RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2106
(313 letters)
>d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio
harveyi [TaxId: 669]}
Length = 302
Score = 85.7 bits (211), Expect = 7e-20
Identities = 25/226 (11%), Positives = 61/226 (26%), Gaps = 38/226 (16%)
Query: 107 TIIYSHGNGCDMGQSLATFMDLSARLKCNVLLYDYSGY-GSSTGRASEANLYWDIEAVYH 165
TI+ + G M + + +V YD + G S+G E + ++
Sbjct: 34 TILIASGFARRMDHFAG-LAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMTTGKNSLCT 92
Query: 166 TLRLKYNINCDQIILYGQSIGSVPTVYLASRVNVAGVILHCALLSALRVVFPNFRKSLWF 225
I L S+ + + S + ++ +I +++ +
Sbjct: 93 VYHWLQTKGTQNIGLIAASLSARVAYEVISDLELSFLITAVGVVNLRDTLEKALGFDYLS 152
Query: 226 DGLKNI--------------------------------DKLPKIKSPVLVIHGTRDEIVD 253
+ + DK+ P++ D+ V
Sbjct: 153 LPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVK 212
Query: 254 FSHGMTIYESCPN-VVEPLWVPGAGHN---NIEMFEQYLTRLDKFI 295
+ + + G+ H+ N+ + + + K
Sbjct: 213 QEEVYDMLAHIRTGHCKLYSLLGSSHDLGENLVVLRNFYQSVTKAA 258
>d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase
{Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 360
Score = 73.8 bits (180), Expect = 2e-15
Identities = 39/215 (18%), Positives = 66/215 (30%), Gaps = 22/215 (10%)
Query: 107 TIIYSHGNGCDMGQSLATFMDLSARLKCNVLLYDYSGYGSSTGRASEANLY-WDIEAVYH 165
+I G +S +L +D G G A Y AV
Sbjct: 133 AVIMLGGLESTKEESFQ-MENLVLDRGMATATFDGPGQGEMFEYKRIAGDYEKYTSAVVD 191
Query: 166 TLRLKYNINCDQIILYGQSIGSVPTVYLASR-------VNVAGVILHCALLSALRVVFPN 218
L I D I + G+S+G + A+ ++ G + +
Sbjct: 192 LLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPRLAACISWGGFSDLDYWDLETPLTKES 251
Query: 219 FRKSLWFDGLK-----------NIDKLPKIKSPVLVIHGTRDEIVDFSHGMTIYESCPNV 267
++ D L+ D L +I P ++HG DE V S T+ E P
Sbjct: 252 WKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAE 310
Query: 268 VEPLWV-PGAGHNNIEMFEQYLTRLDKFINEELMQ 301
L V H + + + ++ + L+
Sbjct: 311 HLNLVVEKDGDHCCHNLGIRPRLEMADWLYDVLVA 345
>d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga
maritima [TaxId: 2336]}
Length = 322
Score = 62.4 bits (150), Expect = 1e-11
Identities = 29/265 (10%), Positives = 60/265 (22%), Gaps = 56/265 (21%)
Query: 85 WTTNCKGNKIACIMIPHNEA---VFTIIYSHGNGCDMGQSLATFMDLSARLKCNVLLYDY 141
+ +G +I ++ + ++ G G + + D
Sbjct: 59 TFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPH--DWLFWPSMGYICFVMDT 116
Query: 142 SGYGSSTGRASEA----------------------------NLYWDIEAVYHTLRLKYNI 173
G GS + ++ D +
Sbjct: 117 RGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQV 176
Query: 174 NCDQIILYGQSIGSVPTVYLASRV-NVAGVILHCALLSALRVVFPNFRKSLWFDGLKNID 232
+ ++I++ G S G + +++ ++ L R + + +
Sbjct: 177 DQERIVIAGGSQGGGIALAVSALSKKAKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLK 236
Query: 233 KLP--------------------KIKSPVLVIHGTRDEIVDFSHGMTIYESCPNVVEPLW 272
+ K P L G D I S Y E
Sbjct: 237 THRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRI 296
Query: 273 VPGAGHNNIEMF--EQYLTRLDKFI 295
P H F + + L K
Sbjct: 297 YPYNNHEGGGSFQAVEQVKFLKKLF 321
>d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis
[TaxId: 1423]}
Length = 186
Score = 56.2 bits (134), Expect = 4e-10
Identities = 23/197 (11%), Positives = 49/197 (24%), Gaps = 19/197 (9%)
Query: 107 TIIYSHGNGCDMGQSLATFM-DLSARLKCNVLLYDYSGYGSSTGRASEANLYWDIEAVYH 165
+ HG ++ + + +E
Sbjct: 3 QVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPL-----------QPRLEDWLD 51
Query: 166 TLRLKYNINCDQIILYGQSIGSVPTVYLASRV-NVAGVILHCALLSALRVVFPNFRKSLW 224
TL L + + L S+G + + A + + + + +
