Query psy2107
Match_columns 391
No_of_seqs 688 out of 4133
Neff 11.5
Searched_HMMs 29240
Date Sat Aug 17 00:26:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2107.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2107hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 3.2E-44 1.1E-48 321.8 34.8 273 67-391 113-410 (410)
2 4gqb_B Methylosome protein 50; 100.0 1.2E-43 4.1E-48 309.7 32.9 239 113-391 79-330 (344)
3 3ow8_A WD repeat-containing pr 100.0 4.1E-43 1.4E-47 304.0 34.8 260 91-390 55-319 (321)
4 2ynn_A Coatomer subunit beta'; 100.0 1.5E-42 5.3E-47 298.5 34.5 242 111-391 8-258 (304)
5 1got_B GT-beta; complex (GTP-b 100.0 3.7E-42 1.3E-46 300.9 34.4 271 66-389 59-340 (340)
6 1vyh_C Platelet-activating fac 100.0 4.4E-42 1.5E-46 307.9 34.2 243 109-391 101-368 (410)
7 4g56_B MGC81050 protein; prote 100.0 9.7E-42 3.3E-46 299.9 32.0 284 66-391 46-342 (357)
8 3fm0_A Protein CIAO1; WDR39,SG 100.0 2E-41 6.8E-46 296.8 33.2 285 66-391 20-334 (345)
9 3ow8_A WD repeat-containing pr 100.0 4E-41 1.4E-45 291.5 33.4 240 112-391 28-278 (321)
10 2hes_X YDR267CP; beta-propelle 100.0 3.9E-41 1.3E-45 293.1 32.6 270 91-391 31-327 (330)
11 2ynn_A Coatomer subunit beta'; 100.0 2.1E-40 7.2E-45 285.1 35.0 275 66-390 17-300 (304)
12 2pm7_B Protein transport prote 100.0 1.8E-40 6.1E-45 284.6 34.3 250 111-391 4-284 (297)
13 2pbi_B Guanine nucleotide-bind 100.0 1.2E-40 3.9E-45 292.8 33.1 272 66-389 68-354 (354)
14 1got_B GT-beta; complex (GTP-b 100.0 5.4E-40 1.8E-44 287.2 36.2 245 110-391 49-300 (340)
15 3frx_A Guanine nucleotide-bind 100.0 7.2E-40 2.5E-44 283.7 35.3 273 66-390 21-315 (319)
16 4gqb_B Methylosome protein 50; 100.0 2.3E-40 7.7E-45 289.0 30.0 242 113-391 27-288 (344)
17 2hes_X YDR267CP; beta-propelle 100.0 9.8E-40 3.4E-44 284.2 32.6 249 112-390 10-278 (330)
18 3iz6_a 40S ribosomal protein R 100.0 1.4E-39 4.7E-44 288.9 32.4 246 111-391 61-374 (380)
19 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.8E-39 1.3E-43 282.3 33.9 247 112-390 11-281 (345)
20 2pbi_B Guanine nucleotide-bind 100.0 8E-39 2.7E-43 281.1 35.2 246 110-391 58-314 (354)
21 3bg1_A Protein SEC13 homolog; 100.0 3.5E-40 1.2E-44 285.3 25.8 250 111-390 8-291 (316)
22 3frx_A Guanine nucleotide-bind 100.0 1.3E-38 4.4E-43 275.9 34.9 237 111-390 12-265 (319)
23 1nr0_A Actin interacting prote 100.0 3E-39 1E-43 304.1 32.5 274 66-391 22-354 (611)
24 1erj_A Transcriptional repress 100.0 7.4E-39 2.5E-43 285.5 32.7 244 115-391 122-388 (393)
25 4ery_A WD repeat-containing pr 100.0 3.4E-38 1.2E-42 272.6 35.6 273 66-390 27-310 (312)
26 2xzm_R RACK1; ribosome, transl 100.0 6.2E-39 2.1E-43 280.9 30.6 259 91-390 46-338 (343)
27 4ery_A WD repeat-containing pr 100.0 3.2E-38 1.1E-42 272.8 34.1 243 110-391 17-267 (312)
28 2ymu_A WD-40 repeat protein; u 100.0 2.7E-38 9.1E-43 296.4 36.3 266 67-389 308-577 (577)
29 4g56_B MGC81050 protein; prote 100.0 7.2E-39 2.5E-43 281.6 27.3 243 113-391 39-300 (357)
30 4gga_A P55CDC, cell division c 100.0 2.2E-37 7.4E-42 278.7 36.7 262 92-390 123-393 (420)
31 2xzm_R RACK1; ribosome, transl 100.0 1.5E-37 5.1E-42 272.1 33.9 241 111-391 16-284 (343)
32 4aow_A Guanine nucleotide-bind 100.0 1.7E-37 5.7E-42 271.5 33.1 272 111-391 33-336 (340)
33 1nr0_A Actin interacting prote 100.0 2.3E-37 8E-42 291.2 34.3 273 66-390 63-395 (611)
34 1k8k_C P40, ARP2/3 complex 41 100.0 1.7E-37 5.8E-42 274.9 31.0 301 66-391 12-360 (372)
35 2pm9_A Protein WEB1, protein t 100.0 3E-38 1E-42 284.0 25.9 291 66-391 16-336 (416)
36 3jrp_A Fusion protein of prote 100.0 1E-36 3.5E-41 270.4 33.9 251 110-391 5-286 (379)
37 3dm0_A Maltose-binding peripla 100.0 1.7E-37 5.8E-42 296.8 30.8 259 91-391 402-692 (694)
38 2ymu_A WD-40 repeat protein; u 100.0 1.5E-36 5.1E-41 284.5 36.3 268 66-390 266-537 (577)
39 1erj_A Transcriptional repress 100.0 1.3E-36 4.5E-41 271.0 33.1 240 113-391 61-340 (393)
40 4ggc_A P55CDC, cell division c 100.0 3.8E-36 1.3E-40 260.3 34.9 275 68-391 31-314 (318)
41 3f3f_A Nucleoporin SEH1; struc 100.0 2.1E-36 7.3E-41 265.0 33.6 263 111-391 6-336 (351)
42 3k26_A Polycomb protein EED; W 100.0 4E-37 1.4E-41 271.7 28.5 290 92-391 42-365 (366)
43 1r5m_A SIR4-interacting protei 100.0 3.3E-36 1.1E-40 271.2 34.7 283 66-391 49-424 (425)
44 4aez_A CDC20, WD repeat-contai 100.0 2.5E-36 8.4E-41 270.2 33.4 261 91-391 110-379 (401)
45 1gxr_A ESG1, transducin-like e 100.0 6.7E-36 2.3E-40 260.8 35.0 240 112-391 47-295 (337)
46 1sq9_A Antiviral protein SKI8; 100.0 3.7E-36 1.3E-40 268.7 34.1 253 111-391 11-321 (397)
47 1gxr_A ESG1, transducin-like e 100.0 1.7E-35 5.9E-40 258.2 37.3 273 66-391 55-336 (337)
48 3ei3_B DNA damage-binding prot 100.0 1.8E-36 6.2E-41 269.5 31.5 275 66-391 77-381 (383)
49 3zwl_B Eukaryotic translation 100.0 8.5E-36 2.9E-40 263.4 34.8 270 110-391 26-345 (369)
50 3odt_A Protein DOA1; ubiquitin 100.0 1.9E-35 6.4E-40 255.3 34.6 265 66-391 22-295 (313)
51 3dwl_C Actin-related protein 2 100.0 2.4E-37 8.2E-42 274.5 23.1 298 66-390 15-377 (377)
52 2j04_B YDR362CP, TAU91; beta p 100.0 4.5E-37 1.5E-41 281.2 25.3 266 90-391 179-516 (524)
53 3dm0_A Maltose-binding peripla 100.0 3.8E-36 1.3E-40 287.4 32.7 241 112-391 378-631 (694)
54 4e54_B DNA damage-binding prot 100.0 6.4E-37 2.2E-41 276.8 24.8 243 113-391 116-429 (435)
55 4h5i_A Guanine nucleotide-exch 100.0 2E-35 6.7E-40 260.4 33.2 283 66-391 18-342 (365)
56 3i2n_A WD repeat-containing pr 100.0 7.9E-36 2.7E-40 262.6 29.0 285 66-391 22-352 (357)
57 2j04_B YDR362CP, TAU91; beta p 100.0 6.9E-37 2.4E-41 280.0 22.1 229 129-390 176-426 (524)
58 1sq9_A Antiviral protein SKI8; 100.0 1.6E-35 5.3E-40 264.7 30.1 268 91-391 33-394 (397)
59 3gre_A Serine/threonine-protei 100.0 2.2E-36 7.4E-41 273.8 24.3 279 66-389 67-437 (437)
60 3vl1_A 26S proteasome regulato 100.0 1.8E-35 6.3E-40 266.2 29.4 296 67-391 61-364 (420)
61 3v7d_B Cell division control p 100.0 1.4E-34 4.7E-39 264.0 35.0 260 111-391 116-380 (464)
62 1p22_A F-BOX/WD-repeat protein 100.0 3E-35 1E-39 266.0 30.0 269 68-391 137-413 (435)
63 2xyi_A Probable histone-bindin 100.0 3.2E-35 1.1E-39 265.2 29.9 252 111-391 123-409 (430)
64 1k8k_C P40, ARP2/3 complex 41 100.0 4.4E-35 1.5E-39 259.4 29.5 243 114-391 6-273 (372)
65 3ei3_B DNA damage-binding prot 100.0 1.1E-34 3.8E-39 258.0 30.4 240 112-391 69-338 (383)
66 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.2E-34 1.4E-38 259.3 34.7 263 68-391 123-390 (445)
67 1r5m_A SIR4-interacting protei 100.0 1.7E-34 5.7E-39 260.1 31.5 268 111-391 40-360 (425)
68 3jro_A Fusion protein of prote 100.0 4E-35 1.4E-39 282.0 29.1 250 111-391 4-284 (753)
69 2pm9_A Protein WEB1, protein t 100.0 3E-36 1E-40 270.9 19.8 280 66-391 71-413 (416)
70 3dw8_B Serine/threonine-protei 100.0 4.8E-35 1.6E-39 265.7 27.3 242 113-391 25-372 (447)
71 3dwl_C Actin-related protein 2 100.0 1.9E-36 6.4E-41 268.8 17.3 244 115-390 10-279 (377)
72 1p22_A F-BOX/WD-repeat protein 100.0 3.6E-34 1.2E-38 258.9 32.5 232 113-390 130-363 (435)
73 3mkq_A Coatomer beta'-subunit; 100.0 2E-34 6.8E-39 280.9 32.2 242 111-391 8-258 (814)
74 3v7d_B Cell division control p 100.0 1.1E-33 3.8E-38 258.0 34.4 259 91-391 139-420 (464)
75 3vl1_A 26S proteasome regulato 100.0 6.7E-35 2.3E-39 262.6 25.0 235 118-391 58-321 (420)
76 1yfq_A Cell cycle arrest prote 100.0 1.4E-34 4.7E-39 253.2 26.0 246 114-391 9-281 (342)
77 2pm7_B Protein transport prote 100.0 8.7E-34 3E-38 243.0 30.5 211 149-391 3-237 (297)
78 3i2n_A WD repeat-containing pr 100.0 7.9E-35 2.7E-39 256.2 24.6 248 113-391 15-290 (357)
79 4a11_B DNA excision repair pro 100.0 1E-33 3.4E-38 253.7 31.4 295 66-391 47-364 (408)
80 3odt_A Protein DOA1; ubiquitin 100.0 5.5E-34 1.9E-38 246.1 28.0 236 111-391 13-254 (313)
81 3bg1_A Protein SEC13 homolog; 100.0 7.3E-35 2.5E-39 251.9 21.7 256 49-346 4-293 (316)
82 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.8E-33 1.3E-37 253.1 33.9 252 91-391 176-441 (445)
83 3mmy_A MRNA export factor; mRN 100.0 2.4E-33 8.3E-38 247.6 31.2 268 110-389 33-343 (368)
84 3k26_A Polycomb protein EED; W 100.0 1.9E-34 6.4E-39 254.6 23.3 243 114-391 16-317 (366)
85 3sfz_A APAF-1, apoptotic pepti 100.0 4.1E-33 1.4E-37 283.2 36.0 241 110-390 609-911 (1249)
86 2aq5_A Coronin-1A; WD40 repeat 100.0 1.4E-33 4.8E-38 252.4 27.7 260 91-390 54-340 (402)
87 3dw8_B Serine/threonine-protei 100.0 1.8E-33 6E-38 255.3 28.5 276 66-390 32-444 (447)
88 3iz6_a 40S ribosomal protein R 100.0 4.3E-34 1.5E-38 253.6 23.5 220 140-391 50-279 (380)
89 3gre_A Serine/threonine-protei 100.0 3.7E-34 1.3E-38 259.1 23.3 241 113-391 60-358 (437)
90 3mkq_A Coatomer beta'-subunit; 100.0 6.4E-33 2.2E-37 270.2 33.5 275 66-390 17-300 (814)
91 3sfz_A APAF-1, apoptotic pepti 100.0 8.1E-33 2.8E-37 281.1 34.1 308 66-391 619-1033(1249)
92 1yfq_A Cell cycle arrest prote 100.0 5.7E-33 1.9E-37 242.9 28.5 269 66-384 15-315 (342)
93 2aq5_A Coronin-1A; WD40 repeat 100.0 3.2E-33 1.1E-37 250.1 27.2 239 120-391 38-298 (402)
94 2oaj_A Protein SNI1; WD40 repe 100.0 2E-33 6.7E-38 274.0 25.5 303 66-391 62-604 (902)
95 1pgu_A Actin interacting prote 100.0 2.9E-32 1E-36 257.2 32.5 238 114-391 16-282 (615)
96 2oaj_A Protein SNI1; WD40 repe 100.0 2.3E-32 8E-37 266.5 32.0 248 112-390 13-310 (902)
97 1pgu_A Actin interacting prote 100.0 2.9E-32 1E-36 257.3 30.9 270 66-391 68-365 (615)
98 4gq1_A NUP37; propeller, trans 100.0 1.4E-32 4.9E-37 244.8 26.5 263 115-390 88-387 (393)
99 4aez_A CDC20, WD repeat-contai 100.0 9.1E-32 3.1E-36 240.6 31.1 236 114-391 89-335 (401)
100 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.9E-31 1E-35 240.9 31.7 243 114-390 100-389 (450)
101 2j04_A TAU60, YPL007P, hypothe 100.0 1.4E-32 4.7E-37 246.0 22.5 261 66-390 19-295 (588)
102 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.2E-30 7.7E-35 235.0 33.4 238 117-390 5-337 (450)
103 3lrv_A PRE-mRNA-splicing facto 100.0 5.1E-32 1.7E-36 237.0 21.4 226 126-390 48-290 (343)
104 4e54_B DNA damage-binding prot 100.0 2.4E-32 8.3E-37 246.8 19.8 209 150-391 114-326 (435)
105 3jrp_A Fusion protein of prote 100.0 9.9E-31 3.4E-35 231.8 28.6 213 147-391 3-239 (379)
106 2w18_A PALB2, fancn, partner a 100.0 3.5E-30 1.2E-34 216.7 27.6 235 118-391 41-356 (356)
107 4aow_A Guanine nucleotide-bind 100.0 1E-29 3.5E-34 222.0 30.5 208 148-391 31-245 (340)
108 3vu4_A KMHSV2; beta-propeller 100.0 6E-30 2E-34 224.7 28.1 231 111-391 14-270 (355)
109 3f3f_A Nucleoporin SEH1; struc 100.0 9.2E-30 3.1E-34 222.7 28.2 218 150-391 6-248 (351)
110 4h5i_A Guanine nucleotide-exch 100.0 7.7E-30 2.6E-34 224.7 27.2 226 90-346 100-343 (365)
111 2xyi_A Probable histone-bindin 100.0 1E-29 3.5E-34 229.2 26.8 217 149-391 122-352 (430)
