7]
gi|226740103|sp|B4EEY9.1|ATPB_BURCJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|198034477|emb|CAR50342.1| ATP synthase beta chain [Burkholderia cenocepacia J2315]
gi|443606648|gb|ELT74413.1| ATP synthase F1, beta subunit [Burkholderia cenocepacia BC7]
Length = 464
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 275/332 (82%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R V +T KPI PVG TLGRI++VLG PID G
Sbjct: 45 EVQQQLGDGVVRTICLGASDGLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGP 104
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+S IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 105 IDSDVTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 164
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 165 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 224
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 225 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 284
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 285 RITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 344
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 345 SRQIDPNVIGEEHYSITRRVQQTLQRYKELRD 376
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 146/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID ++ + AP +
Sbjct: 65 GLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGPIDSDVTRSIHQKAPAFDELS 124
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 125 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 184
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 185 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 244
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 245 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKK 291
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 292 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPN 351
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y I ++ ++ L +Y+EL +L K + KI + Q
Sbjct: 352 VIGEEHYSITRR----VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQP 407
Query: 528 PH 529
H
Sbjct: 408 FH 409
>gi|319761166|ref|YP_004125103.1| ATP synthase F1 subunit beta [Alicycliphilus denitrificans BC]
gi|330823024|ref|YP_004386327.1| ATP synthase F1 subunit beta [Alicycliphilus denitrificans K601]
gi|317115727|gb|ADU98215.1| ATP synthase F1, beta subunit [Alicycliphilus denitrificans BC]
gi|329308396|gb|AEB82811.1| ATP synthase F1, beta subunit [Alicycliphilus denitrificans K601]
Length = 469
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/366 (63%), Positives = 290/366 (79%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + K + + L+ + +VQQQ+G+ IVRTIA G+++G+KR +V +TG
Sbjct: 15 VVDVEFPRDQMPKVYDALKLEGSALTLEVQQQLGDGIVRTIALGSSDGLKRGLMVTNTGN 74
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG+PID +G ++ + + IH P + + +LETGIKVI
Sbjct: 75 PITVPVGKATLGRIMDVLGNPIDERGPVSQELTASIHRKAPAYDELSPSQELLETGIKVI 134
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 135 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 194
Query: 734 KESNVL-------DKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
+S V+ KV+++YGQMNEP GNRLRVALTGL+IAE FR+ G+DVL F+DNIYR
Sbjct: 195 SDSKVVVQEDLSQSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYR 254
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 255 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDP 314
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLDST+VLSR IA LGIYPA+DPL+S S+QLDP++VGEEHY VA V+ LQ+
Sbjct: 315 SPATTFAHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPHVVGEEHYGVARAVQGTLQR 374
Query: 907 YKELKD 912
YKEL+D
Sbjct: 375 YKELRD 380
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 132/323 (40%), Gaps = 40/323 (12%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + + ++ + AP + E L TGIK ID +
Sbjct: 78 VPVGKATLGRIMDVLGNPIDERGPVSQELTASIHRKAPAYDELSPSQELLETGIKVIDLV 137
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K + + ++ +G++ + Y+
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDF-----YH 192
Query: 311 NCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGEYFRDLGQDCLIIYDDL 358
D VVV + S Q P TG TI E FRD G+D L D++
Sbjct: 193 EMSDSKVVVQEDLSQSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNI 252
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P + + RL ER I + G++T
Sbjct: 253 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKVGSIT 299
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L ++ PA++ S SR V G
Sbjct: 300 SIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPHVVGE 359
Query: 474 AQYKIVKKLSGDIRIMLAQYREL 496
Y + + + G L +Y+EL
Sbjct: 360 EHYGVARAVQG----TLQRYKEL 378
>gi|301632657|ref|XP_002945398.1| PREDICTED: ATP synthase subunit beta-like [Xenopus (Silurana)
tropicalis]
Length = 469
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/366 (63%), Positives = 290/366 (79%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + K + + L + +VQQQ+G+ +VRTIA G+++G+KR +V +T
Sbjct: 15 VVDVEFPRDQMPKVYDALKLDGSALTLEVQQQLGDGVVRTIALGSSDGLKRGIMVTNTAN 74
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG+PID +G ++ ++ IH P + + +LETGIKVI
Sbjct: 75 PITVPVGKATLGRIMDVLGNPIDERGPVDQTLRASIHRKAPAYDELSPSQELLETGIKVI 134
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 135 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 194
Query: 734 KESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
+S V++ KVS++YGQMNEP GNRLRVALTGL+IAE FR+ G+DVL F+DNIYR
Sbjct: 195 ADSGVVNLENLGESKVSMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYR 254
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 255 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDP 314
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLDST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY+VA +V+ LQ+
Sbjct: 315 SPATTFAHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQVVGEEHYRVARDVQGTLQR 374
Query: 907 YKELKD 912
YKEL+D
Sbjct: 375 YKELRD 380
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 138/339 (40%), Gaps = 40/339 (11%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID + R ++ + AP +
Sbjct: 62 GLKRGIMVTNTANPITVPVGKATLGRIMDVLGNPIDERGPVDQTLRASIHRKAPAYDELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 122 PSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 181
Query: 295 QKI------------SSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGE 342
++ S ++N+ N + M Y + + TG TI E
Sbjct: 182 ERTREGNDFYHEMADSGVVNLENLGESKVSMVY-----GQMNEPPGNRLRVALTGLTIAE 236
Query: 343 YFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKY 402
FRD G+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 237 SFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------- 289
Query: 403 FLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAIN 462
I + G++T+ + D+T P + D + L ++ PA++
Sbjct: 290 ------ITSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAALGIYPAVD 343
Query: 463 VGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
S SR V G Y++ + D++ L +Y+EL
Sbjct: 344 PLDSTSRQLDPQVVGEEHYRVAR----DVQGTLQRYKEL 378
>gi|297539945|ref|YP_003675714.1| ATP synthase F1 subunit alpha [Methylotenera versatilis 301]
gi|297259292|gb|ADI31137.1| ATP synthase F1, alpha subunit [Methylotenera versatilis 301]
Length = 513
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 228/396 (57%), Positives = 306/396 (77%), Gaps = 2/396 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++T+G C CT +I E+PVG EL+GR+VN+ G+ ID K K + +EK+
Sbjct: 73 AVVLGDYEHITEGDICKCTGRILEVPVGPELIGRVVNALGQPIDGKGPVNAKMTDKIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KS+DSM+P+G+GQRELIIGDRQTGKT +AID IINQK +N+
Sbjct: 133 APGVIARKSVSQPVQTGLKSVDSMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQNMT 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S++ NV+ KL+ + YT+VVAATA+DSAA Q+++PY GCT+GEYFRD
Sbjct: 193 CIYVAIGQKASTVANVVRKLEENGALAYTIVVAATASDSAALQFLAPYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK A AYRQISLLLRRPPGREA+PGDVFY+HSRLLER++++N+ ++EK
Sbjct: 253 GEDALIVYDDLTKQAIAYRQISLLLRRPPGREAYPGDVFYIHSRLLERAARVNEDYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA P+IET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TNGAVKGKTGSLTALPVIETAAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKL G +R+ LAQYREL +F++F+SDLD T+ QL G + LMK
Sbjct: 373 SVSRVGGAAQTKVIKKLGGGVRLALAQYRELAAFAQFASDLDEATRKQLDRGRMFTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFE 561
Q + S+ ++ I LL +F +P ++ FE
Sbjct: 433 QAQYAPLSVSKMAITLLAANKGYFDDVPTNKVLAFE 468
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 154/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ I I TG+ + PVG +GR++N LG PID KG +N+K I
Sbjct: 71 VGAVVLGDYEHITEGDICKCTGRILEVPVGPELIGRVVNALGQPIDGKGPVNAKMTDKIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K +D + P +G + + G GKT ++ I N ++
Sbjct: 131 KVAPGVIARKSVSQPVQTGLKSVDSMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQN 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ + +++E+ L ++ ++ + + G ++ E F
Sbjct: 191 MTC-IYVAIGQKASTVANVVRKLEENGALAYTIVVAATASDSAALQFLAPYAGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + +A ++S +L R P Y + +L ER +
Sbjct: 250 RDRGEDALIVYDDLTKQAIAYRQISLLLRRPPGREAYPGDVFYIHSRLLERAARVNEDYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 310 EKFTNGAVKGKTGSLTALPVIETAAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G KV + V+ L +Y+EL
Sbjct: 370 AGISVSR-----VGGAAQTKVIKKLGGGVRLALAQYREL 403
>gi|291615438|ref|YP_003525595.1| ATP synthase F1, subunit alpha [Sideroxydans lithotrophicus ES-1]
gi|291585550|gb|ADE13208.1| ATP synthase F1, alpha subunit [Sideroxydans lithotrophicus ES-1]
Length = 513
Score = 497 bits (1280), Expect = e-137, Method: Compositional matrix adjust.
Identities = 225/396 (56%), Positives = 305/396 (77%), Gaps = 2/396 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++T+G CT +I E+PVG EL GR+VN+ G+ ID K K + +EK+
Sbjct: 73 AVILGEYEHITEGDTVKCTGRILEVPVGPELRGRVVNALGQPIDGKGPVNAKMTDKIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KSIDSM+P+G+GQRELIIGDRQTGKT +A+D IINQK +N+
Sbjct: 133 APGVIARKSVDQPVQTGLKSIDSMVPVGRGQRELIIGDRQTGKTAVAVDAIINQKGQNMT 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK S++ NV+ KL+ + ++YT+VVAATA+DSAA Q+++PY GCT+GEYFRD
Sbjct: 193 CIYVAVGQKASTVANVVRKLEEHGALEYTIVVAATASDSAAMQFLAPYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N ++E
Sbjct: 253 GEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNAEYVEAF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA PIIET GDV++F+PTNVISITDGQIFL+ +LFN+ RPAIN G+
Sbjct: 313 TKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLEADLFNAGIRPAINAGV 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKL G +R+ LAQYREL +F++F+SDLD T+ QL G ++ LMK
Sbjct: 373 SVSRVGGAAQTKVIKKLGGGVRLALAQYRELAAFAQFASDLDESTRKQLERGRLVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFE 561
Q + S+ ++ L + +F +P+ + FE
Sbjct: 433 QLQYSPLSVSKMASTLFAVNKGYFDDVPVAKALAFE 468
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 151/339 (44%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I V TG+ + PVG GR++N LG PID KG +N+K I
Sbjct: 71 VGAVILGEYEHITEGDTVKCTGRILEVPVGPELRGRVVNALGQPIDGKGPVNAKMTDKIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GKT ++ I N ++
Sbjct: 131 KVAPGVIARKSVDQPVQTGLKSIDSMVPVGRGQRELIIGDRQTGKTAVAVDAIINQKGQN 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ VG+++ + +++E L+ ++ ++ + + G ++ E F
Sbjct: 191 MTC-IYVAVGQKASTVANVVRKLEEHGALEYTIVVAATASDSAAMQFLAPYAGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 250 RDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNAEYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 310 EAFTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLEADLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G KV + V+ L +Y+EL
Sbjct: 370 AGVSVSR-----VGGAAQTKVIKKLGGGVRLALAQYREL 403
>gi|444427213|ref|ZP_21222604.1| F0F1 ATP synthase subunit beta [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444239524|gb|ELU51087.1| F0F1 ATP synthase subunit beta [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 461
Score = 497 bits (1280), Expect = e-137, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 277/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G+KR V TG PI PVG+ TLGRI+NVLG PID G
Sbjct: 43 EVQQQLGGGVVRCIAMGSSDGLKRGLEVESTGHPITVPVGEETLGRIMNVLGHPIDECGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + IH P + Q + +LETG+KVIDL+CPF KGGKIGLFGGAGVGKTVNMM
Sbjct: 103 IGEQVSYEIHRDAPSYEEQSNSTALLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFY+EMKE+ VLDKV+++YGQMNEP GNRLRVA
Sbjct: 163 ELINNIAKAHSGLSVFTGVGERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL+IAE FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTIAERFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LG+YPAIDPL+S
Sbjct: 283 RITSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA +V+ LQ+YKELKD
Sbjct: 343 SRQLDPQVVGQEHYDVARKVQQTLQRYKELKD 374
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 141/330 (42%), Gaps = 23/330 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG E LGRI+N G ID + + + AP ++
Sbjct: 63 GLKRGLEVESTGHPITVPVGEETLGRIMNVLGHPIDECGPIGEQVSYEIHRDAPSYEEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TG+K ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 123 NSTALLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + TG TI E FRD G+D L+
Sbjct: 183 ERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVALTGLTIAERFRDEGRDVLLF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I + N
Sbjct: 243 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKN 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ PAI+ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPQ 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESF 499
V G Y + +K ++ L +Y+EL+
Sbjct: 350 VVGQEHYDVARK----VQQTLQRYKELKDI 375
>gi|222109523|ref|YP_002551787.1| f0f1 ATP synthase subunit beta [Acidovorax ebreus TPSY]
gi|254808148|sp|B9MBA3.1|ATPB_ACIET RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|221728967|gb|ACM31787.1| ATP synthase F1, beta subunit [Acidovorax ebreus TPSY]
Length = 468
Score = 497 bits (1280), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/366 (63%), Positives = 291/366 (79%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + K + + L+ + +VQQQ+G+ +VRTIA G+++G+KR +V +TG
Sbjct: 15 VVDVEFPRDQMPKVYDALKLEGSPLTLEVQQQLGDGVVRTIALGSSDGLKRGLMVTNTGN 74
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG+PID +G ++ + IH P + + +LETGIKVI
Sbjct: 75 PITVPVGKATLGRIMDVLGNPIDERGPVDQSLTASIHRKAPAYDELSPSQELLETGIKVI 134
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 135 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 194
Query: 734 KESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
+S V++ KV+++YGQMNEP GNRLRVALTGL+IAE FR+ G+DVL F+DNIYR
Sbjct: 195 ADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYR 254
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 255 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDP 314
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLDST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY+VA +V+ LQ+
Sbjct: 315 SPATTFAHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQVVGEEHYQVARQVQGTLQR 374
Query: 907 YKELKD 912
YKEL+D
Sbjct: 375 YKELRD 380
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 133/323 (41%), Gaps = 40/323 (12%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + ++ + AP + E L TGIK ID +
Sbjct: 78 VPVGKATLGRIMDVLGNPIDERGPVDQSLTASIHRKAPAYDELSPSQELLETGIKVIDLV 137
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKI------------S 298
P KG + + G GKT ++ I N K + + ++ +G++ S
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADS 197
Query: 299 SLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDL 358
++N+ N + M Y + + TG TI E FRD G+D L D++
Sbjct: 198 GVVNLENLGESKVAMVY-----GQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNI 252
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P + + RL ER I + G++T
Sbjct: 253 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKVGSIT 299
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L ++ PA++ S SR V G
Sbjct: 300 SIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQVVGE 359
Query: 474 AQYKIVKKLSGDIRIMLAQYREL 496
Y++ +++ G L +Y+EL
Sbjct: 360 EHYQVARQVQG----TLQRYKEL 378
>gi|121592742|ref|YP_984638.1| F0F1 ATP synthase subunit beta [Acidovorax sp. JS42]
gi|190358248|sp|A1W2T7.1|ATPB_ACISJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|120604822|gb|ABM40562.1| ATP synthase F1 subcomplex beta subunit [Acidovorax sp. JS42]
Length = 468
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/366 (63%), Positives = 291/366 (79%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + K + + L+ + +VQQQ+G+ +VRTIA G+++G+KR +V +TG
Sbjct: 15 VVDVEFPRDRMPKVYDALKLEGSPLTLEVQQQLGDGVVRTIALGSSDGLKRGLMVTNTGN 74
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG+PID +G ++ + IH P + + +LETGIKVI
Sbjct: 75 PITVPVGKATLGRIMDVLGNPIDERGPVDQSLTASIHRKAPAYDELSPSQELLETGIKVI 134
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 135 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 194
Query: 734 KESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
+S V++ KV+++YGQMNEP GNRLRVALTGL+IAE FR+ G+DVL F+DNIYR
Sbjct: 195 ADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYR 254
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 255 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDP 314
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLDST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY+VA +V+ LQ+
Sbjct: 315 SPATTFAHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQVVGEEHYQVARQVQGTLQR 374
Query: 907 YKELKD 912
YKEL+D
Sbjct: 375 YKELRD 380
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 137/339 (40%), Gaps = 40/339 (11%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID + ++ + AP +
Sbjct: 62 GLKRGLMVTNTGNPITVPVGKATLGRIMDVLGNPIDERGPVDQSLTASIHRKAPAYDELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 122 PSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 181
Query: 295 QKI------------SSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGE 342
++ S ++N+ N + M Y + + TG TI E
Sbjct: 182 ERTREGNDFYHEMADSGVVNLENLGESKVAMVY-----GQMNEPPGNRLRVALTGLTIAE 236
Query: 343 YFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKY 402
FRD G+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 237 SFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------- 289
Query: 403 FLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAIN 462
I + G++T+ + D+T P + D + L ++ PA++
Sbjct: 290 ------ITSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAALGIYPAVD 343
Query: 463 VGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
S SR V G Y++ +++ G L +Y+EL
Sbjct: 344 PLDSTSRQLDPQVVGEEHYQVARQVQG----TLQRYKEL 378
>gi|148652007|ref|YP_001279100.1| F0F1 ATP synthase subunit alpha [Psychrobacter sp. PRwf-1]
gi|172048448|sp|A5WBV9.1|ATPA_PSYWF RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|148571091|gb|ABQ93150.1| ATP synthase F1, alpha subunit [Psychrobacter sp. PRwf-1]
Length = 514
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/403 (58%), Positives = 307/403 (76%), Gaps = 2/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D L +GQK +CT +I E+PVG ELLGR+V++ G ID K K + VEKI
Sbjct: 74 AVVLGDYLGLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDGKGPINAKLTDKVEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV+EP++TG K++D+MIPIG+GQRELIIGDRQTGKT +AID II QKN +
Sbjct: 134 APGVIARQSVDEPVMTGYKAVDTMIPIGRGQRELIIGDRQTGKTAMAIDAIIAQKNSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ + YT VV A+A++ AA QYI+PY+GCT+GEYFRD
Sbjct: 194 CVYVAIGQKRSTIANVVRKLEETGALAYTTVVVASASEPAALQYIAPYSGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++E+
Sbjct: 254 GEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNAAYVEEF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+++LFNS RPA+N G+
Sbjct: 314 TNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESSLFNSGIRPAVNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKLSG IR LAQYREL +F++F+SDLD TK QL +GE+++ LMK
Sbjct: 374 SVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFAQFASDLDDATKQQLDHGERVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
QK ++ SI E ++ + IP+++I +E ++Y
Sbjct: 434 QKQYQPMSIAEQAAVIFASNEGYLSAIPVEKIGAWEEAYLRYM 476
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 159/343 (46%), Gaps = 27/343 (7%)
Query: 588 ENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKS 647
++ V + G+ G++ TG+ + PVG LGR+++ LG+PID KG IN+K
Sbjct: 69 QDSVGAVVLGDYLGLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDGKGPINAKLTD 128
Query: 648 PIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIA 707
+ + P + + + TG K +D + P +G + + G GKT ++ I IA
Sbjct: 129 KVEKIAPGVIARQSVDEPVMTGYKAVDTMIPIGRGQRELIIGDRQTGKTAMAIDAI--IA 186
Query: 708 IEHKGCS-VFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSI 766
++ G V++ +G++ + +++E+ L +++ +EP+ + +G ++
Sbjct: 187 QKNSGIKCVYVAIGQKRSTIANVVRKLEETGALAYTTVVVASASEPAALQYIAPYSGCTM 246
Query: 767 AEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST- 825
E FR+ G+D L+ D++ + +A ++S +L R P Y + +L ER S
Sbjct: 247 GEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVN 306
Query: 826 --------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIY 871
+ G++T++ I A D++ P+ + D I L + GI
Sbjct: 307 AAYVEEFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESSLFNSGIR 366
Query: 872 PAIDPLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
PA++ S S+ + G K+ + ++ L +Y+EL
Sbjct: 367 PAVNAGISVSR-----VGGAAQTKIIKKLSGGIRTALAQYREL 404
>gi|153833268|ref|ZP_01985935.1| ATP synthase F1, beta subunit [Vibrio harveyi HY01]
gi|156977318|ref|YP_001448224.1| F0F1 ATP synthase subunit beta [Vibrio harveyi ATCC BAA-1116]
gi|269961117|ref|ZP_06175485.1| ATP synthase subunit B [Vibrio harveyi 1DA3]
gi|388600817|ref|ZP_10159213.1| F0F1 ATP synthase subunit beta [Vibrio campbellii DS40M4]
gi|424031390|ref|ZP_17770840.1| ATP synthase F1, beta subunit [Vibrio cholerae HENC-01]
gi|424034907|ref|ZP_17774264.1| ATP synthase F1, beta subunit [Vibrio cholerae HENC-02]
gi|424043213|ref|ZP_17780853.1| ATP synthase F1, beta subunit [Vibrio cholerae HENC-03]
gi|190358281|sp|A7N6Q5.1|ATPB2_VIBHB RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
synthase F1 sector subunit beta 2; AltName:
Full=F-ATPase subunit beta 2
gi|148870404|gb|EDL69325.1| ATP synthase F1, beta subunit [Vibrio harveyi HY01]
gi|156528912|gb|ABU73997.1| hypothetical protein VIBHAR_06104 [Vibrio harveyi ATCC BAA-1116]
gi|269834068|gb|EEZ88159.1| ATP synthase subunit B [Vibrio harveyi 1DA3]
gi|408878558|gb|EKM17555.1| ATP synthase F1, beta subunit [Vibrio cholerae HENC-01]
gi|408889345|gb|EKM27764.1| ATP synthase F1, beta subunit [Vibrio cholerae HENC-03]
gi|408901389|gb|EKM33862.1| ATP synthase F1, beta subunit [Vibrio cholerae HENC-02]
Length = 461
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 235/332 (70%), Positives = 277/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G+KR V TG PI PVG+ TLGRI+NVLG PID G
Sbjct: 43 EVQQQLGGGVVRCIAMGSSDGLKRGLEVESTGNPITVPVGEETLGRIMNVLGHPIDECGP 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + IH P + Q + +LETG+KVIDL+CPF KGGKIGLFGGAGVGKTVNMM
Sbjct: 103 IGEQVSYEIHRDAPSYEEQSNSTALLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFY+EMKE+ VLDKV+++YGQMNEP GNRLRVA
Sbjct: 163 ELINNIAKAHSGLSVFTGVGERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL+IAE FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLTIAERFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STKNG+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LG+YPAIDPL+S
Sbjct: 283 RITSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY VA +V+ LQ+YKELKD
Sbjct: 343 SRQLDPQVVGQEHYDVARKVQQTLQRYKELKD 374
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 141/330 (42%), Gaps = 23/330 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG E LGRI+N G ID + + + AP ++
Sbjct: 63 GLKRGLEVESTGNPITVPVGEETLGRIMNVLGHPIDECGPIGEQVSYEIHRDAPSYEEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TG+K ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 123 NSTALLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++K +D +V + + TG TI E FRD G+D L+
Sbjct: 183 ERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVALTGLTIAERFRDEGRDVLLF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + L E + +++I + N
Sbjct: 243 VDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKN 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L N+ PAI+ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPQ 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESF 499
V G Y + +K ++ L +Y+EL+
Sbjct: 350 VVGQEHYDVARK----VQQTLQRYKELKDI 375
>gi|312794895|ref|YP_004027817.1| ATP synthase subunit beta [Burkholderia rhizoxinica HKI 454]
gi|312166670|emb|CBW73673.1| ATP synthase beta chain (EC 3.6.3.14) [Burkholderia rhizoxinica HKI
454]
Length = 463
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/332 (69%), Positives = 276/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G++ G++R V +TG PI PVG TLGRI++VLG PID G
Sbjct: 45 EVQQQLGDGVVRTICLGSSEGLRRGLTVKNTGNPITVPVGTPTLGRIMDVLGRPIDEAGP 104
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+ + IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 105 ISHENTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 164
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 165 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 224
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 225 LTGLTMAEHFRDEGRDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 284
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 285 RITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 344
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ++KEL+D
Sbjct: 345 SRQIDPNVIGEEHYTITRSVQQTLQRFKELRD 376
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 134/311 (43%), Gaps = 23/311 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID +N ++ + AP + E L TGIK ID +
Sbjct: 81 VPVGTPTLGRIMDVLGRPIDEAGPISHENTRSIHQKAPAFDELSPSTELLETGIKVIDLI 140
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K ++ +G++ + +++K
Sbjct: 141 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 200
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
N +D +V + + TG T+ E+FRD G+D L D++ + A ++S
Sbjct: 201 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGRDVLFFVDNIYRFTLAGTEVSA 260
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P V Y L E K+ +++I + G++T+ + D+
Sbjct: 261 LLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKTGSITSVQAVYVPADDL 307
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P D + L ++ + PA++ S SR V G Y I +
Sbjct: 308 TDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYTITRS---- 363
Query: 486 IRIMLAQYREL 496
++ L +++EL
Sbjct: 364 VQQTLQRFKEL 374
>gi|90415392|ref|ZP_01223326.1| ATP synthase subunit A [gamma proteobacterium HTCC2207]
gi|90332715|gb|EAS47885.1| ATP synthase subunit A [marine gamma proteobacterium HTCC2207]
Length = 514
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 224/404 (55%), Positives = 308/404 (76%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D ++L +GQK CT ++ E+PVG EL GR+V++ G ID K + +EK+
Sbjct: 74 AVVLGDYQSLAEGQKARCTGRVLEVPVGPELEGRVVDALGNPIDGKGPVNAAITDAIEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG+++R+SV++P+ G+K+ID+M+PIG+GQRELIIGDRQ GKT IA+D IINQK +
Sbjct: 134 APGVIERQSVDQPVQIGLKAIDAMVPIGRGQRELIIGDRQIGKTAIAVDAIINQKGSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK +S+ V+ KL+ + M++T+VVAATA+D AA Q+++P+ GC++GEY+RD
Sbjct: 194 CIYVAVGQKAASVAAVVRKLEEHGAMEHTIVVAATASDPAAMQFLAPFAGCSMGEYYRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD L+IYDDLTK AWAYRQISLLL+RPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 254 GQDALVIYDDLTKQAWAYRQISLLLKRPPGREAYPGDVFYLHSRLLERAARVNADYVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA P+IET GDV++F+PTNVISITDGQIFL+ ++FN+ RPA+N G+
Sbjct: 314 TNGDVKGQTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLEADMFNAGVRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKLSG IR LAQYREL +FS+F+SDLD TK QL +GE+++ LMK
Sbjct: 374 SVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFSQFASDLDDATKAQLDHGERVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK + SI E+ +++ N F + + +I FE ++ Y +
Sbjct: 434 QKQYSPQSIAEMGVMVYAADNGFLQAVEVNKIGDFEAALLSYMK 477
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 150/342 (43%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ + TG+ + PVG GR+++ LG+PID KG +N+ I
Sbjct: 72 VGAVVLGDYQSLAEGQKARCTGRVLEVPVGPELEGRVVDALGNPIDGKGPVNAAITDAIE 131
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++ G+K ID + P +G + + G +GKT ++ I I
Sbjct: 132 KVAPGVIERQSVDQPVQIGLKAIDAMVPIGRGQRELIIGDRQIGKTAIAVDAI----INQ 187
Query: 711 KGCS---VFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG +++ VG+++ +++E ++ ++ ++P+ + G S+
Sbjct: 188 KGSGIKCIYVAVGQKAASVAAVVRKLEEHGAMEHTIVVAATASDPAAMQFLAPFAGCSMG 247
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E +R+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 248 EYYRDRGQDALVIYDDLTKQAWAYRQISLLLKRPPGREAYPGDVFYLHSRLLERAARVNA 307
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
+ G++T++ I A D++ P+ + D I L + G+ P
Sbjct: 308 DYVEKFTNGDVKGQTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLEADMFNAGVRP 367
Query: 873 AIDPLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
A++ S S+ + G K+ + ++ L +Y+EL
Sbjct: 368 AMNAGISVSR-----VGGAAQTKIIKKLSGGIRTALAQYREL 404
>gi|107024491|ref|YP_622818.1| F0F1 ATP synthase subunit beta [Burkholderia cenocepacia AU 1054]
gi|116688130|ref|YP_833753.1| F0F1 ATP synthase subunit beta [Burkholderia cenocepacia HI2424]
gi|170731477|ref|YP_001763424.1| F0F1 ATP synthase subunit beta [Burkholderia cenocepacia MC0-3]
gi|171315826|ref|ZP_02905057.1| ATP synthase F1, beta subunit [Burkholderia ambifaria MEX-5]
gi|254246698|ref|ZP_04940019.1| hypothetical protein BCPG_01455 [Burkholderia cenocepacia PC184]
gi|421866792|ref|ZP_16298455.1| ATP synthase beta chain [Burkholderia cenocepacia H111]
gi|118573513|sp|Q1BRB0.1|ATPB_BURCA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|166201694|sp|A0K2Y3.1|ATPB_BURCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|226739983|sp|B1JSV7.1|ATPB_BURCC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|105894680|gb|ABF77845.1| ATP synthase F1 subcomplex beta subunit [Burkholderia cenocepacia
AU 1054]
gi|116646219|gb|ABK06860.1| ATP synthase F1 subcomplex beta subunit [Burkholderia cenocepacia
HI2424]
gi|124871474|gb|EAY63190.1| hypothetical protein BCPG_01455 [Burkholderia cenocepacia PC184]
gi|169814719|gb|ACA89302.1| ATP synthase F1, beta subunit [Burkholderia cenocepacia MC0-3]
gi|171099015|gb|EDT43800.1| ATP synthase F1, beta subunit [Burkholderia ambifaria MEX-5]
gi|358073277|emb|CCE49333.1| ATP synthase beta chain [Burkholderia cenocepacia H111]
Length = 464
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 274/332 (82%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R V +T KPI PVG TLGRI++VLG PID G
Sbjct: 45 EVQQQLGDGVVRTICLGASDGLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGP 104
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 105 IESDVTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 164
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 165 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 224
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 225 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 284
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 285 RITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 344
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 345 SRQIDPNVIGEEHYSITRRVQQTLQRYKELRD 376
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 146/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID ++ + AP +
Sbjct: 65 GLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGPIESDVTRSIHQKAPAFDELS 124
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 125 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 184
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 185 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 244
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 245 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKK 291
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 292 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPN 351
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y I ++ ++ L +Y+EL +L K + KI + Q
Sbjct: 352 VIGEEHYSITRR----VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQP 407
Query: 528 PH 529
H
Sbjct: 408 FH 409
>gi|392952568|ref|ZP_10318123.1| ATP synthase F1 subunit beta [Hydrocarboniphaga effusa AP103]
gi|391861530|gb|EIT72058.1| ATP synthase F1 subunit beta [Hydrocarboniphaga effusa AP103]
Length = 467
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 231/339 (68%), Positives = 277/339 (81%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VR IA G++ G+KR V+TG PI PVG TLGRI+NVLG+PID G
Sbjct: 40 EVQQQLGDGVVRAIALGSSEGLKRGLEAVNTGAPISVPVGPATLGRIMNVLGEPIDEVGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ ++ IH P + +Q + +LETGIKVIDLLCPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 VEAQSHWAIHREAPTYEDQAGSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA H G SVF GVGER+REGNDFYHEM ES V+D KV+++YGQMNEP
Sbjct: 160 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMMESGVVDEKNLGNSKVAMVYGQMNEPP 219
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 220 GNRLRVALTGLTMAEYFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 279
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA
Sbjct: 280 EMGQLQERITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPA 339
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP ++GEEHY A +V+ LQ+YKELKD
Sbjct: 340 VDPLDSTSRQLDPNVIGEEHYGTARDVQGLLQRYKELKD 378
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 148/343 (43%), Gaps = 30/343 (8%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + + L +G + T +PVG LGRI+N GE ID ++ + +
Sbjct: 52 AIALGSSEGLKRGLEAVNTGAPISVPVGPATLGRIMNVLGEPIDEVGPVEAQSHWAIHRE 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP D+ E L TGIK ID + P KG + + G GKT ++ I N K +
Sbjct: 112 APTYEDQAGSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSG 171
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMD-------YTVVVAATAADSAAEQYISPYTGCT 339
+ ++ +G++ + +++ +D +V + + TG T
Sbjct: 172 LSVFAGVGERTREGNDFYHEMMESGVVDEKNLGNSKVAMVYGQMNEPPGNRLRVALTGLT 231
Query: 340 IGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKI 399
+ EYFRD G+D L D++ ++ A ++S LL R P V Y L E ++
Sbjct: 232 MAEYFRDEGRDILFFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGQL 284
Query: 400 NKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRP 459
+++I + G++T+ + D+T P + D + L ++ + P
Sbjct: 285 ------QERITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYP 338
Query: 460 AINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
A++ S SR V G Y + D++ +L +Y+EL+
Sbjct: 339 AVDPLDSTSRQLDPNVIGEEHYGTAR----DVQGLLQRYKELK 377
>gi|254000516|ref|YP_003052579.1| F0F1 ATP synthase subunit beta [Methylovorus glucosetrophus SIP3-4]
gi|313202475|ref|YP_004041133.1| ATP synthase f1 subunit beta [Methylovorus sp. MP688]
gi|253987195|gb|ACT52052.1| ATP synthase F1, beta subunit [Methylovorus glucosetrophus SIP3-4]
gi|312441791|gb|ADQ85897.1| ATP synthase F1, beta subunit [Methylovorus sp. MP688]
Length = 465
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/332 (69%), Positives = 276/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G+ R V TG I PVG TLGRI++VLG PID G
Sbjct: 46 EVQQQLGDGVVRTIAMGSSDGLSRGMKVKSTGNQIQVPVGHGTLGRIMDVLGRPIDEAGP 105
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++ IH P F + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 106 IECDERRSIHQKAPSFEELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 165
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV +++GQMNEP GNRLRVA
Sbjct: 166 ELINNIAKQHAGLSVFAGVGERTREGNDFYHEMKDSNVLDKVGMVFGQMNEPPGNRLRVA 225
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQE
Sbjct: 226 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 285
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 286 RITSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDST 345
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP IVGEEHY VA V+ LQ+YKEL+D
Sbjct: 346 SRQLDPLIVGEEHYNVARAVQSTLQRYKELRD 377
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 137/327 (41%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G K T ++PVG LGRI++ G ID R ++ + AP +
Sbjct: 66 GLSRGMKVKSTGNQIQVPVGHGTLGRIMDVLGRPIDEAGPIECDERRSIHQKAPSFEELS 125
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + ++ +G
Sbjct: 126 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHAGLSVFAGVG 185
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 186 ERTREGNDFYHEMKDSNVLDKVGMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFF 245
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + RL ER I +
Sbjct: 246 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKV 292
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 293 GSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPL 352
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
+ G Y + + ++ L +Y+EL
Sbjct: 353 IVGEEHYNVARA----VQSTLQRYKEL 375
>gi|433522619|ref|ZP_20479301.1| ATP synthase F1, beta subunit [Neisseria meningitidis 61103]
gi|432257583|gb|ELL12880.1| ATP synthase F1, beta subunit [Neisseria meningitidis 61103]
Length = 465
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/365 (64%), Positives = 286/365 (78%), Gaps = 6/365 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E I + + + L N +VQQ +G+ +VRTIA G+++G+KR V +TG
Sbjct: 13 VVDVEFPRDMIPRVYDALKLDENGLTLEVQQLLGDGVVRTIAMGSSDGLKRGMTVSNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG P+D G I++ K IH PKF +LETGIKVI
Sbjct: 73 PITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQAAPKFDELSSTTELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DLLCPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRF 787
K+SNVLDKV+++YGQMNEP GNRLRVALT L++AE FR+ G+DVL F+DNIYR+
Sbjct: 193 KDSNVLDKVAMVYGQMNEPPGNRLRVALTCLTMAEYFRDEKDENGKGRDVLFFVDNIYRY 252
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPS 847
TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPS
Sbjct: 253 TLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPS 312
Query: 848 PSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKY 907
P+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKY
Sbjct: 313 PATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKY 372
Query: 908 KELKD 912
KEL+D
Sbjct: 373 KELRD 377
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 150/364 (41%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRIV+ G +D + + AP +
Sbjct: 60 GLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQAAPKFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 STTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + T T+ EYFRD G
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTCLTMAEYFRDEKDENGKG 239
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 286
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 287 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 346
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 347 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVM 396
Query: 524 MKQK 527
+K
Sbjct: 397 RARK 400
>gi|167587928|ref|ZP_02380316.1| F0F1 ATP synthase subunit beta [Burkholderia ubonensis Bu]
Length = 459
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 275/332 (82%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R V +T KPI PVG TLGRI++VLG PID G
Sbjct: 40 EVQQQLGDGVVRTICLGASDGLRRGLTVKNTNKPISVPVGKPTLGRIMDVLGRPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S+ IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IESEHTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 220 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 279
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 280 RITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 339
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 340 SRQIDPNVIGEEHYTITRRVQQTLQRYKELRD 371
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 148/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID ++ ++ + AP +
Sbjct: 60 GLRRGLTVKNTNKPISVPVGKPTLGRIMDVLGRPIDEAGPIESEHTRSIHQKAPAFDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 120 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 239
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 240 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKK 286
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 287 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPN 346
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y I ++ ++ L +Y+EL +L K + KI + Q
Sbjct: 347 VIGEEHYTITRR----VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQP 402
Query: 528 PH 529
H
Sbjct: 403 FH 404
>gi|352080868|ref|ZP_08951807.1| ATP synthase F1, beta subunit [Rhodanobacter sp. 2APBS1]
gi|389798556|ref|ZP_10201570.1| F0F1 ATP synthase subunit beta [Rhodanobacter sp. 116-2]
gi|351684149|gb|EHA67225.1| ATP synthase F1, beta subunit [Rhodanobacter sp. 2APBS1]
gi|388444718|gb|EIM00815.1| F0F1 ATP synthase subunit beta [Rhodanobacter sp. 116-2]
Length = 470
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 235/338 (69%), Positives = 281/338 (83%), Gaps = 6/338 (1%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQ +G+ IVRTIA G+T G+KR +TG+ I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQVLGDGIVRTIALGSTEGLKRGLAARNTGEGIKVPVGKQTLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + + IH P +++Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEQDRWVIHREAPSYADQAAANDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFYHEMK+SNVLDKV+++YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKAHAGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
LTGL++AE FR+ GKDVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 220 LTGLTMAEYFRDEKDEHGKGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 279
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+
Sbjct: 280 MGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAV 339
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL+S S+QLDP ++G+EHY VA +V+ LQ+YKELKD
Sbjct: 340 DPLDSTSRQLDPNVIGQEHYDVARKVQGTLQRYKELKD 377
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 150/337 (44%), Gaps = 29/337 (8%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T + ++PVG + LGRI++ G ID ++R + + AP D+
Sbjct: 59 EGLKRGLAARNTGEGIKVPVGKQTLGRIMDVLGNPIDEAGPIGEQDRWVIHREAPSYADQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ N+ L TGIK ID + P KG + + G GKT ++ I N K + ++ +
Sbjct: 119 AAANDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHAGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------L 347
G++ + +++K N +D +V + + TG T+ EYFRD
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDEHGK 238
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D L+ D++ ++ A ++S LL R P V Y L E + ++
Sbjct: 239 GKDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QE 285
Query: 408 KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSV 467
+I + G++T+ + D+T P + D + L N+ + PA++ S
Sbjct: 286 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDST 345
Query: 468 SR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESF 499
SR V G Y + +K+ G L +Y+EL+
Sbjct: 346 SRQLDPNVIGQEHYDVARKVQG----TLQRYKELKDI 378
>gi|429744296|ref|ZP_19277795.1| ATP synthase F1, beta subunit [Neisseria sp. oral taxon 020 str.
F0370]
gi|429163243|gb|EKY05488.1| ATP synthase F1, beta subunit [Neisseria sp. oral taxon 020 str.
F0370]
Length = 467
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/346 (67%), Positives = 284/346 (82%), Gaps = 7/346 (2%)
Query: 573 LKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLG 632
++N +++ +VQQ +G+ +VRTIA G+++G+KR V +TG PI PVG TLGRI++VLG
Sbjct: 35 VENGLTL-EVQQLLGDGVVRTIAMGSSDGLKRGMEVHNTGAPITVPVGKETLGRIMDVLG 93
Query: 633 DPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAG 692
+P+D G +N+ IH PKF +LETGIKVIDLLCPF KGGK+GLFGGAG
Sbjct: 94 NPVDEAGPVNAAHTRAIHQEAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAG 153
Query: 693 VGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEP 752
VGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+SNVLDKV+++YGQMNEP
Sbjct: 154 VGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEP 213
Query: 753 SGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVG 806
GNRLRVALTGL++AE FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVG
Sbjct: 214 PGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVG 273
Query: 807 YQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIA 866
YQPTLAEEMG+LQERI+ST+ G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA
Sbjct: 274 YQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIA 333
Query: 867 ELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LGIYPA+DPL+S S+QLDP ++G+EHY VA V+ LQKYKEL+D
Sbjct: 334 SLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRD 379
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 154/364 (42%), Gaps = 35/364 (9%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG E LGRI++ G +D + + + AP +
Sbjct: 62 GLKRGMEVHNTGAPITVPVGKETLGRIMDVLGNPVDEAGPVNAAHTRAIHQEAPKFDELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
S E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 122 STTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------LG 348
++ + +++K N +D +V + + TG T+ EYFRD G
Sbjct: 182 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKG 241
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 242 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------- 288
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 289 ITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTS 348
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
R V G Y + + ++ L +Y+EL + I+ +L + +K++++
Sbjct: 349 RQLDPMVLGQEHYDVARG----VQSTLQKYKELRDI------IAILGMDELSDEDKLTVM 398
Query: 524 MKQK 527
+K
Sbjct: 399 RARK 402
>gi|444378443|ref|ZP_21177641.1| ATP synthase beta chain [Enterovibrio sp. AK16]
gi|443677429|gb|ELT84112.1| ATP synthase beta chain [Enterovibrio sp. AK16]
Length = 467
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 237/368 (64%), Positives = 298/368 (80%), Gaps = 9/368 (2%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + ++ + + +N+K + +VQQQ+G IVRTIA G+++G++R V +T
Sbjct: 13 VVDVEFPQESVPQVYDALNVKREGERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLEVENT 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
G+PI PVG TLGRI+NVLGD ID +GEI K++ IH P + +Q +LETG+K
Sbjct: 73 GRPIEVPVGTETLGRIMNVLGDSIDERGEIGEKERYSIHREAPSYEDQSNATELLETGVK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
VIDL+CPF KGGKIGLFGGAGVGKTVNMMELI NIA++H G SVF GVGER+REGNDFY+
Sbjct: 133 VIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYY 192
Query: 732 EMKESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNI 784
EM+E+ V++ KV+++YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNI
Sbjct: 193 EMQEAGVVNVENPAESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNI 252
Query: 785 YRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLT 844
YR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK+G+ITSVQA+YVPADDLT
Sbjct: 253 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSVQAVYVPADDLT 312
Query: 845 DPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYL 904
DPSP+TTF HLD+T+VLSR IA LG+YPAIDPL+S S+QLDP ++G+EHY VA V+ L
Sbjct: 313 DPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPLVIGQEHYDVARGVQSVL 372
Query: 905 QKYKELKD 912
Q+YKELKD
Sbjct: 373 QRYKELKD 380
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 150/342 (43%), Gaps = 40/342 (11%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T + E+PVG E LGRI+N G+ ID + + K R ++ + AP D+
Sbjct: 62 GLRRGLEVENTGRPIEVPVGTETLGRIMNVLGDSIDERGEIGEKERYSIHREAPSYEDQS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TG+K ID + P KG + + G GKT ++ I N + + ++ +G
Sbjct: 122 NATELLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGE 342
++ + YY + VV A+S Q P TG T+ E
Sbjct: 182 ERTREGNDF-----YYEMQEAGVVNVENPAESKVAMVYGQMNEPPGNRLRVALTGLTMAE 236
Query: 343 YFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKY 402
FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 237 KFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL--- 286
Query: 403 FLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAIN 462
+++I + +G++T+ + D+T P + D + L N+ PAI+
Sbjct: 287 ---QERITSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAID 343
Query: 463 VGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESF 499
S SR V G Y + + ++ +L +Y+EL+
Sbjct: 344 PLDSTSRQLDPLVIGQEHYDVARG----VQSVLQRYKELKDI 381
>gi|380510232|ref|ZP_09853639.1| F0F1 ATP synthase subunit beta [Xanthomonas sacchari NCPPB 4393]
Length = 475
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/369 (62%), Positives = 289/369 (78%), Gaps = 13/369 (3%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + ++ +VQQQ+G+ +VRTIA G+T+G+KR+ + +TGK I
Sbjct: 16 VEFARADVPKIYDALKVEGTAITLEVQQQLGDGVVRTIALGSTDGLKRHLVATNTGKAIA 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID +G + S + IH P +++Q + +LETGIKVIDL+
Sbjct: 76 VPVGTATLGRIMNVLGEPIDERGPVQSDVQWEIHREAPDYADQSSSTELLETGIKVIDLM 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNM+ELI NIA EH G SVF GVGER+REGNDFYHEM ++
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMLELINNIATEHSGLSVFAGVGERTREGNDFYHEMSDA 195
Query: 737 NVL-------DKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDN 783
NV+ KV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DN
Sbjct: 196 NVIVQDDLSKSKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDANGKGRDVLFFVDN 255
Query: 784 IYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDL 843
IYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDL
Sbjct: 256 IYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDL 315
Query: 844 TDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFY 903
TDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+QLDP ++G EHY A V+
Sbjct: 316 TDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPNVIGHEHYDTARRVQST 375
Query: 904 LQKYKELKD 912
LQKYKELKD
Sbjct: 376 LQKYKELKD 384
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 141/336 (41%), Gaps = 46/336 (13%)
Query: 186 TEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGI 245
T K +PVG LGRI+N GE ID + + + + AP D+ S E L TGI
Sbjct: 70 TGKAIAVPVGTATLGRIMNVLGEPIDERGPVQSDVQWEIHREAPDYADQSSSTELLETGI 129
Query: 246 KSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCIGQKISSLINVI 304
K ID M P KG + + G GKT ++ I N ++ + ++ +G++ +
Sbjct: 130 KVIDLMCPFAKGGKVGLFGGAGVGKTVNMLELINNIATEHSGLSVFAGVGERTREGNDF- 188
Query: 305 NKLKYYNCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGEYFRD------ 346
Y+ D V+V + S Q P TG T+ EYFRD
Sbjct: 189 ----YHEMSDANVIVQDDLSKSKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDANG 244
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L D++ ++ A ++S LL R P V Y L E + +
Sbjct: 245 KGRDVLFFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------Q 291
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L N+ + PA++ S
Sbjct: 292 ERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDS 351
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y ++ ++ L +Y+EL+
Sbjct: 352 TSRQLDPNVIGHEHYDTARR----VQSTLQKYKELK 383
>gi|88811293|ref|ZP_01126549.1| ATP synthase subunit B [Nitrococcus mobilis Nb-231]
gi|88791832|gb|EAR22943.1| ATP synthase subunit B [Nitrococcus mobilis Nb-231]
Length = 465
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/339 (68%), Positives = 280/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQ QIG +VRTIA G+T+G++R V +TG PI PVG TLGRI++VLG P+D +G
Sbjct: 40 EVQHQIGGGVVRTIAMGSTDGLRRGVKVSNTGAPISVPVGVKTLGRIMDVLGRPVDERGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ +K+ IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNM+
Sbjct: 100 VGAKETMSIHRQAPAFDELAASTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNML 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVL-------DKVSLIYGQMNEPS 753
ELI NIA EH G SVF GVGER+REGNDFYHEM ES V+ KV+++YGQMNEP
Sbjct: 160 ELINNIAKEHGGLSVFAGVGERTREGNDFYHEMAESGVIKLDDLPESKVAMVYGQMNEPP 219
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVAL+GL++AE FR+ G+DVLLFIDNIYR+TLAG EVSA+LGR PSAVGYQPTLAE
Sbjct: 220 GNRLRVALSGLTMAEYFRDEGRDVLLFIDNIYRYTLAGVEVSALLGRMPSAVGYQPTLAE 279
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMGKLQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIAELGIYPA
Sbjct: 280 EMGKLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFGHLDATVVLSRQIAELGIYPA 339
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP +VG+EHY+VA +V+ LQ+YKELKD
Sbjct: 340 VDPLDSTSRQLDPLVVGQEHYQVARQVQGTLQRYKELKD 378
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 143/335 (42%), Gaps = 30/335 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T +PVG + LGRI++ G +D + K ++ + AP +
Sbjct: 60 GLRRGVKVSNTGAPISVPVGVKTLGRIMDVLGRPVDERGPVGAKETMSIHRQAPAFDELA 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N K + ++ +G
Sbjct: 120 ASTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMLELINNIAKEHGGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISP-------YTGCTIGEYFRDL 347
++ + +++ + + + A + P +G T+ EYFRD
Sbjct: 180 ERTREGNDFYHEMAESGVIKLDDLPESKVAMVYGQMNEPPGNRLRVALSGLTMAEYFRDE 239
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D L+ D++ ++ A ++S LL R P V Y L E K+ ++
Sbjct: 240 GRDVLLFIDNIYRYTLAGVEVSALLGR------MPSAVGY-QPTLAEEMGKL------QE 286
Query: 408 KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSV 467
+I + G++T+ + D+T P D + L + PA++ S
Sbjct: 287 RITSTKTGSITSIQAVYVPADDLTDPSPATTFGHLDATVVLSRQIAELGIYPAVDPLDST 346
Query: 468 SR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y++ +++ G L +Y+EL+
Sbjct: 347 SRQLDPLVVGQEHYQVARQVQG----TLQRYKELK 377
>gi|384085859|ref|ZP_09997034.1| F0F1 ATP synthase subunit alpha [Acidithiobacillus thiooxidans ATCC
19377]
Length = 514
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 228/403 (56%), Positives = 304/403 (75%), Gaps = 2/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + L +G CT K+ ++P+G ELLGR+VN+ G+ ID K K + +EKI
Sbjct: 74 AVVLGEFSGLEEGGIVKCTGKVMQVPIGKELLGRVVNALGQPIDGKGPVDAKEFDVLEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR+SV+EP+ TG+KSID+M+P+G+GQRELIIGDRQTGKT +A+D IINQK K V
Sbjct: 134 APGVVDRQSVDEPMQTGVKSIDAMVPVGRGQRELIIGDRQTGKTAVAVDAIINQKGKGVY 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK S++ V+ KL+ Y M+YT V+AA A++SAA QY++PY+GCT+GE+FRD
Sbjct: 194 CIYVAVGQKASTVAGVVRKLEEYGAMEYTTVIAANASESAAMQYLAPYSGCTMGEFFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N F+EK
Sbjct: 254 GMDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNTDFVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQI+L+T+LFNS RPAIN GL
Sbjct: 314 THGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIYLETDLFNSGIRPAINAGL 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQYREL +F++F+SDLD +T+ Q+ G++++ L+K
Sbjct: 374 SVSRVGGAAQTKIIKKLGGGIRLDLAQYRELAAFAQFASDLDEITRKQIERGKRVTELLK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
Q S+ E + L + + + ++ FE ++ Y
Sbjct: 434 QDQFSPMSVAEQAVALFAASSGALDDVEVAKVRPFEKALLAYL 476
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 163/353 (46%), Gaps = 30/353 (8%)
Query: 577 ISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPID 636
+++N Q +G + G +G++ IV TGK + P+G LGR++N LG PID
Sbjct: 63 LAMNLEQDNVG-----AVVLGEFSGLEEGGIVKCTGKVMQVPIGKELLGRVVNALGQPID 117
Query: 637 NKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKT 696
KG +++K+ + + P ++ + ++TG+K ID + P +G + + G GKT
Sbjct: 118 GKGPVDAKEFDVLEKIAPGVVDRQSVDEPMQTGVKSIDAMVPVGRGQRELIIGDRQTGKT 177
Query: 697 VNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNR 756
++ I N + C +++ VG+++ +++E ++ ++I +E + +
Sbjct: 178 AVAVDAIINQKGKGVYC-IYVAVGQKASTVAGVVRKLEEYGAMEYTTVIAANASESAAMQ 236
Query: 757 LRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMG 816
+G ++ E FR+ G D L+ D++ + A ++S +L R P Y +
Sbjct: 237 YLAPYSGCTMGEFFRDRGMDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 296
Query: 817 KLQERISST---------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVL 861
+L ER + K G++T++ I A D++ P+ + D I L
Sbjct: 297 RLLERAARVNTDFVEKFTHGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIYL 356
Query: 862 SRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
+ GI PAI+ S S+ + G K+ + ++ L +Y+EL
Sbjct: 357 ETDLFNSGIRPAINAGLSVSR-----VGGAAQTKIIKKLGGGIRLDLAQYREL 404
>gi|270158435|ref|ZP_06187092.1| ATP synthase F1 subunit alpha [Legionella longbeachae D-4968]
gi|289166726|ref|YP_003456864.1| ATP synthase F1 subunit alpha [Legionella longbeachae NSW150]
gi|269990460|gb|EEZ96714.1| ATP synthase F1 subunit alpha [Legionella longbeachae D-4968]
gi|288859899|emb|CBJ13885.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Legionella
longbeachae NSW150]
Length = 517
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 231/404 (57%), Positives = 305/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +L +GQK CT +I E+PVG LLGR+V++ G ID K +EK+
Sbjct: 77 AVVLGEYSSLAEGQKGKCTGRILEVPVGKGLLGRVVDALGNPIDGKGPIEASGMSPIEKV 136
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+K+ID+MIP+G+GQRELIIGDRQTGKT IAID IINQK V
Sbjct: 137 APGVIARKSVDQPVQTGLKAIDAMIPVGRGQRELIIGDRQTGKTAIAIDAIINQKGTGVK 196
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK SS+ ++ KL+ ++ +++T+VV A A+DSAA Q+I+PY GCT+GEYF +
Sbjct: 197 CIYVAVGQKASSVAAIVRKLEEHDALEHTIVVVAGASDSAALQFIAPYAGCTMGEYFMEH 256
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGD+FYLHSRLLER+++IN +EK
Sbjct: 257 GEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDIFYLHSRLLERAARINADEVEKL 316
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFLD +LFNS RPAIN GL
Sbjct: 317 THGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLDVDLFNSGVRPAINSGL 376
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G R+ LAQ+RELE+FS+F+SDLD T+ QL G++I+ LMK
Sbjct: 377 SVSRVGGAAQTKIMKKLGGGTRLALAQFRELEAFSQFASDLDDATRKQLERGQRITELMK 436
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK + S+ E+ L +++ + +P+ +I FE ++ Y R
Sbjct: 437 QKQYSPLSVAEMGTALFVVEKGYLDDVPVNEIAAFEASLHDYMR 480
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 147/323 (45%), Gaps = 31/323 (9%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + PVG LGR+++ LG+PID KG I + SPI + P + + ++TG+
Sbjct: 95 TGRILEVPVGKGLLGRVVDALGNPIDGKGPIEASGMSPIEKVAPGVIARKSVDQPVQTGL 154
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSV---FIGVGERSREGN 727
K ID + P +G + + G GKT ++ I I KG V ++ VG+++
Sbjct: 155 KAIDAMIPVGRGQRELIIGDRQTGKTAIAIDAI----INQKGTGVKCIYVAVGQKASSVA 210
Query: 728 DFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRF 787
+++E + L+ ++ ++ + + G ++ E F G+D L+ D++ +
Sbjct: 211 AIVRKLEEHDALEHTIVVVAGASDSAALQFIAPYAGCTMGEYFMEHGEDALIVYDDLTKQ 270
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTL---------------AEEMGKLQERISSTKNGTITS 832
A ++S +L R P Y + A+E+ KL K G++T+
Sbjct: 271 AWAYRQISLLLRRPPGREAYPGDIFYLHSRLLERAARINADEVEKLTHGEVKGKTGSLTA 330
Query: 833 VQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEE 892
+ I A D++ P+ + D I L + G+ PAI+ S S+ + G
Sbjct: 331 LPIIETQAGDVSAFVPTNVISITDGQIFLDVDLFNSGVRPAINSGLSVSR-----VGGAA 385
Query: 893 HYKVANEV----KFYLQKYKELK 911
K+ ++ + L +++EL+
Sbjct: 386 QTKIMKKLGGGTRLALAQFRELE 408
>gi|388458047|ref|ZP_10140342.1| F0F1 ATP synthase subunit alpha [Fluoribacter dumoffii Tex-KL]
Length = 517
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 230/404 (56%), Positives = 304/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +L +GQK CT +I E+PVG LLGR+V++ G ID K +EK+
Sbjct: 77 AVVLGEYSSLAEGQKGKCTGRILEVPVGKGLLGRVVDALGNPIDGKGPIDAAGMSPIEKV 136
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+K+ID+MIP+G+GQRELIIGDRQTGKT IAID IINQK V
Sbjct: 137 APGVISRKSVDQPVQTGLKAIDAMIPVGRGQRELIIGDRQTGKTAIAIDAIINQKGTGVK 196
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK SS+ ++ KL+ + +++T+VV A A+DSAA Q+I+PY GCT+GEYF +
Sbjct: 197 CIYVAVGQKASSVAAIVRKLEEHGALEHTIVVVAGASDSAALQFIAPYAGCTMGEYFMER 256
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGD+FYLHSRLLER+++IN +EK
Sbjct: 257 GEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDIFYLHSRLLERAARINAEEVEKL 316
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFLD +LFNS RPAIN GL
Sbjct: 317 TNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLDVDLFNSGVRPAINSGL 376
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G R+ LAQ+RELE+FS+F+SDLD T+ QL G++I+ LMK
Sbjct: 377 SVSRVGGAAQTKIMKKLGGGTRLALAQFRELEAFSQFASDLDDATRKQLERGQRITELMK 436
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK + S+ E+ L +++ + +P+ ++ FE ++ Y R
Sbjct: 437 QKQYSPLSVAEMGTALFVVEKGYLDDVPVNEVAAFEASLHDYMR 480
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 148/323 (45%), Gaps = 31/323 (9%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + PVG LGR+++ LG+PID KG I++ SPI + P ++ + ++TG+
Sbjct: 95 TGRILEVPVGKGLLGRVVDALGNPIDGKGPIDAAGMSPIEKVAPGVISRKSVDQPVQTGL 154
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSV---FIGVGERSREGN 727
K ID + P +G + + G GKT ++ I I KG V ++ VG+++
Sbjct: 155 KAIDAMIPVGRGQRELIIGDRQTGKTAIAIDAI----INQKGTGVKCIYVAVGQKASSVA 210
Query: 728 DFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRF 787
+++E L+ ++ ++ + + G ++ E F G+D L+ D++ +
Sbjct: 211 AIVRKLEEHGALEHTIVVVAGASDSAALQFIAPYAGCTMGEYFMERGEDALIVYDDLTKQ 270
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTL---------------AEEMGKLQERISSTKNGTITS 832
A ++S +L R P Y + AEE+ KL K G++T+
Sbjct: 271 AWAYRQISLLLRRPPGREAYPGDIFYLHSRLLERAARINAEEVEKLTNGEVKGKTGSLTA 330
Query: 833 VQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEE 892
+ I A D++ P+ + D I L + G+ PAI+ S S+ + G
Sbjct: 331 LPIIETQAGDVSAFVPTNVISITDGQIFLDVDLFNSGVRPAINSGLSVSR-----VGGAA 385
Query: 893 HYKVANEV----KFYLQKYKELK 911
K+ ++ + L +++EL+
Sbjct: 386 QTKIMKKLGGGTRLALAQFRELE 408
>gi|18073050|emb|CAC88857.1| atpD beta synthase chain [Azorhizophilus paspali]
Length = 349
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 228/317 (71%), Positives = 272/317 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VR+IA G+T G+KR V +TG I PVG TLGRI++VLG+PID G
Sbjct: 22 EVQQQLGDGVVRSIAMGSTEGLKRGLNVNNTGAGIAVPVGKATLGRIMDVLGNPIDEAGP 81
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P ++ Q N +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 82 IGEEERWTIHRAAPSYAEQAGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 141
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIA+EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 142 ELIRNIAMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 201
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 202 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 261
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 262 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDST 321
Query: 881 SKQLDPYIVGEEHYKVA 897
S+QLDP ++G+EHY A
Sbjct: 322 SRQLDPLVIGQEHYDTA 338
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 133/303 (43%), Gaps = 14/303 (4%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
++ + + L +G T +PVG LGRI++ G ID + R T+ +
Sbjct: 34 SIAMGSTEGLKRGLNVNNTGAGIAVPVGKATLGRIMDVLGNPIDEAGPIGEEERWTIHRA 93
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP ++ NE L TGIK ID + P KG + + G GKT ++ I N +
Sbjct: 94 APSYAEQAGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSG 153
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++K N +D +V + + TG T+ E FRD
Sbjct: 154 YSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRD 213
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L+ D++ ++ A ++S LL R P V Y + + + + +
Sbjct: 214 EGRDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQ 260
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L ++ + PA++ S
Sbjct: 261 ERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDS 320
Query: 467 VSR 469
SR
Sbjct: 321 TSR 323
>gi|407801813|ref|ZP_11148656.1| ATP synthase subunit alpha [Alcanivorax sp. W11-5]
gi|407024130|gb|EKE35874.1| ATP synthase subunit alpha [Alcanivorax sp. W11-5]
Length = 514
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 229/403 (56%), Positives = 308/403 (76%), Gaps = 2/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D + +GQK CT +I E+PVG ELLGR+V++ G ID K K E VEK+
Sbjct: 74 AVVLGDYLGVAEGQKVKCTGRILEVPVGPELLGRVVDALGNPIDGKGPLNTKITEPVEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+K+ID+M P+G+GQRELIIGDRQ GKT IAIDTIINQKN +
Sbjct: 134 APGVIWRKSVDQPVQTGLKAIDAMTPVGRGQRELIIGDRQIGKTAIAIDTIINQKNSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S++ NV+ KL+ + ++ T++VAA+A+D AA QY++P+ GC++GEYFRD
Sbjct: 194 CIYVAIGQKQSTIANVVRKLEEHGALENTIIVAASASDPAAMQYLAPFAGCSMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D L++YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N+ ++E+
Sbjct: 254 GEDALVVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEQF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIF++T+LFNS RPA+N G+
Sbjct: 314 TNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFVETDLFNSGIRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQYREL +F++F+SDLD T+ QL +G++ + LMK
Sbjct: 374 SVSRVGGAAQTKIIKKLGGGIRLALAQYRELAAFAQFASDLDEATRAQLEHGQRATELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
QK S+ E+ ++L I F + + +I FE ++ Y
Sbjct: 434 QKQFSPQSVAEMGVVLYAINEGFLKDVALDKIGKFEAALLDYM 476
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 155/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ G+ V TG+ + PVG LGR+++ LG+PID KG +N+K P+
Sbjct: 72 VGAVVLGDYLGVAEGQKVKCTGRILEVPVGPELLGRVVDALGNPIDGKGPLNTKITEPVE 131
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G +GKT ++ I N
Sbjct: 132 KVAPGVIWRKSVDQPVQTGLKAIDAMTPVGRGQRELIIGDRQIGKTAIAIDTIINQKNSG 191
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G++ + +++E L+ ++ ++P+ + G S+ E F
Sbjct: 192 IKC-IYVAIGQKQSTIANVVRKLEEHGALENTIIVAASASDPAAMQYLAPFAGCSMGEYF 250
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 251 RDRGEDALVVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYV 310
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I + + GI PA++
Sbjct: 311 EQFTNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFVETDLFNSGIRPAMN 370
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G K+ + ++ L +Y+EL
Sbjct: 371 AGISVSR-----VGGAAQTKIIKKLGGGIRLALAQYREL 404
>gi|90415394|ref|ZP_01223328.1| ATP synthase subunit B [gamma proteobacterium HTCC2207]
gi|90332717|gb|EAS47887.1| ATP synthase subunit B [marine gamma proteobacterium HTCC2207]
Length = 465
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 235/339 (69%), Positives = 280/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G + G+ R VV+T PI PVG TLGRI++VLG+PID KG
Sbjct: 40 EVQQQLGDGVVRTIAMGASEGVSRGLGVVNTKAPISVPVGVETLGRIMDVLGNPIDEKGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I K++ IH PP + ++++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEKERMAIHRKPPAYDELAASDDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA EH G SVF GVGER+REGNDFY+EM+ES V++ KV+++YGQMNEP
Sbjct: 160 ELINNIATEHSGLSVFAGVGERTREGNDFYYEMQESGVVNIETPSESKVAMVYGQMNEPP 219
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE+FR+ GKDVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 220 GNRLRVALTGLTMAEKFRDEGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 279
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLDST+VLSR IA GIYPA
Sbjct: 280 EMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASKGIYPA 339
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP I+G EHY VA V+ LQ+YKELKD
Sbjct: 340 VDPLDSTSRQLDPLIIGTEHYAVARGVQSVLQRYKELKD 378
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 148/341 (43%), Gaps = 40/341 (11%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ +++G T+ +PVG E LGRI++ G ID K K R + + P +
Sbjct: 59 EGVSRGLGVVNTKAPISVPVGVETLGRIMDVLGNPIDEKGPIGEKERMAIHRKPPAYDEL 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ ++ L TGIK ID + P KG + + G GKT ++ I N ++ + ++ +
Sbjct: 119 AASDDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIATEHSGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAE----QYISP--------YTGCTIG 341
G++ + YY + VV T ++S Q P TG T+
Sbjct: 179 GERTREGNDF-----YYEMQESGVVNIETPSESKVAMVYGQMNEPPGNRLRVALTGLTMA 233
Query: 342 EYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINK 401
E FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 234 EKFRDEGKDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL-- 284
Query: 402 YFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAI 461
+++I + G++T+ + D+T P + D + L ++ + PA+
Sbjct: 285 ----QERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASKGIYPAV 340
Query: 462 NVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ S SR + G Y + + ++ +L +Y+EL+
Sbjct: 341 DPLDSTSRQLDPLIIGTEHYAVARG----VQSVLQRYKELK 377
>gi|112791362|gb|ABI21951.1| ATP synthase beta subunit, partial [Erwinia chrysanthemi]
Length = 344
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 230/328 (70%), Positives = 275/328 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G+++G++R V PI PVG TLGRI+NVLG+P+D KG
Sbjct: 17 EVQQQLGGGLVRCIAMGSSDGLRRGLKVTSLAHPIEVPVGKATLGRIMNVLGEPVDMKGP 76
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 77 IGEEERWAIHRAAPTYEELSNSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 136
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELIRNIAIEH G SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP G+RLRVA
Sbjct: 137 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGSRLRVA 196
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 197 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 256
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+ LSRQIA LGIYPA+DPL+S
Sbjct: 257 RITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDST 316
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYK 908
S+QLDP IVG+EHY VA V+ LQ+Y+
Sbjct: 317 SRQLDPLIVGQEHYDVARGVQSILQRYQ 344
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 128/295 (43%), Gaps = 14/295 (4%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K E+PVG LGRI+N GE +D K + R + + AP +
Sbjct: 37 GLRRGLKVTSLAHPIEVPVGKATLGRIMNVLGEPVDMKGPIGEEERWAIHRAAPTYEELS 96
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 97 NSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 156
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 157 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGSRLRVALTGLTMAEKFRDEGRDVLLF 216
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 217 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 263
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 264 GSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSR 318
>gi|149911798|ref|ZP_01900402.1| ATP synthase subunit B [Moritella sp. PE36]
gi|149805144|gb|EDM65166.1| ATP synthase subunit B [Moritella sp. PE36]
Length = 461
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 230/332 (69%), Positives = 277/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQIG +VR I G+++G++R V +TG I PVGD LGRI+NVLG+PID KG
Sbjct: 43 EVQQQIGGGVVRCIVMGSSDGLRRGLKVTNTGSAISVPVGDACLGRIVNVLGNPIDGKGA 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + + IH P + Q +N +LETG+KVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 103 IPTDVRYEIHRAAPSYEEQSLSNELLETGVKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFY+EM+E+ VLDKV+++YGQMNEP GNRLRVA
Sbjct: 163 ELINNIAKAHSGLSVFAGVGERTREGNDFYYEMEEAGVLDKVAMVYGQMNEPPGNRLRVA 222
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGLS+AE FR+ GKDVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQE
Sbjct: 223 LTGLSMAERFRDEGKDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGILQE 282
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK+G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VL+R IA +G+YPAIDPL+S
Sbjct: 283 RITSTKSGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLNRNIASMGMYPAIDPLDST 342
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG+EHY +A V+ LQ+Y ELKD
Sbjct: 343 SRQLDPLVVGQEHYDIARGVQGVLQRYTELKD 374
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 144/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T +PVG LGRIVN G ID K R + + AP ++
Sbjct: 63 GLRRGLKVTNTGSAISVPVGDACLGRIVNVLGNPIDGKGAIPTDVRYEIHRAAPSYEEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
NE L TG+K ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 123 LSNELLETGVKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ +D +V + + TG ++ E FRD G+D L+
Sbjct: 183 ERTREGNDFYYEMEEAGVLDKVAMVYGQMNEPPGNRLRVALTGLSMAERFRDEGKDVLLF 242
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + + + + +++I + +
Sbjct: 243 IDNIYRYTLAGTEVSALLGRMPSAVGY-------------QPTLAEEMGILQERITSTKS 289
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L+ N+ + PAI+ S SR
Sbjct: 290 GSITSIQAVYVPADDLTDPSPATTFAHLDATVVLNRNIASMGMYPAIDPLDSTSRQLDPL 349
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y I + + G +L +Y EL+
Sbjct: 350 VVGQEHYDIARGVQG----VLQRYTELK 373
>gi|410695056|ref|YP_003625678.1| ATP synthase subunit beta, sodium ion specific (Na(+)-translocating
ATPase subunit beta) [Thiomonas sp. 3As]
gi|294341481|emb|CAZ89898.1| ATP synthase subunit beta, sodium ion specific (Na(+)-translocating
ATPase subunit beta) [Thiomonas sp. 3As]
Length = 471
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 227/332 (68%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQIG+ +VRTIA G+++G++R +V +TG I PVG LGRI++VLG PID G
Sbjct: 52 EVQQQIGDGVVRTIAMGSSDGLRRGMLVNNTGHSIQVPVGPAVLGRIMDVLGRPIDEAGP 111
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++++ IH PKF + + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 112 IATEERRSIHQSAPKFDDLSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 171
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV +++GQMNEP GNRLRVA
Sbjct: 172 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVGMVFGQMNEPPGNRLRVA 231
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLA+EMGKLQE
Sbjct: 232 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGKLQE 291
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 292 RITSTKTGSITSIQAVYVPADDLTDPSPATTFNHLDATVVLSRDIASLGIYPAVDPLDST 351
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY V+ LQ+YKEL+D
Sbjct: 352 SRQIDPNVIGEEHYSTTRAVQGILQRYKELRD 383
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 152/361 (42%), Gaps = 25/361 (6%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G T ++PVG +LGRI++ G ID + R ++ + AP D
Sbjct: 73 LRRGMLVNNTGHSIQVPVGPAVLGRIMDVLGRPIDEAGPIATEERRSIHQSAPKFDDLSP 132
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G+
Sbjct: 133 SVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVGE 192
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 193 RTREGNDFYHEMKDSNVLDKVGMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFV 252
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P V Y L + K+ +++I + G
Sbjct: 253 DNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLADEMGKL------QERITSTKTG 299
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L ++ + PA++ S SR V
Sbjct: 300 SITSIQAVYVPADDLTDPSPATTFNHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNV 359
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKP 528
G Y + + G +L +Y+EL +L K + KI + Q
Sbjct: 360 IGEEHYSTTRAVQG----ILQRYKELRDIIAILGMDELSPEDKQAVARARKIQRFLSQPF 415
Query: 529 H 529
H
Sbjct: 416 H 416
>gi|350560210|ref|ZP_08929050.1| ATP synthase F1, alpha subunit [Thioalkalivibrio thiocyanoxidans
ARh 4]
gi|349782478|gb|EGZ36761.1| ATP synthase F1, alpha subunit [Thioalkalivibrio thiocyanoxidans
ARh 4]
Length = 513
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/404 (57%), Positives = 303/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D KN+++G CT +I E+PVG LLGR+V++ G ID K +EKI
Sbjct: 73 AVVLGDYKNISEGDTVRCTGRILEVPVGAGLLGRVVDALGRPIDGKGPVATDMTTPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG+++R+SV++PL TG+K+IDSM+PIG+GQRELIIGDRQTGKT +A+D IINQ V
Sbjct: 133 APGVIERQSVSQPLQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAVAVDAIINQIGSGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK SS+ NV+ +L+ M++T++VAA A++SAA Q+I+PY+GC++GEYFRD
Sbjct: 193 CIYVAVGQKASSVANVVRRLEDAGAMEHTIIVAANASESAAMQFIAPYSGCSMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++E+
Sbjct: 253 GEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERASRVNAEYVEQF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN GL
Sbjct: 313 TNGEVTGRTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGL 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G +R+ LAQYREL +FS+F+SDLD +T+ QL G++++ LMK
Sbjct: 373 SVSRVGGAAQTKIIKKLGGGVRLALAQYRELAAFSQFASDLDELTRKQLDRGKRVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q SI E+ L F + QI FE ++ Y R
Sbjct: 433 QGQFSPLSIAEMAFSLFAANEGFLDDVEADQIVRFEKALLDYIR 476
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 153/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ I V TG+ + PVG LGR+++ LG PID KG + + +PI
Sbjct: 71 VGAVVLGDYKNISEGDTVRCTGRILEVPVGAGLLGRVVDALGRPIDGKGPVATDMTTPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TG+K ID + P +G + + G GKT ++ I N
Sbjct: 131 KIAPGVIERQSVSQPLQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAVAVDAIINQIGSG 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ VG+++ + ++++ ++ ++ +E + + +G S+ E F
Sbjct: 191 VKC-IYVAVGQKASSVANVVRRLEDAGAMEHTIIVAANASESAAMQFIAPYSGCSMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERIS------- 823
R+ G+D L+ D++ + A +VS +L R P Y + +L ER S
Sbjct: 250 RDRGEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERASRVNAEYV 309
Query: 824 --------STKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
+ + G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 310 EQFTNGEVTGRTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G K+ + V+ L +Y+EL
Sbjct: 370 AGLSVSR-----VGGAAQTKIIKKLGGGVRLALAQYREL 403
>gi|395760427|ref|ZP_10441096.1| F0F1 ATP synthase subunit beta [Janthinobacterium lividum PAMC
25724]
Length = 466
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 231/354 (65%), Positives = 284/354 (80%), Gaps = 7/354 (1%)
Query: 566 KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLG 625
K F + + + +VQQQ+G+ IVRTIA G+++G++R ++ +TGKPI+ PVG TLG
Sbjct: 25 KVFDALKMAGSELTLEVQQQLGDGIVRTIALGSSDGLRRGMMIQNTGKPIMVPVGKATLG 84
Query: 626 RILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKI 685
RI++VLG+PID G ++ ++ + IH P + + +LETGIKVIDL+CPF KGGK+
Sbjct: 85 RIMDVLGNPIDECGPVSHEQVASIHRTAPAYDELSPSQELLETGIKVIDLVCPFAKGGKV 144
Query: 686 GLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD----- 740
GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM ++ V+D
Sbjct: 145 GLFGGAGVGKTVNMMELINNIAKAHSGVSVFAGVGERTREGNDFYHEMADAKVVDLENPE 204
Query: 741 --KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAML 798
KV+++YGQMNEP GNRLRVALTGL+IAE FR+ GKDVL F+DNIYRFTLAGTEVSA+L
Sbjct: 205 NSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGKDVLFFVDNIYRFTLAGTEVSALL 264
Query: 799 GRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDST 858
GR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADD TDPSP+TTF HLDST
Sbjct: 265 GRMPSAVGYQPTLAEEMGRLQERITSTKTGSITSIQAVYVPADDYTDPSPATTFAHLDST 324
Query: 859 IVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+ LSR IA LGIYPA+DPL+S S+QLDP IVG+EHY A V+ LQ+YKEL+D
Sbjct: 325 VALSRDIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDTARAVQTTLQRYKELRD 378
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 153/387 (39%), Gaps = 40/387 (10%)
Query: 132 RCLNQTLNIKFANNTV--------LSGQINGTTGYEEAAAQGFV-AVLIDDLKNLTQGQK 182
+C+ ++++F N + ++G T ++ G V + + L +G
Sbjct: 8 QCIGAVVDVEFPRNAMPKVFDALKMAGS-ELTLEVQQQLGDGIVRTIALGSSDGLRRGMM 66
Query: 183 CFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLL 242
T K +PVG LGRI++ G ID + ++ + AP + E L
Sbjct: 67 IQNTGKPIMVPVGKATLGRIMDVLGNPIDECGPVSHEQVASIHRTAPAYDELSPSQELLE 126
Query: 243 TGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLI 301
TGIK ID + P KG + + G GKT ++ I N K + + ++ +G++
Sbjct: 127 TGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGVSVFAGVGERTREGN 186
Query: 302 NVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
+ +++ +D +V + + TG TI E FRD G+D L
Sbjct: 187 DFYHEMADAKVVDLENPENSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGKDVLFF 246
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P + + RL ER I +
Sbjct: 247 VDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKT 293
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D T P + D + L ++ + PA++ S SR
Sbjct: 294 GSITSIQAVYVPADDYTDPSPATTFAHLDSTVALSRDIASLGIYPAVDPLDSTSRQLDPL 353
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
+ G Y + ++ L +Y+EL
Sbjct: 354 IVGQEHYDTARA----VQTTLQRYKEL 376
>gi|89257060|ref|YP_514422.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
holarctica LVS]
gi|115315416|ref|YP_764139.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
holarctica OSU18]
gi|156503270|ref|YP_001429335.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|254368299|ref|ZP_04984318.1| ATP synthase alpha chain [Francisella tularensis subsp. holarctica
257]
gi|290953657|ref|ZP_06558278.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
holarctica URFT1]
gi|422939315|ref|YP_007012462.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
holarctica FSC200]
gi|423051441|ref|YP_007009875.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
holarctica F92]
gi|119367954|sp|Q2A1I0.1|ATPA_FRATH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|122324598|sp|Q0BK82.1|ATPA_FRATO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|166201665|sp|A7NEH6.1|ATPA_FRATF RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|89144891|emb|CAJ80236.1| ATP synthase alpha chain [Francisella tularensis subsp. holarctica
LVS]
gi|115130315|gb|ABI83502.1| H(+)-transporting two-sector ATPase [Francisella tularensis subsp.