Sbjct: 52 TLSLYQHTLHENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQMLDEF 111
Query: 225 FDGLKNIDKLPKIKSPVLVIHGTRDEIVDFSHGMTIYESCPNVVEPLWVPGAGHNNIEM- 283
G + K+ + VI D+IV FS + + V GH +
Sbjct: 112 TQGSFDHQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQID--AALYEVQHGGHFLEDEG 169
Query: 284 ---FEQYLTRLDKFINE 297
L + ++
Sbjct: 170 FTSLPIVYDVLTSYFSK 186
>d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus
subtilis [TaxId: 1423]}
Length = 318
Score = 56.7 bits (135), Expect = 7e-10
Identities = 32/249 (12%), Positives = 55/249 (22%), Gaps = 47/249 (18%)
Query: 95 ACIMIPHNEAVFTIIYSHGNGCDMGQSLATFMDLSARLKCNVLLYDYSGYGSSTGRASEA 154
+P E I + M A G S +
Sbjct: 71 GWYAVPDKEGPHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISP 130
Query: 155 ---------------------NLYWDIEAVYHTLRLKYNINCDQIILYGQSIGSVPTVYL 193
+Y D + ++ +I + G S G T+
Sbjct: 131 HGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAA 190
Query: 194 ASR--VNVAGVILHCA---------------------LLSALRVVFPNFRKSLWFDGLKN 230
A+ + A V + +
Sbjct: 191 AALSDIPKAAVADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDI 250
Query: 231 IDKLPKIKSPVLVIHGTRDEIVDFSHGMTIYESCPNVVEPLWVPGAGHNNIEMFEQYLTR 290
++ ++K PVL+ G D++ S Y E GH E + T
Sbjct: 251 MNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGH---EYIPAFQTE 307
Query: 291 LDKFINEEL 299
F + L
Sbjct: 308 KLAFFKQIL 316
>d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris
[TaxId: 339]}
Length = 218
Score = 54.5 bits (130), Expect = 2e-09
Identities = 33/205 (16%), Positives = 61/205 (29%), Gaps = 25/205 (12%)
Query: 100 PHNEAVFTIIYSHGN-GCDMGQSLATFM-DLSARLKCNVLLYDYSGYGSSTGRASEANLY 157
+ + G M + T L V+ +++ G+S G +
Sbjct: 32 AVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDHGDGE 91
Query: 158 WDIEAVYHTLRLKYNINCDQIILYGQSIGSVPTVYLASRVNVAGVILHCALLSALRVVFP 217
D + ++ D + L G S G+ ++ A+ + +I P
Sbjct: 92 QD-DLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAALEPQVLISIAP---------P 141
Query: 218 NFRKSLWFDGLKNIDKLPKIKSPVLVIHGTRDEIVDFSHGMTIYESCPNVVEPLWVPGAG 277
R + + LVI G DEIVD E+ + +P
Sbjct: 142 AGRWDFSD---------VQPPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTS 192
Query: 278 HNNIEMFEQYLTRLDKFINEELMQR 302
H F + L L + + +
Sbjct: 193 H----FFHRKLIDLRGALQHGVRRW 213
>d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus
thermophilus [TaxId: 274]}
Length = 238
Score = 53.2 bits (126), Expect = 7e-09
Identities = 30/211 (14%), Positives = 56/211 (26%), Gaps = 23/211 (10%)
Query: 107 TIIYSHGNGCDMGQSLATFMDLSARLKCNVLLYDYSGYGSS-----------TGRASEAN 155
++ HG + + + A +L +D +G
Sbjct: 26 LLLALHGLQGS-KEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRV 84
Query: 156 LYWDIEAVYHTLRLKYNINCDQIILYGQSIGSVPTVYLASRVN-----VAGVILHCALLS 210
E + L G S+G+ L + +A + +
Sbjct: 85 ALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKL 144
Query: 211 ALRVVFPNFRKSLWFDGLKNIDKLPKIKSPVLVIHGTRDEIVDFSHGMTIYESC-----P 265
V + + P+L +HG+RD IV + E+
Sbjct: 145 PQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPE 204
Query: 266 NVVEPLWVPGAGHN-NIEMFEQYLTRLDKFI 295
+ GAGH M L L+ ++
Sbjct: 205 GRLARFVEEGAGHTLTPLMARVGLAFLEHWL 235
>d2rhwa1 c.69.1.10 (A:4-286)
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase
(BPHD) {Burkholderia xenovorans [TaxId: 36873]}
Length = 283
Score = 49.1 bits (115), Expect = 2e-07
Identities = 13/83 (15%), Positives = 27/83 (32%), Gaps = 2/83 (2%)
Query: 216 FPNFRKSLWFDGLKNIDKLPKIKSPVLVIHGTRDEIVDFSHGMTIYESCPNVVEPLWVPG 275
F + +L +IK+ + G D V HG+ + + +
Sbjct: 201 FLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDD-ARLHVFSK 259