112 3lrv_A PRE-mRNA-splicing facto 100.0 5.9E-30 2E-34 223.9 23.4 250 91-388 55-329 (343)
113 3zwl_B Eukaryotic translation 100.0 3.8E-29 1.3E-33 220.7 28.0 205 147-391 24-248 (369)
114 4a11_B DNA excision repair pro 100.0 8.3E-29 2.8E-33 221.7 29.6 240 112-391 39-322 (408)
115 4gga_A P55CDC, cell division c 100.0 2.5E-29 8.7E-34 226.1 25.6 238 66-348 151-397 (420)
116 3mmy_A MRNA export factor; mRN 100.0 1.2E-28 4E-33 217.5 27.8 215 144-391 28-303 (368)
117 2j04_A TAU60, YPL007P, hypothe 100.0 9.6E-29 3.3E-33 221.3 26.2 229 114-381 83-350 (588)
118 3jro_A Fusion protein of prote 100.0 5.8E-29 2E-33 239.2 26.5 211 149-391 3-237 (753)
119 3vu4_A KMHSV2; beta-propeller 100.0 3.5E-28 1.2E-32 213.4 28.0 280 66-390 23-334 (355)
120 1l0q_A Surface layer protein; 100.0 3.2E-27 1.1E-31 210.4 33.2 254 92-391 10-274 (391)
121 3bws_A Protein LP49; two-domai 100.0 1.7E-27 6E-32 215.0 31.8 272 67-391 127-431 (433)
122 4ggc_A P55CDC, cell division c 100.0 4.8E-27 1.6E-31 203.1 32.1 230 119-391 28-272 (318)
123 2w18_A PALB2, fancn, partner a 100.0 9.3E-28 3.2E-32 202.1 22.0 176 135-344 156-355 (356)
124 4gq1_A NUP37; propeller, trans 100.0 4.2E-28 1.4E-32 216.0 19.4 241 91-344 108-387 (393)
125 3bws_A Protein LP49; two-domai 100.0 4.7E-26 1.6E-30 205.6 28.4 234 116-391 122-389 (433)
126 1l0q_A Surface layer protein; 100.0 2.5E-25 8.6E-30 198.1 31.7 220 128-391 4-232 (391)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.5E-25 5E-30 200.7 24.8 252 95-390 94-385 (415)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 3.7E-22 1.3E-26 178.6 29.3 232 94-371 159-408 (415)
129 2oit_A Nucleoporin 214KDA; NH2 99.9 4E-23 1.4E-27 185.5 20.6 223 136-391 23-277 (434)
130 1ri6_A Putative isomerase YBHE 99.9 9.7E-22 3.3E-26 171.5 26.6 264 92-390 13-306 (343)
131 2ojh_A Uncharacterized protein 99.9 1.1E-21 3.6E-26 167.4 24.2 250 92-382 20-292 (297)
132 1ri6_A Putative isomerase YBHE 99.9 4.2E-21 1.4E-25 167.5 28.1 233 128-391 7-261 (343)
133 1nir_A Nitrite reductase; hemo 99.9 8E-21 2.7E-25 175.2 28.1 226 125-390 148-400 (543)
134 2ecf_A Dipeptidyl peptidase IV 99.9 7.5E-22 2.6E-26 190.3 22.1 231 118-390 110-411 (741)
135 3u4y_A Uncharacterized protein 99.9 1.4E-20 4.9E-25 163.4 28.1 242 115-391 39-303 (331)
136 2ojh_A Uncharacterized protein 99.9 1.7E-21 5.7E-26 166.1 21.4 221 132-391 18-257 (297)
137 2oit_A Nucleoporin 214KDA; NH2 99.9 1E-21 3.5E-26 176.4 20.8 196 118-347 38-279 (434)
138 1nir_A Nitrite reductase; hemo 99.9 1.2E-20 4.1E-25 174.0 27.5 258 92-391 157-457 (543)
139 1jmx_B Amine dehydrogenase; ox 99.9 2.1E-20 7.2E-25 163.4 25.6 223 126-391 11-324 (349)
140 3vgz_A Uncharacterized protein 99.9 9.7E-20 3.3E-24 159.5 28.9 234 116-391 40-302 (353)
141 3hfq_A Uncharacterized protein 99.9 4.5E-20 1.5E-24 161.4 26.5 243 115-390 38-315 (347)
142 2ecf_A Dipeptidyl peptidase IV 99.9 1.2E-20 4.2E-25 181.8 23.0 242 116-390 36-365 (741)
143 1pby_B Quinohemoprotein amine 99.9 1.2E-19 4.1E-24 157.8 26.7 218 127-391 2-309 (337)
144 3u4y_A Uncharacterized protein 99.9 1.1E-19 3.7E-24 157.9 25.3 227 127-391 11-251 (331)
145 3o4h_A Acylamino-acid-releasin 99.9 1.3E-20 4.6E-25 176.4 20.4 228 117-390 22-274 (582)
146 2z3z_A Dipeptidyl aminopeptida 99.9 3E-20 1E-24 178.1 21.1 239 117-390 82-389 (706)
147 1xfd_A DIP, dipeptidyl aminope 99.9 3.6E-20 1.2E-24 178.1 21.2 301 66-390 20-391 (723)
148 2z3z_A Dipeptidyl aminopeptida 99.8 2.6E-19 9.1E-24 171.5 25.0 273 66-391 85-434 (706)
149 1xfd_A DIP, dipeptidyl aminope 99.8 4.5E-20 1.6E-24 177.4 19.3 232 119-389 19-341 (723)
150 1k32_A Tricorn protease; prote 99.8 1.3E-19 4.4E-24 180.7 21.8 235 111-391 198-460 (1045)
151 3vgz_A Uncharacterized protein 99.8 6.4E-18 2.2E-22 147.9 28.1 223 118-381 90-334 (353)
152 3scy_A Hypothetical bacterial 99.8 2.3E-17 7.9E-22 145.0 31.2 252 115-390 48-335 (361)
153 1k32_A Tricorn protease; prote 99.8 2.3E-18 7.9E-23 171.7 26.4 249 94-390 224-500 (1045)
154 3hfq_A Uncharacterized protein 99.8 3E-17 1E-21 143.4 28.4 224 135-390 15-269 (347)
155 1jof_A Carboxy-CIS,CIS-muconat 99.8 6.9E-18 2.4E-22 148.5 24.0 242 118-390 41-339 (365)
156 3o4h_A Acylamino-acid-releasin 99.8 5.8E-18 2E-22 158.5 24.4 261 66-390 25-313 (582)
157 1q7f_A NHL, brain tumor CG1071 99.8 5.3E-16 1.8E-20 131.6 32.3 233 114-390 27-278 (286)
158 3scy_A Hypothetical bacterial 99.8 2.2E-16 7.7E-21 138.7 30.3 241 128-390 15-289 (361)
159 1pby_B Quinohemoprotein amine 99.8 1.2E-16 4.2E-21 138.7 24.6 227 118-359 35-320 (337)
160 3fvz_A Peptidyl-glycine alpha- 99.8 5.2E-16 1.8E-20 134.4 28.4 235 116-390 23-320 (329)
161 1z68_A Fibroblast activation p 99.7 6.3E-18 2.2E-22 162.3 12.0 238 121-390 20-344 (719)
162 1z68_A Fibroblast activation p 99.7 2.6E-17 9E-22 158.0 16.1 278 66-390 19-389 (719)
163 3azo_A Aminopeptidase; POP fam 99.7 1.1E-15 3.8E-20 145.3 23.7 244 111-389 18-320 (662)
164 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.5E-14 5.3E-19 127.1 26.4 230 128-390 4-289 (365)
165 2xdw_A Prolyl endopeptidase; a 99.7 3.2E-14 1.1E-18 136.2 30.0 247 115-390 123-412 (710)
166 1jmx_B Amine dehydrogenase; ox 99.7 3.5E-15 1.2E-19 130.2 21.4 221 118-348 44-327 (349)
167 3no2_A Uncharacterized protein 99.7 7.4E-14 2.5E-18 117.2 28.0 209 126-379 5-230 (276)
168 4a5s_A Dipeptidyl peptidase 4 99.7 2.2E-15 7.4E-20 144.9 20.0 241 119-390 19-351 (740)
169 3pe7_A Oligogalacturonate lyas 99.7 1.1E-14 3.8E-19 129.1 23.0 232 122-391 41-328 (388)
170 3e5z_A Putative gluconolactona 99.7 4.6E-14 1.6E-18 120.2 25.9 225 115-384 26-279 (296)
171 1rwi_B Serine/threonine-protei 99.7 1.1E-13 3.7E-18 116.2 27.4 231 118-390 25-262 (270)
172 2dg1_A DRP35, lactonase; beta 99.7 2.2E-14 7.7E-19 124.4 23.6 235 118-390 7-261 (333)
173 2gop_A Trilobed protease; beta 99.7 7.4E-14 2.5E-18 121.8 26.7 220 117-390 15-289 (347)
174 2dg1_A DRP35, lactonase; beta 99.7 5E-13 1.7E-17 115.8 31.4 229 114-381 42-300 (333)
175 3azo_A Aminopeptidase; POP fam 99.6 9.9E-15 3.4E-19 138.8 20.7 258 93-388 46-363 (662)
176 3pe7_A Oligogalacturonate lyas 99.6 4.2E-14 1.4E-18 125.4 22.7 210 142-391 16-272 (388)
177 3dsm_A Uncharacterized protein 99.6 4E-13 1.4E-17 116.1 26.2 231 117-390 44-300 (328)
178 2oiz_A Aromatic amine dehydrog 99.6 2.6E-14 8.9E-19 125.2 18.9 241 134-391 29-333 (361)
179 2bkl_A Prolyl endopeptidase; m 99.6 3.8E-14 1.3E-18 135.3 20.6 239 114-390 118-395 (695)
180 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 7.1E-13 2.4E-17 113.8 24.3 232 118-390 19-297 (314)
181 4a5s_A Dipeptidyl peptidase 4 99.6 4.9E-14 1.7E-18 135.5 18.6 195 156-390 17-292 (740)
182 1q7f_A NHL, brain tumor CG1071 99.6 4E-12 1.4E-16 107.6 27.7 193 114-346 74-280 (286)
183 2z2n_A Virginiamycin B lyase; 99.6 2.7E-11 9.1E-16 103.0 33.0 234 115-390 13-253 (299)
184 3c5m_A Oligogalacturonate lyas 99.6 3.8E-14 1.3E-18 125.9 15.4 225 122-390 86-380 (396)
185 1xip_A Nucleoporin NUP159; bet 99.6 9.9E-14 3.4E-18 120.6 17.4 177 157-379 39-231 (388)
186 3c5m_A Oligogalacturonate lyas 99.6 7.2E-14 2.5E-18 124.1 17.1 229 118-390 37-327 (396)
187 2oiz_A Aromatic amine dehydrog 99.5 9.2E-12 3.2E-16 108.9 28.1 239 121-373 54-360 (361)
188 3fvz_A Peptidyl-glycine alpha- 99.5 5.7E-12 1.9E-16 109.0 25.3 193 115-345 89-321 (329)
189 3dsm_A Uncharacterized protein 99.5 7.6E-12 2.6E-16 108.0 25.9 212 134-390 15-251 (328)
190 2gop_A Trilobed protease; beta 99.5 3.5E-12 1.2E-16 111.1 23.6 218 117-390 59-329 (347)
191 1yr2_A Prolyl oligopeptidase; 99.5 4E-12 1.4E-16 122.2 25.1 242 115-390 161-439 (741)
192 3e5z_A Putative gluconolactona 99.5 9.7E-12 3.3E-16 105.8 24.1 206 146-390 18-244 (296)
193 2z2n_A Virginiamycin B lyase; 99.5 3.3E-10 1.1E-14 96.2 33.3 231 116-390 56-293 (299)
194 1qks_A Cytochrome CD1 nitrite 99.5 6.9E-11 2.4E-15 108.9 30.4 225 126-390 167-419 (567)
195 2qc5_A Streptogramin B lactona 99.5 7.9E-10 2.7E-14 93.9 33.5 233 116-390 19-258 (300)
196 3hrp_A Uncharacterized protein 99.5 1.9E-10 6.3E-15 102.2 29.5 234 117-390 131-408 (409)
197 3g4e_A Regucalcin; six bladed 99.4 1.7E-10 5.9E-15 98.0 27.2 225 118-382 14-263 (297)
198 3no2_A Uncharacterized protein 99.4 4.8E-11 1.6E-15 100.1 22.0 179 169-390 4-193 (276)
199 2xdw_A Prolyl endopeptidase; a 99.4 5.5E-11 1.9E-15 113.8 25.1 201 154-390 123-366 (710)
200 2bkl_A Prolyl endopeptidase; m 99.4 3.4E-11 1.2E-15 115.0 22.9 201 153-390 118-347 (695)
201 3iuj_A Prolyl endopeptidase; h 99.4 4.9E-11 1.7E-15 113.7 22.8 239 115-390 127-403 (693)
202 1rwi_B Serine/threonine-protei 99.4 6.2E-11 2.1E-15 99.2 20.9 194 117-347 67-265 (270)
203 1xip_A Nucleoporin NUP159; bet 99.4 6.2E-12 2.1E-16 109.3 14.8 167 118-333 39-231 (388)
204 2mad_H Methylamine dehydrogena 99.4 2.2E-09 7.7E-14 93.9 29.7 240 137-391 48-349 (373)
205 2qc5_A Streptogramin B lactona 99.4 4.6E-09 1.6E-13 89.1 31.0 232 116-390 61-298 (300)
206 2ghs_A AGR_C_1268P; regucalcin 99.3 1.8E-09 6.2E-14 93.0 27.3 222 119-382 51-293 (326)
207 3dr2_A Exported gluconolactona 99.3 2.6E-09 9.1E-14 91.1 24.4 228 115-389 43-303 (305)
208 1qks_A Cytochrome CD1 nitrite 99.3 3.7E-09 1.3E-13 97.4 26.3 189 168-391 165-372 (567)
209 3hrp_A Uncharacterized protein 99.3 3E-09 1E-13 94.4 24.6 194 156-390 131-352 (409)
210 1yr2_A Prolyl oligopeptidase; 99.2 1.3E-09 4.4E-14 104.8 23.0 199 154-390 161-391 (741)
211 3sjl_D Methylamine dehydrogena 99.2 7.5E-10 2.6E-14 95.9 19.2 254 125-391 43-362 (386)
212 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 5.2E-09 1.8E-13 89.5 21.7 198 115-346 69-299 (314)
213 2hz6_A Endoplasmic reticulum t 99.2 2.2E-11 7.4E-16 106.8 6.0 200 123-370 6-213 (369)
214 2hz6_A Endoplasmic reticulum t 99.1 1.7E-11 5.9E-16 107.4 3.0 180 169-391 8-191 (369)
215 3g4e_A Regucalcin; six bladed 99.1 2.4E-07 8.3E-12 78.5 28.1 199 154-390 11-227 (297)
216 3c75_H MADH, methylamine dehyd 99.1 3.8E-09 1.3E-13 93.2 17.0 243 136-391 99-401 (426)
217 3hxj_A Pyrrolo-quinoline quino 99.1 3.4E-08 1.2E-12 85.0 22.5 216 125-390 106-322 (330)
218 3dr2_A Exported gluconolactona 99.1 1.8E-08 6.3E-13 85.8 20.0 205 145-390 34-265 (305)
219 1mda_H Methylamine dehydrogena 99.1 1.9E-08 6.4E-13 87.3 19.4 245 128-391 34-345 (368)
220 2ghs_A AGR_C_1268P; regucalcin 99.0 1.3E-07 4.5E-12 81.3 24.1 193 158-390 51-258 (326)
221 2qe8_A Uncharacterized protein 99.0 1.7E-07 5.8E-12 81.2 24.3 254 117-384 17-313 (343)
222 3sjl_D Methylamine dehydrogena 99.0 9.8E-07 3.3E-11 76.5 26.0 234 122-370 83-383 (386)
223 3q7m_A Lipoprotein YFGL, BAMB; 99.0 8.5E-07 2.9E-11 77.9 26.4 233 120-391 97-336 (376)
224 2mad_H Methylamine dehydrogena 99.0 1.6E-06 5.6E-11 75.7 27.6 204 120-348 128-352 (373)