holarctica OSU18]
gi|134254108|gb|EBA53202.1| ATP synthase alpha chain [Francisella tularensis subsp. holarctica
257]
gi|156253873|gb|ABU62379.1| ATP synthase F1, alpha subunit [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|407294466|gb|AFT93372.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
holarctica FSC200]
gi|421952163|gb|AFX71412.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
holarctica F92]
Length = 513
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/396 (58%), Positives = 304/396 (76%), Gaps = 2/396 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++ +G K +CT +I E+PVG LLGR+V++ G ID K + +EKI
Sbjct: 73 AVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEVATDLTSPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++ L TGIKSIDSM+PIG+GQRELIIGDRQ GKT IA+DTIINQK V
Sbjct: 133 APGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTIINQKGTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S++ N++ +L+ Y M++T++VAATA+DSAA QYI+PY GC++GEYFRD
Sbjct: 193 CIYVAIGQKASTIANIVRQLEEYGAMEHTIIVAATASDSAALQYIAPYAGCSMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N+ ++EK
Sbjct: 253 GQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GD+++F+PTNVISITDGQIFL+T+LFNS RPAIN G
Sbjct: 313 TNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRPAINPGN 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQYRELE+FS+F+SDLD T+ QL G++++ L+K
Sbjct: 373 SVSRVGGAAQTKIIKKLGGGIRLALAQYRELEAFSQFASDLDEATRAQLNRGQRVTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFE 561
QK S+ + + L N + + + ++ FE
Sbjct: 433 QKQFSTLSVALMALSLYAADNGYLDNLEVSEVIPFE 468
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 158/343 (46%), Gaps = 31/343 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ IK TG+ + PVG+ LGR+++ LG+PID KGE+ + SPI
Sbjct: 71 VGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEVATDLTSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TGIK ID + P +G + + G +GKT ++ I I
Sbjct: 131 KIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTI----INQ 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ +G+++ + +++E ++ ++ ++ + + G S+
Sbjct: 187 KGTGVKCIYVAIGQKASTIANIVRQLEEYGAMEHTIIVAATASDSAALQYIAPYAGCSMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 247 EYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNE 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + G+ P
Sbjct: 307 EYVEKFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKELK 911
AI+P S S+ + G K+ + ++ L +Y+EL+
Sbjct: 367 AINPGNSVSR-----VGGAAQTKIIKKLGGGIRLALAQYRELE 404
>gi|444365675|ref|ZP_21165797.1| ATP synthase F1, beta subunit [Burkholderia cenocepacia
K56-2Valvano]
gi|443605787|gb|ELT73611.1| ATP synthase F1, beta subunit [Burkholderia cenocepacia
K56-2Valvano]
Length = 464
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 274/332 (82%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R V +T KPI PVG TLGRI++VLG PID G
Sbjct: 45 EVQQQLGDGVVRTICLGASDGLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGP 104
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+S IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 105 IDSDVTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 164
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+S VLDKV+L+YGQMNEP GNRLRVA
Sbjct: 165 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSKVLDKVALVYGQMNEPPGNRLRVA 224
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 225 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 284
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 285 RITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 344
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 345 SRQIDPNVIGEEHYSITRRVQQTLQRYKELRD 376
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 145/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID ++ + AP +
Sbjct: 65 GLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGPIDSDVTRSIHQKAPAFDELS 124
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 125 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 184
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K +D +V + + TG T+ E+FRD G D L
Sbjct: 185 ERTREGNDFYHEMKDSKVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 244
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 245 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKK 291
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 292 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPN 351
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y I ++ ++ L +Y+EL +L K + KI + Q
Sbjct: 352 VIGEEHYSITRR----VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQP 407
Query: 528 PH 529
H
Sbjct: 408 FH 409
>gi|257454338|ref|ZP_05619601.1| ATP synthase F1, beta subunit [Enhydrobacter aerosaccus SK60]
gi|257448241|gb|EEV23221.1| ATP synthase F1, beta subunit [Enhydrobacter aerosaccus SK60]
Length = 466
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/362 (65%), Positives = 286/362 (79%), Gaps = 6/362 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ + + + ++ + +VQQQ+G+ IVRTIA G+T G+KR V +TG PI
Sbjct: 16 VEFDRQSVPRIYDALKVEGTETTLEVQQQLGDGIVRTIAMGSTEGLKRGLPVSNTGAPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G + IH P + Q + +LETGIKVIDLL
Sbjct: 76 VPVGKGTLGRIMDVLGRPIDEAGPVEHSNTWAIHREAPSYDEQSNSTELLETGIKVIDLL 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK+S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDS 195
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLA 790
NVLDKV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLA
Sbjct: 196 NVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLA 255
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPST 850
GTEVSA+LGR PSAVGYQPTLAEEMG LQERI+ST++G+ITSVQA+YVPADDLTDPSP+T
Sbjct: 256 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTQSGSITSVQAVYVPADDLTDPSPAT 315
Query: 851 TFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
TF HLD+T+VLSR IA GIYPA+DPL+S S+QLDP ++GEEHY VA V+ LQ++KEL
Sbjct: 316 TFAHLDATVVLSRDIASQGIYPAVDPLDSTSRQLDPLVIGEEHYAVARGVQEVLQRFKEL 375
Query: 911 KD 912
KD
Sbjct: 376 KD 377
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 158/373 (42%), Gaps = 39/373 (10%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG LGRI++ G ID N + + AP ++
Sbjct: 59 EGLKRGLPVSNTGAPISVPVGKGTLGRIMDVLGRPIDEAGPVEHSNTWAIHREAPSYDEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +
Sbjct: 119 SNSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------L 347
G++ + +++K N +D +V + + TG T+ EYFRD
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D L+ D++ ++ A ++S LL R P V Y L E + ++
Sbjct: 239 GRDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QE 285
Query: 408 KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSV 467
+I + +G++T+ + D+T P + D + L ++ + PA++ S
Sbjct: 286 RITSTQSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDST 345
Query: 468 SR-----VGGAAQYKIVKKLSGDIRIMLAQYRELES------FSKFSSDLDIVTKTQLYN 516
SR V G Y + + ++ +L +++EL+ + S D +V +Y
Sbjct: 346 SRQLDPLVIGEEHYAVARG----VQEVLQRFKELKDIIAILGMDELSEDDKLV----VYR 397
Query: 517 GEKISLLMKQKPH 529
KI + Q H
Sbjct: 398 ARKIQRFLSQPFH 410
>gi|170699474|ref|ZP_02890517.1| ATP synthase F1, beta subunit [Burkholderia ambifaria IOP40-10]
gi|170135623|gb|EDT03908.1| ATP synthase F1, beta subunit [Burkholderia ambifaria IOP40-10]
Length = 464
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 273/332 (82%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R V +T PI PVG TLGRI++VLG PID G
Sbjct: 45 EVQQQLGDGVVRTICLGASDGLRRGLTVKNTANPISVPVGKPTLGRIMDVLGRPIDEAGP 104
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 105 IESATTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 164
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 165 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 224
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 225 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 284
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 285 RITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 344
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 345 SRQIDPNVIGEEHYSITRRVQQTLQRYKELRD 376
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 145/362 (40%), Gaps = 25/362 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID ++ + AP +
Sbjct: 65 GLRRGLTVKNTANPISVPVGKPTLGRIMDVLGRPIDEAGPIESATTRSIHQKAPAFDELS 124
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 125 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 184
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 185 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 244
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 245 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKK 291
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 292 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPN 351
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y I ++ ++ L +Y+EL +L K + KI + Q
Sbjct: 352 VIGEEHYSITRR----VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQP 407
Query: 528 PH 529
H
Sbjct: 408 FH 409
>gi|296137183|ref|YP_003644425.1| ATP synthase F1 subunit beta [Thiomonas intermedia K12]
gi|295797305|gb|ADG32095.1| ATP synthase F1, beta subunit [Thiomonas intermedia K12]
Length = 471
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 227/332 (68%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQIG+ +VRTIA G+++G++R +V +TG I PVG LGRI++VLG PID G
Sbjct: 52 EVQQQIGDGVVRTIAMGSSDGLRRGMLVNNTGHSIQVPVGPAVLGRIMDVLGRPIDEAGP 111
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + ++ IH PKF + + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 112 IATDERRSIHQSAPKFDDLSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 171
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEMK+SNVLDKV +++GQMNEP GNRLRVA
Sbjct: 172 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVGMVFGQMNEPPGNRLRVA 231
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLA+EMGKLQE
Sbjct: 232 LTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGKLQE 291
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 292 RITSTKTGSITSIQAVYVPADDLTDPSPATTFNHLDATVVLSRDIASLGIYPAVDPLDST 351
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY V+ LQ+YKEL+D
Sbjct: 352 SRQIDPNVIGEEHYSTTRAVQGILQRYKELRD 383
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 151/361 (41%), Gaps = 25/361 (6%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G T ++PVG +LGRI++ G ID R ++ + AP D
Sbjct: 73 LRRGMLVNNTGHSIQVPVGPAVLGRIMDVLGRPIDEAGPIATDERRSIHQSAPKFDDLSP 132
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G+
Sbjct: 133 SVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVGE 192
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 193 RTREGNDFYHEMKDSNVLDKVGMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFV 252
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P V Y L + K+ +++I + G
Sbjct: 253 DNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLADEMGKL------QERITSTKTG 299
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L ++ + PA++ S SR V
Sbjct: 300 SITSIQAVYVPADDLTDPSPATTFNHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNV 359
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKP 528
G Y + + G +L +Y+EL +L K + KI + Q
Sbjct: 360 IGEEHYSTTRAVQG----ILQRYKELRDIIAILGMDELSPEDKLAVARARKIQRFLSQPF 415
Query: 529 H 529
H
Sbjct: 416 H 416
>gi|254483172|ref|ZP_05096405.1| ATP synthase F1, alpha subunit [marine gamma proteobacterium
HTCC2148]
gi|214036543|gb|EEB77217.1| ATP synthase F1, alpha subunit [marine gamma proteobacterium
HTCC2148]
Length = 514
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 226/404 (55%), Positives = 303/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D K+L +GQ C CT +I E+PVG EL GR+V++ G ID K + +EK+
Sbjct: 74 AVILGDYKSLAEGQSCRCTGRILEVPVGPELQGRVVDALGSPIDGKGPVNAAMTDALEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ G+K++D+M+PIG+GQRELIIGDRQ GKT IA+D IINQK +
Sbjct: 134 APGVIARQSVDQPVQIGLKAVDAMVPIGRGQRELIIGDRQIGKTAIAVDAIINQKGSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK SS+ V+ KL+ + M++T+VVAATA+D AA Q+++P+ GCT+GEY+RD
Sbjct: 194 CVYVAIGQKASSVAAVVRKLEEHGAMEHTIVVAATASDPAAMQFLAPFAGCTMGEYYRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N ++E
Sbjct: 254 GEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNAKYVEDF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA P+IET GDV++F+PTNVISITDGQIFL+ ++FN+ RPA+N G+
Sbjct: 314 TNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLEADMFNAGVRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKLSG IR LAQYREL +FS+F+SDLD TK QL +GE+++ LMK
Sbjct: 374 SVSRVGGAAQAKIIKKLSGGIRTALAQYRELAAFSQFASDLDDATKAQLDHGERVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK + SI E+ ++L + + +I FE ++ Y
Sbjct: 434 QKQYSPQSIAEMGLLLYAANEGMLSDVDVAKIGDFEDALLSYMH 477
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 144/322 (44%), Gaps = 31/322 (9%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + PVG GR+++ LG PID KG +N+ + + P + + ++ G+
Sbjct: 92 TGRILEVPVGPELQGRVVDALGSPIDGKGPVNAAMTDALEKVAPGVIARQSVDQPVQIGL 151
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCS---VFIGVGERSREGN 727
K +D + P +G + + G +GKT ++ I I KG V++ +G+++
Sbjct: 152 KAVDAMVPIGRGQRELIIGDRQIGKTAIAVDAI----INQKGSGIKCVYVAIGQKASSVA 207
Query: 728 DFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRF 787
+++E ++ ++ ++P+ + G ++ E +R+ G+D L+ D++ +
Sbjct: 208 AVVRKLEEHGAMEHTIVVAATASDPAAMQFLAPFAGCTMGEYYRDRGEDALIIYDDLTKQ 267
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST---------------KNGTITS 832
A ++S +L R P Y + +L ER + K G++T+
Sbjct: 268 AWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNAKYVEDFTNGEVKGKTGSLTA 327
Query: 833 VQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEE 892
+ I A D++ P+ + D I L + G+ PA++ S S+ + G
Sbjct: 328 LPVIETQAGDVSAFVPTNVISITDGQIFLEADMFNAGVRPAMNAGISVSR-----VGGAA 382
Query: 893 HYKV----ANEVKFYLQKYKEL 910
K+ + ++ L +Y+EL
Sbjct: 383 QAKIIKKLSGGIRTALAQYREL 404
>gi|387825297|ref|YP_005824768.1| ATP synthase subunit alpha [Francisella cf. novicida 3523]
gi|332184763|gb|AEE27017.1| ATP synthase alpha chain [Francisella cf. novicida 3523]
Length = 513
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/396 (58%), Positives = 304/396 (76%), Gaps = 2/396 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++ +G K +CT +I E+PVG LLGR+V++ G ID K + +EKI
Sbjct: 73 AVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEVTTDLTSPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++ L TGIKSIDSM+PIG+GQRELIIGDRQ GKT IA+DTIINQK V
Sbjct: 133 APGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTIINQKGTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S++ N++ +L+ + M++T+VVAATA+DSAA QYI+PY GC++GEYFRD
Sbjct: 193 CIYVAIGQKASTIANIVRQLEEHGAMEHTIVVAATASDSAALQYIAPYAGCSMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N+ ++EK
Sbjct: 253 GQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GD+++F+PTNVISITDGQIFL+T+LFNS RPAIN G
Sbjct: 313 TNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRPAINPGN 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQYRELE+FS+F+SDLD T+ QL G++++ L+K
Sbjct: 373 SVSRVGGAAQTKIIKKLGGGIRLALAQYRELEAFSQFASDLDEATRAQLNRGQRVTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFE 561
QK S+ + + L N + + + ++ FE
Sbjct: 433 QKQFSTLSVALMALSLYAADNGYLDSLEVSEVIPFE 468
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 158/343 (46%), Gaps = 31/343 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ IK TG+ + PVG+ LGR+++ LG+PID KGE+ + SPI
Sbjct: 71 VGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEVTTDLTSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TGIK ID + P +G + + G +GKT ++ I I
Sbjct: 131 KIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTI----INQ 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ +G+++ + +++E ++ ++ ++ + + G S+
Sbjct: 187 KGTGVKCIYVAIGQKASTIANIVRQLEEHGAMEHTIVVAATASDSAALQYIAPYAGCSMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 247 EYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNE 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + G+ P
Sbjct: 307 EYVEKFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKELK 911
AI+P S S+ + G K+ + ++ L +Y+EL+
Sbjct: 367 AINPGNSVSR-----VGGAAQTKIIKKLGGGIRLALAQYRELE 404
>gi|444921826|ref|ZP_21241656.1| ATP synthase subunit alpha [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507099|gb|ELV07281.1| ATP synthase subunit alpha [Wohlfahrtiimonas chitiniclastica SH04]
Length = 515
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/404 (58%), Positives = 305/404 (75%), Gaps = 2/404 (0%)
Query: 169 VLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIA 228
VL+ D +++G CT K+ E+P+G ELLGR+VN+ G+ ID K +EK+A
Sbjct: 74 VLLGDYGKVSEGDVVKCTGKVMEVPIGPELLGRVVNALGQPIDGKGPINTTLTAPIEKVA 133
Query: 229 PGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC 288
PG+++R+SV+EPL TG ++DSMIPIG+GQRELIIGDRQTGKT IAIDTIINQKN V C
Sbjct: 134 PGVIERQSVDEPLQTGYIAVDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKNTGVKC 193
Query: 289 IYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLG 348
IYV IGQK S++ N++ KL+ ++ M +T+VVA++AAD AA QY+S Y GCT+GEYFRD G
Sbjct: 194 IYVAIGQKNSTIANIVRKLEEHDAMAHTIVVASSAADPAAMQYLSAYAGCTMGEYFRDRG 253
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK-- 406
+D LIIYDDL+K A AYRQISLLLRRPPGREAFPGDVFYLHSRLLER++++N ++E
Sbjct: 254 EDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLERAARVNADYVEAFT 313
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
G+LTA PIIET GDV++F+PTNVISITDGQIFL+++LFN+ RPAIN G+S
Sbjct: 314 NGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESDLFNAGVRPAINAGIS 373
Query: 467 VSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMKQ 526
VSRVGGAAQ KI+KKL G +R+ LAQYRELE+FS+F+SDLD T+ QL GE++ LMKQ
Sbjct: 374 VSRVGGAAQTKIIKKLGGGVRLALAQYRELEAFSQFASDLDEATRKQLERGERVMELMKQ 433
Query: 527 KPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRI 570
+ Y++ E+ I+L ++ + I +KQI F +I I
Sbjct: 434 AQYRPYTVSEMAIVLFTVEKGYLDDIEVKQIRPFTEGLITTMNI 477
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 154/340 (45%), Gaps = 25/340 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ + +V TGK + P+G LGR++N LG PID KG IN+ +PI
Sbjct: 71 VGVVLLGDYGKVSEGDVVKCTGKVMEVPIGPELLGRVVNALGQPIDGKGPINTTLTAPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TG +D + P +G + + G GKT ++ I N
Sbjct: 131 KVAPGVIERQSVDEPLQTGYIAVDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKNTG 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ + +++E + + ++ +P+ + A G ++ E F
Sbjct: 191 VKC-IYVAIGQKNSTIANIVRKLEEHDAMAHTIVVASSAADPAAMQYLSAYAGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + +A ++S +L R P + + +L ER +
Sbjct: 250 RDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLERAARVNADYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + G+ PAI+
Sbjct: 310 EAFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESDLFNAGVRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKELK 911
S S+ + G K+ + V+ L +Y+EL+
Sbjct: 370 AGISVSR-----VGGAAQTKIIKKLGGGVRLALAQYRELE 404
>gi|372267003|ref|ZP_09503051.1| F0F1 ATP synthase subunit beta [Alteromonas sp. S89]
Length = 465
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/339 (68%), Positives = 279/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVR IA G++ GI R V +TG P+ PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGIVRAIAMGSSEGISRGLPVKNTGAPVSVPVGTETLGRIMDVLGNPIDECGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I K++S IH P + Q + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEKERSSIHRAAPTYEEQSSSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA EH G SVF GVGER+REGNDFYHEM+E+ V++ KV+++YGQMNEP
Sbjct: 160 ELINNIATEHSGLSVFAGVGERTREGNDFYHEMQEAGVVNVEEFAKSKVAMVYGQMNEPP 219
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 220 GNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 279
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA GIYPA
Sbjct: 280 EMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPA 339
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP ++GEEHY VA V+ LQ+YKELKD
Sbjct: 340 VDPLDSTSRQLDPQVIGEEHYSVARGVQSVLQRYKELKD 378
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 149/343 (43%), Gaps = 30/343 (8%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + + +++G T +PVG E LGRI++ G ID K R ++ +
Sbjct: 52 AIAMGSSEGISRGLPVKNTGAPVSVPVGTETLGRIMDVLGNPIDECGPIGEKERSSIHRA 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV- 286
AP ++ S E L TGIK ID + P KG + + G GKT ++ I N ++
Sbjct: 112 APTYEEQSSSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIATEHSG 171
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISP-------YTGCT 339
+ ++ +G++ + ++++ ++ + A + P TG T
Sbjct: 172 LSVFAGVGERTREGNDFYHEMQEAGVVNVEEFAKSKVAMVYGQMNEPPGNRLRVALTGLT 231
Query: 340 IGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKI 399
+ E FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 232 MAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL 284
Query: 400 NKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRP 459
+++I + G++T+ + D+T P + D + L ++ P
Sbjct: 285 ------QERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYP 338
Query: 460 AINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
A++ S SR V G Y + + ++ +L +Y+EL+
Sbjct: 339 AVDPLDSTSRQLDPQVIGEEHYSVARG----VQSVLQRYKELK 377
>gi|262273112|ref|ZP_06050929.1| ATP synthase beta chain [Grimontia hollisae CIP 101886]
gi|262222868|gb|EEY74176.1| ATP synthase beta chain [Grimontia hollisae CIP 101886]
Length = 467
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 237/368 (64%), Positives = 297/368 (80%), Gaps = 9/368 (2%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + ++ + + +N+K + +VQQQ+G IVRTIA G+++G++R V +T
Sbjct: 13 VVDVEFPQESVPQVYDALNVKREGERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLEVENT 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
GKPI PVG TLGRI+NVLGD ID +G+I K++ IH P + +Q +LETG+K
Sbjct: 73 GKPIEVPVGVETLGRIMNVLGDAIDERGDIGEKERYSIHREAPSYEDQSNATELLETGVK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
VIDL+CPF KGGKIGLFGGAGVGKTVNMMELI NIA++H G SVF GVGER+REGNDFY+
Sbjct: 133 VIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYY 192
Query: 732 EMKESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNI 784
EM+E+ V++ KV+++YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNI
Sbjct: 193 EMQEAGVVNVENPAESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNI 252
Query: 785 YRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLT 844
YR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLT
Sbjct: 253 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLT 312
Query: 845 DPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYL 904
DPSP+TTF HLD+T+VLSR IA LG+YPAIDPL+S S+QLDP ++G+EHY VA V+ L
Sbjct: 313 DPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPLVIGQEHYDVARGVQSVL 372
Query: 905 QKYKELKD 912
Q+YKELKD
Sbjct: 373 QRYKELKD 380
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 148/342 (43%), Gaps = 40/342 (11%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T K E+PVG E LGRI+N G+ ID + K R ++ + AP D+
Sbjct: 62 GLRRGLEVENTGKPIEVPVGVETLGRIMNVLGDAIDERGDIGEKERYSIHREAPSYEDQS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TG+K ID + P KG + + G GKT ++ I N + + ++ +G
Sbjct: 122 NATELLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGE 342
++ + YY + VV A+S Q P TG T+ E
Sbjct: 182 ERTREGNDF-----YYEMQEAGVVNVENPAESKVAMVYGQMNEPPGNRLRVALTGLTMAE 236
Query: 343 YFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKY 402
FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 237 KFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL--- 286
Query: 403 FLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAIN 462
+++I + G++T+ + D+T P + D + L N+ PAI+
Sbjct: 287 ---QERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAID 343
Query: 463 VGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESF 499
S SR V G Y + + ++ +L +Y+EL+
Sbjct: 344 PLDSTSRQLDPLVIGQEHYDVARG----VQSVLQRYKELKDI 381
>gi|300313646|ref|YP_003777738.1| F0F1-type ATP synthase subunit beta [Herbaspirillum seropedicae
SmR1]
gi|409408151|ref|ZP_11256595.1| F0F1-type ATP synthase subunit beta [Herbaspirillum sp. GW103]
gi|124483594|emb|CAM32670.1| F0F1-type ATP synthase, beta subunit protein [Herbaspirillum
seropedicae]
gi|300076431|gb|ADJ65830.1| F0F1-type ATP synthase, beta subunit protein [Herbaspirillum
seropedicae SmR1]
gi|386432607|gb|EIJ45434.1| F0F1-type ATP synthase subunit beta [Herbaspirillum sp. GW103]
Length = 466
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/366 (63%), Positives = 290/366 (79%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + K + + L+ + +VQQQ+G+ +VRTIA G+++G++R + +TGK
Sbjct: 13 VVDVEFPRDAMPKVYDALKLEGSDLTLEVQQQLGDGVVRTIALGSSDGLRRGLTISNTGK 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG+PID G ++ ++ + IH P + + +LETGIKVI
Sbjct: 73 PITVPVGTATLGRIMDVLGNPIDECGPVSHEQTASIHRKAPAYDELSPSQELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
E+ V+D KV+++YGQMNEP GNRLRVALTGL+IAE FR+ GKDVL F+DNIYR
Sbjct: 193 AEAKVVDLENPTNSKVAMVYGQMNEPPGNRLRVALTGLTIAEGFRDEGKDVLFFVDNIYR 252
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 253 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKTGSITSIQAVYVPADDLTDP 312
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLDST+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY+ A V+ LQ+
Sbjct: 313 SPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGQEHYETARAVQGTLQR 372
Query: 907 YKELKD 912
YKEL+D
Sbjct: 373 YKELRD 378
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 136/334 (40%), Gaps = 30/334 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID + ++ + AP +
Sbjct: 60 GLRRGLTISNTGKPITVPVGTATLGRIMDVLGNPIDECGPVSHEQTASIHRKAPAYDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 PSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
++ + +++ +D +V + + TG TI E FRD
Sbjct: 180 ERTREGNDFYHEMAEAKVVDLENPTNSKVAMVYGQMNEPPGNRLRVALTGLTIAEGFRDE 239
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 GKDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------ 287
Query: 408 KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSV 467
I + G++T+ + D+T P + D + L ++ + PA++ S
Sbjct: 288 -ITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDST 346
Query: 468 SR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
SR V G Y+ + + G L +Y+EL
Sbjct: 347 SRQLDPQVVGQEHYETARAVQG----TLQRYKEL 376
>gi|34500024|gb|AAQ73594.1| ATP synthase beta subunit [Bisgaard Taxon 14]
Length = 445
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/357 (66%), Positives = 290/357 (81%), Gaps = 2/357 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISIN-KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPI 615
+E + ++ K + + ++ + + +VQQQ+G +VR IA G+ +G+KRN V D G PI
Sbjct: 16 VEFPQDSVPKVYDALKVEGDNGLTLEVQQQLGGGVVRCIAMGSXDGLKRNLKVDDLGHPI 75
Query: 616 LTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDL 675
PVG TLGRI+NVLG+PID G I +++ IH P + Q + +LETGIKVIDL
Sbjct: 76 SVPVGVKTLGRIMNVLGEPIDELGPIGEEERWSIHRERPSYEEQSNSTELLETGIKVIDL 135
Query: 676 LCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKE 735
+CPF K GK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM+E
Sbjct: 136 VCPFAKRGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMQE 195
Query: 736 SNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVS 795
SNVLDKVSL+YGQMNEP GNRLRV TGL+IAE+FR+ G+DVL F+DNIYR+TLAGTEVS
Sbjct: 196 SNVLDKVSLVYGQMNEPPGNRLRVR-TGLTIAEKFRDEGRDVLFFVDNIYRYTLAGTEVS 254
Query: 796 AMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHL 855
A+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HL
Sbjct: 255 ALLGRMPSAVGYQPTLAEEMGVLQERITSTKKGSITSIQAVYVPADDLTDPSPATTFAHL 314
Query: 856 DSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
D+T+VLSRQIA LGIYPA+DP +S S+Q DP +VG+EHY+VA V+ LQ+YK+LKD
Sbjct: 315 DATVVLSRQIASLGIYPAVDPFDSTSRQFDPLVVGKEHYEVARGVQSTLQRYKDLKD 371
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 137/312 (43%), Gaps = 24/312 (7%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG + LGRI+N GE ID + R ++ + P ++ + E L TGIK ID +
Sbjct: 77 VPVGVKTLGRIMNVLGEPIDELGPIGEEERWSIHRERPSYEEQSNSTELLETGIKVIDLV 136
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P K + + G GKT ++ I N + ++ +G++ + ++++
Sbjct: 137 CPFAKRGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMQES 196
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
N +D +V + + + TG TI E FRD G+D L D++ ++ A ++S
Sbjct: 197 NVLDKVSLVYGQMNEPPGNR-LRVRTGLTIAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 255
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P + L E + +++I + G++T+ + D+
Sbjct: 256 LLGRMPSAVGY-------QPTLAEEMGVL------QERITSTKKGSITSIQAVYVPADDL 302
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGD 485
T P + D + L + + PA++ S SR V G Y++ +
Sbjct: 303 TDPSPATTFAHLDATVVLSRQIASLGIYPAVDPFDSTSRQFDPLVVGKEHYEVARG---- 358
Query: 486 IRIMLAQYRELE 497
++ L +Y++L+
Sbjct: 359 VQSTLQRYKDLK 370
>gi|389776195|ref|ZP_10193783.1| F0F1 ATP synthase subunit beta [Rhodanobacter spathiphylli B39]
gi|388436867|gb|EIL93704.1| F0F1 ATP synthase subunit beta [Rhodanobacter spathiphylli B39]
Length = 470
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/338 (69%), Positives = 275/338 (81%), Gaps = 6/338 (1%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+T G+KR +TG+ I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIALGSTEGLKRGLQARNTGEGIKVPVGKATLGRIMDVLGNPIDEAGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + + IH P + Q ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEQDQWVIHREAPSYDEQAAATDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFYHEMK+SNVLDKV+++YGQMNEP GNRLRVA
Sbjct: 160 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVA 219
Query: 761 LTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
LTGL++AE FR+ GKDVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEE
Sbjct: 220 LTGLTMAEYFRDEKDASGKGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEE 279
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG LQERI+STK G+ITS+QA+YVPADD TDPSP+TTF HLDST+ LSR IA LGIYPA+
Sbjct: 280 MGVLQERITSTKTGSITSIQAVYVPADDYTDPSPATTFVHLDSTVALSRDIASLGIYPAV 339
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPL S S+QLDP ++GEEHY VA V+ LQ+YKELKD
Sbjct: 340 DPLASTSRQLDPLVIGEEHYNVARRVQGTLQRYKELKD 377
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 148/335 (44%), Gaps = 29/335 (8%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G + T + ++PVG LGRI++ G ID +++ + + AP ++
Sbjct: 59 EGLKRGLQARNTGEGIKVPVGKATLGRIMDVLGNPIDEAGPIGEQDQWVIHREAPSYDEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ + L TGIK ID + P KG + + G GKT ++ I N K + + ++ +
Sbjct: 119 AAATDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD------L 347
G++ + +++K N +D +V + + TG T+ EYFRD
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGK 238
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D L+ D++ ++ A ++S LL R P V Y L E + ++
Sbjct: 239 GKDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QE 285
Query: 408 KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSV 467
+I + G++T+ + D T P D + L ++ + PA++ S
Sbjct: 286 RITSTKTGSITSIQAVYVPADDYTDPSPATTFVHLDSTVALSRDIASLGIYPAVDPLAST 345
Query: 468 SR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y + +++ G L +Y+EL+
Sbjct: 346 SRQLDPLVIGEEHYNVARRVQG----TLQRYKELK 376
>gi|416233528|ref|ZP_11629357.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis 12P80B1]
gi|416254029|ref|ZP_11638486.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis O35E]
gi|326566567|gb|EGE16713.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis 12P80B1]
gi|326577726|gb|EGE27602.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis O35E]
Length = 514
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/404 (57%), Positives = 306/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +L +GQK +CT +I E+PVG ELLGR+V++ G ID K K + VEKI
Sbjct: 74 AVVLGEYLSLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDGKGPINAKLTDKVEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV+EP++TG K++D+MIPIG+GQRELIIGDRQTGKT +AID II QKN +
Sbjct: 134 APGVIARQSVDEPVMTGYKAVDTMIPIGRGQRELIIGDRQTGKTALAIDAIIAQKNSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ + YT VV A+A++ AA QYI+PY+GCT+GEYFRD
Sbjct: 194 CVYVAIGQKRSTIANVVRKLEETGALAYTTVVVASASEPAALQYIAPYSGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++E
Sbjct: 254 GEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNADYVEAF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL++NLFNS RPA+N G+
Sbjct: 314 TNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESNLFNSGIRPAVNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKLSG IR LAQYREL +F++F+SDLD TK QL +G +++ LMK
Sbjct: 374 SVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFAQFASDLDDATKQQLEHGVRVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK + SI + ++ + +P+++I FE ++Y R
Sbjct: 434 QKQYAPMSIADQAAVIYASNEGYLSDVPVEKIGAFEEAFLRYLR 477
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 150/320 (46%), Gaps = 27/320 (8%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + PVG LGR+++ LG+PID KG IN+K + + P + + + TG
Sbjct: 92 TGRILEVPVGPELLGRVVDALGNPIDGKGPINAKLTDKVEKIAPGVIARQSVDEPVMTGY 151
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCS-VFIGVGERSREGNDF 729
K +D + P +G + + G GKT ++ I IA ++ G V++ +G++ +
Sbjct: 152 KAVDTMIPIGRGQRELIIGDRQTGKTALAIDAI--IAQKNSGIKCVYVAIGQKRSTIANV 209
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
+++E+ L +++ +EP+ + +G ++ E FR+ G+D L+ D++ + +
Sbjct: 210 VRKLEETGALAYTTVVVASASEPAALQYIAPYSGCTMGEYFRDRGEDALIVYDDLSKQAV 269
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST---------------KNGTITSVQ 834
A ++S +L R P Y + +L ER S K G++T++
Sbjct: 270 AYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNADYVEAFTNGEVKGKTGSLTALP 329
Query: 835 AIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHY 894
I A D++ P+ + D I L + GI PA++ S S+ + G
Sbjct: 330 IIETQAGDVSAFVPTNVISITDGQIFLESNLFNSGIRPAVNAGISVSR-----VGGAAQT 384
Query: 895 KV----ANEVKFYLQKYKEL 910
K+ + ++ L +Y+EL
Sbjct: 385 KIIKKLSGGIRTALAQYREL 404
>gi|120609075|ref|YP_968753.1| F0F1 ATP synthase subunit beta [Acidovorax citrulli AAC00-1]
gi|326315260|ref|YP_004232932.1| ATP synthase subunit beta [Acidovorax avenae subsp. avenae ATCC
19860]
gi|190358284|sp|A1TJ41.1|ATPB_ACIAC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|120587539|gb|ABM30979.1| ATP synthase F1 subcomplex beta subunit [Acidovorax citrulli
AAC00-1]
gi|323372096|gb|ADX44365.1| ATP synthase subunit beta [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 476
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/363 (63%), Positives = 289/363 (79%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K + + L+ + +VQQQ+G+ +VRTIA G+++G++R +V +TG PI
Sbjct: 26 VEFPRDQMPKVYDALKLEGSPLTLEVQQQLGDGVVRTIALGSSDGLRRGLMVSNTGNPIT 85
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID +G ++ + + IH P + + +LETGIKVIDL+
Sbjct: 86 VPVGKATLGRIMDVLGSPIDERGPVSQELTASIHRKAPAYDELSPSQELLETGIKVIDLV 145
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM +S
Sbjct: 146 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADS 205
Query: 737 NVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
V++ KV+++YGQMNEP GNRLRVALTGL+IAE FR+ G+DVL F+DNIYR+TL
Sbjct: 206 GVVNLEKLEDSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTL 265
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+
Sbjct: 266 AGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDPSPA 325
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLDST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY+VA V+ LQ+YKE
Sbjct: 326 TTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGEEHYQVARGVQGTLQRYKE 385
Query: 910 LKD 912
L+D
Sbjct: 386 LRD 388
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 133/323 (41%), Gaps = 40/323 (12%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + + ++ + AP + E L TGIK ID +
Sbjct: 86 VPVGKATLGRIMDVLGSPIDERGPVSQELTASIHRKAPAYDELSPSQELLETGIKVIDLV 145
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K + + ++ +G++ + Y+
Sbjct: 146 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDF-----YH 200
Query: 311 NCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGEYFRDLGQDCLIIYDDL 358
D VV DS Q P TG TI E FRD G+D L D++
Sbjct: 201 EMADSGVVNLEKLEDSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNI 260
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P + + RL ER I + G++T
Sbjct: 261 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKVGSIT 307
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L ++ + PA++ S SR V G
Sbjct: 308 SIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGE 367
Query: 474 AQYKIVKKLSGDIRIMLAQYREL 496
Y++ + + G L +Y+EL
Sbjct: 368 EHYQVARGVQG----TLQRYKEL 386
>gi|89898927|ref|YP_521398.1| F0F1 ATP synthase subunit beta [Rhodoferax ferrireducens T118]
gi|118573732|sp|Q223D6.1|ATPB1_RHOFD RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
synthase F1 sector subunit beta 1; AltName:
Full=F-ATPase subunit beta 1
gi|89343664|gb|ABD67867.1| ATP synthase F1, beta subunit [Rhodoferax ferrireducens T118]
Length = 474
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/366 (63%), Positives = 291/366 (79%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + K + + L+ + +VQQQ+G+ IVRTIA G+++G++R +V +T
Sbjct: 22 VVDVEFPRDQMPKIYDALKLEGSALTLEVQQQLGDGIVRTIALGSSDGLRRGLMVSNTAN 81
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI+ PVG TLGRI++VLG PID +G ++++K + IH P + + +LETGIKVI
Sbjct: 82 PIMVPVGTATLGRIMDVLGTPIDERGPVSTEKYASIHRKAPTYDELSPSQELLETGIKVI 141
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 142 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 201
Query: 734 KESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
+S V++ KV+++YGQMNEP GNRLRVALTGL+IAE FR+ GKDVL F+DNIYR
Sbjct: 202 ADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGKDVLFFVDNIYR 261
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
FTLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 262 FTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDP 321
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLDST+VLSR IA LGIYPA+DPL+S S+QLDP +VG++HY+ A V+ LQ+
Sbjct: 322 SPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGQDHYETARAVQGTLQR 381
Query: 907 YKELKD 912
YKEL+D
Sbjct: 382 YKELRD 387
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 132/323 (40%), Gaps = 40/323 (12%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + + ++ + AP + E L TGIK ID +
Sbjct: 85 VPVGTATLGRIMDVLGTPIDERGPVSTEKYASIHRKAPTYDELSPSQELLETGIKVIDLV 144
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKI------------S 298
P KG + + G GKT ++ I N K + + ++ +G++ S
Sbjct: 145 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADS 204
Query: 299 SLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDL 358
++N+ N + M Y + + TG TI E FRD G+D L D++
Sbjct: 205 GVVNLENLGESKVAMVY-----GQMNEPPGNRLRVALTGLTIAESFRDEGKDVLFFVDNI 259
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
+ A ++S LL R P + + RL ER I + G++T
Sbjct: 260 YRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKVGSIT 306
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L ++ + PA++ S SR V G
Sbjct: 307 SIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGQ 366
Query: 474 AQYKIVKKLSGDIRIMLAQYREL 496
Y+ + + G L +Y+EL
Sbjct: 367 DHYETARAVQG----TLQRYKEL 385
>gi|296112607|ref|YP_003626545.1| ATP synthase F1 alpha subunit [Moraxella catarrhalis RH4]
gi|416155978|ref|ZP_11604271.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis 101P30B1]
gi|416217016|ref|ZP_11623965.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis 7169]
gi|416220316|ref|ZP_11625408.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis 103P14B1]
gi|416228560|ref|ZP_11627714.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis 46P47B1]
gi|416237229|ref|ZP_11630746.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis BC1]
gi|416247173|ref|ZP_11635479.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis BC8]
gi|416249970|ref|ZP_11636979.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis CO72]
gi|421779428|ref|ZP_16215920.1| ATP synthase F1 alpha subunit [Moraxella catarrhalis RH4]
gi|295920301|gb|ADG60652.1| ATP synthase F1 alpha subunit [Moraxella catarrhalis BBH18]
gi|326560867|gb|EGE11232.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis 7169]
gi|326563895|gb|EGE14146.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis 46P47B1]
gi|326566904|gb|EGE17043.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis 103P14B1]
gi|326569766|gb|EGE19816.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis BC8]
gi|326570797|gb|EGE20822.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis BC1]
gi|326575093|gb|EGE25021.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis CO72]
gi|326576821|gb|EGE26728.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis 101P30B1]
gi|407813138|gb|EKF83920.1| ATP synthase F1 alpha subunit [Moraxella catarrhalis RH4]
Length = 514
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/404 (57%), Positives = 306/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +L +GQK +CT +I E+PVG ELLGR+V++ G ID K K + VEKI
Sbjct: 74 AVVLGEYLSLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDGKGPINAKLTDKVEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV+EP++TG K++D+MIPIG+GQRELIIGDRQTGKT +AID II QKN +
Sbjct: 134 APGVIARQSVDEPVMTGYKAVDTMIPIGRGQRELIIGDRQTGKTALAIDAIIAQKNSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ + YT VV A+A++ AA QYI+PY+GCT+GEYFRD
Sbjct: 194 CVYVAIGQKRSTIANVVRKLEETGALAYTTVVVASASEPAALQYIAPYSGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++E
Sbjct: 254 GEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNADYVEAF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL++NLFNS RPA+N G+
Sbjct: 314 TNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESNLFNSGIRPAVNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKLSG IR LAQYREL +F++F+SDLD TK QL +G +++ LMK
Sbjct: 374 SVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFAQFASDLDDATKQQLEHGVRVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK + SI + ++ + +P+++I FE ++Y R
Sbjct: 434 QKQYAPMSIADQAAVIYASNEGYLSDVPVEKIGAFEEAFLRYLR 477
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 150/320 (46%), Gaps = 27/320 (8%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + PVG LGR+++ LG+PID KG IN+K + + P + + + TG
Sbjct: 92 TGRILEVPVGPELLGRVVDALGNPIDGKGPINAKLTDKVEKIAPGVIARQSVDEPVMTGY 151
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCS-VFIGVGERSREGNDF 729
K +D + P +G + + G GKT ++ I IA ++ G V++ +G++ +
Sbjct: 152 KAVDTMIPIGRGQRELIIGDRQTGKTALAIDAI--IAQKNSGIKCVYVAIGQKRSTIANV 209
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
+++E+ L +++ +EP+ + +G ++ E FR+ G+D L+ D++ + +
Sbjct: 210 VRKLEETGALAYTTVVVASASEPAALQYIAPYSGCTMGEYFRDRGEDALIVYDDLSKQAV 269
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST---------------KNGTITSVQ 834
A ++S +L R P Y + +L ER S K G++T++
Sbjct: 270 AYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNADYVEAFTNGEVKGKTGSLTALP 329
Query: 835 AIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHY 894
I A D++ P+ + D I L + GI PA++ S S+ + G
Sbjct: 330 IIETQAGDVSAFVPTNVISITDGQIFLESNLFNSGIRPAVNAGISVSR-----VGGAAQT 384
Query: 895 KV----ANEVKFYLQKYKEL 910
K+ + ++ L +Y+EL
Sbjct: 385 KIIKKLSGGIRTALAQYREL 404
>gi|378821596|ref|ZP_09844476.1| ATP synthase F1, beta subunit [Sutterella parvirubra YIT 11816]
gi|378599541|gb|EHY32549.1| ATP synthase F1, beta subunit [Sutterella parvirubra YIT 11816]
Length = 467
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/332 (69%), Positives = 279/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G++ G++R V TGK I PVG TLGRI++VLG PID+ GE
Sbjct: 48 EVQQQLGDGIVRTIAMGSSEGLQRGMKVTSTGKGISVPVGPKTLGRIMDVLGRPIDDAGE 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++ IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IGEDERREIHREAPKFDELSPSVDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA ++ G SVF GVGER+REGNDFYHEM ES VLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQYGGYSVFAGVGERTREGNDFYHEMGESKVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+LLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LTGLTMAEAFRDEGRDILLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RIASTKTGSITSIQAVYVPADDLTDPSPATTFGHLDATVVLSRDIAALGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP I+GEEHY A V+ LQ+YKEL+D
Sbjct: 348 SRQVDPNIIGEEHYTTARRVQETLQRYKELRD 379
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 140/328 (42%), Gaps = 23/328 (7%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G K T K +PVG + LGRI++ G ID+ + R + + AP +
Sbjct: 67 EGLQRGMKVTSTGKGISVPVGPKTLGRIMDVLGRPIDDAGEIGEDERREIHREAPKFDEL 126
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ L TGIK ID + P KG + + G GKT ++ I N K ++ +
Sbjct: 127 SPSVDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQYGGYSVFAGV 186
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ +D +V + + TG T+ E FRD G+D L+
Sbjct: 187 GERTREGNDFYHEMGESKVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEAFRDEGRDILL 246
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 247 FVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERIASTK 293
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 294 TGSITSIQAVYVPADDLTDPSPATTFGHLDATVVLSRDIAALGIYPAVDPLDSTSRQVDP 353
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYREL 496
+ G Y ++ ++ L +Y+EL
Sbjct: 354 NIIGEEHYTTARR----VQETLQRYKEL 377
>gi|110835589|ref|YP_694448.1| ATP synthase subunit alpha [Alcanivorax borkumensis SK2]
gi|118573472|sp|Q0VKX2.1|ATPA_ALCBS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|110648700|emb|CAL18176.1| ATP synthase, alpha subunit [Alcanivorax borkumensis SK2]
Length = 514
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 228/403 (56%), Positives = 305/403 (75%), Gaps = 2/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D L +GQK CT +I E+P G E+LGR+V++ G ID K K + VEK+
Sbjct: 74 AVVLGDYLGLAEGQKVRCTGRILEVPTGPEMLGRVVDALGNPIDGKGPIEAKQTDAVEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R VNEP+ TG KSID+M+PIG+GQRELIIGDRQ GKT +A+D IINQK+ +
Sbjct: 134 APGVIWRREVNEPVQTGYKSIDAMVPIGRGQRELIIGDRQIGKTAVAVDAIINQKDSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ + M+ T++VAA+A+D A+ Q+++P+ GCT+GEYFRD
Sbjct: 194 CVYVAIGQKQSTIANVVRKLEEHGAMENTIIVAASASDPASMQFLAPFAGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++K+N+ ++EK
Sbjct: 254 GEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKVNEDYVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPA+N G+
Sbjct: 314 TNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAMNAGV 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KIVKKL G IR+ LAQYREL +F++F+SDLD T+ QL +G+ ++ LMK
Sbjct: 374 SVSRVGGAAQTKIVKKLGGGIRLALAQYRELAAFAQFASDLDDSTREQLEHGQAVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
QK + S+ E+ ++L + + +++I FE ++ Y
Sbjct: 434 QKQYSPMSVAEMGVVLYAANEGYLKGMEVEKIGAFEAALLDYM 476
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 153/342 (44%), Gaps = 25/342 (7%)
Query: 588 ENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKS 647
++ V + G+ G+ V TG+ + P G LGR+++ LG+PID KG I +K+
Sbjct: 69 QDSVGAVVLGDYLGLAEGQKVRCTGRILEVPTGPEMLGRVVDALGNPIDGKGPIEAKQTD 128
Query: 648 PIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIA 707
+ + P + N ++TG K ID + P +G + + G +GKT ++ I N
Sbjct: 129 AVEKVAPGVIWRREVNEPVQTGYKSIDAMVPIGRGQRELIIGDRQIGKTAVAVDAIINQK 188
Query: 708 IEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
C V++ +G++ + +++E ++ ++ ++P+ + G ++
Sbjct: 189 DSGIKC-VYVAIGQKQSTIANVVRKLEEHGAMENTIIVAASASDPASMQFLAPFAGCTMG 247
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 248 EYFRDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKVNE 307
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I D++ P+ + D I L + GI P
Sbjct: 308 DYVEKFTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETDLFNSGIRP 367
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
A++ S S+ + G K+ + ++ L +Y+EL
Sbjct: 368 AMNAGVSVSR-----VGGAAQTKIVKKLGGGIRLALAQYREL 404
>gi|399908089|ref|ZP_10776641.1| ATP synthase F1 subunit alpha [Halomonas sp. KM-1]
Length = 514
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 231/404 (57%), Positives = 304/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D L +G CT +I E+PVG EL+GR+V+ G ID K K + VEK+
Sbjct: 74 AVVLGDYLKLEEGMTASCTGRILEVPVGPELVGRVVDPLGNPIDGKGDVGAKLTDAVEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+K+ID+M+PIG+GQRELIIGDRQ GK+ IA+D IINQK K VI
Sbjct: 134 APGVITRQSVDQPIQTGLKAIDAMVPIGRGQRELIIGDRQIGKSAIAVDAIINQKGKGVI 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S++ NV+ KL+ + MD+T+VVA+ AAD A Q+++PY GCT+GEYFRD
Sbjct: 194 CIYVAIGQKQSTIANVVRKLEEHGAMDHTIVVASGAADPAPMQFLAPYAGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LI+YDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 254 GQDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+ FN+ RPAIN GL
Sbjct: 314 TNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETDQFNAGIRPAINAGL 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G +R+ LAQYREL +FS+F+SDLD T+ QL +G++++ LMK
Sbjct: 374 SVSRVGGAAQTKIIKKLGGGVRLALAQYRELAAFSQFASDLDEATRKQLEHGQRVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK + S+ E+ + L F + + ++ FE + +Y R
Sbjct: 434 QKQYSPLSVAEMGVSLYAANEGFLDDVDVSKVLDFERALHEYMR 477
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 145/322 (45%), Gaps = 31/322 (9%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + PVG +GR+++ LG+PID KG++ +K + + P + + ++TG+
Sbjct: 92 TGRILEVPVGPELVGRVVDPLGNPIDGKGDVGAKLTDAVEKVAPGVITRQSVDQPIQTGL 151
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSV---FIGVGERSREGN 727
K ID + P +G + + G +GK+ ++ I I KG V ++ +G++
Sbjct: 152 KAIDAMVPIGRGQRELIIGDRQIGKSAIAVDAI----INQKGKGVICIYVAIGQKQSTIA 207
Query: 728 DFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRF 787
+ +++E +D ++ +P+ + G ++ E FR+ G+D L+ D++ +
Sbjct: 208 NVVRKLEEHGAMDHTIVVASGAADPAPMQFLAPYAGCTMGEYFRDRGQDALIVYDDLTKQ 267
Query: 788 TLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST---------------KNGTITS 832
A +VS +L R P Y + +L ER + K G++T+
Sbjct: 268 AWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEKFTNGEVKGKTGSLTA 327
Query: 833 VQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEE 892
+ I D++ P+ + D I L GI PAI+ S S+ + G
Sbjct: 328 LPIIETQGGDVSAFVPTNVISITDGQIFLETDQFNAGIRPAINAGLSVSR-----VGGAA 382
Query: 893 HYKVANE----VKFYLQKYKEL 910
K+ + V+ L +Y+EL
Sbjct: 383 QTKIIKKLGGGVRLALAQYREL 404
>gi|339053306|ref|ZP_08648044.1| ATP synthase beta chain [gamma proteobacterium IMCC2047]
gi|330721486|gb|EGG99532.1| ATP synthase beta chain [gamma proteobacterium IMCC2047]
Length = 464
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 231/339 (68%), Positives = 280/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VR IA G++ G+ R V +TG P+ PVG+ TLGRI++VLG+PID GE
Sbjct: 40 EVQQQLGDGVVRAIAMGSSEGVSRGLEVANTGAPVSVPVGEETLGRIMDVLGNPIDECGE 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ PIH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEQERMPIHRKAPTYEELAASEELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA EH G SVF GVGER+REGNDFYHEM+E+ V++ KV+++YGQMNEP
Sbjct: 160 ELINNIATEHSGLSVFAGVGERTREGNDFYHEMQEAGVVNVENFKESKVAMVYGQMNEPP 219
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE+FR+ GKDVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 220 GNRLRVALTGLTMAEKFRDDGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 279
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA GIYPA
Sbjct: 280 EMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASKGIYPA 339
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP I+G EHY+VA V+ LQ+YKELKD
Sbjct: 340 VDPLDSTSRQLDPLIIGTEHYEVARGVQGVLQRYKELKD 378
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 151/343 (44%), Gaps = 30/343 (8%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + + +++G + T +PVG E LGRI++ G ID + + R + +
Sbjct: 52 AIAMGSSEGVSRGLEVANTGAPVSVPVGEETLGRIMDVLGNPIDECGEIGEQERMPIHRK 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV- 286
AP + + E L TGIK ID + P KG + + G GKT ++ I N ++
Sbjct: 112 APTYEELAASEELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIATEHSG 171
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCT 339
+ ++ +G++ + ++++ ++ +V + + TG T
Sbjct: 172 LSVFAGVGERTREGNDFYHEMQEAGVVNVENFKESKVAMVYGQMNEPPGNRLRVALTGLT 231
Query: 340 IGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKI 399
+ E FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 232 MAEKFRDDGKDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL 284
Query: 400 NKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRP 459
+++I + G++T+ + D+T P + D + L ++ + P
Sbjct: 285 ------QERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASKGIYP 338
Query: 460 AINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
A++ S SR + G Y++ + + G +L +Y+EL+
Sbjct: 339 AVDPLDSTSRQLDPLIIGTEHYEVARGVQG----VLQRYKELK 377
>gi|226941916|ref|YP_002796990.1| AtpA [Laribacter hongkongensis HLHK9]
gi|254808102|sp|C1D5G4.1|ATPA_LARHH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|226716843|gb|ACO75981.1| AtpA [Laribacter hongkongensis HLHK9]
Length = 514
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 231/411 (56%), Positives = 311/411 (75%), Gaps = 7/411 (1%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++++G + CT +I E+PVG EL+GR+VN+ G+ ID K K VEK+
Sbjct: 73 AVVLGEYEHISEGDEVKCTGRILEVPVGPELVGRVVNALGQPIDGKGPIQAKASSPVEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++PL TG+K ID+MIPIG+GQRELIIGDRQTGKT +A+D IINQK VI
Sbjct: 133 APGVIARKSVDQPLQTGLKGIDAMIPIGRGQRELIIGDRQTGKTAVALDAIINQKGSGVI 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ NV+ KL+ + MD+T++VAA+A+++AA QYI+PY+GC +GEYFRD
Sbjct: 193 CIYVAIGQKASSIANVVRKLEEHGAMDHTIIVAASASETAALQYIAPYSGCAMGEYFRDT 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 253 GRDSLIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNAEYVEKL 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPA+N G+
Sbjct: 313 TNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAVNAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ ++KKL G IR+ LAQYREL +F++F+SDLD T+ QL +GE ++ LMK
Sbjct: 373 SVSRVGGAAQTNVIKKLGGGIRLALAQYRELAAFAQFASDLDEATRKQLSHGEIVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIINLKNN 576
QK + E+ + L + ++ IP+K FE + + N+K N
Sbjct: 433 QKQFSTLKVSEMAMTLYGVTKGYYEGIPVKTALKFESDFLS-----NIKAN 478
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 154/342 (45%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I V TG+ + PVG +GR++N LG PID KG I +K SP+
Sbjct: 71 VGAVVLGEYEHISEGDEVKCTGRILEVPVGPELVGRVVNALGQPIDGKGPIQAKASSPVE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TG+K ID + P +G + + G GKT ++ I I
Sbjct: 131 KVAPGVIARKSVDQPLQTGLKGIDAMIPIGRGQRELIIGDRQTGKTAVALDAI----INQ 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ +G+++ + +++E +D ++ +E + + +G ++
Sbjct: 187 KGSGVICIYVAIGQKASSIANVVRKLEEHGAMDHTIIVAASASETAALQYIAPYSGCAMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR++G+D L+ D++ + +A ++S +L R P Y + +L ER +
Sbjct: 247 EYFRDTGRDSLIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNA 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
+ G++T++ I A D++ P+ + D I L + GI P
Sbjct: 307 EYVEKLTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHY----KVANEVKFYLQKYKEL 910
A++ S S+ + G K+ ++ L +Y+EL
Sbjct: 367 AVNAGISVSR-----VGGAAQTNVIKKLGGGIRLALAQYREL 403
>gi|348617862|ref|ZP_08884396.1| ATP synthase subunit beta (ATPase subunit beta) (ATP synthase F1
sector subunit beta) [Candidatus Glomeribacter
gigasporarum BEG34]
gi|347816806|emb|CCD29046.1| ATP synthase subunit beta (ATPase subunit beta) (ATP synthase F1
sector subunit beta) [Candidatus Glomeribacter
gigasporarum BEG34]
Length = 467
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 231/347 (66%), Positives = 279/347 (80%)
Query: 566 KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLG 625
K + + L+ + + +VQQQ+G+ +VR I G+ G++R V + G PI PVG TLG
Sbjct: 29 KIYDALILEGSDLVLEVQQQLGDGVVRAICLGSAEGLRRGLTVKNMGAPIQVPVGAPTLG 88
Query: 626 RILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKI 685
RI++VLG PID G I++ ++ IH PKF +LETGIKVIDL+CPF KGGK+
Sbjct: 89 RIMDVLGRPIDEAGAIDAAQQRSIHQPAPKFDELSPATELLETGIKVIDLICPFAKGGKV 148
Query: 686 GLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLI 745
GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEMK SNVLDKV+L+
Sbjct: 149 GLFGGAGVGKTVNMMELINNIAKAHGGYSVFAGVGERTREGNDFYHEMKASNVLDKVALV 208
Query: 746 YGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAV 805
YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYRFTLAGTEVSA+LGR PSAV
Sbjct: 209 YGQMNEPPGNRLRVALTGLTMAEHFRDEGRDVLFFVDNIYRFTLAGTEVSALLGRMPSAV 268
Query: 806 GYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQI 865
GYQPTLAEEMG+LQERI+STK G+ITSVQAIYVPADDLTDPSP+TTF HLD+T+VLSR I
Sbjct: 269 GYQPTLAEEMGRLQERIASTKGGSITSVQAIYVPADDLTDPSPATTFAHLDATVVLSRDI 328
Query: 866 AELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
A LGIYPA+DPL+S S+Q+DP ++G+ HY + V+ LQ+YKEL+D
Sbjct: 329 ASLGIYPAVDPLDSTSRQVDPNVIGDAHYTITRRVQAILQRYKELRD 375
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 151/370 (40%), Gaps = 25/370 (6%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + + L +G ++PVG LGRI++ G ID + ++ +
Sbjct: 56 AICLGSAEGLRRGLTVKNMGAPIQVPVGAPTLGRIMDVLGRPIDEAGAIDAAQQRSIHQP 115
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP + E L TGIK ID + P KG + + G GKT ++ I N K
Sbjct: 116 APKFDELSPATELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHGG 175
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
++ +G++ + +++K N +D +V + + TG T+ E+FRD
Sbjct: 176 YSVFAGVGERTREGNDFYHEMKASNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRD 235
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L D++ + A ++S LL R P + + RL ER
Sbjct: 236 EGRDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER----------- 284
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
I + G++T+ I D+T P + D + L ++ + PA++ S
Sbjct: 285 --IASTKGGSITSVQAIYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDS 342
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEK 519
SR V G A Y I ++ ++ +L +Y+EL +L K + K
Sbjct: 343 TSRQVDPNVIGDAHYTITRR----VQAILQRYKELRDIIAILGMDELSPEDKLAVARARK 398
Query: 520 ISLLMKQKPH 529
I + Q H
Sbjct: 399 IQRFLSQPFH 408
>gi|416242067|ref|ZP_11633201.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis BC7]
gi|326571628|gb|EGE21643.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis BC7]
Length = 514
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/404 (57%), Positives = 306/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +L +GQK +CT +I E+PVG ELLGR+V++ G ID K K + VEKI
Sbjct: 74 AVVLGEYLSLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDGKGPINAKLTDKVEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV+EP++TG K++D+MIPIG+GQRELIIGDRQTGKT +AID II QKN +
Sbjct: 134 APGVIARQSVDEPVMTGYKAVDTMIPIGRGQRELIIGDRQTGKTALAIDAIIAQKNSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ + YT VV A+A++ AA QYI+PY+GCT+GEYFRD
Sbjct: 194 CVYVAIGQKRSTIANVVRKLEETGALAYTTVVVASASEPAALQYIAPYSGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++E
Sbjct: 254 GEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNADYVEAF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL++NLFNS RPA+N G+
Sbjct: 314 TGGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESNLFNSGIRPAVNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKLSG IR LAQYREL +F++F+SDLD TK QL +G +++ LMK
Sbjct: 374 SVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFAQFASDLDDATKQQLEHGVRVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK + SI + ++ + +P+++I FE ++Y R
Sbjct: 434 QKQYAPMSIADQAAVIYASNEGYLSDVPVEKIGAFEEAFLRYLR 477
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 150/320 (46%), Gaps = 27/320 (8%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + PVG LGR+++ LG+PID KG IN+K + + P + + + TG
Sbjct: 92 TGRILEVPVGPELLGRVVDALGNPIDGKGPINAKLTDKVEKIAPGVIARQSVDEPVMTGY 151
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCS-VFIGVGERSREGNDF 729
K +D + P +G + + G GKT ++ I IA ++ G V++ +G++ +
Sbjct: 152 KAVDTMIPIGRGQRELIIGDRQTGKTALAIDAI--IAQKNSGIKCVYVAIGQKRSTIANV 209
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
+++E+ L +++ +EP+ + +G ++ E FR+ G+D L+ D++ + +
Sbjct: 210 VRKLEETGALAYTTVVVASASEPAALQYIAPYSGCTMGEYFRDRGEDALIVYDDLSKQAV 269
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST---------------KNGTITSVQ 834
A ++S +L R P Y + +L ER S K G++T++
Sbjct: 270 AYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNADYVEAFTGGEVKGKTGSLTALP 329
Query: 835 AIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHY 894
I A D++ P+ + D I L + GI PA++ S S+ + G
Sbjct: 330 IIETQAGDVSAFVPTNVISITDGQIFLESNLFNSGIRPAVNAGISVSR-----VGGAAQT 384
Query: 895 KV----ANEVKFYLQKYKEL 910
K+ + ++ L +Y+EL
Sbjct: 385 KIIKKLSGGIRTALAQYREL 404
>gi|319760158|ref|YP_004124096.1| ATP synthase subunit beta [Candidatus Blochmannia vafer str. BVAF]
gi|318038872|gb|ADV33422.1| ATP synthase subunit beta [Candidatus Blochmannia vafer str. BVAF]
Length = 467
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/342 (69%), Positives = 286/342 (83%), Gaps = 1/342 (0%)
Query: 572 NLKNNISI-NKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNV 630
NLKN I +V+QQ+G +VR IA G+T+G+ R IV + + I PVG TLGRI+NV
Sbjct: 39 NLKNEKKIILEVEQQLGGGVVRCIAMGSTDGLCRGLIVGNLKRCIEVPVGKETLGRIMNV 98
Query: 631 LGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGG 690
LG+PID KG I + ++ IH P + N +L TGIKVIDL+CPF+KGGKIGLFGG
Sbjct: 99 LGEPIDKKGSIKTIERRSIHQFSPLYHELSTNQELLVTGIKVIDLMCPFIKGGKIGLFGG 158
Query: 691 AGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMN 750
AGVGKTVN+MELIRNIA+EH G SVF+GVGER+REGNDFYHEM S++++KV+L+YGQMN
Sbjct: 159 AGVGKTVNIMELIRNIAVEHSGYSVFVGVGERTREGNDFYHEMIHSDIINKVALVYGQMN 218
Query: 751 EPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPT 810
EP GNR RVALTGL+IAE+FR+ G +VLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQ T
Sbjct: 219 EPPGNRFRVALTGLTIAEKFRDDGYNVLLFIDNIYRYTLAGTEVSALLGRVPSAVGYQST 278
Query: 811 LAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGI 870
L+EEMG LQERI+STK+G ITSVQAIYVPADDLTDPSP+TTF HLD+TIVLSRQIA LGI
Sbjct: 279 LSEEMGMLQERIASTKSGAITSVQAIYVPADDLTDPSPTTTFAHLDATIVLSRQIAALGI 338
Query: 871 YPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
YPA+DPL+S+S+QLDP+IVG+EHY VAN V+ LQ+Y+ELKD
Sbjct: 339 YPAVDPLDSHSQQLDPFIVGQEHYDVANAVRSILQRYQELKD 380
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 155/347 (44%), Gaps = 29/347 (8%)
Query: 187 EKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIK 246
++ E+PVG E LGRI+N GE ID K R ++ + +P + + E L+TGIK
Sbjct: 80 KRCIEVPVGKETLGRIMNVLGEPIDKKGSIKTIERRSIHQFSPLYHELSTNQELLVTGIK 139
Query: 247 SIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVIN 305
ID M P KG + + G GKT ++ I N + ++V +G++ + +
Sbjct: 140 VIDLMCPFIKGGKIGLFGGAGVGKTVNIMELIRNIAVEHSGYSVFVGVGERTREGNDFYH 199
Query: 306 KLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAY 365
++ + + ++ +V + ++ TG TI E FRD G + L+ D++ ++ A
Sbjct: 200 EMIHSDIINKVALVYGQMNEPPGNRFRVALTGLTIAEKFRDDGYNVLLFIDNIYRYTLAG 259
Query: 366 RQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIET 425
++S LL R P + S L E + +++I + +G +T+ I
Sbjct: 260 TEVSALLGRVPSAVGY-------QSTLSEEMGML------QERIASTKSGAITSVQAIYV 306
Query: 426 LEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVK 480
D+T PT + D I L + PA++ S S+ + G Y +
Sbjct: 307 PADDLTDPSPTTTFAHLDATIVLSRQIAALGIYPAVDPLDSHSQQLDPFIVGQEHYDVAN 366
Query: 481 KLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMKQK 527
+R +L +Y+EL+ + I+ +L +K+ +L +K
Sbjct: 367 A----VRSILQRYQELKDI------IAILGMDELSESDKLIVLRSRK 403
>gi|239817829|ref|YP_002946739.1| F0F1 ATP synthase subunit beta [Variovorax paradoxus S110]
gi|239804406|gb|ACS21473.1| ATP synthase F1, beta subunit [Variovorax paradoxus S110]
Length = 466
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 230/339 (67%), Positives = 280/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R IV +TG PI PVG TLGRI++VLG PID +G+
Sbjct: 40 EVQQQLGDGVVRTIALGSSDGLRRGLIVTNTGAPITVPVGKATLGRIMDVLGRPIDERGD 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
++ + IH P + + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 VSQDLTASIHRKAPAYDELSPSQDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA H G SVF GVGER+REGNDFYHEM +S V++ KV+++YGQMNEP
Sbjct: 160 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADSGVVNLEKLEDSKVAMVYGQMNEPP 219
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL+IAE FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 220 GNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 279
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA
Sbjct: 280 EMGRLQERITSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPA 339
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKEL+D
Sbjct: 340 VDPLDSTSRQLDPNVVGEEHYNVARAVQGTLQRYKELRD 378
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 131/323 (40%), Gaps = 40/323 (12%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + ++ + AP + + L TGIK ID +
Sbjct: 76 VPVGKATLGRIMDVLGRPIDERGDVSQDLTASIHRKAPAYDELSPSQDLLETGIKVIDLV 135
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K + + ++ +G++ + Y+
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDF-----YH 190
Query: 311 NCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGEYFRDLGQDCLIIYDDL 358
D VV DS Q P TG TI E FRD G+D L D++
Sbjct: 191 EMADSGVVNLEKLEDSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNI 250
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P + + RL ER I + G++T
Sbjct: 251 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKVGSIT 297
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L ++ + PA++ S SR V G
Sbjct: 298 SIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGE 357
Query: 474 AQYKIVKKLSGDIRIMLAQYREL 496
Y + + + G L +Y+EL
Sbjct: 358 EHYNVARAVQG----TLQRYKEL 376
>gi|379009280|ref|YP_005267093.1| F1 sector of membrane-bound ATP synthase, beta subunit
[Wigglesworthia glossinidia endosymbiont of Glossina
morsitans morsitans (Yale colony)]
gi|375157804|gb|AFA40870.1| F1 sector of membrane-bound ATP synthase, beta subunit
[Wigglesworthia glossinidia endosymbiont of Glossina
morsitans morsitans (Yale colony)]
Length = 462
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/339 (70%), Positives = 282/339 (83%)
Query: 574 KNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGD 633
KN I +V QQIG+ IVR I G+++G+KR IV + K I PVG TLGRI+NVLG
Sbjct: 35 KNTTLIMEVMQQIGDGIVRCILMGSSDGLKRGLIVYNLNKTIEIPVGKVTLGRIMNVLGH 94
Query: 634 PIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGV 693
PID KG+I S++ IH P ++ ++ +LETGIK+IDL+CPF+KGGKIGLFGGAGV
Sbjct: 95 PIDMKGDIISEEYRSIHNEAPNYNAISTSDELLETGIKIIDLICPFIKGGKIGLFGGAGV 154
Query: 694 GKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPS 753
GKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEM S V+DKVSL+YGQMNEP
Sbjct: 155 GKTVNMMELIRNIAIEHSGYSVFTGVGERTREGNDFYHEMIASKVIDKVSLVYGQMNEPP 214
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTL+E
Sbjct: 215 GNRLRVALTGLTLAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLSE 274
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG QERI+ST G+ITSVQAIYVPADDLTDPSP+TTF HLD+TIVLSR IA LGIYP+
Sbjct: 275 EMGMFQERIASTHTGSITSVQAIYVPADDLTDPSPATTFVHLDATIVLSRNIASLGIYPS 334
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IDPL+S S+ LDP +VGE+HY +A +V+ LQ+YK+LKD
Sbjct: 335 IDPLDSTSRHLDPLVVGEQHYLIARQVQSILQRYKDLKD 373
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 160/371 (43%), Gaps = 31/371 (8%)
Query: 134 LNQTLNIKFANNTVLSGQINGTTGYEEAAAQGFV-AVLIDDLKNLTQGQKCFCTEKIFEI 192
LN L +K N T++ + + G V +L+ L +G + K EI
Sbjct: 26 LNFALKVKNKNTTLIMEVM-------QQIGDGIVRCILMGSSDGLKRGLIVYNLNKTIEI 78
Query: 193 PVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSMI 252
PVG LGRI+N G ID K + + ++ AP + +E L TGIK ID +
Sbjct: 79 PVGKVTLGRIMNVLGHPIDMKGDIISEEYRSIHNEAPNYNAISTSDELLETGIKIIDLIC 138
Query: 253 PIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYYN 311
P KG + + G GKT ++ I N + ++ +G++ + +++
Sbjct: 139 PFIKGGKIGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFTGVGERTREGNDFYHEMIASK 198
Query: 312 CMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISLL 371
+D +V + + TG T+ E FRD G+D L+ D++ ++ A ++S L
Sbjct: 199 VIDKVSLVYGQMNEPPGNRLRVALTGLTLAEKFRDEGRDVLLFIDNIYRYTLAGTEVSAL 258
Query: 372 LRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDVT 431
L R P + + S ++ + +++I + + G++T+ I D+T
Sbjct: 259 LGRMPSAVGYQPTL----------SEEMGMF---QERIASTHTGSITSVQAIYVPADDLT 305
Query: 432 SFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGDI 486
P D I L N+ + P+I+ S SR V G Y I ++ +
Sbjct: 306 DPSPATTFVHLDATIVLSRNIASLGIYPSIDPLDSTSRHLDPLVVGEQHYLIARQ----V 361
Query: 487 RIMLAQYRELE 497
+ +L +Y++L+
Sbjct: 362 QSILQRYKDLK 372
>gi|378821598|ref|ZP_09844478.1| ATP synthase F1, alpha subunit [Sutterella parvirubra YIT 11816]
gi|378599543|gb|EHY32551.1| ATP synthase F1, alpha subunit [Sutterella parvirubra YIT 11816]
Length = 513
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 229/404 (56%), Positives = 309/404 (76%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++++G T +I +PVG EL+GR+VN+ G+ ID K K + VEK+
Sbjct: 73 AVILGEYEHISEGDTVKTTGRILSVPVGRELIGRVVNALGQPIDGKGPVEAKEFDVVEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR+SV++P+ TG+KSIDSM+P+G+GQRELIIGDRQTGKT +AIDTIINQK K++I
Sbjct: 133 APGVIDRQSVSQPVQTGLKSIDSMVPVGRGQRELIIGDRQTGKTAVAIDTIINQKGKDLI 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ M+YT+VVAATA++SAA QYI+PY G T+GEYFRD
Sbjct: 193 CVYVAIGQKASTIANVVRKLEESGAMEYTIVVAATASESAAMQYIAPYAGATMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N ++E+
Sbjct: 253 GEDSLIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNPAYVERF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G++TA PIIET GDVT+F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TKGAVKGKTGSMTALPIIETQAGDVTAFVPTNVISITDGQIFLETDLFNAGIRPAINPGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G +R+ LAQYREL +F++F+SDLD VT+ QL G ++ LMK
Sbjct: 373 SVSRVGGAAQTKIIKKLGGGVRLALAQYRELAAFAQFASDLDDVTRKQLERGRVVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q ++ + E ++L + + + + E + +Y +
Sbjct: 433 QPQYQPLQVWEEALVLYAVNCGAYDDVTVADALRVERGMREYLK 476
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 154/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I V TG+ + PVG +GR++N LG PID KG + +K+ +
Sbjct: 71 VGAVILGEYEHISEGDTVKTTGRILSVPVGRELIGRVVNALGQPIDGKGPVEAKEFDVVE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P ++ + ++TG+K ID + P +G + + G GKT ++ I N +
Sbjct: 131 KVAPGVIDRQSVSQPVQTGLKSIDSMVPVGRGQRELIIGDRQTGKTAVAIDTIINQKGKD 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C V++ +G+++ + +++ES ++ ++ +E + + G ++ E F
Sbjct: 191 LIC-VYVAIGQKASTIANVVRKLEESGAMEYTIVVAATASESAAMQYIAPYAGATMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 250 RDRGEDSLIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNPAYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D+T P+ + D I L + GI PAI+
Sbjct: 310 ERFTKGAVKGKTGSMTALPIIETQAGDVTAFVPTNVISITDGQIFLETDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
P S S+ + G K+ + V+ L +Y+EL
Sbjct: 370 PGISVSR-----VGGAAQTKIIKKLGGGVRLALAQYREL 403
>gi|319796134|ref|YP_004157774.1| ATP synthase f1 subunit beta [Variovorax paradoxus EPS]
gi|315598597|gb|ADU39663.1| ATP synthase F1, beta subunit [Variovorax paradoxus EPS]
Length = 466
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 230/339 (67%), Positives = 280/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R IV +TG PI PVG TLGRI++VLG PID +G+
Sbjct: 40 EVQQQLGDGVVRTIALGSSDGLRRGLIVTNTGAPITVPVGKATLGRIMDVLGRPIDERGD 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
++ + IH P + + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 VSQDLTASIHRKAPAYDELSPSQDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA H G SVF GVGER+REGNDFYHEM +S V++ KV+++YGQMNEP
Sbjct: 160 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADSGVVNLDNLPESKVAMVYGQMNEPP 219
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL+IAE FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 220 GNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 279
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA
Sbjct: 280 EMGRLQERITSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPA 339
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKEL+D
Sbjct: 340 VDPLDSTSRQLDPNVVGEEHYNVARAVQGTLQRYKELRD 378
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 132/323 (40%), Gaps = 40/323 (12%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + ++ + AP + + L TGIK ID +
Sbjct: 76 VPVGKATLGRIMDVLGRPIDERGDVSQDLTASIHRKAPAYDELSPSQDLLETGIKVIDLV 135
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKI------------S 298
P KG + + G GKT ++ I N K + + ++ +G++ S
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADS 195
Query: 299 SLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDL 358
++N+ N + M Y + + TG TI E FRD G+D L D++
Sbjct: 196 GVVNLDNLPESKVAMVY-----GQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNI 250
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P + + RL ER I + G++T
Sbjct: 251 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKVGSIT 297
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L ++ + PA++ S SR V G
Sbjct: 298 SIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGE 357
Query: 474 AQYKIVKKLSGDIRIMLAQYREL 496
Y + + + G L +Y+EL
Sbjct: 358 EHYNVARAVQG----TLQRYKEL 376
>gi|386289361|ref|ZP_10066491.1| F0F1 ATP synthase subunit alpha [gamma proteobacterium BDW918]
gi|385277424|gb|EIF41406.1| F0F1 ATP synthase subunit alpha [gamma proteobacterium BDW918]
Length = 514
Score = 494 bits (1272), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/402 (57%), Positives = 306/402 (76%), Gaps = 2/402 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D + +GQ C CT +I E+PVG ELLGR+V++ G ID K K + +EK+
Sbjct: 74 AVVLGDYLGIAEGQTCKCTGRILEVPVGPELLGRVVDALGNPIDGKGPINAKLTDAIEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ G+K++D+M+PIG+GQRELIIGDRQ GKT IAID IINQK+ +
Sbjct: 134 APGVIWRKSVDQPVQIGLKAVDAMVPIGRGQRELIIGDRQIGKTAIAIDAIINQKSSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK SS+ V+ KL+ + MD+TVVVAATA+D A+ Q+I+P+TGCTIGEY+RD
Sbjct: 194 CVYVAIGQKASSIAAVVRKLEEHGAMDHTVVVAATASDPASMQFIAPFTGCTIGEYYRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++++ ++EK
Sbjct: 254 GEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVSEDYVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA P+IET GDV++F+PTNVISITDGQIF++T++FNS RPA+N G+
Sbjct: 314 TNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFVETDMFNSGIRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKLSG IR LAQYREL +FS+F+SDLD TK QL GE+++ LMK
Sbjct: 374 SVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFSQFASDLDEATKAQLSQGERVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKY 567
QK + SI E+ + L + + +I FE I+ +
Sbjct: 434 QKQYSPLSIAEMGLSLYCANEGHLKNVEVAKILDFESAILSF 475
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 153/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ GI TG+ + PVG LGR+++ LG+PID KG IN+K I
Sbjct: 72 VGAVVLGDYLGIAEGQTCKCTGRILEVPVGPELLGRVVDALGNPIDGKGPINAKLTDAIE 131
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++ G+K +D + P +G + + G +GKT ++ I N
Sbjct: 132 KVAPGVIWRKSVDQPVQIGLKAVDAMVPIGRGQRELIIGDRQIGKTAIAIDAIINQKSSG 191
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C V++ +G+++ +++E +D ++ ++P+ + TG +I E +
Sbjct: 192 IKC-VYVAIGQKASSIAAVVRKLEEHGAMDHTVVVAATASDPASMQFIAPFTGCTIGEYY 250
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 251 RDRGEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVSEDYV 310
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I + + GI PA++
Sbjct: 311 EKFTNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFVETDMFNSGIRPAMN 370
Query: 876 PLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
S S+ + G K+ + ++ L +Y+EL
Sbjct: 371 AGISVSR-----VGGAAQTKIIKKLSGGIRTALAQYREL 404
>gi|118498210|ref|YP_899260.1| F0F1 ATP synthase subunit alpha [Francisella novicida U112]
gi|194324394|ref|ZP_03058167.1| ATP synthase F1, alpha subunit [Francisella novicida FTE]
gi|208780237|ref|ZP_03247579.1| ATP synthase F1, alpha subunit [Francisella novicida FTG]
gi|254375019|ref|ZP_04990499.1| ATP synthase [Francisella novicida GA99-3548]
gi|158512430|sp|A0Q8E1.1|ATPA_FRATN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|118424116|gb|ABK90506.1| ATP synthase, F1 sector, subunit alpha [Francisella novicida U112]
gi|151572737|gb|EDN38391.1| ATP synthase [Francisella novicida GA99-3548]
gi|194321459|gb|EDX18944.1| ATP synthase F1, alpha subunit [Francisella tularensis subsp.