Query: 276 AGHN-NIEMFEQYLTRLDKFINE 297
GH E +++ + F+
Sbjct: 260 CGHWAQWEHADEFNRLVIDFLRH 282
>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris)
[TaxId: 9615]}
Length = 377
Score = 48.9 bits (115), Expect = 3e-07
Identities = 12/76 (15%), Positives = 23/76 (30%)
Query: 203 ILHCALLSALRVVFPNFRKSLWFDGLKNIDKLPKIKSPVLVIHGTRDEIVDFSHGMTIYE 262
+ A P + + L + P+ V +G D + D +
Sbjct: 278 AVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLS 337
Query: 263 SCPNVVEPLWVPGAGH 278
PN++ +P H
Sbjct: 338 KLPNLIYHRKIPPYNH 353
>d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens
[TaxId: 615]}
Length = 313
Score = 48.0 bits (112), Expect = 6e-07
Identities = 29/257 (11%), Positives = 71/257 (27%), Gaps = 9/257 (3%)
Query: 40 RMITQCAFFPPRPASYKIIEHGQKKNKCILKMNQKKHAIISRNVFWTTNCKGNKIACIMI 99
+++ R + +++ + ++ A + + + + +
Sbjct: 62 KVLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQ 121
Query: 100 PHNEAVFTIIYSHGNGCDMGQSLATFMDLSARLKCNVLLYDYSGYGSSTGRASEANLYWD 159
H E V ++ + + D ++R S + A
Sbjct: 122 THPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQ- 180
Query: 160 IEAVYHTLRLKYNINCDQIILYGQSIGSVPTVYLASRVNVAGVILHCALLSALRVVFPNF 219
+ + L+ G T+ + G + + +
Sbjct: 181 -----RLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTH 235
Query: 220 RKSLWFDGLKNIDKLPKIKSPVLVIHGTRDEIVDFSHGMTIYESCPNVVEPLWVPGAGH- 278
L D + P +++HG D + + ++ P E V GAGH
Sbjct: 236 LGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPE-AELHIVEGAGHS 294
Query: 279 -NNIEMFEQYLTRLDKF 294
+ + Q + D+F
Sbjct: 295 YDEPGILHQLMIATDRF 311
>d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC
{Janthinobacterium sp. J3 [TaxId: 213804]}
Length = 268
Score = 46.4 bits (108), Expect = 2e-06
Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 234 LPKIKSPVLVIHGTRDEIVDFSHGMTIYESCPNVVEPLWVPGAGHN-NIEMFEQYLTRLD 292
+ K++ P LV+ G D++V + + +P GH IE E +
Sbjct: 204 IRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDD-SWGYIIPHCGHWAMIEHPEDFANATL 262
Query: 293 KFINE 297
F++
Sbjct: 263 SFLSL 267
>d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 322
Score = 46.0 bits (107), Expect = 2e-06
Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 2/90 (2%)
Query: 210 SALRVVFPNFRKSLWFDGLKNIDKLPKIKSPVLVIHGTRDEIVDFSHGMTIYESCPNVVE 269
S R +R KI P L++ +D ++ + + P+ ++
Sbjct: 231 SGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPH-LK 289
Query: 270 PLWVPGAGHN-NIEMFEQYLTRLDKFINEE 298
+ GH ++ + L K+++ +
Sbjct: 290 RGHIEDCGHWTQMDKPTEVNQILIKWLDSD 319
>d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas
campestris, pv. citri [TaxId: 339]}
Length = 313
Score = 45.9 bits (107), Expect = 3e-06
Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
Query: 232 DKLPKIKSPVLVIHGTRDEIVDFSHGMTIYESCPNVVEPLWVPGAGHN--NIEMFEQYLT 289
D P +++HG D + ++++ P + P +GH+ E + +
Sbjct: 249 DAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWPK-AQLQISPASGHSAFEPENVDALVR 307
Query: 290 RLDKF 294
D F
Sbjct: 308 ATDGF 312
>d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD
{Pseudomonas fluorescens [TaxId: 294]}
Length = 271
Score = 45.6 bits (106), Expect = 3e-06
Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Query: 207 ALLSALRVVFPNFRKSLWFDGLKNIDKLPKIKSPVLVIHGTRDEIVDFSHGMTIYESCPN 266
+ +FP R+ + + + + + L+IHG D++V S + + E
Sbjct: 180 GFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDR 239
Query: 267 VVEPLWVPGAGHN-NIEMFEQYLTRLDKFINE 297
+ GH IE +++ + +F NE
Sbjct: 240 -AQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 270