225 2ece_A 462AA long hypothetical 98.9 2.7E-07 9.4E-12 80.6 21.5 192 168-390 93-350 (462)
226 1kb0_A Quinohemoprotein alcoho 98.9 1E-07 3.5E-12 90.2 20.0 227 122-391 124-506 (677)
227 1yiq_A Quinohemoprotein alcoho 98.9 1.4E-07 4.9E-12 89.4 20.6 231 123-391 118-504 (689)
228 3q7m_A Lipoprotein YFGL, BAMB; 98.9 1.8E-06 6.1E-11 75.8 26.4 218 124-390 51-294 (376)
229 2iwa_A Glutamine cyclotransfer 98.9 3.5E-06 1.2E-10 69.1 25.4 191 158-390 23-235 (266)
230 1kb0_A Quinohemoprotein alcoho 98.9 3.3E-07 1.1E-11 86.7 21.5 81 296-379 457-538 (677)
231 3iuj_A Prolyl endopeptidase; h 98.9 7.9E-08 2.7E-12 91.6 17.4 199 154-390 127-357 (693)
232 2qe8_A Uncharacterized protein 98.9 9.2E-08 3.1E-12 82.9 16.3 197 156-390 17-276 (343)
233 3hxj_A Pyrrolo-quinoline quino 98.8 1.8E-07 6E-12 80.5 17.1 220 118-390 61-282 (330)
234 3c75_H MADH, methylamine dehyd 98.8 1.8E-06 6.2E-11 76.2 23.5 221 121-356 122-409 (426)
235 1yiq_A Quinohemoprotein alcoho 98.8 4.7E-07 1.6E-11 85.9 21.2 84 295-381 454-538 (689)
236 2ece_A 462AA long hypothetical 98.8 1.9E-06 6.3E-11 75.5 22.8 215 128-379 98-399 (462)
237 3nol_A Glutamine cyclotransfer 98.7 1.3E-05 4.5E-10 64.9 23.0 183 153-380 38-244 (262)
238 1npe_A Nidogen, entactin; glyc 98.7 3.2E-05 1.1E-09 64.1 26.0 215 118-372 37-262 (267)
239 2fp8_A Strictosidine synthase; 98.7 3.3E-05 1.1E-09 66.0 26.6 227 121-390 23-311 (322)
240 1fwx_A Nitrous oxide reductase 98.7 7.1E-06 2.4E-10 74.4 22.4 93 296-390 254-359 (595)
241 3nok_A Glutaminyl cyclase; bet 98.7 3.9E-05 1.3E-09 62.2 24.3 179 158-380 57-254 (268)
242 2p4o_A Hypothetical protein; p 98.7 7E-05 2.4E-09 63.5 27.5 233 118-380 33-277 (306)
243 4a2l_A BT_4663, two-component 98.7 0.00011 3.9E-09 71.1 32.3 238 116-390 214-478 (795)
244 2iwa_A Glutamine cyclotransfer 98.6 2.3E-05 7.7E-10 64.3 22.7 189 118-346 22-237 (266)
245 3mbr_X Glutamine cyclotransfer 98.6 5.9E-05 2E-09 60.6 23.7 184 153-380 16-223 (243)
246 1npe_A Nidogen, entactin; glyc 98.6 7.1E-05 2.4E-09 62.1 25.5 220 128-390 3-236 (267)
247 1mda_H Methylamine dehydrogena 98.6 5.6E-06 1.9E-10 71.8 18.2 231 121-370 69-366 (368)
248 4a2l_A BT_4663, two-component 98.6 0.00018 6.2E-09 69.7 30.6 237 116-390 262-524 (795)
249 3nol_A Glutamine cyclotransfer 98.6 2.9E-05 9.9E-10 62.9 20.7 176 118-335 44-244 (262)
250 3nok_A Glutaminyl cyclase; bet 98.5 3E-05 1E-09 62.8 20.3 174 118-334 56-253 (268)
251 3mbr_X Glutamine cyclotransfer 98.5 0.00016 5.6E-09 58.0 23.3 175 118-334 22-222 (243)
252 2xbg_A YCF48-like protein; pho 98.5 0.00023 7.8E-09 61.0 25.9 232 116-389 79-319 (327)
253 3v9f_A Two-component system se 98.5 0.00026 8.9E-09 68.5 28.9 237 116-390 257-522 (781)
254 2fp8_A Strictosidine synthase; 98.4 8.3E-05 2.9E-09 63.6 22.4 187 157-381 20-248 (322)
255 3v64_C Agrin; beta propeller, 98.4 0.00058 2E-08 59.0 27.6 230 118-389 35-272 (349)
256 1kv9_A Type II quinohemoprotei 98.4 1.3E-05 4.5E-10 75.8 18.3 226 123-391 114-487 (668)
257 1fwx_A Nitrous oxide reductase 98.4 2.4E-05 8.3E-10 71.0 18.5 240 125-380 100-406 (595)
258 3v9f_A Two-component system se 98.4 0.0009 3.1E-08 64.7 30.4 235 115-390 311-566 (781)
259 2ad6_A Methanol dehydrogenase 98.4 6.2E-05 2.1E-09 69.7 20.5 98 289-391 319-493 (571)
260 3v65_B Low-density lipoprotein 98.3 0.0013 4.4E-08 57.7 27.5 228 120-389 80-315 (386)
261 3p5b_L Low density lipoprotein 98.3 0.0017 5.9E-08 57.1 29.2 227 128-389 85-317 (400)
262 1kv9_A Type II quinohemoprotei 98.3 0.00018 6.2E-09 68.0 22.1 61 294-357 436-496 (668)
263 1k3i_A Galactose oxidase precu 98.2 0.00012 4E-09 69.3 20.4 236 125-390 197-495 (656)
264 1ijq_A LDL receptor, low-densi 98.2 0.0016 5.6E-08 55.3 29.5 219 136-389 10-235 (316)
265 1flg_A Protein (quinoprotein e 98.2 0.00037 1.3E-08 64.6 21.9 27 288-314 338-364 (582)
266 3amr_A 3-phytase; beta-propell 98.1 0.0023 7.7E-08 54.3 23.2 191 165-390 35-261 (355)
267 2p9w_A MAL S 1 allergenic prot 98.1 0.0011 3.9E-08 55.6 20.4 160 200-391 8-214 (334)
268 2ad6_A Methanol dehydrogenase 98.1 0.00066 2.3E-08 62.8 20.8 61 294-357 442-502 (571)
269 1w6s_A Methanol dehydrogenase 98.1 0.0011 3.8E-08 61.5 22.1 26 288-313 325-350 (599)
270 4hw6_A Hypothetical protein, I 98.0 0.006 2E-07 54.3 27.1 233 119-390 141-431 (433)
271 3tc9_A Hypothetical hydrolase; 98.0 0.006 2E-07 54.3 27.0 232 119-390 139-428 (430)
272 3amr_A 3-phytase; beta-propell 98.0 0.0028 9.5E-08 53.8 22.2 195 126-345 40-262 (355)
273 1flg_A Protein (quinoprotein e 98.0 0.0014 4.8E-08 60.7 21.2 83 295-380 465-548 (582)
274 3m0c_C LDL receptor, low-densi 98.0 0.0063 2.2E-07 58.3 26.0 221 134-389 402-629 (791)
275 2xe4_A Oligopeptidase B; hydro 97.9 0.0083 2.8E-07 57.6 26.4 192 118-344 175-398 (751)
276 3qqz_A Putative uncharacterize 97.9 0.0057 1.9E-07 49.8 28.2 197 115-343 25-250 (255)
277 2p4o_A Hypothetical protein; p 97.9 0.0038 1.3E-07 52.7 21.2 163 194-390 22-196 (306)
278 1w6s_A Methanol dehydrogenase 97.9 0.0019 6.6E-08 59.8 20.3 84 294-380 451-535 (599)
279 3sov_A LRP-6, low-density lipo 97.8 0.011 3.6E-07 50.3 24.7 216 135-390 12-236 (318)
280 3tc9_A Hypothetical hydrolase; 97.8 0.0011 3.8E-08 59.0 17.0 152 206-390 138-299 (430)
281 3v64_C Agrin; beta propeller, 97.8 0.012 4.1E-07 50.7 22.9 175 179-390 52-232 (349)
282 3qqz_A Putative uncharacterize 97.8 0.0094 3.2E-07 48.5 25.0 208 150-388 21-249 (255)
283 3ei3_A DNA damage-binding prot 97.8 0.038 1.3E-06 55.4 30.9 76 116-192 553-639 (1158)
284 2xe4_A Oligopeptidase B; hydro 97.8 0.0012 4.1E-08 63.4 18.0 192 157-388 175-394 (751)
285 3v65_B Low-density lipoprotein 97.8 0.0075 2.6E-07 52.8 21.4 175 179-390 95-275 (386)
286 1k3i_A Galactose oxidase precu 97.7 0.00066 2.2E-08 64.2 15.0 191 160-382 190-420 (656)
287 2xbg_A YCF48-like protein; pho 97.7 0.016 5.6E-07 49.3 24.9 228 117-386 36-273 (327)
288 1ijq_A LDL receptor, low-densi 97.6 0.025 8.5E-07 47.9 25.4 179 179-390 9-193 (316)
289 3sov_A LRP-6, low-density lipo 97.5 0.032 1.1E-06 47.2 22.1 178 179-390 12-195 (318)
290 4hw6_A Hypothetical protein, I 97.5 0.039 1.3E-06 49.1 22.4 193 157-389 140-371 (433)
291 1n7d_A LDL receptor, low-densi 97.5 0.00067 2.3E-08 64.4 11.4 221 135-390 385-612 (699)
292 2vpj_A Kelch-like protein 12; 97.5 0.012 4.3E-07 49.3 18.3 223 125-390 14-276 (301)
293 2xn4_A Kelch-like protein 2; s 97.5 0.015 5.2E-07 48.8 18.7 222 126-390 16-274 (302)
294 3p5b_L Low density lipoprotein 97.4 0.067 2.3E-06 46.9 29.8 198 115-348 110-322 (400)
295 3m0c_C LDL receptor, low-densi 97.3 0.12 4.3E-06 49.5 27.7 198 115-348 422-634 (791)
296 3sre_A PON1, serum paraoxonase 97.3 0.064 2.2E-06 45.9 24.7 176 178-382 81-287 (355)
297 3sre_A PON1, serum paraoxonase 97.3 0.066 2.2E-06 45.9 22.4 179 134-345 81-297 (355)
298 3ii7_A Kelch-like protein 7; p 97.3 0.06 2E-06 45.2 20.7 221 128-390 14-270 (306)
299 2ism_A Putative oxidoreductase 97.3 0.076 2.6E-06 45.7 24.3 240 118-383 32-337 (352)
300 1zgk_A Kelch-like ECH-associat 97.2 0.021 7.3E-07 48.1 16.6 227 121-390 20-285 (308)
301 3kya_A Putative phosphatase; s 97.1 0.019 6.4E-07 51.5 14.8 153 206-389 140-338 (496)
302 4a0p_A LRP6, LRP-6, low-densit 97.0 0.21 7.1E-06 46.7 27.8 215 134-389 13-234 (628)
303 2p9w_A MAL S 1 allergenic prot 97.0 0.11 3.9E-06 43.6 21.2 160 154-346 11-215 (334)
304 3s94_A LRP-6, low-density lipo 97.0 0.23 8E-06 46.3 25.7 217 134-390 16-241 (619)
305 3ei3_A DNA damage-binding prot 96.9 0.36 1.2E-05 48.5 24.3 112 274-389 884-996 (1158)
306 2xzh_A Clathrin heavy chain 1; 96.9 0.16 5.3E-06 42.6 26.2 218 126-386 78-326 (365)
307 2g8s_A Glucose/sorbosone dehyd 96.8 0.2 6.8E-06 43.1 26.1 246 119-385 20-347 (353)
308 1bpo_A Protein (clathrin); cla 96.8 0.23 7.7E-06 43.4 26.1 217 127-386 78-325 (494)
309 2xn4_A Kelch-like protein 2; s 96.8 0.098 3.3E-06 43.8 16.8 188 122-348 58-278 (302)
310 1n7d_A LDL receptor, low-densi 96.8 0.0069 2.4E-07 57.5 10.1 193 118-348 407-616 (699)
311 3pbp_A Nucleoporin NUP82; beta 96.7 0.051 1.8E-06 47.2 14.1 105 285-391 31-157 (452)
312 3s94_A LRP-6, low-density lipo 96.6 0.47 1.6E-05 44.2 22.6 195 117-348 40-245 (619)
313 2vpj_A Kelch-like protein 12; 96.6 0.26 8.9E-06 41.1 20.1 189 121-348 58-280 (301)
314 3kya_A Putative phosphatase; s 96.6 0.41 1.4E-05 43.0 26.3 244 118-390 140-473 (496)
315 4asc_A Kelch repeat and BTB do 96.5 0.26 9E-06 41.4 17.7 92 285-382 148-253 (315)
316 4a0p_A LRP6, LRP-6, low-densit 96.5 0.55 1.9E-05 43.9 25.7 194 117-348 37-239 (628)
317 3a9g_A Putative uncharacterize 96.3 0.45 1.5E-05 40.9 27.7 237 118-380 30-330 (354)
318 3ii7_A Kelch-like protein 7; p 96.3 0.39 1.3E-05 40.1 19.6 189 121-348 51-274 (306)
319 1zgk_A Kelch-like ECH-associat 96.2 0.31 1.1E-05 40.8 16.2 188 123-348 68-289 (308)
320 2uvk_A YJHT; unknown function, 96.1 0.44 1.5E-05 40.8 17.0 94 123-225 17-128 (357)
321 4asc_A Kelch repeat and BTB do 96.1 0.46 1.6E-05 39.9 16.7 107 121-236 41-175 (315)
322 2woz_A Kelch repeat and BTB do 96.1 0.48 1.6E-05 39.9 16.7 82 296-382 175-263 (318)
323 3pbp_A Nucleoporin NUP82; beta 96.0 0.71 2.4E-05 40.3 21.7 110 277-387 67-207 (452)
324 1tl2_A L10, protein (tachylect 95.8 0.53 1.8E-05 37.0 18.0 149 205-385 41-203 (236)
325 2be1_A Serine/threonine-protei 95.7 0.84 2.9E-05 38.7 17.4 109 126-239 10-134 (339)
326 2uvk_A YJHT; unknown function, 95.6 0.66 2.3E-05 39.7 16.1 54 121-179 61-128 (357)
327 1xi4_A Clathrin heavy chain; a 95.5 0.71 2.4E-05 46.8 17.1 177 134-348 84-291 (1630)
328 1tl2_A L10, protein (tachylect 95.5 0.15 5E-06 40.1 10.0 105 276-386 41-157 (236)
329 2zwa_A Leucine carboxyl methyl 95.5 0.72 2.5E-05 43.7 16.8 191 169-390 397-633 (695)
330 3a9g_A Putative uncharacterize 95.4 0.34 1.2E-05 41.6 13.3 103 276-380 29-153 (354)
331 3ott_A Two-component system se 95.4 2 6.8E-05 41.2 27.3 220 116-389 21-257 (758)
332 2woz_A Kelch repeat and BTB do 95.3 0.73 2.5E-05 38.7 15.1 105 123-236 54-185 (318)
333 2g8s_A Glucose/sorbosone dehyd 95.3 0.79 2.7E-05 39.3 15.3 30 205-234 18-47 (353)
334 2ism_A Putative oxidoreductase 95.2 1.3 4.5E-05 37.9 23.5 71 156-234 31-113 (352)
335 1cru_A Protein (soluble quinop 95.0 1.9 6.4E-05 38.4 20.8 104 204-334 26-162 (454)
336 3qhy_B Beta-lactamase inhibito 95.0 1.3 4.4E-05 36.6 15.7 216 118-389 25-243 (282)
337 1cru_A Protein (soluble quinop 94.0 3.1 0.00011 37.0 19.0 62 156-222 27-97 (454)
338 2zwa_A Leucine carboxyl methyl 93.9 1.1 3.7E-05 42.5 13.8 111 121-236 445-578 (695)
339 2xzh_A Clathrin heavy chain 1; 93.9 2.6 8.8E-05 35.5 14.5 103 135-237 179-292 (365)
340 3das_A Putative oxidoreductase 93.8 2.8 9.7E-05 35.6 18.9 153 197-378 24-218 (347)
341 1bpo_A Protein (clathrin); cla 92.0 5.9 0.0002 34.8 15.5 103 135-237 178-291 (494)