novicida FTE]
gi|208743886|gb|EDZ90188.1| ATP synthase F1, alpha subunit [Francisella novicida FTG]
Length = 513
Score = 494 bits (1272), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/396 (58%), Positives = 304/396 (76%), Gaps = 2/396 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++ +G K +CT +I E+PVG LLGR+V++ G ID K + +EKI
Sbjct: 73 AVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEVATDLTSPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++ L TGIKSIDSM+PIG+GQRELIIGDRQ GKT IA+DTIINQK V
Sbjct: 133 APGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTIINQKGTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S++ N++ +L+ + M++T++VAATA+DSAA QYI+PY GC++GEYFRD
Sbjct: 193 CIYVAIGQKASTIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N+ ++EK
Sbjct: 253 GQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GD+++F+PTNVISITDGQIFL+T+LFNS RPAIN G
Sbjct: 313 TNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRPAINPGN 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQYRELE+FS+F+SDLD T+ QL G++++ L+K
Sbjct: 373 SVSRVGGAAQTKIIKKLGGGIRLALAQYRELEAFSQFASDLDEATRAQLNRGQRVTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFE 561
QK S+ + + L N + + + ++ FE
Sbjct: 433 QKQFSTLSVALMALSLYAADNGYLDNLEVSEVIPFE 468
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 158/343 (46%), Gaps = 31/343 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ IK TG+ + PVG+ LGR+++ LG+PID KGE+ + SPI
Sbjct: 71 VGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEVATDLTSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TGIK ID + P +G + + G +GKT ++ I I
Sbjct: 131 KIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTI----INQ 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ +G+++ + +++E ++ ++ ++ + + G S+
Sbjct: 187 KGTGVKCIYVAIGQKASTIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 247 EYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNE 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + G+ P
Sbjct: 307 EYVEKFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKELK 911
AI+P S S+ + G K+ + ++ L +Y+EL+
Sbjct: 367 AINPGNSVSR-----VGGAAQTKIIKKLGGGIRLALAQYRELE 404
>gi|160895869|ref|YP_001561451.1| F0F1 ATP synthase subunit beta [Delftia acidovorans SPH-1]
gi|333912096|ref|YP_004485828.1| ATP synthase F1 subunit beta [Delftia sp. Cs1-4]
gi|226740187|sp|A9BPU7.1|ATPB_DELAS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|160361453|gb|ABX33066.1| ATP synthase F1, beta subunit [Delftia acidovorans SPH-1]
gi|333742296|gb|AEF87473.1| ATP synthase F1, beta subunit [Delftia sp. Cs1-4]
Length = 469
Score = 494 bits (1272), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/354 (65%), Positives = 285/354 (80%), Gaps = 7/354 (1%)
Query: 566 KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLG 625
K F + L + +VQQ +G+ +VRTIA G+++G++R +V +TG PI PVG TLG
Sbjct: 27 KVFDALKLDGSALTLEVQQLLGDGVVRTIALGSSDGLRRGLMVSNTGNPITVPVGKATLG 86
Query: 626 RILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKI 685
RI++VLG+PID +G ++ +PIH P + + +LETGIKVIDL+ PF KGGK+
Sbjct: 87 RIMDVLGNPIDERGPVDQALTAPIHRKAPAYDELSPSQELLETGIKVIDLISPFAKGGKV 146
Query: 686 GLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD----- 740
GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM ++ V++
Sbjct: 147 GLFGGAGVGKTVNMMELINNIAKGHGGLSVFAGVGERTREGNDFYHEMSDAGVVNQESLN 206
Query: 741 --KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAML 798
KV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVL F+DNIYR+TLAGTEVSA+L
Sbjct: 207 DSKVAMVYGQMNEPPGNRLRVALTGLTMAEAFRDEGKDVLFFVDNIYRYTLAGTEVSALL 266
Query: 799 GRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDST 858
GR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST
Sbjct: 267 GRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDST 326
Query: 859 IVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHYKVA EV+ LQ+YKEL+D
Sbjct: 327 VVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGEEHYKVAREVQGTLQRYKELRD 380
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 158/391 (40%), Gaps = 48/391 (12%)
Query: 132 RCLNQTLNIKFANNTVL----SGQING---TTGYEEAAAQGFV-AVLIDDLKNLTQGQKC 183
+C+ ++++F N + + +++G T ++ G V + + L +G
Sbjct: 10 QCIGAVVDVEFPRNAMPKVFDALKLDGSALTLEVQQLLGDGVVRTIALGSSDGLRRGLMV 69
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T +PVG LGRI++ G ID + + + AP + E L T
Sbjct: 70 SNTGNPITVPVGKATLGRIMDVLGNPIDERGPVDQALTAPIHRKAPAYDELSPSQELLET 129
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + ++ +G++ +
Sbjct: 130 GIKVIDLISPFAKGGKVGLFGGAGVGKTVNMMELINNIAKGHGGLSVFAGVGERTREGND 189
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGEYFRDLGQD 350
Y+ D VV + DS Q P TG T+ E FRD G+D
Sbjct: 190 F-----YHEMSDAGVVNQESLNDSKVAMVYGQMNEPPGNRLRVALTGLTMAEAFRDEGKD 244
Query: 351 CLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIF 410
L D++ ++ A ++S LL R P + + RL ER I
Sbjct: 245 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------IT 291
Query: 411 NKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR- 469
+ G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 292 STKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQ 351
Query: 470 ----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G YK+ +++ G L +Y+EL
Sbjct: 352 LDPQVVGEEHYKVAREVQG----TLQRYKEL 378
>gi|451811930|ref|YP_007448384.1| F-type H+-transporting ATPase subunit beta [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451777832|gb|AGF48780.1| F-type H+-transporting ATPase subunit beta [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 467
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 277/332 (83%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVR I+ G+++G+ R + T PI PVGD TLGRI+NVLG PID G
Sbjct: 46 EVQQQLGDGIVRAISLGSSDGLSRGMKISRTNSPISVPVGDGTLGRIMNVLGRPIDEAGP 105
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + IH P F + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 106 IVHDEIRSIHQNAPLFEDLSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 165
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA +H G SVF GVGER+REGNDFYHEM ES VLDKVS+++GQMNEP GNRLRVA
Sbjct: 166 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMAESKVLDKVSMVFGQMNEPPGNRLRVA 225
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL+IAE+FR+ G+DVL FIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 226 LTGLTIAEKFRDDGRDVLFFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 285
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA+DPL+S
Sbjct: 286 RITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDST 345
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP IVG+EHY+VA +V+ LQ+YK+L+D
Sbjct: 346 SRQLDPQIVGDEHYRVARQVQQTLQRYKDLRD 377
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 157/368 (42%), Gaps = 27/368 (7%)
Query: 136 QTLNIKFANNTVLSGQINGTTGYEEAAAQGFV-AVLIDDLKNLTQGQKCFCTEKIFEIPV 194
+ LN+ NN+ + ++ T ++ G V A+ + L++G K T +PV
Sbjct: 28 EALNV-IDNNSFMEKKL--TLEVQQQLGDGIVRAISLGSSDGLSRGMKISRTNSPISVPV 84
Query: 195 GFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSMIPI 254
G LGRI+N G ID + ++ + AP D E L TGIK ID + P
Sbjct: 85 GDGTLGRIMNVLGRPIDEAGPIVHDEIRSIHQNAPLFEDLSPSVELLETGIKVIDLVCPF 144
Query: 255 GKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYYNCM 313
KG + + G GKT ++ I N K + + ++ +G++ + +++ +
Sbjct: 145 AKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVGERTREGNDFYHEMAESKVL 204
Query: 314 DYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLR 373
D +V + + TG TI E FRD G+D L D++ ++ A ++S LL
Sbjct: 205 DKVSMVFGQMNEPPGNRLRVALTGLTIAEKFRDDGRDVLFFIDNIYRYTLAGTEVSALLG 264
Query: 374 RPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSF 433
R P + L E K+ +++I + G++T+ + D+T
Sbjct: 265 RMPSAVGY-------QPTLAEEMGKL------QERITSTKTGSITSIQAVYVPADDLTDP 311
Query: 434 IPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGDIRI 488
P D + L ++ PA++ S SR + G Y++ ++ ++
Sbjct: 312 SPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQIVGDEHYRVARQ----VQQ 367
Query: 489 MLAQYREL 496
L +Y++L
Sbjct: 368 TLQRYKDL 375
>gi|451936185|ref|YP_007460039.1| F-type H+-transporting ATPase subunit beta [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777108|gb|AGF48083.1| F-type H+-transporting ATPase subunit beta [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 468
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/356 (67%), Positives = 285/356 (80%), Gaps = 6/356 (1%)
Query: 563 NIIKYFRIINLKNNISINK------VQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
NI + +N+ +N S + VQQQ+G+ IVR IA G+++G+ R + T I
Sbjct: 23 NIPSIYEALNVMDNNSFMEKNLTLEVQQQLGDGIVRAIALGSSDGLSRGMKISRTNSHIS 82
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVGD TLGRI+NVLG PID G I IH P F + + ++LETGIKVIDL+
Sbjct: 83 VPVGDGTLGRIMNVLGRPIDEAGPIVHDITRSIHQNAPLFEDLSPSIDLLETGIKVIDLV 142
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA +H G SVF GVGER+REGNDFYHEM ES
Sbjct: 143 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVGERTREGNDFYHEMAES 202
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
VLDKVS+++GQMNEP GNRLRVALTGL+IAE+FR+ G+DVL FIDNIYR+TLAGTEVSA
Sbjct: 203 KVLDKVSMVFGQMNEPPGNRLRVALTGLTIAEKFRDDGRDVLFFIDNIYRYTLAGTEVSA 262
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMGKLQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD
Sbjct: 263 LLGRMPSAVGYQPTLAEEMGKLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLD 322
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPA+DPL+S S+QLDP IVG+EHYKVA +V+ LQ+YK+L+D
Sbjct: 323 STVVLSRDIAALGIYPAVDPLDSTSRQLDPQIVGDEHYKVARQVQQTLQRYKDLRD 378
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 160/385 (41%), Gaps = 37/385 (9%)
Query: 132 RCLNQTLNIKFANNTVLS-------------GQINGTTGYEEAAAQGFV-AVLIDDLKNL 177
+C+ ++I+F N + S + N T ++ G V A+ + L
Sbjct: 9 QCVGAVVDIQFPKNNIPSIYEALNVMDNNSFMEKNLTLEVQQQLGDGIVRAIALGSSDGL 68
Query: 178 TQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESV 237
++G K T +PVG LGRI+N G ID + ++ + AP D
Sbjct: 69 SRGMKISRTNSHISVPVGDGTLGRIMNVLGRPIDEAGPIVHDITRSIHQNAPLFEDLSPS 128
Query: 238 NEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQK 296
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G++
Sbjct: 129 IDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAGVGER 188
Query: 297 ISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYD 356
+ +++ +D +V + + TG TI E FRD G+D L D
Sbjct: 189 TREGNDFYHEMAESKVLDKVSMVFGQMNEPPGNRLRVALTGLTIAEKFRDDGRDVLFFID 248
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P + L E K+ +++I + G+
Sbjct: 249 NIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGKL------QERITSTKTGS 295
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VG 471
+T+ + D+T P D + L ++ PA++ S SR +
Sbjct: 296 ITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQIV 355
Query: 472 GAAQYKIVKKLSGDIRIMLAQYREL 496
G YK+ ++ ++ L +Y++L
Sbjct: 356 GDEHYKVARQ----VQQTLQRYKDL 376
>gi|90413754|ref|ZP_01221742.1| ATP synthase subunit B [Photobacterium profundum 3TCK]
gi|90325223|gb|EAS41720.1| ATP synthase subunit B [Photobacterium profundum 3TCK]
Length = 468
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/346 (67%), Positives = 283/346 (81%), Gaps = 7/346 (2%)
Query: 574 KNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGD 633
+N I I +VQQQ+G +VR IA G ++G++R V +TG+PI PVG TLGRI+NVLG
Sbjct: 36 ENGILILEVQQQLGGGVVRGIAMGTSDGLRRGLSVENTGRPIEVPVGTATLGRIMNVLGQ 95
Query: 634 PIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGV 693
PID GEI +++ IH P + Q +LETG+KVIDL+CPF KGGKIGLFGGAGV
Sbjct: 96 PIDECGEIGEEQRYAIHREAPSYEEQSNATELLETGVKVIDLICPFAKGGKIGLFGGAGV 155
Query: 694 GKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIY 746
GKTVNMMELI NIA++H G SVF GVGER+REGNDFY EM+E+ V++ KV+++Y
Sbjct: 156 GKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNIENPSESKVAMVY 215
Query: 747 GQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVG 806
GQMNEP GNRLRVALTGL++AE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVG
Sbjct: 216 GQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVG 275
Query: 807 YQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIA 866
YQPTLAEEMG LQERI+STK+G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA
Sbjct: 276 YQPTLAEEMGVLQERITSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIA 335
Query: 867 ELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LG+YPAIDPL+S S+ LDP +VG+EHY +A V+ LQ+YKELKD
Sbjct: 336 SLGLYPAIDPLDSTSRMLDPLVVGQEHYDIARGVQSLLQRYKELKD 381
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 156/378 (41%), Gaps = 50/378 (13%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T + E+PVG LGRI+N G+ ID + + R + + AP ++
Sbjct: 63 GLRRGLSVENTGRPIEVPVGTATLGRIMNVLGQPIDECGEIGEEQRYAIHREAPSYEEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TG+K ID + P KG + + G GKT ++ I N + + ++ +G
Sbjct: 123 NATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVG 182
Query: 295 QKI------------SSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGE 342
++ + ++N+ N + M Y + + TG T+ E
Sbjct: 183 ERTREGNDFYFEMQEAGVVNIENPSESKVAMVY-----GQMNEPPGNRLRVALTGLTMAE 237
Query: 343 YFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKY 402
FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 238 RFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL--- 287
Query: 403 FLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAIN 462
+++I + +G++T+ + D+T P + D + L + + PAI+
Sbjct: 288 ---QERITSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPAID 344
Query: 463 VGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE------SFSKFSSDLDIVTK 511
S SR V G Y I + ++ +L +Y+EL+ + S D K
Sbjct: 345 PLDSTSRMLDPLVVGQEHYDIARG----VQSLLQRYKELKDIIAILGMDELSED----DK 396
Query: 512 TQLYNGEKISLLMKQKPH 529
+ KI + Q H
Sbjct: 397 QAVSRARKIERFLTQPYH 414
>gi|254369897|ref|ZP_04985906.1| ATP synthase subunit alpha [Francisella tularensis subsp.
holarctica FSC022]
gi|157122867|gb|EDO66984.1| ATP synthase subunit alpha [Francisella tularensis subsp.
holarctica FSC022]
Length = 513
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/396 (58%), Positives = 304/396 (76%), Gaps = 2/396 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++ +G K +CT +I E+PVG LLGR+V++ G ID K + +EKI
Sbjct: 73 AVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEVATDLTSPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++ L TGIKSIDSM+PIG+GQRELIIGDRQ GKT IA+DTIINQK V
Sbjct: 133 APGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTIINQKGTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S++ N++ +L+ + M++T++VAATA+DSAA QYI+PY GC++GEYFRD
Sbjct: 193 CIYVAIGQKASTIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N+ ++EK
Sbjct: 253 GQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GD+++F+PTNVISITDGQIFL+T+LFNS RPAIN G
Sbjct: 313 TNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRPAINPGN 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQYRELE+FS+F+SDLD T+ QL G++++ L+K
Sbjct: 373 SVSRVGGAAQTKIIKKLGGGIRLALAQYRELEAFSQFASDLDEATRAQLNRGQRVTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFE 561
QK S+ + + L N + + + ++ FE
Sbjct: 433 QKQFSTLSVALMALSLYAADNGYLDNLEVSEVIPFE 468
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 158/343 (46%), Gaps = 31/343 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ IK TG+ + PVG+ LGR+++ LG+PID KGE+ + SPI
Sbjct: 71 VGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEVATDLTSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TGIK ID + P +G + + G +GKT ++ I I
Sbjct: 131 KIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTI----INQ 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ +G+++ + +++E ++ ++ ++ + + G S+
Sbjct: 187 KGTGVKCIYVAIGQKASTIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 247 EYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNE 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + G+ P
Sbjct: 307 EYVEKFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKELK 911
AI+P S S+ + G K+ + ++ L +Y+EL+
Sbjct: 367 AINPGNSVSR-----VGGAAQTKIIKKLGGGIRLALAQYRELE 404
>gi|374621103|ref|ZP_09693637.1| ATP synthase, F1 beta subunit [gamma proteobacterium HIMB55]
gi|374304330|gb|EHQ58514.1| ATP synthase, F1 beta subunit [gamma proteobacterium HIMB55]
Length = 467
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/366 (63%), Positives = 289/366 (78%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E ++ K + + + + +VQQQ+G+ +VR IA G++ G+ R V +TG
Sbjct: 13 VVDVEFPRDSVPKVYDALTITDKGLTLEVQQQLGDGVVRAIAMGSSEGVSRGLSVDNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG+PID +G I K++S IH P + + +LETGIKVI
Sbjct: 73 PISVPVGTETLGRIMDVLGNPIDERGPIGEKERSSIHRAAPTYEELAASEELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFY+EM
Sbjct: 133 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIATEHSGLSVFAGVGERTREGNDFYYEM 192
Query: 734 KESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
+ES V++ KV+++YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR
Sbjct: 193 QESKVVNVENLDESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYR 252
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 253 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDP 312
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLDST+VLSR IA GIYPA+DPL+S S+QLDP I+G EHY+VA V+ LQ+
Sbjct: 313 SPATTFAHLDSTVVLSRDIAAKGIYPAVDPLDSTSRQLDPLIIGTEHYEVARGVQSVLQR 372
Query: 907 YKELKD 912
YKELKD
Sbjct: 373 YKELKD 378
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 150/348 (43%), Gaps = 40/348 (11%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + + +++G T +PVG E LGRI++ G ID + K R ++ +
Sbjct: 52 AIAMGSSEGVSRGLSVDNTGAPISVPVGTETLGRIMDVLGNPIDERGPIGEKERSSIHRA 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV- 286
AP + + E L TGIK ID + P KG + + G GKT ++ I N ++
Sbjct: 112 APTYEELAASEELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIATEHSG 171
Query: 287 ICIYVCIGQKI------------SSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISP 334
+ ++ +G++ S ++NV N + M Y + +
Sbjct: 172 LSVFAGVGERTREGNDFYYEMQESKVVNVENLDESKVAMVY-----GQMNEPPGNRLRVA 226
Query: 335 YTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLE 394
TG T+ E FRD G+D L+ D++ ++ A ++S LL R P V Y L E
Sbjct: 227 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAE 279
Query: 395 RSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFN 454
+ +++I + G++T+ + D+T P + D + L ++
Sbjct: 280 EMGVL------QERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAA 333
Query: 455 SNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
PA++ S SR + G Y++ + ++ +L +Y+EL+
Sbjct: 334 KGIYPAVDPLDSTSRQLDPLIIGTEHYEVARG----VQSVLQRYKELK 377
>gi|114777383|ref|ZP_01452380.1| F0F1 ATP synthase subunit beta [Mariprofundus ferrooxydans PV-1]
gi|114552165|gb|EAU54667.1| F0F1 ATP synthase subunit beta [Mariprofundus ferrooxydans PV-1]
Length = 462
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 236/333 (70%), Positives = 277/333 (83%), Gaps = 1/333 (0%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+ QQ IG N VR +A G+T+G+KR V DTG I+ PVG TLGRI+NVLG ID +GE
Sbjct: 39 ETQQHIGNNTVRAVAMGSTDGLKRGMAVEDTGNAIMVPVGQGTLGRIMNVLGTGIDFQGE 98
Query: 641 -INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNM 699
+ +++ IH PP+F + ILETGIKVIDL+ P KGGK+GLFGGAGVGKTVNM
Sbjct: 99 AVECEERWAIHREPPRFEELAPASEILETGIKVIDLMAPIAKGGKVGLFGGAGVGKTVNM 158
Query: 700 MELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRV 759
MELI NIA H G SVF GVGER+REGNDFY+EMKESNVLDKV+L+YGQMNEP GNRLRV
Sbjct: 159 MELINNIAKAHGGFSVFAGVGERTREGNDFYYEMKESNVLDKVALVYGQMNEPPGNRLRV 218
Query: 760 ALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQ 819
ALTGL++AE FR+ G+DVL+FIDNIYR++LAG EVSA+LGR PSAVGYQPTLAEEMGKLQ
Sbjct: 219 ALTGLTMAEYFRDEGRDVLIFIDNIYRYSLAGVEVSALLGRMPSAVGYQPTLAEEMGKLQ 278
Query: 820 ERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLES 879
ERI+STK G+ITSVQA+YVPADDLTDP+P+TTF HLDSTIVLSRQIAELGIYPA+DPL+S
Sbjct: 279 ERIASTKTGSITSVQAVYVPADDLTDPAPATTFAHLDSTIVLSRQIAELGIYPAVDPLDS 338
Query: 880 YSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP +VG EHY +A V+ LQ+YKEL+D
Sbjct: 339 TSRQLDPKVVGSEHYDIAINVQQTLQRYKELQD 371
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 147/337 (43%), Gaps = 24/337 (7%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFL-IKNRETVEK 226
AV + L +G T +PVG LGRI+N G ID + + + + R + +
Sbjct: 51 AVAMGSTDGLKRGMAVEDTGNAIMVPVGQGTLGRIMNVLGTGIDFQGEAVECEERWAIHR 110
Query: 227 IAPGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKN 285
P + +E L TGIK ID M PI KG + + G GKT ++ I N K
Sbjct: 111 EPPRFEELAPASEILETGIKVIDLMAPIAKGGKVGLFGGAGVGKTVNMMELINNIAKAHG 170
Query: 286 VICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFR 345
++ +G++ + ++K N +D +V + + TG T+ EYFR
Sbjct: 171 GFSVFAGVGERTREGNDFYYEMKESNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEYFR 230
Query: 346 DLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLE 405
D G+D LI D++ +++ A ++S LL R P V Y L E K+
Sbjct: 231 DEGRDVLIFIDNIYRYSLAGVEVSALLGR------MPSAVGY-QPTLAEEMGKL------ 277
Query: 406 KKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
+++I + G++T+ + D+T P + D I L + PA++
Sbjct: 278 QERIASTKTGSITSVQAVYVPADDLTDPAPATTFAHLDSTIVLSRQIAELGIYPAVDPLD 337
Query: 466 SVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
S SR V G+ Y I +++ L +Y+EL+
Sbjct: 338 STSRQLDPKVVGSEHYDIAI----NVQQTLQRYKELQ 370
>gi|417329840|ref|ZP_12114587.1| ATP synthase subunit B, partial [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
gi|353563804|gb|EHC30049.1| ATP synthase subunit B, partial [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
Length = 406
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 229/319 (71%), Positives = 271/319 (84%)
Query: 594 IAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLP 653
IA G+++G++R V D PI PVG TLGRI+NVLG+P+D KGEI +++ IH
Sbjct: 1 IAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAA 60
Query: 654 PKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGC 713
P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G
Sbjct: 61 PSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGY 120
Query: 714 SVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS 773
SVF GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+
Sbjct: 121 SVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDE 180
Query: 774 GKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSV 833
G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSV
Sbjct: 181 GRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSV 240
Query: 834 QAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEH 893
QA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EH
Sbjct: 241 QAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEH 300
Query: 894 YKVANEVKFYLQKYKELKD 912
Y A V+ LQ+Y+ELKD
Sbjct: 301 YDTARGVQSILQRYQELKD 319
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 8 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 67
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 68 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 127
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 128 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 187
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 188 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 234
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 235 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 294
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 295 VVGQEHYDTARG----VQSILQRYQELK 318
>gi|88811295|ref|ZP_01126551.1| ATP synthase subunit A [Nitrococcus mobilis Nb-231]
gi|88791834|gb|EAR22945.1| ATP synthase subunit A [Nitrococcus mobilis Nb-231]
Length = 514
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 225/403 (55%), Positives = 307/403 (76%), Gaps = 2/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++ +G CT +I E+PVG LLGR+VN+ G+ ID K + +EK+
Sbjct: 74 AVILGDYEHIKEGDVVKCTGRIIEVPVGSGLLGRVVNALGQPIDGKGEIEHDGTSPIEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+K+ID+M+PIG+GQRELIIGDRQTGKT +A+D IINQKN +
Sbjct: 134 APGVISRQSVSQPVQTGLKAIDAMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKNTGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK SS+ V+ KL+ ++ +D+T+VVAATA++SAA QYI+PY GC++GEYFRD
Sbjct: 194 CIYVAVGQKASSIAAVVRKLEEHDALDHTIVVAATASESAAMQYIAPYAGCSMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LII+DDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER+++IN +EK
Sbjct: 254 GEDALIIFDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARINADEVEKL 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA PIIET GDV++F+PTNVISITDGQIFL+++LFN+ RPAIN GL
Sbjct: 314 TKGKVKGRTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESDLFNAGIRPAINAGL 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ I+KKL G +R+ LAQYREL +F++F+SDLD T+ QL +G++++ LMK
Sbjct: 374 SVSRVGGAAQTGIIKKLGGGVRLALAQYRELAAFAQFASDLDETTRRQLEHGQRVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
QK + S+ + + L + + + + ++ FE + Y
Sbjct: 434 QKQYSPMSVAAMAVSLFAVDRGYLEDVDLSKVGDFEAALQAYM 476
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 155/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ IK +V TG+ I PVG LGR++N LG PID KGEI SPI
Sbjct: 72 VGAVILGDYEHIKEGDVVKCTGRIIEVPVGSGLLGRVVNALGQPIDGKGEIEHDGTSPIE 131
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P ++ + ++TG+K ID + P +G + + G GKT ++ I N
Sbjct: 132 KVAPGVISRQSVSQPVQTGLKAIDAMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKNTG 191
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ VG+++ +++E + LD ++ +E + + G S+ E F
Sbjct: 192 IKC-IYVAVGQKASSIAAVVRKLEEHDALDHTIVVAATASESAAMQYIAPYAGCSMGEYF 250
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTL---------------AEEM 815
R+ G+D L+ D++ + A +VS +L R P Y + A+E+
Sbjct: 251 RDRGEDALIIFDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARINADEV 310
Query: 816 GKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
KL + + G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 311 EKLTKGKVKGRTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESDLFNAGIRPAIN 370
Query: 876 PLESYSKQLDPYIVGEEHY----KVANEVKFYLQKYKEL 910
S S+ + G K+ V+ L +Y+EL
Sbjct: 371 AGLSVSR-----VGGAAQTGIIKKLGGGVRLALAQYREL 404
>gi|254373553|ref|ZP_04989040.1| ATP synthase subunit A [Francisella tularensis subsp. novicida
GA99-3549]
gi|151571278|gb|EDN36932.1| ATP synthase subunit A [Francisella novicida GA99-3549]
Length = 513
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/396 (58%), Positives = 303/396 (76%), Gaps = 2/396 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++ +G K +CT +I E+PVG LLGR+V++ G ID K +EKI
Sbjct: 73 AVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGDVATDLTSPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++ L TGIKSIDSM+PIG+GQRELIIGDRQ GKT IA+DTIINQK V
Sbjct: 133 APGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTIINQKGTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S++ N++ +L+ + M++T++VAATA+DSAA QYI+PY GC++GEYFRD
Sbjct: 193 CIYVAIGQKASTIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N+ ++EK
Sbjct: 253 GQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GD+++F+PTNVISITDGQIFL+T+LFNS RPAIN G
Sbjct: 313 TNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRPAINPGN 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQYRELE+FS+F+SDLD T+ QL G++++ L+K
Sbjct: 373 SVSRVGGAAQTKIIKKLGGGIRLALAQYRELEAFSQFASDLDEATRAQLNRGQRVTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFE 561
QK S+ + + L N + + + ++ FE
Sbjct: 433 QKQFSTLSVALMALSLYAADNGYLDNLEVSEVIPFE 468
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 158/343 (46%), Gaps = 31/343 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ IK TG+ + PVG+ LGR+++ LG+PID KG++ + SPI
Sbjct: 71 VGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGDVATDLTSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TGIK ID + P +G + + G +GKT ++ I I
Sbjct: 131 KIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTI----INQ 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ +G+++ + +++E ++ ++ ++ + + G S+
Sbjct: 187 KGTGVKCIYVAIGQKASTIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 247 EYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNE 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + G+ P
Sbjct: 307 EYVEKFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKELK 911
AI+P S S+ + G K+ + ++ L +Y+EL+
Sbjct: 367 AINPGNSVSR-----VGGAAQTKIIKKLGGGIRLALAQYRELE 404
>gi|441505639|ref|ZP_20987621.1| ATP synthase beta chain [Photobacterium sp. AK15]
gi|441426722|gb|ELR64202.1| ATP synthase beta chain [Photobacterium sp. AK15]
Length = 468
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/346 (67%), Positives = 285/346 (82%), Gaps = 7/346 (2%)
Query: 574 KNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGD 633
+N + +VQQQ+G +VR IA G ++G++R VV+TG PI PVG TLGRI+NVLG
Sbjct: 36 ENGTLVLEVQQQLGGGVVRGIAMGTSDGLRRGLSVVNTGNPIQVPVGTETLGRIVNVLGQ 95
Query: 634 PIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGV 693
PID G+I K++ IH P + +Q +LETG+KVIDL+CPF KGGKIGLFGGAGV
Sbjct: 96 PIDECGDIGEKERYSIHREAPSYEDQSNATELLETGVKVIDLICPFAKGGKIGLFGGAGV 155
Query: 694 GKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIY 746
GKTVNMMELI NIAI+H G SVF GVGER+REGNDFY+EM+E+ V++ KV+++Y
Sbjct: 156 GKTVNMMELINNIAIQHSGLSVFAGVGERTREGNDFYYEMQEAGVVNVEKPEESKVAMVY 215
Query: 747 GQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVG 806
GQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVG
Sbjct: 216 GQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVG 275
Query: 807 YQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIA 866
YQPTLAEEMG LQERI+STK+G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA
Sbjct: 276 YQPTLAEEMGVLQERITSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIA 335
Query: 867 ELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LG+YPAIDPL+S S+ LDP +VG+EHY +A V+ LQ+YKELKD
Sbjct: 336 SLGLYPAIDPLDSTSRMLDPLVVGQEHYDIARGVQSTLQRYKELKD 381
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 144/342 (42%), Gaps = 40/342 (11%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T ++PVG E LGRIVN G+ ID K R ++ + AP D+
Sbjct: 63 GLRRGLSVVNTGNPIQVPVGTETLGRIVNVLGQPIDECGDIGEKERYSIHREAPSYEDQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TG+K ID + P KG + + G GKT ++ I N + + ++ +G
Sbjct: 123 NATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAIQHSGLSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGE 342
++ + YY + VV +S Q P TG T+ E
Sbjct: 183 ERTREGNDF-----YYEMQEAGVVNVEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAE 237
Query: 343 YFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKY 402
FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 238 KFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL--- 287
Query: 403 FLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAIN 462
+++I + +G++T+ + D+T P + D + L + + PAI+
Sbjct: 288 ---QERITSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPAID 344
Query: 463 VGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESF 499
S SR V G Y I + ++ L +Y+EL+
Sbjct: 345 PLDSTSRMLDPLVVGQEHYDIARG----VQSTLQRYKELKDI 382
>gi|257095878|ref|YP_003169519.1| ATP synthase F1 subunit alpha [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257048402|gb|ACV37590.1| ATP synthase F1, alpha subunit [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 512
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 228/391 (58%), Positives = 305/391 (78%), Gaps = 2/391 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++G T +I E+P+G ELLGR+VNS G+ ID K K + +EK+
Sbjct: 73 AVVLGEYDQISEGDTVKTTGRILEVPIGPELLGRVVNSLGQPIDGKGPLNHKLTDKIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KSID+M+PIG+GQRELIIGDRQTGKT +A+DTIINQK +N+I
Sbjct: 133 APGVIWRKSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGKTAVAVDTIINQKGQNLI 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK S++ NV+ KL+ M+YT+VVAATA++SAA QYI+PY+GCT+GEYFRD
Sbjct: 193 CIYVAVGQKASTVANVVRKLEENGAMEYTIVVAATASESAALQYIAPYSGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LIIYDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER++++++ ++EK
Sbjct: 253 GQDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVSEEWVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA P+IET GDV++F+PTNVISITDGQIFLDT+LFN+ RPAI+ G+
Sbjct: 313 TNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLDTDLFNAGVRPAIDAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKL G +R+ LAQYREL +F++F+SDLD T+ QL G ++ LMK
Sbjct: 373 SVSRVGGAAQTKVIKKLGGGVRLALAQYRELAAFAQFASDLDEATRKQLDRGRLVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQ 556
Q + S+ E+ I L + F + +K+
Sbjct: 433 QPQYSPLSVSEMAITLHAVNKGLFDDVEVKK 463
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 154/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G + I V TG+ + P+G LGR++N LG PID KG +N K I
Sbjct: 71 VGAVVLGEYDQISEGDTVKTTGRILEVPIGPELLGRVVNSLGQPIDGKGPLNHKLTDKIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GKT ++ I N ++
Sbjct: 131 KVAPGVIWRKSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGKTAVAVDTIINQKGQN 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ VG+++ + +++E+ ++ ++ +E + + +G ++ E F
Sbjct: 191 LIC-IYVAVGQKASTVANVVRKLEENGAMEYTIVVAATASESAALQYIAPYSGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A +VS +L R P Y + +L ER +
Sbjct: 250 RDRGQDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVSEEWV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + G+ PAID
Sbjct: 310 EKFTNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLDTDLFNAGVRPAID 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G KV + V+ L +Y+EL
Sbjct: 370 AGISVSR-----VGGAAQTKVIKKLGGGVRLALAQYREL 403
>gi|187931018|ref|YP_001891002.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
mediasiatica FSC147]
gi|226739888|sp|B2SEX9.1|ATPA_FRATM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|187711927|gb|ACD30224.1| ATP synthase, F1 sector, subunit alpha [Francisella tularensis
subsp. mediasiatica FSC147]
Length = 513
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/396 (58%), Positives = 304/396 (76%), Gaps = 2/396 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++ +G K +CT +I E+PVG LLGR+V++ G ID K + +EKI
Sbjct: 73 AVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEVATDLTSPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++ L TGIKSIDSM+PIG+GQRELIIGDRQ GKT IA+DTIINQK V
Sbjct: 133 APGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTIINQKGTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S++ N++ +L+ + M++T++VAATA+DSAA QYI+PY GC++GEYFRD
Sbjct: 193 CIYVAIGQKASTIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N+ ++EK
Sbjct: 253 GQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GD+++F+PTNVISITDGQIFL+T+LFNS RPAIN G
Sbjct: 313 TNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRPAINPGN 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQYRELE+FS+F+SDLD T+ QL G++++ L+K
Sbjct: 373 SVSRVGGAAQTKIIKKLGGGIRLALAQYRELEAFSQFASDLDEATRAQLNRGQRVTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFE 561
QK S+ + + L N + + + ++ FE
Sbjct: 433 QKQFSTLSVALMALSLYAADNGYLDNLEVSEVIPFE 468
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 158/343 (46%), Gaps = 31/343 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ IK TG+ + PVG+ LGR+++ LG+PID KGE+ + SPI
Sbjct: 71 VGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEVATDLTSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TGIK ID + P +G + + G +GKT ++ I I
Sbjct: 131 KIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTI----INQ 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ +G+++ + +++E ++ ++ ++ + + G S+
Sbjct: 187 KGTGVKCIYVAIGQKASTIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 247 EYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNE 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + G+ P
Sbjct: 307 EYVEKFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKELK 911
AI+P S S+ + G K+ + ++ L +Y+EL+
Sbjct: 367 AINPGNSVSR-----VGGAAQTKIIKKLGGGIRLALAQYRELE 404
>gi|333368567|ref|ZP_08460747.1| ATP synthase F1 sector alpha subunit [Psychrobacter sp. 1501(2011)]
gi|332976827|gb|EGK13653.1| ATP synthase F1 sector alpha subunit [Psychrobacter sp. 1501(2011)]
Length = 514
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/403 (57%), Positives = 305/403 (75%), Gaps = 2/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D L +GQK +CT +I E+PVG ELLGR+V++ G ID K K + VEKI
Sbjct: 74 AVVLGDYLGLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDGKGPINAKLTDKVEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV+EP++TG K++D+MIPIG+GQRELIIGDRQTGKT +AID II QK +
Sbjct: 134 APGVIARQSVDEPVMTGYKAVDTMIPIGRGQRELIIGDRQTGKTALAIDAIIAQKTSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ + YT VV A+A++ AA QYI+PY+GCT+GEYFRD
Sbjct: 194 CVYVAIGQKRSTIANVVRKLEESGALAYTTVVVASASEPAALQYIAPYSGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++E+
Sbjct: 254 GEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNAAYVEEF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+++LFNS RPA+N G+
Sbjct: 314 TNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESSLFNSGIRPAVNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKLSG IR LAQYREL +F++F+SDLD TK QL +GE+++ LMK
Sbjct: 374 SVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFAQFASDLDDATKQQLDHGERVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
QK + S+ E ++ + IP+++I +E ++Y
Sbjct: 434 QKQYAPMSVAEQAAVIYASNEGYLSDIPVEKIGAWEAAYLRYM 476
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 158/343 (46%), Gaps = 27/343 (7%)
Query: 588 ENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKS 647
++ V + G+ G++ TG+ + PVG LGR+++ LG+PID KG IN+K
Sbjct: 69 QDSVGAVVLGDYLGLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDGKGPINAKLTD 128
Query: 648 PIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIA 707
+ + P + + + TG K +D + P +G + + G GKT ++ I IA
Sbjct: 129 KVEKIAPGVIARQSVDEPVMTGYKAVDTMIPIGRGQRELIIGDRQTGKTALAIDAI--IA 186
Query: 708 IEHKGCS-VFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSI 766
+ G V++ +G++ + +++ES L +++ +EP+ + +G ++
Sbjct: 187 QKTSGIKCVYVAIGQKRSTIANVVRKLEESGALAYTTVVVASASEPAALQYIAPYSGCTM 246
Query: 767 AEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST- 825
E FR+ G+D L+ D++ + +A ++S +L R P Y + +L ER S
Sbjct: 247 GEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVN 306
Query: 826 --------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIY 871
+ G++T++ I A D++ P+ + D I L + GI
Sbjct: 307 AAYVEEFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESSLFNSGIR 366
Query: 872 PAIDPLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
PA++ S S+ + G K+ + ++ L +Y+EL
Sbjct: 367 PAVNAGISVSR-----VGGAAQTKIIKKLSGGIRTALAQYREL 404
>gi|385793620|ref|YP_005826596.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|332678945|gb|AEE88074.1| ATP synthase alpha chain [Francisella cf. novicida Fx1]
Length = 513
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/396 (58%), Positives = 304/396 (76%), Gaps = 2/396 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++ +G K +CT +I E+PVG LLGR+V++ G ID K + +EKI
Sbjct: 73 AVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEVATDLTSPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++ L TGIKSIDSM+PIG+GQRELIIGDRQ GKT IA+DTIINQK V
Sbjct: 133 APGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTIINQKGTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S++ N++ +L+ + M++T++VAATA+DSAA QYI+PY GC++GEYFRD
Sbjct: 193 CIYVAIGQKASTIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N+ ++EK
Sbjct: 253 GQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GD+++F+PTNVISITDGQIFL+T+LFNS RPAIN G
Sbjct: 313 TNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRPAINPGN 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQYRELE+FS+F+SDLD T+ QL G++++ L+K
Sbjct: 373 SVSRVGGAAQTKIIKKLGGGIRLALAQYRELEAFSQFASDLDEATRAQLNRGQRVTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFE 561
QK S+ + + L N + + + ++ FE
Sbjct: 433 QKQFSTLSVALMALSLYAADNGYLDNLEVPEVIPFE 468
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 158/343 (46%), Gaps = 31/343 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ IK TG+ + PVG+ LGR+++ LG+PID KGE+ + SPI
Sbjct: 71 VGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEVATDLTSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TGIK ID + P +G + + G +GKT ++ I I
Sbjct: 131 KIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTI----INQ 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ +G+++ + +++E ++ ++ ++ + + G S+
Sbjct: 187 KGTGVKCIYVAIGQKASTIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 247 EYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNE 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + G+ P
Sbjct: 307 EYVEKFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKELK 911
AI+P S S+ + G K+ + ++ L +Y+EL+
Sbjct: 367 AINPGNSVSR-----VGGAAQTKIIKKLGGGIRLALAQYRELE 404
>gi|296112610|ref|YP_003626548.1| ATP synthase F1 beta subunit [Moraxella catarrhalis RH4]
gi|416155975|ref|ZP_11604268.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 101P30B1]
gi|416217019|ref|ZP_11623968.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 7169]
gi|416220313|ref|ZP_11625405.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 103P14B1]
gi|416228557|ref|ZP_11627711.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 46P47B1]
gi|416237232|ref|ZP_11630749.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis BC1]
gi|416242064|ref|ZP_11633198.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis BC7]
gi|416247176|ref|ZP_11635482.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis BC8]
gi|416249973|ref|ZP_11636982.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis CO72]
gi|416254032|ref|ZP_11638489.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis O35E]
gi|421779431|ref|ZP_16215923.1| ATP synthase F1 beta subunit [Moraxella catarrhalis RH4]
gi|295920304|gb|ADG60655.1| ATP synthase F1 beta subunit [Moraxella catarrhalis BBH18]
gi|326560870|gb|EGE11235.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 7169]
gi|326563892|gb|EGE14143.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 46P47B1]
gi|326566901|gb|EGE17040.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 103P14B1]
gi|326569769|gb|EGE19819.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis BC8]
gi|326570800|gb|EGE20825.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis BC1]
gi|326571625|gb|EGE21640.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis BC7]
gi|326575096|gb|EGE25024.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis CO72]
gi|326576818|gb|EGE26725.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 101P30B1]
gi|326577729|gb|EGE27605.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis O35E]
gi|407813141|gb|EKF83923.1| ATP synthase F1 beta subunit [Moraxella catarrhalis RH4]
Length = 473
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/370 (63%), Positives = 292/370 (78%), Gaps = 14/370 (3%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ + F +++ + +VQQQ+G+ +VRTIA G+T G+KR V ++G PI
Sbjct: 15 VEFSRGDVPQIFDALHVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLPVSNSGAPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G +N+++K IH P + Q + +LETGIKVIDLL
Sbjct: 75 VPVGQATLGRIMDVLGRPIDEAGPVNAEQKWSIHREAPSYDEQSNSTELLETGIKVIDLL 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA++H G SVF GVGER+REGNDFYHEM+E+
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYHEMQEA 194
Query: 737 NVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS-------GKDVLLFID 782
V++ KV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+D
Sbjct: 195 GVVNTEDFTQSKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDEATGKGRDVLLFVD 254
Query: 783 NIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADD 842
NIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+ST++G+ITSVQA+YVPADD
Sbjct: 255 NIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGLLQERITSTQSGSITSVQAVYVPADD 314
Query: 843 LTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKF 902
LTDPSP+TTF HLD+T+VLSR IA GIYPA+DPL+S S+QLDP ++GEEHY VA V+
Sbjct: 315 LTDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDSTSRQLDPQVIGEEHYSVARGVQE 374
Query: 903 YLQKYKELKD 912
LQ+YKELKD
Sbjct: 375 VLQRYKELKD 384
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 154/360 (42%), Gaps = 39/360 (10%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + + ++ + AP ++ + E L TGIK ID +
Sbjct: 75 VPVGQATLGRIMDVLGRPIDEAGPVNAEQKWSIHREAPSYDEQSNSTELLETGIKVIDLL 134
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCIGQKI---SSLINVINKL 307
P KG + + G GKT ++ I N K+ + ++ +G++ + + + +
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYHEMQEA 194
Query: 308 KYYNCMDYT----VVVAATAADSAAEQYISPYTGCTIGEYFRD-------LGQDCLIIYD 356
N D+T +V + + TG T+ EYFRD G+D L+ D
Sbjct: 195 GVVNTEDFTQSKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDEATGKGRDVLLFVD 254
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P V Y + + + L +++I + +G+
Sbjct: 255 NIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGLLQERITSTQSGS 301
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VG 471
+T+ + D+T P + D + L ++ + PA++ S SR V
Sbjct: 302 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDSTSRQLDPQVI 361
Query: 472 GAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
G Y + + ++ +L +Y+EL+ +L K +Y KI + Q H
Sbjct: 362 GEEHYSVARG----VQEVLQRYKELKDIIAILGMDELSEEDKLVVYRARKIQRFLSQPFH 417
>gi|94501604|ref|ZP_01308121.1| ATP synthase F1, alpha subunit [Bermanella marisrubri]
gi|94426287|gb|EAT11278.1| ATP synthase F1, alpha subunit [Oceanobacter sp. RED65]
Length = 514
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 226/404 (55%), Positives = 303/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+++ D L +GQK CT +I E+P G ELLGR+V++ G ID K K +E+I
Sbjct: 74 AIVLGDYLGLAEGQKARCTGRILEVPTGPELLGRVVDALGNPIDGKGPIEAKQTTPIERI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+ V++P+ TG K++D+M+PIG+GQRELIIGDRQTGKT +A+D IINQKN +
Sbjct: 134 APGVIARQGVDQPVQTGYKAVDAMVPIGRGQRELIIGDRQTGKTALAVDAIINQKNSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK SS+ NV+ KL+ + MD T++VAA+A+D A+ QY+S Y GC +GEYFRD
Sbjct: 194 CVYVAIGQKQSSIANVVRKLEEHGAMDNTIIVAASASDPASMQYLSAYAGCAMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTK AWAYRQISLLL+RPPGREA+PGDVFYLHSRLLER++++N ++E+
Sbjct: 254 GEDALIIYDDLTKQAWAYRQISLLLKRPPGREAYPGDVFYLHSRLLERAARVNAEYVEQF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+TNLFNS RPA+N G+
Sbjct: 314 TNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETNLFNSGIRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+ KL G IR+ LAQYREL +F++F+SDLD T+ QL +G+ ++ LMK
Sbjct: 374 SVSRVGGAAQTKIISKLGGGIRLALAQYRELAAFAQFASDLDDATREQLEHGKTVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK + S+ E+ I+L + + +++I FE ++ Y +
Sbjct: 434 QKQYAPMSVAEMAIMLFAANEGYLKDVAVEKIADFEAALLSYAK 477
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 155/342 (45%), Gaps = 25/342 (7%)
Query: 588 ENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKS 647
++ V I G+ G+ TG+ + P G LGR+++ LG+PID KG I +K+ +
Sbjct: 69 QDSVGAIVLGDYLGLAEGQKARCTGRILEVPTGPELLGRVVDALGNPIDGKGPIEAKQTT 128
Query: 648 PIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIA 707
PI + P + + ++TG K +D + P +G + + G GKT ++ I N
Sbjct: 129 PIERIAPGVIARQGVDQPVQTGYKAVDAMVPIGRGQRELIIGDRQTGKTALAVDAIINQK 188
Query: 708 IEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
C V++ +G++ + +++E +D ++ ++P+ + A G ++
Sbjct: 189 NSGIKC-VYVAIGQKQSSIANVVRKLEEHGAMDNTIIVAASASDPASMQYLSAYAGCAMG 247
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 248 EYFRDRGEDALIIYDDLTKQAWAYRQISLLLKRPPGREAYPGDVFYLHSRLLERAARVNA 307
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I D++ P+ + D I L + GI P
Sbjct: 308 EYVEQFTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETNLFNSGIRP 367
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
A++ S S+ + G K+ ++ ++ L +Y+EL
Sbjct: 368 AMNAGISVSR-----VGGAAQTKIISKLGGGIRLALAQYREL 404
>gi|269103803|ref|ZP_06156500.1| ATP synthase beta chain [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268163701|gb|EEZ42197.1| ATP synthase beta chain [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 468
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/339 (68%), Positives = 281/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G ++G++R V +TG+PI PVG TLGRI+NVLGD ID +G+
Sbjct: 43 EVQQQLGGGVVRGIAMGTSDGLRRGLSVENTGRPIEVPVGTATLGRIMNVLGDAIDERGD 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q +LETG+KVIDL+CPF KGGKIGLFGGAGVGKTVNMM
Sbjct: 103 IGEEERYAIHRAAPSYEEQSNTTEMLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIAI+H G SVF GVGER+REGNDFY EM+E+ V++ KV+++YGQMNEP
Sbjct: 163 ELINNIAIQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVENPAESKVAMVYGQMNEPP 222
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 223 GNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 282
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK+G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LG+YPA
Sbjct: 283 EMGVLQERITSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPA 342
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IDPL+S S+ LDP +VG+EHY +A V+ LQ+YKELKD
Sbjct: 343 IDPLDSTSRMLDPLVVGQEHYDIARGVQSILQRYKELKD 381
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 159/370 (42%), Gaps = 46/370 (12%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T + E+PVG LGRI+N G+ ID + + R + + AP ++
Sbjct: 63 GLRRGLSVENTGRPIEVPVGTATLGRIMNVLGDAIDERGDIGEEERYAIHRAAPSYEEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TG+K ID + P KG + + G GKT ++ I N + + ++ +G
Sbjct: 123 NTTEMLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAIQHSGLSVFAGVG 182
Query: 295 QKI------------SSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGE 342
++ + ++NV N + M Y + + TG T+ E
Sbjct: 183 ERTREGNDFYFEMQEAGVVNVENPAESKVAMVY-----GQMNEPPGNRLRVALTGLTMAE 237
Query: 343 YFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKY 402
FRD G+D L+ D++ ++ A ++S LL R P V Y + + +
Sbjct: 238 KFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEM 284
Query: 403 FLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAIN 462
+ +++I + +G++T+ + D+T P + D + L + + PAI+
Sbjct: 285 GVLQERITSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPAID 344
Query: 463 VGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNG 517
S SR V G Y I + ++ +L +Y+EL+ + I+ +L
Sbjct: 345 PLDSTSRMLDPLVVGQEHYDIARG----VQSILQRYKELKDI------IAILGMDELSED 394
Query: 518 EKISLLMKQK 527
+K+S+ +K
Sbjct: 395 DKLSVSRARK 404
>gi|160871653|ref|ZP_02061785.1| ATP synthase F1, alpha subunit [Rickettsiella grylli]
gi|159120452|gb|EDP45790.1| ATP synthase F1, alpha subunit [Rickettsiella grylli]
Length = 514
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/404 (57%), Positives = 308/404 (76%), Gaps = 4/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D + L++GQ CT +I E+PVG LLGR+VN+ G ID + + + +E+I
Sbjct: 74 AVVLGDYEGLSEGQTVKCTGRILEVPVGEALLGRVVNALGHPIDGRGTIETEKKSPIEQI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++PL TGI +IDSM+PIG+GQRELIIGDRQTGKT +AID IINQK+ V
Sbjct: 134 APGVIWRQSVSQPLQTGILAIDSMVPIGRGQRELIIGDRQTGKTALAIDAIINQKDTGVK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ V+ KL+ + + +T++++A AADSAA Q+I+PY GC +GEYFRD
Sbjct: 194 CIYVAIGQKASSIAAVVRKLEEQDALKHTIIISANAADSAALQFIAPYAGCAMGEYFRDQ 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D LIIYDDLTK AWAYRQISLLLRRPPGREA+PGD+FYLHSRLLER++++N+ F+EK
Sbjct: 254 GEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDIFYLHSRLLERAARVNEAFVEKA 313
Query: 408 ---KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVG 464
++ K G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPAIN G
Sbjct: 314 TNGRVKGK-TGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAINAG 372
Query: 465 LSVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLM 524
LSVSRVG AAQ KI+KKL G +R+ LAQYREL +FS+F SDLD VT+ QL G++++ ++
Sbjct: 373 LSVSRVGSAAQTKIIKKLGGGVRLSLAQYRELAAFSQFMSDLDEVTRKQLERGQRVTEIL 432
Query: 525 KQKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
KQK + S+ E+ ++L + + I + +I F ++ Y
Sbjct: 433 KQKQYSPLSVAEMAVLLFAVDKGYLDDIELTKIVAFSEGLLAYM 476
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 152/340 (44%), Gaps = 27/340 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ G+ V TG+ + PVG+ LGR++N LG PID +G I ++KKSPI
Sbjct: 72 VGAVVLGDYEGLSEGQTVKCTGRILEVPVGEALLGRVVNALGHPIDGRGTIETEKKSPIE 131
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TGI ID + P +G + + G GKT ++ I N
Sbjct: 132 QIAPGVIWRQSVSQPLQTGILAIDSMVPIGRGQRELIIGDRQTGKTALAIDAIINQKDTG 191
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ +++E + L +I + + + G ++ E F
Sbjct: 192 VKC-IYVAIGQKASSIAAVVRKLEEQDALKHTIIISANAADSAALQFIAPYAGCAMGEYF 250
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 251 RDQGEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDIFYLHSRLLERAARVNEAFV 310
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 311 EKATNGRVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAIN 370
Query: 876 PLESYSKQLDPYIVGEEHY-----KVANEVKFYLQKYKEL 910
S S+ VG K+ V+ L +Y+EL
Sbjct: 371 AGLSVSR------VGSAAQTKIIKKLGGGVRLSLAQYREL 404
>gi|398808389|ref|ZP_10567253.1| ATP synthase, F1 beta subunit [Variovorax sp. CF313]
gi|398087705|gb|EJL78287.1| ATP synthase, F1 beta subunit [Variovorax sp. CF313]
Length = 466
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/366 (63%), Positives = 288/366 (78%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + K + + + + +VQQQ+G+ +VRTIA G+++G++R IV +TG
Sbjct: 13 VVDVEFPRDQMPKVYDALKFEGSALTLEVQQQLGDGVVRTIALGSSDGLRRGIIVKNTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG PID +G + + + IH P + + ++LETGIKVI
Sbjct: 73 PITVPVGKATLGRIMDVLGAPIDERGPVGQELTASIHRKAPAYDELSPSQDLLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
+S V++ KV+++YGQMNEP GNRLRVALTGL+IAE FR+ G+DVL F+DNIYR
Sbjct: 193 ADSGVVNLEKLEDSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYR 252
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 253 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDP 312
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLDST+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY VA V+ LQ+
Sbjct: 313 SPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGEEHYNVARAVQGTLQR 372
Query: 907 YKELKD 912
YKEL+D
Sbjct: 373 YKELRD 378
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 132/323 (40%), Gaps = 40/323 (12%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + + ++ + AP + + L TGIK ID +
Sbjct: 76 VPVGKATLGRIMDVLGAPIDERGPVGQELTASIHRKAPAYDELSPSQDLLETGIKVIDLV 135
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K + + ++ +G++ + Y+
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDF-----YH 190
Query: 311 NCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGEYFRDLGQDCLIIYDDL 358
D VV DS Q P TG TI E FRD G+D L D++
Sbjct: 191 EMADSGVVNLEKLEDSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNI 250
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P + + RL ER I + G++T
Sbjct: 251 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKVGSIT 297
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L ++ + PA++ S SR V G
Sbjct: 298 SIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGE 357
Query: 474 AQYKIVKKLSGDIRIMLAQYREL 496
Y + + + G L +Y+EL
Sbjct: 358 EHYNVARAVQG----TLQRYKEL 376
>gi|260222684|emb|CBA32489.1| ATP synthase subunit beta 1 [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 471
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/339 (68%), Positives = 279/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G+++G++R IV +T KPI+ PVG TLGRI++VLG PID +G
Sbjct: 46 EVQQQLGDGIVRTIALGSSDGLRRGMIVSNTEKPIMVPVGQATLGRIMDVLGAPIDERGP 105
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ S+ + IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 106 VASELTASIHRKAPTYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 165
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA H G SVF GVGER+REGNDFYHEM +S V++ KV+++YGQMNEP
Sbjct: 166 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADSGVVNLEDLPKSKVAMVYGQMNEPP 225
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL+IAE FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 226 GNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 285
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA
Sbjct: 286 EMGRLQERITSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPA 345
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP +VGEEHY A V+ LQ+YKEL+D
Sbjct: 346 VDPLDSTSRQLDPNVVGEEHYNTARAVQGTLQRYKELRD 384
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 138/339 (40%), Gaps = 40/339 (11%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G TEK +PVG LGRI++ G ID + + ++ + AP +
Sbjct: 66 GLRRGMIVSNTEKPIMVPVGQATLGRIMDVLGAPIDERGPVASELTASIHRKAPTYDELS 125
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 126 PSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 185
Query: 295 QKI------------SSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGE 342
++ S ++N+ + K M Y + + TG TI E
Sbjct: 186 ERTREGNDFYHEMADSGVVNLEDLPKSKVAMVY-----GQMNEPPGNRLRVALTGLTIAE 240
Query: 343 YFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKY 402
FRD G+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 241 SFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------- 293
Query: 403 FLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAIN 462
I + G++T+ + D+T P + D + L ++ + PA++
Sbjct: 294 ------ITSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVD 347
Query: 463 VGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
S SR V G Y + + G L +Y+EL
Sbjct: 348 PLDSTSRQLDPNVVGEEHYNTARAVQG----TLQRYKEL 382
>gi|406903531|gb|EKD45579.1| hypothetical protein ACD_69C00222G0001, partial [uncultured
bacterium]
Length = 470
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/405 (60%), Positives = 319/405 (78%), Gaps = 4/405 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ ++L +GQ CT K+ +PVG ELLGR+VNS GE IDN+ K+ +EKI
Sbjct: 28 AVILGASEHLQEGQTVRCTGKVLSVPVGRELLGRVVNSLGEPIDNRGPIKTKSFSPIEKI 87
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++PL TGIK+ID+MIPIG GQRELIIGDRQTGKT IAIDTIINQKN V
Sbjct: 88 APGVISRKSVDQPLQTGIKAIDAMIPIGLGQRELIIGDRQTGKTAIAIDTIINQKNTGVK 147
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SSL N++ KL+ ++ MD+T++VAATAADSAA+QYI+ Y+GC +GEYFRD
Sbjct: 148 CIYVAIGQKSSSLANIMYKLEEHDAMDHTIIVAATAADSAAQQYIAAYSGCAMGEYFRDN 207
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTKHAWAYRQISLLLRRPPGREA+PGD+FYLHSRLLERS+++N+ ++EK
Sbjct: 208 GEDALIIYDDLTKHAWAYRQISLLLRRPPGREAYPGDIFYLHSRLLERSARVNEAYVEKF 267
Query: 407 --KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVG 464
K+ NK G+LTA PI+ET GDV+SFIPTN+ISITDGQIFL+T+LFN+ RPAIN G
Sbjct: 268 TQGKVKNK-TGSLTALPIVETQAGDVSSFIPTNIISITDGQIFLETDLFNAGSRPAINAG 326
Query: 465 LSVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLM 524
LSVSRVGGAAQ KI+KKL G +R+ LAQYRELE+F++F+S+L+ T+ QL +G++ ++
Sbjct: 327 LSVSRVGGAAQTKIIKKLGGGLRLALAQYRELEAFAQFASELEETTRKQLDHGQRAVEIL 386
Query: 525 KQKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
KQ ++ ++ I L +I+ + + ++ FE I +YF+
Sbjct: 387 KQGRFNPLTVAQMAISLFLIEKELLHDVALNKVIEFEQQIHRYFQ 431
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 158/338 (46%), Gaps = 25/338 (7%)
Query: 593 TIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTL 652
+ G + ++ V TGK + PVG LGR++N LG+PIDN+G I +K SPI +
Sbjct: 28 AVILGASEHLQEGQTVRCTGKVLSVPVGRELLGRVVNSLGEPIDNRGPIKTKSFSPIEKI 87
Query: 653 PPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKG 712
P ++ + L+TGIK ID + P G + + G GKT ++ I N
Sbjct: 88 APGVISRKSVDQPLQTGIKAIDAMIPIGLGQRELIIGDRQTGKTAIAIDTIINQKNTGVK 147
Query: 713 CSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRN 772
C +++ +G++S + ++++E + +D ++ + + + A +G ++ E FR+
Sbjct: 148 C-IYVAIGQKSSSLANIMYKLEEHDAMDHTIIVAATAADSAAQQYIAAYSGCAMGEYFRD 206
Query: 773 SGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST------- 825
+G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 207 NGEDALIIYDDLTKHAWAYRQISLLLRRPPGREAYPGDIFYLHSRLLERSARVNEAYVEK 266
Query: 826 --------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPL 877
K G++T++ + A D++ P+ + D I L + G PAI+
Sbjct: 267 FTQGKVKNKTGSLTALPIVETQAGDVSSFIPTNIISITDGQIFLETDLFNAGSRPAINAG 326
Query: 878 ESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKELK 911
S S+ + G K+ + ++ L +Y+EL+
Sbjct: 327 LSVSR-----VGGAAQTKIIKKLGGGLRLALAQYRELE 359
>gi|254788504|ref|YP_003075933.1| F0F1 ATP synthase subunit beta [Teredinibacter turnerae T7901]
gi|259585454|sp|C5BKJ5.1|ATPB_TERTT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|237687362|gb|ACR14626.1| ATP synthase F1, beta subunit [Teredinibacter turnerae T7901]
Length = 470
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/339 (68%), Positives = 279/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVR IA G++ G+ RN V TG P+ PVG+ TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGIVRCIAMGSSEGLSRNLEVTGTGAPVSVPVGNETLGRIMDVLGNPIDECGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ PIH P + ++LETG+KVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEQERMPIHRKAPAYDELSSTTDLLETGVKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA+EH G SVF GVGER+REGNDFYHEM+ES V++ KV+++YGQMNEP
Sbjct: 160 ELINNIALEHSGLSVFAGVGERTREGNDFYHEMQESGVVNVENFKESKVAMVYGQMNEPP 219
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 220 GNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 279
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLDST+VLSR IA GIYPA
Sbjct: 280 EMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPA 339
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IDPL+S S+QLDP ++G EHY VA V+ LQ+YKELKD
Sbjct: 340 IDPLDSTSRQLDPLVIGAEHYDVARGVQSVLQRYKELKD 378
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 145/341 (42%), Gaps = 40/341 (11%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L++ + T +PVG E LGRI++ G ID + R + + AP +
Sbjct: 59 EGLSRNLEVTGTGAPVSVPVGNETLGRIMDVLGNPIDECGPIGEQERMPIHRKAPAYDEL 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
S + L TG+K ID + P KG + + G GKT ++ I N + + ++ +
Sbjct: 119 SSTTDLLETGVKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIALEHSGLSVFAGV 178
Query: 294 GQKI------------SSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIG 341
G++ S ++NV N + M Y + + TG T+
Sbjct: 179 GERTREGNDFYHEMQESGVVNVENFKESKVAMVY-----GQMNEPPGNRLRVALTGLTMA 233
Query: 342 EYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINK 401
E FRD G+D L+ D++ ++ A ++S LL R P V Y + + +
Sbjct: 234 EKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEE 280
Query: 402 YFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAI 461
+ +++I + G++T+ + D+T P + D + L ++ PAI
Sbjct: 281 MGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAI 340
Query: 462 NVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
+ S SR V GA Y + + ++ +L +Y+EL+
Sbjct: 341 DPLDSTSRQLDPLVIGAEHYDVARG----VQSVLQRYKELK 377
>gi|430762966|ref|YP_007218823.1| ATP synthase alpha chain [Thioalkalivibrio nitratireducens DSM
14787]
gi|430012590|gb|AGA35342.1| ATP synthase alpha chain [Thioalkalivibrio nitratireducens DSM
14787]
Length = 513
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/404 (57%), Positives = 303/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D K++T+G CT +I E+PVG LLGR+V+S G ID K +EKI
Sbjct: 73 AVVLGDYKHITEGDTVRCTGRILEVPVGPGLLGRVVDSLGRPIDGKGPVTTDLTAPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG+++R+SV++PL TG+K+IDSM+PIG+GQRELIIGDRQTGKT +AID IINQ V
Sbjct: 133 APGVIERQSVSQPLQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAVAIDAIINQIGSGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK SS+ NV+ +L+ M++T++VAA A++SAA Q+I+PY+GC++GEYFRD
Sbjct: 193 CIYVAVGQKASSVANVVRRLEDAGAMEHTIIVAANASESAAMQFIAPYSGCSMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++E+
Sbjct: 253 GEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERASRVNPEYVEQF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN GL
Sbjct: 313 THGEVTGRTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGL 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G +R+ LAQYREL +FS+F+SDLD +T+ QL G++++ LMK
Sbjct: 373 SVSRVGGAAQTKIIKKLGGGVRLALAQYRELAAFSQFASDLDELTRKQLDRGKRVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q SI E+ L F + QI FE ++ Y R
Sbjct: 433 QGQFSPLSIGEMAFSLFAANEGFLDDVDADQIVRFEKALLDYVR 476
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 153/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ I V TG+ + PVG LGR+++ LG PID KG + + +PI
Sbjct: 71 VGAVVLGDYKHITEGDTVRCTGRILEVPVGPGLLGRVVDSLGRPIDGKGPVTTDLTAPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TG+K ID + P +G + + G GKT ++ I N
Sbjct: 131 KIAPGVIERQSVSQPLQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAVAIDAIINQIGSG 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ VG+++ + ++++ ++ ++ +E + + +G S+ E F
Sbjct: 191 VKC-IYVAVGQKASSVANVVRRLEDAGAMEHTIIVAANASESAAMQFIAPYSGCSMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERIS------- 823
R+ G+D L+ D++ + A +VS +L R P Y + +L ER S
Sbjct: 250 RDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERASRVNPEYV 309
Query: 824 --------STKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
+ + G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 310 EQFTHGEVTGRTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G K+ + V+ L +Y+EL
Sbjct: 370 AGLSVSR-----VGGAAQTKIIKKLGGGVRLALAQYREL 403
>gi|152980404|ref|YP_001355317.1| ATP synthase F0F1 subunit beta [Janthinobacterium sp. Marseille]
gi|166201713|sp|A6T470.1|ATPB_JANMA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|151280481|gb|ABR88891.1| F-type H+-transporting ATPase beta chain [Janthinobacterium sp.