>d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase
{Penicillium funiculosum [TaxId: 28572]}
Length = 318
Score = 43.9 bits (103), Expect = 1e-05
Identities = 19/131 (14%), Positives = 37/131 (28%), Gaps = 22/131 (16%)
Query: 170 KYNINCDQIILYGQSIG---------SVPTVYLASRVNVAGVILHCALLSALRVVFPNFR 220
+N+N + + + G + G + V+ AG CA N
Sbjct: 5 AFNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGY 64
Query: 221 KSL--------WFDGLKNIDKLPKIKSPVLVIHGTRDEIVDFSHGMTIYE-----SCPNV 267
S+ + G + + + + G+ D V + +
Sbjct: 65 PSITTPTANMKSWSGNQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSAN 124
Query: 268 VEPLWVPGAGH 278
V + GA H
Sbjct: 125 VSYVTTTGAVH 135
>d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC
{Streptomyces purpurascens [TaxId: 1924]}
Length = 297
Score = 43.4 bits (100), Expect = 1e-05
Identities = 17/82 (20%), Positives = 24/82 (29%), Gaps = 2/82 (2%)
Query: 216 FPNFRKSLWFDGLKNIDKLPKIKSPVLVIHGTRDEIVDFSHGMTIYESCPNVVEPLWVPG 275
P SL +L ++ P LVI D I HG + P +PG
Sbjct: 214 EPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPT-ARLAEIPG 272
Query: 276 AGHN-NIEMFEQYLTRLDKFIN 296
GH + +
Sbjct: 273 MGHALPSSVHGPLAEVILAHTR 294
Score = 28.3 bits (61), Expect = 1.2
Identities = 14/73 (19%), Positives = 23/73 (31%)
Query: 107 TIIYSHGNGCDMGQSLATFMDLSARLKCNVLLYDYSGYGSSTGRASEANLYWDIEAVYHT 166
++ G F A +V+ YD+ G ST R A+ Y E
Sbjct: 24 ALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADA 83
Query: 167 LRLKYNINCDQII 179
+ + D+
Sbjct: 84 VAVLDGWGVDRAH 96
>d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter
autotrophicus [TaxId: 280]}
Length = 310
Score = 43.0 bits (99), Expect = 2e-05
Identities = 12/87 (13%), Positives = 24/87 (27%), Gaps = 1/87 (1%)
Query: 213 RVVFPNFRKSLWFDGLKNIDKLPKIKSPVLVIHGTRDEIVDFSHGMTIYESCPNVVEPLW 272
++V + + + G +D+++ + EPL
Sbjct: 224 KMVAQRDQACIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLE 283
Query: 273 VPGAGHN-NIEMFEQYLTRLDKFINEE 298
+ AGH + L F E
Sbjct: 284 IADAGHFVQEFGEQVAREALKHFAETE 310
>d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp.
[TaxId: 1831]}
Length = 291
Score = 42.9 bits (99), Expect = 2e-05
Identities = 10/85 (11%), Positives = 31/85 (36%), Gaps = 2/85 (2%)
Query: 213 RVVFPNFRKSLWFDGLKNIDKLPKIKSPVLVIHGTRDEIVDFSHGMTIYESCPNVVEPLW 272
+ ++ ++ L + P L+ GT ++ + + ES PN + +
Sbjct: 205 EIPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPN-CKTVD 263
Query: 273 VPGAGHN-NIEMFEQYLTRLDKFIN 296
+ H + + + + +++
Sbjct: 264 IGPGLHYLQEDNPDLIGSEIARWLP 288
>d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 283
Score = 39.1 bits (90), Expect = 4e-04
Identities = 30/218 (13%), Positives = 56/218 (25%), Gaps = 42/218 (19%)
Query: 115 GCDMGQSLATFMDLSARL--KCNVLLYDYSGYGSSTGRASEANLYWDIEAV--YHTLRLK 170
G F+ LS + + L GYG+ TG + L D++ +
Sbjct: 68 GTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTAL-LPADLDTALDAQARAIL 126
Query: 171 YNINCDQIILYGQSIGSVPTVYLASRVNVAG--VILHCALLSA----------------- 211
++L G S G++ LA R+ A L+
Sbjct: 127 RAAGDAPVVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLG 186
Query: 212 --------LRVVFPNFRKSLWFDGLKNIDKLPKIKSPVLVIHGTRDEIVDFSHGMTIYES 263
+ + + + +PVL++ +
Sbjct: 187 EGLFAGELEPMSDARLLAMGRYARFLAGPRPGRSSAPVLLVRASEPLGDWQEERGDWRAH 246
Query: 264 CPNVVEPLWVPGAGHNNI---------EMFEQYLTRLD 292
VPG H + E +L ++
Sbjct: 247 WDLPHTVADVPG-DHFTMMRDHAPAVAEAVLSWLDAIE 283
>d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces
aureofaciens [TaxId: 1894]}
Length = 277
Score = 38.3 bits (87), Expect = 6e-04