342 3ott_A Two-component system se 92.0 8.9 0.00031 36.6 32.3 256 117-389 146-445 (758)
343 2be1_A Serine/threonine-protei 91.6 0.78 2.7E-05 38.9 8.4 143 170-343 10-181 (339)
344 3das_A Putative oxidoreductase 90.4 7.7 0.00026 33.0 26.6 242 118-383 33-330 (347)
345 3s25_A Hypothetical 7-bladed b 89.2 8.6 0.00029 31.9 18.0 175 123-347 22-217 (302)
346 3sbq_A Nitrous-oxide reductase 86.9 14 0.0005 33.6 12.9 112 206-334 324-453 (638)
347 1xi4_A Clathrin heavy chain; a 86.3 33 0.0011 35.4 16.4 199 117-344 106-329 (1630)
348 3b7f_A Glycosyl hydrolase, BNR 86.3 15 0.00053 31.6 20.7 111 117-230 55-203 (394)
349 4gq2_M Nucleoporin NUP120; bet 85.1 18 0.0006 35.7 14.0 32 317-348 237-268 (950)
350 3sbq_A Nitrous-oxide reductase 83.6 5.7 0.00019 36.1 8.8 92 297-390 299-406 (638)
351 4gq2_M Nucleoporin NUP120; bet 82.0 41 0.0014 33.2 15.2 36 278-313 238-274 (950)
352 2wg3_C Hedgehog-interacting pr 81.6 28 0.00096 30.9 12.8 104 279-383 17-160 (463)
353 3b7f_A Glycosyl hydrolase, BNR 77.0 35 0.0012 29.3 20.8 105 277-383 116-254 (394)
354 3kci_A Probable E3 ubiquitin-p 74.8 40 0.0014 29.0 28.7 245 118-389 54-342 (389)
355 3f7f_A Nucleoporin NUP120; nuc 74.5 27 0.00092 32.9 10.6 38 276-314 222-259 (729)
356 3qhy_B Beta-lactamase inhibito 71.4 40 0.0014 27.5 16.5 198 118-370 64-263 (282)
357 4a9v_A PHOX; hydrolase, beta-p 64.8 37 0.0013 31.0 9.1 57 278-334 478-549 (592)
358 3zwu_A Alkaline phosphatase PH 57.9 47 0.0016 30.6 8.8 56 278-333 478-548 (592)
359 4fhn_B Nucleoporin NUP120; pro 57.8 21 0.00073 36.0 7.1 35 279-313 241-276 (1139)
360 1suu_A DNA gyrase subunit A; t 56.7 85 0.0029 26.0 21.6 192 126-345 8-230 (312)
361 3zwu_A Alkaline phosphatase PH 52.4 73 0.0025 29.3 9.1 58 318-378 478-548 (592)
362 4fhn_B Nucleoporin NUP120; pro 51.6 28 0.00097 35.1 6.9 31 318-348 240-270 (1139)
363 3kci_A Probable E3 ubiquitin-p 51.0 1.2E+02 0.004 26.0 23.0 238 125-389 9-290 (389)
364 3f7f_A Nucleoporin NUP120; nuc 47.1 34 0.0012 32.2 6.1 31 117-147 222-252 (729)
365 4a9v_A PHOX; hydrolase, beta-p 45.4 1.7E+02 0.0057 26.9 10.0 61 317-380 477-550 (592)
366 1wz3_A Autophagy 12B, ATG12B, 44.8 63 0.0022 21.3 5.5 77 14-101 11-90 (96)
367 1zi0_A DNA gyrase subunit A; b 44.8 1.3E+02 0.0045 24.8 22.5 190 127-344 4-224 (307)
368 4d9s_A UVB-resistance protein 42.3 1.7E+02 0.0057 25.3 30.9 243 117-389 68-354 (406)
369 1suu_A DNA gyrase subunit A; t 42.3 1.5E+02 0.005 24.6 21.8 198 169-390 7-229 (312)
370 3s25_A Hypothetical 7-bladed b 42.1 1.4E+02 0.0049 24.5 19.7 103 119-235 57-176 (302)
371 3q6k_A 43.2 kDa salivary prote 40.2 1.8E+02 0.0061 25.0 10.2 90 297-386 124-249 (381)
372 3uc1_A DNA gyrase subunit A; D 40.1 1.6E+02 0.0056 24.5 22.3 162 205-389 95-276 (327)
373 3mvd_K Regulator of chromosome 36.0 2.1E+02 0.0073 24.7 35.6 253 118-389 76-371 (423)
374 3lkx_A Transcription factor BT 32.1 14 0.00046 22.5 0.6 43 17-59 18-60 (66)
375 2cn3_A Xyloglucanase, beta-1,4 31.9 3.4E+02 0.011 25.7 23.4 106 118-224 24-152 (737)
376 3al9_A Plexin-A2; beta-propell 31.4 2.4E+02 0.008 25.6 8.9 72 158-230 402-476 (539)
377 4gdk_A Ubiquitin-like protein 31.0 1.1E+02 0.0038 19.9 9.4 80 15-102 4-86 (91)
378 3mcb_B Transcription factor BT 30.0 12 0.00041 22.0 0.2 39 17-55 18-56 (58)
379 4d9s_A UVB-resistance protein 29.6 2.7E+02 0.0092 23.9 31.2 241 117-389 16-302 (406)
380 3no0_A DNA gyrase subunit A; D 29.6 2.2E+02 0.0076 23.0 21.3 200 156-387 24-239 (276)
381 3l6v_A GYRA, DNA gyrase subuni 26.0 3.1E+02 0.011 23.4 21.8 151 126-304 7-179 (370)
382 1q47_A Semaphorin 3A; beta pro 24.6 2.2E+02 0.0076 25.5 7.4 77 265-341 393-487 (495)
383 1olz_A Semaphorin 4D; developm 22.8 3.3E+02 0.011 25.5 8.4 58 171-230 416-477 (663)
384 2eke_C Ubiquitin-like protein 22.8 1.8E+02 0.0061 19.5 6.0 72 13-98 28-99 (106)
385 4gz8_A Semaphorin-3A; multi-do 20.1 4.3E+02 0.015 24.8 8.5 60 171-230 430-495 (667)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.2e-44 Score=321.80 Aligned_cols=273 Identities=22% Similarity=0.380 Sum_probs=236.5
Q ss_pred eeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-
Q psy2107 67 QFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR- 143 (391)
Q Consensus 67 ~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~- 143 (391)
...|.+++.++.+ .+.++.+.+|....... ...+.+|.+.|++++|+ +++|++|+.||+|++||+
T Consensus 113 ~~~~~p~~~~l~s----------~s~Dg~i~vwd~~~~~~--~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 113 RVIFHPVFSVMVS----------ASEDATIKVWDYETGDF--ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp EEEECSSSSEEEE----------EESSSCEEEEETTTCCC--CEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred EEEEcCCCCEEEE----------EeCCCeEEEEECCCCcE--EEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 3467777766654 34688999998654332 34566899999999998 679999999999999999
Q ss_pred CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe
Q psy2107 144 RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG 223 (391)
Q Consensus 144 ~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~ 223 (391)
....+..+.+|...|.+++| ++++.+|++|+.|++|++||++ ...++..+.+|...|.+++++|++.+|++|+
T Consensus 181 ~~~~~~~~~~h~~~V~~v~~---~p~~~~l~s~s~D~~i~~wd~~----~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s 253 (410)
T 1vyh_C 181 GFECIRTMHGHDHNVSSVSI---MPNGDHIVSASRDKTIKMWEVQ----TGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253 (410)
T ss_dssp SSCEEECCCCCSSCEEEEEE---CSSSSEEEEEETTSEEEEEETT----TCCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred CCceeEEEcCCCCCEEEEEE---eCCCCEEEEEeCCCeEEEEECC----CCcEEEEEeCCCccEEEEEECCCCCEEEEEc
Confidence 45677788999999999999 7788999999999999999965 3457788899999999999999999999999
Q ss_pred CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc------------------
Q psy2107 224 WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA------------------ 285 (391)
Q Consensus 224 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------------------ 285 (391)
.||.|++||+++ ......+.+|...|.+++|+|
T Consensus 254 ~D~~v~vwd~~~-----------------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (410)
T 1vyh_C 254 NDQTVRVWVVAT-----------------------------KECKAELREHRHVVECISWAPESSYSSISEATGSETKKS 304 (410)
T ss_dssp TTSCEEEEETTT-----------------------------CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC----
T ss_pred CCCeEEEEECCC-----------------------------CceeeEecCCCceEEEEEEcCcccccchhhhcccccccc
Confidence 999999999976 335667889999999999986
Q ss_pred ---CCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccC
Q psy2107 286 ---VDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKE 361 (391)
Q Consensus 286 ---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~ 361 (391)
+..+++|+.|+.|++||++++.++..+.+|. .|.+++|+|++++|++|+.|+.|++||++..+ +...+.+|..
T Consensus 305 ~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~---~~~~~~~h~~ 381 (410)
T 1vyh_C 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR---CMKTLNAHEH 381 (410)
T ss_dssp ---CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC---CCEEEECCSS
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc---eEEEEcCCCC
Confidence 3469999999999999999999999998766 79999999999999999999999999998765 6678889999
Q ss_pred cEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 362 WVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 362 ~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
.|++++|+| ++.+|+||+.||+|++|++|
T Consensus 382 ~v~~l~~~~-~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 382 FVTSLDFHK-TAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp CEEEEEECS-SSSCEEEEETTSEEEEEC--
T ss_pred cEEEEEEcC-CCCEEEEEeCCCcEEEEeCC
Confidence 999999999 56679999999999999986
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.2e-43 Score=309.66 Aligned_cols=239 Identities=17% Similarity=0.283 Sum_probs=201.4
Q ss_pred cCCCCcEEEEEec-CCEEEEEECCCeEEEEcCC-CceEE----eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107 113 ILHDDWVSAIDFH-NDWILTGCYDHSVHIWTRR-GEHKL----NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE 186 (391)
Q Consensus 113 ~~h~~~V~~~~~~-~~~l~t~~~dg~i~iwd~~-~~~~~----~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd 186 (391)
..|...|++++|+ .+.|++|+.||+|+|||+. ++... ...+|.+.|++++| ++++.+|++|+.||+|++||
T Consensus 79 ~~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~---spdg~~l~sgs~d~~i~iwd 155 (344)
T 4gqb_B 79 VQTEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSV---LSSGTQAVSGSKDICIKVWD 155 (344)
T ss_dssp EEESSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEE---CTTSSEEEEEETTSCEEEEE
T ss_pred eccCCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEE---CCCCCEEEEEeCCCeEEEEE
Confidence 3477889999998 4589999999999999984 33322 34589999999999 77899999999999999999
Q ss_pred ecCCCCceeEEEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCC
Q psy2107 187 WKVESNSIECIHVCRGHERGLETVTVSESR-QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSR 265 (391)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (391)
++ ...++..+.+|...|.+++|+|++ .+|++|+.||.|++||+++++
T Consensus 156 ~~----~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~---------------------------- 203 (344)
T 4gqb_B 156 LA----QQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK---------------------------- 203 (344)
T ss_dssp TT----TTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS----------------------------
T ss_pred CC----CCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccc----------------------------
Confidence 65 457788999999999999999987 578999999999999998744
Q ss_pred Cceeee--cCccCcccEEEeccC--CeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCC-CEEEEeeCCCcE
Q psy2107 266 TPLITL--KGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLS-KLVITASADKQI 339 (391)
Q Consensus 266 ~~~~~~--~~~~~~v~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~-~~l~~g~~dg~i 339 (391)
+...+ ..|...+.+++|+|. ..+++|+.||.|++||+++++++.++..|. .|.+++|+|++ ++|++|+.|+.|
T Consensus 204 -~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i 282 (344)
T 4gqb_B 204 -PASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSL 282 (344)
T ss_dssp -CEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred -eeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeE
Confidence 33333 345667899999953 357889999999999999999999998776 89999999997 589999999999
Q ss_pred EEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 340 RLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 340 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+|||+++++ + ..+.+|.+.|++++|+|++..+|+|||.||+|++|++.