Marseille]
Length = 466
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 228/339 (67%), Positives = 279/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G ++G++R I+ +TG PI PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGIVRTIALGTSDGLRRGMIIQNTGNPITVPVGTATLGRIMDVLGNPIDECGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
++ ++ + IH P + + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 VSHERTASIHRKAPAYDELSPSQDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA H G SVF GVGER+REGNDFYHEM ++ V+D KV+++YGQMNEP
Sbjct: 160 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADAKVVDLENPANSKVAMVYGQMNEPP 219
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE FR+ GKDVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 220 GNRLRVALTGLTMAEAFRDEGKDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAE 279
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA
Sbjct: 280 EMGRLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPA 339
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP +VG++HY A V+ LQ+YKEL+D
Sbjct: 340 VDPLDSTSRQLDPLVVGQDHYDTARAVQGTLQRYKELRD 378
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 130/323 (40%), Gaps = 40/323 (12%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + ++ + AP + + L TGIK ID +
Sbjct: 76 VPVGTATLGRIMDVLGNPIDECGPVSHERTASIHRKAPAYDELSPSQDLLETGIKVIDLV 135
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K + + ++ +G++ + Y+
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDF-----YH 190
Query: 311 NCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGEYFRDLGQDCLIIYDDL 358
D VV A+S Q P TG T+ E FRD G+D L D++
Sbjct: 191 EMADAKVVDLENPANSKVAMVYGQMNEPPGNRLRVALTGLTMAEAFRDEGKDVLFFVDNI 250
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
+ A ++S LL R P + + RL ER I + G++T
Sbjct: 251 YRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKTGSIT 297
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L ++ + PA++ S SR V G
Sbjct: 298 SIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGQ 357
Query: 474 AQYKIVKKLSGDIRIMLAQYREL 496
Y + + G L +Y+EL
Sbjct: 358 DHYDTARAVQG----TLQRYKEL 376
>gi|332529015|ref|ZP_08404981.1| F0F1 ATP synthase subunit alpha [Hylemonella gracilis ATCC 19624]
gi|332041565|gb|EGI77925.1| F0F1 ATP synthase subunit alpha [Hylemonella gracilis ATCC 19624]
Length = 517
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/422 (54%), Positives = 313/422 (74%), Gaps = 8/422 (1%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++++G CT +I E+PVG EL+GR+VN+ G+ ID K K + +EK+
Sbjct: 78 AVILGEYEHISEGDTVKCTGRILEVPVGPELVGRVVNALGQPIDGKGPINAKMTDVIEKV 137
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KSID+M+P+G+GQRELIIGDRQTGKT +AID IINQK +N+
Sbjct: 138 APGVIARQSVDQPMQTGLKSIDAMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQNMT 197
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ NV+ L+ M YT+VVAATA++SAA QY+S Y+GCT+GEYFRD
Sbjct: 198 CIYVAIGQKASSVKNVVRALEQAGAMAYTIVVAATASESAAMQYVSAYSGCTMGEYFRDR 257
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LI+YDDL+K A AYRQ+SLLLRRPPGREAFPGDVFYLHSRLLER++++N ++E
Sbjct: 258 GQDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHSRLLERAARVNADYVEAF 317
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 318 TKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSLFNAGIRPAINAGI 377
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++K LSG IR LAQYREL +F++F+SDLD TK QL G +++ L+K
Sbjct: 378 SVSRVGGAAQTKLIKGLSGGIRTDLAQYRELAAFAQFASDLDASTKKQLDRGARVTELLK 437
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR------IINLKNNISI 579
Q + SI + L + F + +K++ FE + + + + L+ N ++
Sbjct: 438 QAQYSPLSISLMAASLFAVNKGFLDDVEVKKVLSFEAGLHAWLKDKNAALLAKLEANKAL 497
Query: 580 NK 581
+K
Sbjct: 498 DK 499
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 154/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I V TG+ + PVG +GR++N LG PID KG IN+K I
Sbjct: 76 VGAVILGEYEHISEGDTVKCTGRILEVPVGPELVGRVVNALGQPIDGKGPINAKMTDVIE 135
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GKT ++ I N ++
Sbjct: 136 KVAPGVIARQSVDQPMQTGLKSIDAMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQN 195
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ + ++++ + ++ +E + + A +G ++ E F
Sbjct: 196 MTC-IYVAIGQKASSVKNVVRALEQAGAMAYTIVVAATASESAAMQYVSAYSGCTMGEYF 254
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + +A +VS +L R P + + +L ER +
Sbjct: 255 RDRGQDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHSRLLERAARVNADYV 314
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 315 EAFTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSLFNAGIRPAIN 374
Query: 876 PLESYSKQLDPYIVGEEHYK----VANEVKFYLQKYKEL 910
S S+ + G K ++ ++ L +Y+EL
Sbjct: 375 AGISVSR-----VGGAAQTKLIKGLSGGIRTDLAQYREL 408
>gi|264676470|ref|YP_003276376.1| ATP synthase F1 subunit alpha [Comamonas testosteroni CNB-2]
gi|299531208|ref|ZP_07044619.1| F0F1 ATP synthase subunit alpha [Comamonas testosteroni S44]
gi|262206982|gb|ACY31080.1| ATP synthase F1, alpha subunit [Comamonas testosteroni CNB-2]
gi|298720791|gb|EFI61737.1| F0F1 ATP synthase subunit alpha [Comamonas testosteroni S44]
Length = 519
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/404 (57%), Positives = 303/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ +++ +G CT +I E+PVG EL+GR+VN+ G+ ID K K + +EK+
Sbjct: 78 AVILGAYEHIAEGNTVKCTGRILEVPVGPELVGRVVNALGQPIDGKGPINAKMTDVIEKV 137
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++PL TGIKSIDSM+P+G+GQRELIIGDRQTGKT +AID IINQK + VI
Sbjct: 138 APGVIARQSVDQPLQTGIKSIDSMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQGVI 197
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ NV+ L+ MDYT+VVAATA++SAA QY+S Y GCT+GEYFRD
Sbjct: 198 CIYVAIGQKASSIKNVVRSLEQAGAMDYTIVVAATASESAAMQYVSAYAGCTMGEYFRDR 257
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDL+K A AYRQ+SLLLRRPPGREAFPGDVFYLHSRLLER++++N ++E
Sbjct: 258 GEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHSRLLERAARVNADYVEAF 317
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 318 TKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSLFNAGIRPAINAGI 377
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGG+AQ K+VK LSG IR LAQYREL +F++F+SDLD T+ QL G +++ L+K
Sbjct: 378 SVSRVGGSAQTKVVKGLSGGIRTDLAQYRELAAFAQFASDLDDATRKQLDRGARVTELLK 437
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q + S + L + F I +KQ+ FE + ++ +
Sbjct: 438 QAQYSPLSTALMAASLFAVNKGFMDDIEVKQVLPFESGLHQFLK 481
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 153/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I V TG+ + PVG +GR++N LG PID KG IN+K I
Sbjct: 76 VGAVILGAYEHIAEGNTVKCTGRILEVPVGPELVGRVVNALGQPIDGKGPINAKMTDVIE 135
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TGIK ID + P +G + + G GKT ++ I N +
Sbjct: 136 KVAPGVIARQSVDQPLQTGIKSIDSMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQG 195
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ + ++++ +D ++ +E + + A G ++ E F
Sbjct: 196 VIC-IYVAIGQKASSIKNVVRSLEQAGAMDYTIVVAATASESAAMQYVSAYAGCTMGEYF 254
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + +A +VS +L R P + + +L ER +
Sbjct: 255 RDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHSRLLERAARVNADYV 314
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 315 EAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSLFNAGIRPAIN 374
Query: 876 PLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
S S+ + G KV + ++ L +Y+EL
Sbjct: 375 AGISVSR-----VGGSAQTKVVKGLSGGIRTDLAQYREL 408
>gi|254430005|ref|ZP_05043712.1| ATP synthase F1, alpha subunit [Alcanivorax sp. DG881]
gi|196196174|gb|EDX91133.1| ATP synthase F1, alpha subunit [Alcanivorax sp. DG881]
Length = 514
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 227/403 (56%), Positives = 305/403 (75%), Gaps = 2/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D L +GQK CT +I E+P G E+LGR+V++ G ID K K + VEK+
Sbjct: 74 AVVLGDYLGLAEGQKVRCTGRILEVPTGPEMLGRVVDALGNPIDGKGPIDAKQTDAVEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R VNEP+ TG KSID+M+PIG+GQRELIIGDRQ GKT +A+D IINQK+ +
Sbjct: 134 APGVIWRREVNEPVQTGYKSIDAMVPIGRGQRELIIGDRQIGKTAVAVDAIINQKDSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ + M+ T++VAA+A+D A+ Q+++P+ GCT+GEYFRD
Sbjct: 194 CVYVAIGQKQSTIANVVRKLEEHGAMENTIIVAASASDPASMQFLAPFAGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++K+N+ ++E+
Sbjct: 254 GEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKVNEDYVEQF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPA+N G+
Sbjct: 314 TNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAMNAGV 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KIVKKL G IR+ LAQYREL +F++F+SDLD T+ QL +G+ ++ LMK
Sbjct: 374 SVSRVGGAAQTKIVKKLGGGIRLALAQYRELAAFAQFASDLDDSTREQLEHGQAVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
QK + S+ E+ ++L + + +++I FE ++ Y
Sbjct: 434 QKQYSPMSVAEMGVVLYAANEGYLKGMEVEKIGSFEAALLDYM 476
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 154/342 (45%), Gaps = 25/342 (7%)
Query: 588 ENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKS 647
++ V + G+ G+ V TG+ + P G LGR+++ LG+PID KG I++K+
Sbjct: 69 QDSVGAVVLGDYLGLAEGQKVRCTGRILEVPTGPEMLGRVVDALGNPIDGKGPIDAKQTD 128
Query: 648 PIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIA 707
+ + P + N ++TG K ID + P +G + + G +GKT ++ I N
Sbjct: 129 AVEKVAPGVIWRREVNEPVQTGYKSIDAMVPIGRGQRELIIGDRQIGKTAVAVDAIINQK 188
Query: 708 IEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
C V++ +G++ + +++E ++ ++ ++P+ + G ++
Sbjct: 189 DSGIKC-VYVAIGQKQSTIANVVRKLEEHGAMENTIIVAASASDPASMQFLAPFAGCTMG 247
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 248 EYFRDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKVNE 307
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I D++ P+ + D I L + GI P
Sbjct: 308 DYVEQFTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETDLFNSGIRP 367
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
A++ S S+ + G K+ + ++ L +Y+EL
Sbjct: 368 AMNAGVSVSR-----VGGAAQTKIVKKLGGGIRLALAQYREL 404
>gi|134096552|ref|YP_001101627.1| F0F1 ATP synthase subunit beta [Herminiimonas arsenicoxydans]
gi|166201712|sp|A4GAG9.1|ATPB_HERAR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|133740455|emb|CAL63506.1| ATP synthase subunit beta (ATPase subunit beta) (ATP synthase F1
sector subunit beta) [Herminiimonas arsenicoxydans]
Length = 466
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 228/339 (67%), Positives = 279/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G ++G++R I+ +TG PI PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGIVRTIALGTSDGLRRGMIIQNTGNPITVPVGKATLGRIMDVLGNPIDECGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
++ ++ + IH P + + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 VSHERTASIHRKAPAYDELSPSQDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA H G SVF GVGER+REGNDFYHEM ++ V+D KV+++YGQMNEP
Sbjct: 160 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADAKVVDLENPENSKVAMVYGQMNEPP 219
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE FR+ GKDVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 220 GNRLRVALTGLTMAEAFRDEGKDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAE 279
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA
Sbjct: 280 EMGRLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPA 339
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP +VG++HY A V+ LQ+YKEL+D
Sbjct: 340 VDPLDSTSRQLDPLVVGQDHYDTARAVQGTLQRYKELRD 378
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 129/318 (40%), Gaps = 30/318 (9%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + ++ + AP + + L TGIK ID +
Sbjct: 76 VPVGKATLGRIMDVLGNPIDECGPVSHERTASIHRKAPAYDELSPSQDLLETGIKVIDLV 135
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K + + ++ +G++ + +++
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADA 195
Query: 311 NCMDY-------TVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAW 363
+D +V + + TG T+ E FRD G+D L D++ +
Sbjct: 196 KVVDLENPENSKVAMVYGQMNEPPGNRLRVALTGLTMAEAFRDEGKDVLFFVDNIYRFTL 255
Query: 364 AYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPII 423
A ++S LL R P + + RL ER I + G++T+ +
Sbjct: 256 AGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKTGSITSIQAV 302
Query: 424 ETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKI 478
D+T P + D + L ++ + PA++ S SR V G Y
Sbjct: 303 YVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGQDHYDT 362
Query: 479 VKKLSGDIRIMLAQYREL 496
+ + G L +Y+EL
Sbjct: 363 ARAVQG----TLQRYKEL 376
>gi|254283668|ref|ZP_04958636.1| ATP synthase F1, beta subunit [gamma proteobacterium NOR51-B]
gi|219679871|gb|EED36220.1| ATP synthase F1, beta subunit [gamma proteobacterium NOR51-B]
Length = 461
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/339 (68%), Positives = 280/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G++ GI R V +TG P+ PVG TLGRI++VLG PID +G+
Sbjct: 35 EVQQQLGDGIVRTIAMGSSEGISRGLEVENTGAPVSVPVGVETLGRIMDVLGRPIDERGD 94
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I K+++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 95 IGEKERASIHRDAPAYDELAASEELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 154
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA EH G SVF GVGER+REGNDFY+EM+ES V+D KV+++YGQMNEP
Sbjct: 155 ELINNIATEHSGLSVFAGVGERTREGNDFYYEMQESGVVDIENPSNSKVAMVYGQMNEPP 214
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 215 GNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 274
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA GIYPA
Sbjct: 275 EMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPA 334
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP ++G EHY+VA V+ LQ+YKELKD
Sbjct: 335 VDPLDSTSRQLDPLVIGNEHYEVARGVQSVLQRYKELKD 373
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 147/336 (43%), Gaps = 30/336 (8%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ +++G + T +PVG E LGRI++ G ID + K R ++ + AP +
Sbjct: 54 EGISRGLEVENTGAPVSVPVGVETLGRIMDVLGRPIDERGDIGEKERASIHRDAPAYDEL 113
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ E L TGIK ID + P KG + + G GKT ++ I N ++ + ++ +
Sbjct: 114 AASEELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIATEHSGLSVFAGV 173
Query: 294 GQKISSLINVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
G++ + +++ +D +V + + TG T+ E FRD
Sbjct: 174 GERTREGNDFYYEMQESGVVDIENPSNSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRD 233
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L+ D++ ++ A ++S LL R P V Y L E + +
Sbjct: 234 EGRDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------Q 280
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L ++ PA++ S
Sbjct: 281 ERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAVDPLDS 340
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y++ + ++ +L +Y+EL+
Sbjct: 341 TSRQLDPLVIGNEHYEVARG----VQSVLQRYKELK 372
>gi|451822773|ref|YP_007459047.1| F-type H+-transporting ATPase subunit alpha [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451775573|gb|AGF46614.1| F-type H+-transporting ATPase subunit alpha [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 513
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/415 (58%), Positives = 313/415 (75%), Gaps = 11/415 (2%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRET--VE 225
AV++ D ++++G + T +I E+PVG L GR+VN+ G ID I N ET +E
Sbjct: 73 AVILGDYTSISEGDQVKTTGRILEVPVGPSLKGRVVNALGYPIDGNGP--INNEETDVIE 130
Query: 226 KIAPGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKN 285
K+APG++DR +V++P+ TGIKSIDSM+P+G+GQRELIIGDRQTGKT++AID IINQK KN
Sbjct: 131 KVAPGVIDRYTVSQPMQTGIKSIDSMVPVGRGQRELIIGDRQTGKTSVAIDAIINQKGKN 190
Query: 286 VICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFR 345
V CIYV IGQK SS+ N + KL+ + +DYT+VV ATA+DSAA QYI+PY+GCT+GEYFR
Sbjct: 191 VTCIYVAIGQKASSVNNAVRKLQEHGALDYTIVVVATASDSAAMQYIAPYSGCTMGEYFR 250
Query: 346 DLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLE 405
D G+D LI+YDDLTK AWAYRQISLLL+RPPGREA+PGDVFYLHSRLLER++++++ ++
Sbjct: 251 DRGEDALIVYDDLTKQAWAYRQISLLLKRPPGREAYPGDVFYLHSRLLERAARVSEDYVN 310
Query: 406 K--KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINV 463
K G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN
Sbjct: 311 KFTNGAIKGRTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGVRPAINA 370
Query: 464 GLSVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLL 523
G+SVSRVGGAAQ KI+KKLSG IR LAQYREL +FS+FSSDLD T+ QL G+++ L
Sbjct: 371 GISVSRVGGAAQTKIIKKLSGGIRTDLAQYRELAAFSQFSSDLDETTRRQLERGKRVVEL 430
Query: 524 MKQKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIINLKNNIS 578
+KQ ++ S+ E I L + F + + +I FE N + F LKNN S
Sbjct: 431 LKQPQYQPLSVCEQAISLFCVNKGFLDDVDVSRIMSFE-NTFREF----LKNNFS 480
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 155/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ I V TG+ + PVG GR++N LG PID G IN+++ I
Sbjct: 71 VGAVILGDYTSISEGDQVKTTGRILEVPVGPSLKGRVVNALGYPIDGNGPINNEETDVIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P ++ + ++TGIK ID + P +G + + G GKT ++ I N ++
Sbjct: 131 KVAPGVIDRYTVSQPMQTGIKSIDSMVPVGRGQRELIIGDRQTGKTSVAIDAIINQKGKN 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ N+ +++E LD ++ ++ + + +G ++ E F
Sbjct: 191 VTC-IYVAIGQKASSVNNAVRKLQEHGALDYTIVVVATASDSAAMQYIAPYSGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 250 RDRGEDALIVYDDLTKQAWAYRQISLLLKRPPGREAYPGDVFYLHSRLLERAARVSEDYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
+ G++T++ I A D++ P+ + D I L + G+ PAI+
Sbjct: 310 NKFTNGAIKGRTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGVRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
S S+ + G K+ + ++ L +Y+EL
Sbjct: 370 AGISVSR-----VGGAAQTKIIKKLSGGIRTDLAQYREL 403
>gi|260774524|ref|ZP_05883437.1| ATP synthase beta chain [Vibrio metschnikovii CIP 69.14]
gi|260610430|gb|EEX35636.1| ATP synthase beta chain [Vibrio metschnikovii CIP 69.14]
Length = 467
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/368 (63%), Positives = 296/368 (80%), Gaps = 9/368 (2%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + ++ + +N++++ + +VQQQ+G I+R I G+++G++R V +T
Sbjct: 13 VVDVEFPQSSVPSVYDALNVQDSKERLVLEVQQQLGGGIIRCIVMGSSDGLRRGMTVENT 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
G PI PVG TLGRI+NVLGD ID +GEI +++ IH L P + Q + +LETG+K
Sbjct: 73 GGPISVPVGIKTLGRIMNVLGDAIDERGEIGAEETYSIHRLAPSYEEQSNSTELLETGVK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
VIDL+CPF KGGKIGLFGGAGVGKTVNMMELI NIA++H G SVF GVGER+REGNDFYH
Sbjct: 133 VIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNI 784
EM+E+ V++ KV+++YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLFIDNI
Sbjct: 193 EMQEAGVVNIEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNI 252
Query: 785 YRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLT 844
YR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLT
Sbjct: 253 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLT 312
Query: 845 DPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYL 904
DPSP+TTF HLD+T+VL+R IA +G+YPAIDPL+S S+QLDP +VG+EHY VA V+ L
Sbjct: 313 DPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQSTL 372
Query: 905 QKYKELKD 912
Q+YKELKD
Sbjct: 373 QRYKELKD 380
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 146/335 (43%), Gaps = 30/335 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG + LGRI+N G+ ID + + + ++ ++AP ++
Sbjct: 62 GLRRGMTVENTGGPISVPVGIKTLGRIMNVLGDAIDERGEIGAEETYSIHRLAPSYEEQS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TG+K ID + P KG + + G GKT ++ I N + + ++ +G
Sbjct: 122 NSTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
++ + ++++ ++ +V + + TG T+ E FRD
Sbjct: 182 ERTREGNDFYHEMQEAGVVNIEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDE 241
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D L+ D++ ++ A ++S LL R P V Y L E + ++
Sbjct: 242 GRDVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QE 288
Query: 408 KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSV 467
+I + G++T+ + D+T P + D + L+ N+ PAI+ S
Sbjct: 289 RITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDST 348
Query: 468 SR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y + + ++ L +Y+EL+
Sbjct: 349 SRQLDPLVVGQEHYDVARG----VQSTLQRYKELK 379
>gi|244538836|dbj|BAH82879.1| F0F1 ATP synthase subunit alpha [Candidatus Ishikawaella capsulata
Mpkobe]
Length = 513
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/404 (58%), Positives = 314/404 (77%), Gaps = 4/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ +L++G K CT +I E+PVG+ LLGR+VN+ G ID K VE I
Sbjct: 73 AVVMGSYTDLSEGMKVKCTGRILEVPVGYGLLGRVVNALGIPIDAKSAIKNDGFSPVETI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
AP ++DRESVN+P+ TG KSIDSMIPIG+GQRELIIGDRQTGKT +AIDTIINQ+ +
Sbjct: 133 APNVIDRESVNQPIHTGYKSIDSMIPIGRGQRELIIGDRQTGKTALAIDTIINQRTSGIK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK+S+++N+++KL+ Y +DYT+VV A+A+DSA+ QY++PY+GCT+GEYFR+
Sbjct: 193 CIYVAIGQKLSTVVNIVSKLEEYKALDYTIVVVASASDSASLQYLAPYSGCTMGEYFRNR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDL+K A AYRQISLLLRRPPGREAFPGDVFYLHSRLLERS+++N ++EK
Sbjct: 253 GEDALIIYDDLSKQAIAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSARVNAKYVEKF 312
Query: 407 --KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVG 464
K+ K G+LTA PIIET GDV++FIPTNVISITDGQIFL++NLFN+ RPA+N G
Sbjct: 313 TNGKVKGK-TGSLTALPIIETQAGDVSAFIPTNVISITDGQIFLESNLFNAGIRPAVNPG 371
Query: 465 LSVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLM 524
+SVSRVG AAQ I+KK+SG IR LAQYREL +FS+F+SDLD +T+ QL +G K++ L+
Sbjct: 372 ISVSRVGSAAQTNIIKKMSGGIRTTLAQYRELAAFSQFASDLDELTRKQLDHGHKVTELL 431
Query: 525 KQKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
KQK ++ S+ + I+L + + I + +I+ FE +++ YF
Sbjct: 432 KQKQYQPLSVAQQSILLFAAEYGYLTDISLTEIKNFEKSLLIYF 475
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 166/377 (44%), Gaps = 40/377 (10%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ Q E+ E++ Y +NL+ ++V + G+ + V TG+
Sbjct: 47 VMQGEMLELSTNSYAIALNLE-------------RDLVGAVVMGSYTDLSEGMKVKCTGR 93
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
+ PVG LGR++N LG PID K I + SP+ T+ P ++ N + TG K I
Sbjct: 94 ILEVPVGYGLLGRVVNALGIPIDAKSAIKNDGFSPVETIAPNVIDRESVNQPIHTGYKSI 153
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
D + P +G + + G GKT ++ I N C +++ +G++ + ++
Sbjct: 154 DSMIPIGRGQRELIIGDRQTGKTALAIDTIINQRTSGIKC-IYVAIGQKLSTVVNIVSKL 212
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTE 793
+E LD ++ ++ + + +G ++ E FRN G+D L+ D++ + +A +
Sbjct: 213 EEYKALDYTIVVVASASDSASLQYLAPYSGCTMGEYFRNRGEDALIIYDDLSKQAIAYRQ 272
Query: 794 VSAMLGRTPSAVGYQPTLAEEMGKLQERISST---------------KNGTITSVQAIYV 838
+S +L R P + + +L ER + K G++T++ I
Sbjct: 273 ISLLLRRPPGREAFPGDVFYLHSRLLERSARVNAKYVEKFTNGKVKGKTGSLTALPIIET 332
Query: 839 PADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHY---- 894
A D++ P+ + D I L + GI PA++P S S+ VG
Sbjct: 333 QAGDVSAFIPTNVISITDGQIFLESNLFNAGIRPAVNPGISVSR------VGSAAQTNII 386
Query: 895 -KVANEVKFYLQKYKEL 910
K++ ++ L +Y+EL
Sbjct: 387 KKMSGGIRTTLAQYREL 403
>gi|254876290|ref|ZP_05249000.1| F0F1 ATP synthase subunit alpha [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842311|gb|EET20725.1| F0F1 ATP synthase subunit alpha [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 513
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/396 (58%), Positives = 305/396 (77%), Gaps = 2/396 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++ +G K +CT +I E+PVG LLGR+V++ G ID + + + +EKI
Sbjct: 73 AVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGRGEIETAHSSPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++ L TGIKSIDSM+PIG+GQRELIIGDRQ GKT IAID IINQK V
Sbjct: 133 APGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAIDAIINQKGTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ N++ +L+ + M++T++VAATA+DSAA QYI+PY GC++GEYFRD
Sbjct: 193 CIYVAIGQKASSIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N+ ++E+
Sbjct: 253 GEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVERF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GD+++F+PTNVISITDGQIFL+T+LFNS RPAIN G
Sbjct: 313 TNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRPAINPGN 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQ+RELE+FS+F+SDLD T++QL G++++ L+K
Sbjct: 373 SVSRVGGAAQTKIIKKLGGGIRLALAQFRELEAFSQFASDLDEATRSQLNRGQRVTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFE 561
QK SI + + L N + + + ++ FE
Sbjct: 433 QKQFSTLSIALMALSLYAADNGYLDSLEVSEVIPFE 468
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 158/343 (46%), Gaps = 31/343 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ IK TG+ + PVG+ LGR+++ LG+PID +GEI + SPI
Sbjct: 71 VGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGRGEIETAHSSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TGIK ID + P +G + + G +GKT ++ I I
Sbjct: 131 KIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAIDAI----INQ 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ +G+++ + +++E ++ ++ ++ + + G S+
Sbjct: 187 KGTGVKCIYVAIGQKASSIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 247 EYFRDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNE 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + G+ P
Sbjct: 307 EYVERFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKELK 911
AI+P S S+ + G K+ + ++ L +++EL+
Sbjct: 367 AINPGNSVSR-----VGGAAQTKIIKKLGGGIRLALAQFRELE 404
>gi|319944940|ref|ZP_08019202.1| ATP synthase F1 sector alpha subunit [Lautropia mirabilis ATCC
51599]
gi|319741510|gb|EFV93935.1| ATP synthase F1 sector alpha subunit [Lautropia mirabilis ATCC
51599]
Length = 513
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 226/392 (57%), Positives = 308/392 (78%), Gaps = 2/392 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++++G T +I E+PVG EL+GR+VN+ G+ ID K K + +EK+
Sbjct: 73 AVILGEYESISEGDVVKTTGRILEVPVGPELIGRVVNTLGQPIDGKGPINAKETDVIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KSID+M+PIG+GQRELIIGDRQTGKT +AIDTIINQK K++I
Sbjct: 133 APGVIARQSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGKTAVAIDTIINQKGKDLI 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S++ NV+ KL+ + M+YT+VVAATA++SAA QY++PY GCT+GEYFRD
Sbjct: 193 CIYVAIGQKASTIANVVRKLEEFGAMEYTIVVAATASESAAMQYLAPYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LIIYDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER++++N+ ++E
Sbjct: 253 GQDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVENF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPA+N G+
Sbjct: 313 TKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAVNPGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ ++KKL+G RI LAQYREL +F++F+SDL+ T+ QL +G ++ LMK
Sbjct: 373 SVSRVGGAAQTGLIKKLAGGSRIALAQYRELAAFAQFASDLEESTRKQLDHGRLVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQI 557
Q + + + + L N ++ IP++++
Sbjct: 433 QAQYAPLQVWQQALTLFAADNHYYEDIPVEKV 464
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 152/335 (45%), Gaps = 17/335 (5%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I +V TG+ + PVG +GR++N LG PID KG IN+K+ I
Sbjct: 71 VGAVILGEYESISEGDVVKTTGRILEVPVGPELIGRVVNTLGQPIDGKGPINAKETDVIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GKT ++ I N +
Sbjct: 131 KVAPGVIARQSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGKTAVAIDTIINQKGKD 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ + +++E ++ ++ +E + + G ++ E F
Sbjct: 191 LIC-IYVAIGQKASTIANVVRKLEEFGAMEYTIVVAATASESAAMQYLAPYAGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A +VS +L R P Y + +L ER +
Sbjct: 250 RDRGQDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + GI PA++
Sbjct: 310 ENFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAVN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKEL 910
P S S+ G K+A + L +Y+EL
Sbjct: 370 PGISVSRVGGAAQTGLIK-KLAGGSRIALAQYREL 403
>gi|167627184|ref|YP_001677684.1| F0F1 ATP synthase subunit alpha [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189081301|sp|B0TWS5.1|ATPA_FRAP2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|167597185|gb|ABZ87183.1| H(+)-transporting two-sector ATPase [Francisella philomiragia
subsp. philomiragia ATCC 25017]
Length = 513
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/396 (58%), Positives = 305/396 (77%), Gaps = 2/396 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++ +G K +CT +I E+PVG LLGR+V++ G ID + + + +EKI
Sbjct: 73 AVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGRGEIETAHSSPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++ L TGIKSIDSM+PIG+GQRELIIGDRQ GKT IAID IINQK V
Sbjct: 133 APGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAIDAIINQKGTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ N++ +L+ + M++T++VAATA+DSAA QYI+PY GC++GEYFRD
Sbjct: 193 CIYVAIGQKASSIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N+ ++E+
Sbjct: 253 GEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVERF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GD+++F+PTNVISITDGQIFL+T+LFNS RPAIN G
Sbjct: 313 TNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRPAINPGN 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQ+RELE+FS+F+SDLD T++QL G++++ L+K
Sbjct: 373 SVSRVGGAAQTKIIKKLGGGIRLALAQFRELEAFSQFASDLDEATRSQLNRGQRVTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFE 561
QK SI + + L N + + + ++ FE
Sbjct: 433 QKQFSTLSIALMALSLYAADNGYLDSLEVSEVIPFE 468
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 158/343 (46%), Gaps = 31/343 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ IK TG+ + PVG+ LGR+++ LG+PID +GEI + SPI
Sbjct: 71 VGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGRGEIETAHSSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TGIK ID + P +G + + G +GKT ++ I I
Sbjct: 131 KIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAIDAI----INQ 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ +G+++ + +++E ++ ++ ++ + + G S+
Sbjct: 187 KGTGVKCIYVAIGQKASSIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 247 EYFRDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNE 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + G+ P
Sbjct: 307 EYVERFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKELK 911
AI+P S S+ + G K+ + ++ L +++EL+
Sbjct: 367 AINPGNSVSR-----VGGAAQTKIIKKLGGGIRLALAQFRELE 404
>gi|119503557|ref|ZP_01625640.1| Sodium-transporting two-sector ATPase [marine gamma proteobacterium
HTCC2080]
gi|119460619|gb|EAW41711.1| Sodium-transporting two-sector ATPase [marine gamma proteobacterium
HTCC2080]
Length = 514
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 225/404 (55%), Positives = 301/404 (74%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D K L +GQ C CT +I E+PVG L GR+V++ G ID + + +EKI
Sbjct: 74 AVILGDYKQLAEGQTCRCTGRILEVPVGPALQGRVVDALGNPIDGRGSIDTDETDAIEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ G+K+ID+M+PIG+GQRELIIGDRQ GKT IA+D IINQK +
Sbjct: 134 APGVIARQSVDQPVQIGLKAIDAMVPIGRGQRELIIGDRQVGKTAIAVDAIINQKGTGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV +GQK SS+ V+ KL+ + MD+T+VVAA A+D AA Q+++P+ GCT+GEY+RD
Sbjct: 194 CVYVAVGQKASSVAAVVRKLEEHGAMDHTIVVAANASDPAAMQFLAPFAGCTMGEYYRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 254 GEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA P+IET GDV++F+PTNVISITDGQIFL+ ++FN+ RPA+N G+
Sbjct: 314 TDGAVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLEADMFNAGVRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KIVKKLSG IR LAQYREL +FS+F+SDLD TK QL +GE+++ LMK
Sbjct: 374 SVSRVGGAAQSKIVKKLSGGIRTALAQYRELAAFSQFASDLDDATKAQLDHGERVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK + S+ E+ ++L +P+ +I FE ++ Y
Sbjct: 434 QKQYAPLSVAEMGVLLYAANENQLGDVPVDKIGDFETALLAYMH 477
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 168/379 (44%), Gaps = 39/379 (10%)
Query: 557 IELFEINIIKYFRIINLKNNI---SINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
I + +N ++Y +I + I ++N + +G + G+ + TG+
Sbjct: 40 IRIHGLNEVQYGEMIEFQGGIFGLALNLERDSVG-----AVILGDYKQLAEGQTCRCTGR 94
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
+ PVG GR+++ LG+PID +G I++ + I + P + + ++ G+K I
Sbjct: 95 ILEVPVGPALQGRVVDALGNPIDGRGSIDTDETDAIEKIAPGVIARQSVDQPVQIGLKAI 154
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCS---VFIGVGERSREGNDFY 730
D + P +G + + G VGKT ++ I I KG V++ VG+++
Sbjct: 155 DAMVPIGRGQRELIIGDRQVGKTAIAVDAI----INQKGTGIKCVYVAVGQKASSVAAVV 210
Query: 731 HEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLA 790
+++E +D ++ ++P+ + G ++ E +R+ G+D L+ D++ + +A
Sbjct: 211 RKLEEHGAMDHTIVVAANASDPAAMQFLAPFAGCTMGEYYRDRGEDALIIYDDLSKQAVA 270
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST---------------KNGTITSVQA 835
++S +L R P Y + +L ER + K G++T++
Sbjct: 271 YRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEKFTDGAVKGKTGSLTALPV 330
Query: 836 IYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYK 895
I A D++ P+ + D I L + G+ PA++ S S+ + G K
Sbjct: 331 IETQAGDVSAFVPTNVISITDGQIFLEADMFNAGVRPAMNAGISVSR-----VGGAAQSK 385
Query: 896 VANE----VKFYLQKYKEL 910
+ + ++ L +Y+EL
Sbjct: 386 IVKKLSGGIRTALAQYREL 404
>gi|319940677|ref|ZP_08015019.1| ATP synthase subunit beta [Sutterella wadsworthensis 3_1_45B]
gi|319805828|gb|EFW02595.1| ATP synthase subunit beta [Sutterella wadsworthensis 3_1_45B]
Length = 467
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 235/355 (66%), Positives = 290/355 (81%)
Query: 558 ELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILT 617
+++E ++K +L N +V+QQ+G+ +VRTIA G + G++R V TG+ I
Sbjct: 25 KIYEALVLKNDEADSLAENGLTFEVEQQLGDGVVRTIAMGTSEGLRRGMKVETTGREISV 84
Query: 618 PVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLC 677
PVG TLGRI++VLG PID+ G I S++ PIH + PKF + ++LETGIKVIDL+C
Sbjct: 85 PVGPKTLGRIMDVLGRPIDDCGPIGSEEIRPIHNVAPKFDELSPSVDLLETGIKVIDLIC 144
Query: 678 PFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESN 737
PF KGGK+GLFGGAGVGKTVNMMELI NIA ++ G SVF GVGER+REGNDFYHEM ES
Sbjct: 145 PFAKGGKVGLFGGAGVGKTVNMMELINNIAKQYGGYSVFAGVGERTREGNDFYHEMGESK 204
Query: 738 VLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAM 797
VLDKV++++GQMNEP GNRLRVALTGL++AE FR+ G+D+LLFIDNIYR+TLAGTEVSA+
Sbjct: 205 VLDKVAMVFGQMNEPPGNRLRVALTGLTMAEAFRDEGRDILLFIDNIYRYTLAGTEVSAL 264
Query: 798 LGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDS 857
LGR PSAVGYQPTLAEEMGKLQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+
Sbjct: 265 LGRMPSAVGYQPTLAEEMGKLQERIASTKTGSITSIQAVYVPADDLTDPSPATTFGHLDA 324
Query: 858 TIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
T+VLSR IA LGIYPA+DPL+S S+Q+DP I+G EHY VA V+ LQ+YKEL+D
Sbjct: 325 TVVLSRDIAALGIYPAVDPLDSTSRQVDPNIIGLEHYTVARRVQETLQRYKELRD 379
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 140/328 (42%), Gaps = 23/328 (7%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G K T + +PVG + LGRI++ G ID+ + + +AP +
Sbjct: 67 EGLRRGMKVETTGREISVPVGPKTLGRIMDVLGRPIDDCGPIGSEEIRPIHNVAPKFDEL 126
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ L TGIK ID + P KG + + G GKT ++ I N K ++ +
Sbjct: 127 SPSVDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQYGGYSVFAGV 186
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + +++ +D +V + + TG T+ E FRD G+D L+
Sbjct: 187 GERTREGNDFYHEMGESKVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEAFRDEGRDILL 246
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 247 FIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERIASTK 293
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 294 TGSITSIQAVYVPADDLTDPSPATTFGHLDATVVLSRDIAALGIYPAVDPLDSTSRQVDP 353
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYREL 496
+ G Y + ++ ++ L +Y+EL
Sbjct: 354 NIIGLEHYTVARR----VQETLQRYKEL 377
>gi|416233525|ref|ZP_11629354.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 12P80B1]
gi|326566564|gb|EGE16710.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 12P80B1]
Length = 473
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/370 (63%), Positives = 291/370 (78%), Gaps = 14/370 (3%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ + F +++ + +VQQQ+G+ +VRTIA G+T G+KR V ++G PI
Sbjct: 15 VEFSRGDVPQIFDALHVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLPVSNSGAPIS 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID G +N+++K IH P + Q + +LETGIKVIDLL
Sbjct: 75 VPVGQATLGRIMDVLGRPIDEAGPVNAEQKWSIHREAPSYDEQSNSTELLETGIKVIDLL 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA++H G SVF GVGER+REGNDFYHEM+E+
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYHEMQEA 194
Query: 737 NVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS-------GKDVLLFID 782
V++ KV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+D
Sbjct: 195 GVVNTEDFTQSKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDEATGKGRDVLLFVD 254
Query: 783 NIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADD 842
NIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+ST++G+ITSVQA+YVPADD
Sbjct: 255 NIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGLLQERITSTQSGSITSVQAVYVPADD 314
Query: 843 LTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKF 902
LTDPSP+TTF HLD+T+VLSR IA GIYPA+DPL+S S QLDP ++GEEHY VA V+
Sbjct: 315 LTDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDSTSHQLDPQVIGEEHYSVARGVQE 374
Query: 903 YLQKYKELKD 912
LQ+YKELKD
Sbjct: 375 VLQRYKELKD 384
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 154/360 (42%), Gaps = 39/360 (10%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + + ++ + AP ++ + E L TGIK ID +
Sbjct: 75 VPVGQATLGRIMDVLGRPIDEAGPVNAEQKWSIHREAPSYDEQSNSTELLETGIKVIDLL 134
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCIGQKI---SSLINVINKL 307
P KG + + G GKT ++ I N K+ + ++ +G++ + + + +
Sbjct: 135 CPFAKGGKVGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYHEMQEA 194
Query: 308 KYYNCMDYT----VVVAATAADSAAEQYISPYTGCTIGEYFRD-------LGQDCLIIYD 356
N D+T +V + + TG T+ EYFRD G+D L+ D
Sbjct: 195 GVVNTEDFTQSKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDEATGKGRDVLLFVD 254
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P V Y + + + L +++I + +G+
Sbjct: 255 NIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGLLQERITSTQSGS 301
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS-----RVG 471
+T+ + D+T P + D + L ++ + PA++ S S +V
Sbjct: 302 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDSTSHQLDPQVI 361
Query: 472 GAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
G Y + + ++ +L +Y+EL+ +L K +Y KI + Q H
Sbjct: 362 GEEHYSVARG----VQEVLQRYKELKDIIAILGMDELSEEDKLVVYRARKIQRFLSQPFH 417
>gi|422348901|ref|ZP_16429793.1| ATP synthase subunit beta [Sutterella wadsworthensis 2_1_59BFAA]
gi|404658953|gb|EKB31815.1| ATP synthase subunit beta [Sutterella wadsworthensis 2_1_59BFAA]
Length = 467
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/332 (69%), Positives = 281/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G++ G++R V TG I PVG TLGRI++VLG PID+ G+
Sbjct: 48 EVQQQLGDGVVRTIAMGSSEGLQRGMKVKSTGHEISVPVGPKTLGRIMDVLGRPIDDCGD 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ PIH PKF + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 108 IGAEEVRPIHRPAPKFDELSPSVELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA ++ G SVF GVGER+REGNDFYHEM+ES+VLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKQYGGYSVFAGVGERTREGNDFYHEMEESHVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+D+LLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 228 LTGLTMAEAFRDEGRDILLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RIASTKTGSITSIQAVYVPADDLTDPSPATTFGHLDATVVLSRDIAALGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP I+GEEHY + V+ LQ+YKEL+D
Sbjct: 348 SRQVDPNIIGEEHYSICRRVQETLQRYKELRD 379
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 157/364 (43%), Gaps = 30/364 (8%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G K T +PVG + LGRI++ G ID+ + + + AP +
Sbjct: 67 EGLQRGMKVKSTGHEISVPVGPKTLGRIMDVLGRPIDDCGDIGAEEVRPIHRPAPKFDEL 126
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
E L TGIK ID + P KG + + G GKT ++ I N K ++ +
Sbjct: 127 SPSVELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQYGGYSVFAGV 186
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLI 353
G++ + ++++ + +D +V + + TG T+ E FRD G+D L+
Sbjct: 187 GERTREGNDFYHEMEESHVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEAFRDEGRDILL 246
Query: 354 IYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKN 413
D++ ++ A ++S LL R P V Y L E K+ +++I +
Sbjct: 247 FIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERIASTK 293
Query: 414 NGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR---- 469
G++T+ + D+T P D + L ++ PA++ S SR
Sbjct: 294 TGSITSIQAVYVPADDLTDPSPATTFGHLDATVVLSRDIAALGIYPAVDPLDSTSRQVDP 353
Query: 470 -VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMKQKP 528
+ G Y I ++ ++ L +Y+EL + I+ +L +K++ +M+ +
Sbjct: 354 NIIGEEHYSICRR----VQETLQRYKELRDI------IAILGMDELAPEDKLT-VMRARK 402
Query: 529 HENY 532
+NY
Sbjct: 403 IQNY 406
>gi|56707241|ref|YP_169137.1| ATP synthase F0F1 subunit alpha [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110669711|ref|YP_666268.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
tularensis FSC198]
gi|254369926|ref|ZP_04985934.1| hypothetical protein FTBG_01518 [Francisella tularensis subsp.
tularensis FSC033]
gi|254874079|ref|ZP_05246789.1| ATP synthase alpha subunit [Francisella tularensis subsp.
tularensis MA00-2987]
gi|379716442|ref|YP_005304778.1| ATP synthase subunit alpha [Francisella tularensis subsp.
tularensis TIGB03]
gi|379725125|ref|YP_005317311.1| ATP synthase subunit alpha [Francisella tularensis subsp.
tularensis TI0902]
gi|385793815|ref|YP_005830221.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
tularensis NE061598]
gi|421754667|ref|ZP_16191634.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
tularensis 80700075]
gi|81677143|sp|Q5NIK5.1|ATPA_FRATT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|122971110|sp|Q14K08.1|ATPA_FRAT1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|56603733|emb|CAG44695.1| ATP synthase alpha chain [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110320044|emb|CAL08078.1| ATP synthase alpha chain [Francisella tularensis subsp. tularensis
FSC198]
gi|151568172|gb|EDN33826.1| hypothetical protein FTBG_01518 [Francisella tularensis subsp.
tularensis FSC033]
gi|254840078|gb|EET18514.1| ATP synthase alpha subunit [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282158350|gb|ADA77741.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
tularensis NE061598]
gi|377826574|gb|AFB79822.1| ATP synthase alpha chain [Francisella tularensis subsp. tularensis
TI0902]
gi|377828119|gb|AFB78198.1| ATP synthase alpha chain [Francisella tularensis subsp. tularensis
TIGB03]
gi|409090709|gb|EKM90721.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
tularensis 80700075]
Length = 513
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/396 (58%), Positives = 303/396 (76%), Gaps = 2/396 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++ +G K +CT +I E+PVG LLGR+V++ G ID K + +EKI
Sbjct: 73 AVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEVATDLTSPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++ L TGIKSIDSM+PIG+GQRELIIGDRQ GKT IA+DTIINQK V
Sbjct: 133 APGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTIINQKGTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S++ N++ +L+ + M++ ++VAATA+DSAA QYI+PY GC++GEYFRD
Sbjct: 193 CIYVAIGQKASTIANIVRQLEEHGAMEHAIIVAATASDSAALQYIAPYAGCSMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N+ ++EK
Sbjct: 253 GQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GD+++F+PTNVISITDGQIFL+T+LFNS RPAIN G
Sbjct: 313 TNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRPAINPGN 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQYRELE+FS+F+SDLD T+ QL G++++ L+K
Sbjct: 373 SVSRVGGAAQTKIIKKLGGGIRLALAQYRELEAFSQFASDLDEATRAQLNRGQRVTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFE 561
QK S+ + + L N + + + ++ FE
Sbjct: 433 QKQFSTLSVALMALSLYAADNGYLDNLEVSEVIPFE 468
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 158/343 (46%), Gaps = 31/343 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ IK TG+ + PVG+ LGR+++ LG+PID KGE+ + SPI
Sbjct: 71 VGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEVATDLTSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TGIK ID + P +G + + G +GKT ++ I I
Sbjct: 131 KIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTI----INQ 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ +G+++ + +++E ++ ++ ++ + + G S+
Sbjct: 187 KGTGVKCIYVAIGQKASTIANIVRQLEEHGAMEHAIIVAATASDSAALQYIAPYAGCSMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 247 EYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNE 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + G+ P
Sbjct: 307 EYVEKFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKELK 911
AI+P S S+ + G K+ + ++ L +Y+EL+
Sbjct: 367 AINPGNSVSR-----VGGAAQTKIIKKLGGGIRLALAQYRELE 404
>gi|418532990|ref|ZP_13098879.1| F0F1 ATP synthase subunit alpha [Comamonas testosteroni ATCC 11996]
gi|371449853|gb|EHN62916.1| F0F1 ATP synthase subunit alpha [Comamonas testosteroni ATCC 11996]
Length = 519
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/404 (57%), Positives = 304/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ +++ +G CT +I E+PVG EL+GR+VN+ G+ ID K K + +EK+
Sbjct: 78 AVILGAYEHIAEGNTVKCTGRILEVPVGPELVGRVVNALGQPIDGKGPINAKMTDVIEKV 137
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++PL TGIKSIDSM+P+G+GQRELIIGDRQTGKT +AID IINQK + VI
Sbjct: 138 APGVIARQSVDQPLQTGIKSIDSMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQGVI 197
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK SS+ NV+ L+ M+YT+VVAATA++SAA QY+S Y+GCT+GEYFRD
Sbjct: 198 CVYVAIGQKASSIKNVVRALEQAGAMEYTIVVAATASESAAMQYVSAYSGCTMGEYFRDR 257
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDL+K A AYRQ+SLLLRRPPGREAFPGDVFYLHSRLLER++++N ++E
Sbjct: 258 GEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHSRLLERAARVNADYVEAF 317
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 318 TKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSLFNAGVRPAINAGI 377
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K+VK LSG IR LAQYREL +F++F+SDLD T+ QL G +++ L+K
Sbjct: 378 SVSRVGGAAQTKVVKGLSGGIRTDLAQYRELAAFAQFASDLDDATRKQLDRGARVTELLK 437
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q + S + L + F I +KQ+ FE + ++ +
Sbjct: 438 QAQYSPLSTALMASSLFAVNKGFMDDIEVKQVLPFESGLHQFLK 481
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 154/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I V TG+ + PVG +GR++N LG PID KG IN+K I
Sbjct: 76 VGAVILGAYEHIAEGNTVKCTGRILEVPVGPELVGRVVNALGQPIDGKGPINAKMTDVIE 135
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TGIK ID + P +G + + G GKT ++ I N +
Sbjct: 136 KVAPGVIARQSVDQPLQTGIKSIDSMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQG 195
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C V++ +G+++ + ++++ ++ ++ +E + + A +G ++ E F
Sbjct: 196 VIC-VYVAIGQKASSIKNVVRALEQAGAMEYTIVVAATASESAAMQYVSAYSGCTMGEYF 254
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + +A +VS +L R P + + +L ER +
Sbjct: 255 RDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHSRLLERAARVNADYV 314
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + G+ PAI+
Sbjct: 315 EAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSLFNAGVRPAIN 374
Query: 876 PLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
S S+ + G KV + ++ L +Y+EL
Sbjct: 375 AGISVSR-----VGGAAQTKVVKGLSGGIRTDLAQYREL 408
>gi|330447292|ref|ZP_08310942.1| ATP synthase F1, beta subunit [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491483|dbj|GAA05439.1| ATP synthase F1, beta subunit [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 468
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/346 (67%), Positives = 283/346 (81%), Gaps = 7/346 (2%)
Query: 574 KNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGD 633
+N + +VQQQ+G +VR IA G ++G++R V +TG+PI PVG+ TLGRI+NVLG
Sbjct: 36 ENGTLVLEVQQQLGGGVVRGIAMGTSDGLRRGLSVENTGRPIEVPVGNATLGRIMNVLGQ 95
Query: 634 PIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGV 693
PID GEI +++ IH P + Q +LETG+KVIDL+CPF KGGKIGLFGGAGV
Sbjct: 96 PIDECGEIGEQERYAIHRAAPSYEEQSNVTELLETGVKVIDLICPFAKGGKIGLFGGAGV 155
Query: 694 GKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIY 746
GKTVNMMELI NIA++H G SVF GVGER+REGNDFY+EM+E+ V++ KV+++Y
Sbjct: 156 GKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYYEMQEAGVVNIENPEESKVAMVY 215
Query: 747 GQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVG 806
GQMNEP GNRLRVALTGL++AE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVG
Sbjct: 216 GQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVG 275
Query: 807 YQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIA 866
YQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA
Sbjct: 276 YQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIA 335
Query: 867 ELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LG+YPAIDPL+S S+ LDP +VG+EHY +A V+ LQ+YKELKD
Sbjct: 336 SLGLYPAIDPLDSTSRMLDPLVVGQEHYDIARGVQSLLQRYKELKD 381
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 156/374 (41%), Gaps = 42/374 (11%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T + E+PVG LGRI+N G+ ID + + R + + AP ++
Sbjct: 63 GLRRGLSVENTGRPIEVPVGNATLGRIMNVLGQPIDECGEIGEQERYAIHRAAPSYEEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCIG 294
+V E L TG+K ID + P KG + + G GKT ++ I N K+ + ++ +G
Sbjct: 123 NVTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVG 182
Query: 295 QKI------------SSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGE 342
++ + ++N+ N + M Y + + TG T+ E
Sbjct: 183 ERTREGNDFYYEMQEAGVVNIENPEESKVAMVY-----GQMNEPPGNRLRVALTGLTMAE 237
Query: 343 YFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKY 402
FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 238 RFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL--- 287
Query: 403 FLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAIN 462
+++I + G++T+ + D+T P + D + L + + PAI+
Sbjct: 288 ---QERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPAID 344
Query: 463 VGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLY 515
S SR V G Y I + ++ +L +Y+EL+ +L K +
Sbjct: 345 PLDSTSRMLDPLVVGQEHYDIARG----VQSLLQRYKELKDIIAILGMDELSEEDKQAVS 400
Query: 516 NGEKISLLMKQKPH 529
KI + Q H
Sbjct: 401 RARKIERFLTQPYH 414
>gi|88705417|ref|ZP_01103128.1| ATP synthase beta chain [Congregibacter litoralis KT71]
gi|88700507|gb|EAQ97615.1| ATP synthase beta chain [Congregibacter litoralis KT71]
Length = 465
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 229/339 (67%), Positives = 282/339 (83%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G++ G+ R V +TG PI PVG TLGRI++VLG+PID +G
Sbjct: 40 EVQQQLGDGVVRTIAMGSSEGLSRGLGVDNTGAPIAVPVGGETLGRIMDVLGNPIDERGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I K+++ IH P + ++++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEKERASIHRAAPTYEELSASDDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA++H G SVF GVGER+REGNDFY+EM+ES V+D KV+++YGQMNEP
Sbjct: 160 ELINNIALQHSGLSVFAGVGERTREGNDFYYEMQESKVVDIENPSNSKVAMVYGQMNEPP 219
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 220 GNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 279
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA GIYPA
Sbjct: 280 EMGALQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPA 339
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP ++G EHY+ A V+ LQ+YKELKD
Sbjct: 340 VDPLDSTSRQLDPLLIGNEHYEAARGVQNVLQRYKELKD 378
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 145/336 (43%), Gaps = 30/336 (8%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L++G T +PVG E LGRI++ G ID + K R ++ + AP +
Sbjct: 59 EGLSRGLGVDNTGAPIAVPVGGETLGRIMDVLGNPIDERGPIGEKERASIHRAAPTYEEL 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ ++ L TGIK ID + P KG + + G GKT ++ I N + + ++ +
Sbjct: 119 SASDDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
G++ + +++ +D +V + + TG T+ E FRD
Sbjct: 179 GERTREGNDFYYEMQESKVVDIENPSNSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRD 238
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L+ D++ ++ A ++S LL R P V Y L E + +
Sbjct: 239 EGRDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGAL------Q 285
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L ++ PA++ S
Sbjct: 286 ERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAVDPLDS 345
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR + G Y+ + ++ +L +Y+EL+
Sbjct: 346 TSRQLDPLLIGNEHYEAARG----VQNVLQRYKELK 377
>gi|427399906|ref|ZP_18891144.1| ATP synthase subunit beta [Massilia timonae CCUG 45783]
gi|425721183|gb|EKU84097.1| ATP synthase subunit beta [Massilia timonae CCUG 45783]
Length = 467
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 228/354 (64%), Positives = 286/354 (80%), Gaps = 7/354 (1%)
Query: 566 KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLG 625
K + + ++ + +VQQQ+G+ +VRTIA G++ G++R ++ +TG PI+ PVG TLG
Sbjct: 25 KVYDALKMEGSELTLEVQQQLGDGVVRTIALGSSEGLRRGMMIQNTGNPIMVPVGVPTLG 84
Query: 626 RILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKI 685
RI++VLG+PID G ++ ++ + IH P + + ++LETGIKVIDL+CPF KGGK+
Sbjct: 85 RIMDVLGNPIDECGPVSHERMASIHRDAPAYDELSPSTDLLETGIKVIDLVCPFAKGGKV 144
Query: 686 GLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD----- 740
GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM ++ V+D
Sbjct: 145 GLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADAKVVDLENPA 204
Query: 741 --KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAML 798
KV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVL F+DNIYR+TLAGTEVSA+L
Sbjct: 205 NSKVAMVYGQMNEPPGNRLRVALTGLTMAEAFRDEGKDVLFFVDNIYRYTLAGTEVSALL 264
Query: 799 GRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDST 858
GR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST
Sbjct: 265 GRMPSAVGYQPTLAEEMGRLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDST 324
Query: 859 IVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+VLSR IA LGIYPA+DPL+S S+QLDP +VGEEHY A V+ LQ+YKEL+D
Sbjct: 325 VVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGEEHYSTARAVQGTLQRYKELRD 378
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 157/391 (40%), Gaps = 48/391 (12%)
Query: 132 RCLNQTLNIKFANNTVL----SGQING---TTGYEEAAAQGFV-AVLIDDLKNLTQGQKC 183
+C+ ++++F N + + ++ G T ++ G V + + + L +G
Sbjct: 8 QCIGAVVDVEFPRNAMPKVYDALKMEGSELTLEVQQQLGDGVVRTIALGSSEGLRRGMMI 67
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T +PVG LGRI++ G ID + ++ + AP + + L T
Sbjct: 68 QNTGNPIMVPVGVPTLGRIMDVLGNPIDECGPVSHERMASIHRDAPAYDELSPSTDLLET 127
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 128 GIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 187
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGEYFRDLGQD 350
Y+ D VV A+S Q P TG T+ E FRD G+D
Sbjct: 188 F-----YHEMADAKVVDLENPANSKVAMVYGQMNEPPGNRLRVALTGLTMAEAFRDEGKD 242
Query: 351 CLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIF 410
L D++ ++ A ++S LL R P + + RL ER I
Sbjct: 243 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------IT 289
Query: 411 NKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR- 469
+ G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 290 STKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQ 349
Query: 470 ----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + + G L +Y+EL
Sbjct: 350 LDPLVVGEEHYSTARAVQG----TLQRYKEL 376
>gi|415903479|ref|ZP_11552232.1| F0F1-type ATP synthase, beta subunit protein [Herbaspirillum
frisingense GSF30]
gi|407763690|gb|EKF72314.1| F0F1-type ATP synthase, beta subunit protein [Herbaspirillum
frisingense GSF30]
Length = 466
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/354 (64%), Positives = 285/354 (80%), Gaps = 7/354 (1%)
Query: 566 KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLG 625
K + + L+ + +VQQQ+G+ +VRTIA G+++G++R + +TGK I PVG TLG
Sbjct: 25 KVYDALKLEGSDLTLEVQQQLGDGVVRTIALGSSDGLRRGLTISNTGKAITVPVGTATLG 84
Query: 626 RILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKI 685
RI++VLG+PID G ++ ++ + IH P + + +LETGIKVIDL+CPF KGGK+
Sbjct: 85 RIMDVLGNPIDECGPVSHEQTASIHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKV 144
Query: 686 GLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD----- 740
GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM E+ V+D
Sbjct: 145 GLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMAEAKVVDLENPA 204
Query: 741 --KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAML 798
KV+++YGQMNEP GNRLRVALTGL+IAE FR+ GKDVL F+DNIYR+TLAGTEVSA+L
Sbjct: 205 NSKVAMVYGQMNEPPGNRLRVALTGLTIAEGFRDEGKDVLFFVDNIYRYTLAGTEVSALL 264
Query: 799 GRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDST 858
GR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST
Sbjct: 265 GRMPSAVGYQPTLAEEMGRLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDST 324
Query: 859 IVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY+ A V+ LQ+YKEL+D
Sbjct: 325 VVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGQEHYETARAVQGTLQRYKELRD 378
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 136/334 (40%), Gaps = 30/334 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID + ++ + AP +
Sbjct: 60 GLRRGLTISNTGKAITVPVGTATLGRIMDVLGNPIDECGPVSHEQTASIHRKAPAYDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 PSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
++ + +++ +D +V + + TG TI E FRD
Sbjct: 180 ERTREGNDFYHEMAEAKVVDLENPANSKVAMVYGQMNEPPGNRLRVALTGLTIAEGFRDE 239
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 GKDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------ 287
Query: 408 KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSV 467
I + G++T+ + D+T P + D + L ++ + PA++ S
Sbjct: 288 -ITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDST 346
Query: 468 SR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
SR V G Y+ + + G L +Y+EL
Sbjct: 347 SRQLDPQVVGQEHYETARAVQG----TLQRYKEL 376
>gi|89092249|ref|ZP_01165203.1| ATP synthase alpha chain [Neptuniibacter caesariensis]
gi|89083337|gb|EAR62555.1| ATP synthase alpha chain [Oceanospirillum sp. MED92]
Length = 514
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/415 (55%), Positives = 312/415 (75%), Gaps = 4/415 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D ++L +G CT +I E+P+G EL GR+V++ G ID K K + VEK+
Sbjct: 74 AVVLGDYQDLVEGATARCTGRILEVPIGPELQGRVVDALGNPIDGKGPVETKLTDAVEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG+++R+ V++P+ TG+K+IDSM+PIG+GQRELIIGDRQ GK+ IAID IINQK+ V
Sbjct: 134 APGVIERQGVDQPVQTGLKAIDSMVPIGRGQRELIIGDRQIGKSAIAIDAIINQKDTGVK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK S++ NV+ KL+ + MD+T+VVAA A+D AA Q+++PY GCT+GEY+RD
Sbjct: 194 CIYVAVGQKQSTIANVVRKLEEHGAMDHTIVVAAGASDPAAMQFLAPYAGCTMGEYYRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 254 GEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LT+ P+IET GDV++F+PTNVISITDGQIFL+T+LFNS RPAIN GL
Sbjct: 314 TDGEVKGQTGSLTSLPVIETQGGDVSAFVPTNVISITDGQIFLETDLFNSGVRPAINAGL 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G +R+ LAQYREL +F++F+SDLD T+ QL +G+ ++ LMK
Sbjct: 374 SVSRVGGAAQTKIIKKLGGGVRLALAQYRELAAFAQFASDLDDATRDQLEHGQSVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF--RIINLKNNIS 578
QK + SI ++ + L + + + ++ FE +I +F +L N+I+
Sbjct: 434 QKQYSPMSIADMGLSLYAANEGYLKGVDLNKVLDFEAALIAFFNSEYADLMNDIN 488
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 149/339 (43%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ + TG+ + P+G GR+++ LG+PID KG + +K +
Sbjct: 72 VGAVVLGDYQDLVEGATARCTGRILEVPIGPELQGRVVDALGNPIDGKGPVETKLTDAVE 131
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G +GK+ ++ I N
Sbjct: 132 KVAPGVIERQGVDQPVQTGLKAIDSMVPIGRGQRELIIGDRQIGKSAIAIDAIINQKDTG 191
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ VG++ + +++E +D ++ ++P+ + G ++ E +
Sbjct: 192 VKC-IYVAVGQKQSTIANVVRKLEEHGAMDHTIVVAAGASDPAAMQFLAPYAGCTMGEYY 250
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 251 RDRGEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYV 310
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
+ G++TS+ I D++ P+ + D I L + G+ PAI+
Sbjct: 311 EKFTDGEVKGQTGSLTSLPVIETQGGDVSAFVPTNVISITDGQIFLETDLFNSGVRPAIN 370
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G K+ + V+ L +Y+EL
Sbjct: 371 AGLSVSR-----VGGAAQTKIIKKLGGGVRLALAQYREL 404
>gi|89074728|ref|ZP_01161186.1| ATP synthase subunit B [Photobacterium sp. SKA34]
gi|89049492|gb|EAR55053.1| ATP synthase subunit B [Photobacterium sp. SKA34]
Length = 468
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/346 (67%), Positives = 284/346 (82%), Gaps = 7/346 (2%)
Query: 574 KNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGD 633
+N + +VQQQ+G +VR IA G ++G++R V +TG+PI PVG TLGRI+NVLG
Sbjct: 36 ENGTLVLEVQQQLGGGVVRGIAMGTSDGLRRGLSVENTGRPIEVPVGTATLGRIMNVLGQ 95
Query: 634 PIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGV 693
PID GEI +++ IH P + +Q +LETG+KVIDL+CPF KGGKIGLFGGAGV
Sbjct: 96 PIDECGEIGEQERYAIHREAPSYEDQSNVTELLETGVKVIDLICPFAKGGKIGLFGGAGV 155
Query: 694 GKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIY 746
GKTVNMMELI NIA++H G SVF GVGER+REGNDFY+EM+E+ V++ KV+++Y
Sbjct: 156 GKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYYEMQEAGVVNIENPEESKVAMVY 215
Query: 747 GQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVG 806
GQMNEP GNRLRVALTGL++AE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVG
Sbjct: 216 GQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVG 275
Query: 807 YQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIA 866
YQPTLAEEMG LQERI+STK+G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA
Sbjct: 276 YQPTLAEEMGVLQERITSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIA 335
Query: 867 ELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LG+YPAIDPL+S S+ LDP +VG+EHY +A V+ LQ+YKELKD
Sbjct: 336 SLGLYPAIDPLDSTSRMLDPLVVGQEHYDIARGVQSLLQRYKELKD 381
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 157/374 (41%), Gaps = 42/374 (11%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T + E+PVG LGRI+N G+ ID + + R + + AP D+
Sbjct: 63 GLRRGLSVENTGRPIEVPVGTATLGRIMNVLGQPIDECGEIGEQERYAIHREAPSYEDQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCIG 294
+V E L TG+K ID + P KG + + G GKT ++ I N K+ + ++ +G
Sbjct: 123 NVTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVG 182
Query: 295 QKI------------SSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGE 342
++ + ++N+ N + M Y + + TG T+ E
Sbjct: 183 ERTREGNDFYYEMQEAGVVNIENPEESKVAMVY-----GQMNEPPGNRLRVALTGLTMAE 237
Query: 343 YFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKY 402
FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 238 RFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL--- 287
Query: 403 FLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAIN 462
+++I + +G++T+ + D+T P + D + L + + PAI+
Sbjct: 288 ---QERITSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPAID 344
Query: 463 VGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLY 515
S SR V G Y I + ++ +L +Y+EL+ +L K +
Sbjct: 345 PLDSTSRMLDPLVVGQEHYDIARG----VQSLLQRYKELKDIIAILGMDELSEEDKQAVS 400
Query: 516 NGEKISLLMKQKPH 529
KI + Q H
Sbjct: 401 RARKIERFLTQPYH 414
>gi|88705415|ref|ZP_01103126.1| ATP synthase alpha chain [Congregibacter litoralis KT71]
gi|88700505|gb|EAQ97613.1| ATP synthase alpha chain [Congregibacter litoralis KT71]
Length = 514
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 227/402 (56%), Positives = 303/402 (75%), Gaps = 2/402 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D K L +GQ C CT +I E+PVG EL GR+V++ G ID K + +EK+
Sbjct: 74 AVVLGDYKGLAEGQSCRCTGRILEVPVGPELQGRVVDALGSPIDGKGPVNAAMTDALEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ G+K+ID+M+PIG+GQRELIIGDRQ GKT IA+D IINQK +
Sbjct: 134 APGVIARQSVDQPVQIGLKAIDAMVPIGRGQRELIIGDRQIGKTAIAVDAIINQKGTGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV +GQK SS+ V+ KL+ + MD+T+VVAA A+D AA QY++P+ GCT+GEY+RD
Sbjct: 194 CVYVAVGQKTSSVAAVVRKLEEHGAMDHTIVVAANASDPAAMQYLAPFAGCTMGEYYRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 254 GEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA P+IET GDV++F+PTNVISITDGQIFL+T++FNS RPA+N G+
Sbjct: 314 TDGAVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLETDMFNSGIRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKLSG IR LAQYREL +FS+F+SDLD TK QL +GE+++ LMK
Sbjct: 374 SVSRVGGAAQTKVIKKLSGGIRTALAQYRELAAFSQFASDLDEATKAQLDHGERVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKY 567
QK + SI E+ ++L + +++I FE ++ Y
Sbjct: 434 QKQYSPQSIAEMGLMLYAANEGHLKDVEVEKIGDFESALLSY 475
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 151/342 (44%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ G+ TG+ + PVG GR+++ LG PID KG +N+ +
Sbjct: 72 VGAVVLGDYKGLAEGQSCRCTGRILEVPVGPELQGRVVDALGSPIDGKGPVNAAMTDALE 131
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++ G+K ID + P +G + + G +GKT ++ I I
Sbjct: 132 KVAPGVIARQSVDQPVQIGLKAIDAMVPIGRGQRELIIGDRQIGKTAIAVDAI----INQ 187
Query: 711 KGCS---VFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V++ VG+++ +++E +D ++ ++P+ + G ++
Sbjct: 188 KGTGIKCVYVAVGQKTSSVAAVVRKLEEHGAMDHTIVVAANASDPAAMQYLAPFAGCTMG 247
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E +R+ G+D L+ D++ + +A ++S +L R P Y + +L ER +
Sbjct: 248 EYYRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNA 307
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + GI P
Sbjct: 308 DYVEKFTDGAVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLETDMFNSGIRP 367
Query: 873 AIDPLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
A++ S S+ + G KV + ++ L +Y+EL
Sbjct: 368 AMNAGISVSR-----VGGAAQTKVIKKLSGGIRTALAQYREL 404
>gi|119503555|ref|ZP_01625638.1| F0F1 ATP synthase subunit beta [marine gamma proteobacterium
HTCC2080]
gi|119460617|gb|EAW41709.1| F0F1 ATP synthase subunit beta [marine gamma proteobacterium
HTCC2080]
Length = 465
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/363 (64%), Positives = 287/363 (79%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E N+ + + +++ +VQQQ+G+ +VR IA G++ GI R V +TG PI
Sbjct: 16 VEFPRDNVPQVYDALSVSEKGLTLEVQQQLGDGVVRAIAMGSSEGISRGLSVENTGAPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG+PID KG I +++S IH P + + +LETGIKVIDL+
Sbjct: 76 VPVGIETLGRIMDVLGNPIDEKGPIGEQQRSAIHRAAPAYDELAASEEVLETGIKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFY+EM+ES
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIATEHSGLSVFAGVGERTREGNDFYYEMQES 195
Query: 737 NVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
V++ KV+++YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TL
Sbjct: 196 GVVNIENMDQSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTL 255
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+
Sbjct: 256 AGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPA 315
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLDST+VLSR IA GIYPA+DPL+S S+QLDP ++G EHY VA V+ LQ+YKE
Sbjct: 316 TTFAHLDSTVVLSRDIAAKGIYPAVDPLDSTSRQLDPLVIGTEHYDVARGVQSVLQRYKE 375
Query: 910 LKD 912
LKD
Sbjct: 376 LKD 378
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 148/348 (42%), Gaps = 40/348 (11%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + + +++G T +PVG E LGRI++ G ID K + R + +
Sbjct: 52 AIAMGSSEGISRGLSVENTGAPISVPVGIETLGRIMDVLGNPIDEKGPIGEQQRSAIHRA 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV- 286
AP + + E L TGIK ID + P KG + + G GKT ++ I N ++
Sbjct: 112 APAYDELAASEEVLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIATEHSG 171
Query: 287 ICIYVCIGQKI------------SSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISP 334
+ ++ +G++ S ++N+ N + M Y + +
Sbjct: 172 LSVFAGVGERTREGNDFYYEMQESGVVNIENMDQSKVAMVY-----GQMNEPPGNRLRVA 226
Query: 335 YTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLE 394
TG T+ E FRD G+D L+ D++ ++ A ++S LL R P V Y L E
Sbjct: 227 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAE 279
Query: 395 RSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFN 454
+ +++I + G++T+ + D+T P + D + L ++
Sbjct: 280 EMGVL------QERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAA 333
Query: 455 SNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
PA++ S SR V G Y + + ++ +L +Y+EL+
Sbjct: 334 KGIYPAVDPLDSTSRQLDPLVIGTEHYDVARG----VQSVLQRYKELK 377
>gi|254515887|ref|ZP_05127947.1| ATP synthase F1, beta subunit [gamma proteobacterium NOR5-3]
gi|219675609|gb|EED31975.1| ATP synthase F1, beta subunit [gamma proteobacterium NOR5-3]
Length = 465
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 229/339 (67%), Positives = 282/339 (83%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G++ G+ R V +TG PI PVG+ TLGRI++VLG+PID +G
Sbjct: 40 EVQQQLGDGVVRTIAMGSSEGLSRGLSVDNTGAPIAVPVGNETLGRIMDVLGNPIDERGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++++ IH P + ++++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEQERASIHRAAPTYEELSASDDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA++H G SVF GVGER+REGNDFY+EM+ES V+D KV+++YGQMNEP
Sbjct: 160 ELINNIALQHSGLSVFAGVGERTREGNDFYYEMQESKVVDLENPANSKVAMVYGQMNEPP 219
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 220 GNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 279
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA GIYPA
Sbjct: 280 EMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPA 339
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP ++G EHY A V+ LQ+YKELKD
Sbjct: 340 VDPLDSTSRQLDPLLIGNEHYDTARGVQNVLQRYKELKD 378
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 131/308 (42%), Gaps = 31/308 (10%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L++G T +PVG E LGRI++ G ID + + R ++ + AP +
Sbjct: 59 EGLSRGLSVDNTGAPIAVPVGNETLGRIMDVLGNPIDERGPIGEQERASIHRAAPTYEEL 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCI 293
+ ++ L TGIK ID + P KG + + G GKT ++ I N + + ++ +
Sbjct: 119 SASDDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCMDYTVVVAATAADSAAE----QYISP--------YTGCTIG 341
G++ + YY + VV A+S Q P TG T+
Sbjct: 179 GERTREGNDF-----YYEMQESKVVDLENPANSKVAMVYGQMNEPPGNRLRVALTGLTMA 233
Query: 342 EYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINK 401
E FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 234 EKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL-- 284
Query: 402 YFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAI 461
+++I + G++T+ + D+T P + D + L ++ PA+
Sbjct: 285 ----QERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAV 340
Query: 462 NVGLSVSR 469
+ S SR
Sbjct: 341 DPLDSTSR 348
>gi|400287356|ref|ZP_10789388.1| F0F1 ATP synthase subunit beta [Psychrobacter sp. PAMC 21119]
Length = 477
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/346 (67%), Positives = 286/346 (82%), Gaps = 14/346 (4%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G+T G+KRN V +TG PI PVG TLGRI++VLG PID +G
Sbjct: 40 EVQQQLGDGIVRTIAMGSTEGLKRNLPVTNTGAPISVPVGIGTLGRIMDVLGRPIDEEGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ + +K IH P +++Q + +LETGIKVIDLLCPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 VEADEKWSIHREAPSYADQSNSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA++H+G SVF GVGER+REGNDFYHEM+E+ V++ KV+++YGQMNEP
Sbjct: 160 ELINNIALKHEGLSVFAGVGERTREGNDFYHEMQEAGVVNTEDFSKSKVAMVYGQMNEPP 219
Query: 754 GNRLRVALTGLSIAEEFRNS-------GKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVG 806
GNRLRVAL+GL++AE FR++ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVG
Sbjct: 220 GNRLRVALSGLTMAEYFRDTKDPATGKGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVG 279
Query: 807 YQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIA 866
YQPTLAEEMG LQERI+ST++G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA
Sbjct: 280 YQPTLAEEMGMLQERITSTQSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIA 339
Query: 867 ELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
GIYPA+DPL+S S+QLDP ++GEEHY VA V+ LQ+YKELKD
Sbjct: 340 SQGIYPAVDPLDSTSRQLDPQVIGEEHYNVARGVQEILQRYKELKD 385
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 154/360 (42%), Gaps = 39/360 (10%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + + ++ + AP D+ + E L TGIK ID +
Sbjct: 76 VPVGIGTLGRIMDVLGRPIDEEGPVEADEKWSIHREAPSYADQSNSTELLETGIKVIDLL 135
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCIGQKI---SSLINVINKL 307
P KG + + G GKT ++ I N K+ + ++ +G++ + + + +
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIALKHEGLSVFAGVGERTREGNDFYHEMQEA 195
Query: 308 KYYNCMDYT----VVVAATAADSAAEQYISPYTGCTIGEYFRDL-------GQDCLIIYD 356
N D++ +V + + +G T+ EYFRD G+D L+ D
Sbjct: 196 GVVNTEDFSKSKVAMVYGQMNEPPGNRLRVALSGLTMAEYFRDTKDPATGKGRDVLLFVD 255
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P V Y + + + + +++I + +G+
Sbjct: 256 NIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGMLQERITSTQSGS 302
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VG 471
+T+ + D+T P + D + L ++ + PA++ S SR V
Sbjct: 303 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDSTSRQLDPQVI 362
Query: 472 GAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
G Y + + ++ +L +Y+EL+ +L K +Y KI + Q H
Sbjct: 363 GEEHYNVARG----VQEILQRYKELKDIIAILGMDELSEEDKLVVYRARKIQRFLSQPFH 418
>gi|334132532|ref|ZP_08506289.1| ATP synthase beta subunit [Methyloversatilis universalis FAM5]
gi|333442498|gb|EGK70468.1| ATP synthase beta subunit [Methyloversatilis universalis FAM5]
Length = 467
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 229/332 (68%), Positives = 280/332 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G+++G++R V TG I PVG TLGRI++VLG PID G+
Sbjct: 48 EVQQQLGDGVVRTIALGSSDGLRRGMKVKGTGAAISVPVGTATLGRIMDVLGRPIDEAGD 107
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I + ++ IH PKF + ++L TGIKVIDL+CPF KGGKIGLFGGAGVGKTVNMM
Sbjct: 108 IATDERRAIHQKAPKFDELSPSVDLLPTGIKVIDLICPFAKGGKIGLFGGAGVGKTVNMM 167
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA + G SVF GVGER+REGNDFYHEM+ES VLDKV++++GQMNEP GNRLRVA
Sbjct: 168 ELINNIAKSYGGYSVFAGVGERTREGNDFYHEMEESKVLDKVAMVFGQMNEPPGNRLRVA 227
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLA+EMG+LQE
Sbjct: 228 LTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGRLQE 287
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 288 RITSTKVGSITSIQAVYVPADDLTDPSPATTFQHLDATVVLSRDIASLGIYPAVDPLDST 347
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+QLDP IVGEEHY VA +V+ LQ+YKEL+D
Sbjct: 348 SRQLDPLIVGEEHYSVARKVQSTLQRYKELRD 379
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 135/327 (41%), Gaps = 23/327 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T +PVG LGRI++ G ID R + + AP +
Sbjct: 68 GLRRGMKVKGTGAAISVPVGTATLGRIMDVLGRPIDEAGDIATDERRAIHQKAPKFDELS 127
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K+ ++ +G
Sbjct: 128 PSVDLLPTGIKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAKSYGGYSVFAGVG 187
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + ++++ +D +V + + TG T+ E FRD G+D L
Sbjct: 188 ERTREGNDFYHEMEESKVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFF 247
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + RL ER I +
Sbjct: 248 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGRLQER-------------ITSTKV 294
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 295 GSITSIQAVYVPADDLTDPSPATTFQHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPL 354
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
+ G Y + +K ++ L +Y+EL
Sbjct: 355 IVGEEHYSVARK----VQSTLQRYKEL 377
>gi|90581151|ref|ZP_01236950.1| ATP synthase subunit B [Photobacterium angustum S14]
gi|90437672|gb|EAS62864.1| ATP synthase subunit B [Vibrio angustum S14]
Length = 468
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/346 (67%), Positives = 284/346 (82%), Gaps = 7/346 (2%)
Query: 574 KNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGD 633
+N + +VQQQ+G +VR IA G ++G++R V +TG+PI PVG TLGRI+NVLG
Sbjct: 36 ENGTLVLEVQQQLGGGVVRGIAMGTSDGLRRGLSVENTGRPIEVPVGTATLGRIMNVLGQ 95
Query: 634 PIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGV 693
PID GEI +++ IH P + +Q +LETG+KVIDL+CPF KGGKIGLFGGAGV
Sbjct: 96 PIDECGEIGEQERYAIHREAPSYEDQSNVTELLETGVKVIDLICPFAKGGKIGLFGGAGV 155
Query: 694 GKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIY 746
GKTVNMMELI NIA++H G SVF GVGER+REGNDFY+EM+E+ V++ KV+++Y
Sbjct: 156 GKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYYEMQEAGVVNIEKPEESKVAMVY 215
Query: 747 GQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVG 806
GQMNEP GNRLRVALTGL++AE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVG
Sbjct: 216 GQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVG 275
Query: 807 YQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIA 866
YQPTLAEEMG LQERI+STK+G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA
Sbjct: 276 YQPTLAEEMGVLQERITSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIA 335
Query: 867 ELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LG+YPAIDPL+S S+ LDP +VG+EHY +A V+ LQ+YKELKD
Sbjct: 336 SLGLYPAIDPLDSTSRMLDPLVVGQEHYDIARGVQSLLQRYKELKD 381
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 156/374 (41%), Gaps = 42/374 (11%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T + E+PVG LGRI+N G+ ID + + R + + AP D+
Sbjct: 63 GLRRGLSVENTGRPIEVPVGTATLGRIMNVLGQPIDECGEIGEQERYAIHREAPSYEDQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCIG 294
+V E L TG+K ID + P KG + + G GKT ++ I N K+ + ++ +G
Sbjct: 123 NVTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVG 182
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGE 342
++ + YY + VV +S Q P TG T+ E
Sbjct: 183 ERTREGNDF-----YYEMQEAGVVNIEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAE 237
Query: 343 YFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKY 402
FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 238 RFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL--- 287
Query: 403 FLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAIN 462
+++I + +G++T+ + D+T P + D + L + + PAI+
Sbjct: 288 ---QERITSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPAID 344
Query: 463 VGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLY 515
S SR V G Y I + ++ +L +Y+EL+ +L K +
Sbjct: 345 PLDSTSRMLDPLVVGQEHYDIARG----VQSLLQRYKELKDIIAILGMDELSEEDKQAVS 400
Query: 516 NGEKISLLMKQKPH 529
KI + Q H
Sbjct: 401 RARKIERFLTQPYH 414
>gi|407937125|ref|YP_006852766.1| F0F1 ATP synthase subunit beta [Acidovorax sp. KKS102]
gi|407894919|gb|AFU44128.1| F0F1 ATP synthase subunit beta [Acidovorax sp. KKS102]
Length = 468
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/366 (62%), Positives = 288/366 (78%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + K + + L+ + +VQQQ+G+ +VRTIA G+++G++R +V +TG
Sbjct: 15 VVDVEFPRDQMPKVYDALKLEGSALTLEVQQQLGDGVVRTIALGSSDGLRRGIMVTNTGN 74
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG+PID +G + + + IH P + + +LETGIKVI
Sbjct: 75 PITVPVGKATLGRIMDVLGNPIDERGPVGQELTASIHRKAPAYDELSPSQELLETGIKVI 134
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 135 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 194
Query: 734 KESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
+S V++ KV+++YGQMNEP GNRLRVALTGL+IAE FR+ G+DVL F+DNIYR
Sbjct: 195 ADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYR 254
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 255 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDP 314
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLDST+VLSR IA LGIYPA+DPL+S S+QLDP +VGE+HY A V+ LQ+
Sbjct: 315 SPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGEDHYTTARAVQGTLQR 374
Query: 907 YKELKD 912
YKEL+D
Sbjct: 375 YKELRD 380
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 132/323 (40%), Gaps = 40/323 (12%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + + ++ + AP + E L TGIK ID +
Sbjct: 78 VPVGKATLGRIMDVLGNPIDERGPVGQELTASIHRKAPAYDELSPSQELLETGIKVIDLV 137
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKI------------S 298
P KG + + G GKT ++ I N K + + ++ +G++ S
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADS 197
Query: 299 SLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDL 358
++N+ N + M Y + + TG TI E FRD G+D L D++
Sbjct: 198 GVVNLENLGESKVAMVY-----GQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNI 252
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P + + RL ER I + G++T
Sbjct: 253 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKVGSIT 299
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L ++ + PA++ S SR V G
Sbjct: 300 SIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGE 359
Query: 474 AQYKIVKKLSGDIRIMLAQYREL 496
Y + + G L +Y+EL
Sbjct: 360 DHYTTARAVQG----TLQRYKEL 378
>gi|118594197|ref|ZP_01551544.1| F0F1 ATP synthase subunit beta [Methylophilales bacterium HTCC2181]
gi|118439975|gb|EAV46602.1| F0F1 ATP synthase subunit beta [Methylophilales bacterium HTCC2181]
Length = 474
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/339 (67%), Positives = 281/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G+++G+ R T TG PI PVG+ TLGRI++VLG PID GE
Sbjct: 49 EVQQQLGDGIVRTIAMGSSDGLSRGTQFSSTGAPIQVPVGEGTLGRIMDVLGRPIDEVGE 108
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+SK+ IH P F++ + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNM+
Sbjct: 109 IDSKEFRSIHQKAPAFNDLSPSIELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNML 168
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA +H G SVF GVGER+REGNDFYHEM E+ V+ KV++++GQMNEP
Sbjct: 169 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMAEAGVIQLKNMKESKVAMVFGQMNEPP 228
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVAL+GL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLA+
Sbjct: 229 GNRLRVALSGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAD 288
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA
Sbjct: 289 EMGRLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIASLGIYPA 348
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKEL+D
Sbjct: 349 VDPLDSTSRQLDPQVVGEEHYSVARAVQSTLQRYKELRD 387
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 137/334 (41%), Gaps = 30/334 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G + T ++PVG LGRI++ G ID + K ++ + AP D
Sbjct: 69 GLSRGTQFSSTGAPIQVPVGEGTLGRIMDVLGRPIDEVGEIDSKEFRSIHQKAPAFNDLS 128
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID M P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 129 PSIELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMLELINNIAKQHSGLSVFAGVG 188
Query: 295 QKISSLINVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
++ + +++ + +V + + +G T+ E FRD
Sbjct: 189 ERTREGNDFYHEMAEAGVIQLKNMKESKVAMVFGQMNEPPGNRLRVALSGLTMAEKFRDE 248
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 249 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGRLQER------------ 296
Query: 408 KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSV 467
I + G++T+ + D+T P D + L ++ + PA++ S
Sbjct: 297 -ITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIASLGIYPAVDPLDST 355
Query: 468 SR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
SR V G Y + + ++ L +Y+EL
Sbjct: 356 SRQLDPQVVGEEHYSVARA----VQSTLQRYKEL 385
>gi|386829246|ref|ZP_10116353.1| proton translocating ATP synthase, F1 alpha subunit [Beggiatoa alba
B18LD]
gi|386430130|gb|EIJ43958.1| proton translocating ATP synthase, F1 alpha subunit [Beggiatoa alba
B18LD]
Length = 516
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 226/411 (54%), Positives = 311/411 (75%), Gaps = 7/411 (1%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ ++L++G CT ++ E+PVG ELLGR+VNS G+ +D K +E+I
Sbjct: 76 AVVLGAYEHLSEGDTVKCTGRVLEVPVGPELLGRVVNSLGQPLDGKGPINATLSSPIERI 135
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+K+ID+M+P+G+GQRELIIGDRQTGKT +A+D IINQK +
Sbjct: 136 APGVISRQSVSQPVQTGLKAIDAMVPVGRGQRELIIGDRQTGKTAVAVDAIINQKGTGIK 195
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK SS+ NV+ KL+ + +++T+VVAA+A+D AA Q+I+PY GC +GEYFRD
Sbjct: 196 CVYVAIGQKASSIANVVRKLEEHGALEHTIVVAASASDPAALQFIAPYAGCAMGEYFRDR 255
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 256 GEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARLNADYVEKI 315
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQI+L+T+LFNS RPAIN GL
Sbjct: 316 TNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIYLETDLFNSGIRPAINAGL 375
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G +R+ LAQ+REL +F++F+SDLD T+ Q+ G++++ LMK
Sbjct: 376 SVSRVGGAAQTKIIKKLGGGVRLSLAQFRELAAFAQFASDLDDSTRKQIERGQRVTELMK 435
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIINLKNN 576
QK + S+ E+ I L + +P+K++ FE ++ Y +KNN
Sbjct: 436 QKQYSPLSVAEMAISLYAANEGYLDDVPVKKVVDFEKSLHIY-----MKNN 481
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 157/342 (45%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G + V TG+ + PVG LGR++N LG P+D KG IN+ SPI
Sbjct: 74 VGAVVLGAYEHLSEGDTVKCTGRVLEVPVGPELLGRVVNSLGQPLDGKGPINATLSSPIE 133
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P ++ + ++TG+K ID + P +G + + G GKT ++ I I
Sbjct: 134 RIAPGVISRQSVSQPVQTGLKAIDAMVPVGRGQRELIIGDRQTGKTAVAVDAI----INQ 189
Query: 711 KGCS---VFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V++ +G+++ + +++E L+ ++ ++P+ + G ++
Sbjct: 190 KGTGIKCVYVAIGQKASSIANVVRKLEEHGALEHTIVVAASASDPAALQFIAPYAGCAMG 249
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY-------QPTLAEEMGKLQ- 819
E FR+ G+D L+ D++ + A +VS +L R P Y L E +L
Sbjct: 250 EYFRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARLNA 309
Query: 820 ---ERISS----TKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
E+I++ K G++T++ I A D++ P+ + D I L + GI P
Sbjct: 310 DYVEKITNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIYLETDLFNSGIRP 369
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
AI+ S S+ + G K+ + V+ L +++EL
Sbjct: 370 AINAGLSVSR-----VGGAAQTKIIKKLGGGVRLSLAQFREL 406
>gi|408375333|ref|ZP_11173004.1| ATP synthase subunit alpha [Alcanivorax hongdengensis A-11-3]
gi|407764779|gb|EKF73245.1| ATP synthase subunit alpha [Alcanivorax hongdengensis A-11-3]
Length = 514
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 227/403 (56%), Positives = 304/403 (75%), Gaps = 2/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D L +GQK CT +I E+P G ELLGR+V++ G +D K K + VEK+
Sbjct: 74 AVVLGDYLGLAEGQKVKCTGRILEVPTGPELLGRVVDALGNPVDGKGPIDAKTTDAVEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+ VNEP+ TG K+IDSM+PIG+GQRELIIGDRQ GKT +A+D II QK V
Sbjct: 134 APGVIWRKEVNEPVQTGYKAIDSMVPIGRGQRELIIGDRQIGKTAVAVDAIIAQKGTGVK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK S++ NV+ KL+ + +++T++VAA+A+D A+ Q+++P+ GC +GEYFRD
Sbjct: 194 CIYVAVGQKQSTIANVVRKLEEHGALEHTIIVAASASDPASMQFLAPFAGCAMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++K+N+ ++E+
Sbjct: 254 GEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKVNEDYVEQF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+TNLFNS RPA+N G+
Sbjct: 314 TNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETNLFNSGIRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQYREL +F++F+SDLD T+ QL +G+ ++ LMK
Sbjct: 374 SVSRVGGAAQTKIIKKLGGGIRLALAQYRELAAFAQFASDLDDSTREQLEHGQAVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
QK + SI E+ ++L + I +++I FE ++ Y
Sbjct: 434 QKQYSPMSIAEMGVVLYAANEGYLKGIEVEKIGAFESALLDYL 476
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 154/345 (44%), Gaps = 31/345 (8%)
Query: 588 ENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKS 647
++ V + G+ G+ V TG+ + P G LGR+++ LG+P+D KG I++K
Sbjct: 69 QDSVGAVVLGDYLGLAEGQKVKCTGRILEVPTGPELLGRVVDALGNPVDGKGPIDAKTTD 128
Query: 648 PIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIA 707
+ + P + N ++TG K ID + P +G + + G +GKT ++ I
Sbjct: 129 AVEKVAPGVIWRKEVNEPVQTGYKAIDSMVPIGRGQRELIIGDRQIGKTAVAVDAI---- 184
Query: 708 IEHKGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGL 764
I KG V ++ VG++ + +++E L+ ++ ++P+ + G
Sbjct: 185 IAQKGTGVKCIYVAVGQKQSTIANVVRKLEEHGALEHTIIVAASASDPASMQFLAPFAGC 244
Query: 765 SIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISS 824
++ E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 245 AMGEYFRDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAK 304
Query: 825 T---------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELG 869
K G++T++ I D++ P+ + D I L + G
Sbjct: 305 VNEDYVEQFTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETNLFNSG 364
Query: 870 IYPAIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
I PA++ S S+ + G K+ + ++ L +Y+EL
Sbjct: 365 IRPAMNAGISVSR-----VGGAAQTKIIKKLGGGIRLALAQYREL 404
>gi|398804708|ref|ZP_10563699.1| ATP synthase, F1 beta subunit [Polaromonas sp. CF318]
gi|398093317|gb|EJL83703.1| ATP synthase, F1 beta subunit [Polaromonas sp. CF318]
Length = 468
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/366 (62%), Positives = 286/366 (78%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + K + + ++ + +VQQQ+G+ IVRTIA G ++G++R +V +TG
Sbjct: 15 VVDVEFARDQMPKIYDALKMEGSALTLEVQQQLGDGIVRTIALGTSDGLRRGNVVYNTGA 74
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
I PVG TLGRI++VLG PID +G ++ +PIH P + + +LETGIKVI
Sbjct: 75 NITVPVGKATLGRIMDVLGSPIDERGPVDQTLTAPIHRKAPAYDELSPSQELLETGIKVI 134
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 135 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 194
Query: 734 KESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
+S V++ KV+++YGQMNEP GNRLRVALTGL+IAE FR+ G+DVL F+DNIYR
Sbjct: 195 ADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYR 254
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 255 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDP 314
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLDST+VLSR IA LGIYPA+DPL+S S+QLDP +VGE+HY A V+ LQ+
Sbjct: 315 SPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGEDHYNTARAVQGTLQR 374
Query: 907 YKELKD 912
YKEL+D
Sbjct: 375 YKELRD 380
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 135/339 (39%), Gaps = 40/339 (11%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG LGRI++ G ID + + + AP +
Sbjct: 62 GLRRGNVVYNTGANITVPVGKATLGRIMDVLGSPIDERGPVDQTLTAPIHRKAPAYDELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 122 PSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 181
Query: 295 QKI------------SSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGE 342
++ S ++N+ N + M Y + + TG TI E
Sbjct: 182 ERTREGNDFYHEMADSGVVNLENLGESKVAMVY-----GQMNEPPGNRLRVALTGLTIAE 236
Query: 343 YFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKY 402
FRD G+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 237 SFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------- 289
Query: 403 FLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAIN 462
I + G++T+ + D+T P + D + L ++ + PA++
Sbjct: 290 ------ITSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVD 343
Query: 463 VGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
S SR V G Y + + G L +Y+EL
Sbjct: 344 PLDSTSRQLDPNVVGEDHYNTARAVQG----TLQRYKEL 378
>gi|254468235|ref|ZP_05081641.1| ATP synthase F1, beta subunit [beta proteobacterium KB13]
gi|207087045|gb|EDZ64328.1| ATP synthase F1, beta subunit [beta proteobacterium KB13]
Length = 477
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 229/339 (67%), Positives = 281/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVR IA G+T+G+ R T TG PI PVG+ TLGRI++VLG PID G+
Sbjct: 52 EVQQQLGDGIVRAIAMGSTDGLARGTQFTSTGAPIQVPVGEGTLGRIMDVLGRPIDEVGK 111
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I++K+ IH P+FS + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNM+
Sbjct: 112 IDTKEHRSIHQKAPEFSELSPSVELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNML 171
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVL-------DKVSLIYGQMNEPS 753
ELI NIA +H G SVF GVGER+REGNDFYHEM ++ V+ KV++++GQMNEP
Sbjct: 172 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMSDAGVIKLDDMKESKVAMVFGQMNEPP 231
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVAL+GL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLA+
Sbjct: 232 GNRLRVALSGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAD 291
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA
Sbjct: 292 EMGRLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIASLGIYPA 351
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP IVGE+HY+VA V+ LQKYKEL+D
Sbjct: 352 VDPLDSTSRQLDPQIVGEDHYQVARRVQATLQKYKELRD 390
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 142/342 (41%), Gaps = 30/342 (8%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + L +G + T ++PVG LGRI++ G ID K K ++ +
Sbjct: 64 AIAMGSTDGLARGTQFTSTGAPIQVPVGEGTLGRIMDVLGRPIDEVGKIDTKEHRSIHQK 123
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP + E L TGIK ID + P KG + + G GKT ++ I N K +
Sbjct: 124 APEFSELSPSVELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMLELINNIAKQHSG 183
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISP-------YTGCT 339
+ ++ +G++ + +++ + + + A + P +G T
Sbjct: 184 LSVFAGVGERTREGNDFYHEMSDAGVIKLDDMKESKVAMVFGQMNEPPGNRLRVALSGLT 243
Query: 340 IGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKI 399
+ E FRD G+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 244 MAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGRLQER---- 299
Query: 400 NKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRP 459
I + G++T+ + D+T P D + L ++ + P
Sbjct: 300 ---------ITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIASLGIYP 350
Query: 460 AINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
A++ S SR + G Y++ ++ ++ L +Y+EL
Sbjct: 351 AVDPLDSTSRQLDPQIVGEDHYQVARR----VQATLQKYKEL 388
>gi|258623013|ref|ZP_05718027.1| ATP synthase subunit B [Vibrio mimicus VM573]
gi|258625009|ref|ZP_05719932.1| ATP synthase subunit B [Vibrio mimicus VM603]
gi|262166762|ref|ZP_06034499.1| ATP synthase beta chain [Vibrio mimicus VM223]
gi|262172741|ref|ZP_06040419.1| ATP synthase beta chain [Vibrio mimicus MB-451]
gi|424810915|ref|ZP_18236249.1| F0F1 ATP synthase subunit beta [Vibrio mimicus SX-4]
gi|449144936|ref|ZP_21775747.1| ATP synthase subunit beta [Vibrio mimicus CAIM 602]
gi|258582707|gb|EEW07533.1| ATP synthase subunit B [Vibrio mimicus VM603]
gi|258584716|gb|EEW09451.1| ATP synthase subunit B [Vibrio mimicus VM573]
gi|261893817|gb|EEY39803.1| ATP synthase beta chain [Vibrio mimicus MB-451]
gi|262026478|gb|EEY45146.1| ATP synthase beta chain [Vibrio mimicus VM223]
gi|342321926|gb|EGU17722.1| F0F1 ATP synthase subunit beta [Vibrio mimicus SX-4]
gi|449079456|gb|EMB50379.1| ATP synthase subunit beta [Vibrio mimicus CAIM 602]
Length = 467
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 229/339 (67%), Positives = 278/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G ++R I G+++G++R V +TG PI PVG TLGRI+NVLGD ID +G+
Sbjct: 42 EVQQQLGGGVIRAIVMGSSDGLRRGMTVQNTGAPISVPVGTKTLGRIMNVLGDAIDERGD 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q +LETG+KVIDL+CPF KGGKIGLFGGAGVGKTVNMM
Sbjct: 102 IGAEEVYSIHRAAPSYEEQSSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV-------LDKVSLIYGQMNEPS 753
ELI NIA++H G SVF GVGER+REGNDFYHEM+E+ V L KV+++YGQMNEP
Sbjct: 162 ELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNVEQPELSKVAMVYGQMNEPP 221
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 222 GNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 281
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VL+R IA +G+YPA
Sbjct: 282 EMGVLQERITSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPA 341
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IDPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 342 IDPLDSTSRQLDPLVVGQEHYDVARGVQATLQRYKELKD 380
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 157/377 (41%), Gaps = 32/377 (8%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+++ L +G T +PVG + LGRI+N G+ ID + + ++ +
Sbjct: 54 AIVMGSSDGLRRGMTVQNTGAPISVPVGTKTLGRIMNVLGDAIDERGDIGAEEVYSIHRA 113
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP ++ S E L TG+K ID + P KG + + G GKT ++ I N +
Sbjct: 114 APSYEEQSSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSG 173
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCT 339
+ ++ +G++ + ++++ ++ +V + + TG T
Sbjct: 174 LSVFAGVGERTREGNDFYHEMQEAGVVNVEQPELSKVAMVYGQMNEPPGNRLRVALTGLT 233
Query: 340 IGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKI 399
+ E FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 234 MAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL 286
Query: 400 NKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRP 459
+++I + G++T+ + D+T P + D + L+ N+ P
Sbjct: 287 ------QERITSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYP 340
Query: 460 AINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKT 512
AI+ S SR V G Y + + ++ L +Y+EL+ +L K
Sbjct: 341 AIDPLDSTSRQLDPLVVGQEHYDVARG----VQATLQRYKELKDIIAILGMDELSEADKQ 396
Query: 513 QLYNGEKISLLMKQKPH 529
+ KI + Q H
Sbjct: 397 VVARARKIERFLTQPYH 413
>gi|134301276|ref|YP_001121244.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
tularensis WY96-3418]
gi|421750994|ref|ZP_16188053.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
tularensis AS_713]
gi|421752850|ref|ZP_16189861.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
tularensis 831]
gi|421756582|ref|ZP_16193486.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
tularensis 80700103]
gi|421758447|ref|ZP_16195294.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
tularensis 70102010]
gi|424673685|ref|ZP_18110619.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
tularensis 70001275]
gi|158513844|sp|A4IW22.1|ATPA_FRATW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|134049053|gb|ABO46124.1| ATP synthase F1, alpha subunit [Francisella tularensis subsp.