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 232 DKLPKIKSPVLVIHGTRDEIVDFSHGMTIYESCPNVVEPLWVPGAGHN-NIEMFEQYLTR 290
+P+I P L++HGT D + + ++ E + V GA H E+ T
Sbjct: 211 ADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTA 270
Query: 291 LDKFINE 297
L F+ +
Sbjct: 271 LLAFLAK 277
>d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus
niger [TaxId: 5061]}
Length = 394
Score = 37.8 bits (86), Expect = 0.001
Identities = 12/81 (14%), Positives = 22/81 (27%), Gaps = 3/81 (3%)
Query: 198 NVAGVILHCALLSALRVVFPNFRKSLWFDGLKNIDKLPKIKSPVLVIHGTRDEIVDFSHG 257
V+ L + A+ + +G + K I P +D
Sbjct: 295 MVSLYWLTESFPRAIHTYRETTPTASAPNGATMLQKELYIHKPFGFSFFPKDLCPVPRSW 354
Query: 258 MTIYESCPNVVEPLWVPGAGH 278
+ + N+V GH
Sbjct: 355 I---ATTGNLVFFRDHAEGGH 372
>d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate
hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId:
1831]}
Length = 281
Score = 37.6 bits (85), Expect = 0.001
Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 235 PKIKSPVLVIHGTRDEIVDFSHGMTIYESCPNVVEPLWVPGAGHN-NIEMFEQYLTRLDK 293
++ VLV HG +D IV + + + + E + + GH +E ++ L +
Sbjct: 219 GRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKH-AELVVLDRCGHWAQLERWDAMGPMLME 277
Query: 294 FI 295
Sbjct: 278 HF 279
>d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId:
1905]}
Length = 260
Score = 36.9 bits (84), Expect = 0.002
Identities = 32/206 (15%), Positives = 73/206 (35%), Gaps = 31/206 (15%)
Query: 108 IIYSHGNGCDMGQSLATFMDLSARLKCNVLLYDYSGYGSSTGRASEANLYWDIEAVYHTL 167
++ S G S+A A V D + L ++ +
Sbjct: 55 VVISPGFTAY-QSSIAWLGPRLASQGFVVFTIDTNTTLDQPDSRGRQ-LLSALDYLTQRS 112
Query: 168 RLKYNINCDQIILYGQSIGSVPTVYLASRVNVAGVILHCALLSALRVVFPNFRKSLWFDG 227
++ ++ ++ + G S+G ++ A + + ++ G
Sbjct: 113 SVRTRVDATRLGVMGHSMGGGGSLEAAKS-------------------RTSLKAAIPLTG 153
Query: 228 LKNIDKLPKIKSPVLVIHGTRDEIVDFS-HGMTIYESCPNVVEPLWV--PGAGH-----N 279
P++++P LV+ D + + H YES P ++ ++ GA H +
Sbjct: 154 WNTDKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTS 213
Query: 280 NIEMFEQYLTRLDKFINEELMQRYHQ 305
+ + + ++ L +FI+ + RY Q
Sbjct: 214 DTTIAKYSISWLKRFIDSD--TRYEQ 237
>d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 290
Score = 37.2 bits (84), Expect = 0.002
Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
Query: 232 DKLPKIKSPVLVIHGTRDEIVDFSHGMTIYESCPNVVEPLWVPGAGHN-NIEMFEQYLTR 290
DK+ IK P L+ G DE+ + I+E E H E E Y
Sbjct: 224 DKISAIKIPTLITVGEYDEVTP-NVARVIHEKIAG-SELHVFRDCSHLTMWEDREGYNKL 281
Query: 291 LDKFINEEL 299
L FI + L
Sbjct: 282 LSDFILKHL 290
>d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId:
42739]}
Length = 319
Score = 36.7 bits (84), Expect = 0.002
Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 12/95 (12%)
Query: 108 IIYSHGNGCD--MGQSLATFMDLSARLK---CNVLLYDYSGYGSSTGRASEA-NLYWDIE 161
+I HG + + + + L+ V + + SG+ S G L ++
Sbjct: 11 VILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQLLAYVK 70
Query: 162 AVYHTLRLKYNINCDQIILYGQSIGSVPTVYLASR 196
V ++ L G S G + + Y+A+
Sbjct: 71 QVLAAT------GATKVNLIGHSQGGLTSRYVAAV 99
>d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId:
51671]}
Length = 279
Score = 36.1 bits (81), Expect = 0.004
Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 235 PKIKSPVLVIHGTRDEIVDF-SHGMTIYESCPNVVEPLWVPGAGHN-NIEMFEQYLTRLD 292
P L++HGT+D I+ + +++ P + + V GA H ++ L
Sbjct: 216 RAAGKPTLILHGTKDNILPIDATARRFHQAVPE-ADYVEVEGAPHGLLWTHADEVNAALK 274
Query: 293 KFINE 297
F+ +
Sbjct: 275 TFLAK 279
>d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens
[TaxId: 294]}
Length = 271