T Consensus 283 ~vwd~~~~~---~-~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 283 AVLDSSLSE---L-FRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp EEECTTCCE---E-EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred EEEECCCCc---E-EEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence 999997754 3 35789999999999999888889999999999999973
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.1e-43 Score=304.03 Aligned_cols=260 Identities=17% Similarity=0.249 Sum_probs=228.4
Q ss_pred CccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecC
Q psy2107 91 SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYND 167 (391)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~ 167 (391)
+.++.+++|............+.+|...|.+++++ +.++++++.||+|++||+ ++..+..+..|...+.+++| +
T Consensus 55 s~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~---s 131 (321)
T 3ow8_A 55 SLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAF---S 131 (321)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEE---C
T ss_pred cCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEE---C
Confidence 46889999987543222223467899999999998 569999999999999999 56677788889999999999 7
Q ss_pred CCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCC
Q psy2107 168 GKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGD 247 (391)
Q Consensus 168 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~ 247 (391)
+++.+|++|+.||.|++|+++ .......+..|...|.+++|+|++++|++|+.||.|++||+++
T Consensus 132 pdg~~l~~g~~dg~v~i~~~~----~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~------------ 195 (321)
T 3ow8_A 132 PDSQYLATGTHVGKVNIFGVE----SGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT------------ 195 (321)
T ss_dssp TTSSEEEEECTTSEEEEEETT----TCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT------------
T ss_pred CCCCEEEEEcCCCcEEEEEcC----CCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCC------------
Confidence 789999999999999999965 3345667788999999999999999999999999999999976
Q ss_pred CCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECC
Q psy2107 248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSP 325 (391)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p 325 (391)
.+.+..+.+|..+|.+++|+|++ .|++++.|+.|++||+++++....+..|. .|.+++|+|
T Consensus 196 -----------------~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp 258 (321)
T 3ow8_A 196 -----------------GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP 258 (321)
T ss_dssp -----------------TEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred -----------------CcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECC
Confidence 34567788999999999999765 58999999999999999999998888776 799999999
Q ss_pred CCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 326 LSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 326 ~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
++++|++|+.|+.|++||+++++ ++..+.+|...|.+++|+| ++.+|++++.||.|++||+
T Consensus 259 ~~~~l~s~s~D~~v~iwd~~~~~---~~~~~~~h~~~v~~v~~s~-~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 259 DDTHFVSSSSDKSVKVWDVGTRT---CVHTFFDHQDQVWGVKYNG-NGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECT-TSSEEEEEETTCCEEEEEC
T ss_pred CCCEEEEEeCCCcEEEEeCCCCE---EEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEeC
Confidence 99999999999999999998765 7788899999999999999 6678999999999999996
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.5e-42 Score=298.48 Aligned_cols=242 Identities=22% Similarity=0.359 Sum_probs=212.2
Q ss_pred cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEee
Q psy2107 111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW 187 (391)
Q Consensus 111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~ 187 (391)
.+.+|.+.|++++|+ +++|++|+.||+|++||+ ++..+..+..|..+|.+++| ++++++|++|+.|++|++||+
T Consensus 8 ~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKF---IARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE---EGGGTEEEEEETTSEEEEEET
T ss_pred eecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEE---eCCCCEEEEECCCCEEEEEEC
Confidence 355799999999998 669999999999999999 55667788899999999999 557889999999999999996
Q ss_pred cCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCc
Q psy2107 188 KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTP 267 (391)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (391)
. ..+.+..+.+|...|.+++|+|++++|++|+.||.|++||++++. ..
T Consensus 85 ~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~----------------------------~~ 132 (304)
T 2ynn_A 85 N----TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW----------------------------AL 132 (304)
T ss_dssp T----TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT----------------------------EE
T ss_pred C----CCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc----------------------------ch
Confidence 5 346778889999999999999999999999999999999997532 24
Q ss_pred eeeecCccCcccEEEecc-C-CeEEEEECCCeEEEEecccCceeEEEECC--eeeEEEEECC--CCCEEEEeeCCCcEEE
Q psy2107 268 LITLKGHKEAISAVQWTA-V-DEIITSSWDHTLKIWDAELGGMKSEIVGN--KSFFDVHYSP--LSKLVITASADKQIRL 341 (391)
Q Consensus 268 ~~~~~~~~~~v~~~~~~~-~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~i~~~~~~p--~~~~l~~g~~dg~i~i 341 (391)
...+.+|...|.+++|+| + ..|++|+.|++|++||++++.....+..+ ..+..++|+| ++.+|++|+.|+.|++
T Consensus 133 ~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~i 212 (304)
T 2ynn_A 133 EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKI 212 (304)
T ss_dssp EEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEE
T ss_pred hhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEE
Confidence 567789999999999996 3 46999999999999999988877666543 4788888876 6789999999999999
Q ss_pred EcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 342 YDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 342 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
||+++++ ++..+.+|...|.+++|+| ++.+|+||+.||+|++||++
T Consensus 213 Wd~~~~~---~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 213 WDYQTKS---CVATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNSS 258 (304)
T ss_dssp EETTTTE---EEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETT
T ss_pred EeCCCCc---cceeeCCCCCCEEEEEECC-CCCEEEEEcCCCeEEEEECC
Confidence 9998765 7788999999999999999 66789999999999999974
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.7e-42 Score=300.93 Aligned_cols=271 Identities=17% Similarity=0.308 Sum_probs=231.1
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR 143 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~ 143 (391)
....|.++++++.+ .+.++.+.+|....... ...+..|...|.+++|+ ++++++|+.|+.|++|++
T Consensus 59 ~~~~~s~d~~~l~s----------~s~Dg~v~iWd~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~ 126 (340)
T 1got_B 59 YAMHWGTDSRLLLS----------ASQDGKLIIWDSYTTNK--VHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL 126 (340)
T ss_dssp EEEEECTTSSEEEE----------EETTTEEEEEETTTCCE--EEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred EEEEECCCCCEEEE----------EeCCCcEEEEECCCCCc--ceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 44678888887765 34688999997543222 33445699999999998 679999999999999998
Q ss_pred CC-----ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCE
Q psy2107 144 RG-----EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQ 218 (391)
Q Consensus 144 ~~-----~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 218 (391)
.. .....+.+|.+.|.++.|.+ ++ .+++++.|++|++||++ ....+..+.+|...|.+++|+|++++
T Consensus 127 ~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~-~l~s~s~d~~i~~wd~~----~~~~~~~~~~h~~~v~~~~~~~~~~~ 198 (340)
T 1got_B 127 KTREGNVRVSRELAGHTGYLSCCRFLD---DN-QIVTSSGDTTCALWDIE----TGQQTTTFTGHTGDVMSLSLAPDTRL 198 (340)
T ss_dssp TTCSBSCEEEEEEECCSSCEEEEEEEE---TT-EEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred ccCCCcceeEEEecCCCccEEEEEECC---CC-cEEEEECCCcEEEEECC----CCcEEEEEcCCCCceEEEEECCCCCE
Confidence 43 24456789999999999965 33 48999999999999964 34677888999999999999999999
Q ss_pred EEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCe
Q psy2107 219 FATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHT 297 (391)
Q Consensus 219 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~ 297 (391)
|++|+.||.|++||+++ ..+...+.+|...|.+++|+|++ .|++++.|++
T Consensus 199 l~sg~~d~~v~~wd~~~-----------------------------~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~ 249 (340)
T 1got_B 199 FVSGACDASAKLWDVRE-----------------------------GMCRQTFTGHESDINAICFFPNGNAFATGSDDAT 249 (340)
T ss_dssp EEEEETTSCEEEEETTT-----------------------------CSEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEeCCCcEEEEECCC-----------------------------CeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCc
Confidence 99999999999999976 34567788999999999999654 5999999999
Q ss_pred EEEEecccCceeEEEECCe---eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCC
Q psy2107 298 LKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQ 374 (391)
Q Consensus 298 i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 374 (391)
|++||+++++.+..+..+. .+.+++|+|++++|++|+.|+.|++||+.... ....+.+|...|++++|+| ++.
T Consensus 250 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~---~~~~~~~h~~~v~~~~~s~-dg~ 325 (340)
T 1got_B 250 CRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD---RAGVLAGHDNRVSCLGVTD-DGM 325 (340)
T ss_dssp EEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---EEEEEECCSSCEEEEEECT-TSS
T ss_pred EEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCc---EeeEeecCCCcEEEEEEcC-CCC
Confidence 9999999998887776543 79999999999999999999999999998766 6778899999999999999 667
Q ss_pred EEEEeeCCCcEEEEe
Q psy2107 375 LFVSASFDNSVKLWD 389 (391)
Q Consensus 375 ~l~s~~~dg~v~iwd 389 (391)
+|+||+.||+|+|||
T Consensus 326 ~l~s~s~D~~i~iWd 340 (340)
T 1got_B 326 AVATGSWDSFLKIWN 340 (340)
T ss_dssp CEEEEETTSCEEEEC
T ss_pred EEEEEcCCccEEecC
Confidence 899999999999997
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.4e-42 Score=307.92 Aligned_cols=243 Identities=21% Similarity=0.461 Sum_probs=218.5
Q ss_pred CCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107 109 PLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW 185 (391)
Q Consensus 109 ~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw 185 (391)
...+.+|.++|++++|+ +.++++|+.||+|+|||+ ++.....+.+|...|.+++| ++++.+|++|+.||+|++|
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~---~~~~~~l~sgs~D~~i~iw 177 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF---DHSGKLLASCSADMTIKLW 177 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEE---CTTSSEEEEEETTSCCCEE
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEE---cCCCCEEEEEeCCCeEEEE
Confidence 45667899999999998 569999999999999999 56777889999999999999 7788999999999999999
Q ss_pred eecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCC
Q psy2107 186 EWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSR 265 (391)
Q Consensus 186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (391)
|+. ...++..+.+|...|.+++|+|++++|++|+.|+.|++||+++ .
T Consensus 178 d~~----~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~-----------------------------~ 224 (410)
T 1vyh_C 178 DFQ----GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT-----------------------------G 224 (410)
T ss_dssp ETT----SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT-----------------------------C
T ss_pred eCC----CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC-----------------------------C
Confidence 964 4467788899999999999999999999999999999999976 3
Q ss_pred CceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCC-----------------
Q psy2107 266 TPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPL----------------- 326 (391)
Q Consensus 266 ~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~----------------- 326 (391)
.++..+.+|...|.++.+++++ .+++|+.|++|++||+.++.....+..+. .+.+++|+|+
T Consensus 225 ~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (410)
T 1vyh_C 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKS 304 (410)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC----
T ss_pred cEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhcccccccc
Confidence 4677888999999999999655 58999999999999999999988887665 8999999996
Q ss_pred ---CCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 327 ---SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 327 ---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+.+|++|+.|+.|++||++++. ++..+.+|...|++++|+| ++.+|++|+.||.|++||++
T Consensus 305 ~~~g~~l~sgs~D~~i~iwd~~~~~---~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~D~~i~vwd~~ 368 (410)
T 1vyh_C 305 GKPGPFLLSGSRDKTIKMWDVSTGM---CLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDYK 368 (410)
T ss_dssp ---CCEEEEEETTSEEEEEETTTTE---EEEEEECCSSCEEEEEECS-SSSCEEEEETTTEEEEECCT
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCc---eEEEEECCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECC
Confidence 6789999999999999998765 7778889999999999999 66789999999999999974
No 7
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=9.7e-42 Score=299.88 Aligned_cols=284 Identities=17% Similarity=0.218 Sum_probs=221.5
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCC--CCcccCCCCcEEEEEec-CCEEEEEECCCeEEEEc
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPS--PLDCILHDDWVSAIDFH-NDWILTGCYDHSVHIWT 142 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~h~~~V~~~~~~-~~~l~t~~~dg~i~iwd 142 (391)
....|++||++|++.-.+..+. =++.+.+|......+.. .....+|...|++++|+ ...+++++.||+|+|||
T Consensus 46 ~~v~fSpDG~~las~s~d~~~~----wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd 121 (357)
T 4g56_B 46 GAVRYRRDGALLLAASSLSSRT----WGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWE 121 (357)
T ss_dssp EEEEECSSSCEEEEEECSSSSS----CCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC-
T ss_pred EEEEECCCCCEEEEEcCCCCcc----ccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEee
Confidence 4468999999887632211111 14556666544332221 23345699999999998 45788899999999999
Q ss_pred CCC-ceE----EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCC
Q psy2107 143 RRG-EHK----LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQ 217 (391)
Q Consensus 143 ~~~-~~~----~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 217 (391)
+.. +.. ....+|...|++++| ++++.+|++|+.||.|++||++ ....+..+.+|...|.+++|+|++.
T Consensus 122 ~~~~~~~~~~~~~~~~h~~~V~~v~~---spdg~~l~sgs~dg~v~iwd~~----~~~~~~~~~~h~~~v~~v~~s~~~~ 194 (357)
T 4g56_B 122 ILEKESLLVNKFAKYEHDDIVKTLSV---FSDGTQAVSGGKDFSVKVWDLS----QKAVLKSYNAHSSEVNCVAACPGKD 194 (357)
T ss_dssp -------CCCCEEECCCSSCEEEEEE---CSSSSEEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECTTCS
T ss_pred ccccceeEEEeeccCCCCCCEEEEEE---CCCCCEEEEEeCCCeEEEEECC----CCcEEEEEcCCCCCEEEEEEccCCC
Confidence 843 222 234579999999999 7789999999999999999954 4567888999999999999999874
Q ss_pred -EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC--CeEEEEEC
Q psy2107 218 -QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV--DEIITSSW 294 (391)
Q Consensus 218 -~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~ 294 (391)
++++++.||.|++||+++++.. .......|...+.+++|+|+ ..|++|+.