tularensis WY96-3418]
gi|409089212|gb|EKM89264.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
tularensis 831]
gi|409089305|gb|EKM89356.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
tularensis AS_713]
gi|409092345|gb|EKM92321.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
tularensis 70102010]
gi|409093451|gb|EKM93396.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
tularensis 80700103]
gi|417435680|gb|EKT90559.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
tularensis 70001275]
Length = 513
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/396 (58%), Positives = 303/396 (76%), Gaps = 2/396 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++ +G K +C +I E+PVG LLGR+V++ G ID K + +EKI
Sbjct: 73 AVVLGDYEHIKEGDKAYCIGRILEVPVGEALLGRVVDALGNPIDGKGEVATDLTSPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++ L TGIKSIDSM+PIG+GQRELIIGDRQ GKT IA+DTIINQK V
Sbjct: 133 APGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTIINQKGTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S++ N++ +L+ + M++T++VAATA+DSAA QYI+PY GC++GEYFRD
Sbjct: 193 CIYVAIGQKASTIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N+ ++EK
Sbjct: 253 GQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GD+++F+PTNVISITDGQIFL+T+LFNS RPAIN G
Sbjct: 313 TNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRPAINPGN 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQYRELE+FS+F+SDLD T+ QL G++++ L+K
Sbjct: 373 SVSRVGGAAQTKIIKKLGGGIRLALAQYRELEAFSQFASDLDEATRAQLNRGQRVTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFE 561
QK S+ + + L N + + + ++ FE
Sbjct: 433 QKQFSTLSVALMALSLYAADNGYLDNLEVSEVIPFE 468
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 157/343 (45%), Gaps = 31/343 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ IK G+ + PVG+ LGR+++ LG+PID KGE+ + SPI
Sbjct: 71 VGAVVLGDYEHIKEGDKAYCIGRILEVPVGEALLGRVVDALGNPIDGKGEVATDLTSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TGIK ID + P +G + + G +GKT ++ I I
Sbjct: 131 KIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTI----INQ 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ +G+++ + +++E ++ ++ ++ + + G S+
Sbjct: 187 KGTGVKCIYVAIGQKASTIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 247 EYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNE 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + G+ P
Sbjct: 307 EYVEKFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKELK 911
AI+P S S+ + G K+ + ++ L +Y+EL+
Sbjct: 367 AINPGNSVSR-----VGGAAQTKIIKKLGGGIRLALAQYRELE 404
>gi|90023606|ref|YP_529433.1| F0F1 ATP synthase subunit beta [Saccharophagus degradans 2-40]
gi|118573741|sp|Q21DK8.1|ATPB_SACD2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|89953206|gb|ABD83221.1| ATP synthase F1, beta subunit [Saccharophagus degradans 2-40]
Length = 470
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/363 (64%), Positives = 285/363 (78%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + + + +VQQQ+G+ +VR IA G + G+ R V +TG PI
Sbjct: 16 VEFPRDSVPKVYDALTVADKGLTLEVQQQLGDGVVRAIAMGGSEGVSRGLAVENTGAPIN 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG+PID KG IN +++ IH PK+ + +L TGIKVIDL+
Sbjct: 76 VPVGTATLGRIMDVLGNPIDEKGPINETERASIHRKAPKYDELAASEELLATGIKVIDLV 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA EH G SVF GVGER+REGNDFY EM+E+
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIATEHSGLSVFAGVGERTREGNDFYFEMQEA 195
Query: 737 NVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
V++ KV+++YGQMNEP GNRLRVALTGL++AE+FR+ GKDVLLF+DNIYR+TL
Sbjct: 196 GVVNVDKFDESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLLFVDNIYRYTL 255
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+
Sbjct: 256 AGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPA 315
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLDST+VLSR IA GIYPAIDPL+S S+QLDP I+G+EHY A V+ LQ+YKE
Sbjct: 316 TTFAHLDSTVVLSRDIAAKGIYPAIDPLDSSSRQLDPLIIGQEHYDTARGVQSVLQRYKE 375
Query: 910 LKD 912
LKD
Sbjct: 376 LKD 378
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 143/345 (41%), Gaps = 34/345 (9%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + + +++G T +PVG LGRI++ G ID K R ++ +
Sbjct: 52 AIAMGGSEGVSRGLAVENTGAPINVPVGTATLGRIMDVLGNPIDEKGPINETERASIHRK 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV- 286
AP + + E L TGIK ID + P KG + + G GKT ++ I N ++
Sbjct: 112 APKYDELAASEELLATGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIATEHSG 171
Query: 287 ICIYVCIGQKIS---------SLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTG 337
+ ++ +G++ V+N K+ +V + + TG
Sbjct: 172 LSVFAGVGERTREGNDFYFEMQEAGVVNVDKFDES--KVAMVYGQMNEPPGNRLRVALTG 229
Query: 338 CTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSS 397
T+ E FRD G+D L+ D++ ++ A ++S LL R P + L E
Sbjct: 230 LTMAEKFRDEGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMG 282
Query: 398 KINKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNY 457
+ +++I + G++T+ + D+T P + D + L ++
Sbjct: 283 VL------QERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGI 336
Query: 458 RPAINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
PAI+ S SR + G Y + ++ +L +Y+EL+
Sbjct: 337 YPAIDPLDSSSRQLDPLIIGQEHYDTARG----VQSVLQRYKELK 377
>gi|221069422|ref|ZP_03545527.1| ATP synthase F1, alpha subunit [Comamonas testosteroni KF-1]
gi|220714445|gb|EED69813.1| ATP synthase F1, alpha subunit [Comamonas testosteroni KF-1]
Length = 519
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/404 (57%), Positives = 303/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ +++ +G CT +I E+PVG EL+GR+VN+ G+ ID K K + +EK+
Sbjct: 78 AVILGAYEHIAEGNTVKCTGRILEVPVGPELVGRVVNALGQPIDGKGPINAKMTDVIEKV 137
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++PL TGIKSIDSM+P+G+GQRELIIGDRQTGKT +AID IINQK + V
Sbjct: 138 APGVIARQSVDQPLQTGIKSIDSMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQGVT 197
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ NV+ L+ MDYT+VVAATA++SAA QY+S Y+GCT+GEYFRD
Sbjct: 198 CIYVAIGQKASSIKNVVRALEQAGAMDYTIVVAATASESAAMQYVSAYSGCTMGEYFRDR 257
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDL+K A AYRQ+SLLLRRPPGREAFPGDVFYLHSRLLER++++N ++E
Sbjct: 258 GEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHSRLLERAARVNADYVEAF 317
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 318 TKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSLFNAGIRPAINAGI 377
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGG+AQ K+VK LSG IR LAQYREL +F++F+SDLD T+ QL G +++ L+K
Sbjct: 378 SVSRVGGSAQTKVVKGLSGGIRTDLAQYRELAAFAQFASDLDEATRKQLDRGARVTELLK 437
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q + S + L + F I +KQ+ FE + ++ +
Sbjct: 438 QAQYSPLSTALMASSLFAVNKGFMDDIEVKQVLPFESGLHQFLK 481
Score = 109 bits (272), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 154/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I V TG+ + PVG +GR++N LG PID KG IN+K I
Sbjct: 76 VGAVILGAYEHIAEGNTVKCTGRILEVPVGPELVGRVVNALGQPIDGKGPINAKMTDVIE 135
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TGIK ID + P +G + + G GKT ++ I N +
Sbjct: 136 KVAPGVIARQSVDQPLQTGIKSIDSMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQG 195
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ + ++++ +D ++ +E + + A +G ++ E F
Sbjct: 196 VTC-IYVAIGQKASSIKNVVRALEQAGAMDYTIVVAATASESAAMQYVSAYSGCTMGEYF 254
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + +A +VS +L R P + + +L ER +
Sbjct: 255 RDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHSRLLERAARVNADYV 314
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 315 EAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSLFNAGIRPAIN 374
Query: 876 PLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
S S+ + G KV + ++ L +Y+EL
Sbjct: 375 AGISVSR-----VGGSAQTKVVKGLSGGIRTDLAQYREL 408
>gi|1168571|sp|P42468.1|ATPB_BURCE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|587502|emb|CAA54204.1| ATPase beta-subunit [Burkholderia cepacia]
Length = 463
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 274/332 (82%), Gaps = 1/332 (0%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R V +T KPI PVG TLGRI++VLG PID G
Sbjct: 45 EVQQQLGDGVVRTICLGASDGLRRGLTVKNTSKPISVPVGKPTLGRIMDVLGRPIDEAGP 104
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S+ IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 105 IESEHTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 164
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRV
Sbjct: 165 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRV- 223
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 224 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 283
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 284 RITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 343
Query: 881 SKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S+Q+DP ++GEEHY + V+ LQ+YKEL+D
Sbjct: 344 SRQIDPNVIGEEHYSITRRVQQTLQRYKELRD 375
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 149/362 (41%), Gaps = 26/362 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID ++ ++ + AP +
Sbjct: 65 GLRRGLTVKNTSKPISVPVGKPTLGRIMDVLGRPIDEAGPIESEHTRSIHQKAPAFDELS 124
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 125 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 184
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + + TG T+ E+FRD G D L
Sbjct: 185 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNR-LRVLTGLTMAEHFRDEGLDVLFF 243
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 244 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKK 290
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 291 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPN 350
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQK 527
V G Y I ++ ++ L +Y+EL +L K + KI + Q
Sbjct: 351 VIGEEHYSITRR----VQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQP 406
Query: 528 PH 529
H
Sbjct: 407 FH 408
>gi|29655227|ref|NP_820919.1| ATP synthase F0F1 subunit alpha [Coxiella burnetii RSA 493]
gi|153206131|ref|ZP_01945394.1| ATP synthase F1, alpha subunit [Coxiella burnetii 'MSU Goat Q177']
gi|154705840|ref|YP_001423604.1| F0F1 ATP synthase subunit alpha [Coxiella burnetii Dugway
5J108-111]
gi|161831117|ref|YP_001597759.1| F0F1 ATP synthase subunit alpha [Coxiella burnetii RSA 331]
gi|165918749|ref|ZP_02218835.1| ATP synthase F1, alpha subunit [Coxiella burnetii Q321]
gi|212211721|ref|YP_002302657.1| F0F1 ATP synthase subunit alpha [Coxiella burnetii CbuG_Q212]
gi|212217736|ref|YP_002304523.1| F0F1 ATP synthase subunit alpha [Coxiella burnetii CbuK_Q154]
gi|81722487|sp|Q83AF7.1|ATPA_COXBU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|189081295|sp|A9KBF9.1|ATPA_COXBN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|189081296|sp|A9NBC8.1|ATPA_COXBR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|226739864|sp|B6J961.1|ATPA_COXB1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|226739865|sp|B6J2D8.1|ATPA_COXB2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|29542499|gb|AAO91433.1| ATP synthase alpha chain [Coxiella burnetii RSA 493]
gi|120577261|gb|EAX33885.1| ATP synthase F1, alpha subunit [Coxiella burnetii 'MSU Goat Q177']
gi|154355126|gb|ABS76588.1| ATP synthase alpha chain [Coxiella burnetii Dugway 5J108-111]
gi|161762984|gb|ABX78626.1| ATP synthase F1, alpha subunit [Coxiella burnetii RSA 331]
gi|165917577|gb|EDR36181.1| ATP synthase F1, alpha subunit [Coxiella burnetii Q321]
gi|212010131|gb|ACJ17512.1| ATP synthase alpha chain [Coxiella burnetii CbuG_Q212]
gi|212011998|gb|ACJ19378.1| ATP synthase alpha chain [Coxiella burnetii CbuK_Q154]
Length = 515
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/405 (57%), Positives = 312/405 (77%), Gaps = 4/405 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ ++L +G CT +I E+PVG LLGR+V+ G+ ID K +EK+
Sbjct: 75 AVVMGPYEHLEEGMTARCTGRILEVPVGEALLGRVVDGLGKPIDGKGPIDTSETSPIEKV 134
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV+ L TG+KSID+M+PIG+GQRELIIGDRQTGKT IAIDTIINQK+ V
Sbjct: 135 APGVITRKSVDTSLPTGLKSIDAMVPIGRGQRELIIGDRQTGKTAIAIDTIINQKHTGVK 194
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ V+ KL+ + M++T+VV A+A+++AA QY++PY GCT+GEYFRD
Sbjct: 195 CIYVAIGQKQSSVAAVVRKLEEHGAMEHTIVVNASASEAAALQYLAPYAGCTMGEYFRDR 254
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLE-- 405
GQD LI+YDDLTK AWAYRQISLLLRRPPGREA+PGD+FYLHSRLLER++ +N+ +++
Sbjct: 255 GQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDIFYLHSRLLERAAHVNEAYVKEF 314
Query: 406 -KKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVG 464
K K+ K G+LTA PIIET GDV++FIPTNVISITDGQI+LD NLFN+ RPAIN G
Sbjct: 315 TKGKVTGK-TGSLTALPIIETQAGDVSAFIPTNVISITDGQIYLDVNLFNAGIRPAINAG 373
Query: 465 LSVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLM 524
LSVSRVGGAAQ KI+KKL G +RI LAQYRELE+FS+F+SDLD T+ QL +G+++ ++
Sbjct: 374 LSVSRVGGAAQTKIIKKLIGGLRIALAQYRELEAFSQFASDLDEATRKQLEHGQRVMEIL 433
Query: 525 KQKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
KQ ++ S+ E+ II ++ N + ++ +K++ FE +++ + R
Sbjct: 434 KQPQYQPLSVGEMAIIWYVVNNNYLDQVELKKVVDFERSLLSFLR 478
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 149/321 (46%), Gaps = 27/321 (8%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + PVG+ LGR+++ LG PID KG I++ + SPI + P + + L TG+
Sbjct: 93 TGRILEVPVGEALLGRVVDGLGKPIDGKGPIDTSETSPIEKVAPGVITRKSVDTSLPTGL 152
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCS-VFIGVGERSREGNDF 729
K ID + P +G + + G GKT ++ I N +H G +++ +G++
Sbjct: 153 KSIDAMVPIGRGQRELIIGDRQTGKTAIAIDTIIN--QKHTGVKCIYVAIGQKQSSVAAV 210
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
+++E ++ ++ +E + + G ++ E FR+ G+D L+ D++ +
Sbjct: 211 VRKLEEHGAMEHTIVVNASASEAAALQYLAPYAGCTMGEYFRDRGQDALIVYDDLTKQAW 270
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERIS---------------STKNGTITSVQ 834
A ++S +L R P Y + +L ER + + K G++T++
Sbjct: 271 AYRQISLLLRRPPGREAYPGDIFYLHSRLLERAAHVNEAYVKEFTKGKVTGKTGSLTALP 330
Query: 835 AIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHY 894
I A D++ P+ + D I L + GI PAI+ S S+ + G
Sbjct: 331 IIETQAGDVSAFIPTNVISITDGQIYLDVNLFNAGIRPAINAGLSVSR-----VGGAAQT 385
Query: 895 KVANE----VKFYLQKYKELK 911
K+ + ++ L +Y+EL+
Sbjct: 386 KIIKKLIGGLRIALAQYRELE 406
>gi|152998459|ref|YP_001343294.1| ATP synthase F1 subunit alpha [Marinomonas sp. MWYL1]
gi|190358156|sp|A6W3T0.1|ATPA2_MARMS RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
synthase F1 sector subunit alpha 2; AltName:
Full=F-ATPase subunit alpha 2
gi|150839383|gb|ABR73359.1| ATP synthase F1, alpha subunit [Marinomonas sp. MWYL1]
Length = 514
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 235/416 (56%), Positives = 309/416 (74%), Gaps = 2/416 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ ++L +GQK CT +I E+P+G ELLGR+V++ G ID K K + VEK+
Sbjct: 74 AVVLGKYQDLVEGQKVKCTGRILEVPIGPELLGRVVDALGNPIDGKGAINAKLTDKVEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG+++R+SV++P+ TG K+ID+M+PIG+GQRELIIGDRQ GKT +AIDTII QK+ +
Sbjct: 134 APGVIERQSVDQPIQTGYKAIDAMVPIGRGQRELIIGDRQIGKTALAIDTIIAQKDSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ M+YT VVAA A+D AA YI+PYTGCT+GEYFRD
Sbjct: 194 CVYVAIGQKQSTIANVVRKLEEAGAMEYTTVVAAGASDPAAMLYIAPYTGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++EK
Sbjct: 254 GEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNVDYVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+ FN+ RPA+N G+
Sbjct: 314 TNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETSSFNAGIRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KIVKKL G IR+ LAQYREL +F++F+SDLD T+ QL +G++++ LMK
Sbjct: 374 SVSRVGGAAQTKIVKKLGGGIRLALAQYRELAAFAQFASDLDEATRKQLEHGKQVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIINLKNNISINK 581
QK S+ ++ ++L + F + +I FE ++ Y + INK
Sbjct: 434 QKQFSPMSVADMGVVLYAANDGFLEDVETSKIGSFETALLSYMNSEHTDLMADINK 489
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 148/320 (46%), Gaps = 27/320 (8%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + P+G LGR+++ LG+PID KG IN+K + + P + + ++TG
Sbjct: 92 TGRILEVPIGPELLGRVVDALGNPIDGKGAINAKLTDKVEKVAPGVIERQSVDQPIQTGY 151
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCS-VFIGVGERSREGNDF 729
K ID + P +G + + G +GKT ++ I IA + G V++ +G++ +
Sbjct: 152 KAIDAMVPIGRGQRELIIGDRQIGKTALAIDTI--IAQKDSGIKCVYVAIGQKQSTIANV 209
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
+++E+ ++ +++ ++P+ TG ++ E FR+ G+D L+ D++ +
Sbjct: 210 VRKLEEAGAMEYTTVVAAGASDPAAMLYIAPYTGCTMGEYFRDRGEDALIIYDDLTKQAW 269
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST---------------KNGTITSVQ 834
A ++S +L R P Y + +L ER S K G++T++
Sbjct: 270 AYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNVDYVEKFTNGEVKGKTGSLTALP 329
Query: 835 AIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHY 894
I D++ P+ + D I L GI PA++ S S+ + G
Sbjct: 330 IIETQGGDVSAFVPTNVISITDGQIFLETSSFNAGIRPAMNAGISVSR-----VGGAAQT 384
Query: 895 KVANE----VKFYLQKYKEL 910
K+ + ++ L +Y+EL
Sbjct: 385 KIVKKLGGGIRLALAQYREL 404
>gi|337754578|ref|YP_004647089.1| ATP synthase subunit alpha [Francisella sp. TX077308]
gi|336446183|gb|AEI35489.1| ATP synthase alpha chain [Francisella sp. TX077308]
Length = 513
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 229/396 (57%), Positives = 304/396 (76%), Gaps = 2/396 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++ +G K +CT +I E+PVG LLGR+V++ G ID K + + +EKI
Sbjct: 73 AVVLGEYEHIREGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEIETDHSSPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++ L TG+KSIDSM+PIG+GQRELIIGDRQ GKT IAID IINQK V
Sbjct: 133 APGVIWRKSVDQALQTGVKSIDSMVPIGRGQRELIIGDRQIGKTAIAIDAIINQKGTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ N++ +L+ + M++T++VAATA+DSAA QYI+PY GC++GEYFRD
Sbjct: 193 CIYVAIGQKASSIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D L++YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N+ ++EK
Sbjct: 253 GEDALVVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GD+++F+PTNVISITDGQIFL+T+LFNS RPAIN G
Sbjct: 313 TNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRPAINPGN 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQ+RELE+FS+F+SDLD T+ QL G++++ L+K
Sbjct: 373 SVSRVGGAAQTKIIKKLGGGIRLALAQFRELEAFSQFASDLDEATRAQLNRGQRVTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFE 561
QK SI + + L N + + + ++ FE
Sbjct: 433 QKQFSTLSIALMALSLYAADNGYLDSLEVSEVIPFE 468
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 157/343 (45%), Gaps = 31/343 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I+ TG+ + PVG+ LGR+++ LG+PID KGEI + SPI
Sbjct: 71 VGAVVLGEYEHIREGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEIETDHSSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TG+K ID + P +G + + G +GKT ++ I I
Sbjct: 131 KIAPGVIWRKSVDQALQTGVKSIDSMVPIGRGQRELIIGDRQIGKTAIAIDAI----INQ 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ +G+++ + +++E ++ ++ ++ + + G S+
Sbjct: 187 KGTGVKCIYVAIGQKASSIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 247 EYFRDRGEDALVVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNE 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + G+ P
Sbjct: 307 EYVEKFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKELK 911
AI+P S S+ + G K+ + ++ L +++EL+
Sbjct: 367 AINPGNSVSR-----VGGAAQTKIIKKLGGGIRLALAQFRELE 404
>gi|374621105|ref|ZP_09693639.1| proton translocating ATP synthase, F1 alpha subunit [gamma
proteobacterium HIMB55]
gi|374304332|gb|EHQ58516.1| proton translocating ATP synthase, F1 alpha subunit [gamma
proteobacterium HIMB55]
Length = 514
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 224/404 (55%), Positives = 303/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D K L +GQ C CT +I E+PVG EL GR+V++ G ID K + +EKI
Sbjct: 74 AVVLGDYKRLAEGQTCRCTGRILEVPVGPELQGRVVDALGNPIDGKGAIEATMTDAIEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ G+K+ID+M+PIG+GQRELIIGDRQ GKT IA+D IINQK +
Sbjct: 134 APGVIARQSVDQPVQIGLKAIDAMVPIGRGQRELIIGDRQVGKTAIAVDAIINQKGTGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK SS+ +V+ KL+ + MD+T+VVAA A+D AA Q+++P+ GCT+GEY+RD
Sbjct: 194 CIYVAVGQKASSVASVVRKLEEHGAMDHTIVVAANASDPAAMQFLAPFAGCTMGEYYRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N ++E
Sbjct: 254 GEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEAF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA P+IET GDV++F+PTNVISITDGQIFL+ ++FN+ RPA+N G+
Sbjct: 314 TNGEVKGQTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLEADMFNAGIRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKLSG IR LAQYREL +FS+F+SDLD TK QL +GE+++ LMK
Sbjct: 374 SVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFSQFASDLDEATKAQLEHGERVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK + S+ E+ ++L + + ++++ FE ++ Y
Sbjct: 434 QKQYAPQSVAEMGLLLYAANEGYLKAVEVEKVADFEAALLSYMH 477
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 166/379 (43%), Gaps = 39/379 (10%)
Query: 557 IELFEINIIKYFRIINLKNNI---SINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
I + + ++Y +I + N+ ++N + +G + G+ + TG+
Sbjct: 40 IRIHGLTEVQYGEMIEFEGNVFGLALNLERDSVG-----AVVLGDYKRLAEGQTCRCTGR 94
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
+ PVG GR+++ LG+PID KG I + I + P + + ++ G+K I
Sbjct: 95 ILEVPVGPELQGRVVDALGNPIDGKGAIEATMTDAIEKIAPGVIARQSVDQPVQIGLKAI 154
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSV---FIGVGERSREGNDFY 730
D + P +G + + G VGKT ++ I I KG + ++ VG+++
Sbjct: 155 DAMVPIGRGQRELIIGDRQVGKTAIAVDAI----INQKGTGIKCIYVAVGQKASSVASVV 210
Query: 731 HEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLA 790
+++E +D ++ ++P+ + G ++ E +R+ G+D L+ D++ + +A
Sbjct: 211 RKLEEHGAMDHTIVVAANASDPAAMQFLAPFAGCTMGEYYRDRGEDALIIYDDLSKQAVA 270
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST---------------KNGTITSVQA 835
++S +L R P Y + +L ER + + G++T++
Sbjct: 271 YRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEAFTNGEVKGQTGSLTALPV 330
Query: 836 IYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYK 895
I A D++ P+ + D I L + GI PA++ S S+ + G K
Sbjct: 331 IETQAGDVSAFVPTNVISITDGQIFLEADMFNAGIRPAMNAGISVSR-----VGGAAQTK 385
Query: 896 V----ANEVKFYLQKYKEL 910
+ + ++ L +Y+EL
Sbjct: 386 IIKKLSGGIRTALAQYREL 404
>gi|332529017|ref|ZP_08404983.1| F0F1 ATP synthase subunit beta [Hylemonella gracilis ATCC 19624]
gi|332041567|gb|EGI77927.1| F0F1 ATP synthase subunit beta [Hylemonella gracilis ATCC 19624]
Length = 471
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 228/363 (62%), Positives = 288/363 (79%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E ++ K + + ++ + +VQQQ+G+ +VRTIA G+++G++R +V +TGK I
Sbjct: 22 VEFPRDHMPKVYDALKMEGSALTLEVQQQLGDGVVRTIALGSSDGLRRGLMVTNTGKAIT 81
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG+PID +G + + + IH P + + +LETGIKVIDL+
Sbjct: 82 VPVGKATLGRIMDVLGNPIDERGPVAQTQTASIHRKAPAYDELSPSQELLETGIKVIDLV 141
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM ++
Sbjct: 142 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMSDA 201
Query: 737 NVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
V++ KV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVL F+DNIYR+TL
Sbjct: 202 GVVNQESLGDSKVAMVYGQMNEPPGNRLRVALTGLTMAEAFRDEGKDVLFFVDNIYRYTL 261
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+
Sbjct: 262 AGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDPSPA 321
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLDST+VLSR IA LGIYPA+DPL+S S+QLDP +VGE+HY A V+ LQ+YKE
Sbjct: 322 TTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGEDHYTTARAVQGTLQRYKE 381
Query: 910 LKD 912
L+D
Sbjct: 382 LRD 384
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 136/339 (40%), Gaps = 40/339 (11%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID + ++ + AP +
Sbjct: 66 GLRRGLMVTNTGKAITVPVGKATLGRIMDVLGNPIDERGPVAQTQTASIHRKAPAYDELS 125
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 126 PSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 185
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGE 342
++ + Y+ D VV + DS Q P TG T+ E
Sbjct: 186 ERTREGNDF-----YHEMSDAGVVNQESLGDSKVAMVYGQMNEPPGNRLRVALTGLTMAE 240
Query: 343 YFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKY 402
FRD G+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 241 AFRDEGKDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------- 293
Query: 403 FLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAIN 462
I + G++T+ + D+T P + D + L ++ + PA++
Sbjct: 294 ------ITSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVD 347
Query: 463 VGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
S SR V G Y + + G L +Y+EL
Sbjct: 348 PLDSTSRQLDPQVVGEDHYTTARAVQG----TLQRYKEL 382
>gi|198284881|ref|YP_002221202.1| F0F1 ATP synthase subunit alpha [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218665445|ref|YP_002427561.1| F0F1 ATP synthase subunit alpha [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|226739835|sp|B7JB86.1|ATPA_ACIF2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|226739836|sp|B5ER44.1|ATPA_ACIF5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|198249402|gb|ACH84995.1| ATP synthase F1, alpha subunit [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218517658|gb|ACK78244.1| ATP synthase F1, alpha subunit [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 514
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 226/403 (56%), Positives = 302/403 (74%), Gaps = 2/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + L +G CT ++ ++P+G LLGR+VN+ G+ +D K + + +EKI
Sbjct: 74 AVVLGEFSGLQEGDVVKCTGRVMQVPIGKALLGRVVNALGQPVDGKGAIDAEEFDVLEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR+SV+EP+ TGIKSID+M+PIG+GQRELIIGDRQTGKT +A+D I+NQK K+V
Sbjct: 134 APGVIDRQSVDEPMQTGIKSIDAMVPIGRGQRELIIGDRQTGKTAVAVDAILNQKGKDVQ 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S++ V+ KL+ Y M+YT V+AA A++SAA QY++PY GCT+GEYFRD
Sbjct: 194 CIYVAIGQKASTVAGVVRKLEEYGAMEYTTVIAANASESAAMQYLAPYAGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G + LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N F+EK
Sbjct: 254 GMNALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNADFVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA PIIET GDV++F+PTNVISITDGQI+L+T+LFN+ RPAIN GL
Sbjct: 314 TKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIYLETDLFNAGIRPAINAGL 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQYREL +F++F+SDLD +T+ Q+ G++++ L+K
Sbjct: 374 SVSRVGGAAQTKIIKKLGGGIRLDLAQYRELAAFAQFASDLDEITRKQIERGKRVTELLK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
Q S+ E L + + + + FE ++ Y
Sbjct: 434 QDQFSPMSVAEQGAALFAASSGALDDVEVANVRPFEKALLAYL 476
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 162/354 (45%), Gaps = 30/354 (8%)
Query: 576 NISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPI 635
+++N Q +G + G +G++ +V TG+ + P+G LGR++N LG P+
Sbjct: 62 GLAMNLEQDNVG-----AVVLGEFSGLQEGDVVKCTGRVMQVPIGKALLGRVVNALGQPV 116
Query: 636 DNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGK 695
D KG I++++ + + P ++ + ++TGIK ID + P +G + + G GK
Sbjct: 117 DGKGAIDAEEFDVLEKIAPGVIDRQSVDEPMQTGIKSIDAMVPIGRGQRELIIGDRQTGK 176
Query: 696 TVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGN 755
T ++ I N + C +++ +G+++ +++E ++ ++I +E +
Sbjct: 177 TAVAVDAILNQKGKDVQC-IYVAIGQKASTVAGVVRKLEEYGAMEYTTVIAANASESAAM 235
Query: 756 RLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEM 815
+ G ++ E FR+ G + L+ D++ + A ++S +L R P Y +
Sbjct: 236 QYLAPYAGCTMGEYFRDRGMNALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLH 295
Query: 816 GKLQERISST---------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIV 860
+L ER + K G++T++ I A D++ P+ + D I
Sbjct: 296 SRLLERAARVNADFVEKFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIY 355
Query: 861 LSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
L + GI PAI+ S S+ + G K+ + ++ L +Y+EL
Sbjct: 356 LETDLFNAGIRPAINAGLSVSR-----VGGAAQTKIIKKLGGGIRLDLAQYREL 404
>gi|146329630|ref|YP_001210028.1| ATP synthase F1 subunit alpha [Dichelobacter nodosus VCS1703A]
gi|190358171|sp|A5EXJ7.1|ATPA_DICNV RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|146233100|gb|ABQ14078.1| ATP synthase F1, alpha subunit [Dichelobacter nodosus VCS1703A]
Length = 513
Score = 491 bits (1263), Expect = e-135, Method: Compositional matrix adjust.
Identities = 237/405 (58%), Positives = 312/405 (77%), Gaps = 4/405 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ ++L +G K CT +I E+PVG LLGR+V++ G ID K K + VEKI
Sbjct: 73 AVVLGAYEHLREGDKVHCTGRILEVPVGRGLLGRVVDALGNPIDGKGKIDAEGSSPVEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG+++R+SV++PL TG+K+IDSM+P+G+GQRELIIGDRQTGKT IAID IINQKN VI
Sbjct: 133 APGVIERQSVDQPLQTGLKAIDSMVPLGRGQRELIIGDRQTGKTAIAIDAIINQKNTGVI 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ +V+ KL+ + + +T+VVAA+A+ SAA QYI+PY+GC +GE+FRD
Sbjct: 193 CIYVAIGQKASSIASVVRKLEEADALKHTIVVAASASTSAAMQYIAPYSGCAMGEFFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER+++IN +E+
Sbjct: 253 GEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARINAKEVERL 312
Query: 407 --KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVG 464
K+ K G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPAIN G
Sbjct: 313 TAGKVKGK-TGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAINAG 371
Query: 465 LSVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLM 524
LSVSRVGGAAQ +I+KKL G IR+ LAQYREL +F++F+SDLD T+ QL +G++++ LM
Sbjct: 372 LSVSRVGGAAQTQIIKKLGGGIRLALAQYRELAAFAQFASDLDEATRKQLEHGQRVTELM 431
Query: 525 KQKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
KQK + S+ E+ I L + + ++ I +E ++ + R
Sbjct: 432 KQKQYAPLSVAEMAISLFAADKGYLDTVAVEDIMAYETALLSFMR 476
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 157/339 (46%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G ++ V TG+ + PVG LGR+++ LG+PID KG+I+++ SP+
Sbjct: 71 VGAVVLGAYEHLREGDKVHCTGRILEVPVGRGLLGRVVDALGNPIDGKGKIDAEGSSPVE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TG+K ID + P +G + + G GKT ++ I N
Sbjct: 131 KIAPGVIERQSVDQPLQTGLKAIDSMVPLGRGQRELIIGDRQTGKTAIAIDAIINQKNTG 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ +++E++ L ++ + + + +G ++ E F
Sbjct: 191 VIC-IYVAIGQKASSIASVVRKLEEADALKHTIVVAASASTSAAMQYIAPYSGCAMGEFF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY-------QPTLAEEMGKLQ---- 819
R+ G+D L+ D++ + A +VS +L R P Y L E ++
Sbjct: 250 RDRGEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARINAKEV 309
Query: 820 ERISS----TKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
ER+++ K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 310 ERLTAGKVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHY----KVANEVKFYLQKYKEL 910
S S+ + G K+ ++ L +Y+EL
Sbjct: 370 AGLSVSR-----VGGAAQTQIIKKLGGGIRLALAQYREL 403
>gi|27364454|ref|NP_759982.1| ATP synthase F0F1 subunit beta [Vibrio vulnificus CMCP6]
gi|37681435|ref|NP_936044.1| F0F1 ATP synthase subunit beta [Vibrio vulnificus YJ016]
gi|320154858|ref|YP_004187237.1| ATP synthase subunit beta [Vibrio vulnificus MO6-24/O]
gi|81756325|sp|Q7MGI0.1|ATPB_VIBVY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|81844741|sp|Q8DDG8.1|ATPB_VIBVU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|27360573|gb|AAO09509.1| ATP synthase F1, beta subunit [Vibrio vulnificus CMCP6]
gi|37200187|dbj|BAC96015.1| F0F1-type ATP synthase, beta subunit [Vibrio vulnificus YJ016]
gi|319930170|gb|ADV85034.1| ATP synthase beta chain [Vibrio vulnificus MO6-24/O]
Length = 467
Score = 491 bits (1263), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/368 (63%), Positives = 293/368 (79%), Gaps = 9/368 (2%)
Query: 554 IKQIELFEINIIKYFRIINLKNNIS--INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDT 611
+ +E + ++ + +N+K++ + +VQQQ+G +VR I G+++G++R VV+T
Sbjct: 13 VVDVEFPQSDVPSVYDALNVKDSKERLVLEVQQQLGGGVVRCIVMGSSDGLRRGVEVVNT 72
Query: 612 GKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIK 671
G PI PVG TLGRI+NVLGD ID +GEI +++ IH P + Q +LETG+K
Sbjct: 73 GAPISVPVGTKTLGRIMNVLGDAIDERGEIGAEELYSIHRPAPSYEEQSNATELLETGVK 132
Query: 672 VIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYH 731
VIDL+CPF KGGKIGLFGGAGVGKTVNMMELI NIA++H G SVF GVGER+REGNDFYH
Sbjct: 133 VIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYH 192
Query: 732 EMKESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNI 784
EM+E+ V++ KV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLF+DNI
Sbjct: 193 EMQEAGVVNIEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNI 252
Query: 785 YRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLT 844
YR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPADDLT
Sbjct: 253 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKQGSITSVQAVYVPADDLT 312
Query: 845 DPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYL 904
DPSP+TTF HLD+T+VL+R IA +G+YPAIDPL+S S+QLDP +VG+EHY A V+ L
Sbjct: 313 DPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDTARGVQQTL 372
Query: 905 QKYKELKD 912
Q+YKELKD
Sbjct: 373 QRYKELKD 380
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 145/337 (43%), Gaps = 30/337 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG + LGRI+N G+ ID + + + ++ + AP ++
Sbjct: 62 GLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGEIGAEELYSIHRPAPSYEEQS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TG+K ID + P KG + + G GKT ++ I N + + ++ +G
Sbjct: 122 NATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
++ + ++++ ++ +V + + TG T+ E FRD
Sbjct: 182 ERTREGNDFYHEMQEAGVVNIEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDE 241
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D L+ D++ ++ A ++S LL R P V Y L E + ++
Sbjct: 242 GRDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QE 288
Query: 408 KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSV 467
+I + G++T+ + D+T P + D + L+ N+ PAI+ S
Sbjct: 289 RITSTKQGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDST 348
Query: 468 SR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESF 499
SR V G Y + ++ L +Y+EL+
Sbjct: 349 SRQLDPLVVGQEHYDTARG----VQQTLQRYKELKDI 381
>gi|398832324|ref|ZP_10590485.1| ATP synthase, F1 beta subunit [Herbaspirillum sp. YR522]
gi|398223421|gb|EJN09765.1| ATP synthase, F1 beta subunit [Herbaspirillum sp. YR522]
Length = 466
Score = 491 bits (1263), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/354 (64%), Positives = 284/354 (80%), Gaps = 7/354 (1%)
Query: 566 KYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLG 625
K + + L+ + +VQQQ+G+ +VRTIA G+++G++R + +TGK I PVG TLG
Sbjct: 25 KIYDALKLEGSDLTLEVQQQLGDGVVRTIALGSSDGLRRGLTITNTGKGITVPVGTATLG 84
Query: 626 RILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKI 685
RI++VLG+PID G ++ + + IH P + + +LETGIKVIDL+CPF KGGK+
Sbjct: 85 RIMDVLGNPIDECGPVSHAQTAQIHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKV 144
Query: 686 GLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD----- 740
GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM E+ V+D
Sbjct: 145 GLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMAEAKVVDLENPA 204
Query: 741 --KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAML 798
KV+++YGQMNEP GNRLRVALTGL+IAE FR+ GKDVL F+DNIYR+TLAGTEVSA+L
Sbjct: 205 NSKVAMVYGQMNEPPGNRLRVALTGLTIAEGFRDEGKDVLFFVDNIYRYTLAGTEVSALL 264
Query: 799 GRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDST 858
GR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST
Sbjct: 265 GRMPSAVGYQPTLAEEMGRLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDST 324
Query: 859 IVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY+ A V+ LQ+YKEL+D
Sbjct: 325 VVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGQEHYETARAVQGTLQRYKELRD 378
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 154/387 (39%), Gaps = 40/387 (10%)
Query: 132 RCLNQTLNIKFANNTV--------LSGQINGTTGYEEAAAQGFV-AVLIDDLKNLTQGQK 182
+C+ ++++F N + L G + T ++ G V + + L +G
Sbjct: 8 QCIGAVVDVEFPRNAMPKIYDALKLEGS-DLTLEVQQQLGDGVVRTIALGSSDGLRRGLT 66
Query: 183 CFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLL 242
T K +PVG LGRI++ G ID + + AP + E L
Sbjct: 67 ITNTGKGITVPVGTATLGRIMDVLGNPIDECGPVSHAQTAQIHRKAPAYDELSPSQELLE 126
Query: 243 TGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLI 301
TGIK ID + P KG + + G GKT ++ I N K + + ++ +G++
Sbjct: 127 TGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGN 186
Query: 302 NVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
+ +++ +D +V + + TG TI E FRD G+D L
Sbjct: 187 DFYHEMAEAKVVDLENPANSKVAMVYGQMNEPPGNRLRVALTGLTIAEGFRDEGKDVLFF 246
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P + + RL ER I +
Sbjct: 247 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKT 293
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 294 GSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQ 353
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y+ + + G L +Y+EL
Sbjct: 354 VVGQEHYETARAVQG----TLQRYKEL 376
>gi|407001296|gb|EKE18330.1| hypothetical protein ACD_10C00033G0003 [uncultured bacterium]
Length = 512
Score = 491 bits (1263), Expect = e-135, Method: Compositional matrix adjust.
Identities = 227/403 (56%), Positives = 307/403 (76%), Gaps = 2/403 (0%)
Query: 169 VLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIA 228
V++ + +++++G T +I E+PVG ELLGR+VNS G+ ID K K + +EK+A
Sbjct: 74 VILGEYEHISEGDIVKTTGRILEVPVGPELLGRVVNSLGQPIDGKGPVNAKLTDKIEKVA 133
Query: 229 PGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC 288
PG++ R+SV++P+ TG+K +D+M+P+G+GQRELIIGDRQTGKT +A+D IINQK KN+ C
Sbjct: 134 PGVIWRKSVSQPVQTGLKCVDAMVPVGRGQRELIIGDRQTGKTAVAVDAIINQKGKNLFC 193
Query: 289 IYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLG 348
+YV IGQK S++ NV+ KL+ M+YTVVVAATA++SAA QYI+PYTG T+GEYFRD G
Sbjct: 194 VYVAIGQKASTIANVVRKLEENGAMEYTVVVAATASESAALQYIAPYTGSTMGEYFRDSG 253
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK-- 406
QD LI+YDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER++++++ ++EK
Sbjct: 254 QDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVSEAWVEKVS 313
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
G+LTA P+IET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+S
Sbjct: 314 NGAIKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGIS 373
Query: 467 VSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMKQ 526
VSRVGGAAQ K++KKL G +R+ LAQYREL +F++F+SDLD T+ QL G ++ LMKQ
Sbjct: 374 VSRVGGAAQTKLIKKLGGGVRLALAQYRELAAFAQFASDLDEATRKQLERGRLVTELMKQ 433
Query: 527 KPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
+ SI E+ + L +F + +K+ E +I Y +
Sbjct: 434 AQYSPMSISEMAVTLYAADKGYFDDVEVKRALECEKAMIGYLK 476
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 159/339 (46%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I IV TG+ + PVG LGR++N LG PID KG +N+K I
Sbjct: 71 VGVVILGEYEHISEGDIVKTTGRILEVPVGPELLGRVVNSLGQPIDGKGPVNAKLTDKIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K +D + P +G + + G GKT ++ I N ++
Sbjct: 131 KVAPGVIWRKSVSQPVQTGLKCVDAMVPVGRGQRELIIGDRQTGKTAVAVDAIINQKGKN 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C V++ +G+++ + +++E+ ++ ++ +E + + TG ++ E F
Sbjct: 191 LFC-VYVAIGQKASTIANVVRKLEENGAMEYTVVVAATASESAALQYIAPYTGSTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY-------QPTLAEEMGKLQ---- 819
R+SG+D L+ D++ + A +VS +L R P Y L E ++
Sbjct: 250 RDSGQDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVSEAWV 309
Query: 820 ERISS----TKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
E++S+ K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 310 EKVSNGAIKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G K+ + V+ L +Y+EL
Sbjct: 370 AGISVSR-----VGGAAQTKLIKKLGGGVRLALAQYREL 403
>gi|255020239|ref|ZP_05292308.1| ATP synthase alpha chain [Acidithiobacillus caldus ATCC 51756]
gi|340780775|ref|YP_004747382.1| ATP synthase subunit alpha [Acidithiobacillus caldus SM-1]
gi|254970381|gb|EET27874.1| ATP synthase alpha chain [Acidithiobacillus caldus ATCC 51756]
gi|340554928|gb|AEK56682.1| ATP synthase alpha chain [Acidithiobacillus caldus SM-1]
Length = 514
Score = 491 bits (1263), Expect = e-135, Method: Compositional matrix adjust.
Identities = 224/403 (55%), Positives = 304/403 (75%), Gaps = 2/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + L +G CT K+ ++P+G LLGR+VN+ G+ +D K + + +EKI
Sbjct: 74 AVVLGEFSGLEEGDVVKCTGKVMQVPIGKALLGRVVNTLGQPVDGKGPVDTQEFDILEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG+++R+SV+ P+ TGIK+ID+M+P+G+GQRELIIGDRQTGKT +A+D IINQK K+V
Sbjct: 134 APGVVERQSVDVPMQTGIKAIDAMVPVGRGQRELIIGDRQTGKTAVAVDAIINQKGKDVY 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK S++ V+ KL+ Y M+YT VVAA A++SAA QY++PY GCT+GEYFRD
Sbjct: 194 CIYVAVGQKASTVAAVVRKLEEYGAMEYTTVVAANASESAAMQYLAPYAGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++E
Sbjct: 254 GMDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNADYVESF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA PIIET GDV++F+PTNVISITDGQI+L+++LFNS RPAIN GL
Sbjct: 314 TKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIYLESDLFNSGIRPAINAGL 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G+IR+ LAQYREL +F++F+SDLD +T+ Q+ G++++ L+K
Sbjct: 374 SVSRVGGAAQTKIIKKLGGNIRLDLAQYRELAAFAQFASDLDEITRKQIERGKRVTELLK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
Q + S+ E + L + + + ++ FE ++ Y
Sbjct: 434 QDQYAPMSVAEQAVSLFTASSGALDDVEVNKVRPFEKALLSYL 476
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 161/356 (45%), Gaps = 30/356 (8%)
Query: 574 KNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGD 633
K +++N Q +G + G +G++ +V TGK + P+G LGR++N LG
Sbjct: 60 KYALALNLEQDNVG-----AVVLGEFSGLEEGDVVKCTGKVMQVPIGKALLGRVVNTLGQ 114
Query: 634 PIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGV 693
P+D KG +++++ + + P + + ++TGIK ID + P +G + + G
Sbjct: 115 PVDGKGPVDTQEFDILEKIAPGVVERQSVDVPMQTGIKAIDAMVPVGRGQRELIIGDRQT 174
Query: 694 GKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPS 753
GKT ++ I N + C +++ VG+++ +++E ++ +++ +E +
Sbjct: 175 GKTAVAVDAIINQKGKDVYC-IYVAVGQKASTVAAVVRKLEEYGAMEYTTVVAANASESA 233
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
+ G ++ E FR+ G D L+ D++ + A ++S +L R P Y +
Sbjct: 234 AMQYLAPYAGCTMGEYFRDRGMDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFY 293
Query: 814 EMGKLQERISST---------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDST 858
+L ER S K G++T++ I A D++ P+ + D
Sbjct: 294 LHSRLLERASRVNADYVESFTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQ 353
Query: 859 IVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
I L + GI PAI+ S S+ + G K+ ++ L +Y+EL
Sbjct: 354 IYLESDLFNSGIRPAINAGLSVSR-----VGGAAQTKIIKKLGGNIRLDLAQYREL 404
>gi|422911577|ref|ZP_16946195.1| ATP synthase F1, beta subunit [Vibrio cholerae HE-09]
gi|341631269|gb|EGS56175.1| ATP synthase F1, beta subunit [Vibrio cholerae HE-09]
Length = 467
Score = 491 bits (1263), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/339 (67%), Positives = 279/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G ++R I G+++G++R V +TG PI PVG TLGRI+NVLGD ID +G+
Sbjct: 42 EVQQQLGGGVIRAIVMGSSDGLRRGMTVQNTGSPISVPVGTKTLGRIMNVLGDAIDERGD 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q +LETG+KVIDL+CPF KGGKIGLFGGAGVGKTVNMM
Sbjct: 102 IGAEEVYSIHRPAPSYEEQSSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV-------LDKVSLIYGQMNEPS 753
ELI NIA++H G SVF GVGER+REGNDFYHEM+E+ V L KV+++YGQMNEP
Sbjct: 162 ELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNVEQPELSKVAMVYGQMNEPP 221
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 222 GNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 281
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VL+R IA +G+YPA
Sbjct: 282 EMGVLQERITSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPA 341
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IDPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 342 IDPLDSTSRQLDPLVVGQEHYDVARGVQATLQRYKELKD 380
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 157/377 (41%), Gaps = 32/377 (8%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+++ L +G T +PVG + LGRI+N G+ ID + + ++ +
Sbjct: 54 AIVMGSSDGLRRGMTVQNTGSPISVPVGTKTLGRIMNVLGDAIDERGDIGAEEVYSIHRP 113
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP ++ S E L TG+K ID + P KG + + G GKT ++ I N +
Sbjct: 114 APSYEEQSSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSG 173
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCT 339
+ ++ +G++ + ++++ ++ +V + + TG T
Sbjct: 174 LSVFAGVGERTREGNDFYHEMQEAGVVNVEQPELSKVAMVYGQMNEPPGNRLRVALTGLT 233
Query: 340 IGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKI 399
+ E FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 234 MAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL 286
Query: 400 NKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRP 459
+++I + G++T+ + D+T P + D + L+ N+ P
Sbjct: 287 ------QERITSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYP 340
Query: 460 AINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKT 512
AI+ S SR V G Y + + ++ L +Y+EL+ +L K
Sbjct: 341 AIDPLDSTSRQLDPLVVGQEHYDVARG----VQATLQRYKELKDIIAILGMDELSEADKQ 396
Query: 513 QLYNGEKISLLMKQKPH 529
+ KI + Q H
Sbjct: 397 VVARARKIERFLTQPYH 413
>gi|74318817|ref|YP_316557.1| ATP synthase F0F1 subunit alpha [Thiobacillus denitrificans ATCC
25259]
gi|124007224|sp|Q3SF64.1|ATPA_THIDA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|74058312|gb|AAZ98752.1| F-type H+-transporting ATP synthase, alpha subunit [Thiobacillus
denitrificans ATCC 25259]
Length = 513
Score = 491 bits (1263), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/404 (56%), Positives = 311/404 (76%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++ +G CT +I E+PVG LLGR+VNS G+ ID K + +E+I
Sbjct: 73 AVILGDYEHIKEGDVAKCTGRILEVPVGRGLLGRVVNSLGQPIDGKGPIAADSSMPIERI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG+++R+SV++P+ TG+KSID+M+P+G+GQRELIIGDRQTGKT +AID IINQK V
Sbjct: 133 APGVIERKSVDQPVQTGLKSIDAMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK SS+ NV+ KL+ + M++T+VVAATA+D+AA QYI+PY+GCT+GEYFRD+
Sbjct: 193 CIYVAVGQKASSVANVVRKLEEHGAMEHTIVVAATASDAAAMQYIAPYSGCTMGEYFRDI 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 253 GEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEKL 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN GL
Sbjct: 313 TGGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGL 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K+VKKL G +R+ LAQYREL +F++F+SDLD T+ QL G +++ LMK
Sbjct: 373 SVSRVGGAAQTKVVKKLGGGVRLALAQYRELAAFAQFASDLDEATRKQLERGRRVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q + S+ ++ + L + N + ++ + +I FE + + +
Sbjct: 433 QAQYSPMSVSQMALTLFAVNNGYMDEVEVNKILAFEAALQAFMK 476
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 153/342 (44%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ IK + TG+ + PVG LGR++N LG PID KG I + PI
Sbjct: 71 VGAVILGDYEHIKEGDVAKCTGRILEVPVGRGLLGRVVNSLGQPIDGKGPIAADSSMPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GKT ++ I I
Sbjct: 131 RIAPGVIERKSVDQPVQTGLKSIDAMVPVGRGQRELIIGDRQTGKTAVAIDAI----INQ 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ VG+++ + +++E ++ ++ ++ + + +G ++
Sbjct: 187 KGTGVKCIYVAVGQKASSVANVVRKLEEHGAMEHTIVVAATASDAAAMQYIAPYSGCTMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A +VS +L R P Y + +L ER +
Sbjct: 247 EYFRDIGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNA 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + GI P
Sbjct: 307 DYVEKLTGGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
AI+ S S+ + G KV + V+ L +Y+EL
Sbjct: 367 AINAGLSVSR-----VGGAAQTKVVKKLGGGVRLALAQYREL 403
>gi|289209748|ref|YP_003461814.1| ATP synthase F1 subunit alpha [Thioalkalivibrio sp. K90mix]
gi|288945379|gb|ADC73078.1| ATP synthase F1, alpha subunit [Thioalkalivibrio sp. K90mix]
Length = 513
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/403 (57%), Positives = 302/403 (74%), Gaps = 2/403 (0%)
Query: 169 VLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIA 228
V++ D K++ +G CT +I E+PVG LLGR+V+S G ID K +EKIA
Sbjct: 74 VILGDYKHIKEGDTAKCTGRILEVPVGEGLLGRVVDSLGRPIDGKGPVDTGVTSPIEKIA 133
Query: 229 PGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC 288
PG++DR+SV++PL +GIK+ID+M+P+G+GQRELIIGDRQTGKT +AID IINQK+ V C
Sbjct: 134 PGVIDRQSVDQPLQSGIKAIDAMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKDSGVKC 193
Query: 289 IYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLG 348
IYV +GQK SS+ +V+ KL+ M+ T++VAA A++SAA Q+I+PY GC +GEYFRD G
Sbjct: 194 IYVAVGQKASSVASVVAKLEEAGAMENTIIVAANASESAAMQFIAPYAGCAMGEYFRDRG 253
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK-- 406
+D LI+YDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++E+
Sbjct: 254 EDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERASRVNADYVEQLT 313
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPAIN GLS
Sbjct: 314 NGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAINAGLS 373
Query: 467 VSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMKQ 526
VSRVGGAAQ KI+KKL G +R+ LAQYREL +FS+F+SDLD +T+ QL G++++ LMKQ
Sbjct: 374 VSRVGGAAQTKIIKKLGGGVRLALAQYRELAAFSQFASDLDELTRKQLDRGKRVTELMKQ 433
Query: 527 KPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
++ SI E+ L + + ++ FE +I Y R
Sbjct: 434 GQYQPMSIGEMAFSLYAANEGYLDDVEADKVVSFEKELIAYAR 476
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 154/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ IK TG+ + PVG+ LGR+++ LG PID KG +++ SPI
Sbjct: 71 VGVVILGDYKHIKEGDTAKCTGRILEVPVGEGLLGRVVDSLGRPIDGKGPVDTGVTSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P ++ + L++GIK ID + P +G + + G GKT ++ I N
Sbjct: 131 KIAPGVIDRQSVDQPLQSGIKAIDAMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKDSG 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ VG+++ +++E+ ++ ++ +E + + G ++ E F
Sbjct: 191 VKC-IYVAVGQKASSVASVVAKLEEAGAMENTIIVAANASESAAMQFIAPYAGCAMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A +VS +L R P Y + +L ER S
Sbjct: 250 RDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERASRVNADYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
+ G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 310 EQLTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G K+ + V+ L +Y+EL
Sbjct: 370 AGLSVSR-----VGGAAQTKIIKKLGGGVRLALAQYREL 403
>gi|71066578|ref|YP_265305.1| ATP synthase F0F1 subunit beta [Psychrobacter arcticus 273-4]
gi|118573726|sp|Q4FQ37.1|ATPB_PSYA2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|71039563|gb|AAZ19871.1| ATP synthase F1 subcomplex beta subunit [Psychrobacter arcticus
273-4]
Length = 477
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/346 (67%), Positives = 285/346 (82%), Gaps = 14/346 (4%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G+T G+KRN V +TG PI PVG TLGRI++VLG PID +G
Sbjct: 40 EVQQQLGDGIVRTIAMGSTEGLKRNLSVTNTGGPISVPVGVGTLGRIMDVLGRPIDEEGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
+ + ++ IH P ++ Q + +LETGIKVIDLLCPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 VEADERWSIHREAPSYAEQSNSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA++H+G SVF GVGER+REGNDFYHEM+E+ V++ KV+++YGQMNEP
Sbjct: 160 ELINNIALKHEGLSVFAGVGERTREGNDFYHEMQEAGVVNTEDFSKSKVAMVYGQMNEPP 219
Query: 754 GNRLRVALTGLSIAEEFRNS-------GKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVG 806
GNRLRVAL+GL++AE FR++ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVG
Sbjct: 220 GNRLRVALSGLTMAEYFRDTKDPATGKGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVG 279
Query: 807 YQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIA 866
YQPTLAEEMG LQERI+ST++G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA
Sbjct: 280 YQPTLAEEMGMLQERITSTQSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIA 339
Query: 867 ELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
GIYPA+DPL+S S+QLDP ++GEEHY VA V+ LQ+YKELKD
Sbjct: 340 SQGIYPAVDPLDSTSRQLDPLVIGEEHYNVARGVQEVLQRYKELKD 385
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 179/428 (41%), Gaps = 47/428 (10%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+ + L+++F N V + Q++GT E Q G V + + + L +
Sbjct: 8 QIIGAVLDVEFNRNEVPRIYDALQVDGTETTLEVQQQLGDGIVRTIAMGSTEGLKRNLSV 67
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T +PVG LGRI++ G ID + R ++ + AP ++ + E L T
Sbjct: 68 TNTGGPISVPVGVGTLGRIMDVLGRPIDEEGPVEADERWSIHREAPSYAEQSNSTELLET 127
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCIGQKI---SS 299
GIK ID + P KG + + G GKT ++ I N K+ + ++ +G++ +
Sbjct: 128 GIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIALKHEGLSVFAGVGERTREGND 187
Query: 300 LINVINKLKYYNCMDYT----VVVAATAADSAAEQYISPYTGCTIGEYFRDL-------G 348
+ + + N D++ +V + + +G T+ EYFRD G
Sbjct: 188 FYHEMQEAGVVNTEDFSKSKVAMVYGQMNEPPGNRLRVALSGLTMAEYFRDTKDPATGKG 247
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L+ D++ ++ A ++S LL R P V Y + + + + +++
Sbjct: 248 RDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGMLQER 294
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + +G++T+ + D+T P + D + L ++ + PA++ S S
Sbjct: 295 ITSTQSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDSTS 354
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKIS 521
R V G Y + + ++ +L +Y+EL+ +L K +Y KI
Sbjct: 355 RQLDPLVIGEEHYNVARG----VQEVLQRYKELKDIIAILGMDELSEEDKLVVYRARKIQ 410
Query: 522 LLMKQKPH 529
+ Q H
Sbjct: 411 RFLSQPFH 418
>gi|372267005|ref|ZP_09503053.1| F0F1 ATP synthase subunit alpha [Alteromonas sp. S89]
Length = 514
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/403 (58%), Positives = 308/403 (76%), Gaps = 2/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+++ D K+L +GQKC CT +I E PVG ELLGR+V++ G ID K K + VEK+
Sbjct: 74 AIVLGDYKSLAEGQKCRCTGRILEAPVGPELLGRVVDALGNPIDGKGPLNNKLTDAVEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+K++D+MIPIG+GQRELIIGDRQ GKT +AID IINQK +
Sbjct: 134 APGVIARQSVDQPVQTGLKAVDTMIPIGRGQRELIIGDRQIGKTAVAIDAIINQKGTGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK SS+ NV+ KL+ + MD+T+VVAA AAD AA Q+++PY GCT+GEYFRD
Sbjct: 194 CIYVAVGQKQSSIANVVRKLEEHGAMDHTIVVAAGAADPAAMQFLAPYVGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTK AWAYRQISLLL+RPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 254 GEDALIIYDDLTKQAWAYRQISLLLKRPPGREAYPGDVFYLHSRLLERAARVNAEYVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPAIN G+
Sbjct: 314 TNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGVRPAINPGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGG+AQ K++KKLSG IR LAQYREL +FS+F+SDLD TK QL +GE+++ LMK
Sbjct: 374 SVSRVGGSAQTKVIKKLSGGIRTALAQYRELAAFSQFASDLDEATKAQLDHGERVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
QK + SI ++ + + F + + ++ FE ++ Y
Sbjct: 434 QKQYSPMSIADMAVSVYAADKGFLNDVEVNKVLDFESALLAYM 476
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 153/342 (44%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V I G+ + TG+ + PVG LGR+++ LG+PID KG +N+K +
Sbjct: 72 VGAIVLGDYKSLAEGQKCRCTGRILEAPVGPELLGRVVDALGNPIDGKGPLNNKLTDAVE 131
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K +D + P +G + + G +GKT ++ I I
Sbjct: 132 KVAPGVIARQSVDQPVQTGLKAVDTMIPIGRGQRELIIGDRQIGKTAVAIDAI----INQ 187
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG + ++ VG++ + +++E +D ++ +P+ + G ++
Sbjct: 188 KGTGIKCIYVAVGQKQSSIANVVRKLEEHGAMDHTIVVAAGAADPAAMQFLAPYVGCTMG 247
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 248 EYFRDRGEDALIIYDDLTKQAWAYRQISLLLKRPPGREAYPGDVFYLHSRLLERAARVNA 307
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + G+ P
Sbjct: 308 EYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGVRP 367
Query: 873 AIDPLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
AI+P S S+ + G KV + ++ L +Y+EL
Sbjct: 368 AINPGISVSR-----VGGSAQTKVIKKLSGGIRTALAQYREL 404
>gi|261213283|ref|ZP_05927565.1| ATP synthase beta chain [Vibrio sp. RC341]
gi|262190641|ref|ZP_06048876.1| ATP synthase beta chain [Vibrio cholerae CT 5369-93]
gi|262402102|ref|ZP_06078666.1| ATP synthase beta chain [Vibrio sp. RC586]
gi|260837557|gb|EEX64260.1| ATP synthase beta chain [Vibrio sp. RC341]
gi|262033479|gb|EEY51982.1| ATP synthase beta chain [Vibrio cholerae CT 5369-93]
gi|262351748|gb|EEZ00880.1| ATP synthase beta chain [Vibrio sp. RC586]
Length = 467
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/339 (67%), Positives = 278/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G ++R I G+++G++R V +TG PI PVG TLGRI+NVLGD ID +G+
Sbjct: 42 EVQQQLGGGVIRAIVMGSSDGLRRGMTVQNTGAPISVPVGTKTLGRIMNVLGDAIDERGD 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q +LETG+KVIDL+CPF KGGKIGLFGGAGVGKTVNMM
Sbjct: 102 IGAEEVYSIHRPAPSYEEQSSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV-------LDKVSLIYGQMNEPS 753
ELI NIA++H G SVF GVGER+REGNDFYHEM+E+ V L KV+++YGQMNEP
Sbjct: 162 ELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNVEQPELSKVAMVYGQMNEPP 221
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 222 GNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 281
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VL+R IA +G+YPA
Sbjct: 282 EMGVLQERITSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPA 341
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IDPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 342 IDPLDSTSRQLDPLVVGQEHYDVARGVQATLQRYKELKD 380
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 157/377 (41%), Gaps = 32/377 (8%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+++ L +G T +PVG + LGRI+N G+ ID + + ++ +
Sbjct: 54 AIVMGSSDGLRRGMTVQNTGAPISVPVGTKTLGRIMNVLGDAIDERGDIGAEEVYSIHRP 113
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP ++ S E L TG+K ID + P KG + + G GKT ++ I N +
Sbjct: 114 APSYEEQSSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSG 173
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCT 339
+ ++ +G++ + ++++ ++ +V + + TG T
Sbjct: 174 LSVFAGVGERTREGNDFYHEMQEAGVVNVEQPELSKVAMVYGQMNEPPGNRLRVALTGLT 233
Query: 340 IGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKI 399
+ E FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 234 MAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL 286
Query: 400 NKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRP 459
+++I + G++T+ + D+T P + D + L+ N+ P
Sbjct: 287 ------QERITSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYP 340
Query: 460 AINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKT 512
AI+ S SR V G Y + + ++ L +Y+EL+ +L K
Sbjct: 341 AIDPLDSTSRQLDPLVVGQEHYDVARG----VQATLQRYKELKDIIAILGMDELSEADKQ 396
Query: 513 QLYNGEKISLLMKQKPH 529
+ KI + Q H
Sbjct: 397 VVARARKIERFLTQPYH 413
>gi|121999210|ref|YP_001003997.1| F0F1 ATP synthase subunit alpha [Halorhodospira halophila SL1]
gi|158514023|sp|A1WZT3.1|ATPA_HALHL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|121590615|gb|ABM63195.1| ATP synthase F1 subcomplex alpha subunit [Halorhodospira halophila
SL1]
Length = 513
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/404 (56%), Positives = 300/404 (74%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AVL+ D +++ +G CT +I E+PVG +LGR+V++ G D K + E +EK+
Sbjct: 73 AVLLGDYQHIKEGATVKCTGRILEVPVGDAMLGRVVDALGRPTDGKGPIKTEGSEPIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ RE V++P+ TG+K+IDSM+PIG+GQRELIIGDRQTGKT +A+D IINQK+ +
Sbjct: 133 APGVITREGVDQPVQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKDSGIK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK S++ NV+ KL+ + MD T+VV A A++SAA QYI+PY GC +GEYFRD
Sbjct: 193 CIYVAVGQKNSTVANVVRKLEEHGAMDNTIVVNAGASESAAMQYIAPYAGCAMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
GQD LIIYDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER+S+IN +E++
Sbjct: 253 GQDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERASRINAEEVERR 312
Query: 408 K--IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQI+L+T+LFNS RPA+N GL
Sbjct: 313 TNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIYLETDLFNSGVRPAVNAGL 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGG+AQ KI+KKL G +R+ LAQYREL +FS+F+SDLD T+ QL G++ LMK
Sbjct: 373 SVSRVGGSAQTKIIKKLGGGVRLALAQYRELAAFSQFASDLDETTRQQLERGKRTMELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q +E S+ E+ +L + + Q+ FE ++ Y R
Sbjct: 433 QGQYEPQSVGEMAFVLFAANEGYVDDVENDQVVRFEKALLDYLR 476
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 152/339 (44%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ IK V TG+ + PVGD LGR+++ LG P D KG I ++ PI
Sbjct: 71 VGAVLLGDYQHIKEGATVKCTGRILEVPVGDAMLGRVVDALGRPTDGKGPIKTEGSEPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GKT ++ I N
Sbjct: 131 KVAPGVITREGVDQPVQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKDSG 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ VG+++ + +++E +D ++ +E + + G ++ E F
Sbjct: 191 IKC-IYVAVGQKNSTVANVVRKLEEHGAMDNTIVVNAGASESAAMQYIAPYAGCAMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERIS------- 823
R+ G+D L+ D++ + A +VS +L R P Y + +L ER S
Sbjct: 250 RDRGQDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERASRINAEEV 309
Query: 824 --------STKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
+ G++T++ I A D++ P+ + D I L + G+ PA++
Sbjct: 310 ERRTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIYLETDLFNSGVRPAVN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G K+ + V+ L +Y+EL
Sbjct: 370 AGLSVSR-----VGGSAQTKIIKKLGGGVRLALAQYREL 403
>gi|424657880|ref|ZP_18095154.1| ATP synthase F1, beta subunit [Vibrio cholerae HE-16]
gi|408057308|gb|EKG92160.1| ATP synthase F1, beta subunit [Vibrio cholerae HE-16]
Length = 467
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/339 (67%), Positives = 279/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G ++R I G+++G++R V +TG PI PVG TLGRI+NVLGD ID +G+
Sbjct: 42 EVQQQLGGGVIRAIVMGSSDGLRRGMTVQNTGSPISVPVGTKTLGRIMNVLGDAIDERGD 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q +LETG+KVIDL+CPF KGGKIGLFGGAGVGKTVNMM
Sbjct: 102 IGAEEVYSIHRPAPSYEEQSSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV-------LDKVSLIYGQMNEPS 753
ELI NIA++H G SVF GVGER+REGNDFYHEM+E+ V L KV+++YGQMNEP
Sbjct: 162 ELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNVEQPELSKVAMVYGQMNEPP 221
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 222 GNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 281
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VL+R IA +G+YPA
Sbjct: 282 EMGVLQERITSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPA 341
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IDPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 342 IDPLDSTSRQLDPLVVGQEHYDVARGVQATLQRYKELKD 380
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 157/377 (41%), Gaps = 32/377 (8%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+++ L +G T +PVG + LGRI+N G+ ID + + ++ +
Sbjct: 54 AIVMGSSDGLRRGMTVQNTGSPISVPVGTKTLGRIMNVLGDAIDERGDIGAEEVYSIHRP 113
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP ++ S E L TG+K ID + P KG + + G GKT ++ I N +
Sbjct: 114 APSYEEQSSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSG 173
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCT 339
+ ++ +G++ + ++++ ++ +V + + TG T
Sbjct: 174 LSVFAGVGERTREGNDFYHEMQEAGVVNVEQPELSKVAMVYGQMNEPPGNRLRVALTGLT 233
Query: 340 IGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKI 399
+ E FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 234 MAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL 286
Query: 400 NKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRP 459
+++I + G++T+ + D+T P + D + L+ N+ P
Sbjct: 287 ------QERITSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYP 340
Query: 460 AINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKT 512
AI+ S SR V G Y + + ++ L +Y+EL+ +L K
Sbjct: 341 AIDPLDSTSRQLDPLVVGQEHYDVARG----VQATLQRYKELKDIIAILGMDELSEADKQ 396
Query: 513 QLYNGEKISLLMKQKPH 529
+ KI + Q H
Sbjct: 397 VVARARKIERFLTQPYH 413
>gi|344201254|ref|YP_004785580.1| ATP synthase subunit alpha [Acidithiobacillus ferrivorans SS3]
gi|343776698|gb|AEM49254.1| ATP synthase subunit alpha [Acidithiobacillus ferrivorans SS3]
Length = 514
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 223/403 (55%), Positives = 303/403 (75%), Gaps = 2/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + L +G CT ++ ++P+G LLGR+VN+ G+ ID K + + +EKI
Sbjct: 74 AVVLGEFSGLEEGGVVKCTGRVMQVPIGKALLGRVVNALGQPIDGKGPVETEEYDVLEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG+++R+SV+EP+ TGIK+ID+M+PIG+GQRELIIGDRQTGKT +A+D IINQK K+V
Sbjct: 134 APGVVERQSVDEPMQTGIKAIDAMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGKDVQ 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK S++ V+ KL+ + M+YT V+AA A++SAA QY++PY GCT+GEYFRD
Sbjct: 194 CIYVAVGQKASTVAGVVRKLEEHGAMEYTTVIAANASESAAMQYLAPYAGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G + LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N F+EK
Sbjct: 254 GMNALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNTDFVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQI+L+T+LFNS RPAIN GL
Sbjct: 314 TNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIYLETDLFNSGIRPAINAGL 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKL G IR+ LAQYREL +F++F+SDLD +T+ Q+ G++++ L+K
Sbjct: 374 SVSRVGGAAQTKVIKKLGGGIRLDLAQYRELAAFAQFASDLDEITRKQIERGKRVTELLK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
Q S+ E ++L + + + + FE ++ Y
Sbjct: 434 QDQFSPMSVAEQSVVLFAASSGALDDVEVAHVRPFEKALLAYL 476
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 160/353 (45%), Gaps = 30/353 (8%)
Query: 577 ISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPID 636
+++N Q +G + G +G++ +V TG+ + P+G LGR++N LG PID
Sbjct: 63 LAMNLEQDNVG-----AVVLGEFSGLEEGGVVKCTGRVMQVPIGKALLGRVVNALGQPID 117
Query: 637 NKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKT 696
KG + +++ + + P + + ++TGIK ID + P +G + + G GKT
Sbjct: 118 GKGPVETEEYDVLEKIAPGVVERQSVDEPMQTGIKAIDAMVPIGRGQRELIIGDRQTGKT 177
Query: 697 VNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNR 756
++ I N + C +++ VG+++ +++E ++ ++I +E + +
Sbjct: 178 AVAVDAIINQKGKDVQC-IYVAVGQKASTVAGVVRKLEEHGAMEYTTVIAANASESAAMQ 236
Query: 757 LRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMG 816
G ++ E FR+ G + L+ D++ + A ++S +L R P Y +
Sbjct: 237 YLAPYAGCTMGEYFRDRGMNALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 296
Query: 817 KLQERISST---------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVL 861
+L ER + K G++T++ I A D++ P+ + D I L
Sbjct: 297 RLLERAARVNTDFVEKFTNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIYL 356
Query: 862 SRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
+ GI PAI+ S S+ + G KV + ++ L +Y+EL
Sbjct: 357 ETDLFNSGIRPAINAGLSVSR-----VGGAAQTKVIKKLGGGIRLDLAQYREL 404
>gi|93007151|ref|YP_581588.1| F0F1 ATP synthase subunit beta [Psychrobacter cryohalolentis K5]
gi|118573727|sp|Q1Q899.1|ATPB_PSYCK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|92394829|gb|ABE76104.1| ATP synthase F1 subcomplex beta subunit [Psychrobacter
cryohalolentis K5]
Length = 477
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/370 (63%), Positives = 293/370 (79%), Gaps = 14/370 (3%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + K F + + + +VQQQ+G+ IVRTIA G+T G+KRN V +TG PI
Sbjct: 16 VEFNRNEVPKIFDALLVDGTETTLEVQQQLGDGIVRTIAMGSTEGLKRNLPVTNTGGPIS 75
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID +G + + ++ IH P ++ Q + +LETGIKVIDLL
Sbjct: 76 VPVGIGTLGRIMDVLGRPIDEEGPVQADERWSIHREAPSYAEQSNSTELLETGIKVIDLL 135
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA++H+G SVF GVGER+REGNDFYHEM+E+
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIALKHEGLSVFAGVGERTREGNDFYHEMQEA 195
Query: 737 NVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNS-------GKDVLLFID 782
V++ KV+++YGQMNEP GNRLRVAL+GL++AE FR++ G+DVLLF+D
Sbjct: 196 GVVNTEDFSKSKVAMVYGQMNEPPGNRLRVALSGLTMAEYFRDTKDPATGKGRDVLLFVD 255
Query: 783 NIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADD 842
NIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+ST++G+ITSVQA+YVPADD
Sbjct: 256 NIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGMLQERITSTQSGSITSVQAVYVPADD 315
Query: 843 LTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKF 902
LTDPSP+TTF HLD+T+VLSR IA GIYPA+DPL+S S+QLDP ++GEEHY VA V+
Sbjct: 316 LTDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDSTSRQLDPLVIGEEHYNVARGVQE 375
Query: 903 YLQKYKELKD 912
LQ+YKELKD
Sbjct: 376 VLQRYKELKD 385
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 154/360 (42%), Gaps = 39/360 (10%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + R ++ + AP ++ + E L TGIK ID +
Sbjct: 76 VPVGIGTLGRIMDVLGRPIDEEGPVQADERWSIHREAPSYAEQSNSTELLETGIKVIDLL 135
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCIGQKI---SSLINVINKL 307
P KG + + G GKT ++ I N K+ + ++ +G++ + + + +
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIALKHEGLSVFAGVGERTREGNDFYHEMQEA 195
Query: 308 KYYNCMDYT----VVVAATAADSAAEQYISPYTGCTIGEYFRDL-------GQDCLIIYD 356
N D++ +V + + +G T+ EYFRD G+D L+ D
Sbjct: 196 GVVNTEDFSKSKVAMVYGQMNEPPGNRLRVALSGLTMAEYFRDTKDPATGKGRDVLLFVD 255
Query: 357 DLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGT 416
++ ++ A ++S LL R P V Y + + + + +++I + +G+
Sbjct: 256 NIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGMLQERITSTQSGS 302
Query: 417 LTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VG 471
+T+ + D+T P + D + L ++ + PA++ S SR V
Sbjct: 303 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDSTSRQLDPLVI 362
Query: 472 GAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKISLLMKQKPH 529
G Y + + ++ +L +Y+EL+ +L K +Y KI + Q H
Sbjct: 363 GEEHYNVARG----VQEVLQRYKELKDIIAILGMDELSEEDKLVVYRARKIQRFLSQPFH 418
>gi|417386882|ref|ZP_12151461.1| ATP synthase subunit B [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353602023|gb|EHC57498.1| ATP synthase subunit B [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
Length = 404
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 227/317 (71%), Positives = 269/317 (84%)
Query: 596 FGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPK 655
G+++G++R V D PI PVG TLGRI+NVLG+P+D KGEI +++ IH P
Sbjct: 1 MGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPS 60
Query: 656 FSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSV 715
+ + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SV
Sbjct: 61 YEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSV 120
Query: 716 FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGK 775
F GVGER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+
Sbjct: 121 FAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 180
Query: 776 DVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQA 835
DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA
Sbjct: 181 DVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQA 240
Query: 836 IYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYK 895
+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY
Sbjct: 241 VYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYD 300
Query: 896 VANEVKFYLQKYKELKD 912
A V+ LQ+Y+ELKD
Sbjct: 301 TARGVQSILQRYQELKD 317
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 6 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 65
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 66 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 125
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 126 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 185
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y + + + + +++I +
Sbjct: 186 VDNIYRYTLAGTEVSALLGR------MPSAVGY-------QPTLAEEMGVLQERITSTKT 232
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 233 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 292
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 293 VVGQEHYDTARG----VQSILQRYQELK 316
>gi|121607476|ref|YP_995283.1| F0F1 ATP synthase subunit beta [Verminephrobacter eiseniae EF01-2]
gi|190358710|sp|A1WF58.1|ATPB_VEREI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|121552116|gb|ABM56265.1| ATP synthase F1, beta subunit [Verminephrobacter eiseniae EF01-2]
Length = 471
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/366 (62%), Positives = 287/366 (78%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + K + + + + +VQQQ+G+ +VRTIA G+++G++R IV +T
Sbjct: 18 VVDVEFPRDKMPKIYDALKFEGSALTLEVQQQLGDGVVRTIALGSSDGLRRGLIVTNTQA 77
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG PID +G ++ + IH P + + ++LETGIKVI
Sbjct: 78 PITVPVGKATLGRIMDVLGAPIDERGPVDQTLTASIHRKAPAYDELSPSQDLLETGIKVI 137
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 138 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 197
Query: 734 KESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
+S V++ KV+++YGQMNEP GNRLRVALTGL+IAE FR+ G+DVL F+DNIYR
Sbjct: 198 ADSGVVNLEKLENSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYR 257
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 258 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDP 317
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLDST+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY VA V+ LQ+
Sbjct: 318 SPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGQEHYNVARAVQGTLQR 377
Query: 907 YKELKD 912
YKEL+D
Sbjct: 378 YKELRD 383
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 136/336 (40%), Gaps = 34/336 (10%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T+ +PVG LGRI++ G ID + ++ + AP +
Sbjct: 65 GLRRGLIVTNTQAPITVPVGKATLGRIMDVLGAPIDERGPVDQTLTASIHRKAPAYDELS 124
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 125 PSQDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 184
Query: 295 QKIS---------SLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFR 345
++ + V+N K N +V + + TG TI E FR
Sbjct: 185 ERTREGNDFYHEMADSGVVNLEKLENSK--VAMVYGQMNEPPGNRLRVALTGLTIAESFR 242
Query: 346 DLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLE 405
D G+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 243 DEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER---------- 292
Query: 406 KKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
I + G++T+ + D+T P + D + L ++ + PA++
Sbjct: 293 ---ITSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLD 349
Query: 466 SVSR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
S SR V G Y + + + G L +Y+EL
Sbjct: 350 STSRQLDPNVVGQEHYNVARAVQG----TLQRYKEL 381
>gi|348589505|ref|YP_004873967.1| ATP synthase subunit alpha [Taylorella asinigenitalis MCE3]
gi|347973409|gb|AEP35944.1| ATP synthase alpha chain [Taylorella asinigenitalis MCE3]
gi|399116708|emb|CCG19516.1| ATP synthase subunit alpha [Taylorella asinigenitalis 14/45]
Length = 513
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/396 (58%), Positives = 305/396 (77%), Gaps = 2/396 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++G + T +I E+PVG ELLGR+VN+ G ID K + + +EK+
Sbjct: 73 AVILGNYIGISEGDQVKTTGRILEVPVGPELLGRVVNTLGMPIDGKGPINAQMTDVIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR+SV++PL TGIKSIDSM+PIG+GQRELIIGDRQTGKT +A+D I+NQK V
Sbjct: 133 APGVIDRQSVSQPLQTGIKSIDSMVPIGRGQRELIIGDRQTGKTAVAVDAILNQKGTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK S++ NV+ L+ + M+YT+VV+ATA++SAA QY++PY GCT+GEYFRD
Sbjct: 193 CIYVAVGQKASTVNNVVRTLEEHGAMEYTIVVSATASESAAMQYLAPYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTK AWAYRQ+SLLLRRPPGREA+PGD+FYLHSRLLER++++N ++EK
Sbjct: 253 GEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDIFYLHSRLLERAARVNTDYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TKGEVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGVRPAINAGV 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGG+AQ K+VKKLSG IR LAQYREL +FS+F+SDLD T+ QL G+++ L+K
Sbjct: 373 SVSRVGGSAQTKVVKKLSGGIRTDLAQYRELAAFSQFASDLDEATRRQLERGKRVVELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFE 561
Q ++ + EL I L + N + I ++ + FE
Sbjct: 433 QPQYQPLKVWELAISLYAVNNGYLDDIKVEDVLHFE 468
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 155/342 (45%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + GN GI V TG+ + PVG LGR++N LG PID KG IN++ I
Sbjct: 71 VGAVILGNYIGISEGDQVKTTGRILEVPVGPELLGRVVNTLGMPIDGKGPINAQMTDVIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P ++ + L+TGIK ID + P +G + + G GKT ++ I N
Sbjct: 131 KVAPGVIDRQSVSQPLQTGIKSIDSMVPIGRGQRELIIGDRQTGKTAVAVDAILN----Q 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ VG+++ N+ ++E ++ ++ +E + + G ++
Sbjct: 187 KGTGVKCIYVAVGQKASTVNNVVRTLEEHGAMEYTIVVSATASESAAMQYLAPYAGCTMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERIS---- 823
E FR+ G+D L+ D++ + A +VS +L R P Y + +L ER +
Sbjct: 247 EYFRDRGEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDIFYLHSRLLERAARVNT 306
Query: 824 -----------STKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
+ K G++T++ I A D++ P+ + D I L + G+ P
Sbjct: 307 DYVEKFTKGEVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGVRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
AI+ S S+ + G KV + ++ L +Y+EL
Sbjct: 367 AINAGVSVSR-----VGGSAQTKVVKKLSGGIRTDLAQYREL 403
>gi|332527643|ref|ZP_08403689.1| F0F1 ATP synthase subunit beta [Rubrivivax benzoatilyticus JA2]
gi|332112046|gb|EGJ12022.1| F0F1 ATP synthase subunit beta [Rubrivivax benzoatilyticus JA2]
Length = 466
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/366 (62%), Positives = 286/366 (78%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + K F + L+ + +VQQQ+G+ +VRTIA G+++G++R +V DTG
Sbjct: 13 VVDVEFPRDQMPKIFDALKLEGSPLTLEVQQQLGDGVVRTIALGSSDGLRRGLMVTDTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
I PVG TLGRI++VLG+PID +G ++ + IH P + + +LETGIKVI
Sbjct: 73 GITVPVGKATLGRIMDVLGNPIDERGPVDQTHTATIHRKAPAYDELSPSQELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVL-------DKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
+SNV+ KV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR
Sbjct: 193 SDSNVVVQENLSESKVAMVYGQMNEPPGNRLRVALTGLTMAEAFRDEGRDVLFFVDNIYR 252
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 253 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDP 312
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+Q+DP +VGEEHY V+ LQ+
Sbjct: 313 SPATTFAHLDATVVLSRDIAALGIYPAVDPLDSTSRQIDPNVVGEEHYSTTRAVQATLQR 372
Query: 907 YKELKD 912
YKEL+D
Sbjct: 373 YKELRD 378
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 132/323 (40%), Gaps = 40/323 (12%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + + T+ + AP + E L TGIK ID +
Sbjct: 76 VPVGKATLGRIMDVLGNPIDERGPVDQTHTATIHRKAPAYDELSPSQELLETGIKVIDLI 135
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K + + ++ +G++ + Y+
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDF-----YH 190
Query: 311 NCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGEYFRDLGQDCLIIYDDL 358
D VVV ++S Q P TG T+ E FRD G+D L D++
Sbjct: 191 EMSDSNVVVQENLSESKVAMVYGQMNEPPGNRLRVALTGLTMAEAFRDEGRDVLFFVDNI 250
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P + + RL ER I + G++T
Sbjct: 251 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKVGSIT 297
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L ++ PA++ S SR V G
Sbjct: 298 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIAALGIYPAVDPLDSTSRQIDPNVVGE 357
Query: 474 AQYKIVKKLSGDIRIMLAQYREL 496
Y + ++ L +Y+EL
Sbjct: 358 EHYSTTRA----VQATLQRYKEL 376
>gi|15642757|ref|NP_232390.1| ATP synthase F0F1 subunit beta [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121591160|ref|ZP_01678465.1| ATP synthase F1, beta subunit [Vibrio cholerae 2740-80]
gi|121729382|ref|ZP_01682049.1| ATP synthase F1, beta subunit [Vibrio cholerae V52]
gi|147674488|ref|YP_001218421.1| F0F1 ATP synthase subunit beta [Vibrio cholerae O395]
gi|153212975|ref|ZP_01948569.1| ATP synthase F1, beta subunit [Vibrio cholerae 1587]
gi|153803370|ref|ZP_01957956.1| ATP synthase F1, beta subunit [Vibrio cholerae MZO-3]
gi|153823452|ref|ZP_01976119.1| ATP synthase F1, beta subunit [Vibrio cholerae B33]
gi|153827188|ref|ZP_01979855.1| ATP synthase F1, beta subunit [Vibrio cholerae MZO-2]
gi|153829668|ref|ZP_01982335.1| ATP synthase F1, beta subunit [Vibrio cholerae 623-39]
gi|227082876|ref|YP_002811427.1| F0F1 ATP synthase subunit beta [Vibrio cholerae M66-2]
gi|227116558|ref|YP_002818454.1| ATP synthase F1, beta subunit [Vibrio cholerae O395]
gi|229508277|ref|ZP_04397781.1| ATP synthase beta chain [Vibrio cholerae BX 330286]
gi|229508629|ref|ZP_04398124.1| ATP synthase beta chain [Vibrio cholerae B33]
gi|229515969|ref|ZP_04405426.1| ATP synthase beta chain [Vibrio cholerae TMA 21]
gi|229517155|ref|ZP_04406601.1| ATP synthase beta chain [Vibrio cholerae RC9]
gi|229520153|ref|ZP_04409580.1| ATP synthase beta chain [Vibrio cholerae TM 11079-80]
gi|229524893|ref|ZP_04414298.1| ATP synthase beta chain [Vibrio cholerae bv. albensis VL426]
gi|229606551|ref|YP_002877199.1| F0F1 ATP synthase subunit beta [Vibrio cholerae MJ-1236]
gi|254226932|ref|ZP_04920498.1| ATP synthase F1, beta subunit [Vibrio cholerae V51]
gi|254291148|ref|ZP_04961945.1| ATP synthase F1, beta subunit [Vibrio cholerae AM-19226]
gi|254851555|ref|ZP_05240905.1| ATP synthase subunit beta [Vibrio cholerae MO10]
gi|255746826|ref|ZP_05420772.1| ATP synthase beta chain [Vibrio cholera CIRS 101]
gi|262155906|ref|ZP_06029028.1| ATP synthase beta chain [Vibrio cholerae INDRE 91/1]
gi|262167080|ref|ZP_06034795.1| ATP synthase beta chain [Vibrio cholerae RC27]
gi|360036785|ref|YP_004938548.1| F-type H+-transporting ATPase subunit beta [Vibrio cholerae O1 str.