Score = 35.7 bits (80), Expect = 0.005
Identities = 19/74 (25%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Query: 224 WFDGLKNIDKLPKIKSPVLVIHGTRDEIVDFSHGMTIYESCPNVVEPLWVPGAGHN-NIE 282
F + KI P LVIHG D+IV F + E A H +
Sbjct: 197 AFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVT 256
Query: 283 MFEQYLTRLDKFIN 296
+Q L F+
Sbjct: 257 HAQQLNEDLLAFLK 270
>d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans
[TaxId: 1916]}
Length = 275
Score = 35.7 bits (80), Expect = 0.005
Identities = 22/97 (22%), Positives = 32/97 (32%), Gaps = 1/97 (1%)
Query: 200 AGVILHCALLSALRVVFPNFRKSLWFDGLKNIDKLPKIKSPVLVIHGTRDEIVDFSHGMT 259
G+I H L + ++ F D L +I PVLV HGT D++V ++
Sbjct: 177 QGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAP 236
Query: 260 IYESCPNVVEPLWVPGAGHN-NIEMFEQYLTRLDKFI 295
G H E L F+
Sbjct: 237 KSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAFV 273
>d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium
radiobacter [TaxId: 358]}
Length = 293
Score = 35.3 bits (79), Expect = 0.006
Identities = 11/63 (17%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Query: 234 LPKIKSPVLVIHGTRDEIVDFSHGMTIYESCPNVVEPLWVPGAGHN-NIEMFEQYLTRLD 292
PV +I G D V ++ + + + GH +E E + R+
Sbjct: 230 HTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIK 289
Query: 293 KFI 295
Sbjct: 290 TAF 292
>d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]}
Length = 285
Score = 34.8 bits (79), Expect = 0.009
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 12/93 (12%)
Query: 108 IIYSHG-NGCDMGQSLATFMDLSARLK---CNVLLYDYSGYGSSTGRASEANLYWDIEAV 163
I+ +HG G D + + + + L+ V + + S +S R + L +E +
Sbjct: 10 IVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVRGEQ--LLQQVEEI 67
Query: 164 YHTLRLKYNINCDQIILYGQSIGSVPTVYLASR 196
++ L G S G Y+A+
Sbjct: 68 VALS------GQPKVNLIGHSHGGPTIRYVAAV 94
>d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens
[TaxId: 294]}
Length = 273
Score = 34.9 bits (78), Expect = 0.009
Identities = 18/73 (24%), Positives = 24/73 (32%), Gaps = 1/73 (1%)
Query: 224 WFDGLKNIDKLPKIKSPVLVIHGTRDEIVDFSHGMTIYESCPNVVEPLWVPGAGHN-NIE 282
F + L KI P LV+HG D++V + GA H
Sbjct: 199 AFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDT 258
Query: 283 MFEQYLTRLDKFI 295
+Q L FI
Sbjct: 259 HKDQLNADLLAFI 271
>d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp.
[TaxId: 512]}
Length = 318
Score = 34.4 bits (77), Expect = 0.015
Identities = 34/265 (12%), Positives = 56/265 (21%), Gaps = 69/265 (26%)
Query: 98 MIPHNEAVFTIIYSHGNGCDMGQSLAT------FMDLSARLKCNVLLYDYSGYGSSTGRA 151
IP + I HG T + + R + + D SG G S
Sbjct: 51 QIPQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDI 110
Query: 152 SEANLYWDIEAVYHTLRLKYNINCDQIILYGQSIGSVPTVYLASRVNVAGVIL------- 204
S N +A +L + + + P + ++ V
Sbjct: 111 SAINAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVP 170
Query: 205 ---------------HCALLSALRVVFPNFRKSLWFDGLKNIDKLP-------------- 235
L L + P
Sbjct: 171 DWLGSMPTPNPTVANLSKLAIKLDGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC 230
Query: 236 --------KIKSPVLVIHGTRDEIVDFSHGMTIYESCPN-------------VVEPLWVP 274
PVLV+ G E + L V
Sbjct: 231 PKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVH 290
Query: 275 GAGH------NNIEMFEQYLTRLDK 293
G H NN+++ + L + +
Sbjct: 291 GNSHMMMQDRNNLQVADLILDWIGR 315
>d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase
PepX, middle domain {Lactococcus lactis [TaxId: 1358]}
Length = 405
Score = 34.1 bits (77), Expect = 0.019