T Consensus 195 ~~~~s~~~dg~v~~wd~~~~~~~---------------------------~~~~~~~~~~~v~~v~~sp~~~~~la~g~~ 247 (357)
T 4g56_B 195 TIFLSCGEDGRILLWDTRKPKPA---------------------------TRIDFCASDTIPTSVTWHPEKDDTFACGDE 247 (357)
T ss_dssp SCEEEEETTSCEEECCTTSSSCB---------------------------CBCCCTTCCSCEEEEEECTTSTTEEEEEES
T ss_pred ceeeeeccCCceEEEECCCCcee---------------------------eeeeeccccccccchhhhhcccceEEEeec
Confidence 7899999999999999875432 12233456778999999964 35888999
Q ss_pred CCeEEEEecccCceeEEEECCe-eeEEEEECCCC-CEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCC
Q psy2107 295 DHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLS-KLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPID 372 (391)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 372 (391)
|+.|++||+++++.+..+..+. .|.+++|+|++ ++|++|+.|+.|+|||+++++ +.. ..+|.+.|++++|+|.+
T Consensus 248 d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~---~~~-~~~H~~~V~~vafsP~d 323 (357)
T 4g56_B 248 TGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE---VFR-DLSHRDFVTGVAWSPLD 323 (357)
T ss_dssp SSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE---EEE-ECCCSSCEEEEEECSSS
T ss_pred ccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc---EeE-ECCCCCCEEEEEEeCCC
Confidence 9999999999999999988765 89999999987 589999999999999998754 444 44799999999999977
Q ss_pred CCEEEEeeCCCcEEEEecC
Q psy2107 373 PQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 373 ~~~l~s~~~dg~v~iwdlr 391 (391)
+.+|+|||.||+|++||+.
T Consensus 324 ~~~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 324 HSKFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp TTEEEEEETTSCEEEEECC
T ss_pred CCEEEEEcCCCeEEEEECC
Confidence 7899999999999999974
No 8
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2e-41 Score=296.78 Aligned_cols=285 Identities=22% Similarity=0.429 Sum_probs=230.0
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCC-CCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEc
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTP-SPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWT 142 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd 142 (391)
...+|.++|+++++ .+.++.+++|........ ......+|.+.|++++|+ +++|++|+.|+++++|+
T Consensus 20 ~~l~~sp~g~~las----------~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~ 89 (345)
T 3fm0_A 20 WFLAWNPAGTLLAS----------CGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWK 89 (345)
T ss_dssp EEEEECTTSSCEEE----------EETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEEECCCCCEEEE----------EcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEE
Confidence 34689999988876 246788999987643211 112235799999999998 67999999999999999
Q ss_pred CCC---ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEE
Q psy2107 143 RRG---EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQF 219 (391)
Q Consensus 143 ~~~---~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l 219 (391)
... ..+..+.+|...|.+++| ++++.+|++|+.|++|++||++.. ....++..+.+|...|.+++|+|++++|
T Consensus 90 ~~~~~~~~~~~~~~h~~~v~~v~~---sp~~~~l~s~s~D~~v~iwd~~~~-~~~~~~~~~~~h~~~v~~~~~~p~~~~l 165 (345)
T 3fm0_A 90 KNQDDFECVTTLEGHENEVKSVAW---APSGNLLATCSRDKSVWVWEVDEE-DEYECVSVLNSHTQDVKHVVWHPSQELL 165 (345)
T ss_dssp ECCC-EEEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSCEEEEEECTT-SCEEEEEEECCCCSCEEEEEECSSSSCE
T ss_pred ccCCCeEEEEEccCCCCCceEEEE---eCCCCEEEEEECCCeEEEEECCCC-CCeEEEEEecCcCCCeEEEEECCCCCEE
Confidence 844 345678899999999999 778999999999999999997633 2446677888999999999999999999
Q ss_pred EEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeE
Q psy2107 220 ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTL 298 (391)
Q Consensus 220 ~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i 298 (391)
++|+.|+.|++||.+.+. ..+...+.+|...|.+++|+|++ .|++++.|++|
T Consensus 166 ~s~s~d~~i~~w~~~~~~---------------------------~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v 218 (345)
T 3fm0_A 166 ASASYDDTVKLYREEEDD---------------------------WVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTV 218 (345)
T ss_dssp EEEETTSCEEEEEEETTE---------------------------EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEeCCCcEEEEEecCCC---------------------------EEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeE
Confidence 999999999999986522 12456788999999999999655 59999999999
Q ss_pred EEEecccC---------------ceeEEEEC--CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcc------eEEEE
Q psy2107 299 KIWDAELG---------------GMKSEIVG--NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGA------IVKST 355 (391)
Q Consensus 299 ~iwd~~~~---------------~~~~~~~~--~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~------~~~~~ 355 (391)
++||.... .++..+.. ...|.+++|+|++..|++++.|+.|++|+....... .....
T Consensus 219 ~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~ 298 (345)
T 3fm0_A 219 RIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHL 298 (345)
T ss_dssp EEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEE
T ss_pred EEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeee
Confidence 99997432 22333432 347999999999999999999999999997653211 12234
Q ss_pred eccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 356 FSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 356 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
..+|...|++++|+|+++.+|+||+.||+|++|+++
T Consensus 299 ~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~ 334 (345)
T 3fm0_A 299 HQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQ 334 (345)
T ss_dssp TTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEEC
T ss_pred cccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEec
Confidence 568999999999999666799999999999999974
No 9
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4e-41 Score=291.54 Aligned_cols=240 Identities=26% Similarity=0.402 Sum_probs=212.7
Q ss_pred ccCCCCcEEEEEec------CCEEEEEECCCeEEEEcCCCce---EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcE
Q psy2107 112 CILHDDWVSAIDFH------NDWILTGCYDHSVHIWTRRGEH---KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTA 182 (391)
Q Consensus 112 ~~~h~~~V~~~~~~------~~~l~t~~~dg~i~iwd~~~~~---~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v 182 (391)
..+|.+.|++++|+ +++|++|+.||+|+||++.... ...+.+|...|.+++| ++++.++++++.|++|
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~---~~~~~~l~s~s~D~~i 104 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDI---SHTLPIAASSSLDAHI 104 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE---CSSSSEEEEEETTSEE
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEE---CCCCCEEEEEeCCCcE
Confidence 34799999999996 3589999999999999984432 3467899999999999 7788899999999999
Q ss_pred EEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107 183 MIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA 262 (391)
Q Consensus 183 ~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (391)
++||+. ....+..+..|...+.+++|+|++++|++|+.||.|++|+++++
T Consensus 105 ~lWd~~----~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~-------------------------- 154 (321)
T 3ow8_A 105 RLWDLE----NGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG-------------------------- 154 (321)
T ss_dssp EEEETT----TTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTC--------------------------
T ss_pred EEEECC----CCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC--------------------------
Confidence 999965 34667788889999999999999999999999999999999763
Q ss_pred CCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEE
Q psy2107 263 SSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIR 340 (391)
Q Consensus 263 ~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~ 340 (391)
.....+..|...|.+++|+|++ .|++++.|+.|++||+++++.+..+..+. +|.+++|+|++++|++|+.|+.|+
T Consensus 155 ---~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~ 231 (321)
T 3ow8_A 155 ---KKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIK 231 (321)
T ss_dssp ---SEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEE
T ss_pred ---ceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEE
Confidence 3556677888999999999665 58999999999999999999999988765 899999999999999999999999
Q ss_pred EEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 341 LYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 341 iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+||++... ....+.+|...|.+++|+| ++.+|++++.||+|++||++
T Consensus 232 iwd~~~~~---~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~D~~v~iwd~~ 278 (321)
T 3ow8_A 232 IYDVQHAN---LAGTLSGHASWVLNVAFCP-DDTHFVSSSSDKSVKVWDVG 278 (321)
T ss_dssp EEETTTCC---EEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETT
T ss_pred EEECCCcc---eeEEEcCCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCC
Confidence 99998766 7778899999999999999 66789999999999999974
No 10
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-41 Score=293.09 Aligned_cols=270 Identities=20% Similarity=0.360 Sum_probs=209.2
Q ss_pred CccceEEEEEEeccCCCCCCcc-cC-CCCcEEEEEec--CCEEEEEECCCeEEEEcCC--------CceEEeccCCCCCe
Q psy2107 91 SSENVIDVEYLESTPTPSPLDC-IL-HDDWVSAIDFH--NDWILTGCYDHSVHIWTRR--------GEHKLNIPGHGGPV 158 (391)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~-~~-h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~--------~~~~~~~~~~~~~v 158 (391)
+.++.+++|............+ .+ |.+.|++++|+ +++|++|+.|++|+|||+. ......+.+|...|
T Consensus 31 ~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V 110 (330)
T 2hes_X 31 STDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEV 110 (330)
T ss_dssp ESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CE
T ss_pred cCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcE
Confidence 4678899997653221111112 23 99999999998 6799999999999999983 23455778999999
Q ss_pred eEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCC
Q psy2107 159 KGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKE 238 (391)
Q Consensus 159 ~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~ 238 (391)
.+++| ++++.+|++|+.|++|++||++.......++..+.+|...|.+++|+|++++|++|+.|+.|++||..++.
T Consensus 111 ~~v~~---sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~- 186 (330)
T 2hes_X 111 KGVAW---SNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDD- 186 (330)
T ss_dssp EEEEE---CTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTE-
T ss_pred EEEEE---CCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCC-
Confidence 99999 77899999999999999999753334456788899999999999999999999999999999999986421
Q ss_pred CCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC--C-eEEEEECCCeEEEEecccC--------c
Q psy2107 239 RGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV--D-EIITSSWDHTLKIWDAELG--------G 307 (391)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~-~l~s~~~dg~i~iwd~~~~--------~ 307 (391)
..++..+.+|...|.+++|+|+ + .+++++.|++|++||+..+ .
T Consensus 187 --------------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 240 (330)
T 2hes_X 187 --------------------------WECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWV 240 (330)
T ss_dssp --------------------------EEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEE
T ss_pred --------------------------eeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeE
Confidence 2356788899999999999975 3 5899999999999999765 2
Q ss_pred eeEEEE--CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccC-cEEEEEECCC-CCCEEEEeeCCC
Q psy2107 308 MKSEIV--GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKE-WVQSVRWSPI-DPQLFVSASFDN 383 (391)
Q Consensus 308 ~~~~~~--~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~-~v~~~~~~~~-~~~~l~s~~~dg 383 (391)
....+. +...|.+++|++++ +|++|+.||.|++||...+..........+|.. .|++++|+|. ++.+|+||+.||
T Consensus 241 ~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg 319 (330)
T 2hes_X 241 CEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDG 319 (330)
T ss_dssp EEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTS
T ss_pred EeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCC
Confidence 333333 33489999999755 899999999999999865432223334567887 8999999994 466899999999
Q ss_pred cEEEEecC
Q psy2107 384 SVKLWDLR 391 (391)
Q Consensus 384 ~v~iwdlr 391 (391)
+|+|||++
T Consensus 320 ~v~~W~~~ 327 (330)
T 2hes_X 320 IVNFWSLE 327 (330)
T ss_dssp EEEEEEC-
T ss_pred cEEEEEec
Confidence 99999974
No 11
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.1e-40 Score=285.13 Aligned_cols=275 Identities=20% Similarity=0.316 Sum_probs=228.5
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR 143 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~ 143 (391)
...+|.++++.+.+ .+.++.+++|...... ....+..|..+|.+++|+ +++|++|+.|++|++||+
T Consensus 17 ~~~~fsp~~~~l~s----------~~~dg~v~lWd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 17 KGIDFHPTEPWVLT----------TLYSGRVELWNYETQV--EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp EEEEECSSSSEEEE----------EETTSEEEEEETTTTE--EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred EEEEECCCCCEEEE----------EcCCCcEEEEECCCCc--eeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 45789999987765 2357889999764322 123455799999999997 779999999999999999
Q ss_pred -CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC-CCCEEEE
Q psy2107 144 -RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE-SRQQFAT 221 (391)
Q Consensus 144 -~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~s 221 (391)
+++.+..+.+|...|.+++| ++++.+|++|+.||+|++||++. .......+.+|...|.+++|+| ++.+|++
T Consensus 85 ~~~~~~~~~~~h~~~v~~~~~---~~~~~~l~sgs~D~~v~lWd~~~---~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s 158 (304)
T 2ynn_A 85 NTGEKVVDFEAHPDYIRSIAV---HPTKPYVLSGSDDLTVKLWNWEN---NWALEQTFEGHEHFVMCVAFNPKDPSTFAS 158 (304)
T ss_dssp TTCCEEEEEECCSSCEEEEEE---CSSSSEEEEEETTSCEEEEEGGG---TTEEEEEECCCCSCEEEEEECTTCTTEEEE
T ss_pred CCCcEEEEEeCCCCcEEEEEE---cCCCCEEEEECCCCeEEEEECCC---CcchhhhhcccCCcEEEEEECCCCCCEEEE
Confidence 67778889999999999999 77888999999999999999752 2245677889999999999999 6789999
Q ss_pred EeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc--C-CeEEEEECCCeE
Q psy2107 222 GGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA--V-DEIITSSWDHTL 298 (391)
Q Consensus 222 g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~-~~l~s~~~dg~i 298 (391)
|+.|+.|++||+++... ......+|...+..+.|.+ + ..+++++.|++|
T Consensus 159 gs~D~~v~iwd~~~~~~----------------------------~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i 210 (304)
T 2ynn_A 159 GCLDRTVKVWSLGQSTP----------------------------NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTI 210 (304)
T ss_dssp EETTSEEEEEETTCSSC----------------------------SEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEE
T ss_pred EeCCCeEEEEECCCCCc----------------------------cceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeE
Confidence 99999999999975332 2223345667889999984 3 469999999999
Q ss_pred EEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCC-EE
Q psy2107 299 KIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQ-LF 376 (391)
Q Consensus 299 ~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l 376 (391)
++||+++++++.++..|. .+.+++|+|++++|++|+.||.|++||+++.+ +...+..|...+.+++|+|+++. ++
T Consensus 211 ~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (304)
T 2ynn_A 211 KIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK---VEKTLNVGLERSWCIATHPTGRKNYI 287 (304)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC---EEEEECCSSSSEEEEEECTTCGGGCE
T ss_pred EEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCc---eeeeccCCCccEEEEEECCCCCceEE
Confidence 999999999999998775 89999999999999999999999999998876 77888899999999999996654 47
Q ss_pred EEeeCCCcEEEEec
Q psy2107 377 VSASFDNSVKLWDL 390 (391)
Q Consensus 377 ~s~~~dg~v~iwdl 390 (391)
++|+.| .+.+|++
T Consensus 288 asg~~~-g~~~~~~ 300 (304)
T 2ynn_A 288 ASGFDN-GFTVLSL 300 (304)
T ss_dssp EEEETT-EEEEEEC
T ss_pred EEecCC-ceEEEEe
Confidence 777655 5667765
No 12
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.8e-40 Score=284.64 Aligned_cols=250 Identities=20% Similarity=0.324 Sum_probs=206.2
Q ss_pred cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCC---ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107 111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRG---EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW 185 (391)
Q Consensus 111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~---~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw 185 (391)
.+.+|.+.|++++|+ +++|++|+.||+|+|||+.+ ..+..+.+|.++|.+++|.|. .++.+|++|+.||+|++|
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~-~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP-KFGTILASCSYDGKVMIW 82 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCG-GGCSEEEEEETTTEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCC-CcCCEEEEEcCCCEEEEE
Confidence 345799999999998 77999999999999999843 456788999999999999431 137899999999999999
Q ss_pred eecCCCCceeEEEEEecCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107 186 EWKVESNSIECIHVCRGHERGLETVTVSES--RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS 263 (391)
Q Consensus 186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (391)
|++ ......+..+.+|...|.+++|+|+ +.+|++|+.||.|++||+++...