2010EL-1786]
gi|379742532|ref|YP_005334501.1| F0F1 ATP synthase subunit beta [Vibrio cholerae IEC224]
gi|384425679|ref|YP_005635037.1| ATP synthase subunit beta [Vibrio cholerae LMA3984-4]
gi|417811073|ref|ZP_12457741.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-49A2]
gi|417814825|ref|ZP_12461469.1| ATP synthase F1, beta subunit [Vibrio cholerae HCUF01]
gi|417818592|ref|ZP_12465214.1| ATP synthase F1, beta subunit [Vibrio cholerae HE39]
gi|417822155|ref|ZP_12468757.1| ATP synthase F1, beta subunit [Vibrio cholerae HE48]
gi|418330701|ref|ZP_12941668.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-06A1]
gi|418339165|ref|ZP_12948057.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-23A1]
gi|418342235|ref|ZP_12949056.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-28A1]
gi|418347416|ref|ZP_12952158.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-43A1]
gi|418356637|ref|ZP_12959353.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-61A1]
gi|419824449|ref|ZP_14347962.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1033(6)]
gi|419831193|ref|ZP_14354674.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-1A2]
gi|419834877|ref|ZP_14358329.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-61A2]
gi|419834915|ref|ZP_14358365.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-46B1]
gi|421315317|ref|ZP_15765893.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1032(5)]
gi|421318793|ref|ZP_15769357.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1038(11)]
gi|421322846|ref|ZP_15773381.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1041(14)]
gi|421326298|ref|ZP_15776819.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1042(15)]
gi|421330222|ref|ZP_15780710.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1046(19)]
gi|421333915|ref|ZP_15784389.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1048(21)]
gi|421337731|ref|ZP_15788175.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-20A2]
gi|421341599|ref|ZP_15792010.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-43B1]
gi|421345298|ref|ZP_15795688.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-46A1]
gi|421348872|ref|ZP_15799243.1| ATP synthase F1, beta subunit [Vibrio cholerae HE-25]
gi|421352744|ref|ZP_15803084.1| ATP synthase F1, beta subunit [Vibrio cholerae HE-45]
gi|422308697|ref|ZP_16395840.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1035(8)]
gi|422897845|ref|ZP_16935277.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-40A1]
gi|422904050|ref|ZP_16939005.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-48A1]
gi|422907928|ref|ZP_16942716.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-70A1]
gi|422911735|ref|ZP_16946284.1| ATP synthase F1, beta subunit [Vibrio cholerae HFU-02]
gi|422918601|ref|ZP_16952906.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-02A1]
gi|422924054|ref|ZP_16957184.1| ATP synthase F1, beta subunit [Vibrio cholerae BJG-01]
gi|422924201|ref|ZP_16957270.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-38A1]
gi|423143267|ref|ZP_17130901.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-19A1]
gi|423148247|ref|ZP_17135624.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-21A1]
gi|423152036|ref|ZP_17139266.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-22A1]
gi|423154827|ref|ZP_17141978.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-32A1]
gi|423158691|ref|ZP_17145677.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-33A2]
gi|423166277|ref|ZP_17152987.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-48B2]
gi|423729357|ref|ZP_17702707.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-17A1]
gi|423733253|ref|ZP_17706492.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-41B1]
gi|423775167|ref|ZP_17713863.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-50A2]
gi|423823494|ref|ZP_17717497.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-55C2]
gi|423844960|ref|ZP_17718506.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-59A1]
gi|423886464|ref|ZP_17724889.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-60A1]
gi|423887662|ref|ZP_17724924.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-62A1]
gi|423920132|ref|ZP_17729537.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-77A1]
gi|423961682|ref|ZP_17735788.1| ATP synthase F1, beta subunit [Vibrio cholerae HE-40]
gi|423986039|ref|ZP_17739344.1| ATP synthase F1, beta subunit [Vibrio cholerae HE-46]
gi|423999015|ref|ZP_17742259.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-02C1]
gi|424000537|ref|ZP_17743646.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-17A2]
gi|424007513|ref|ZP_17750477.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-37A1]
gi|424007554|ref|ZP_17750516.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-44C1]
gi|424017918|ref|ZP_17757738.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-55B2]
gi|424021006|ref|ZP_17760780.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-59B1]
gi|424022500|ref|ZP_17762182.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-62B1]
gi|424025519|ref|ZP_17765155.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-69A1]
gi|424584891|ref|ZP_18024502.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1030(3)]
gi|424589265|ref|ZP_18028729.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1037(10)]
gi|424593517|ref|ZP_18032875.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1040(13)]
gi|424597446|ref|ZP_18036662.1| ATP synthase F1, beta subunit [Vibrio Cholerae CP1044(17)]
gi|424600223|ref|ZP_18039396.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1047(20)]
gi|424605122|ref|ZP_18044108.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1050(23)]
gi|424608848|ref|ZP_18047725.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-39A1]
gi|424611753|ref|ZP_18050580.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-41A1]
gi|424615644|ref|ZP_18054354.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-42A1]
gi|424620390|ref|ZP_18058937.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-47A1]
gi|424626223|ref|ZP_18064675.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-50A1]
gi|424630701|ref|ZP_18068977.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-51A1]
gi|424634750|ref|ZP_18072842.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-52A1]
gi|424637829|ref|ZP_18075828.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-55A1]
gi|424641730|ref|ZP_18079604.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-56A1]
gi|424643211|ref|ZP_18080986.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-56A2]
gi|424649825|ref|ZP_18087479.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-57A1]
gi|424651142|ref|ZP_18088683.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-57A2]
gi|424655095|ref|ZP_18092412.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-81A2]
gi|429885474|ref|ZP_19367060.1| ATP synthase beta chain [Vibrio cholerae PS15]
gi|440712084|ref|ZP_20892710.1| ATP synthase beta chain [Vibrio cholerae 4260B]
gi|443502048|ref|ZP_21069057.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-64A1]
gi|443505947|ref|ZP_21072763.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-65A1]
gi|443509785|ref|ZP_21076476.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-67A1]
gi|443513625|ref|ZP_21080187.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-68A1]
gi|443517433|ref|ZP_21083876.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-71A1]
gi|443522019|ref|ZP_21088286.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-72A2]
gi|443528893|ref|ZP_21094919.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-78A1]
gi|443528953|ref|ZP_21094976.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-7A1]
gi|443536478|ref|ZP_21102340.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-80A1]
gi|443536516|ref|ZP_21102376.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-81A1]
gi|449054649|ref|ZP_21733317.1| ATP synthase beta chain [Vibrio cholerae O1 str. Inaba G4222]
gi|14547933|sp|Q9KNH5.3|ATPB_VIBCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|172047489|sp|A5F459.1|ATPB_VIBC3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|254808173|sp|C3LSI9.1|ATPB_VIBCM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|9657365|gb|AAF95903.1| ATP synthase F1, beta subunit [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121546977|gb|EAX57122.1| ATP synthase F1, beta subunit [Vibrio cholerae 2740-80]
gi|121628663|gb|EAX61135.1| ATP synthase F1, beta subunit [Vibrio cholerae V52]
gi|124116201|gb|EAY35021.1| ATP synthase F1, beta subunit [Vibrio cholerae 1587]
gi|124121094|gb|EAY39837.1| ATP synthase F1, beta subunit [Vibrio cholerae MZO-3]
gi|125620537|gb|EAZ48905.1| ATP synthase F1, beta subunit [Vibrio cholerae V51]
gi|126519021|gb|EAZ76244.1| ATP synthase F1, beta subunit [Vibrio cholerae B33]
gi|146316371|gb|ABQ20910.1| ATP synthase F1, beta subunit [Vibrio cholerae O395]
gi|148874844|gb|EDL72979.1| ATP synthase F1, beta subunit [Vibrio cholerae 623-39]
gi|149738911|gb|EDM53235.1| ATP synthase F1, beta subunit [Vibrio cholerae MZO-2]
gi|150422993|gb|EDN14943.1| ATP synthase F1, beta subunit [Vibrio cholerae AM-19226]
gi|227010764|gb|ACP06976.1| ATP synthase F1, beta subunit [Vibrio cholerae M66-2]
gi|227012008|gb|ACP08218.1| ATP synthase F1, beta subunit [Vibrio cholerae O395]
gi|229338474|gb|EEO03491.1| ATP synthase beta chain [Vibrio cholerae bv. albensis VL426]
gi|229342747|gb|EEO07738.1| ATP synthase beta chain [Vibrio cholerae TM 11079-80]
gi|229346218|gb|EEO11190.1| ATP synthase beta chain [Vibrio cholerae RC9]
gi|229347069|gb|EEO12031.1| ATP synthase beta chain [Vibrio cholerae TMA 21]
gi|229354343|gb|EEO19271.1| ATP synthase beta chain [Vibrio cholerae B33]
gi|229354550|gb|EEO19472.1| ATP synthase beta chain [Vibrio cholerae BX 330286]
gi|229369206|gb|ACQ59629.1| ATP synthase beta chain [Vibrio cholerae MJ-1236]
gi|254847260|gb|EET25674.1| ATP synthase subunit beta [Vibrio cholerae MO10]
gi|255735583|gb|EET90982.1| ATP synthase beta chain [Vibrio cholera CIRS 101]
gi|262024466|gb|EEY43152.1| ATP synthase beta chain [Vibrio cholerae RC27]
gi|262030358|gb|EEY49000.1| ATP synthase beta chain [Vibrio cholerae INDRE 91/1]
gi|327485232|gb|AEA79639.1| ATP synthase beta chain [Vibrio cholerae LMA3984-4]
gi|340044200|gb|EGR05153.1| ATP synthase F1, beta subunit [Vibrio cholerae HE39]
gi|340045997|gb|EGR06932.1| ATP synthase F1, beta subunit [Vibrio cholerae HCUF01]
gi|340046183|gb|EGR07114.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-49A2]
gi|340049768|gb|EGR10680.1| ATP synthase F1, beta subunit [Vibrio cholerae HE48]
gi|341619054|gb|EGS44986.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-48A1]
gi|341619177|gb|EGS45033.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-70A1]
gi|341619509|gb|EGS45315.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-40A1]
gi|341634655|gb|EGS59406.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-02A1]
gi|341642158|gb|EGS66643.1| ATP synthase F1, beta subunit [Vibrio cholerae HFU-02]
gi|341642729|gb|EGS67042.1| ATP synthase F1, beta subunit [Vibrio cholerae BJG-01]
gi|341649390|gb|EGS73367.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-38A1]
gi|356423335|gb|EHH76787.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-06A1]
gi|356423992|gb|EHH77414.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-21A1]
gi|356428033|gb|EHH81263.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-19A1]
gi|356428718|gb|EHH81939.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-23A1]
gi|356436185|gb|EHH89305.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-22A1]
gi|356439134|gb|EHH92123.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-28A1]
gi|356446856|gb|EHH99647.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-32A1]
gi|356448278|gb|EHI01052.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-48B2]
gi|356448848|gb|EHI01609.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-43A1]
gi|356450809|gb|EHI03519.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-61A1]
gi|356451418|gb|EHI04103.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-33A2]
gi|356647939|gb|AET27994.1| F-type H+-transporting ATPase subunit beta [Vibrio cholerae O1 str.
2010EL-1786]
gi|378796042|gb|AFC59513.1| F0F1 ATP synthase subunit beta [Vibrio cholerae IEC224]
gi|395924281|gb|EJH35087.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1032(5)]
gi|395925430|gb|EJH36228.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1041(14)]
gi|395926546|gb|EJH37324.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1038(11)]
gi|395936022|gb|EJH46752.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1042(15)]
gi|395936397|gb|EJH47121.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1046(19)]
gi|395938278|gb|EJH48972.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1048(21)]
gi|395948227|gb|EJH58880.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-43B1]
gi|395948269|gb|EJH58920.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-20A2]
gi|395948908|gb|EJH59543.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-46A1]
gi|395956892|gb|EJH67481.1| ATP synthase F1, beta subunit [Vibrio cholerae HE-45]
gi|395957065|gb|EJH67650.1| ATP synthase F1, beta subunit [Vibrio cholerae HE-25]
gi|395965459|gb|EJH75628.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-56A2]
gi|395965608|gb|EJH75771.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-57A2]
gi|395967915|gb|EJH77939.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-42A1]
gi|395977662|gb|EJH87066.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-47A1]
gi|395979773|gb|EJH89098.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1030(3)]
gi|395980177|gb|EJH89466.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1047(20)]
gi|408010234|gb|EKG48105.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-50A1]
gi|408011474|gb|EKG49284.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-39A1]
gi|408016392|gb|EKG53940.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-52A1]
gi|408018654|gb|EKG56087.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-41A1]
gi|408021416|gb|EKG58671.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-56A1]
gi|408021560|gb|EKG58804.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-55A1]
gi|408030365|gb|EKG67031.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-57A1]
gi|408038009|gb|EKG74369.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1037(10)]
gi|408038976|gb|EKG75285.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1040(13)]
gi|408046090|gb|EKG81806.1| ATP synthase F1, beta subunit [Vibrio Cholerae CP1044(17)]
gi|408047861|gb|EKG83358.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1050(23)]
gi|408052534|gb|EKG87572.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-51A1]
gi|408058344|gb|EKG93147.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-81A2]
gi|408612979|gb|EKK86310.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1033(6)]
gi|408616824|gb|EKK89964.1| ATP synthase F1, beta subunit [Vibrio cholerae CP1035(8)]
gi|408619087|gb|EKK92129.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-1A2]
gi|408629167|gb|EKL01876.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-17A1]
gi|408632229|gb|EKL04698.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-50A2]
gi|408632719|gb|EKL05154.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-41B1]
gi|408633909|gb|EKL06195.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-55C2]
gi|408639222|gb|EKL11043.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-60A1]
gi|408646414|gb|EKL18019.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-59A1]
gi|408648356|gb|EKL19706.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-61A2]
gi|408654871|gb|EKL25998.1| ATP synthase F1, beta subunit [Vibrio cholerae HE-40]
gi|408661038|gb|EKL32032.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-77A1]
gi|408661794|gb|EKL32773.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-62A1]
gi|408662827|gb|EKL33732.1| ATP synthase F1, beta subunit [Vibrio cholerae HE-46]
gi|408843777|gb|EKL83927.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-37A1]
gi|408850904|gb|EKL90845.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-17A2]
gi|408851773|gb|EKL91638.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-02C1]
gi|408856844|gb|EKL96534.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-55B2]
gi|408859643|gb|EKL99298.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-46B1]
gi|408865512|gb|EKM04913.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-59B1]
gi|408868304|gb|EKM07640.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-44C1]
gi|408876560|gb|EKM15673.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-62B1]
gi|408882507|gb|EKM21322.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-69A1]
gi|429227696|gb|EKY33684.1| ATP synthase beta chain [Vibrio cholerae PS15]
gi|439972329|gb|ELP48624.1| ATP synthase beta chain [Vibrio cholerae 4260B]
gi|443433531|gb|ELS76032.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-64A1]
gi|443437360|gb|ELS83451.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-65A1]
gi|443441200|gb|ELS90862.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-67A1]
gi|443445016|gb|ELS98267.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-68A1]
gi|443448850|gb|ELT05459.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-71A1]
gi|443451912|gb|ELT12149.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-72A2]
gi|443452746|gb|ELT16587.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-78A1]
gi|443460216|gb|ELT27604.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-7A1]
gi|443460333|gb|ELT31422.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-80A1]
gi|443467763|gb|ELT42417.1| ATP synthase F1, beta subunit [Vibrio cholerae HC-81A1]
gi|448265795|gb|EMB03028.1| ATP synthase beta chain [Vibrio cholerae O1 str. Inaba G4222]
Length = 467
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/339 (67%), Positives = 279/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G ++R I G+++G++R V +TG PI PVG TLGRI+NVLGD ID +G+
Sbjct: 42 EVQQQLGGGVIRAIVMGSSDGLRRGMTVQNTGAPISVPVGTKTLGRIMNVLGDAIDERGD 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q +LETG+KVIDL+CPF KGGKIGLFGGAGVGKTVNMM
Sbjct: 102 IGAEEVYSIHRPAPSYEEQSSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV-------LDKVSLIYGQMNEPS 753
ELI NIA++H G SVF GVGER+REGNDFYHEM+E+ V L KV+++YGQMNEP
Sbjct: 162 ELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNVEQPELSKVAMVYGQMNEPP 221
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE+FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 222 GNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 281
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VL+R IA +G+YPA
Sbjct: 282 EMGVLQERITSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPA 341
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IDPL+S S+QLDP +VG+EHY VA V+ LQ+YKELKD
Sbjct: 342 IDPLDSTSRQLDPLVVGQEHYDVARGVQATLQRYKELKD 380
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 157/377 (41%), Gaps = 32/377 (8%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+++ L +G T +PVG + LGRI+N G+ ID + + ++ +
Sbjct: 54 AIVMGSSDGLRRGMTVQNTGAPISVPVGTKTLGRIMNVLGDAIDERGDIGAEEVYSIHRP 113
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP ++ S E L TG+K ID + P KG + + G GKT ++ I N +
Sbjct: 114 APSYEEQSSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSG 173
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCT 339
+ ++ +G++ + ++++ ++ +V + + TG T
Sbjct: 174 LSVFAGVGERTREGNDFYHEMQEAGVVNVEQPELSKVAMVYGQMNEPPGNRLRVALTGLT 233
Query: 340 IGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKI 399
+ E FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 234 MAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL 286
Query: 400 NKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRP 459
+++I + G++T+ + D+T P + D + L+ N+ P
Sbjct: 287 ------QERITSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYP 340
Query: 460 AINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKT 512
AI+ S SR V G Y + + ++ L +Y+EL+ +L K
Sbjct: 341 AIDPLDSTSRQLDPLVVGQEHYDVARG----VQATLQRYKELKDIIAILGMDELSEADKQ 396
Query: 513 QLYNGEKISLLMKQKPH 529
+ KI + Q H
Sbjct: 397 VVARARKIERFLTQPYH 413
>gi|383756082|ref|YP_005435067.1| ATP synthase subunit D [Rubrivivax gelatinosus IL144]
gi|381376751|dbj|BAL93568.1| ATP synthase subunit beta AtpD [Rubrivivax gelatinosus IL144]
Length = 466
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/366 (62%), Positives = 286/366 (78%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + K F + L+ + +VQQQ+G+ +VRTIA G+++G++R +V DTG
Sbjct: 13 VVDVEFPRDQMPKIFDALKLEGSPLTLEVQQQLGDGVVRTIALGSSDGLRRGLMVTDTGA 72
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
I PVG TLGRI++VLG+PID +G ++ + IH P + + +LETGIKVI
Sbjct: 73 GITVPVGKATLGRIMDVLGNPIDERGPVDQTHTATIHRKAPAYDELSPSQELLETGIKVI 132
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 133 DLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 192
Query: 734 KESNVL-------DKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
+SNV+ KV+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVL F+DNIYR
Sbjct: 193 SDSNVVVQENLSESKVAMVYGQMNEPPGNRLRVALTGLTMAEAFRDEGRDVLFFVDNIYR 252
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 253 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDP 312
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+Q+DP +VGEEHY V+ LQ+
Sbjct: 313 SPATTFAHLDATVVLSRDIAALGIYPAVDPLDSTSRQIDPNVVGEEHYSTTRAVQATLQR 372
Query: 907 YKELKD 912
YKEL+D
Sbjct: 373 YKELRD 378
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 132/323 (40%), Gaps = 40/323 (12%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + + T+ + AP + E L TGIK ID +
Sbjct: 76 VPVGKATLGRIMDVLGNPIDERGPVDQTHTATIHRKAPAYDELSPSQELLETGIKVIDLI 135
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K + + ++ +G++ + Y+
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDF-----YH 190
Query: 311 NCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGEYFRDLGQDCLIIYDDL 358
D VVV ++S Q P TG T+ E FRD G+D L D++
Sbjct: 191 EMSDSNVVVQENLSESKVAMVYGQMNEPPGNRLRVALTGLTMAEAFRDEGRDVLFFVDNI 250
Query: 359 TKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLT 418
++ A ++S LL R P + + RL ER I + G++T
Sbjct: 251 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKVGSIT 297
Query: 419 AFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGA 473
+ + D+T P + D + L ++ PA++ S SR V G
Sbjct: 298 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIAALGIYPAVDPLDSTSRQIDPNVVGE 357
Query: 474 AQYKIVKKLSGDIRIMLAQYREL 496
Y + ++ L +Y+EL
Sbjct: 358 EHYSTTRA----VQATLQRYKEL 376
>gi|344343248|ref|ZP_08774117.1| ATP synthase subunit alpha [Marichromatium purpuratum 984]
gi|343805179|gb|EGV23076.1| ATP synthase subunit alpha [Marichromatium purpuratum 984]
Length = 513
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 224/404 (55%), Positives = 302/404 (74%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D NL++G CT ++ E+PVG LLGR+V++ G ID K +EK+
Sbjct: 73 AVVLGDYTNLSEGDWVRCTGRVLEVPVGEGLLGRVVDALGNPIDGKGPIEAAATSPIEKL 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV+EP+ TG+K+ID+M+P+G+GQRELIIGDRQTGKT +AID IINQK+ V
Sbjct: 133 APGVIARQSVDEPMQTGLKAIDAMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKDTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK S++ ++ KL+ + MD+T++V+A A+DSAA Q+I+PY GC++GEYFRD
Sbjct: 193 CIYVAVGQKNSTIAALVRKLEEHGAMDHTIIVSAGASDSAAMQFIAPYAGCSMGEYFRDK 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D LI+YDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 253 GEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNPDYVEKA 312
Query: 408 K--IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPAIN GL
Sbjct: 313 TNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAINAGL 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K +KKL G IR+ LAQYREL +FS+F+SDLD T+ QL GE+++ LMK
Sbjct: 373 SVSRVGGAAQTKAIKKLGGGIRLALAQYRELAAFSQFASDLDETTRKQLERGERVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q + S+ ++ + L + + + ++ FE + Y +
Sbjct: 433 QAQYSPMSVGQMAVSLFAANEGYLDDVEVTKVVDFEAALQGYMK 476
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 167/372 (44%), Gaps = 25/372 (6%)
Query: 557 IELFEINIIKYFRIINLKNN---ISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ + ++ +Y+ ++ N +++N + +G + G+ + V TG+
Sbjct: 39 VRIHGLSDAQYYEMLEFPGNTYGLALNLERDSVG-----AVVLGDYTNLSEGDWVRCTGR 93
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
+ PVG+ LGR+++ LG+PID KG I + SPI L P + + ++TG+K I
Sbjct: 94 VLEVPVGEGLLGRVVDALGNPIDGKGPIEAAATSPIEKLAPGVIARQSVDEPMQTGLKAI 153
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
D + P +G + + G GKT ++ I N C +++ VG+++ ++
Sbjct: 154 DAMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKDTGVKC-IYVAVGQKNSTIAALVRKL 212
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTE 793
+E +D ++ ++ + + G S+ E FR+ G+D L+ D++ + A +
Sbjct: 213 EEHGAMDHTIIVSAGASDSAAMQFIAPYAGCSMGEYFRDKGEDALIVYDDLTKQAWAYRQ 272
Query: 794 VSAMLGRTPSAVGYQPTLAEEMGKLQERISST---------------KNGTITSVQAIYV 838
VS +L R P Y + +L ER + K G++T++ I
Sbjct: 273 VSLLLRRPPGREAYPGDVFYLHSRLLERAARVNPDYVEKATNGAVKGKTGSLTALPIIET 332
Query: 839 PADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVAN 898
A D++ P+ + D I L + GI PAI+ S S+ + + K+
Sbjct: 333 QAGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAINAGLSVSR-VGGAAQTKAIKKLGG 391
Query: 899 EVKFYLQKYKEL 910
++ L +Y+EL
Sbjct: 392 GIRLALAQYREL 403
>gi|91786238|ref|YP_547190.1| F0F1 ATP synthase subunit beta [Polaromonas sp. JS666]
gi|123060395|sp|Q12GQ0.1|ATPB_POLSJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|91695463|gb|ABE42292.1| ATP synthase F1 subcomplex beta subunit [Polaromonas sp. JS666]
Length = 467
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/366 (62%), Positives = 285/366 (77%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + K + + ++ + +VQQQ+G+ IVRTIA G ++G++R V +TG
Sbjct: 15 VVDVEFARDQMPKIYDALKMEGSALTLEVQQQLGDGIVRTIALGTSDGLRRGNTVYNTGA 74
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
I PVG TLGRI++VLG PID +G ++ +PIH P + + +LETGIKVI
Sbjct: 75 NITVPVGKATLGRIMDVLGAPIDERGPVDQTLTAPIHRKAPAYDELSPSQELLETGIKVI 134
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 135 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 194
Query: 734 KESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
+S V++ KV+++YGQMNEP GNRLRVALTGL+IAE FR+ G+DVL F+DNIYR
Sbjct: 195 ADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYR 254
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 255 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDP 314
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLDST+VLSR IA LGIYPA+DPL+S S+QLDP +VGE+HY A V+ LQ+
Sbjct: 315 SPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGEDHYATARAVQGTLQR 374
Query: 907 YKELKD 912
YKEL+D
Sbjct: 375 YKELRD 380
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 135/339 (39%), Gaps = 40/339 (11%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG LGRI++ G ID + + + AP +
Sbjct: 62 GLRRGNTVYNTGANITVPVGKATLGRIMDVLGAPIDERGPVDQTLTAPIHRKAPAYDELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 122 PSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 181
Query: 295 QKI------------SSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGE 342
++ S ++N+ N + M Y + + TG TI E
Sbjct: 182 ERTREGNDFYHEMADSGVVNLENLGESKVAMVY-----GQMNEPPGNRLRVALTGLTIAE 236
Query: 343 YFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKY 402
FRD G+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 237 SFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------- 289
Query: 403 FLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAIN 462
I + G++T+ + D+T P + D + L ++ + PA++
Sbjct: 290 ------ITSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVD 343
Query: 463 VGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
S SR V G Y + + G L +Y+EL
Sbjct: 344 PLDSTSRQLDPNVVGEDHYATARAVQG----TLQRYKEL 378
>gi|87121035|ref|ZP_01076926.1| ATP synthase subunit A [Marinomonas sp. MED121]
gi|86163527|gb|EAQ64801.1| ATP synthase subunit A [Marinomonas sp. MED121]
Length = 514
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/423 (55%), Positives = 312/423 (73%), Gaps = 2/423 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ +NL +GQK CT +I E+P+G ELLGR+V++ G ID K + + VEK+
Sbjct: 74 AVVLGGYQNLVEGQKVKCTGRILEVPIGPELLGRVVDALGNPIDGKGPVNAQLTDAVEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG+++R+SV++P+ TG K+ID+M+P+G+GQRELIIGDRQ GKT +AIDTII QK +
Sbjct: 134 APGVIERQSVDQPIQTGYKAIDAMVPVGRGQRELIIGDRQVGKTALAIDTIIAQKGSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ ++YT VV+A A+D A+ Y++PYTGCT+GEYFRD
Sbjct: 194 CVYVAIGQKQSTIANVVQKLEENGALEYTTVVSAGASDPASMLYLAPYTGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++EK
Sbjct: 254 GEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNTDYVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPA+N G+
Sbjct: 314 TNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETSLFNAGIRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQYREL +F++F+SDLD T+ QL +G++++ LMK
Sbjct: 374 SVSRVGGAAQTKIIKKLGGGIRLALAQYRELAAFAQFASDLDEATRKQLEHGKQVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIINLKNNISINKVQQQ 585
QK SI ++ +IL + F + +I FE +++ Y + INK
Sbjct: 434 QKQFSPMSIADMGVILYAANDGFLVDVETNKIGSFEQSLLSYMNSEHADLMADINKTGNY 493
Query: 586 IGE 588
GE
Sbjct: 494 NGE 496
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 153/342 (44%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G + V TG+ + P+G LGR+++ LG+PID KG +N++ +
Sbjct: 72 VGAVVLGGYQNLVEGQKVKCTGRILEVPIGPELLGRVVDALGNPIDGKGPVNAQLTDAVE 131
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG K ID + P +G + + G VGKT ++ I I
Sbjct: 132 KVAPGVIERQSVDQPIQTGYKAIDAMVPVGRGQRELIIGDRQVGKTALAIDTI----IAQ 187
Query: 711 KGCS---VFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V++ +G++ + +++E+ L+ +++ ++P+ TG ++
Sbjct: 188 KGSGIKCVYVAIGQKQSTIANVVQKLEENGALEYTTVVSAGASDPASMLYLAPYTGCTMG 247
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER S
Sbjct: 248 EYFRDRGEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNT 307
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I D++ P+ + D I L + GI P
Sbjct: 308 DYVEKFTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETSLFNAGIRP 367
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
A++ S S+ + G K+ + ++ L +Y+EL
Sbjct: 368 AMNAGISVSR-----VGGAAQTKIIKKLGGGIRLALAQYREL 404
>gi|365093998|ref|ZP_09330887.1| F0F1 ATP synthase subunit beta [Acidovorax sp. NO-1]
gi|363414056|gb|EHL21216.1| F0F1 ATP synthase subunit beta [Acidovorax sp. NO-1]
Length = 468
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/366 (62%), Positives = 287/366 (78%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + K + + L+ + +VQQQ+G+ +VRTIA G+++G++R +V +TG
Sbjct: 15 VVDVEFPRDQMPKIYDALKLEGSSLTLEVQQQLGDGVVRTIALGSSDGLRRGIMVSNTGN 74
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG PID +G ++ + IH P + + +LETGIKVI
Sbjct: 75 PITVPVGKATLGRIMDVLGTPIDERGPVSQDLTASIHRKAPAYDELSPSQELLETGIKVI 134
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 135 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 194
Query: 734 KESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
+S V++ KV+++YGQMNEP GNRLRVALTGL+IAE FR+ G+DVL F+DNIYR
Sbjct: 195 ADSGVVNLEKLEESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYR 254
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 255 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDP 314
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLDST+VLSR IA LGIYPA+DPL+S S+QLDP +VGE+HY A V+ LQ+
Sbjct: 315 SPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGEDHYSTARAVQGTLQR 374
Query: 907 YKELKD 912
YKEL+D
Sbjct: 375 YKELRD 380
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 131/318 (41%), Gaps = 30/318 (9%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID + ++ + AP + E L TGIK ID +
Sbjct: 78 VPVGKATLGRIMDVLGTPIDERGPVSQDLTASIHRKAPAYDELSPSQELLETGIKVIDLV 137
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K + + ++ +G++ + +++
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADS 197
Query: 311 NCMDYTVVVAATAADSAAEQYISP-------YTGCTIGEYFRDLGQDCLIIYDDLTKHAW 363
++ + + A + P TG TI E FRD G+D L D++ ++
Sbjct: 198 GVVNLEKLEESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTL 257
Query: 364 AYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPII 423
A ++S LL R P + + RL ER I + G++T+ +
Sbjct: 258 AGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKVGSITSIQAV 304
Query: 424 ETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKI 478
D+T P + D + L ++ + PA++ S SR V G Y
Sbjct: 305 YVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGEDHYST 364
Query: 479 VKKLSGDIRIMLAQYREL 496
+ + G L +Y+EL
Sbjct: 365 ARAVQG----TLQRYKEL 378
>gi|119475220|ref|ZP_01615573.1| ATP synthase F1, beta subunit [marine gamma proteobacterium
HTCC2143]
gi|119451423|gb|EAW32656.1| ATP synthase F1, beta subunit [marine gamma proteobacterium
HTCC2143]
Length = 465
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/339 (67%), Positives = 280/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G++ G+ R +V TG PI PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIAMGSSEGVSRGLVVESTGAPISVPVGIETLGRIMDVLGNPIDECGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I K+++ IH P + + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEKERASIHRKAPAYDELSASEDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA+EH G SVF GVGER+REGNDFY+EM+ES V++ KV+++YGQMNEP
Sbjct: 160 ELINNIALEHSGLSVFAGVGERTREGNDFYYEMQESGVVNIEEPSKSKVAMVYGQMNEPP 219
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE+FR+ GKDVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLA+
Sbjct: 220 GNRLRVALTGLTMAEKFRDEGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAQ 279
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA GIYPA
Sbjct: 280 EMGELQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPA 339
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP I+G EHY A V+ LQ+YKELKD
Sbjct: 340 VDPLDSTSRQLDPLIIGTEHYDTARGVQSVLQRYKELKD 378
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 141/342 (41%), Gaps = 42/342 (12%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ +++G T +PVG E LGRI++ G ID K R ++ + AP D
Sbjct: 59 EGVSRGLVVESTGAPISVPVGIETLGRIMDVLGNPIDECGPIGEKERASIHRKAPA-YDE 117
Query: 235 ESVNEPLL-TGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVC 292
S +E LL TGIK ID + P KG + + G GKT ++ I N + + ++
Sbjct: 118 LSASEDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIALEHSGLSVFAG 177
Query: 293 IGQKI------------SSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTI 340
+G++ S ++N+ K M Y + + TG T+
Sbjct: 178 VGERTREGNDFYYEMQESGVVNIEEPSKSKVAMVY-----GQMNEPPGNRLRVALTGLTM 232
Query: 341 GEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKIN 400
E FRD G+D L+ D++ ++ A ++S LL R P + + L ER
Sbjct: 233 AEKFRDEGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAQEMGELQER----- 287
Query: 401 KYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPA 460
I + G++T+ + D+T P + D + L ++ PA
Sbjct: 288 --------ITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPA 339
Query: 461 INVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
++ S SR + G Y + ++ +L +Y+EL+
Sbjct: 340 VDPLDSTSRQLDPLIIGTEHYDTARG----VQSVLQRYKELK 377
>gi|332285686|ref|YP_004417597.1| ATP synthase beta chain [Pusillimonas sp. T7-7]
gi|330429639|gb|AEC20973.1| ATP synthase beta chain [Pusillimonas sp. T7-7]
Length = 473
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/339 (67%), Positives = 281/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTIA G+++G++R V ++G PI PVG+ TLGRI++VLG PID +G
Sbjct: 47 EVQQQLGDGIVRTIAMGSSDGLRRGMEVANSGAPISVPVGEGTLGRIMDVLGRPIDERGP 106
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+S++ IH PKF + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNM+
Sbjct: 107 IDSEEVRAIHQDAPKFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNML 166
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVL-------DKVSLIYGQMNEPS 753
ELI NIA H G SVF GVGER+REGNDFYHEM E+ V+ KV++++GQMNEP
Sbjct: 167 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMAEAGVIKMDNLKESKVAMVFGQMNEPP 226
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVAL+GL++AE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 227 GNRLRVALSGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 286
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMGKLQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA
Sbjct: 287 EMGKLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPA 346
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKEL+D
Sbjct: 347 VDPLDSTSRQLDPQVVGEEHYAVARGVQQTLQRYKELRD 385
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 170/428 (39%), Gaps = 47/428 (10%)
Query: 132 RCLNQTLNIKFANNTVLS-----GQINGTTGYEEAA---------AQGFV-AVLIDDLKN 176
+C+ ++I+F +T+ ++ ++ + EA G V + +
Sbjct: 8 QCIGAVVDIQFPRDTIPKIYDALKLVDTSSAFAEAGLTFEVQQQLGDGIVRTIAMGSSDG 67
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G + + +PVG LGRI++ G ID + + + + AP +
Sbjct: 68 LRRGMEVANSGAPISVPVGEGTLGRIMDVLGRPIDERGPIDSEEVRAIHQDAPKFDELSP 127
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G+
Sbjct: 128 SVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMLELINNIAKAHSGLSVFAGVGE 187
Query: 296 KISSLINVINKL------KYYNCMDYTV-VVAATAADSAAEQYISPYTGCTIGEYFRDLG 348
+ + +++ K N + V +V + + +G T+ E FRD G
Sbjct: 188 RTREGNDFYHEMAEAGVIKMDNLKESKVAMVFGQMNEPPGNRLRVALSGLTMAEKFRDEG 247
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKK 408
+D L D++ ++ A ++S LL R P V Y L E K+ +++
Sbjct: 248 RDILFFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QER 294
Query: 409 IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVS 468
I + G++T+ + D+T P D + L ++ PA++ S S
Sbjct: 295 ITSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSTS 354
Query: 469 R-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEKIS 521
R V G Y + + ++ L +Y+EL +L K + KI
Sbjct: 355 RQLDPQVVGEEHYAVARG----VQQTLQRYKELRDIIAILGMDELSPEDKQAVARARKIQ 410
Query: 522 LLMKQKPH 529
+ Q H
Sbjct: 411 RFLSQPFH 418
>gi|337277980|ref|YP_004617451.1| F-ATPase subunit beta [Ramlibacter tataouinensis TTB310]
gi|334729056|gb|AEG91432.1| Candidate F-ATPase, beta chain [Ramlibacter tataouinensis TTB310]
Length = 469
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 225/366 (61%), Positives = 288/366 (78%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E ++ + + + ++ +VQQQ+G+ +VRTIA G+++G++R ++V +TG
Sbjct: 15 VVDVEFPRDHMPRVYDALKMEGTALTLEVQQQLGDGVVRTIALGSSDGLRRGSMVYNTGA 74
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG+PID +G ++ + + IH P + + +LETGIKVI
Sbjct: 75 PITVPVGKATLGRIMDVLGNPIDERGPVDQQLTAAIHRRAPAYDELSPSQELLETGIKVI 134
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 135 DLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 194
Query: 734 KESNVL-------DKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
+S V+ KV+++YGQMNEP GNRLRVALTGL+IAE FR+ G+DVL F+DNIYR
Sbjct: 195 ADSGVVKLDNLAESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYR 254
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 255 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDP 314
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLD+T+VLSR IA LGIYPA+DPL+S S+Q+DP +VGE+HY V+ LQ+
Sbjct: 315 SPATTFAHLDATVVLSRDIAALGIYPAVDPLDSTSRQVDPNVVGEDHYSTTRSVQATLQR 374
Query: 907 YKELKD 912
YKEL+D
Sbjct: 375 YKELRD 380
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 144/374 (38%), Gaps = 42/374 (11%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG LGRI++ G ID + + + + AP +
Sbjct: 62 GLRRGSMVYNTGAPITVPVGKATLGRIMDVLGNPIDERGPVDQQLTAAIHRRAPAYDELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 122 PSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGE 342
++ + Y+ D VV A+S Q P TG TI E
Sbjct: 182 ERTREGNDF-----YHEMADSGVVKLDNLAESKVAMVYGQMNEPPGNRLRVALTGLTIAE 236
Query: 343 YFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKY 402
FRD G+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 237 SFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------- 289
Query: 403 FLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAIN 462
I + G++T+ + D+T P + D + L ++ PA++
Sbjct: 290 ------ITSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIAALGIYPAVD 343
Query: 463 VGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLY 515
S SR V G Y + ++ L +Y+EL +L K +
Sbjct: 344 PLDSTSRQVDPNVVGEDHYSTTRS----VQATLQRYKELRDIIAILGMDELSPEDKLAVA 399
Query: 516 NGEKISLLMKQKPH 529
KI + Q H
Sbjct: 400 RARKIQRFLSQPFH 413
>gi|254000518|ref|YP_003052581.1| ATP synthase F1 subunit alpha [Methylovorus glucosetrophus SIP3-4]
gi|313202477|ref|YP_004041135.1| ATP synthase f1 subunit alpha [Methylovorus sp. MP688]
gi|253987197|gb|ACT52054.1| ATP synthase F1, alpha subunit [Methylovorus glucosetrophus SIP3-4]
gi|312441793|gb|ADQ85899.1| ATP synthase F1, alpha subunit [Methylovorus sp. MP688]
Length = 513
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/404 (57%), Positives = 312/404 (77%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D + +T+G C CT +I E+PVG EL+GR+VN+ G+ ID K K + +EK+
Sbjct: 73 AVVLGDYEKITEGDICKCTGRILEVPVGPELVGRVVNALGQPIDGKGPINAKLTDKIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KSIDSM+P+G+GQRELIIGDRQTGKT +A+D IINQK +N+
Sbjct: 133 APGVIARKSVSQPVQTGLKSIDSMVPVGRGQRELIIGDRQTGKTAVAVDAIINQKGQNMT 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S++ NV+ KL+ + M+YT+VVAA+A+DSAA Q+++PY GCT+GEYFRD
Sbjct: 193 CIYVAIGQKASTIANVVRKLEEHGAMEYTIVVAASASDSAALQFLAPYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFY+HSRLLER++++N+ ++EK
Sbjct: 253 GQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYIHSRLLERAARVNEDYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TNGEVKGKTGSLTALPIIETAAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKL G IR+ LAQYREL +F++F+SDLD T+ QL G ++ LMK
Sbjct: 373 SVSRVGGAAQTKVIKKLGGGIRLALAQYRELAAFAQFASDLDETTRKQLERGRLVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q + +I ++ + LL +F +P+ + FE + + +
Sbjct: 433 QAQYAPLNISDMAVTLLAANKGYFDDVPVARALAFESALHAFLK 476
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 153/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ I I TG+ + PVG +GR++N LG PID KG IN+K I
Sbjct: 71 VGAVVLGDYEKITEGDICKCTGRILEVPVGPELVGRVVNALGQPIDGKGPINAKLTDKIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GKT ++ I N ++
Sbjct: 131 KVAPGVIARKSVSQPVQTGLKSIDSMVPVGRGQRELIIGDRQTGKTAVAVDAIINQKGQN 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ + +++E ++ ++ ++ + + G ++ E F
Sbjct: 191 MTC-IYVAIGQKASTIANVVRKLEEHGAMEYTIVVAASASDSAALQFLAPYAGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 250 RDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYIHSRLLERAARVNEDYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 310 EKFTNGEVKGKTGSLTALPIIETAAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G KV + ++ L +Y+EL
Sbjct: 370 AGISVSR-----VGGAAQTKVIKKLGGGIRLALAQYREL 403
>gi|404379663|ref|ZP_10984717.1| ATP synthase subunit alpha [Simonsiella muelleri ATCC 29453]
gi|294483123|gb|EFG30810.1| ATP synthase subunit alpha [Simonsiella muelleri ATCC 29453]
Length = 515
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 233/404 (57%), Positives = 310/404 (76%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++ +G + CT +I E+PVG EL+GR+VN+ G+ ID K +EKI
Sbjct: 73 AVVLGEYEHIKEGDEVKCTGRILEVPVGRELVGRVVNALGQPIDGKGPINTNKTAPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TGIK+IDSM+P+G+GQRELIIGDRQTGKT +A+D I+NQKN VI
Sbjct: 133 APGVIARQSVDQPMQTGIKAIDSMVPVGRGQRELIIGDRQTGKTAVALDAIVNQKNTGVI 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ NV+ KL+ + M +T+VVAATA+++AA Q+I+PY+GCT+GE+FRD+
Sbjct: 193 CIYVAIGQKASSIANVVRKLEEHGAMGHTIVVAATASEAAALQFIAPYSGCTMGEFFRDI 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER+++IN +EK
Sbjct: 253 GEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARINAVEVEKL 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPAIN G+
Sbjct: 313 TNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAINAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKL G IR+ LAQYREL +FS+F+SDLD T+ QL +GE ++ LMK
Sbjct: 373 SVSRVGGAAQTKVIKKLGGGIRLALAQYRELAAFSQFASDLDEATRKQLQHGEVVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK S E+ + L I N + +P+ + FE + + + R
Sbjct: 433 QKQFNTLSTAEMALTLWAINNGSYGDVPVSKALAFEADFLSFVR 476
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 154/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G IK V TG+ + PVG +GR++N LG PID KG IN+ K +PI
Sbjct: 71 VGAVVLGEYEHIKEGDEVKCTGRILEVPVGRELVGRVVNALGQPIDGKGPINTNKTAPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TGIK ID + P +G + + G GKT ++ I N
Sbjct: 131 KIAPGVIARQSVDQPMQTGIKAIDSMVPVGRGQRELIIGDRQTGKTAVALDAIVNQKNTG 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ + +++E + ++ +E + + +G ++ E F
Sbjct: 191 VIC-IYVAIGQKASSIANVVRKLEEHGAMGHTIVVAATASEAAALQFIAPYSGCTMGEFF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTL---------------AEEM 815
R+ G+D L+ D++ + +A ++S +L R P Y + A E+
Sbjct: 250 RDIGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARINAVEV 309
Query: 816 GKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
KL K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 310 EKLTNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G KV + ++ L +Y+EL
Sbjct: 370 AGISVSR-----VGGAAQTKVIKKLGGGIRLALAQYREL 403
>gi|325460123|gb|ADZ14054.1| ATP synthase beta chain [Burkholderia terrae]
Length = 334
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/316 (72%), Positives = 269/316 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTI G+++G++R +V +T KPI PVG TLGRI++VLG PID G
Sbjct: 19 EVQQQLGDGIVRTICLGSSDGLRRGVVVKNTAKPISVPVGKATLGRIMDVLGRPIDEAGP 78
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+S+ IH PKF + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 79 ISSETTRSIHQKAPKFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 138
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 139 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 198
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 199 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 258
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 259 RITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 318
Query: 881 SKQLDPYIVGEEHYKV 896
S+Q+DP+++GEEHY +
Sbjct: 319 SRQIDPHVIGEEHYNI 334
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 124/295 (42%), Gaps = 14/295 (4%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID + ++ + AP +
Sbjct: 39 GLRRGVVVKNTAKPISVPVGKATLGRIMDVLGRPIDEAGPISSETTRSIHQKAPKFDELS 98
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 99 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 158
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 159 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 218
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 219 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 265
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 266 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSR 320
>gi|333909877|ref|YP_004483463.1| ATP synthase subunit alpha [Marinomonas posidonica IVIA-Po-181]
gi|333479883|gb|AEF56544.1| ATP synthase subunit alpha [Marinomonas posidonica IVIA-Po-181]
Length = 514
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/416 (55%), Positives = 311/416 (74%), Gaps = 2/416 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + ++L +GQK CT +I E+PVG ELLGR+V++ G ID K K + VEK+
Sbjct: 74 AVVLGNYQDLVEGQKVKCTGRILEVPVGPELLGRVVDALGNPIDGKGAVDAKLTDKVEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR+SV++P+ TG K+ID+M+P+G+GQRELIIGDRQ GKT +AIDTII QK+ +
Sbjct: 134 APGVIDRQSVDQPIQTGYKAIDAMVPVGRGQRELIIGDRQVGKTALAIDTIIAQKHSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ M+YT VVAA A+D A+ +++PYTGC++GEYFRD
Sbjct: 194 CVYVAIGQKQSTIANVVRKLEEAGAMEYTTVVAAGASDPASMLFLAPYTGCSMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S+++ ++EK
Sbjct: 254 GEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVSADYVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPA+N G+
Sbjct: 314 TNGEVKGQTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETSLFNSGIRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KIVKKL G IR+ LAQYREL +F++F+SDLD T+ QL +G++++ LMK
Sbjct: 374 SVSRVGGAAQTKIVKKLGGGIRLALAQYRELAAFAQFASDLDEATRKQLEHGKQVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIINLKNNISINK 581
QK + ++ ++L + + + +I FE +++ Y + INK
Sbjct: 434 QKQFSPMPVADMGVVLYAANDGYLEDVETSKIAGFESSLLSYMNSEHADLMADINK 489
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 157/340 (46%), Gaps = 27/340 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + GN + V TG+ + PVG LGR+++ LG+PID KG +++K +
Sbjct: 72 VGAVVLGNYQDLVEGQKVKCTGRILEVPVGPELLGRVVDALGNPIDGKGAVDAKLTDKVE 131
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P ++ + ++TG K ID + P +G + + G VGKT ++ I IA +H
Sbjct: 132 KVAPGVIDRQSVDQPIQTGYKAIDAMVPVGRGQRELIIGDRQVGKTALAIDTI--IAQKH 189
Query: 711 KGCS-VFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEE 769
G V++ +G++ + +++E+ ++ +++ ++P+ TG S+ E
Sbjct: 190 SGIKCVYVAIGQKQSTIANVVRKLEEAGAMEYTTVVAAGASDPASMLFLAPYTGCSMGEY 249
Query: 770 FRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST---- 825
FR+ G+D L+ D++ + A ++S +L R P Y + +L ER S
Sbjct: 250 FRDRGEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVSADY 309
Query: 826 -----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
+ G++T++ I D++ P+ + D I L + GI PA+
Sbjct: 310 VEKFTNGEVKGQTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETSLFNSGIRPAM 369
Query: 875 DPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
+ S S+ + G K+ + ++ L +Y+EL
Sbjct: 370 NAGISVSR-----VGGAAQTKIVKKLGGGIRLALAQYREL 404
>gi|440509594|ref|YP_007347030.1| ATP synthase subunit beta [Candidatus Blochmannia chromaiodes str.
640]
gi|440453807|gb|AGC03299.1| ATP synthase subunit beta [Candidatus Blochmannia chromaiodes str.
640]
Length = 462
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/334 (70%), Positives = 282/334 (84%)
Query: 579 INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNK 638
I +V QQ+G IVR IA GNT+G++R +V++ I PVG TLGR++NVLG+PID K
Sbjct: 42 ILEVAQQLGGGIVRCIAMGNTDGLRRGLVVINLKHSIEVPVGKETLGRVMNVLGEPIDMK 101
Query: 639 GEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVN 698
G I K+K IH P +S + ++L TGIKVIDL+CPF KGGKIGLFGGAGVGKTVN
Sbjct: 102 GPIKEKEKWSIHRSAPLYSELSTDQDLLVTGIKVIDLMCPFSKGGKIGLFGGAGVGKTVN 161
Query: 699 MMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLR 758
MMELIRNIA+EH G SVF+GVGER+REGNDFY+EM S+V++KV+L+YGQMNEP GNRLR
Sbjct: 162 MMELIRNIAVEHSGYSVFVGVGERTREGNDFYNEMINSDVINKVALVYGQMNEPPGNRLR 221
Query: 759 VALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKL 818
VALTGL++AE+FR+ G DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQ TL+EEMG L
Sbjct: 222 VALTGLTMAEKFRDEGHDVLLFIDNIYRYTLAGTEVSALLGRIPSAVGYQSTLSEEMGIL 281
Query: 819 QERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLE 878
QERI+ST G+ITSVQA+YVPADDLTDPSP+TTF+HLD+TIVLSRQIA LGIYP++DPL+
Sbjct: 282 QERITSTSLGSITSVQAVYVPADDLTDPSPATTFSHLDATIVLSRQIAALGIYPSVDPLD 341
Query: 879 SYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S S+QL+P IVG+EHY VA +VK LQ+Y+ELKD
Sbjct: 342 SNSQQLNPLIVGQEHYNVARDVKSILQRYQELKD 375
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 147/327 (44%), Gaps = 23/327 (7%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G + E+PVG E LGR++N GE ID K K + ++ + AP + +
Sbjct: 65 LRRGLVVINLKHSIEVPVGKETLGRVMNVLGEPIDMKGPIKEKEKWSIHRSAPLYSELST 124
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
+ L+TGIK ID M P KG + + G GKT ++ I N + ++V +G+
Sbjct: 125 DQDLLVTGIKVIDLMCPFSKGGKIGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFVGVGE 184
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + N++ + ++ +V + + TG T+ E FRD G D L+
Sbjct: 185 RTREGNDFYNEMINSDVINKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGHDVLLFI 244
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + +S+ + + +++I + + G
Sbjct: 245 DNIYRYTLAGTEVSALLGRIPSAVGY-------------QSTLSEEMGILQERITSTSLG 291
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P S D I L + P+++ S S+ +
Sbjct: 292 SITSVQAVYVPADDLTDPSPATTFSHLDATIVLSRQIAALGIYPSVDPLDSNSQQLNPLI 351
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y + + D++ +L +Y+EL+
Sbjct: 352 VGQEHYNVAR----DVKSILQRYQELK 374
>gi|387886253|ref|YP_006316552.1| ATP synthase subunit alpha [Francisella noatunensis subsp.