Identities = 10/55 (18%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 231 IDKLPKIKSPVLVIHGTRDEIVDFSHGMTIYESCPNVVEP-LWVPGAGHNNIEMF 284
+ K+K+ VL++HG +D V +++ P ++ H + +
Sbjct: 305 LINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHRGAHIYMNSW 359
>d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces
aureofaciens [TaxId: 1894]}
Length = 274
Score = 32.2 bits (71), Expect = 0.061
Identities = 30/226 (13%), Positives = 60/226 (26%), Gaps = 5/226 (2%)
Query: 76 HAIISRNVFWTTNCKGNKIACIMIPHNEAVFTIIYSHGNGCDMGQSLATFMDLSARLKCN 135
A R +T + T + +
Sbjct: 50 IAHDRRGHGHSTPVWDGYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGT 109
Query: 136 VLLYDYSGYGSSTGRASEANLYWDIEAVYHTLRLKYNINCDQIILYGQSIGSVPTVYLAS 195
L + +++ D LK + ++ + + +
Sbjct: 110 GRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPG 169
Query: 196 RVNVAGVILHCALLSALRVVFPNFRKSLWFDGLKNIDKLPKIKSPVLVIHGTRDEIVDF- 254
G ++ + + R F + L K P LV+HG D++V
Sbjct: 170 NKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPID 229
Query: 255 SHGMTIYESCPNVVEPLWVPGAGHN---NIEMFEQYLTRLDKFINE 297
+ G + PN E G+ H E++ L +F+N+
Sbjct: 230 ATGRKSAQIIPNA-ELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274
>d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 263
Score = 31.4 bits (69), Expect = 0.11
Identities = 5/47 (10%), Positives = 15/47 (31%), Gaps = 3/47 (6%)
Query: 238 KSPVLVIHGTRDEIVDFSHGMTIYESCPNV---VEPLWVPGAGHNNI 281
+ ++H DE++ + + + HN++
Sbjct: 202 SIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDV 248
>d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens
[TaxId: 294]}
Length = 218
Score = 30.4 bits (67), Expect = 0.19
Identities = 37/217 (17%), Positives = 69/217 (31%), Gaps = 19/217 (8%)
Query: 97 IMIPHNEAVFTIIYSHGNGCDMGQSLATFMD-LSARLKCNVLL--------YDYSGYGSS 147
I+ P A +I+ HG G D + L L + +G
Sbjct: 6 ILQPAKPADACVIWLHGLGAD-RYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEM 64
Query: 148 TGRASEANLYWDIEAVYHTLRLKYNINCDQIILYGQSIGSVPTVYLASRVNVAGVILHCA 207
+ L + + D I ++ ++LA V+ H A
Sbjct: 65 PSWYDIKAMSPARSISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTA 124
Query: 208 LLSALRVVFPNFRKSLWFDGLKNIDKLPKIKS--PVLVIHGTRDEIVDFSHGMTIYE--- 262
++ + S + + +L + P L +HG D++V + G + +E
Sbjct: 125 FINWQGPLGGVIALSTYAPTFGDELELSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLK 184
Query: 263 SCPNVVEPLWVPGAGHNNIEMFEQYLTRLDKFINEEL 299
S V P GH E+ Q + + ++ L
Sbjct: 185 SRGVTVTWQEYPM-GH---EVLPQEIHDIGAWLAARL 217
>d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain
{Dog (Canis familiaris) [TaxId: 9615]}
Length = 337
Score = 30.9 bits (69), Expect = 0.19
Identities = 27/154 (17%), Positives = 49/154 (31%), Gaps = 18/154 (11%)
Query: 107 TIIYSHGNGCDMGQSLATFM--DLSARLKCNVLLYDYSGYGSSTGRASEANLYWDIEAVY 164
T HG ++ M ++ + N + D+ ++ + N+ V
Sbjct: 72 TRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVA 131
Query: 165 HTLRL---KYNINCDQIILYGQSIGSVPTVYLASRVNVAGVILHCALLSALRVVFPNFRK 221
L + Y+ + Q+ L G S+G+ SR G+ L
Sbjct: 132 QMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRTP--GLGRITGLDPVE--------- 180
Query: 222 SLWFDGLKNIDKLPKIKSP-VLVIHGTRDEIVDF 254
F G +L + V VIH ++ F
Sbjct: 181 -ASFQGTPEEVRLDPTDADFVDVIHTDAAPLIPF 213
>d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 268
Score = 29.7 bits (65), Expect = 0.41
Identities = 19/123 (15%), Positives = 35/123 (28%), Gaps = 14/123 (11%)
Query: 108 IIYSHGNGCDMGQSLATFMDLSARLK-----CNVLLYDYSGYGSSTGRASEANLYWDIEA 162
+I HG + S +F L + V + D S L+ ++
Sbjct: 5 VIVVHG----LFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRE-----SLRPLWEQVQG 55