T Consensus 83 d~~--~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~------------------------- 135 (297)
T 2pm7_B 83 KEE--NGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT------------------------- 135 (297)
T ss_dssp EBS--SSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC-------------------------
T ss_pred EcC--CCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc-------------------------
Confidence 965 3333455667889999999999997 88999999999999999976321
Q ss_pred CCCceeeecCccCcccEEEeccC--------------CeEEEEECCCeEEEEecccCc----eeEEEECCe-eeEEEEEC
Q psy2107 264 SRTPLITLKGHKEAISAVQWTAV--------------DEIITSSWDHTLKIWDAELGG----MKSEIVGNK-SFFDVHYS 324 (391)
Q Consensus 264 ~~~~~~~~~~~~~~v~~~~~~~~--------------~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~-~i~~~~~~ 324 (391)
.....+.+|...|.+++|+|. ..|++|+.|++|++||++++. ....+..|. .|.+++|+
T Consensus 136 --~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~s 213 (297)
T 2pm7_B 136 --TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS 213 (297)
T ss_dssp --BCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC
T ss_pred --eeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEEC
Confidence 123456789999999999975 479999999999999998876 455666655 89999999
Q ss_pred CCC---CEEEEeeCCCcEEEEcCCCCCcceEEEEe--ccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 325 PLS---KLVITASADKQIRLYDPKVKEGAIVKSTF--SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 325 p~~---~~l~~g~~dg~i~iwd~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
|++ .+|++|+.|+.|++||++..........+ ..|...|.+++|+| ++.+|++++.||.|+||+.+
T Consensus 214 p~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 214 PTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECS-SSCCEEEEETTSCEEEEEEC
T ss_pred CCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECC-CCCEEEEEcCCCcEEEEEEC
Confidence 985 89999999999999998764322222333 56889999999999 56689999999999999863
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.2e-40 Score=292.80 Aligned_cols=272 Identities=18% Similarity=0.295 Sum_probs=230.4
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR 143 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~ 143 (391)
...+|.++++.+++ .+.++.+.+|....... ......|...|.+++|+ +..+++|+.|+.+++|++
T Consensus 68 ~~~~~s~d~~~l~s----------~s~Dg~v~vWd~~~~~~--~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 68 LCMDWCKDKRRIVS----------SSQDGKVIVWDSFTTNK--EHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 135 (354)
T ss_dssp EEEEECTTSSEEEE----------EETTSEEEEEETTTCCE--EEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEEC
T ss_pred EEEEECCCCCEEEE----------EeCCCeEEEEECCCCCc--ceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEE
Confidence 45688888877765 34688999997533221 23445688899999998 679999999999999987
Q ss_pred CC-------ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC--
Q psy2107 144 RG-------EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE-- 214 (391)
Q Consensus 144 ~~-------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-- 214 (391)
.. .....+..|...|.+++| ++++..|++++.||+|++||++ ...++..+.+|...|.+++|+|
T Consensus 136 ~~~~~~~~~~~~~~~~~h~~~v~~~~~---~~~~~~l~t~s~D~~v~lwd~~----~~~~~~~~~~h~~~v~~~~~~~~~ 208 (354)
T 2pbi_B 136 TFDKNENMAAKKKSVAMHTNYLSACSF---TNSDMQILTASGDGTCALWDVE----SGQLLQSFHGHGADVLCLDLAPSE 208 (354)
T ss_dssp CCCTTCCSGGGCEEEEECSSCEEEEEE---CSSSSEEEEEETTSEEEEEETT----TCCEEEEEECCSSCEEEEEECCCS
T ss_pred eccccccccccceeeeccCCcEEEEEE---eCCCCEEEEEeCCCcEEEEeCC----CCeEEEEEcCCCCCeEEEEEEeCC
Confidence 32 234566789999999999 7778899999999999999965 3467788999999999999988
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEE
Q psy2107 215 SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSS 293 (391)
Q Consensus 215 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~ 293 (391)
++++|++|+.||.|++||+++ ..++..+.+|...|.+++|+|+ ..|++++
T Consensus 209 ~g~~l~sgs~Dg~v~~wd~~~-----------------------------~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s 259 (354)
T 2pbi_B 209 TGNTFVSGGCDKKAMVWDMRS-----------------------------GQCVQAFETHESDVNSVRYYPSGDAFASGS 259 (354)
T ss_dssp SCCEEEEEETTSCEEEEETTT-----------------------------CCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCC-----------------------------CcEEEEecCCCCCeEEEEEeCCCCEEEEEe
Confidence 468999999999999999976 3467778899999999999965 4699999
Q ss_pred CCCeEEEEecccCceeEEEECCe---eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECC
Q psy2107 294 WDHTLKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP 370 (391)
Q Consensus 294 ~dg~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 370 (391)
.|++|++||++.++.+..+..+. .+.+++|+|++++|++|+.|+.|++||+..+. .+..+.+|...|++++|+|
T Consensus 260 ~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~---~~~~l~~h~~~v~~l~~sp 336 (354)
T 2pbi_B 260 DDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS---RVSILFGHENRVSTLRVSP 336 (354)
T ss_dssp TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS---EEEEECCCSSCEEEEEECT
T ss_pred CCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc---eEEEEECCCCcEEEEEECC
Confidence 99999999999988777766443 68899999999999999999999999998766 6678889999999999999
Q ss_pred CCCCEEEEeeCCCcEEEEe
Q psy2107 371 IDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 371 ~~~~~l~s~~~dg~v~iwd 389 (391)
++.+|++|+.||+|+||+
T Consensus 337 -dg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 337 -DGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp -TSSCEEEEETTSEEEEEC
T ss_pred -CCCEEEEEcCCCCEEecC
Confidence 667899999999999996
No 14
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.4e-40 Score=287.19 Aligned_cols=245 Identities=18% Similarity=0.275 Sum_probs=214.0
Q ss_pred CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107 110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE 186 (391)
Q Consensus 110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd 186 (391)
..+.+|.+.|++++|+ +++|++|+.||+|++||. ++..+..+..|...|.+++| ++++.++++|+.|+.+++|+
T Consensus 49 ~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~---s~~~~~l~s~~~d~~v~iw~ 125 (340)
T 1got_B 49 RTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY---APSGNYVACGGLDNICSIYN 125 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEE---CTTSSEEEEEETTCEEEEEE
T ss_pred eeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEE---CCCCCEEEEEeCCCeEEEEE
Confidence 3456899999999998 669999999999999998 66777888899999999999 77899999999999999999
Q ss_pred ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107 187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT 266 (391)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (391)
+............+.+|...|.++.|++++. +++++.|+.|++||+++ ..
T Consensus 126 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~-----------------------------~~ 175 (340)
T 1got_B 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIET-----------------------------GQ 175 (340)
T ss_dssp TTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTT-----------------------------TE
T ss_pred CccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCC-----------------------------Cc
Confidence 7655445567788899999999999998875 89999999999999976 33
Q ss_pred ceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcC
Q psy2107 267 PLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDP 344 (391)
Q Consensus 267 ~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~ 344 (391)
.+..+.+|...|.+++|+|++ .+++|+.|+.|++||++++.....+..|. .|.+++|+|++++|++|+.||.|++||+
T Consensus 176 ~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~ 255 (340)
T 1got_B 176 QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL 255 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEEC
Confidence 567788999999999999765 58999999999999999999999988765 8999999999999999999999999999
Q ss_pred CCCCcceEEEEec--cccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 345 KVKEGAIVKSTFS--SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 345 ~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+... ....+. .+...|++++|+| ++.+|++|+.||.|++||++
T Consensus 256 ~~~~---~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~d~~i~vwd~~ 300 (340)
T 1got_B 256 RADQ---ELMTYSHDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDAL 300 (340)
T ss_dssp TTTE---EEEEECCTTCCSCEEEEEECT-TSSEEEEEETTSEEEEEETT
T ss_pred CCCc---EEEEEccCCcccceEEEEECC-CCCEEEEECCCCeEEEEEcc
Confidence 8754 333333 3345799999999 67799999999999999974
No 15
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.2e-40 Score=283.72 Aligned_cols=273 Identities=19% Similarity=0.326 Sum_probs=227.2
Q ss_pred ceeeEEeCC-eEehhhHHHHHHHcCCCccceEEEEEEeccCCC---CCCcccCCCCcEEEEEec--CCEEEEEECCCeEE
Q psy2107 66 IQFDFLIAG-ELLRTSVTSFLESKGISSENVIDVEYLESTPTP---SPLDCILHDDWVSAIDFH--NDWILTGCYDHSVH 139 (391)
Q Consensus 66 ~~~~f~~~~-~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~ 139 (391)
....|.+++ +++.+ .+.++.+.+|........ ....+.+|...|.+++|+ +++|++|+.||+|+
T Consensus 21 ~~l~~~~~~~~~l~s----------~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~ 90 (319)
T 3frx_A 21 TSLATSAGQPNLLLS----------ASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLR 90 (319)
T ss_dssp EEEEECSSCTTEEEE----------EETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEEEccCCCccEEEE----------ecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEE
Confidence 345677654 55554 346889999987643321 123456899999999998 67999999999999
Q ss_pred EEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC---
Q psy2107 140 IWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES--- 215 (391)
Q Consensus 140 iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--- 215 (391)
+||+ +++....+.+|...|.+++| ++++.+|++|+.|++|++||++ ..++..+.+|...|.+++|+|.
T Consensus 91 ~wd~~~~~~~~~~~~h~~~v~~~~~---~~~~~~l~s~s~D~~i~vwd~~-----~~~~~~~~~h~~~v~~~~~~~~~~~ 162 (319)
T 3frx_A 91 LWDVATGETYQRFVGHKSDVMSVDI---DKKASMIISGSRDKTIKVWTIK-----GQCLATLLGHNDWVSQVRVVPNEKA 162 (319)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEE---CTTSCEEEEEETTSCEEEEETT-----SCEEEEECCCSSCEEEEEECCC---
T ss_pred EEECCCCCeeEEEccCCCcEEEEEE---cCCCCEEEEEeCCCeEEEEECC-----CCeEEEEeccCCcEEEEEEccCCCC
Confidence 9999 56677788999999999999 7789999999999999999953 2467788899999999999985
Q ss_pred ---CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEE
Q psy2107 216 ---RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIIT 291 (391)
Q Consensus 216 ---~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s 291 (391)
+..|++++.|+.|++||+++ ......+.+|...|.+++|+|++ .|++
T Consensus 163 ~~~~~~l~s~~~d~~i~~wd~~~-----------------------------~~~~~~~~~h~~~v~~~~~sp~g~~l~s 213 (319)
T 3frx_A 163 DDDSVTIISAGNDKMVKAWNLNQ-----------------------------FQIEADFIGHNSNINTLTASPDGTLIAS 213 (319)
T ss_dssp ---CCEEEEEETTSCEEEEETTT-----------------------------TEEEEEECCCCSCEEEEEECTTSSEEEE
T ss_pred CCCccEEEEEeCCCEEEEEECCc-----------------------------chhheeecCCCCcEEEEEEcCCCCEEEE
Confidence 44899999999999999976 33566788999999999999765 5899
Q ss_pred EECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEe--------ccccCcE
Q psy2107 292 SSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTF--------SSHKEWV 363 (391)
Q Consensus 292 ~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~--------~~h~~~v 363 (391)
++.||.|++||+.+++.+..+..+..+.+++|+|++.+|++++. +.+++|++.... ....+ ..|...+
T Consensus 214 ~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~-~~i~v~~~~~~~---~~~~~~~~~~~~~~~~~~~v 289 (319)
T 3frx_A 214 AGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATA-TGIKVFSLDPQY---LVDDLRPEFAGYSKAAEPHA 289 (319)
T ss_dssp EETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEET-TEEEEEEETTEE---EEEEECCCCTTCCGGGCCCE
T ss_pred EeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcC-CCcEEEEeCcCe---eeeccCccccccccCcCcce
Confidence 99999999999999999999999899999999999999998875 459999986533 33333 2356789
Q ss_pred EEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 364 QSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 364 ~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
.+++|+| ++++|++|+.||.|+|||+
T Consensus 290 ~~~~~sp-dg~~l~sg~~Dg~i~vWd~ 315 (319)
T 3frx_A 290 VSLAWSA-DGQTLFAGYTDNVIRVWQV 315 (319)
T ss_dssp EEEEECT-TSSEEEEEETTSCEEEEEE
T ss_pred eEEEECC-CCCEEEEeecCceEEEEEE
Confidence 9999999 6678999999999999997
No 16
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=288.96 Aligned_cols=242 Identities=18% Similarity=0.243 Sum_probs=197.4
Q ss_pred cCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCC------------ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC
Q psy2107 113 ILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRG------------EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST 178 (391)
Q Consensus 113 ~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~------------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~ 178 (391)
..|...|.+++|+ |.+|++++ |+++++||... ........+...|.+++|+| + ..|++|+.