orientalis str. Toba 04]
gi|386871069|gb|AFJ43076.1| ATP synthase subunit alpha [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 513
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/396 (58%), Positives = 304/396 (76%), Gaps = 2/396 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++ +G K +CT +I E+PVG LLGR+V++ G ID K + + +EKI
Sbjct: 73 AVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEIETAHSSPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++ L TG+KSIDSM+PIG+GQRELIIGDRQ GKT IAID IINQK V
Sbjct: 133 APGVIWRKSVDQALQTGVKSIDSMVPIGRGQRELIIGDRQIGKTAIAIDAIINQKGTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ N++ +L+ + M++T++VAATA+DSAA QYI+PY GC++GEYFRD
Sbjct: 193 CIYVAIGQKASSIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N+ ++EK
Sbjct: 253 GEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GD+++F+PTNVISITDGQIFL+T+LFN RPAIN G
Sbjct: 313 TNGEVKGKTGSLTALPIIETQVGDISAFVPTNVISITDGQIFLETDLFNLGLRPAINPGN 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQ+RELE+FS+F+SDLD T+ QL G++++ L+K
Sbjct: 373 SVSRVGGAAQTKIIKKLGGGIRLALAQFRELEAFSQFASDLDEATRAQLNRGQRVTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFE 561
QK SI +++ L N + + + ++ FE
Sbjct: 433 QKQFSTLSIALMVLSLYAADNGYLDSLDVLEVIPFE 468
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 158/343 (46%), Gaps = 31/343 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ IK TG+ + PVG+ LGR+++ LG+PID KGEI + SPI
Sbjct: 71 VGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEIETAHSSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TG+K ID + P +G + + G +GKT ++ I I
Sbjct: 131 KIAPGVIWRKSVDQALQTGVKSIDSMVPIGRGQRELIIGDRQIGKTAIAIDAI----INQ 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ +G+++ + +++E ++ ++ ++ + + G S+
Sbjct: 187 KGTGVKCIYVAIGQKASSIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 247 EYFRDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNE 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I D++ P+ + D I L + LG+ P
Sbjct: 307 EYVEKFTNGEVKGKTGSLTALPIIETQVGDISAFVPTNVISITDGQIFLETDLFNLGLRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKELK 911
AI+P S S+ + G K+ + ++ L +++EL+
Sbjct: 367 AINPGNSVSR-----VGGAAQTKIIKKLGGGIRLALAQFRELE 404
>gi|225024611|ref|ZP_03713803.1| hypothetical protein EIKCOROL_01488 [Eikenella corrodens ATCC
23834]
gi|224942625|gb|EEG23834.1| hypothetical protein EIKCOROL_01488 [Eikenella corrodens ATCC
23834]
Length = 515
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/404 (57%), Positives = 311/404 (76%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+++ + +++ +G + CT +I E+PVG EL+GR+VN+ G+ ID K K +EKI
Sbjct: 73 AIVLGEYEHIKEGDQVKCTGRILEVPVGRELVGRVVNALGQPIDGKGSINAKETAPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KS+DSM+PIG+GQRELIIGDRQTGKT +A+D I+NQK VI
Sbjct: 133 APGVIARQSVDQPMQTGLKSVDSMVPIGRGQRELIIGDRQTGKTAVALDAIVNQKGTGVI 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ NV+ KL+ + M++T+VVAATA+++AA Q+I+PY+GCT+GEYFRD
Sbjct: 193 CIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQFIAPYSGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D LI+YDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER+++IN +EK+
Sbjct: 253 GEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARINADEVEKR 312
Query: 408 K--IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPAIN G+
Sbjct: 313 TNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAINAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGG+AQ K++KKL G IR+ LAQYREL +FS+F+SDLD T+ QL +GE ++ LMK
Sbjct: 373 SVSRVGGSAQTKVIKKLGGGIRLALAQYRELAAFSQFASDLDEATRKQLQHGEVVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK SI E+ + L I + IP+ + FE + + Y R
Sbjct: 433 QKQFSTMSIAEMALTLWAINKGSYEDIPVSKALAFEADFLGYVR 476
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 157/342 (45%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V I G IK V TG+ + PVG +GR++N LG PID KG IN+K+ +PI
Sbjct: 71 VGAIVLGEYEHIKEGDQVKCTGRILEVPVGRELVGRVVNALGQPIDGKGSINAKETAPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K +D + P +G + + G GKT ++ I N
Sbjct: 131 KIAPGVIARQSVDQPMQTGLKSVDSMVPIGRGQRELIIGDRQTGKTAVALDAIVN----Q 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ +G+++ + +++E ++ ++ +E + + +G ++
Sbjct: 187 KGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQFIAPYSGCTMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + +A ++S +L R P Y + +L ER +
Sbjct: 247 EYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARINA 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + GI P
Sbjct: 307 DEVEKRTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
AI+ S S+ + G KV + ++ L +Y+EL
Sbjct: 367 AINAGISVSR-----VGGSAQTKVIKKLGGGIRLALAQYREL 403
>gi|71891801|ref|YP_277530.1| ATP synthase F0F1 subunit beta [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|118573509|sp|Q494C3.1|ATPB_BLOPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|71795907|gb|AAZ40658.1| ATP synthase, F1 sector, beta-subunit [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 462
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/334 (70%), Positives = 282/334 (84%)
Query: 579 INKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNK 638
I +V QQ+G IVR IA GNT+G++R +V++ I PVG TLGR++NVLG+PID K
Sbjct: 42 ILEVAQQLGGGIVRCIAMGNTDGLRRGLVVINLKHSIEVPVGKETLGRVMNVLGEPIDMK 101
Query: 639 GEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVN 698
G I K+K IH P +S + ++L TGIKVIDL+CPF KGGKIGLFGGAGVGKTVN
Sbjct: 102 GPIKEKEKWSIHRSAPLYSELSTDQDLLVTGIKVIDLMCPFSKGGKIGLFGGAGVGKTVN 161
Query: 699 MMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLR 758
MMELIRNIA+EH G SVF+GVGER+REGNDFY+EM S+V++KV+L+YGQMNEP GNRLR
Sbjct: 162 MMELIRNIAVEHSGYSVFVGVGERTREGNDFYNEMINSDVINKVALVYGQMNEPPGNRLR 221
Query: 759 VALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKL 818
VALTGL++AE+FR+ G DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQ TL+EEMG L
Sbjct: 222 VALTGLTMAEKFRDEGHDVLLFIDNIYRYTLAGTEVSALLGRIPSAVGYQSTLSEEMGIL 281
Query: 819 QERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLE 878
QERI+ST G+ITSVQA+YVPADDLTDPSP+TTF+HLD+TIVLSRQIA LGIYP++DPL+
Sbjct: 282 QERITSTSLGSITSVQAVYVPADDLTDPSPATTFSHLDATIVLSRQIAALGIYPSVDPLD 341
Query: 879 SYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
S S+QL+P IVG+EHY VA +VK LQ+Y+ELKD
Sbjct: 342 SNSQQLNPLIVGQEHYNVARDVKSILQRYQELKD 375
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 147/327 (44%), Gaps = 23/327 (7%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G + E+PVG E LGR++N GE ID K K + ++ + AP + +
Sbjct: 65 LRRGLVVINLKHSIEVPVGKETLGRVMNVLGEPIDMKGPIKEKEKWSIHRSAPLYSELST 124
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
+ L+TGIK ID M P KG + + G GKT ++ I N + ++V +G+
Sbjct: 125 DQDLLVTGIKVIDLMCPFSKGGKIGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFVGVGE 184
Query: 296 KISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIY 355
+ + N++ + ++ +V + + TG T+ E FRD G D L+
Sbjct: 185 RTREGNDFYNEMINSDVINKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGHDVLLFI 244
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + +S+ + + +++I + + G
Sbjct: 245 DNIYRYTLAGTEVSALLGRIPSAVGY-------------QSTLSEEMGILQERITSTSLG 291
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P S D I L + P+++ S S+ +
Sbjct: 292 SITSVQAVYVPADDLTDPSPATTFSHLDATIVLSRQIAALGIYPSVDPLDSNSQQLNPLI 351
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYRELE 497
G Y + + D++ +L +Y+EL+
Sbjct: 352 VGQEHYNVAR----DVKSILQRYQELK 374
>gi|374428665|dbj|BAL49709.1| F-type ATP synthase alpha subunit [Hydrogenophilus thermoluteolus]
Length = 512
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/392 (58%), Positives = 311/392 (79%), Gaps = 2/392 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++++G T +I E+PVG ELLGR+VN+ G+ ID K K + +EK+
Sbjct: 73 AVILGDYEHISEGDTVKATGRILEVPVGPELLGRVVNALGQPIDGKGPIEAKRTDKIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+K++D+MIPIG+GQRELIIGDRQTGKT +A+DTIINQK +N+
Sbjct: 133 APGVIWRKSVSQPVQTGLKAVDTMIPIGRGQRELIIGDRQTGKTAVAVDTIINQKGQNMF 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK S++ NV+ KL+ + M+YT+VVAA+A++SAA QY++PY GCT+GEYFRD
Sbjct: 193 CIYVAVGQKASTIANVVRKLEEHGAMEYTIVVAASASESAAMQYLAPYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G D LIIYDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N+ ++E+
Sbjct: 253 GMDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVERF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPA+N G+
Sbjct: 313 TNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAVNPGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKLSG IR LAQYREL +F++F+SDLD T+ QL G +++ L+K
Sbjct: 373 SVSRVGGAAQTKIIKKLSGGIRTDLAQYRELAAFAQFASDLDEATRKQLERGRRVTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQI 557
Q + +I ++ + LL + N +F IP++Q+
Sbjct: 433 QPQYSPMNIAQMTVSLLAVNNGYFDAIPVEQV 464
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 153/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ I V TG+ + PVG LGR++N LG PID KG I +K+ I
Sbjct: 71 VGAVILGDYEHISEGDTVKATGRILEVPVGPELLGRVVNALGQPIDGKGPIEAKRTDKIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K +D + P +G + + G GKT ++ I N ++
Sbjct: 131 KVAPGVIWRKSVSQPVQTGLKAVDTMIPIGRGQRELIIGDRQTGKTAVAVDTIINQKGQN 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ VG+++ + +++E ++ ++ +E + + G ++ E F
Sbjct: 191 MFC-IYVAVGQKASTIANVVRKLEEHGAMEYTIVVAASASESAAMQYLAPYAGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 250 RDRGMDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + GI PA++
Sbjct: 310 ERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAVN 369
Query: 876 PLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
P S S+ + G K+ + ++ L +Y+EL
Sbjct: 370 PGISVSR-----VGGAAQTKIIKKLSGGIRTDLAQYREL 403
>gi|260771027|ref|ZP_05879955.1| ATP synthase beta chain [Vibrio furnissii CIP 102972]
gi|375129491|ref|YP_004991587.1| F0F1 ATP synthase subunit beta [Vibrio furnissii NCTC 11218]
gi|260613916|gb|EEX39107.1| ATP synthase beta chain [Vibrio furnissii CIP 102972]
gi|315178661|gb|ADT85575.1| F0F1 ATP synthase subunit beta [Vibrio furnissii NCTC 11218]
Length = 467
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/339 (67%), Positives = 279/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR I G+++G++R V +TG PI PVG TLGRI+NVLGD ID +GE
Sbjct: 42 EVQQQLGGGVVRAIVMGSSDGLRRGMSVENTGAPISVPVGTKTLGRIMNVLGDAIDERGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q +LETG+KVIDL+CPF KGGKIGLFGGAGVGKTVNMM
Sbjct: 102 IGAEELYSIHREAPSYEEQSNATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA++H G SVF GVGER+REGNDFYHEM+E+ V++ KV+++YGQMNEP
Sbjct: 162 ELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNIEKPEESKVAMVYGQMNEPP 221
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 222 GNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 281
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VL+R IA +G+YPA
Sbjct: 282 EMGVLQERITSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPA 341
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IDPL+S S+QLDP +VG+EHY +A V+ LQ+YKELKD
Sbjct: 342 IDPLDSTSRQLDPLVVGQEHYDIARGVQQTLQRYKELKD 380
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 149/345 (43%), Gaps = 30/345 (8%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+++ L +G T +PVG + LGRI+N G+ ID + + + ++ +
Sbjct: 54 AIVMGSSDGLRRGMSVENTGAPISVPVGTKTLGRIMNVLGDAIDERGEIGAEELYSIHRE 113
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP ++ + E L TG+K ID + P KG + + G GKT ++ I N +
Sbjct: 114 APSYEEQSNATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSG 173
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCT 339
+ ++ +G++ + ++++ ++ +V + + TG T
Sbjct: 174 LSVFAGVGERTREGNDFYHEMQEAGVVNIEKPEESKVAMVYGQMNEPPGNRLRVALTGLT 233
Query: 340 IGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKI 399
+ E FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 234 MAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL 286
Query: 400 NKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRP 459
+++I + G++T+ + D+T P + D + L+ N+ P
Sbjct: 287 ------QERITSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYP 340
Query: 460 AINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESF 499
AI+ S SR V G Y I + ++ L +Y+EL+
Sbjct: 341 AIDPLDSTSRQLDPLVVGQEHYDIARG----VQQTLQRYKELKDI 381
>gi|351733120|ref|ZP_08950811.1| F0F1 ATP synthase subunit beta [Acidovorax radicis N35]
Length = 468
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/366 (62%), Positives = 286/366 (78%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + K + + L + +VQQQ+G+ +VRTIA G+++G++R +V +T
Sbjct: 15 VVDVEFPRDQMPKIYDALKLDGSTLTLEVQQQLGDGVVRTIALGSSDGLRRGIMVTNTHA 74
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG PID +G ++ + + IH P + + +LETGIKVI
Sbjct: 75 PITVPVGKATLGRIMDVLGAPIDERGPVSQELTASIHRKAPAYDELSPSQELLETGIKVI 134
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 135 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 194
Query: 734 KESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
+S V++ KV+++YGQMNEP GNRLRVALTGL+IAE FR+ G+DVL F+DNIYR
Sbjct: 195 ADSGVVNLEKLEESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYR 254
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 255 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDP 314
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLDST+VLSR IA LGIYPA+DPL+S S+QLDP +VGE+HY A V+ LQ+
Sbjct: 315 SPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGEDHYATARAVQGTLQR 374
Query: 907 YKELKD 912
YKEL+D
Sbjct: 375 YKELRD 380
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 159/386 (41%), Gaps = 38/386 (9%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+C+ ++++F + + + +++G+T E Q G V + + L +G
Sbjct: 10 QCIGAVVDVEFPRDQMPKIYDALKLDGSTLTLEVQQQLGDGVVRTIALGSSDGLRRGIMV 69
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T +PVG LGRI++ G ID + + ++ + AP + E L T
Sbjct: 70 TNTHAPITVPVGKATLGRIMDVLGAPIDERGPVSQELTASIHRKAPAYDELSPSQELLET 129
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 130 GIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 189
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAEQYISP-------YTGCTIGEYFRDLGQDCLIIY 355
+++ ++ + + A + P TG TI E FRD G+D L
Sbjct: 190 FYHEMADSGVVNLEKLEESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFV 249
Query: 356 DDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNG 415
D++ ++ A ++S LL R P + + RL ER I + G
Sbjct: 250 DNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKVG 296
Query: 416 TLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR-----V 470
++T+ + D+T P + D + L ++ + PA++ S SR V
Sbjct: 297 SITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNV 356
Query: 471 GGAAQYKIVKKLSGDIRIMLAQYREL 496
G Y + + G L +Y+EL
Sbjct: 357 VGEDHYATARAVQG----TLQRYKEL 378
>gi|121603172|ref|YP_980501.1| F0F1 ATP synthase subunit beta [Polaromonas naphthalenivorans CJ2]
gi|190358212|sp|A1VIV2.1|ATPB1_POLNA RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
synthase F1 sector subunit beta 1; AltName:
Full=F-ATPase subunit beta 1
gi|120592141|gb|ABM35580.1| ATP synthase F1 subcomplex beta subunit [Polaromonas
naphthalenivorans CJ2]
Length = 474
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/366 (62%), Positives = 285/366 (77%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + K + + ++ + +VQQQ+G+ IVRTIA G ++G++R IV +TG
Sbjct: 22 VVDVEFARNQMPKIYDALKMEGSSLTLEVQQQLGDGIVRTIALGTSDGLRRGNIVYNTGA 81
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
I PVG TLGRI++VLG PID +G ++ +PIH P + + +LETGIKVI
Sbjct: 82 NITVPVGKATLGRIMDVLGAPIDERGPVDQTLTAPIHRKAPAYDELSPSQELLETGIKVI 141
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 142 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 201
Query: 734 KESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
+S V++ KV+++YGQMNEP GNRLRVALTGL+IAE FR+ G+DVL F+DNIYR
Sbjct: 202 ADSGVVNLDKLEDSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYR 261
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 262 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDP 321
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLDST+VLSR IA LGIYPA+DPL+S S+QL P +VGE+HY A V+ LQ+
Sbjct: 322 SPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLSPAVVGEDHYNTARAVQGTLQR 381
Query: 907 YKELKD 912
YKEL+D
Sbjct: 382 YKELRD 387
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 157/391 (40%), Gaps = 48/391 (12%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+C+ ++++FA N + + ++ G++ E Q G V + + L +G
Sbjct: 17 QCIGAVVDVEFARNQMPKIYDALKMEGSSLTLEVQQQLGDGIVRTIALGTSDGLRRGNIV 76
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
+ T +PVG LGRI++ G ID + + + AP + E L T
Sbjct: 77 YNTGANITVPVGKATLGRIMDVLGAPIDERGPVDQTLTAPIHRKAPAYDELSPSQELLET 136
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 137 GIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 196
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGEYFRDLGQD 350
Y+ D VV DS Q P TG TI E FRD G+D
Sbjct: 197 F-----YHEMADSGVVNLDKLEDSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRD 251
Query: 351 CLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIF 410
L D++ ++ A ++S LL R P + + RL ER I
Sbjct: 252 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------IT 298
Query: 411 NKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR- 469
+ G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 299 STKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQ 358
Query: 470 ----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + + G L +Y+EL
Sbjct: 359 LSPAVVGEDHYNTARAVQG----TLQRYKEL 385
>gi|325460127|gb|ADZ14056.1| ATP synthase beta chain [Burkholderia terrae]
Length = 330
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/314 (72%), Positives = 268/314 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ IVRTI G+++G++R +V +T KPI PVG TLGRI++VLG PID G
Sbjct: 16 EVQQQLGDGIVRTICLGSSDGLRRGVVVKNTAKPISVPVGKATLGRIMDVLGRPIDEAGP 75
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+S+ IH PKF + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 76 ISSETTRSIHQKAPKFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 135
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 136 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 195
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 196 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 255
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 256 RITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 315
Query: 881 SKQLDPYIVGEEHY 894
S+Q+DP+++GEEHY
Sbjct: 316 SRQIDPHVIGEEHY 329
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 124/295 (42%), Gaps = 14/295 (4%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID + ++ + AP +
Sbjct: 36 GLRRGVVVKNTAKPISVPVGKATLGRIMDVLGRPIDEAGPISSETTRSIHQKAPKFDELS 95
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 96 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 155
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 156 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 215
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 216 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 262
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 263 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSR 317
>gi|160895867|ref|YP_001561449.1| F0F1 ATP synthase subunit alpha [Delftia acidovorans SPH-1]
gi|333912094|ref|YP_004485826.1| ATP synthase F1 subunit alpha [Delftia sp. Cs1-4]
gi|226739868|sp|A9BPU5.1|ATPA_DELAS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|160361451|gb|ABX33064.1| ATP synthase F1, alpha subunit [Delftia acidovorans SPH-1]
gi|333742294|gb|AEF87471.1| ATP synthase F1, alpha subunit [Delftia sp. Cs1-4]
Length = 517
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/404 (56%), Positives = 304/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++++G CT +I E+PVG EL+GR+VN+ G+ ID K K + +EK+
Sbjct: 78 AVILGEYEHISEGDTVKCTGRILEVPVGPELIGRVVNALGQPIDGKGPINAKMTDVIEKV 137
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++PL TGIKSIDSM+P+G+GQRELIIGDRQTGKT +AID IINQK + V
Sbjct: 138 APGVIARQSVDQPLQTGIKSIDSMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQGVT 197
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ NV+ L+ M+YT+VVAATA++SAA QY+S Y+GCT+GEYFRD
Sbjct: 198 CIYVAIGQKASSIKNVVRALEQAGAMEYTIVVAATASESAAMQYVSAYSGCTMGEYFRDR 257
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDL+K A AYRQ+SLLLRRPPGREAFPGDVFYLHSRLLER++++N ++E
Sbjct: 258 GEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHSRLLERAARVNADYVEAF 317
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 318 TKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSLFNAGIRPAINAGI 377
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K+VK SG IR LAQYREL +F++F+SDLD T+ QL G +++ L+K
Sbjct: 378 SVSRVGGAAQTKLVKGQSGGIRTDLAQYRELAAFAQFASDLDEATRKQLDRGARVTELLK 437
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q + S + L + + I +KQ+ FE + ++ +
Sbjct: 438 QAQYSPLSTALMGASLFAVNKGYMDDIQVKQVLAFESGLHQFLK 481
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 154/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I V TG+ + PVG +GR++N LG PID KG IN+K I
Sbjct: 76 VGAVILGEYEHISEGDTVKCTGRILEVPVGPELIGRVVNALGQPIDGKGPINAKMTDVIE 135
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TGIK ID + P +G + + G GKT ++ I N +
Sbjct: 136 KVAPGVIARQSVDQPLQTGIKSIDSMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQG 195
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ + ++++ ++ ++ +E + + A +G ++ E F
Sbjct: 196 VTC-IYVAIGQKASSIKNVVRALEQAGAMEYTIVVAATASESAAMQYVSAYSGCTMGEYF 254
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + +A +VS +L R P + + +L ER +
Sbjct: 255 RDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHSRLLERAARVNADYV 314
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 315 EAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSLFNAGIRPAIN 374
Query: 876 PLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
S S+ + G K+ + ++ L +Y+EL
Sbjct: 375 AGISVSR-----VGGAAQTKLVKGQSGGIRTDLAQYREL 408
>gi|291615436|ref|YP_003525593.1| ATP synthase F1, subunit beta [Sideroxydans lithotrophicus ES-1]
gi|291585548|gb|ADE13206.1| ATP synthase F1, beta subunit [Sideroxydans lithotrophicus ES-1]
Length = 473
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/339 (67%), Positives = 280/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+V+QQ+G+ +VRTIA G+++G++R V TG PI PVG TLGRI++VLG PID G
Sbjct: 47 EVEQQLGDGVVRTIAMGSSDGLRRGMAVNATGNPIQVPVGTGTLGRIMDVLGRPIDEVGP 106
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S +K IH PKF + ++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNM+
Sbjct: 107 IKSDEKRSIHQAAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNML 166
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDK-------VSLIYGQMNEPS 753
ELI NIA +H G SVF GVGER+REGNDFYHEM ++ V+DK V++++GQMNEP
Sbjct: 167 ELINNIAKQHSGLSVFAGVGERTREGNDFYHEMSDAGVIDKEDFTKSKVAMVFGQMNEPP 226
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVAL+GL++AE+FR+ G+D+L F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 227 GNRLRVALSGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 286
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA
Sbjct: 287 EMGRLQERITSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIASLGIYPA 346
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP +VGEEHY VA V+ LQ+YKEL+D
Sbjct: 347 VDPLDSTSRQLDPLVVGEEHYSVARSVQQTLQRYKELRD 385
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 135/334 (40%), Gaps = 30/334 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T ++PVG LGRI++ G ID + ++ + AP +
Sbjct: 67 GLRRGMAVNATGNPIQVPVGTGTLGRIMDVLGRPIDEVGPIKSDEKRSIHQAAPKFDELS 126
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 127 PSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMLELINNIAKQHSGLSVFAGVG 186
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISP-------YTGCTIGEYFRDL 347
++ + +++ +D + A + P +G T+ E FRD
Sbjct: 187 ERTREGNDFYHEMSDAGVIDKEDFTKSKVAMVFGQMNEPPGNRLRVALSGLTMAEKFRDE 246
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 247 GRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------ 294
Query: 408 KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSV 467
I + G++T+ + D+T P D + L ++ + PA++ S
Sbjct: 295 -ITSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIASLGIYPAVDPLDST 353
Query: 468 SR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
SR V G Y + + ++ L +Y+EL
Sbjct: 354 SRQLDPLVVGEEHYSVARS----VQQTLQRYKEL 383
>gi|397661168|ref|YP_006501868.1| ATP synthase subunit alpha [Taylorella equigenitalis ATCC 35865]
gi|394349347|gb|AFN35261.1| ATP synthase subunit alpha [Taylorella equigenitalis ATCC 35865]
gi|399115636|emb|CCG18439.1| ATP synthase subunit alpha [Taylorella equigenitalis 14/56]
Length = 513
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/396 (57%), Positives = 303/396 (76%), Gaps = 2/396 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++G + T +I E+PVG ELLGR+VN+ G ID K K + +EK+
Sbjct: 73 AVILGNYTGISEGDQVKTTGRILEVPVGPELLGRVVNTLGMPIDGKGPINAKLTDVIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR+SV++PL TGIKSIDSM+PIG+GQRELIIGDRQTGKT +A+D I+NQK V
Sbjct: 133 APGVIDRQSVSQPLQTGIKSIDSMVPIGRGQRELIIGDRQTGKTAVAVDAILNQKGTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK +++ NV+ L+ + M+YT+VV+ATA++SAA QY++PY GCT+GEYFRD
Sbjct: 193 CIYVAVGQKAATVNNVVRTLEEHGAMEYTIVVSATASESAAMQYLAPYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTK AWAYRQ+SLLLRRPPGREA+PGD+FYLHSRLLER++++N ++EK
Sbjct: 253 GEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDIFYLHSRLLERAARVNTDYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGVRPAINAGV 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGG+AQ K+VKKLSG IR LAQYREL +FS+F+SDLD T+ QL G+++ L+K
Sbjct: 373 SVSRVGGSAQTKVVKKLSGGIRTDLAQYRELAAFSQFASDLDEATRRQLERGKRVVELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFE 561
Q ++ + EL + L + N + I + + FE
Sbjct: 433 QPQYQPLKVWELAVALYAVNNGYLDDIQVDDVLKFE 468
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 154/342 (45%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + GN GI V TG+ + PVG LGR++N LG PID KG IN+K I
Sbjct: 71 VGAVILGNYTGISEGDQVKTTGRILEVPVGPELLGRVVNTLGMPIDGKGPINAKLTDVIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P ++ + L+TGIK ID + P +G + + G GKT ++ I N
Sbjct: 131 KVAPGVIDRQSVSQPLQTGIKSIDSMVPIGRGQRELIIGDRQTGKTAVAVDAILN----Q 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ VG+++ N+ ++E ++ ++ +E + + G ++
Sbjct: 187 KGTGVKCIYVAVGQKAATVNNVVRTLEEHGAMEYTIVVSATASESAAMQYLAPYAGCTMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A +VS +L R P Y + +L ER +
Sbjct: 247 EYFRDRGEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDIFYLHSRLLERAARVNT 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
+ G++T++ I A D++ P+ + D I L + G+ P
Sbjct: 307 DYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGVRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
AI+ S S+ + G KV + ++ L +Y+EL
Sbjct: 367 AINAGVSVSR-----VGGSAQTKVVKKLSGGIRTDLAQYREL 403
>gi|54310642|ref|YP_131662.1| ATP synthase F0F1 subunit beta [Photobacterium profundum SS9]
gi|81828648|sp|Q6LLG8.1|ATPB1_PHOPR RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
synthase F1 sector subunit beta 1; AltName:
Full=F-ATPase subunit beta 1
gi|46915085|emb|CAG21860.1| Putative AtpD, ATP synthase F1, beta subunit [Photobacterium
profundum SS9]
Length = 468
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/339 (67%), Positives = 280/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR IA G ++G++R V +T +PI PVG TLGRI+NVLG+PID GE
Sbjct: 43 EVQQQLGGGVVRCIAMGTSDGLRRGLSVENTDRPIEVPVGIATLGRIMNVLGEPIDECGE 102
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q ++LETG+KVIDL+CPF KGGKIGLFGGAGVGKTVNMM
Sbjct: 103 IGEEQRYAIHREAPSYEEQSNETSLLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMM 162
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA++H G SVF GVGER+REGNDFY EM+E+ V++ KV+++YGQMNEP
Sbjct: 163 ELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNLENPSESKVAMVYGQMNEPP 222
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 223 GNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 282
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK+G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSRQIA LG+YPA
Sbjct: 283 EMGVLQERITSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPA 342
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IDPL+S S+ LDP +VG+EHY +A V+ LQ+YKELKD
Sbjct: 343 IDPLDSTSRMLDPLVVGQEHYDIARGVQSLLQRYKELKD 381
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 146/340 (42%), Gaps = 40/340 (11%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T++ E+PVG LGRI+N GE ID + + R + + AP ++
Sbjct: 63 GLRRGLSVENTDRPIEVPVGIATLGRIMNVLGEPIDECGEIGEEQRYAIHREAPSYEEQS 122
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TG+K ID + P KG + + G GKT ++ I N + + ++ +G
Sbjct: 123 NETSLLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVG 182
Query: 295 QKI------------SSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGE 342
++ + ++N+ N + M Y + + TG T+ E
Sbjct: 183 ERTREGNDFYFEMQEAGVVNLENPSESKVAMVY-----GQMNEPPGNRLRVALTGLTMAE 237
Query: 343 YFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKY 402
FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 238 RFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL--- 287
Query: 403 FLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAIN 462
+++I + +G++T+ + D+T P + D + L + + PAI+
Sbjct: 288 ---QERITSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPAID 344
Query: 463 VGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
S SR V G Y I + ++ +L +Y+EL+
Sbjct: 345 PLDSTSRMLDPLVVGQEHYDIARG----VQSLLQRYKELK 380
>gi|119947323|ref|YP_945003.1| F0F1 ATP synthase subunit beta [Psychromonas ingrahamii 37]
gi|190358237|sp|A1T0Y9.1|ATPB2_PSYIN RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
synthase F1 sector subunit beta 2; AltName:
Full=F-ATPase subunit beta 2
gi|119865927|gb|ABM05404.1| ATP synthase F1 subcomplex beta subunit [Psychromonas ingrahamii
37]
Length = 465
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/353 (66%), Positives = 282/353 (79%), Gaps = 8/353 (2%)
Query: 567 YFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGR 626
Y +I N+++ +VQQQIG +VR IA G ++G+ R V DTGKPI PVG TLGR
Sbjct: 27 YSALIVTAKNLTM-EVQQQIGGGVVRCIAMGASDGLSRGLDVTDTGKPITVPVGTATLGR 85
Query: 627 ILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIG 686
I+NVLG+PID GEI + + IH P + Q + LE GIKVIDL+CPF KGGKIG
Sbjct: 86 IMNVLGEPIDMCGEIGATEHYGIHREAPTYEEQSASVATLEVGIKVIDLICPFSKGGKIG 145
Query: 687 LFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNV-------L 739
LFGGAGVGKTVNMMELI NIA++H G SVF GVGER+REGNDFY EM+E+ V L
Sbjct: 146 LFGGAGVGKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVEKPEL 205
Query: 740 DKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLG 799
KV+++YGQMNEP GNRLRVALTGL++AE FR+ GKDVLLFIDNIYR+TLAGTEVSA+LG
Sbjct: 206 SKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGKDVLLFIDNIYRYTLAGTEVSALLG 265
Query: 800 RTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTI 859
R PSAVGYQPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDP+P+TTF HLD+T+
Sbjct: 266 RMPSAVGYQPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPAPATTFAHLDATV 325
Query: 860 VLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
VL+R IA +G+YPAIDPL+S S+QLDP +VG+EHY +A V+ LQ+YKELKD
Sbjct: 326 VLNRSIASMGLYPAIDPLDSTSRQLDPLVVGQEHYDIARGVQGTLQRYKELKD 378
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 141/335 (42%), Gaps = 30/335 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L++G T K +PVG LGRI+N GE ID + + + AP ++
Sbjct: 60 GLSRGLDVTDTGKPITVPVGTATLGRIMNVLGEPIDMCGEIGATEHYGIHREAPTYEEQS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCIG 294
+ L GIK ID + P KG + + G GKT ++ I N K+ + ++ +G
Sbjct: 120 ASVATLEVGIKVIDLICPFSKGGKIGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
++ + +++ ++ +V + + TG T+ E FRD
Sbjct: 180 ERTREGNDFYFEMQEAGVVNVEKPELSKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDE 239
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D L+ D++ ++ A ++S LL R P + L E + ++
Sbjct: 240 GKDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAEEMGVL------QE 286
Query: 408 KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSV 467
+I + G++T+ + D+T P + D + L+ ++ + PAI+ S
Sbjct: 287 RITSTKTGSITSIQAVYVPADDLTDPAPATTFAHLDATVVLNRSIASMGLYPAIDPLDST 346
Query: 468 SR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
SR V G Y I + + G L +Y+EL+
Sbjct: 347 SRQLDPLVVGQEHYDIARGVQG----TLQRYKELK 377
>gi|395003474|ref|ZP_10387612.1| ATP synthase, F1 beta subunit [Acidovorax sp. CF316]
gi|394318577|gb|EJE54993.1| ATP synthase, F1 beta subunit [Acidovorax sp. CF316]
Length = 468
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/366 (62%), Positives = 286/366 (78%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + K + + L+ +VQQQ+G+ +VRTIA G+++G++R +V +TG
Sbjct: 15 VVDVEFPRDQMPKIYDALKLEGTTLTLEVQQQLGDGVVRTIALGSSDGLRRGIMVTNTGN 74
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
I PVG TLGRI++VLG PID +G ++ + + IH P + + +LETGIKVI
Sbjct: 75 AITVPVGKATLGRIMDVLGAPIDERGPVSQELTASIHRKAPAYDELSPSQELLETGIKVI 134
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 135 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 194
Query: 734 KESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
+S V++ KV+++YGQMNEP GNRLRVALTGL+IAE FR+ G+DVL F+DNIYR
Sbjct: 195 ADSGVVNLEKLEDSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYR 254
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 255 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDP 314
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLDST+VLSR IA LGIYPA+DPL+S S+QLDP +VGE+HY A V+ LQ+
Sbjct: 315 SPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGEDHYATARAVQGTLQR 374
Query: 907 YKELKD 912
YKEL+D
Sbjct: 375 YKELRD 380
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 157/391 (40%), Gaps = 48/391 (12%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+C+ ++++F + + + ++ GTT E Q G V + + L +G
Sbjct: 10 QCIGAVVDVEFPRDQMPKIYDALKLEGTTLTLEVQQQLGDGVVRTIALGSSDGLRRGIMV 69
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T +PVG LGRI++ G ID + + ++ + AP + E L T
Sbjct: 70 TNTGNAITVPVGKATLGRIMDVLGAPIDERGPVSQELTASIHRKAPAYDELSPSQELLET 129
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 130 GIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 189
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGEYFRDLGQD 350
Y+ D VV DS Q P TG TI E FRD G+D
Sbjct: 190 F-----YHEMADSGVVNLEKLEDSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRD 244
Query: 351 CLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIF 410
L D++ ++ A ++S LL R P + + RL ER I
Sbjct: 245 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------IT 291
Query: 411 NKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR- 469
+ G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 292 STKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQ 351
Query: 470 ----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + + G L +Y+EL
Sbjct: 352 LDPNVVGEDHYATARAVQG----TLQRYKEL 378
>gi|375103700|ref|ZP_09749961.1| ATP synthase, F1 beta subunit [Burkholderiales bacterium JOSHI_001]
gi|374664431|gb|EHR69216.1| ATP synthase, F1 beta subunit [Burkholderiales bacterium JOSHI_001]
Length = 470
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 227/363 (62%), Positives = 285/363 (78%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + + + L+ + +VQQQ+G+ +VRTIA G+++G++R +V +T PI
Sbjct: 20 VEFARDQMPRVYDALKLEGSALTLEVQQQLGDGVVRTIALGSSDGLRRGLMVTNTKAPIT 79
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG+PID +G ++ + + IH P + + +LETGIKVIDL+
Sbjct: 80 VPVGKATLGRIMDVLGNPIDERGPVSMDQSASIHRKAPTYDELSPSQELLETGIKVIDLI 139
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM +S
Sbjct: 140 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMSDS 199
Query: 737 NVL-------DKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
V+ KV+++YGQMNEP GNRLRVALTGL+IAE FR+ GKDVL F+DNIYR+TL
Sbjct: 200 KVVVQEDLSQSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGKDVLFFVDNIYRYTL 259
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+
Sbjct: 260 AGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDPSPA 319
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLD+T+VLSR IA LGIYPA+DPL+S S+Q+DP +VGEEHY V+ LQ+YKE
Sbjct: 320 TTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVVGEEHYNTTRAVQGTLQRYKE 379
Query: 910 LKD 912
L+D
Sbjct: 380 LRD 382
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 159/391 (40%), Gaps = 48/391 (12%)
Query: 132 RCLNQTLNIKFANNTVL----SGQINGTTGYEEAAAQ---GFV-AVLIDDLKNLTQGQKC 183
+C+ ++++FA + + + ++ G+ E Q G V + + L +G
Sbjct: 12 QCIGAVVDVEFARDQMPRVYDALKLEGSALTLEVQQQLGDGVVRTIALGSSDGLRRGLMV 71
Query: 184 FCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLT 243
T+ +PVG LGRI++ G ID + + ++ + AP + E L T
Sbjct: 72 TNTKAPITVPVGKATLGRIMDVLGNPIDERGPVSMDQSASIHRKAPTYDELSPSQELLET 131
Query: 244 GIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLIN 302
GIK ID + P KG + + G GKT ++ I N K + + ++ +G++ +
Sbjct: 132 GIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGND 191
Query: 303 VINKLKYYNCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGEYFRDLGQD 350
Y+ D VVV + S Q P TG TI E FRD G+D
Sbjct: 192 F-----YHEMSDSKVVVQEDLSQSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGKD 246
Query: 351 CLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIF 410
L D++ ++ A ++S LL R P + + RL ER I
Sbjct: 247 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------IT 293
Query: 411 NKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR- 469
+ G++T+ + D+T P + D + L ++ + PA++ S SR
Sbjct: 294 STKVGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQ 353
Query: 470 ----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
V G Y + + G L +Y+EL
Sbjct: 354 IDPNVVGEEHYNTTRAVQG----TLQRYKEL 380
>gi|386289359|ref|ZP_10066489.1| F0F1 ATP synthase subunit beta [gamma proteobacterium BDW918]
gi|385277422|gb|EIF41404.1| F0F1 ATP synthase subunit beta [gamma proteobacterium BDW918]
Length = 465
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/339 (67%), Positives = 280/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G++ G++R V +T I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIALGSSEGLRRGLDVSNTNDKIRVPVGIETLGRIMDVLGNPIDECGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I K++ PIH P + +N++LETGIKVIDL+CPF +GGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEKERMPIHRKAPAYEELASSNDLLETGIKVIDLVCPFARGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA EH G SVF GVGER+REGNDFYHEM+E+ V++ KV+++YGQMNEP
Sbjct: 160 ELINNIATEHSGLSVFAGVGERTREGNDFYHEMQEAGVVNVEDFSKSKVAMVYGQMNEPP 219
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 220 GNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 279
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA GIYPA
Sbjct: 280 EMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPA 339
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP I+G EHY+VA V+ LQ+YKELKD
Sbjct: 340 VDPLDSTSRQLDPLIIGAEHYEVARGVQNVLQRYKELKD 378
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 157/370 (42%), Gaps = 32/370 (8%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T +PVG E LGRI++ G ID K R + + AP +
Sbjct: 59 EGLRRGLDVSNTNDKIRVPVGIETLGRIMDVLGNPIDECGPIGEKERMPIHRKAPAYEEL 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
S N+ L TGIK ID + P +G + + G GKT ++ I N ++ + ++ +
Sbjct: 119 ASSNDLLETGIKVIDLVCPFARGGKVGLFGGAGVGKTVNMMELINNIATEHSGLSVFAGV 178
Query: 294 GQKI---SSLINVINKLKYYNCMDYT----VVVAATAADSAAEQYISPYTGCTIGEYFRD 346
G++ + + + + N D++ +V + + TG T+ E FRD
Sbjct: 179 GERTREGNDFYHEMQEAGVVNVEDFSKSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRD 238
Query: 347 LGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK 406
G+D L+ D++ ++ A ++S LL R P V Y L E + +
Sbjct: 239 EGRDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------Q 285
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
++I + G++T+ + D+T P + D + L ++ PA++ S
Sbjct: 286 ERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAVDPLDS 345
Query: 467 VSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESFSKF--SSDLDIVTKTQLYNGEK 519
SR + GA Y++ + ++ +L +Y+EL+ +L KT + K
Sbjct: 346 TSRQLDPLIIGAEHYEVARG----VQNVLQRYKELKDIIAILGMDELSEEDKTTVERARK 401
Query: 520 ISLLMKQKPH 529
I + Q H
Sbjct: 402 IERFLSQPFH 411
>gi|325266850|ref|ZP_08133521.1| ATP synthase F1 sector alpha subunit [Kingella denitrificans ATCC
33394]
gi|324981591|gb|EGC17232.1| ATP synthase F1 sector alpha subunit [Kingella denitrificans ATCC
33394]
Length = 515
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/424 (55%), Positives = 315/424 (74%), Gaps = 2/424 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++T+G + CT +I E+P+G EL+GR+VN+ G+ ID K +EKI
Sbjct: 73 AVILGEYEHITEGDEVKCTGRILEVPIGRELVGRVVNALGQPIDGKGPINASKTAPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+K+IDSM+P+G+GQRELIIGDRQTGKT +A+D I+NQK VI
Sbjct: 133 APGVIARQSVDQPMQTGLKAIDSMVPVGRGQRELIIGDRQTGKTAVALDAIVNQKGTGVI 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK SS+ NV+ KL+ + M++T+VVAATA+++AA Q+I+PY GCT+GEYFRD+
Sbjct: 193 CIYVAVGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQFIAPYAGCTMGEYFRDI 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER+++IN +EK
Sbjct: 253 GEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARINADEVEKL 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPAIN G+
Sbjct: 313 TNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAINAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKL G IR+ LAQYREL +FS+F+SDLD T+ QL +GE ++ LMK
Sbjct: 373 SVSRVGGAAQTKVIKKLGGGIRLALAQYRELAAFSQFASDLDEATRKQLQHGEVVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIINLKNNISINKVQQQ 585
QK E+ + L I N + +P+ + FE + + R + +IN
Sbjct: 433 QKQFSTLDTAEMALTLWAINNGSYSDVPVSKALAFEAEFLSFVRTQKPETLAAINASGAM 492
Query: 586 IGEN 589
GE+
Sbjct: 493 SGED 496
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 155/342 (45%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I V TG+ + P+G +GR++N LG PID KG IN+ K +PI
Sbjct: 71 VGAVILGEYEHITEGDEVKCTGRILEVPIGRELVGRVVNALGQPIDGKGPINASKTAPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GKT ++ I N
Sbjct: 131 KIAPGVIARQSVDQPMQTGLKAIDSMVPVGRGQRELIIGDRQTGKTAVALDAIVN----Q 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ VG+++ + +++E ++ ++ +E + + G ++
Sbjct: 187 KGTGVICIYVAVGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQFIAPYAGCTMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTL---------------A 812
E FR+ G+D L+ D++ + +A ++S +L R P Y + A
Sbjct: 247 EYFRDIGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARINA 306
Query: 813 EEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
+E+ KL K G++T++ I A D++ P+ + D I L + GI P
Sbjct: 307 DEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
AI+ S S+ + G KV + ++ L +Y+EL
Sbjct: 367 AINAGISVSR-----VGGAAQTKVIKKLGGGIRLALAQYREL 403
>gi|71909721|ref|YP_287308.1| ATP synthase F1 subunit alpha [Dechloromonas aromatica RCB]
gi|115312243|sp|Q477Z3.1|ATPA_DECAR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|71849342|gb|AAZ48838.1| ATP synthase F1 subcomplex alpha subunit [Dechloromonas aromatica
RCB]
Length = 512
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 224/404 (55%), Positives = 305/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++++G T +I E+PVG ELLGR+VNS G+ ID K K + +EK+
Sbjct: 73 AVVLGEYEHISEGDIVKTTGRILEVPVGPELLGRVVNSLGQPIDGKGPINAKLTDKIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+K +DSM+P+G+GQRELIIGDRQTGKT +A+D IINQK K +
Sbjct: 133 APGVIWRQSVSQPVQTGLKCVDSMVPVGRGQRELIIGDRQTGKTAVAVDAIINQKGKGLF 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ + M+YT+VVAA A++SAA QY++PY GCT+GEYFRD
Sbjct: 193 CVYVAIGQKASTIANVVRKLEEHGAMEYTIVVAAPASESAALQYLAPYAGCTMGEYFRDT 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTK AW YRQ+SLLLRRPPGREA+PGDVFYLHSRLLER+++++ ++EK
Sbjct: 253 GEDALIIYDDLTKQAWGYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVSAAWVEKL 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA P+IET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 SNGAIKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKL G +R+ LAQYREL +F++F+SDLD T+ QL G ++ LMK
Sbjct: 373 SVSRVGGAAQTKLIKKLGGGVRLALAQYRELAAFAQFASDLDEATRKQLERGRLVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q + SI E+ + L +F + +K+ E +I Y +
Sbjct: 433 QPQYSPMSISEMAVTLYAADKGYFDDVEVKRALECEKAMIGYLK 476
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 152/339 (44%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I IV TG+ + PVG LGR++N LG PID KG IN+K I
Sbjct: 71 VGAVVLGEYEHISEGDIVKTTGRILEVPVGPELLGRVVNSLGQPIDGKGPINAKLTDKIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K +D + P +G + + G GKT ++ I N +
Sbjct: 131 KVAPGVIWRQSVSQPVQTGLKCVDSMVPVGRGQRELIIGDRQTGKTAVAVDAIINQKGKG 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C V++ +G+++ + +++E ++ ++ +E + + G ++ E F
Sbjct: 191 LFC-VYVAIGQKASTIANVVRKLEEHGAMEYTIVVAAPASESAALQYLAPYAGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R++G+D L+ D++ + +VS +L R P Y + +L ER +
Sbjct: 250 RDTGEDALIIYDDLTKQAWGYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVSAAWV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 310 EKLSNGAIKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G K+ + V+ L +Y+EL
Sbjct: 370 AGISVSR-----VGGAAQTKLIKKLGGGVRLALAQYREL 403
>gi|124265390|ref|YP_001019394.1| F0F1 ATP synthase subunit beta [Methylibium petroleiphilum PM1]
gi|190358680|sp|A2SC70.1|ATPB_METPP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|124258165|gb|ABM93159.1| Sodium-transporting two-sector ATPase [Methylibium petroleiphilum
PM1]
Length = 471
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 226/363 (62%), Positives = 285/363 (78%), Gaps = 7/363 (1%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + + + ++ + +VQQQ+G+ +VRTIA G+++G++R +V +TG I
Sbjct: 21 VEFPRDQMPRVYDALKMEGSALTLEVQQQLGDGVVRTIALGSSDGLRRGLMVSNTGAAIT 80
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI++VLG PID +G ++++ PIH P + + +LETGIKVIDL+
Sbjct: 81 VPVGKATLGRIMDVLGSPIDERGPVSAELSMPIHRKAPAYDELSPSQELLETGIKVIDLI 140
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM +S
Sbjct: 141 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMSDS 200
Query: 737 NVL-------DKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
V+ KV+++YGQMNEP GNRLRVALTGL+IAE FR+ G+DVL F+DNIYR+TL
Sbjct: 201 KVVVQEDLTQSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTL 260
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPS 849
AGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+
Sbjct: 261 AGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDPSPA 320
Query: 850 TTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKE 909
TTF HLD+T+VLSR IA LGIYPA+DPL+S S+Q+DP +VGEEHY V+ LQ+YKE
Sbjct: 321 TTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVVGEEHYNTTRAVQQVLQRYKE 380
Query: 910 LKD 912
L+D
Sbjct: 381 LRD 383
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 135/339 (39%), Gaps = 40/339 (11%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID + + + + AP +
Sbjct: 65 GLRRGLMVSNTGAAITVPVGKATLGRIMDVLGSPIDERGPVSAELSMPIHRKAPAYDELS 124
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 125 PSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 184
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGE 342
++ + Y+ D VVV S Q P TG TI E
Sbjct: 185 ERTREGNDF-----YHEMSDSKVVVQEDLTQSKVAMVYGQMNEPPGNRLRVALTGLTIAE 239
Query: 343 YFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKY 402
FRD G+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 SFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------- 292
Query: 403 FLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAIN 462
I + G++T+ + D+T P + D + L ++ + PA++
Sbjct: 293 ------ITSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVD 346
Query: 463 VGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
S SR V G Y + ++ +L +Y+EL
Sbjct: 347 PLDSTSRQIDPNVVGEEHYNTTRA----VQQVLQRYKEL 381
>gi|424865301|ref|ZP_18289170.1| ATP synthase F1, alpha subunit [SAR86 cluster bacterium SAR86B]
gi|400758907|gb|EJP73107.1| ATP synthase F1, alpha subunit [SAR86 cluster bacterium SAR86B]
Length = 514
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/416 (56%), Positives = 308/416 (74%), Gaps = 2/416 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D L +GQK CT +I E+PVG ELLGR+VN+ G ID K + K VE +
Sbjct: 74 AVVLGDYLELIEGQKATCTGRILEVPVGEELLGRVVNTLGTPIDGKGEIKTKETAPVEVV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ G+K++D+M+PIG+GQRELIIGDRQTGKT +AID IINQK +
Sbjct: 134 APGVIARQSVDQPVQIGLKAVDAMVPIGRGQRELIIGDRQTGKTAVAIDAIINQKGTGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S++ NV+ KL+ + +++T+VV+A AAD A Q++S Y GCT+GEYFRD
Sbjct: 194 CIYVAIGQKQSTVANVVKKLEEHGALEHTIVVSAPAADPAPMQFLSAYAGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDL+K A AYRQ+SLLL+RPPGREA+PGDVFYLHSRLLERS+++N ++EK
Sbjct: 254 GEDALIVYDDLSKQAVAYRQVSLLLKRPPGREAYPGDVFYLHSRLLERSARVNAEYVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPAIN G+
Sbjct: 314 TNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAINPGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKLSG +R LAQYREL SFS+F+SDLD TK QL +G++I+ L+K
Sbjct: 374 SVSRVGGAAQTKIMKKLSGGVRTALAQYRELASFSQFASDLDDATKAQLASGQRITELLK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIINLKNNISINK 581
QK + S+ + I L + +P+++I FE + YF + SIN+
Sbjct: 434 QKQYSPLSVAQQSISLFAADRGYMDDVPVEKIGDFESALHGYFTSEEAELESSINE 489
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 172/383 (44%), Gaps = 39/383 (10%)
Query: 557 IELFEINIIKYFRIINLKNNI---SINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ L + + Y +I +N + ++N Q +G + G+ + TG+
Sbjct: 40 VRLHGMGDVMYGELIEFENGVLGLALNLEQDSVG-----AVVLGDYLELIEGQKATCTGR 94
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
+ PVG+ LGR++N LG PID KGEI +K+ +P+ + P + + ++ G+K +
Sbjct: 95 ILEVPVGEELLGRVVNTLGTPIDGKGEIKTKETAPVEVVAPGVIARQSVDQPVQIGLKAV 154
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCS---VFIGVGERSREGNDFY 730
D + P +G + + G GKT ++ I I KG +++ +G++ +
Sbjct: 155 DAMVPIGRGQRELIIGDRQTGKTAVAIDAI----INQKGTGIKCIYVAIGQKQSTVANVV 210
Query: 731 HEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLA 790
+++E L+ ++ +P+ + A G ++ E FR+ G+D L+ D++ + +A
Sbjct: 211 KKLEEHGALEHTIVVSAPAADPAPMQFLSAYAGCTMGEYFRDRGEDALIVYDDLSKQAVA 270
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST---------------KNGTITSVQA 835
+VS +L R P Y + +L ER + K G++T++
Sbjct: 271 YRQVSLLLKRPPGREAYPGDVFYLHSRLLERSARVNAEYVEKFTNGEVKGKTGSLTALPI 330
Query: 836 IYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYK 895
I A D++ P+ + D I L + GI PAI+P S S+ + G K
Sbjct: 331 IETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAINPGISVSR-----VGGAAQTK 385
Query: 896 VANE----VKFYLQKYKELKDTS 914
+ + V+ L +Y+EL S
Sbjct: 386 IMKKLSGGVRTALAQYRELASFS 408
>gi|241765094|ref|ZP_04763085.1| ATP synthase F1, beta subunit [Acidovorax delafieldii 2AN]
gi|241365286|gb|EER60114.1| ATP synthase F1, beta subunit [Acidovorax delafieldii 2AN]
Length = 468
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/366 (62%), Positives = 286/366 (78%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + K + + L+ + +VQQQ+G+ +VRTIA G+++G++R +V +TG
Sbjct: 15 VVDVEFPRDQMPKIYDALKLEGSSLTLEVQQQLGDGVVRTIALGSSDGLRRGIMVTNTGS 74
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
I PVG TLGRI++VLG PID +G ++ + IH P + + +LETGIKVI
Sbjct: 75 AITVPVGKATLGRIMDVLGAPIDERGPVSQDLTASIHRKAPAYDELSPSQELLETGIKVI 134
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 135 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 194
Query: 734 KESNVLD-------KVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
+S V++ KV+++YGQMNEP GNRLRVALTGL+IAE FR+ G+DVL F+DNIYR
Sbjct: 195 ADSGVVNLEKLEDSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYR 254
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 255 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDP 314
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLDST+VLSR IA LGIYPA+DPL+S S+QLDP +VGE+HY A V+ LQ+
Sbjct: 315 SPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGEDHYATARAVQGTLQR 374
Query: 907 YKELKD 912
YKEL+D
Sbjct: 375 YKELRD 380
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 134/339 (39%), Gaps = 40/339 (11%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T +PVG LGRI++ G ID + ++ + AP +
Sbjct: 62 GLRRGIMVTNTGSAITVPVGKATLGRIMDVLGAPIDERGPVSQDLTASIHRKAPAYDELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 122 PSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGE 342
++ + Y+ D VV DS Q P TG TI E
Sbjct: 182 ERTREGNDF-----YHEMADSGVVNLEKLEDSKVAMVYGQMNEPPGNRLRVALTGLTIAE 236
Query: 343 YFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKY 402
FRD G+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 237 SFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------- 289
Query: 403 FLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAIN 462
I + G++T+ + D+T P + D + L ++ + PA++
Sbjct: 290 ------ITSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVD 343
Query: 463 VGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
S SR V G Y + + G L +Y+EL
Sbjct: 344 PLDSTSRQLDPNVVGEDHYATARAVQG----TLQRYKEL 378
>gi|399021084|ref|ZP_10723203.1| ATP synthase, F1 beta subunit [Herbaspirillum sp. CF444]
gi|398093068|gb|EJL83458.1| ATP synthase, F1 beta subunit [Herbaspirillum sp. CF444]
Length = 466
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 227/339 (66%), Positives = 277/339 (81%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G ++G++R + +TGK I PVG TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIALGTSDGLRRGMTIKNTGKGITVPVGKATLGRIMDVLGNPIDECGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
++ + + IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 VSHEHTATIHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA H G SVF GVGER+REGNDFYHEM ++ V+D KV+++YGQMNEP
Sbjct: 160 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADAKVVDLENPENSKVAMVYGQMNEPP 219
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL+IAE FR+ GKDVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 220 GNRLRVALTGLTIAEGFRDEGKDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 279
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA
Sbjct: 280 EMGRLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPA 339
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP +VG+EHY+ A V+ LQ+YKEL+D
Sbjct: 340 VDPLDSTSRQLDPQVVGQEHYETARAVQGTLQRYKELRD 378
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 137/334 (41%), Gaps = 30/334 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID ++ T+ + AP +
Sbjct: 60 GLRRGMTIKNTGKGITVPVGKATLGRIMDVLGNPIDECGPVSHEHTATIHRKAPAYDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 PSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
++ + +++ +D +V + + TG TI E FRD
Sbjct: 180 ERTREGNDFYHEMADAKVVDLENPENSKVAMVYGQMNEPPGNRLRVALTGLTIAEGFRDE 239
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 240 GKDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------------ 287
Query: 408 KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSV 467
I + G++T+ + D+T P + D + L ++ + PA++ S
Sbjct: 288 -ITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDST 346
Query: 468 SR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
SR V G Y+ + + G L +Y+EL
Sbjct: 347 SRQLDPQVVGQEHYETARAVQG----TLQRYKEL 376
>gi|319778923|ref|YP_004129836.1| ATP synthase subunit alpha [Taylorella equigenitalis MCE9]
gi|317108947|gb|ADU91693.1| ATP synthase alpha chain [Taylorella equigenitalis MCE9]
Length = 513
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 227/396 (57%), Positives = 303/396 (76%), Gaps = 2/396 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++G + T +I E+PVG ELLGR+VN+ G ID K + + +EK+
Sbjct: 73 AVILGNYTGISEGDQVKTTGRILEVPVGPELLGRVVNTLGMPIDGKGPINAQLTDVIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR+SV++PL TGIKSIDSM+PIG+GQRELIIGDRQTGKT +A+D I+NQK V
Sbjct: 133 APGVIDRQSVSQPLQTGIKSIDSMVPIGRGQRELIIGDRQTGKTAVAVDAILNQKGTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK +++ NV+ L+ + M+YT+VV+ATA++SAA QY++PY GCT+GEYFRD
Sbjct: 193 CIYVAVGQKAATVNNVVRTLEEHGAMEYTIVVSATASESAAMQYLAPYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTK AWAYRQ+SLLLRRPPGREA+PGD+FYLHSRLLER++++N ++EK
Sbjct: 253 GEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDIFYLHSRLLERAARVNTDYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGVRPAINAGV 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGG+AQ K+VKKLSG IR LAQYREL +FS+F+SDLD T+ QL G+++ L+K
Sbjct: 373 SVSRVGGSAQTKVVKKLSGGIRTDLAQYRELAAFSQFASDLDEATRRQLERGKRVVELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFE 561
Q ++ + EL + L + N + I + + FE
Sbjct: 433 QPQYQPLKVWELAVALYAVNNGYLDDIQVDDVLKFE 468
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 154/342 (45%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + GN GI V TG+ + PVG LGR++N LG PID KG IN++ I
Sbjct: 71 VGAVILGNYTGISEGDQVKTTGRILEVPVGPELLGRVVNTLGMPIDGKGPINAQLTDVIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P ++ + L+TGIK ID + P +G + + G GKT ++ I N
Sbjct: 131 KVAPGVIDRQSVSQPLQTGIKSIDSMVPIGRGQRELIIGDRQTGKTAVAVDAILN----Q 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ VG+++ N+ ++E ++ ++ +E + + G ++
Sbjct: 187 KGTGVKCIYVAVGQKAATVNNVVRTLEEHGAMEYTIVVSATASESAAMQYLAPYAGCTMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A +VS +L R P Y + +L ER +
Sbjct: 247 EYFRDRGEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDIFYLHSRLLERAARVNT 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
+ G++T++ I A D++ P+ + D I L + G+ P
Sbjct: 307 DYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGVRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
AI+ S S+ + G KV + ++ L +Y+EL
Sbjct: 367 AINAGVSVSR-----VGGSAQTKVVKKLSGGIRTDLAQYREL 403
>gi|389770414|ref|ZP_10192057.1| F0F1 ATP synthase subunit beta [Rhodanobacter sp. 115]
gi|388429735|gb|EIL87001.1| F0F1 ATP synthase subunit beta [Rhodanobacter sp. 115]
Length = 477
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/345 (67%), Positives = 279/345 (80%), Gaps = 13/345 (3%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQ +G+ IVRTIA G+T G+KR +TG+ I PVGD TLGRI++VLG+PID G
Sbjct: 40 EVQQVLGDGIVRTIALGSTEGLKRGLAARNTGEGIKVPVGDATLGRIMDVLGNPIDEVGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I++K + IH P + Q N++LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNM+
Sbjct: 100 IDAKDRWVIHREAPSYDEQAATNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNML 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVL-------DKVSLIYGQMNEPS 753
ELI NIA +H G SVF GVGER+REGNDFYHEM+E+ V+ KV+++YGQMNEP
Sbjct: 160 ELINNIATQHAGLSVFAGVGERTREGNDFYHEMQEAGVVKIDNLPESKVAMVYGQMNEPP 219
Query: 754 GNRLRVALTGLSIAEEFRNS------GKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY 807
GNRLRVALTGL++AE FR+ GKDVL F+DNIYR+TLAGTEVSA+LGR PSAVGY
Sbjct: 220 GNRLRVALTGLTMAEYFRDQKDESGKGKDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGY 279
Query: 808 QPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAE 867
QPTLAEEMG LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+ LSR IA
Sbjct: 280 QPTLAEEMGVLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIAS 339
Query: 868 LGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
LGIYPA+DPL+S S+QLDP +VG+EHY+VA V+ LQ+YKELKD
Sbjct: 340 LGIYPAVDPLDSTSRQLDPQVVGQEHYEVARTVQGMLQRYKELKD 384
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 148/342 (43%), Gaps = 36/342 (10%)
Query: 175 KNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDR 234
+ L +G T + ++PVG LGRI++ G ID K+R + + AP ++
Sbjct: 59 EGLKRGLAARNTGEGIKVPVGDATLGRIMDVLGNPIDEVGPIDAKDRWVIHREAPSYDEQ 118
Query: 235 ESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV-ICIYVCI 293
+ N+ L TGIK ID + P KG + + G GKT ++ I N ++ + ++ +
Sbjct: 119 AATNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMLELINNIATQHAGLSVFAGV 178
Query: 294 GQKISSLINVINKLKYYNCM-------DYTVVVAATAADSAAEQYISPYTGCTIGEYFRD 346
G++ + ++++ + +V + + TG T+ EYFRD
Sbjct: 179 GERTREGNDFYHEMQEAGVVKIDNLPESKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRD 238
Query: 347 L------GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKIN 400
G+D L D++ ++ A ++S LL R P V Y L E +
Sbjct: 239 QKDESGKGKDVLFFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL- 290
Query: 401 KYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPA 460
+++I + G++T+ + D+T P + D + L N+ + PA
Sbjct: 291 -----QERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPA 345
Query: 461 INVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
++ S SR V G Y++ + + G ML +Y+EL+
Sbjct: 346 VDPLDSTSRQLDPQVVGQEHYEVARTVQG----MLQRYKELK 383
>gi|88797169|ref|ZP_01112759.1| ATP synthase subunit A [Reinekea blandensis MED297]
gi|88780038|gb|EAR11223.1| ATP synthase subunit A [Reinekea sp. MED297]
Length = 514
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 225/403 (55%), Positives = 303/403 (75%), Gaps = 2/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D KNL +GQ C CT +I E+PVG ELLGR+V++ G ID K K + +EK+
Sbjct: 74 AVVLGDYKNLAEGQSCKCTGRILEVPVGPELLGRVVDALGNAIDGKGDISAKLTDPIEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG K++DSM+PIG+GQRELIIGDRQTGKT +A+D I+ QK +
Sbjct: 134 APGVIARQSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGKTAMAVDAILAQKGTGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV +GQK S++ NV+ KL+ M+YT VV A+A++ A+ Q+++PY+GC++GEYFRD
Sbjct: 194 CVYVAVGQKRSTIANVVRKLEENGAMEYTTVVVASASEPASMQFLAPYSGCSMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++E+
Sbjct: 254 GEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNAEYVEEF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPA+N G+
Sbjct: 314 TKGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETDLFNAGVRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGG+AQ KI+KKLSG IR LAQYREL +FS+F+SDLD TK QL +G +++ LMK
Sbjct: 374 SVSRVGGSAQTKIMKKLSGGIRTALAQYRELAAFSQFASDLDDATKAQLEHGARVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
Q + S+ E+ + + + + I +I FE + Y
Sbjct: 434 QGQYSPMSVAEMAVSVYAANEGYLEDLEISEILAFEAALHGYM 476
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 157/345 (45%), Gaps = 31/345 (8%)
Query: 588 ENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKS 647
++ V + G+ + TG+ + PVG LGR+++ LG+ ID KG+I++K
Sbjct: 69 QDSVGAVVLGDYKNLAEGQSCKCTGRILEVPVGPELLGRVVDALGNAIDGKGDISAKLTD 128
Query: 648 PIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIA 707
PI + P + + ++TG K +D + P +G + + G GKT ++ I
Sbjct: 129 PIEKVAPGVIARQSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGKTAMAVDAI---- 184
Query: 708 IEHKGCS---VFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGL 764
+ KG V++ VG++ + +++E+ ++ +++ +EP+ + +G
Sbjct: 185 LAQKGTGIKCVYVAVGQKRSTIANVVRKLEENGAMEYTTVVVASASEPASMQFLAPYSGC 244
Query: 765 SIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISS 824
S+ E FR+ G+D L+ D++ + +A ++S +L R P Y + +L ER S
Sbjct: 245 SMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASR 304
Query: 825 T---------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELG 869
K G++T++ I D++ P+ + D I L + G
Sbjct: 305 VNAEYVEEFTKGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETDLFNAG 364
Query: 870 IYPAIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
+ PA++ S S+ + G K+ + ++ L +Y+EL
Sbjct: 365 VRPAMNAGISVSR-----VGGSAQTKIMKKLSGGIRTALAQYREL 404
>gi|304313403|ref|YP_003813001.1| F1-ATP synthase subunit alpha [gamma proteobacterium HdN1]
gi|301799136|emb|CBL47379.1| F1-ATP synthase, alpha subunit [gamma proteobacterium HdN1]
Length = 514
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 224/402 (55%), Positives = 308/402 (76%), Gaps = 2/402 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +L +GQK CT K+ E+P+G LLGR+V++ G ID K + +EK+
Sbjct: 74 AVVLGNYLDLAEGQKVQCTSKVLEVPIGDALLGRVVDALGNPIDGKGPINSTLTDRIEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KS+DSM+PIG+GQRELIIGDRQ GKT +AIDTIINQK +
Sbjct: 134 APGVIWRKSVDQPVQTGMKSVDSMVPIGRGQRELIIGDRQIGKTALAIDTIINQKGSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ NV+ KL+ M +T++V A+A+D A+ Q+I+P+TGCT+GEYFRD
Sbjct: 194 CIYVAIGQKQSSIANVVRKLEENGAMAHTIIVVASASDPASMQFIAPFTGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LIIYDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER+++++ ++EK
Sbjct: 254 GQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVSAEYVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+++LFN+ RPA+N G+
Sbjct: 314 TNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESSLFNAGIRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQYREL +F++F+SDLD T+ QL +G++++ LMK
Sbjct: 374 SVSRVGGAAQTKIIKKLGGGIRLALAQYRELAAFAQFASDLDEATRKQLEHGQRVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKY 567
QK + ++ E+ +++ + + + +K+I FE +++
Sbjct: 434 QKQYSPLTVAEMALVIYLANEGYLNDVELKKITAFETAFLQF 475
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 156/345 (45%), Gaps = 31/345 (8%)
Query: 588 ENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKS 647
++ V + GN + V T K + P+GD LGR+++ LG+PID KG INS
Sbjct: 69 QDSVGAVVLGNYLDLAEGQKVQCTSKVLEVPIGDALLGRVVDALGNPIDGKGPINSTLTD 128
Query: 648 PIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIA 707
I + P + + ++TG+K +D + P +G + + G +GKT ++ I
Sbjct: 129 RIEKVAPGVIWRKSVDQPVQTGMKSVDSMVPIGRGQRELIIGDRQIGKTALAIDTI---- 184
Query: 708 IEHKGCS---VFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGL 764
I KG +++ +G++ + +++E+ + ++ ++P+ + TG
Sbjct: 185 INQKGSGIKCIYVAIGQKQSSIANVVRKLEENGAMAHTIIVVASASDPASMQFIAPFTGC 244
Query: 765 SIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISS 824
++ E FR+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 245 TMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAR 304
Query: 825 T---------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELG 869
K G++T++ I A D++ P+ + D I L + G
Sbjct: 305 VSAEYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESSLFNAG 364
Query: 870 IYPAIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
I PA++ S S+ + G K+ + ++ L +Y+EL
Sbjct: 365 IRPAMNAGISVSR-----VGGAAQTKIIKKLGGGIRLALAQYREL 404
>gi|325460066|gb|ADZ14030.1| ATP synthase beta chain [Burkholderia glathei]
Length = 326
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/313 (73%), Positives = 267/313 (85%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R TIV +TGKPI PVG TLGRI++VLG PID G
Sbjct: 14 EVQQQLGDGVVRTICLGASDGLRRGTIVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGP 73
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
INS IH PKF + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 74 INSDVTRGIHQKAPKFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 133
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 134 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 193
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 194 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 253
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 254 RITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 313
Query: 881 SKQLDPYIVGEEH 893
S+Q+DP+++GEEH
Sbjct: 314 SRQIDPHVIGEEH 326
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 122/295 (41%), Gaps = 14/295 (4%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID + + AP +
Sbjct: 34 GLRRGTIVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPINSDVTRGIHQKAPKFDELS 93
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 94 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 153
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 154 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 213
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 214 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 260
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 261 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSR 315
>gi|388568894|ref|ZP_10155303.1| F-ATPase subunit beta [Hydrogenophaga sp. PBC]
gi|388263850|gb|EIK89431.1| F-ATPase subunit beta [Hydrogenophaga sp. PBC]
Length = 470
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 227/366 (62%), Positives = 285/366 (77%), Gaps = 7/366 (1%)
Query: 554 IKQIELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +E + + + + ++ + +VQQQ+G+ +VRTIA G+++G++R V +T
Sbjct: 15 VVDVEFPRDKMPRVYDALKMEGSALTLEVQQQLGDGVVRTIALGSSDGLRRGMQVTNTNA 74
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
PI PVG TLGRI++VLG+PID +G ++ + IH P + + +LETGIKVI
Sbjct: 75 PITVPVGKATLGRIMDVLGNPIDERGPVDQTLTASIHRKAPAYDELSPSQELLETGIKVI 134
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
DL+CPF KGGK+GLFGGAGVGKTVNMMELI NIA H G SVF GVGER+REGNDFYHEM
Sbjct: 135 DLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEM 194
Query: 734 KESNVL-------DKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYR 786
+S V+ KV+++YGQMNEP GNRLRVALTGL+IAE FR+ G+DVL F+DNIYR
Sbjct: 195 ADSGVVKLDNLAESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYR 254
Query: 787 FTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDP 846
+TLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQERI+STK G+ITS+QA+YVPADDLTDP
Sbjct: 255 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDP 314
Query: 847 SPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQK 906
SP+TTF HLDST+VLSR IA LGIYPA+DPL+S S+QLDP +VG+EHY A V+ LQ+
Sbjct: 315 SPATTFAHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPLVVGDEHYSTARAVQGTLQR 374
Query: 907 YKELKD 912
YKEL+D
Sbjct: 375 YKELRD 380
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 135/339 (39%), Gaps = 40/339 (11%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG LGRI++ G ID + ++ + AP +
Sbjct: 62 GLRRGMQVTNTNAPITVPVGKATLGRIMDVLGNPIDERGPVDQTLTASIHRKAPAYDELS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 122 PSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 181
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAE----QYISP--------YTGCTIGE 342
++ + Y+ D VV A+S Q P TG TI E
Sbjct: 182 ERTREGNDF-----YHEMADSGVVKLDNLAESKVAMVYGQMNEPPGNRLRVALTGLTIAE 236
Query: 343 YFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKY 402
FRD G+D L D++ ++ A ++S LL R P + + RL ER
Sbjct: 237 SFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER------- 289
Query: 403 FLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAIN 462
I + G++T+ + D+T P + D + L ++ PA++
Sbjct: 290 ------ITSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAALGIYPAVD 343
Query: 463 VGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
S SR V G Y + + G L +Y+EL
Sbjct: 344 PLDSTSRQLDPLVVGDEHYSTARAVQG----TLQRYKEL 378
>gi|340789571|ref|YP_004755036.1| ATP synthase subunit beta [Collimonas fungivorans Ter331]
gi|340554838|gb|AEK64213.1| ATP synthase beta chain [Collimonas fungivorans Ter331]
Length = 466
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 225/339 (66%), Positives = 277/339 (81%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTIA G ++G++R + +TG+PI+ P G TLGRI++VLG+PID G
Sbjct: 40 EVQQQLGDGVVRTIALGTSDGLRRGMTIKNTGQPIMVPTGKATLGRIMDVLGNPIDECGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
++ + + IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 VSHETTASIHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA H G SVF GVGER+REGNDFYHEM ++ V+D KV+++YGQMNEP
Sbjct: 160 ELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADAKVVDLENPEKSKVAMVYGQMNEPP 219
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL+IAE FR+ GKDVL F+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLA
Sbjct: 220 GNRLRVALTGLTIAEGFRDEGKDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAS 279
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG+LQERI+STK G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA LGIYPA
Sbjct: 280 EMGQLQERITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPA 339
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP +VG+EHY+ A V+ LQ+YKEL+D
Sbjct: 340 VDPLDSTSRQLDPQVVGQEHYETARAVQGILQRYKELRD 378
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 136/334 (40%), Gaps = 30/334 (8%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T + +P G LGRI++ G ID + ++ + AP +
Sbjct: 60 GLRRGMTIKNTGQPIMVPTGKATLGRIMDVLGNPIDECGPVSHETTASIHRKAPAYDELS 119
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K + + ++ +G
Sbjct: 120 PSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179
Query: 295 QKISSLINVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
++ + +++ +D +V + + TG TI E FRD
Sbjct: 180 ERTREGNDFYHEMADAKVVDLENPEKSKVAMVYGQMNEPPGNRLRVALTGLTIAEGFRDE 239
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D L D++ ++ A ++S LL R P + + +L ER
Sbjct: 240 GKDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGQLQER------------ 287
Query: 408 KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSV 467
I + G++T+ + D+T P + D + L ++ + PA++ S
Sbjct: 288 -ITSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDST 346
Query: 468 SR-----VGGAAQYKIVKKLSGDIRIMLAQYREL 496
SR V G Y+ + + G +L +Y+EL
Sbjct: 347 SRQLDPQVVGQEHYETARAVQG----ILQRYKEL 376
>gi|359450298|ref|ZP_09239752.1| F-type H+-transporting ATPase subunit alpha [Pseudoalteromonas sp.
BSi20480]
gi|358043847|dbj|GAA76001.1| F-type H+-transporting ATPase subunit alpha [Pseudoalteromonas sp.
BSi20480]
Length = 466
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 231/402 (57%), Positives = 306/402 (76%), Gaps = 2/402 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ +LT+G K + T +I E+PVG LLGR+VN+ G ID K E VEKI
Sbjct: 26 AVVMGPYADLTEGVKVYTTGRILEVPVGAGLLGRVVNTLGAPIDGKGALDNDGFEPVEKI 85
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG+++R+SV+EP+ TG KSID+MIP+G+GQREL+IGDRQTGKT +AID IINQK+ V
Sbjct: 86 APGVIERQSVDEPVQTGYKSIDAMIPVGRGQRELVIGDRQTGKTALAIDAIINQKDTGVK 145
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV +GQK S++ NV+ KL+ + + T+VV A+A++SAA QY++P++GCT+GEYFRD
Sbjct: 146 CVYVAVGQKASTIANVVRKLEEHGALANTIVVVASASESAALQYLAPFSGCTMGEYFRDR 205
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G++ LI+YDDL+K A AYRQISLLL+RPPGREA+PGDVFYLHSRLLER+S++N ++EK
Sbjct: 206 GENALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLLERASRVNADYVEKF 265
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPA+N G+
Sbjct: 266 TNGEVKGQTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAVNAGI 325
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KIVKKL G IR+ LAQYREL +FS+F+SDLD T+ QL +GE+++ LMK
Sbjct: 326 SVSRVGGAAQTKIVKKLGGGIRLALAQYRELAAFSQFASDLDDATRAQLEHGERVTELMK 385
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKY 567
QK + S+ E+ + L + + I I +I FE ++ Y
Sbjct: 386 QKQYAPMSVAEMSLSLFAAEKGYLKDIEIAKIMDFEAALLSY 427
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 149/331 (45%), Gaps = 29/331 (8%)
Query: 599 TNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSN 658
T G+K V TG+ + PVG LGR++N LG PID KG +++ P+ + P
Sbjct: 36 TEGVK----VYTTGRILEVPVGAGLLGRVVNTLGAPIDGKGALDNDGFEPVEKIAPGVIE 91
Query: 659 QIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIG 718
+ + ++TG K ID + P +G + + G GKT ++ I N C V++
Sbjct: 92 RQSVDEPVQTGYKSIDAMIPVGRGQRELVIGDRQTGKTALAIDAIINQKDTGVKC-VYVA 150
Query: 719 VGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVL 778
VG+++ + +++E L ++ +E + + +G ++ E FR+ G++ L
Sbjct: 151 VGQKASTIANVVRKLEEHGALANTIVVVASASESAALQYLAPFSGCTMGEYFRDRGENAL 210
Query: 779 LFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST------------- 825
+ D++ + +A ++S +L R P Y + +L ER S
Sbjct: 211 IVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLLERASRVNADYVEKFTNGEV 270
Query: 826 --KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQ 883
+ G++T++ I D++ P+ + D I L + GI PA++ S S+
Sbjct: 271 KGQTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAVNAGISVSR- 329
Query: 884 LDPYIVGEEHYKVANE----VKFYLQKYKEL 910
+ G K+ + ++ L +Y+EL
Sbjct: 330 ----VGGAAQTKIVKKLGGGIRLALAQYREL 356
>gi|728921|sp|P41167.1|ATPA_THIFE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|154672|gb|AAA53125.1| F1F0-ATPase alpha subunit [Acidithiobacillus ferrooxidans]
Length = 514
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 224/403 (55%), Positives = 301/403 (74%), Gaps = 2/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + L +G CT ++ ++P+G LLGR+VN+ G+ +D K + + +EKI
Sbjct: 74 AVVLGEFSGLQEGDVVKCTGRVMQVPIGKALLGRVVNALGQPVDGKGAIDAEEFDVLEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR+SV+EP+ TGIKSID+M+PIG+GQRELIIGDRQTGKT +A+D I+NQK K+V
Sbjct: 134 APGVIDRQSVDEPMQTGIKSIDAMVPIGRGQRELIIGDRQTGKTAVAVDAILNQKGKDVQ 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S++ V+ KL+ Y M+YT V+AA A++SAA QY++PY GCT+GEYFRD
Sbjct: 194 CIYVAIGQKASTVAGVVRKLEEYGAMEYTTVIAANASESAAMQYLAPYAGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G + LI+YDDLTK AWAYR ISLLLRRPPGREA+PGDVFYLHSRLLER++++N F+EK
Sbjct: 254 GMNALIVYDDLTKQAWAYRHISLLLRRPPGREAYPGDVFYLHSRLLERAARVNADFVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA PIIET GDV++F+PTNVISITDGQI+L+T+LFN+ RPAIN GL
Sbjct: 314 TKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIYLETDLFNAGIRPAINAGL 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQYREL +F++F+SDLD +T+ Q+ G++++ L+K
Sbjct: 374 SVSRVGGAAQTKIIKKLGGGIRLDLAQYRELAAFAQFASDLDEITRKQIERGKRVTELLK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
Q S+ + L + + + + FE ++ Y
Sbjct: 434 QDQFSPMSVADEGAALFAASSGALDDVEVANVRPFEKALLAYL 476
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 161/354 (45%), Gaps = 30/354 (8%)
Query: 576 NISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPI 635
+++N Q +G + G +G++ +V TG+ + P+G LGR++N LG P+
Sbjct: 62 GLAMNLEQDNVG-----AVVLGEFSGLQEGDVVKCTGRVMQVPIGKALLGRVVNALGQPV 116
Query: 636 DNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGK 695
D KG I++++ + + P ++ + ++TGIK ID + P +G + + G GK
Sbjct: 117 DGKGAIDAEEFDVLEKIAPGVIDRQSVDEPMQTGIKSIDAMVPIGRGQRELIIGDRQTGK 176
Query: 696 TVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGN 755
T ++ I N + C +++ +G+++ +++E ++ ++I +E +
Sbjct: 177 TAVAVDAILNQKGKDVQC-IYVAIGQKASTVAGVVRKLEEYGAMEYTTVIAANASESAAM 235
Query: 756 RLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEM 815
+ G ++ E FR+ G + L+ D++ + A +S +L R P Y +
Sbjct: 236 QYLAPYAGCTMGEYFRDRGMNALIVYDDLTKQAWAYRHISLLLRRPPGREAYPGDVFYLH 295
Query: 816 GKLQERISST---------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIV 860
+L ER + K G++T++ I A D++ P+ + D I
Sbjct: 296 SRLLERAARVNADFVEKFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIY 355
Query: 861 LSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
L + GI PAI+ S S+ + G K+ + ++ L +Y+EL
Sbjct: 356 LETDLFNAGIRPAINAGLSVSR-----VGGAAQTKIIKKLGGGIRLDLAQYREL 404
>gi|335041781|ref|ZP_08534808.1| F0F1-type ATP synthase, alpha subunit [Methylophaga
aminisulfidivorans MP]
gi|333788395|gb|EGL54277.1| F0F1-type ATP synthase, alpha subunit [Methylophaga
aminisulfidivorans MP]
Length = 513
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/400 (57%), Positives = 311/400 (77%), Gaps = 2/400 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ +++++G K CT +I E+P G LLGR+V+S G+ ID K ++ +EK+
Sbjct: 73 AVILGAYQHISEGDKVKCTGRILEVPTGEALLGRVVDSLGKPIDGKGDINAESSSPIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KS+DSMIP+G+GQRELIIGDRQTGKT IAIDTIINQK V
Sbjct: 133 APGVIARQSVDQPIQTGLKSVDSMIPVGRGQRELIIGDRQTGKTAIAIDTIINQKGTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK SS+ NV+ KL+ + +D+T++VAA+A+DSAA Q+I+PY GC++GEYFRD
Sbjct: 193 CIYVAVGQKASSIANVVRKLEEHGALDHTIIVAASASDSAALQFIAPYAGCSMGEYFRDK 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G+D LIIYDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER++++N ++EK+
Sbjct: 253 GEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEKE 312
Query: 408 K--IFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPAIN GL
Sbjct: 313 TNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAINAGL 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQYREL +F++F+SDLD T++Q+ G++++ LMK
Sbjct: 373 SVSRVGGAAQTKIIKKLGGGIRLDLAQYRELAAFAQFASDLDEATRSQINRGQRVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINII 565
QK ++ S+ E+ + L F + + ++ FE ++
Sbjct: 433 QKQYQPLSVAEMAVSLFAANEGFLDDVEVNKVGDFEAALL 472
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 154/342 (45%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I V TG+ + P G+ LGR+++ LG PID KG+IN++ SPI
Sbjct: 71 VGAVILGAYQHISEGDKVKCTGRILEVPTGEALLGRVVDSLGKPIDGKGDINAESSSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K +D + P +G + + G GKT ++ I I
Sbjct: 131 KVAPGVIARQSVDQPIQTGLKSVDSMIPVGRGQRELIIGDRQTGKTAIAIDTI----INQ 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ VG+++ + +++E LD ++ ++ + + G S+
Sbjct: 187 KGTGVKCIYVAVGQKASSIANVVRKLEEHGALDHTIIVAASASDSAALQFIAPYAGCSMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A +VS +L R P Y + +L ER +
Sbjct: 247 EYFRDKGEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNA 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + GI P
Sbjct: 307 DYVEKETNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
AI+ S S+ + G K+ + ++ L +Y+EL
Sbjct: 367 AINAGLSVSR-----VGGAAQTKIIKKLGGGIRLDLAQYREL 403
>gi|32490755|ref|NP_871009.1| F0F1 ATP synthase subunit alpha [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|81741897|sp|Q8D3J5.1|ATPA_WIGBR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|25165961|dbj|BAC24152.1| atpA [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 510
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/403 (57%), Positives = 318/403 (78%), Gaps = 4/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ +L++G K + T +I E+P G LLGR++N+ GE +D+K L +E I
Sbjct: 73 AVVMGSYFHLSEGMKVYSTGRILEVPTGNNLLGRVLNALGEPLDSKGDILHDCFSPIETI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR S+NEPL TG KSIDSM+PIGKGQRELIIGDRQTGK+++AIDTIINQK+ N+
Sbjct: 133 APGVIDRLSINEPLQTGYKSIDSMVPIGKGQRELIIGDRQTGKSSLAIDTIINQKDSNIK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S+++ + KLK ++ + T++V ATA+DSA QY++PY+GCT+GEYFRD
Sbjct: 193 CIYVSIGQKFSTVVKTVEKLKEHDALSNTIIVCATASDSAVLQYLAPYSGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLE-- 405
G+D LI+YDDL+K A AYRQISLLLRRPPGREA+PGD+FYLHSRLLERS+++N+ ++E
Sbjct: 253 GEDSLIVYDDLSKQAIAYRQISLLLRRPPGREAYPGDIFYLHSRLLERSARVNEIYVENF 312
Query: 406 -KKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVG 464
K K+ NK +G+LTA PI+ET GD++SF+PTN+ISITDGQIFL++NLFNS RPAIN G
Sbjct: 313 TKGKVKNK-SGSLTALPIVETQGGDISSFVPTNLISITDGQIFLESNLFNSGIRPAINPG 371
Query: 465 LSVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLM 524
+SVSRVGG+AQ +I++KLSG+IR LAQY EL SF++FSSDLD TK QL +GEKI ++
Sbjct: 372 ISVSRVGGSAQTEIIRKLSGNIRTSLAQYNELSSFAQFSSDLDDSTKKQLQHGEKIIEIL 431
Query: 525 KQKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKY 567
KQK + S+ + ++L ++N++ KI ++E +E +++K+
Sbjct: 432 KQKQYSPMSLSKQALLLFAVQNKYLDKIKSSEVEKYENSLLKH 474
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 146/310 (47%), Gaps = 16/310 (5%)
Query: 588 ENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKS 647
+ IV + G+ + V TG+ + P G+ LGR+LN LG+P+D+KG+I S
Sbjct: 68 KEIVGAVVMGSYFHLSEGMKVYSTGRILEVPTGNNLLGRVLNALGEPLDSKGDILHDCFS 127
Query: 648 PIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIA 707
PI T+ P +++ N L+TG K ID + P KG + + G GK+ ++ I N
Sbjct: 128 PIETIAPGVIDRLSINEPLQTGYKSIDSMVPIGKGQRELIIGDRQTGKSSLAIDTIINQK 187
Query: 708 IEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
+ C +++ +G++ ++KE + L ++ ++ + + +G ++
Sbjct: 188 DSNIKC-IYVSIGQKFSTVVKTVEKLKEHDALSNTIIVCATASDSAVLQYLAPYSGCTMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERIS---- 823
E FR+ G+D L+ D++ + +A ++S +L R P Y + +L ER +
Sbjct: 247 EYFRDRGEDSLIVYDDLSKQAIAYRQISLLLRRPPGREAYPGDIFYLHSRLLERSARVNE 306
Query: 824 -----------STKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K+G++T++ + D++ P+ + D I L + GI P
Sbjct: 307 IYVENFTKGKVKNKSGSLTALPIVETQGGDISSFVPTNLISITDGQIFLESNLFNSGIRP 366
Query: 873 AIDPLESYSK 882
AI+P S S+
Sbjct: 367 AINPGISVSR 376
>gi|149925406|ref|ZP_01913670.1| F0F1 ATP synthase subunit alpha [Limnobacter sp. MED105]
gi|149825523|gb|EDM84731.1| F0F1 ATP synthase subunit alpha [Limnobacter sp. MED105]
Length = 513
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 225/403 (55%), Positives = 307/403 (76%), Gaps = 2/403 (0%)
Query: 169 VLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIA 228
V++ +++++G CT +I E+PVG EL GR+VN+ G ID K K + +EK+A
Sbjct: 74 VILGSYEHISEGDMVKCTGRILEVPVGPELRGRVVNALGVPIDGKGPVNAKMTDVIEKVA 133
Query: 229 PGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVIC 288
PG+++R+SV++PL TG+K+ID+M+P+G+GQRELIIGDRQTGKT +AID IINQK V C
Sbjct: 134 PGVIERKSVDQPLQTGVKAIDAMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGTGVTC 193
Query: 289 IYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLG 348
+YV +GQK SS++NV+ KL+ + ++YT+VV A+A++SAA QY++PY+GCT+GEYFRD G
Sbjct: 194 VYVAVGQKASSIVNVLRKLEEHGALEYTIVVVASASESAAMQYLAPYSGCTMGEYFRDRG 253
Query: 349 QDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK-- 406
+D LI+YDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++EK
Sbjct: 254 EDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNAEYVEKFT 313
Query: 407 KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLS 466
K G+LTA PIIET GDVT+F+PTNVISITDGQIFL+T+LFN+ RPAIN G+S
Sbjct: 314 KGEVKGKTGSLTALPIIETQAGDVTAFVPTNVISITDGQIFLETDLFNAGIRPAINAGIS 373
Query: 467 VSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMKQ 526
VSRVGGAAQ K+VKKLSG IR LAQYREL +F++F+SDLD T+ QL G ++ L+KQ
Sbjct: 374 VSRVGGAAQTKVVKKLSGGIRTDLAQYRELAAFAQFASDLDEATRRQLERGRRVVELLKQ 433
Query: 527 KPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
+ E+ + L I N + + + + FE+++ ++ +
Sbjct: 434 PQYAPLKTWEMALALFAINNGYLDDVEVSNVLPFEVSLRQFMQ 476
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 154/342 (45%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ I +V TG+ + PVG GR++N LG PID KG +N+K I
Sbjct: 71 VGVVILGSYEHISEGDMVKCTGRILEVPVGPELRGRVVNALGVPIDGKGPVNAKMTDVIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + L+TG+K ID + P +G + + G GKT ++ I I
Sbjct: 131 KVAPGVIERKSVDQPLQTGVKAIDAMVPVGRGQRELIIGDRQTGKTAVAIDAI----INQ 186
Query: 711 KGCS---VFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V++ VG+++ + +++E L+ ++ +E + + +G ++
Sbjct: 187 KGTGVTCVYVAVGQKASSIVNVLRKLEEHGALEYTIVVVASASESAAMQYLAPYSGCTMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + +A ++S +L R P Y + +L ER S
Sbjct: 247 EYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNA 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D+T P+ + D I L + GI P
Sbjct: 307 EYVEKFTKGEVKGKTGSLTALPIIETQAGDVTAFVPTNVISITDGQIFLETDLFNAGIRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
AI+ S S+ + G KV + ++ L +Y+EL
Sbjct: 367 AINAGISVSR-----VGGAAQTKVVKKLSGGIRTDLAQYREL 403
>gi|343493295|ref|ZP_08731623.1| F0F1 ATP synthase subunit beta [Vibrio nigripulchritudo ATCC 27043]
gi|342826382|gb|EGU60815.1| F0F1 ATP synthase subunit beta [Vibrio nigripulchritudo ATCC 27043]
Length = 467
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/339 (67%), Positives = 278/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR I G+++G++R V +TG PI PVG TLGRI+NVLGD ID GE
Sbjct: 42 EVQQQLGGGVVRAIVMGSSDGLRRGLTVENTGAPISVPVGTKTLGRIMNVLGDAIDECGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q +LETG+KVIDL+CPF KGGKIGLFGGAGVGKTVNMM
Sbjct: 102 IGAEEHYAIHREAPSYEEQSNETALLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA++H G SVF GVGER+REGNDFYHEM+E+ V++ KV+++YGQMNEP
Sbjct: 162 ELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNVENPEESKVAMVYGQMNEPP 221
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 222 GNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 281
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VL+R IA +G+YPA
Sbjct: 282 EMGVLQERITSTKQGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPA 341
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IDPL+S S+QLDP +VG+EHY +A V+ LQ+YKELKD
Sbjct: 342 IDPLDSTSRQLDPLVVGQEHYDIARGVQSTLQRYKELKD 380
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 146/350 (41%), Gaps = 40/350 (11%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+++ L +G T +PVG + LGRI+N G+ ID + + + +
Sbjct: 54 AIVMGSSDGLRRGLTVENTGAPISVPVGTKTLGRIMNVLGDAIDECGEIGAEEHYAIHRE 113
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP ++ + L TG+K ID + P KG + + G GKT ++ I N +
Sbjct: 114 APSYEEQSNETALLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSG 173
Query: 287 ICIYVCIGQKI------------SSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISP 334
+ ++ +G++ + ++NV N + M Y + +
Sbjct: 174 LSVFAGVGERTREGNDFYHEMQEAGVVNVENPEESKVAMVY-----GQMNEPPGNRLRVA 228
Query: 335 YTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLE 394
TG T+ E FRD G+D L+ D++ ++ A ++S LL R P V Y L E
Sbjct: 229 LTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAE 281
Query: 395 RSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFN 454
+ +++I + G++T+ + D+T P + D + L+ N+
Sbjct: 282 EMGVL------QERITSTKQGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAA 335
Query: 455 SNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESF 499
PAI+ S SR V G Y I + ++ L +Y+EL+
Sbjct: 336 MGLYPAIDPLDSTSRQLDPLVVGQEHYDIARG----VQSTLQRYKELKDI 381
>gi|34500010|gb|AAQ73587.1| ATP synthase beta subunit [Haemophilus parasuis]
Length = 444
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/356 (66%), Positives = 285/356 (80%), Gaps = 1/356 (0%)
Query: 557 IELFEINIIKYFRIINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPIL 616
+E + + K + + ++ +++ +VQQQ+G +VR IA G ++G+KR V +T K I
Sbjct: 16 VEFPQDAVPKVYDALKVETGLTL-EVQQQLGGGVVRCIALGTSDGLKRGLKVENTNKAIE 74
Query: 617 TPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLL 676
PVG TLGRI+NVLG+PID G I +++ IH P + +Q + +LETGIKVIDL+
Sbjct: 75 VPVGTKTLGRIMNVLGEPIDEAGPIGEEERWTIHRAAPSYEDQANSTELLETGIKVIDLI 134
Query: 677 CPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKES 736
PF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVGER+REGNDFYHEMK+S
Sbjct: 135 APFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 194
Query: 737 NVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSA 796
NVLDKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVL F+DNIYR+TLAGTEVSA
Sbjct: 195 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSA 254
Query: 797 MLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLD 856
+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSV + ADDLTDPSP+TTF HLD
Sbjct: 255 LLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVPSGLRSADDLTDPSPATTFAHLD 314
Query: 857 STIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
ST+VLSR IA LGIYPAIDPL S S+QLDP +V +EHY VA V+ LQ+YKELKD
Sbjct: 315 STVVLSRNIASLGIYPAIDPLNSTSRQLDPLVVVQEHYDVARGVQKTLQRYKELKD 370
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 132/295 (44%), Gaps = 14/295 (4%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G K T K E+PVG + LGRI+N GE ID + R T+ + AP D+
Sbjct: 59 GLKRGLKVENTNKAIEVPVGTKTLGRIMNVLGEPIDEAGPIGEEERWTIHRAAPSYEDQA 118
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID + P KG + + G GKT ++ I N + ++ +G
Sbjct: 119 NSTELLETGIKVIDLIAPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 178
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 179 ERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 238
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 239 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 285
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
G++T+ P D+T P + D + L N+ + PAI+ S SR
Sbjct: 286 GSITSVPSGLRSADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAIDPLNSTSR 340
>gi|62318463|dbj|BAD94439.1| beta subunit of F1F0-ATP synthase [Acidithiobacillus ferrooxidans]
Length = 468
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/343 (66%), Positives = 277/343 (80%), Gaps = 1/343 (0%)
Query: 570 IINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILN 629
I+ NN++I +VQ Q+G+ + R IA G + G+KR V TG PI PVG TLGRI+N
Sbjct: 37 IVVDANNLTI-EVQAQLGDGVARGIAMGLSEGLKRGLAVTRTGAPISVPVGHATLGRIMN 95
Query: 630 VLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFG 689
VLG+P+D KG + ++ + IH P F + +LETGIKVIDL+CPF KGGK+GLFG
Sbjct: 96 VLGEPVDGKGPVQTQDRQAIHRPAPAFDELAASTEVLETGIKVIDLVCPFAKGGKVGLFG 155
Query: 690 GAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQM 749
GAGVGKTV MME+IRNIAIEH G SV GVGER+REGNDFYHEM +S VLDKV+L+ GQM
Sbjct: 156 GAGVGKTVFMMEMIRNIAIEHTGYSVCAGVGERTREGNDFYHEMTDSGVLDKVALVNGQM 215
Query: 750 NEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQP 809
NEP NRLR LTGL++A FR+ G+D+L+FIDNI+R+TLAGTEVSA+LGR PSAVGYQP
Sbjct: 216 NEPPRNRLRAGLTGLTMAASFRDEGRDILMFIDNIFRYTLAGTEVSALLGRMPSAVGYQP 275
Query: 810 TLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELG 869
TLAEEMG+LQERI+STK G+ITSVQA+YVPAD LTDPSP+TTF HLD+T+VLSRQIAELG
Sbjct: 276 TLAEEMGQLQERITSTKVGSITSVQAVYVPADYLTDPSPATTFAHLDATVVLSRQIAELG 335
Query: 870 IYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IYPA+DPL+S+S+QLDP IVG+EHY VA + LQ YKEL+D
Sbjct: 336 IYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQPYKELQD 378
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 147/363 (40%), Gaps = 34/363 (9%)
Query: 143 ANNTVLSGQINGTTGYEEAAAQGFVAVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRI 202
ANN + Q G A G + L +G T +PVG LGRI
Sbjct: 41 ANNLTIEVQAQLGDGVARGIAMGLS-------EGLKRGLAVTRTGAPISVPVGHATLGRI 93
Query: 203 VNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELI 262
+N GE +D K ++R+ + + AP + + E L TGIK ID + P KG + +
Sbjct: 94 MNVLGEPVDGKGPVQTQDRQAIHRPAPAFDELAASTEVLETGIKVIDLVCPFAKGGKVGL 153
Query: 263 IGDRQTGKTTIAIDTIIN---QKNKNVICIYVCIGQKISSLINVINKLKYYNCMDYTVVV 319
G GKT ++ I N + +C +G++ + +++ +D +V
Sbjct: 154 FGGAGVGKTVFMMEMIRNIAIEHTGYSVC--AGVGERTREGNDFYHEMTDSGVLDKVALV 211
Query: 320 AATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGRE 379
+ + + TG T+ FRD G+D L+ D++ ++ A ++S LL R
Sbjct: 212 NGQMNEPPRNRLRAGLTGLTMAASFRDEGRDILMFIDNIFRYTLAGTEVSALLGR----- 266
Query: 380 AFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVI 439
P V Y L E ++ +++I + G++T+ + +T P
Sbjct: 267 -MPSAVGY-QPTLAEEMGQL------QERITSTKVGSITSVQAVYVPADYLTDPSPATTF 318
Query: 440 SITDGQIFLDTNLFNSNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYR 494
+ D + L + PA++ S SR + G Y + + + L Y+
Sbjct: 319 AHLDATVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSC----QKTLQPYK 374
Query: 495 ELE 497
EL+
Sbjct: 375 ELQ 377
>gi|209696443|ref|YP_002264374.1| F0F1 ATP synthase subunit beta [Aliivibrio salmonicida LFI1238]
gi|226739970|sp|B6EHG4.1|ATPB_ALISL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
F1 sector subunit beta; AltName: Full=F-ATPase subunit
beta
gi|208010397|emb|CAQ80743.1| ATP synthase beta chain [Aliivibrio salmonicida LFI1238]
Length = 467
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/350 (65%), Positives = 285/350 (81%), Gaps = 8/350 (2%)
Query: 570 IINLKNNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILN 629
+++ K + + +VQQQIG +VR I G+++G++R V +TG PI PVG TLGRI+N
Sbjct: 32 VVDAKERLVL-EVQQQIGGGVVRAIVMGSSDGLRRGLTVENTGAPITVPVGTKTLGRIMN 90
Query: 630 VLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFG 689
VLGD ID GEI +++ IH P + Q + +LETG+KVIDL+CPF KGGKIGLFG
Sbjct: 91 VLGDAIDECGEIGAEEHYSIHRAAPSYEEQANSTELLETGVKVIDLICPFAKGGKIGLFG 150
Query: 690 GAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KV 742
GAGVGKTVNMMELI NIA++H G SVF GVGER+REGNDFY EM+E+ V++ KV
Sbjct: 151 GAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNIEHPEESKV 210
Query: 743 SLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTP 802
+++YGQMNEP GNRLRVALTGL++AE FR+ G+DVLLFIDNIYR+TLAGTEVSA+LGR P
Sbjct: 211 AMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 270
Query: 803 SAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLS 862
SAVGYQPTLAEEMG LQERI+ST++G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VL+
Sbjct: 271 SAVGYQPTLAEEMGVLQERITSTRSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLN 330
Query: 863 RQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
R IA +G+YPAIDPL+S S+QLDP +VG+EHY +A V+ LQ+YKELKD
Sbjct: 331 RNIASMGLYPAIDPLDSTSRQLDPLVVGQEHYDIARNVQSTLQRYKELKD 380
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 150/348 (43%), Gaps = 40/348 (11%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+++ L +G T +PVG + LGRI+N G+ ID + + ++ +
Sbjct: 54 AIVMGSSDGLRRGLTVENTGAPITVPVGTKTLGRIMNVLGDAIDECGEIGAEEHYSIHRA 113
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNV 286
AP ++ + E L TG+K ID + P KG + + G GKT ++ I N +
Sbjct: 114 APSYEEQANSTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSG 173
Query: 287 ICIYVCIGQKI------------SSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISP 334
+ ++ +G++ + ++N+ + + M Y + +
Sbjct: 174 LSVFAGVGERTREGNDFYFEMQEAGVVNIEHPEESKVAMVY-----GQMNEPPGNRLRVA 228
Query: 335 YTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLE 394
TG T+ E FRD G+D L+ D++ ++ A ++S LL R P + L E
Sbjct: 229 LTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY-------QPTLAE 281
Query: 395 RSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFN 454
+ +++I + +G++T+ + D+T P + D + L+ N+ +
Sbjct: 282 EMGVL------QERITSTRSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAS 335
Query: 455 SNYRPAINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
PAI+ S SR V G Y I + +++ L +Y+EL+
Sbjct: 336 MGLYPAIDPLDSTSRQLDPLVVGQEHYDIAR----NVQSTLQRYKELK 379
>gi|338998416|ref|ZP_08637090.1| ATP synthase F1, alpha subunit [Halomonas sp. TD01]
gi|338764733|gb|EGP19691.1| ATP synthase F1, alpha subunit [Halomonas sp. TD01]
Length = 514
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/419 (55%), Positives = 310/419 (73%), Gaps = 5/419 (1%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D L +G CT +I E+PVG EL+GR+V++ G ID K K + VEK+
Sbjct: 74 AVVLGDYLQLQEGMTAQCTGRILEVPVGPELVGRVVDALGNAIDGKGDINAKMTDAVEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV+EP+ TG+KSID+M+PIG+GQRELIIGDRQ GK+ IAID IINQK K V
Sbjct: 134 APGVITRQSVDEPIQTGLKSIDAMVPIGRGQRELIIGDRQIGKSAIAIDAIINQKGKGVT 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ + M++T+VVAA AAD A Q+++ Y+GCT+GEYFRD
Sbjct: 194 CVYVAIGQKQSTIANVVRKLEEHGAMEHTIVVAAGAADPAPMQFLAAYSGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDL+K A AYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 254 GEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+TNLFNS RPAIN GL
Sbjct: 314 TDGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETNLFNSGIRPAINAGL 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G +R+ LAQYREL +FS+F+SDLD T+ QL +G++++ LMK
Sbjct: 374 SVSRVGGAAQTKIIKKLGGGVRLALAQYRELAAFSQFASDLDEATRKQLEHGQRVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIINLKNNISINKVQQ 584
QK + S+ E+ + L + + ++ FE + Y + ++N ++K+ Q
Sbjct: 434 QKQYSPMSVAEMALSLYAANEGHLDDVSVDKVLDFERALHDYMK---SEHNDLLDKINQ 489
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 149/319 (46%), Gaps = 25/319 (7%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + PVG +GR+++ LG+ ID KG+IN+K + + P + + ++TG+
Sbjct: 92 TGRILEVPVGPELVGRVVDALGNAIDGKGDINAKMTDAVEKVAPGVITRQSVDEPIQTGL 151
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFY 730
K ID + P +G + + G +GK+ ++ I N + C V++ +G++ +
Sbjct: 152 KSIDAMVPIGRGQRELIIGDRQIGKSAIAIDAIINQKGKGVTC-VYVAIGQKQSTIANVV 210
Query: 731 HEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLA 790
+++E ++ ++ +P+ + A +G ++ E FR+ G+D L+ D++ + +A
Sbjct: 211 RKLEEHGAMEHTIVVAAGAADPAPMQFLAAYSGCTMGEYFRDRGEDALIVYDDLSKQAVA 270
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST---------------KNGTITSVQA 835
+VS +L R P Y + +L ER + K G++T++
Sbjct: 271 YRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEKFTDGEVKGKTGSLTALPI 330
Query: 836 IYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYK 895
I D++ P+ + D I L + GI PAI+ S S+ + G K
Sbjct: 331 IETQGGDVSAFVPTNVISITDGQIFLETNLFNSGIRPAINAGLSVSR-----VGGAAQTK 385
Query: 896 VANE----VKFYLQKYKEL 910
+ + V+ L +Y+EL
Sbjct: 386 IIKKLGGGVRLALAQYREL 404
>gi|407698233|ref|YP_006823021.1| ATP synthase subunit alpha [Alcanivorax dieselolei B5]
gi|407255571|gb|AFT72678.1| ATP synthase subunit alpha [Alcanivorax dieselolei B5]
Length = 514
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 225/403 (55%), Positives = 301/403 (74%), Gaps = 2/403 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D L +GQK CT +I E+P G ELLGR+V++ G ID K K + VEK+
Sbjct: 74 AVVLGDYLGLAEGQKVRCTGRILEVPTGPELLGRVVDALGNPIDGKGPIDAKQTDAVEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R VNEP+ TG KSID+M+PIG+GQRELIIGDRQ GKT +A+D IINQ++ +
Sbjct: 134 APGVIWRREVNEPVQTGYKSIDAMVPIGRGQRELIIGDRQIGKTAVAVDAIINQRDSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ + MD T++VAA+A+D A+ Q+++ + GCT+GEYFRD
Sbjct: 194 CVYVAIGQKQSTIANVVRKLEEHGAMDNTIIVAASASDPASMQFLAAFAGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++K+N+ ++E+
Sbjct: 254 GEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKVNEEYVEQF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPA+N G+
Sbjct: 314 TNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAMNAGV 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQYREL +F++F+SDLD T+ QL +G+ ++ LMK
Sbjct: 374 SVSRVGGAAQTKIIKKLGGGIRLALAQYRELAAFAQFASDLDDSTREQLEHGQAVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYF 568
Q + I E+ ++L + + + +I FE ++ Y
Sbjct: 434 QNQYSPMQIAEMGVVLYAANEGYLNGMEVDKIGAFEAALLDYM 476
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 154/342 (45%), Gaps = 25/342 (7%)
Query: 588 ENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKS 647
++ V + G+ G+ V TG+ + P G LGR+++ LG+PID KG I++K+
Sbjct: 69 QDSVGAVVLGDYLGLAEGQKVRCTGRILEVPTGPELLGRVVDALGNPIDGKGPIDAKQTD 128
Query: 648 PIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIA 707
+ + P + N ++TG K ID + P +G + + G +GKT ++ I N
Sbjct: 129 AVEKVAPGVIWRREVNEPVQTGYKSIDAMVPIGRGQRELIIGDRQIGKTAVAVDAIINQR 188
Query: 708 IEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
C V++ +G++ + +++E +D ++ ++P+ + A G ++
Sbjct: 189 DSGIKC-VYVAIGQKQSTIANVVRKLEEHGAMDNTIIVAASASDPASMQFLAAFAGCTMG 247
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGY-------QPTLAEEMGKLQE 820
E FR+ G+D L+ D++ + A ++S +L R P Y L E K+ E
Sbjct: 248 EYFRDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKVNE 307
Query: 821 RISST--------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I D++ P+ + D I L + GI P
Sbjct: 308 EYVEQFTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETDLFNSGIRP 367
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
A++ S S+ + G K+ + ++ L +Y+EL
Sbjct: 368 AMNAGVSVSR-----VGGAAQTKIIKKLGGGIRLALAQYREL 404
>gi|377577826|ref|ZP_09806807.1| ATP synthase subunit alpha [Escherichia hermannii NBRC 105704]
gi|377541064|dbj|GAB51972.1| ATP synthase subunit alpha [Escherichia hermannii NBRC 105704]
Length = 513
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/402 (57%), Positives = 301/402 (74%), Gaps = 2/402 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ +L +G K CT +I E+PVG LLGR+VN+ G ID K VE I
Sbjct: 73 AVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPIDGKGPVEHDGFSAVEAI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG+++R+SV++P+ TG KS+D+MIPIG+GQRELIIGDRQTGKT +AID IINQ++ +
Sbjct: 133 APGVIERQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGKTALAIDAIINQRDSGIK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ + + T+VV ATA++SAA QY++PY GC +GEYFRD
Sbjct: 193 CVYVAIGQKASTIANVVRKLEEHGALANTIVVVATASESAALQYLAPYAGCAMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDL+K A AYRQISLLLRRPPGREAFPGDVFYLHSRLLER+S++N ++E
Sbjct: 253 GEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLERASRVNAEYVEAF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA PIIET GDV++F+PTNVISITDGQIFL+TNLFNS RPA+N G+
Sbjct: 313 TKGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETNLFNSGIRPAVNPGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKLSG IR LAQYREL +FS+F+SDLD T+ QL +G+K++ L+K
Sbjct: 373 SVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFSQFASDLDDATRKQLSHGQKVTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKY 567
QK + S+ + ++L + + + + +I FE ++ Y
Sbjct: 433 QKQYAPMSVAQQALVLFAAERGYLEDVELAKIGSFEAALLAY 474
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 143/319 (44%), Gaps = 25/319 (7%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + PVG LGR++N LG PID KG + S + + P + + ++TG
Sbjct: 91 TGRILEVPVGRGLLGRVVNTLGAPIDGKGPVEHDGFSAVEAIAPGVIERQSVDQPVQTGY 150
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFY 730
K +D + P +G + + G GKT ++ I N C V++ +G+++ +
Sbjct: 151 KSVDAMIPIGRGQRELIIGDRQTGKTALAIDAIINQRDSGIKC-VYVAIGQKASTIANVV 209
Query: 731 HEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLA 790
+++E L ++ +E + + G ++ E FR+ G+D L+ D++ + +A
Sbjct: 210 RKLEEHGALANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVA 269
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST---------------KNGTITSVQA 835
++S +L R P + + +L ER S + G++T++
Sbjct: 270 YRQISLLLRRPPGREAFPGDVFYLHSRLLERASRVNAEYVEAFTKGEVKGQTGSLTALPI 329
Query: 836 IYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYK 895
I A D++ P+ + D I L + GI PA++P S S+ + G K
Sbjct: 330 IETQAGDVSAFVPTNVISITDGQIFLETNLFNSGIRPAVNPGISVSR-----VGGAAQTK 384
Query: 896 V----ANEVKFYLQKYKEL 910
+ + ++ L +Y+EL
Sbjct: 385 IIKKLSGGIRTALAQYREL 403
>gi|153834312|ref|ZP_01986979.1| ATP synthase F1, beta subunit [Vibrio harveyi HY01]
gi|148869320|gb|EDL68334.1| ATP synthase F1, beta subunit [Vibrio harveyi HY01]
Length = 467
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/339 (67%), Positives = 280/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR I G+++G++R VV+TG PI PVG TLGRI+NVLGD ID +GE
Sbjct: 42 EVQQQLGGGVVRCIVMGSSDGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q +LETG+KVIDL+CPF KGGKIGLFGGAGVGKTVNMM
Sbjct: 102 IGAEEVYSIHREAPSYEEQSNETALLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA++H G SVF GVGER+REGNDFY+EM+E+ V++ KV+++YGQMNEP
Sbjct: 162 ELINNIALQHSGLSVFAGVGERTREGNDFYYEMQEAGVVNVENPEESKVAMVYGQMNEPP 221
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 222 GNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 281
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VL+R IA +G+YPA
Sbjct: 282 EMGVLQERITSTKQGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPA 341
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IDPL+S S+QLDP +VG+EHY +A V+ LQ+YKELKD
Sbjct: 342 IDPLDSTSRQLDPLVVGQEHYDIARGVQQTLQRYKELKD 380
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 145/341 (42%), Gaps = 40/341 (11%)
Query: 177 LTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRES 236
L +G + T +PVG + LGRI+N G+ ID + + + ++ + AP ++ +
Sbjct: 63 LRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGEIGAEEVYSIHREAPSYEEQSN 122
Query: 237 VNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQ 295
L TG+K ID + P KG + + G GKT ++ I N + + ++ +G+
Sbjct: 123 ETALLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGE 182
Query: 296 KI------------SSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEY 343
+ + ++NV N + M Y + + TG T+ E
Sbjct: 183 RTREGNDFYYEMQEAGVVNVENPEESKVAMVY-----GQMNEPPGNRLRVALTGLTMAER 237
Query: 344 FRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYF 403
FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 238 FRDEGRDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL---- 286
Query: 404 LEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINV 463
+++I + G++T+ + D+T P + D + L+ N+ PAI+
Sbjct: 287 --QERITSTKQGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDP 344
Query: 464 GLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESF 499
S SR V G Y I + ++ L +Y+EL+
Sbjct: 345 LDSTSRQLDPLVVGQEHYDIARG----VQQTLQRYKELKDI 381
>gi|329894812|ref|ZP_08270612.1| ATP synthase beta chain [gamma proteobacterium IMCC3088]
gi|328922706|gb|EGG30040.1| ATP synthase beta chain [gamma proteobacterium IMCC3088]
Length = 465
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/339 (67%), Positives = 277/339 (81%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VR IA G++ G+ R V +T PI PVG TLGRI++VLG+PID KG
Sbjct: 40 EVQQQLGDGVVRAIAMGSSEGVSRGLPVTNTKAPIQVPVGIATLGRIMDVLGNPIDEKGP 99
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I ++++ IH P + + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 100 IGEEERASIHRKAPTYEELAASEELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMM 159
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA EH G SVF GVGER+REGNDFY+EM+ES V+D KV+++YGQMNEP
Sbjct: 160 ELINNIATEHSGLSVFAGVGERTREGNDFYYEMQESKVVDVENFTNSKVAMVYGQMNEPP 219
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE+FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 220 GNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 279
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+ST+ G+ITS+QA+YVPADDLTDPSP+TTF HLDST+VLSR IA GIYPA
Sbjct: 280 EMGVLQERITSTRVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPA 339
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
+DPL+S S+QLDP +VG+EHY A V+ LQ+YKELKD
Sbjct: 340 VDPLDSTSRQLDPLLVGQEHYNAARGVQTVLQRYKELKD 378
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 148/343 (43%), Gaps = 30/343 (8%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
A+ + + +++G T+ ++PVG LGRI++ G ID K + R ++ +
Sbjct: 52 AIAMGSSEGVSRGLPVTNTKAPIQVPVGIATLGRIMDVLGNPIDEKGPIGEEERASIHRK 111
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNV- 286
AP + + E L TGIK ID + P KG + + G GKT ++ I N ++
Sbjct: 112 APTYEELAASEELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIATEHSG 171
Query: 287 ICIYVCIGQKISSLINVINKLKYYNCMDY-------TVVVAATAADSAAEQYISPYTGCT 339
+ ++ +G++ + +++ +D +V + + TG T
Sbjct: 172 LSVFAGVGERTREGNDFYYEMQESKVVDVENFTNSKVAMVYGQMNEPPGNRLRVALTGLT 231
Query: 340 IGEYFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKI 399
+ E FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 232 MAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL 284
Query: 400 NKYFLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRP 459
+++I + G++T+ + D+T P + D + L ++ P
Sbjct: 285 ------QERITSTRVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYP 338
Query: 460 AINVGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
A++ S SR + G Y + ++ +L +Y+EL+
Sbjct: 339 AVDPLDSTSRQLDPLLVGQEHYNAARG----VQTVLQRYKELK 377
>gi|325460091|gb|ADZ14041.1| ATP synthase beta chain [Burkholderia ginsengisoli]
Length = 338
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/316 (72%), Positives = 267/316 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R T+V +TGKPI PVG TLGRI++VLG PID G
Sbjct: 22 EVQQQLGDGVVRTICLGASDGLRRGTVVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGP 81
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
INS IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 82 INSDVVRGIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 141
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 142 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 201
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 202 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 261
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 262 RITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 321
Query: 881 SKQLDPYIVGEEHYKV 896
S+Q+DP ++GEEHY +
Sbjct: 322 SRQIDPNVIGEEHYSI 337
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 122/295 (41%), Gaps = 14/295 (4%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID + + AP +
Sbjct: 42 GLRRGTVVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPINSDVVRGIHQKAPAFDELS 101
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 102 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 161
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 162 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 221
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ +++I +
Sbjct: 222 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKT 268
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 269 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSR 323
>gi|254469066|ref|ZP_05082472.1| ATP synthase F1, alpha subunit [beta proteobacterium KB13]
gi|207087876|gb|EDZ65159.1| ATP synthase F1, alpha subunit [beta proteobacterium KB13]
Length = 513
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 224/400 (56%), Positives = 310/400 (77%), Gaps = 4/400 (1%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D +++++G C CT KI E+PVG EL+GR+V++ G +D K K + +EK+
Sbjct: 73 AVVLGDYEHISEGDTCKCTGKILEVPVGPELVGRVVDALGNPLDGKGPIKSKLTDKIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KS+DSM+PIG+GQRELIIGDRQTGKT +A+D IINQK +++
Sbjct: 133 APGVIARKSVSQPVQTGLKSVDSMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGQDMT 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK S++ NV+ KL+ M+YT VV A+A+DSAA Q+++PY GCT+GEYFRD
Sbjct: 193 CIYVAIGQKASTIANVVRKLEETGAMEYTTVVVASASDSAALQFLAPYAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLE-- 405
G+D LIIYDDL+K A AYRQISLLLRRPPGREA+PGDVFY+HSRLLER++++N+ ++E
Sbjct: 253 GEDSLIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYIHSRLLERAARVNEEYVENF 312
Query: 406 -KKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVG 464
K K+ K G+LTA P+IET GDV++F+PTNVISITDGQIFL+++LFN+ RPAIN G
Sbjct: 313 TKGKVKGK-TGSLTALPVIETAAGDVSAFVPTNVISITDGQIFLESDLFNAGIRPAINAG 371
Query: 465 LSVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLM 524
+SVSRVGGAAQ K++KKL G +R+ LAQYREL +F++F+SDLD T+ QL G + LM
Sbjct: 372 ISVSRVGGAAQTKVIKKLGGGVRLALAQYRELAAFAQFASDLDEATRKQLDRGRMFTELM 431
Query: 525 KQKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINI 564
KQ + S+ ++ + L N +F +P+++I E ++
Sbjct: 432 KQAQYSPLSVSKMAVTLYAANNGYFDDVPVEKILTCESDL 471
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 154/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ I TGK + PVG +GR+++ LG+P+D KG I SK I
Sbjct: 71 VGAVVLGDYEHISEGDTCKCTGKILEVPVGPELVGRVVDALGNPLDGKGPIKSKLTDKIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K +D + P +G + + G GKT ++ I N +
Sbjct: 131 KVAPGVIARKSVSQPVQTGLKSVDSMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGQD 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ + +++E+ ++ +++ ++ + + G ++ E F
Sbjct: 191 MTC-IYVAIGQKASTIANVVRKLEETGAMEYTTVVVASASDSAALQFLAPYAGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + +A ++S +L R P Y + +L ER +
Sbjct: 250 RDRGEDSLIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYIHSRLLERAARVNEEYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 310 ENFTKGKVKGKTGSLTALPVIETAAGDVSAFVPTNVISITDGQIFLESDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G KV + V+ L +Y+EL
Sbjct: 370 AGISVSR-----VGGAAQTKVIKKLGGGVRLALAQYREL 403
>gi|254283924|ref|ZP_04958892.1| ATP synthase F1, alpha subunit [gamma proteobacterium NOR51-B]
gi|219680127|gb|EED36476.1| ATP synthase F1, alpha subunit [gamma proteobacterium NOR51-B]
Length = 514
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 226/402 (56%), Positives = 301/402 (74%), Gaps = 2/402 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D K L +GQ C CT +I E+PVG L GR+V++ G ID K K + +EKI
Sbjct: 74 AVVLGDYKQLAEGQTCRCTGRILEVPVGPALQGRVVDALGNPIDGKGAVDAKETDALEKI 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ G+K+IDSM+PIG+GQRELIIGDRQ GKT IAID IINQKN +
Sbjct: 134 APGVIARQSVDQPVQIGLKAIDSMVPIGRGQRELIIGDRQIGKTAIAIDAIINQKNTGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK SS+ V+ KL+ MD+T+VVAA A+D AA Q+++P+ GCT+GEY+RD
Sbjct: 194 CIYVAVGQKASSVAAVVRKLEENGAMDHTIVVAANASDPAAMQFLAPFAGCTMGEYYRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N ++E
Sbjct: 254 GEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEAF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA P+IET GDV++F+PTNVISITDGQIFL+ ++FN+ RPA+N G+
Sbjct: 314 TNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLEADMFNAGVRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKLSG +R LAQYREL +FS+F+SDLD TK QL +GE+++ LMK
Sbjct: 374 SVSRVGGAAQTKIMKKLSGGVRTALAQYRELAAFSQFASDLDEATKAQLNHGERVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKY 567
QK + S+ E+ ++L + +++I FE ++ +
Sbjct: 434 QKQYSPMSVAEMGLMLYAANEGHLDDVEVEKIGDFESALLSF 475
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 153/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ + TG+ + PVG GR+++ LG+PID KG +++K+ +
Sbjct: 72 VGAVVLGDYKQLAEGQTCRCTGRILEVPVGPALQGRVVDALGNPIDGKGAVDAKETDALE 131
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++ G+K ID + P +G + + G +GKT ++ I N
Sbjct: 132 KIAPGVIARQSVDQPVQIGLKAIDSMVPIGRGQRELIIGDRQIGKTAIAIDAIINQKNTG 191
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ VG+++ +++E+ +D ++ ++P+ + G ++ E +
Sbjct: 192 IKC-IYVAVGQKASSVAAVVRKLEENGAMDHTIVVAANASDPAAMQFLAPFAGCTMGEYY 250
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + +A ++S +L R P Y + +L ER +
Sbjct: 251 RDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYV 310
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + G+ PA++
Sbjct: 311 EAFTNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLEADMFNAGVRPAMN 370
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G K+ + V+ L +Y+EL
Sbjct: 371 AGISVSR-----VGGAAQTKIMKKLSGGVRTALAQYREL 404
>gi|332533716|ref|ZP_08409575.1| ATP synthase alpha chain [Pseudoalteromonas haloplanktis ANT/505]
gi|359453229|ref|ZP_09242552.1| F-type H+-transporting ATPase subunit alpha [Pseudoalteromonas sp.