Query: 163 VYHTLRLKYNINCDQIILYGQSIGSVPTVYLASRVNVAGVILHCALLSALRVVFPNFRKS 222
+ + L S G + L S ++ V +L S + +
Sbjct: 56 FREAVVPIMAKAPQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYL 115
Query: 223 LWF 225
W
Sbjct: 116 KWL 118
Score = 29.3 bits (64), Expect = 0.47
Identities = 5/73 (6%), Positives = 20/73 (27%), Gaps = 9/73 (12%)
Query: 232 DKLPKIKSPVLVIHGTRDEIVDFSHGMTIYESCPNV--------VEPLWVPGAGHN-NIE 282
+ +S + + +++ + + + + G H
Sbjct: 195 GVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHS 254
Query: 283 MFEQYLTRLDKFI 295
Y T ++ ++
Sbjct: 255 NRTLYETCIEPWL 267
>d1dl6a_ g.41.3.1 (A:) Transcription initiation factor TFIIB,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 58
Score = 27.1 bits (60), Expect = 0.48
Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Query: 231 IDKLPKIKSPVLVIHGTRDEIVDFSHGMTIYESCPNVVE 269
+D LP++ P H + D+ G I C VV
Sbjct: 6 LDALPRVTCP---NHPDAILVEDYRAGDMICPECGLVVG 41
>d1p6va_ b.111.1.1 (A:) Small protein B (SmpB) {Aquifex aeolicus
[TaxId: 63363]}
Length = 128
Score = 27.8 bits (62), Expect = 0.86
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 10/91 (10%)
Query: 6 KCKQLVQFQTGIDRITMNLLSFFNLFCCAGCRPSRMITQCAFFPPRPASYKIIEHGQKKN 65
+ K V F+ RI +NL+ P + T P R K++ H ++
Sbjct: 38 REKGTVSFKDSFVRIENGEAWLYNLYI----APYKHATIENHDPLRKR--KLLLHKREIM 91
Query: 66 KCILKMNQKKHAIISRNVFWTTNCKGNKIAC 96
+ K+ +K + II ++W K NK+
Sbjct: 92 RLYGKVQEKGYTIIPLKLYW----KNNKVKV 118
>d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal
domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 280
Score = 27.8 bits (60), Expect = 1.7
Identities = 12/87 (13%), Positives = 23/87 (26%), Gaps = 17/87 (19%)
Query: 229 KNIDKLPKIKSPVLVIHGTRDEIVDFSHGMTIYE----------SCPNVVEPLWVPGAGH 278
K + +L++ D+ V H + N + AGH
Sbjct: 191 KLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGH 250
Query: 279 -------NNIEMFEQYLTRLDKFINEE 298
IE + + +N +
Sbjct: 251 GAGKPTAKVIEEVSDMFAFIARCLNID 277
>d1wjxa_ b.111.1.1 (A:) Small protein B (SmpB) {Thermus thermophilus
[TaxId: 274]}
Length = 120
Score = 25.9 bits (57), Expect = 3.2
Identities = 5/35 (14%), Positives = 16/35 (45%)
Query: 56 KIIEHGQKKNKCILKMNQKKHAIISRNVFWTTNCK 90
K++ H + + + K+ QK ++ +++
Sbjct: 75 KLLLHKHELRRLLGKVEQKGLTLVPLKIYFNERGY 109
>d1yt3a3 c.55.3.5 (A:1-193) Ribonuclease D, catalytic domain
{Escherichia coli [TaxId: 562]}
Length = 193
Score = 25.3 bits (54), Expect = 8.8
Identities = 9/121 (7%), Positives = 23/121 (19%), Gaps = 1/121 (0%)
Query: 16 GIDRITMNLLSFFNLFCCAGCRPSRMITQCAFFPPRPASY-KIIEHGQKKNKCILKMNQK 74
+D + +++ + S K I K + ++
Sbjct: 26 ALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGITDWSPLKAILRDPSITKFLHAGSED 85
Query: 75 KHAIISRNVFWTTNCKGNKIACIMIPHNEAVFTIIYSHGNGCDMGQSLATFMDLSARLKC 134
++ +I + + D AR
Sbjct: 86 LEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFASMVEEYSGVTLDKSESRTDWLARPLT 145
Query: 135 N 135
Sbjct: 146 E 146
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.325 0.139 0.439
Gapped
Lambda K H
0.267 0.0556 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,217,210
Number of extensions: 57015
Number of successful extensions: 241
Number of sequences better than 10.0: 1
Number of HSP's gapped: 234
Number of HSP's successfully gapped: 56
Length of query: 313
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 228
Effective length of database: 1,240,546
Effective search space: 282844488
Effective search space used: 282844488
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 53 (24.6 bits)