BSi20495]
gi|414071448|ref|ZP_11407417.1| ATP synthase alpha chain [Pseudoalteromonas sp. Bsw20308]
gi|332036880|gb|EGI73341.1| ATP synthase alpha chain [Pseudoalteromonas haloplanktis ANT/505]
gi|358049728|dbj|GAA78801.1| F-type H+-transporting ATPase subunit alpha [Pseudoalteromonas sp.
BSi20495]
gi|410806168|gb|EKS12165.1| ATP synthase alpha chain [Pseudoalteromonas sp. Bsw20308]
Length = 513
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/402 (58%), Positives = 305/402 (75%), Gaps = 2/402 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ +LT+G K + T +I E+PVG LLGR+VN+ G ID K E VEKI
Sbjct: 73 AVVMGPYADLTEGVKVYTTGRILEVPVGPGLLGRVVNTLGAPIDGKGALDNDGFEPVEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG+++R+SV+EP+ TG KSID+MIP+G+GQRELIIGDRQTGKT +AID IINQK+ V
Sbjct: 133 APGVIERKSVDEPVQTGYKSIDAMIPVGRGQRELIIGDRQTGKTALAIDAIINQKDTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ + + T+VV A+A++SAA QY++P+ GCT+GEYFRD
Sbjct: 193 CVYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQYLAPFAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G++ LI+YDDL+K A AYRQISLLL+RPPGREA+PGDVFYLHSRLLER+S++N ++EK
Sbjct: 253 GENALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLLERASRVNADYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPA+N G+
Sbjct: 313 TNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAVNAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KIVKKL G IR+ LAQYREL +FS+F+SDLD T+ QL +GE+++ LMK
Sbjct: 373 SVSRVGGAAQTKIVKKLGGGIRLALAQYRELAAFSQFASDLDDATRAQLEHGERVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKY 567
QK + S+ E+ + L + F I I +I FE ++ Y
Sbjct: 433 QKQYAPMSVAEMSLSLFAAEKGFLQDIEIAKIGDFEAALLSY 474
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 148/331 (44%), Gaps = 29/331 (8%)
Query: 599 TNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSN 658
T G+K V TG+ + PVG LGR++N LG PID KG +++ P+ + P
Sbjct: 83 TEGVK----VYTTGRILEVPVGPGLLGRVVNTLGAPIDGKGALDNDGFEPVEKIAPGVIE 138
Query: 659 QIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIG 718
+ + ++TG K ID + P +G + + G GKT ++ I N C V++
Sbjct: 139 RKSVDEPVQTGYKSIDAMIPVGRGQRELIIGDRQTGKTALAIDAIINQKDTGVKC-VYVA 197
Query: 719 VGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVL 778
+G+++ + +++E L ++ +E + + G ++ E FR+ G++ L
Sbjct: 198 IGQKASTIANVVRKLEEHGALANTIVVVASASESAALQYLAPFAGCTMGEYFRDRGENAL 257
Query: 779 LFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST------------- 825
+ D++ + +A ++S +L R P Y + +L ER S
Sbjct: 258 IVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLLERASRVNADYVEKFTNGEV 317
Query: 826 --KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQ 883
K G++T++ I D++ P+ + D I L + GI PA++ S S+
Sbjct: 318 KGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAVNAGISVSR- 376
Query: 884 LDPYIVGEEHYKVANE----VKFYLQKYKEL 910
+ G K+ + ++ L +Y+EL
Sbjct: 377 ----VGGAAQTKIVKKLGGGIRLALAQYREL 403
>gi|387130852|ref|YP_006293742.1| ATP synthase subunit alpha [Methylophaga sp. JAM7]
gi|386272141|gb|AFJ03055.1| ATP synthase alpha chain [Methylophaga sp. JAM7]
Length = 513
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/404 (56%), Positives = 311/404 (76%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++T+G K CT +I E+P G +LGR+V+S G+ ID K ++ +EK+
Sbjct: 73 AVVLGNYQHITEGDKVKCTGRILEVPTGEAMLGRVVDSLGKPIDGKGDIKAESSSPIEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KSID+MIP+G+GQRELIIGDRQTGKT IA+DTIINQK V
Sbjct: 133 APGVIARQSVDQPIQTGLKSIDAMIPVGRGQRELIIGDRQTGKTAIAVDTIINQKGTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ NV+ KL+ + +++T++VAA+A+DSAA Q+I+PY GC++GEYFRD
Sbjct: 193 CIYVAIGQKASSIANVVRKLEEHGALEHTIIVAASASDSAALQFIAPYAGCSMGEYFRDK 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LIIYDDLTK AWAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER++++N ++E+
Sbjct: 253 GEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEQV 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPAIN GL
Sbjct: 313 TNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAINAGL 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQYREL +F++F+SDLD T+ Q+ G++++ LMK
Sbjct: 373 SVSRVGGAAQTKIIKKLGGGIRLDLAQYRELAAFAQFASDLDEATRAQISRGQRVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK ++ S+ E+ I L F + + ++ FE ++ R
Sbjct: 433 QKQYQPLSVAEMAISLFSANEGFLDDVDVDKVGSFEAALLANMR 476
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 154/342 (45%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + GN I V TG+ + P G+ LGR+++ LG PID KG+I ++ SPI
Sbjct: 71 VGAVVLGNYQHITEGDKVKCTGRILEVPTGEAMLGRVVDSLGKPIDGKGDIKAESSSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GKT ++ I I
Sbjct: 131 KVAPGVIARQSVDQPIQTGLKSIDAMIPVGRGQRELIIGDRQTGKTAIAVDTI----INQ 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ +G+++ + +++E L+ ++ ++ + + G S+
Sbjct: 187 KGTGVKCIYVAIGQKASSIANVVRKLEEHGALEHTIIVAASASDSAALQFIAPYAGCSMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST-- 825
E FR+ G+D L+ D++ + A +VS +L R P Y + +L ER +
Sbjct: 247 EYFRDKGEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNA 306
Query: 826 -------------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + GI P
Sbjct: 307 DYVEQVTNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
AI+ S S+ + G K+ + ++ L +Y+EL
Sbjct: 367 AINAGLSVSR-----VGGAAQTKIIKKLGGGIRLDLAQYREL 403
>gi|260222686|emb|CBA32492.1| ATP synthase subunit alpha 1 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 517
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 226/404 (55%), Positives = 305/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
+V++ + +++++G CT +I E+PVG EL GR+VN+ G+ ID K K + +EK+
Sbjct: 78 SVILGEYEHISEGDTVKCTGRILEVPVGPELRGRVVNALGQPIDGKGPINAKMTDVIEKV 137
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ RESV++P+ TG+KSIDSM+P+G+GQRELIIGDRQTGKT +AID IINQK +N+
Sbjct: 138 APGVIARESVSQPMQTGLKSIDSMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQNMT 197
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK SS+ NV+ L+ M+YT+VVAATA++SAA QY+S Y+GCT+GEYFRD
Sbjct: 198 CVYVAIGQKASSVKNVVRALEQAGAMEYTIVVAATASESAAMQYVSAYSGCTMGEYFRDR 257
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDL+K A AYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER++++N ++E
Sbjct: 258 GEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEAF 317
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 318 TKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSLFNAGIRPAINAGI 377
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K+VK LSG IR LAQYREL +F++F+SDLD T+ QL G +++ L+K
Sbjct: 378 SVSRVGGAAQTKLVKNLSGGIRTDLAQYRELAAFAQFASDLDEATRKQLDRGARVTELLK 437
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q + +I + L + F I +K++ FE + + +
Sbjct: 438 QAQYSPLTISLMGATLFAVNKGFMDDIEVKKVLAFEHGLHAFLK 481
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 155/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V ++ G I V TG+ + PVG GR++N LG PID KG IN+K I
Sbjct: 76 VGSVILGEYEHISEGDTVKCTGRILEVPVGPELRGRVVNALGQPIDGKGPINAKMTDVIE 135
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GKT ++ I N ++
Sbjct: 136 KVAPGVIARESVSQPMQTGLKSIDSMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQN 195
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C V++ +G+++ + ++++ ++ ++ +E + + A +G ++ E F
Sbjct: 196 MTC-VYVAIGQKASSVKNVVRALEQAGAMEYTIVVAATASESAAMQYVSAYSGCTMGEYF 254
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + +A +VS +L R P Y + +L ER +
Sbjct: 255 RDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYV 314
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I A D++ P+ + D I L + GI PAI+
Sbjct: 315 EAFTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSLFNAGIRPAIN 374
Query: 876 PLESYSKQLDPYIVGEEHYK----VANEVKFYLQKYKEL 910
S S+ + G K ++ ++ L +Y+EL
Sbjct: 375 AGISVSR-----VGGAAQTKLVKNLSGGIRTDLAQYREL 408
>gi|312882261|ref|ZP_07742007.1| F0F1 ATP synthase subunit beta [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370105|gb|EFP97611.1| F0F1 ATP synthase subunit beta [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 467
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/339 (67%), Positives = 279/339 (82%), Gaps = 7/339 (2%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G +VR I G+++G++R VV+TG PI PVG TLGRI+NVLGD ID +GE
Sbjct: 42 EVQQQLGGGVVRCIVMGSSDGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGE 101
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I +++ IH P + Q +LETG+KVIDL+CPF KGGKIGLFGGAGVGKTVNMM
Sbjct: 102 IGAEESYSIHREAPSYEEQSNETALLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMM 161
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLD-------KVSLIYGQMNEPS 753
ELI NIA++H G SVF GVGER+REGNDFY EM+E+ V++ KV+++YGQMNEP
Sbjct: 162 ELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVENPEESKVAMVYGQMNEPP 221
Query: 754 GNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAE 813
GNRLRVALTGL++AE FR+ G+DVLLF+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAE
Sbjct: 222 GNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAE 281
Query: 814 EMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPA 873
EMG LQERI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VL+R IA +G+YPA
Sbjct: 282 EMGVLQERITSTKQGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPA 341
Query: 874 IDPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
IDPL+S S+QLDP +VG+EHY +A V+ LQ+YKELKD
Sbjct: 342 IDPLDSTSRQLDPLVVGQEHYDIARGVQQTLQRYKELKD 380
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 145/342 (42%), Gaps = 40/342 (11%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G + T +PVG + LGRI+N G+ ID + + + ++ + AP ++
Sbjct: 62 GLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGEIGAEESYSIHREAPSYEEQS 121
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ L TG+K ID + P KG + + G GKT ++ I N + + ++ +G
Sbjct: 122 NETALLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVG 181
Query: 295 QKI------------SSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGE 342
++ + ++NV N + M Y + + TG T+ E
Sbjct: 182 ERTREGNDFYFEMQEAGVVNVENPEESKVAMVY-----GQMNEPPGNRLRVALTGLTMAE 236
Query: 343 YFRDLGQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKY 402
FRD G+D L+ D++ ++ A ++S LL R P V Y L E +
Sbjct: 237 RFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL--- 286
Query: 403 FLEKKKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAIN 462
+++I + G++T+ + D+T P + D + L+ N+ PAI+
Sbjct: 287 ---QERITSTKQGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAID 343
Query: 463 VGLSVSR-----VGGAAQYKIVKKLSGDIRIMLAQYRELESF 499
S SR V G Y I + ++ L +Y+EL+
Sbjct: 344 PLDSTSRQLDPLVVGQEHYDIARG----VQQTLQRYKELKDI 381
>gi|398832326|ref|ZP_10590487.1| proton translocating ATP synthase, F1 alpha subunit [Herbaspirillum
sp. YR522]
gi|398223423|gb|EJN09767.1| proton translocating ATP synthase, F1 alpha subunit [Herbaspirillum
sp. YR522]
Length = 513
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 226/404 (55%), Positives = 306/404 (75%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++++G CT +I E+P+G EL GR+VN+ G+ ID K K +EKI
Sbjct: 73 AVILGEYEHISEGDVVKCTGRILEVPIGPELCGRVVNALGQPIDGKGPINTKLTAPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KSIDSM+P+G+GQRELIIGDRQTGK+ +AID IINQK +N+
Sbjct: 133 APGVIARQSVSQPMQTGLKSIDSMVPVGRGQRELIIGDRQTGKSAVAIDAIINQKGQNMT 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ NV+ L+ + M+YT+VVAATA++SAA QY+S Y+GC +GEYFRD
Sbjct: 193 CIYVAIGQKASSIKNVVRALEAHGAMEYTIVVAATASESAAMQYVSAYSGCAMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
GQD LI+YDDL+K A AYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER++++N ++EK
Sbjct: 253 GQDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSLFNAGVRPAINAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++K LSG IR LAQYREL +F++F+SDLD T+ QL G +++ L+K
Sbjct: 373 SVSRVGGAAQTKVIKGLSGGIRTDLAQYRELAAFAQFASDLDEATRKQLDRGARVTELLK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q + SI + + L + F + +K+I FE ++ + +
Sbjct: 433 QAQYSPQSISLMAVSLFAVNKGFMDDVEVKKILAFEAGLLNFVK 476
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 155/339 (45%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I +V TG+ + P+G GR++N LG PID KG IN+K +PI
Sbjct: 71 VGAVILGEYEHISEGDVVKCTGRILEVPIGPELCGRVVNALGQPIDGKGPINTKLTAPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GK+ ++ I N ++
Sbjct: 131 KIAPGVIARQSVSQPMQTGLKSIDSMVPVGRGQRELIIGDRQTGKSAVAIDAIINQKGQN 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C +++ +G+++ + ++ ++ ++ +E + + A +G ++ E F
Sbjct: 191 MTC-IYVAIGQKASSIKNVVRALEAHGAMEYTIVVAATASESAAMQYVSAYSGCAMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + +A +VS +L R P Y + +L ER +
Sbjct: 250 RDRGQDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
+ G++T++ I A D++ P+ + D I L + G+ PAI+
Sbjct: 310 EKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSLFNAGVRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKV----ANEVKFYLQKYKEL 910
S S+ + G KV + ++ L +Y+EL
Sbjct: 370 AGISVSR-----VGGAAQTKVIKGLSGGIRTDLAQYREL 403
>gi|326797430|ref|YP_004315250.1| ATP synthase subunit alpha [Marinomonas mediterranea MMB-1]
gi|326548194|gb|ADZ93414.1| ATP synthase subunit alpha [Marinomonas mediterranea MMB-1]
Length = 514
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/416 (55%), Positives = 306/416 (73%), Gaps = 2/416 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D ++L +GQK CT +I E+PVG ELLGR+V++ G ID K + + VEK+
Sbjct: 74 AVVLGDYQDLVEGQKAKCTGRILEVPVGPELLGRVVDALGNPIDGKGPVNAQMTDAVEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+ V+EP+ TG K+IDSM+PIG+GQRELIIGDRQ GKT +AIDTII QK+ +
Sbjct: 134 APGVIARQGVDEPVQTGYKAIDSMVPIGRGQRELIIGDRQIGKTALAIDTIIAQKSSGIK 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ M+YT VV A AAD A+ Q+++PY+GCTIGEYFRD
Sbjct: 194 CVYVAIGQKQSTIANVVRKLEENGAMEYTTVVVAGAADPASMQFLAPYSGCTIGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++EK
Sbjct: 254 GEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNVEYVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+ FN+ RPA+N G+
Sbjct: 314 TNGEVKGQTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETSSFNAGIRPAMNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKL G IR+ LAQYREL +F++F+SDLD T+ QL +G++++ LMK
Sbjct: 374 SVSRVGGAAQTKIIKKLGGGIRLALAQYRELAAFAQFASDLDEATRKQLEHGKQVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFRIINLKNNISINK 581
Q S+ ++ +IL + + +I FE + Y + + INK
Sbjct: 434 QAQFSPMSVGDMGVILYAANEGYLADVETSKIASFESAFLSYINSEHAEMMEDINK 489
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 148/320 (46%), Gaps = 27/320 (8%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + PVG LGR+++ LG+PID KG +N++ + + P + + ++TG
Sbjct: 92 TGRILEVPVGPELLGRVVDALGNPIDGKGPVNAQMTDAVEKVAPGVIARQGVDEPVQTGY 151
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCS-VFIGVGERSREGNDF 729
K ID + P +G + + G +GKT ++ I IA + G V++ +G++ +
Sbjct: 152 KAIDSMVPIGRGQRELIIGDRQIGKTALAIDTI--IAQKSSGIKCVYVAIGQKQSTIANV 209
Query: 730 YHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTL 789
+++E+ ++ +++ +P+ + +G +I E FR+ G+D L+ D++ +
Sbjct: 210 VRKLEENGAMEYTTVVVAGAADPASMQFLAPYSGCTIGEYFRDRGEDALIVYDDLTKQAW 269
Query: 790 AGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST---------------KNGTITSVQ 834
A ++S +L R P Y + +L ER S + G++T++
Sbjct: 270 AYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNVEYVEKFTNGEVKGQTGSLTALP 329
Query: 835 AIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHY 894
I D++ P+ + D I L GI PA++ S S+ + G
Sbjct: 330 IIETQGGDVSAFVPTNVISITDGQIFLETSSFNAGIRPAMNAGISVSR-----VGGAAQT 384
Query: 895 KVANE----VKFYLQKYKEL 910
K+ + ++ L +Y+EL
Sbjct: 385 KIIKKLGGGIRLALAQYREL 404
>gi|442610541|ref|ZP_21025255.1| ATP synthase alpha chain [Pseudoalteromonas luteoviolacea B = ATCC
29581]
gi|441747873|emb|CCQ11317.1| ATP synthase alpha chain [Pseudoalteromonas luteoviolacea B = ATCC
29581]
Length = 513
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/402 (57%), Positives = 307/402 (76%), Gaps = 2/402 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ +L +G K T +I E+PVG LLGR+VN+ GE ID K E VEKI
Sbjct: 73 AVVMGPYADLKEGVKVQATGRILEVPVGRALLGRVVNTLGEPIDGKGPIANDGFEPVEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG+++R+SV++P+ TG KSID+MIP+G+GQRELIIGDRQTGKT +AID IINQKN V
Sbjct: 133 APGVIERQSVDQPVQTGYKSIDAMIPVGRGQRELIIGDRQTGKTALAIDAIINQKNTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV +GQK S++ NV+ KL+ + + T++V A+A++SAA Q+++P++GCT+GEYFRD
Sbjct: 193 CVYVAVGQKASTIANVVRKLEEHGALANTIIVVASASESAALQFLAPFSGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++N ++EK
Sbjct: 253 GEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNADYVEKY 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPA+N G+
Sbjct: 313 TNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAVNAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KIVKKL G IR+ LAQYREL +FS+F+SDLD T+ QL +GE+++ LMK
Sbjct: 373 SVSRVGGAAQTKIVKKLGGGIRLALAQYRELAAFSQFASDLDDATRAQLEHGERVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKY 567
QK + S+ ++ + L ++ F + I +I FE +++ +
Sbjct: 433 QKQYTPMSVADMSLSLFAVEKGFLKDVKINKIGDFEASLLAF 474
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 150/339 (44%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G +K V TG+ + PVG LGR++N LG+PID KG I + P+
Sbjct: 71 VGAVVMGPYADLKEGVKVQATGRILEVPVGRALLGRVVNTLGEPIDGKGPIANDGFEPVE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG K ID + P +G + + G GKT ++ I N
Sbjct: 131 KIAPGVIERQSVDQPVQTGYKSIDAMIPVGRGQRELIIGDRQTGKTALAIDAIINQKNTG 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C V++ VG+++ + +++E L ++ +E + + +G ++ E F
Sbjct: 191 VKC-VYVAVGQKASTIANVVRKLEEHGALANTIIVVASASESAALQFLAPFSGCTMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST----- 825
R+ G+D L+ D++ + +A ++S +L R P Y + +L ER S
Sbjct: 250 RDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNADYV 309
Query: 826 ----------KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
K G++T++ I D++ P+ + D I L + GI PA++
Sbjct: 310 EKYTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAVN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S S+ + G K+ + ++ L +Y+EL
Sbjct: 370 AGISVSR-----VGGAAQTKIVKKLGGGIRLALAQYREL 403
>gi|422348899|ref|ZP_16429791.1| ATP synthase subunit alpha 1 [Sutterella wadsworthensis 2_1_59BFAA]
gi|404658951|gb|EKB31813.1| ATP synthase subunit alpha 1 [Sutterella wadsworthensis 2_1_59BFAA]
Length = 513
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/405 (56%), Positives = 308/405 (76%), Gaps = 4/405 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ +++++G T KI +PVG EL+GR+VN+ G+ ID K + + VEK+
Sbjct: 73 AVILGSYEHISEGDLVKTTGKILSVPVGPELIGRVVNALGQPIDGKGPINTELFDVVEKV 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++DR+SV++P+ TG+KS+DSMIPIG+GQRELIIGDRQ GKT +AIDTIINQK KN+
Sbjct: 133 APGVIDRQSVSQPVQTGLKSVDSMIPIGRGQRELIIGDRQCGKTAVAIDTIINQKGKNLT 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ M+YT+VVAATA++SAA QYI+PY G T+GEYFRD
Sbjct: 193 CVYVAIGQKASTIANVVRKLEESGAMEYTIVVAATASESAAMQYIAPYAGATMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDLTK AWAYRQISLLLRRPPGREA+PGDVFYLHSRLLER++++N ++E+
Sbjct: 253 GEDSLIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNPVYVERF 312
Query: 407 --KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVG 464
K+ K G++TA PIIET GDVT+F+PTNVISITDGQIFL+T+LFN+ RPAIN G
Sbjct: 313 TEGKVTGK-TGSMTALPIIETQAGDVTAFVPTNVISITDGQIFLETDLFNAGIRPAINPG 371
Query: 465 LSVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLM 524
+SVSRVGGAAQ KI+KKL G +R+ LAQYREL +F++F+SDLD VT+ QL G ++ LM
Sbjct: 372 ISVSRVGGAAQTKIIKKLGGGVRLALAQYRELAAFAQFASDLDDVTRKQLERGRVVTELM 431
Query: 525 KQKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
KQ ++ + E ++L + + + + E + +Y +
Sbjct: 432 KQPQYQPLQVWEEALVLYAVNMGAYDDVAVADALRVERGMREYLK 476
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 158/339 (46%), Gaps = 25/339 (7%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G+ I +V TGK + PVG +GR++N LG PID KG IN++ +
Sbjct: 71 VGAVILGSYEHISEGDLVKTTGKILSVPVGPELIGRVVNALGQPIDGKGPINTELFDVVE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P ++ + ++TG+K +D + P +G + + G GKT ++ I N ++
Sbjct: 131 KVAPGVIDRQSVSQPVQTGLKSVDSMIPIGRGQRELIIGDRQCGKTAVAIDTIINQKGKN 190
Query: 711 KGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEF 770
C V++ +G+++ + +++ES ++ ++ +E + + G ++ E F
Sbjct: 191 LTC-VYVAIGQKASTIANVVRKLEESGAMEYTIVVAATASESAAMQYIAPYAGATMGEYF 249
Query: 771 RNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERIS------- 823
R+ G+D L+ D++ + A ++S +L R P Y + +L ER +
Sbjct: 250 RDRGEDSLIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNPVYV 309
Query: 824 --------STKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAID 875
+ K G++T++ I A D+T P+ + D I L + GI PAI+
Sbjct: 310 ERFTEGKVTGKTGSMTALPIIETQAGDVTAFVPTNVISITDGQIFLETDLFNAGIRPAIN 369
Query: 876 PLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
P S S+ + G K+ + V+ L +Y+EL
Sbjct: 370 PGISVSR-----VGGAAQTKIIKKLGGGVRLALAQYREL 403
>gi|119471629|ref|ZP_01614014.1| F0F1 ATP synthase subunit alpha [Alteromonadales bacterium TW-7]
gi|392540082|ref|ZP_10287219.1| F0F1 ATP synthase subunit alpha [Pseudoalteromonas marina mano4]
gi|119445408|gb|EAW26695.1| F0F1 ATP synthase subunit alpha [Alteromonadales bacterium TW-7]
Length = 513
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 231/402 (57%), Positives = 306/402 (76%), Gaps = 2/402 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ +LT+G K + T +I E+PVG LLGR+VN+ G ID K E VEKI
Sbjct: 73 AVVMGPYADLTEGVKVYTTGRILEVPVGAGLLGRVVNTLGAPIDGKGALDNDGFEPVEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG+++R+SV+EP+ TG KSID+MIP+G+GQREL+IGDRQTGKT +AID IINQK+ V
Sbjct: 133 APGVIERQSVDEPVQTGYKSIDAMIPVGRGQRELVIGDRQTGKTALAIDAIINQKDTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV +GQK S++ NV+ KL+ + + T+VV A+A++SAA QY++P++GCT+GEYFRD
Sbjct: 193 CVYVAVGQKASTIANVVRKLEEHGALANTIVVVASASESAALQYLAPFSGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G++ LI+YDDL+K A AYRQISLLL+RPPGREA+PGDVFYLHSRLLER+S++N ++EK
Sbjct: 253 GENALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLLERASRVNADYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPA+N G+
Sbjct: 313 TNGEVKGQTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAVNAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KIVKKL G IR+ LAQYREL +FS+F+SDLD T+ QL +GE+++ LMK
Sbjct: 373 SVSRVGGAAQTKIVKKLGGGIRLALAQYRELAAFSQFASDLDDATRAQLEHGERVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKY 567
QK + S+ E+ + L + + I I +I FE ++ Y
Sbjct: 433 QKQYAPMSVAEMSLSLFAAEKGYLKDIEIAKIMDFEAALLSY 474
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 149/331 (45%), Gaps = 29/331 (8%)
Query: 599 TNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSN 658
T G+K V TG+ + PVG LGR++N LG PID KG +++ P+ + P
Sbjct: 83 TEGVK----VYTTGRILEVPVGAGLLGRVVNTLGAPIDGKGALDNDGFEPVEKIAPGVIE 138
Query: 659 QIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIG 718
+ + ++TG K ID + P +G + + G GKT ++ I N C V++
Sbjct: 139 RQSVDEPVQTGYKSIDAMIPVGRGQRELVIGDRQTGKTALAIDAIINQKDTGVKC-VYVA 197
Query: 719 VGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVL 778
VG+++ + +++E L ++ +E + + +G ++ E FR+ G++ L
Sbjct: 198 VGQKASTIANVVRKLEEHGALANTIVVVASASESAALQYLAPFSGCTMGEYFRDRGENAL 257
Query: 779 LFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST------------- 825
+ D++ + +A ++S +L R P Y + +L ER S
Sbjct: 258 IVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLLERASRVNADYVEKFTNGEV 317
Query: 826 --KNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQ 883
+ G++T++ I D++ P+ + D I L + GI PA++ S S+
Sbjct: 318 KGQTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAVNAGISVSR- 376
Query: 884 LDPYIVGEEHYKVANE----VKFYLQKYKEL 910
+ G K+ + ++ L +Y+EL
Sbjct: 377 ----VGGAAQTKIVKKLGGGIRLALAQYREL 403
>gi|325460094|gb|ADZ14042.1| ATP synthase beta chain [Burkholderia kururiensis]
Length = 334
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 227/316 (71%), Positives = 267/316 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R +V +TG PI PVG TLGRI++VLG PID G
Sbjct: 19 EVQQQLGDGVVRTICLGASDGLRRGIMVKNTGHPISVPVGKPTLGRIMDVLGRPIDEAGP 78
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S+ K IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 79 IESEHKRSIHQKAPAFDELAPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 138
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 139 ELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 198
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G+DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 199 LTGLTMAEHFRDEGRDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 258
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 259 RITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 318
Query: 881 SKQLDPYIVGEEHYKV 896
S+Q+DP ++GEEHY +
Sbjct: 319 SRQIDPNVIGEEHYTI 334
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 14/279 (5%)
Query: 192 IPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRESVNEPLLTGIKSIDSM 251
+PVG LGRI++ G ID +++ ++ + AP + E L TGIK ID +
Sbjct: 55 VPVGKPTLGRIMDVLGRPIDEAGPIESEHKRSIHQKAPAFDELAPSTELLETGIKVIDLI 114
Query: 252 IPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIGQKISSLINVINKLKYY 310
P KG + + G GKT ++ I N K ++ +G++ + +++K
Sbjct: 115 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDS 174
Query: 311 NCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLIIYDDLTKHAWAYRQISL 370
N +D +V + + TG T+ E+FRD G+D L D++ + A ++S
Sbjct: 175 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGRDVLFFVDNIYRFTLAGTEVSA 234
Query: 371 LLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNNGTLTAFPIIETLEGDV 430
LL R P V Y L E K+ +++I + G++T+ + D+
Sbjct: 235 LLGR------MPSAVGY-QPTLAEEMGKL------QERITSTKTGSITSVQAVYVPADDL 281
Query: 431 TSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
T P D + L ++ + PA++ S SR
Sbjct: 282 TDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSR 320
>gi|417344887|ref|ZP_12125133.1| ATP synthase subunit B, partial [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
gi|417514588|ref|ZP_12178353.1| ATP synthase subunit B, partial [Salmonella enterica subsp.
enterica serovar Senftenberg str. A4-543]
gi|353633400|gb|EHC80216.1| ATP synthase subunit B, partial [Salmonella enterica subsp.
enterica serovar Senftenberg str. A4-543]
gi|357953625|gb|EHJ80107.1| ATP synthase subunit B, partial [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
Length = 399
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 226/312 (72%), Positives = 265/312 (84%)
Query: 601 GIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQI 660
G++R V D PI PVG TLGRI+NVLG+P+D KGEI +++ IH P +
Sbjct: 1 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 60
Query: 661 FNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVG 720
+ +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMMELIRNIAIEH G SVF GVG
Sbjct: 61 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 120
Query: 721 ERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLF 780
ER+REGNDFYHEM +SNV+DKVSL+YGQMNEP GNRLRVALTGL++AE+FR+ G+DVLLF
Sbjct: 121 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 180
Query: 781 IDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTKNGTITSVQAIYVPA 840
+DNIYR+TLAGTEVSA+LGR PSAVGYQPTLAEEMG LQERI+STK G+ITSVQA+YVPA
Sbjct: 181 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPA 240
Query: 841 DDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKVANEV 900
DDLTDPSP+TTF HLD+T+VLSRQIA LGIYPA+DPL+S S+QLDP +VG+EHY A V
Sbjct: 241 DDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGV 300
Query: 901 KFYLQKYKELKD 912
+ LQ+Y+ELKD
Sbjct: 301 QSILQRYQELKD 312
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 142/328 (43%), Gaps = 23/328 (7%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G E E+PVG LGRI+N GE +D K + + R + + AP +
Sbjct: 1 GLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELS 60
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
+ E L TGIK ID M P KG + + G GKT ++ I N + ++ +G
Sbjct: 61 NSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 120
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++ N +D +V + + TG T+ E FRD G+D L+
Sbjct: 121 ERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 180
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ ++ A ++S LL R P V Y L E + +++I +
Sbjct: 181 VDNIYRYTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGVL------QERITSTKT 227
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P + D + L + + PA++ S SR
Sbjct: 228 GSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPL 287
Query: 470 VGGAAQYKIVKKLSGDIRIMLAQYRELE 497
V G Y + ++ +L +Y+EL+
Sbjct: 288 VVGQEHYDTARG----VQSILQRYQELK 311
>gi|77361906|ref|YP_341481.1| F0F1 ATP synthase subunit alpha [Pseudoalteromonas haloplanktis
TAC125]
gi|115312266|sp|Q3IK48.1|ATPA_PSEHT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|76876817|emb|CAI88039.1| membrane-bound ATP synthase, F1 sector, alpha-subunit
[Pseudoalteromonas haloplanktis TAC125]
Length = 513
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/402 (58%), Positives = 304/402 (75%), Gaps = 2/402 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ +LT+G K + T +I E+PVG LLGR+VN+ G ID K E VEKI
Sbjct: 73 AVVMGPYADLTEGVKVYTTGRILEVPVGPGLLGRVVNTLGAPIDGKGALDNDGFEPVEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG+++R+SV+EP+ TG KSID+MIP+G+GQRELIIGDRQTGKT +AID IINQK V
Sbjct: 133 APGVIERKSVDEPVQTGYKSIDAMIPVGRGQRELIIGDRQTGKTALAIDAIINQKGTGVK 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ + + T+VV A+A++SAA QY++P+ GCT+GEYFRD
Sbjct: 193 CVYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQYLAPFAGCTMGEYFRDR 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G++ LI+YDDL+K A AYRQISLLL+RPPGREA+PGDVFYLHSRLLER+S++N ++EK
Sbjct: 253 GENALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLLERASRVNAEYVEKF 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPA+N G+
Sbjct: 313 TNGEVKGTTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAVNAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KIVKKL G IR+ LAQYREL +FS+F+SDLD T+ QL +GE+++ LMK
Sbjct: 373 SVSRVGGAAQTKIVKKLGGGIRLALAQYRELAAFSQFASDLDDATRAQLEHGERVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKY 567
QK + S+ E+ + L + F I I +I FE ++ Y
Sbjct: 433 QKQYAPMSVAEMSLSLFAAEKGFLQDIEIAKIMDFEAALLSY 474
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 148/334 (44%), Gaps = 35/334 (10%)
Query: 599 TNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSN 658
T G+K V TG+ + PVG LGR++N LG PID KG +++ P+ + P
Sbjct: 83 TEGVK----VYTTGRILEVPVGPGLLGRVVNTLGAPIDGKGALDNDGFEPVEKIAPGVIE 138
Query: 659 QIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCS---V 715
+ + ++TG K ID + P +G + + G GKT ++ I I KG V
Sbjct: 139 RKSVDEPVQTGYKSIDAMIPVGRGQRELIIGDRQTGKTALAIDAI----INQKGTGVKCV 194
Query: 716 FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGK 775
++ +G+++ + +++E L ++ +E + + G ++ E FR+ G+
Sbjct: 195 YVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQYLAPFAGCTMGEYFRDRGE 254
Query: 776 DVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISSTK--------- 826
+ L+ D++ + +A ++S +L R P Y + +L ER S
Sbjct: 255 NALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLLERASRVNAEYVEKFTN 314
Query: 827 ------NGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
G++T++ I D++ P+ + D I L + GI PA++ S
Sbjct: 315 GEVKGTTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAVNAGISV 374
Query: 881 SKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
S+ + G K+ + ++ L +Y+EL
Sbjct: 375 SR-----VGGAAQTKIVKKLGGGIRLALAQYREL 403
>gi|92115401|ref|YP_575329.1| ATP synthase F1 subunit alpha [Chromohalobacter salexigens DSM
3043]
gi|119367951|sp|Q1QSC8.1|ATPA_CHRSD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
synthase F1 sector subunit alpha; AltName: Full=F-ATPase
subunit alpha
gi|91798491|gb|ABE60630.1| ATP synthase F1, alpha subunit [Chromohalobacter salexigens DSM
3043]
Length = 514
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/404 (56%), Positives = 302/404 (74%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ D L +G CT +I E+PVG EL+GR+V+ G ID K + K + VEK+
Sbjct: 74 AVVLGDYLQLEEGMTAQCTGRILEVPVGPELIGRVVDPLGVPIDGKGELDTKLTDAVEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV+EP+ TG+KSID+M+PIG+GQRELIIGDRQ GK+ IAIDTIINQK K V
Sbjct: 134 APGVITRQSVDEPIQTGLKSIDAMVPIGRGQRELIIGDRQIGKSAIAIDTIINQKGKGVT 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ + M++T+VVAA AAD A Q+++ Y+GCT+GEYFRD
Sbjct: 194 CVYVAIGQKQSTIANVVRKLEEHGAMEHTIVVAAGAADPAPMQFLAAYSGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDL+K A AYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER++++N +EK
Sbjct: 254 GEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADHVEKL 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+TNLFNS RPAIN GL
Sbjct: 314 TNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETNLFNSGVRPAINAGL 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGG+AQ KI+KKL G +R+ LAQYREL +FS+F+SDLD T+ QL +G++++ LMK
Sbjct: 374 SVSRVGGSAQTKIIKKLGGSVRLALAQYRELAAFSQFASDLDEATRKQLEHGQRVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
Q + S+ E+ + L F + + ++ FE + Y +
Sbjct: 434 QNQYSPLSVAEMAVSLYAANEGFLDDVEVSKVLDFERALHAYMK 477
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 148/319 (46%), Gaps = 25/319 (7%)
Query: 611 TGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGI 670
TG+ + PVG +GR+++ LG PID KGE+++K + + P + + ++TG+
Sbjct: 92 TGRILEVPVGPELIGRVVDPLGVPIDGKGELDTKLTDAVEKVAPGVITRQSVDEPIQTGL 151
Query: 671 KVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFY 730
K ID + P +G + + G +GK+ ++ I N + C V++ +G++ +
Sbjct: 152 KSIDAMVPIGRGQRELIIGDRQIGKSAIAIDTIINQKGKGVTC-VYVAIGQKQSTIANVV 210
Query: 731 HEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLA 790
+++E ++ ++ +P+ + A +G ++ E FR+ G+D L+ D++ + +A
Sbjct: 211 RKLEEHGAMEHTIVVAAGAADPAPMQFLAAYSGCTMGEYFRDRGEDALIVYDDLSKQAVA 270
Query: 791 GTEVSAMLGRTPSAVGYQPTLAEEMGKLQERISST---------------KNGTITSVQA 835
+VS +L R P Y + +L ER + K G++T++
Sbjct: 271 YRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADHVEKLTNGEVKGKTGSLTALPI 330
Query: 836 IYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYK 895
I D++ P+ + D I L + G+ PAI+ S S+ + G K
Sbjct: 331 IETQGGDVSAFVPTNVISITDGQIFLETNLFNSGVRPAINAGLSVSR-----VGGSAQTK 385
Query: 896 V----ANEVKFYLQKYKEL 910
+ V+ L +Y+EL
Sbjct: 386 IIKKLGGSVRLALAQYREL 404
>gi|429210953|ref|ZP_19202119.1| F0F1 ATP synthase subunit alpha [Pseudomonas sp. M1]
gi|428158367|gb|EKX04914.1| F0F1 ATP synthase subunit alpha [Pseudomonas sp. M1]
Length = 514
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 227/404 (56%), Positives = 308/404 (76%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + ++L +G CT +I E+PVG ELLGR+V++ G ID K K + VEK+
Sbjct: 74 AVVLGEYQDLKEGMNAKCTGRILEVPVGPELLGRVVDALGNPIDGKGPIDAKLTDAVEKV 133
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG KS+D+MIP+G+GQRELIIGDRQ GKT +A+D IINQK+ +
Sbjct: 134 APGVIWRKSVDQPVQTGYKSVDAMIPVGRGQRELIIGDRQIGKTALAVDAIINQKDSGIR 193
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
C+YV IGQK S++ NV+ KL+ + T+VV A+A++SAA QY++PY+GCT+GEYFRD
Sbjct: 194 CVYVAIGQKQSTIANVVRKLEENGALANTIVVVASASESAALQYLAPYSGCTMGEYFRDR 253
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S++++ ++EK
Sbjct: 254 GEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVSEEYVEKF 313
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
G+LTA PIIET GDV++F+PTNVISITDGQIFL+T++FNS RPA+N G+
Sbjct: 314 TNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSMFNSGIRPAVNAGI 373
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ KI+KKLSG IR LAQYREL +F++F+SDLD T+ QL +G++++ LMK
Sbjct: 374 SVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFAQFASDLDDATRKQLEHGQRVTELMK 433
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK + SI E+ + L + F + I ++ FE +I YF+
Sbjct: 434 QKQYAPMSIAEMSLALYAAERGFLQDVEIAKVGAFEQALIAYFQ 477
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 167/376 (44%), Gaps = 33/376 (8%)
Query: 557 IELFEINIIKYFRIINLKNNI---SINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGK 613
+ +F + + Y +I + ++N Q +G + G +K TG+
Sbjct: 40 VRIFGLADVMYGEMIEFPGGVYGMALNLEQDSVG-----AVVLGEYQDLKEGMNAKCTGR 94
Query: 614 PILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVI 673
+ PVG LGR+++ LG+PID KG I++K + + P + + ++TG K +
Sbjct: 95 ILEVPVGPELLGRVVDALGNPIDGKGPIDAKLTDAVEKVAPGVIWRKSVDQPVQTGYKSV 154
Query: 674 DLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEM 733
D + P +G + + G +GKT ++ I N C V++ +G++ + ++
Sbjct: 155 DAMIPVGRGQRELIIGDRQIGKTALAVDAIINQKDSGIRC-VYVAIGQKQSTIANVVRKL 213
Query: 734 KESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTE 793
+E+ L ++ +E + + +G ++ E FR+ G+D L+ D++ + +A +
Sbjct: 214 EENGALANTIVVVASASESAALQYLAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQ 273
Query: 794 VSAMLGRTPSAVGYQPTLAEEMGKLQERIS---------------STKNGTITSVQAIYV 838
+S +L R P Y + +L ER S + K G++T++ I
Sbjct: 274 ISLLLRRPPGREAYPGDVFYLHSRLLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIET 333
Query: 839 PADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGEEHYKV-- 896
A D++ P+ + D I L + GI PA++ S S+ + G K+
Sbjct: 334 QAGDVSAFVPTNVISITDGQIFLETSMFNSGIRPAVNAGISVSR-----VGGAAQTKIIK 388
Query: 897 --ANEVKFYLQKYKEL 910
+ ++ L +Y+EL
Sbjct: 389 KLSGGIRTALAQYREL 404
>gi|397904203|ref|ZP_10505124.1| ATP synthase beta chain [Caloramator australicus RC3]
gi|343178950|emb|CCC58023.1| ATP synthase beta chain [Caloramator australicus RC3]
Length = 460
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 231/338 (68%), Positives = 277/338 (81%)
Query: 575 NNISINKVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDP 634
+ I +++V Q +G+ IVRT+A +T+G+ R +DTG PI PVG+ TLGR+ NVLG P
Sbjct: 36 DKILVSEVMQHLGDEIVRTVAMDSTDGLVRGMEAIDTGAPIKVPVGEETLGRLFNVLGQP 95
Query: 635 IDNKGEINSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVG 694
IDNKGE+N+K+ PIH PKF Q I ETGIKVIDL+CP+ KGGKIGLFGGAGVG
Sbjct: 96 IDNKGEVNAKEFYPIHRPAPKFEEQAVEPEIFETGIKVIDLICPYQKGGKIGLFGGAGVG 155
Query: 695 KTVNMMELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSG 754
KTV + ELI NIA EH G SVF GVGER+REGND Y++M+ES VLDK L++GQMNEP G
Sbjct: 156 KTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYDMQESGVLDKTVLVFGQMNEPPG 215
Query: 755 NRLRVALTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEE 814
R+RVALTGL++AE FR++G DVLLFIDNI+RF+ AG+EVSA+LGR PSAVGYQPTLA E
Sbjct: 216 ARMRVALTGLTMAEYFRDNGNDVLLFIDNIFRFSQAGSEVSALLGRIPSAVGYQPTLANE 275
Query: 815 MGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAI 874
MG LQERI+STKNG+ITSVQA+YVPADDLTDP+P+TTFTHLD+ VLSR IAELGIYPA+
Sbjct: 276 MGALQERITSTKNGSITSVQAVYVPADDLTDPAPATTFTHLDAMTVLSRSIAELGIYPAV 335
Query: 875 DPLESYSKQLDPYIVGEEHYKVANEVKFYLQKYKELKD 912
DPLES S+ LDP IVG+EHY+VA VK LQ+YKEL+D
Sbjct: 336 DPLESSSRILDPRIVGQEHYEVAQRVKSILQRYKELQD 373
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 151/336 (44%), Gaps = 23/336 (6%)
Query: 169 VLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIA 228
V +D L +G + T ++PVG E LGR+ N G+ IDNK + K + + A
Sbjct: 55 VAMDSTDGLVRGMEAIDTGAPIKVPVGEETLGRLFNVLGQPIDNKGEVNAKEFYPIHRPA 114
Query: 229 PGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVI 287
P ++ E TGIK ID + P KG + + G GKT + + I N K +
Sbjct: 115 PKFEEQAVEPEIFETGIKVIDLICPYQKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGL 174
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
++ +G++ ++ ++ +D TV+V + + TG T+ EYFRD
Sbjct: 175 SVFTGVGERTREGNDLYYDMQESGVLDKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDN 234
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKK 407
G D L+ D++ + + A ++S LL R P V Y + + N+ ++
Sbjct: 235 GNDVLLFIDNIFRFSQAGSEVSALLGR------IPSAVGY-------QPTLANEMGALQE 281
Query: 408 KIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSV 467
+I + NG++T+ + D+T P + D L ++ PA++ S
Sbjct: 282 RITSTKNGSITSVQAVYVPADDLTDPAPATTFTHLDAMTVLSRSIAELGIYPAVDPLESS 341
Query: 468 S-----RVGGAAQYKIVKKLSGDIRIMLAQYRELES 498
S R+ G Y++ ++ ++ +L +Y+EL+
Sbjct: 342 SRILDPRIVGQEHYEVAQR----VKSILQRYKELQD 373
>gi|325460060|gb|ADZ14028.1| ATP synthase beta chain [Burkholderia andropogonis]
Length = 338
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 224/316 (70%), Positives = 268/316 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G+ +G++R + +TGKPI PVG TLGRI++VLG PID G
Sbjct: 22 EVQQQLGDGVVRTICLGSADGLRRGLAIKNTGKPITVPVGAATLGRIMDVLGRPIDEAGP 81
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I+ + IH L P F + +LETGIKVIDL+CPF+KGGK+GLFGGAGVGKTVNMM
Sbjct: 82 ISHEFTREIHQLAPAFDELAPSTELLETGIKVIDLICPFVKGGKVGLFGGAGVGKTVNMM 141
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA H G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 142 ELINNIAKAHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 201
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE+FR+ G+DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMG+LQE
Sbjct: 202 LTGLTMAEQFRDEGRDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 261
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 262 RITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 321
Query: 881 SKQLDPYIVGEEHYKV 896
S+Q+DP ++GEEHY +
Sbjct: 322 SRQIDPLVIGEEHYSI 337
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 121/295 (41%), Gaps = 14/295 (4%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID + + ++AP +
Sbjct: 42 GLRRGLAIKNTGKPITVPVGAATLGRIMDVLGRPIDEAGPISHEFTREIHQLAPAFDELA 101
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 102 PSTELLETGIKVIDLICPFVKGGKVGLFGGAGVGKTVNMMELINNIAKAHGGYSVFAGVG 161
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E FRD G+D L
Sbjct: 162 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEQFRDEGRDVLFF 221
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P + + RL ER I +
Sbjct: 222 VDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQER-------------ITSTKK 268
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 269 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSR 323
>gi|333375752|ref|ZP_08467553.1| ATP synthase F1 sector alpha subunit [Kingella kingae ATCC 23330]
gi|332969725|gb|EGK08739.1| ATP synthase F1 sector alpha subunit [Kingella kingae ATCC 23330]
Length = 515
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/405 (57%), Positives = 311/405 (76%), Gaps = 4/405 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++ +G + CT +I E+P+G EL+GR+VN+ G+ ID K +EKI
Sbjct: 73 AVVLGEYEHIKEGDEVKCTGRILEVPIGRELVGRVVNALGQPIDGKGPINAAKTAPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+K+IDSM+P+G+GQRELIIGDRQTGKT +A+D I+NQK V+
Sbjct: 133 APGVIARQSVDQPMQTGLKAIDSMVPVGRGQRELIIGDRQTGKTAVALDAIVNQKGTGVV 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV IGQK SS+ NV+ KL+ + M++T+VVAATA+++AA Q+I+PY GCT+GEYFRD+
Sbjct: 193 CIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQFIAPYAGCTMGEYFRDI 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER+++IN +EK
Sbjct: 253 GEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARINADEVEKL 312
Query: 407 --KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVG 464
K+ K G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFNS RPAIN G
Sbjct: 313 TAGKVKGK-TGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAINAG 371
Query: 465 LSVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLM 524
+SVSRVGGAAQ K++KKL G IR+ LAQYREL +FS+F+SDLD T+ QL +GE ++ LM
Sbjct: 372 ISVSRVGGAAQTKVIKKLGGGIRLALAQYRELAAFSQFASDLDEATRKQLQHGEVVTELM 431
Query: 525 KQKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
KQK + E+ + L I N + +P+ + FE + Y R
Sbjct: 432 KQKQFNTLNTAEMALTLWAINNGSYSDVPVSKALTFEAEFLSYVR 476
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 156/342 (45%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G IK V TG+ + P+G +GR++N LG PID KG IN+ K +PI
Sbjct: 71 VGAVVLGEYEHIKEGDEVKCTGRILEVPIGRELVGRVVNALGQPIDGKGPINAAKTAPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GKT ++ I N
Sbjct: 131 KIAPGVIARQSVDQPMQTGLKAIDSMVPVGRGQRELIIGDRQTGKTAVALDAIVN----Q 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ +G+++ + +++E ++ ++ +E + + G ++
Sbjct: 187 KGTGVVCIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQFIAPYAGCTMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTL---------------A 812
E FR+ G+D L+ D++ + +A ++S +L R P Y + A
Sbjct: 247 EYFRDIGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARINA 306
Query: 813 EEMGKLQERISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
+E+ KL K G++T++ I A D++ P+ + D I L + GI P
Sbjct: 307 DEVEKLTAGKVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
AI+ S S+ + G KV + ++ L +Y+EL
Sbjct: 367 AINAGISVSR-----VGGAAQTKVIKKLGGGIRLALAQYREL 403
>gi|325460131|gb|ADZ14058.1| ATP synthase beta chain [Burkholderia tropica]
Length = 342
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/316 (72%), Positives = 267/316 (84%)
Query: 581 KVQQQIGENIVRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGE 640
+VQQQ+G+ +VRTI G ++G++R T+V +TGKPI PVG TLGRI++VLG PID G
Sbjct: 23 EVQQQLGDGVVRTICLGASDGLRRGTVVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGP 82
Query: 641 INSKKKSPIHTLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMM 700
I S+ IH P F + +LETGIKVIDL+CPF KGGK+GLFGGAGVGKTVNMM
Sbjct: 83 IVSETTRAIHQKAPAFDELSPSAELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMM 142
Query: 701 ELIRNIAIEHKGCSVFIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVA 760
ELI NIA EH G SVF GVGER+REGNDFYHEMK+SNVLDKV+L+YGQMNEP GNRLRVA
Sbjct: 143 ELINNIAKEHGGFSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVA 202
Query: 761 LTGLSIAEEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQE 820
LTGL++AE FR+ G DVL F+DNIYRFTLAGTEVSA+LGR PSAVGYQPTLAEEMGKLQE
Sbjct: 203 LTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQE 262
Query: 821 RISSTKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYPAIDPLESY 880
RI+STK G+ITSVQA+YVPADDLTDPSP+TTF HLD+T+VLSR IA LGIYPA+DPL+S
Sbjct: 263 RITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST 322
Query: 881 SKQLDPYIVGEEHYKV 896
S+Q+DP ++GEEHY +
Sbjct: 323 SRQIDPNVIGEEHYSI 338
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 128/312 (41%), Gaps = 19/312 (6%)
Query: 176 NLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKIAPGIMDRE 235
L +G T K +PVG LGRI++ G ID + + + + AP +
Sbjct: 43 GLRRGTVVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPIVSETTRAIHQKAPAFDELS 102
Query: 236 SVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIIN-QKNKNVICIYVCIG 294
E L TGIK ID + P KG + + G GKT ++ I N K ++ +G
Sbjct: 103 PSAELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGFSVFAGVG 162
Query: 295 QKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDLGQDCLII 354
++ + +++K N +D +V + + TG T+ E+FRD G D L
Sbjct: 163 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 222
Query: 355 YDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEKKKIFNKNN 414
D++ + A ++S LL R P V Y L E K+ + KK
Sbjct: 223 VDNIYRFTLAGTEVSALLGR------MPSAVGY-QPTLAEEMGKLQERITSTKK------ 269
Query: 415 GTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGLSVSR----- 469
G++T+ + D+T P D + L ++ + PA++ S SR
Sbjct: 270 GSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPN 329
Query: 470 VGGAAQYKIVKK 481
V G Y I ++
Sbjct: 330 VIGEEHYSITRR 341
>gi|347541525|ref|YP_004848951.1| ATP synthase F1 subunit alpha [Pseudogulbenkiania sp. NH8B]
gi|345644704|dbj|BAK78537.1| ATP synthase F1, alpha subunit [Pseudogulbenkiania sp. NH8B]
Length = 514
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/404 (57%), Positives = 312/404 (77%), Gaps = 2/404 (0%)
Query: 168 AVLIDDLKNLTQGQKCFCTEKIFEIPVGFELLGRIVNSKGEFIDNKKKFLIKNRETVEKI 227
AV++ + +++++G + CT +I E+PVG EL+GR+VN+ G+ ID K K +EKI
Sbjct: 73 AVILGEYEHISEGNEVKCTGRILEVPVGPELVGRVVNALGQPIDGKGPLNAKLSSPIEKI 132
Query: 228 APGIMDRESVNEPLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKNKNVI 287
APG++ R+SV++P+ TG+KSIDSM+P+G+GQRELIIGDRQTGKT +A+D I+NQK VI
Sbjct: 133 APGVIARKSVDQPMQTGLKSIDSMVPVGRGQRELIIGDRQTGKTAVALDAIVNQKGTGVI 192
Query: 288 CIYVCIGQKISSLINVINKLKYYNCMDYTVVVAATAADSAAEQYISPYTGCTIGEYFRDL 347
CIYV +GQK SS+ NV+ KL+ + M +T+VVAA A+++AA Q+I+PY+GCT+GEYFRD+
Sbjct: 193 CIYVAVGQKASSIANVVRKLEEHGAMGHTIVVAAAASEAAALQFIAPYSGCTMGEYFRDI 252
Query: 348 GQDCLIIYDDLTKHAWAYRQISLLLRRPPGREAFPGDVFYLHSRLLERSSKINKYFLEK- 406
G+D LI+YDDL+K A AYRQISLLLRRPPGREA+PGDVFYLHSRLLER+S+IN+ +EK
Sbjct: 253 GEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRINEDEVEKL 312
Query: 407 -KKIFNKNNGTLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNSNYRPAINVGL 465
K G+LTA PIIET GDV++F+PTNVISITDGQIFL+T+LFN+ RPAIN G+
Sbjct: 313 TKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGI 372
Query: 466 SVSRVGGAAQYKIVKKLSGDIRIMLAQYRELESFSKFSSDLDIVTKTQLYNGEKISLLMK 525
SVSRVGGAAQ K++KKL G IR+ LAQYREL +FS+F+SDLD T+ QL +GE ++ LMK
Sbjct: 373 SVSRVGGAAQTKVIKKLGGGIRLALAQYRELAAFSQFASDLDEATRKQLQHGEIVTELMK 432
Query: 526 QKPHENYSIVELIIILLIIKNRFFFKIPIKQIELFEINIIKYFR 569
QK S E+ + L + ++ +P+K+ FE + Y R
Sbjct: 433 QKQFSTLSTAEMALTLWAVNKGYYEDVPVKKALAFEAAFLAYVR 476
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 154/342 (45%), Gaps = 31/342 (9%)
Query: 591 VRTIAFGNTNGIKRNTIVVDTGKPILTPVGDCTLGRILNVLGDPIDNKGEINSKKKSPIH 650
V + G I V TG+ + PVG +GR++N LG PID KG +N+K SPI
Sbjct: 71 VGAVILGEYEHISEGNEVKCTGRILEVPVGPELVGRVVNALGQPIDGKGPLNAKLSSPIE 130
Query: 651 TLPPKFSNQIFNNNILETGIKVIDLLCPFLKGGKIGLFGGAGVGKTVNMMELIRNIAIEH 710
+ P + + ++TG+K ID + P +G + + G GKT ++ I N
Sbjct: 131 KIAPGVIARKSVDQPMQTGLKSIDSMVPVGRGQRELIIGDRQTGKTAVALDAIVN----Q 186
Query: 711 KGCSV---FIGVGERSREGNDFYHEMKESNVLDKVSLIYGQMNEPSGNRLRVALTGLSIA 767
KG V ++ VG+++ + +++E + ++ +E + + +G ++
Sbjct: 187 KGTGVICIYVAVGQKASSIANVVRKLEEHGAMGHTIVVAAAASEAAALQFIAPYSGCTMG 246
Query: 768 EEFRNSGKDVLLFIDNIYRFTLAGTEVSAMLGRTPSAVGYQPTLAEEMGKLQERIS---- 823
E FR+ G+D L+ D++ + +A ++S +L R P Y + +L ER S
Sbjct: 247 EYFRDIGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRINE 306
Query: 824 -----------STKNGTITSVQAIYVPADDLTDPSPSTTFTHLDSTIVLSRQIAELGIYP 872
K G++T++ I A D++ P+ + D I L + GI P
Sbjct: 307 DEVEKLTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRP 366
Query: 873 AIDPLESYSKQLDPYIVGEEHYKVANE----VKFYLQKYKEL 910
AI+ S S+ + G KV + ++ L +Y+EL
Sbjct: 367 AINAGISVSR-----VGGAAQTKVIKKLGGGIRLALAQYREL 403
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.139 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,019,264,014
Number of Sequences: 23463169
Number of extensions: 618642370
Number of successful extensions: 1855917
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 30340
Number of HSP's successfully gapped in prelim test: 4108
Number of HSP's that attempted gapping in prelim test: 1702895
Number of HSP's gapped (non-prelim): 67217
length of query: 915
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 763
effective length of database: 8,792,793,679
effective search space: 6708901577077
effective search space used: 6708901577077
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)