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~---d-~~l~~~s~ 101 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVG---E-RGILVASD 101 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEET---T-TEEEEEET
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeC---C-CeEEEEEC
Confidence 3577889999998 66887777 77788886311 11112224567899999954 4 36889999
Q ss_pred CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccc
Q psy2107 179 DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKE 258 (391)
Q Consensus 179 dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (391)
||+|++||++...........+.+|.+.|++++|+|++++|++|+.||.|++||+++
T Consensus 102 dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~----------------------- 158 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ----------------------- 158 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----------------------
T ss_pred CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC-----------------------
Confidence 999999998754444444456678999999999999999999999999999999976
Q ss_pred cccCCCCCceeeecCccCcccEEEeccCC--eEEEEECCCeEEEEecccCceeEEEECC---eeeEEEEECCC-CCEEEE
Q psy2107 259 YSSASSRTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKSEIVGN---KSFFDVHYSPL-SKLVIT 332 (391)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~i~~~~~~p~-~~~l~~ 332 (391)
.+++..+.+|...|.+++|++++ .|++++.|++|++||+++++....+... ..+.+++|+|+ +++|++
T Consensus 159 ------~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~s 232 (344)
T 4gqb_B 159 ------QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVF 232 (344)
T ss_dssp ------TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEE
T ss_pred ------CcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEE
Confidence 44678889999999999999654 5889999999999999999988776433 36889999995 568899
Q ss_pred eeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 333 ASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 333 g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
|+.||.|++||+++++ ++..+.+|...|++++|+|++..+|+||+.||+|+|||++
T Consensus 233 g~~dg~v~~wd~~~~~---~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~ 288 (344)
T 4gqb_B 233 GDENGTVSLVDTKSTS---CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSS 288 (344)
T ss_dssp EETTSEEEEEESCC-----CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred eccCCcEEEEECCCCc---EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECC
Confidence 9999999999998766 6778899999999999999776789999999999999974
No 17
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.8e-40 Score=284.24 Aligned_cols=249 Identities=20% Similarity=0.336 Sum_probs=201.0
Q ss_pred ccCCCCcEEEEEecCCEEEEEECCCeEEEEcCCC---ceEEec-cC-CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107 112 CILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRG---EHKLNI-PG-HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE 186 (391)
Q Consensus 112 ~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~~~---~~~~~~-~~-~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd 186 (391)
+.+|.+.|.+++|++++|++|+.||+|++||+.. .....+ .+ |...|.+++| +|++.+|++|+.|++|++|+
T Consensus 10 ~~~h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~---sp~~~~las~s~D~~v~iw~ 86 (330)
T 2hes_X 10 LKLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAW---RPHTSLLAAGSFDSTVSIWA 86 (330)
T ss_dssp EECCSSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEE---CTTSSEEEEEETTSCEEEEE
T ss_pred eccCCCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEE---CCCCCEEEEEeCCCcEEEEE
Confidence 4579999999999988999999999999999954 233344 34 9999999999 77889999999999999999
Q ss_pred ecCCC---CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107 187 WKVES---NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS 263 (391)
Q Consensus 187 ~~~~~---~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (391)
+.... .....+..+.+|...|.+++|+|++++|++|+.|+.|++||++....
T Consensus 87 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~------------------------- 141 (330)
T 2hes_X 87 KEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGE------------------------- 141 (330)
T ss_dssp C-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCC-------------------------
T ss_pred cccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCC-------------------------
Confidence 64221 23456778899999999999999999999999999999999953211
Q ss_pred CCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccC--ceeEEEECCe-eeEEEEECCC--CCEEEEeeCCC
Q psy2107 264 SRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELG--GMKSEIVGNK-SFFDVHYSPL--SKLVITASADK 337 (391)
Q Consensus 264 ~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~-~i~~~~~~p~--~~~l~~g~~dg 337 (391)
...++..+.+|...|.+++|+|++ .|++++.|++|++||..++ +++..+..|. .|.+++|+|+ +.+|++|+.|+
T Consensus 142 ~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~ 221 (330)
T 2hes_X 142 EYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS 221 (330)
T ss_dssp CCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS
T ss_pred CeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC
Confidence 123566788999999999999654 6999999999999999876 5667777665 8999999998 67899999999
Q ss_pred cEEEEcCCCCCc-----ceEEEEecc-ccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 338 QIRLYDPKVKEG-----AIVKSTFSS-HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 338 ~i~iwd~~~~~~-----~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
.|++||++.... ......+.+ |...|.+++|++ ++ +|++++.||.|+|||+
T Consensus 222 ~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-~~-~l~s~~~dg~v~iw~~ 278 (330)
T 2hes_X 222 TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGF-NG-LIASVGADGVLAVYEE 278 (330)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECT-TS-CEEEEETTSCEEEEEE
T ss_pred eEEEEEecCCCccccceeEEeeecccccccceEEEEEcC-CC-EEEEEeCCCEEEEEEc
Confidence 999999864311 123444554 999999999997 54 6999999999999986
No 18
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.4e-39 Score=288.94 Aligned_cols=246 Identities=18% Similarity=0.333 Sum_probs=199.3
Q ss_pred cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEee
Q psy2107 111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW 187 (391)
Q Consensus 111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~ 187 (391)
.+.+|.+.|++++|+ +++|++|+.||+|+|||. ++.....+..|...|.+++| ++++.+|++|+.|+.+++|++
T Consensus 61 ~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~---s~~g~~las~~~d~~v~iw~~ 137 (380)
T 3iz6_a 61 TLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAF---APNGQSVACGGLDSACSIFNL 137 (380)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEE---CTTSSEEEECCSSSCCEEEEC
T ss_pred cccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEE---CCCCCEEEEeeCCCcEEEEEC
Confidence 356899999999998 669999999999999998 56666777788888888888 555556666666666555554
Q ss_pred cCC----------------------------------------------CCceeEEEEE-----ecCCCCeEEEEEcC-C
Q psy2107 188 KVE----------------------------------------------SNSIECIHVC-----RGHERGLETVTVSE-S 215 (391)
Q Consensus 188 ~~~----------------------------------------------~~~~~~~~~~-----~~~~~~v~~l~~~~-~ 215 (391)
... ......+..+ .+|...|.+++|++ +
T Consensus 138 ~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 217 (380)
T 3iz6_a 138 SSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLN 217 (380)
T ss_dssp CCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSS
T ss_pred CCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCC
Confidence 210 0011233333 46888999999987 8
Q ss_pred CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEEC
Q psy2107 216 RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSW 294 (391)
Q Consensus 216 ~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~ 294 (391)
+++|++|+.||.|++||++.. ...+..+.+|...|.+++|+|++ .|++|+.
T Consensus 218 ~~~l~sgs~D~~v~~wd~~~~----------------------------~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~ 269 (380)
T 3iz6_a 218 ANMFISGSCDTTVRLWDLRIT----------------------------SRAVRTYHGHEGDINSVKFFPDGQRFGTGSD 269 (380)
T ss_dssp CCEEEEEETTSCEEEEETTTT----------------------------CCCCEEECCCSSCCCEEEECTTSSEEEEECS
T ss_pred CCEEEEEECCCeEEEEECCCC----------------------------CcceEEECCcCCCeEEEEEecCCCeEEEEcC
Confidence 899999999999999999742 23567788999999999999765 5999999
Q ss_pred CCeEEEEecccCceeEEEECCe--------eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEe----ccccCc
Q psy2107 295 DHTLKIWDAELGGMKSEIVGNK--------SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTF----SSHKEW 362 (391)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~~~--------~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~----~~h~~~ 362 (391)
|++|++||+++++.+..+..+. .+.+++|+|+|++|++|+.||.|++||+...+ ....+ .+|.+.
T Consensus 270 D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~---~~~~~~~~~~~h~~~ 346 (380)
T 3iz6_a 270 DGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAE---MVLNLGTLQNSHEGR 346 (380)
T ss_dssp SSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCC---EEEEECCSCSSCCCC
T ss_pred CCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCc---eEEEEecccCCCCCc
Confidence 9999999999999888876532 37899999999999999999999999987765 44444 689999
Q ss_pred EEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 363 VQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 363 v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
|++++|+| ++.+|+||+.||+|+||++.
T Consensus 347 v~~l~~s~-dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 347 ISCLGLSS-DGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp CCEEEECS-SSSEEEEECTTSCEEEEECC
T ss_pred eEEEEECC-CCCEEEEeeCCCCEEEEecC
Confidence 99999999 66789999999999999974
No 19
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=282.27 Aligned_cols=247 Identities=21% Similarity=0.400 Sum_probs=205.0
Q ss_pred ccCCCC-cEEEEEec--CCEEEEEECCCeEEEEcCCCce----EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEE
Q psy2107 112 CILHDD-WVSAIDFH--NDWILTGCYDHSVHIWTRRGEH----KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMI 184 (391)
Q Consensus 112 ~~~h~~-~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~----~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~i 184 (391)
+.+|.+ .|.+++|+ +++|++|+.||+|+|||+.+.. .....+|...|.+++| ++++.+|++|+.|+++++
T Consensus 11 ~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~---sp~g~~l~s~s~D~~v~i 87 (345)
T 3fm0_A 11 VPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAW---SPCGNYLASASFDATTCI 87 (345)
T ss_dssp ECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEE---CTTSSEEEEEETTSCEEE
T ss_pred ecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEE---CCCCCEEEEEECCCcEEE
Confidence 346887 99999998 6799999999999999995442 1234689999999999 778999999999999999
Q ss_pred EeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107 185 WEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS 264 (391)
Q Consensus 185 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (391)
|++. .....++..+.+|...|.+++|+|++++|++|+.|+.|++||++.+..
T Consensus 88 w~~~--~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~-------------------------- 139 (345)
T 3fm0_A 88 WKKN--QDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE-------------------------- 139 (345)
T ss_dssp EEEC--CC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSC--------------------------
T ss_pred EEcc--CCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCC--------------------------
Confidence 9965 345567888999999999999999999999999999999999976332
Q ss_pred CCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCce--eEEEECCe-eeEEEEECCCCCEEEEeeCCCcEE
Q psy2107 265 RTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGM--KSEIVGNK-SFFDVHYSPLSKLVITASADKQIR 340 (391)
Q Consensus 265 ~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~ 340 (391)
...+..+.+|...|.+++|+|++ .|++++.|+.|++||++++.. ...+..|. .|.+++|+|++++|++|+.|+.|+
T Consensus 140 ~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~ 219 (345)
T 3fm0_A 140 YECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVR 219 (345)
T ss_dssp EEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEE
Confidence 23456778899999999999655 599999999999999988753 45566554 899999999999999999999999
Q ss_pred EEcCCCCCc------------ceEEEEecc-ccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 341 LYDPKVKEG------------AIVKSTFSS-HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 341 iwd~~~~~~------------~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
+|+...... ..++..+.+ |...|.+++|+| ++..|++++.|+.|++|++
T Consensus 220 iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~vw~~ 281 (345)
T 3fm0_A 220 IWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQ-LTGALATACGDDAIRVFQE 281 (345)
T ss_dssp EEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECT-TTCCEEEEETTSCEEEEEE
T ss_pred EeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEec-CCCEEEEEeCCCeEEEEEe
Confidence 999643211 123344444 889999999999 5557999999999999986
No 20
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=8e-39 Score=281.08 Aligned_cols=246 Identities=18% Similarity=0.262 Sum_probs=211.5
Q ss_pred CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107 110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE 186 (391)
Q Consensus 110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd 186 (391)
..+.+|.+.|++++|+ +.+|++|+.||+|+|||. ++.....+..|...|.+++| +|++.++++|+.|+.+++|+
T Consensus 58 ~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~---sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 58 RTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAY---APSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEE---CTTSSEEEEESTTSEEEEEE
T ss_pred EEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEE---CCCCCEEEEeeCCCCEEEEE
Confidence 3456899999999998 669999999999999998 66677778889999999999 77899999999999999999
Q ss_pred ecCCC--CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107 187 WKVES--NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS 264 (391)
Q Consensus 187 ~~~~~--~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (391)
+.... ........+.+|...|.+++|+|++..|++|+.|+.|++||+++
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~----------------------------- 185 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVES----------------------------- 185 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTT-----------------------------
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCC-----------------------------
Confidence 75331 11233456678999999999999999999999999999999976
Q ss_pred CCceeeecCccCcccEEEecc---CCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEE
Q psy2107 265 RTPLITLKGHKEAISAVQWTA---VDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIR 340 (391)
Q Consensus 265 ~~~~~~~~~~~~~v~~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~ 340 (391)
...+..+.+|...|.+++|++ +..|++|+.||.|++||+++++++..+..|. .|.+++|+|++++|++|+.|+.|+
T Consensus 186 ~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~ 265 (354)
T 2pbi_B 186 GQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCR 265 (354)
T ss_dssp CCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEE
Confidence 346778889999999999985 2579999999999999999999999888665 899999999999999999999999
Q ss_pred EEcCCCCCcceEEEEec--cccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 341 LYDPKVKEGAIVKSTFS--SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 341 iwd~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+||++... ....+. .+...+++++|+| ++.+|++|+.|+.|++||++
T Consensus 266 lwd~~~~~---~~~~~~~~~~~~~~~~~~~s~-~g~~l~~g~~d~~i~vwd~~ 314 (354)
T 2pbi_B 266 LYDLRADR---EVAIYSKESIIFGASSVDFSL-SGRLLFAGYNDYTINVWDVL 314 (354)
T ss_dssp EEETTTTE---EEEEECCTTCCSCEEEEEECT-TSSEEEEEETTSCEEEEETT
T ss_pred EEECCCCc---EEEEEcCCCcccceeEEEEeC-CCCEEEEEECCCcEEEEECC
Confidence 99998754 333333 3345789999999 67799999999999999974
No 21
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.5e-40 Score=285.32 Aligned_cols=250 Identities=20% Similarity=0.312 Sum_probs=198.2
Q ss_pred cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCc---eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107 111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGE---HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW 185 (391)
Q Consensus 111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw 185 (391)
.+.+|.+.|++++|+ +++|++|+.|++|+|||+... .+..+.+|.+.|.+++|.|. .++.+|++|+.|++|++|
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~-~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHP-MYGNILASCSYDRKVIIW 86 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCG-GGSSCEEEEETTSCEEEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCC-CCCCEEEEEECCCEEEEE
Confidence 345799999999998 789999999999999999432 35678899999999999431 147799999999999999
Q ss_pred eecCCCCceeEEEEEecCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107 186 EWKVESNSIECIHVCRGHERGLETVTVSES--RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS 263 (391)
Q Consensus 186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (391)
|++ .........+.+|...|.+++|+|+ +.+|++|+.||.|++||++....
T Consensus 87 d~~--~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~------------------------- 139 (316)
T 3bg1_A 87 REE--NGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ------------------------- 139 (316)
T ss_dssp CCS--SSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC-------------------------
T ss_pred ECC--CCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC-------------------------
Confidence 965 3334566778899999999999997 78999999999999999975321
Q ss_pred CCCceeeecCccCcccEEEeccC------------------CeEEEEECCCeEEEEecccC---ceeEEEECCe-eeEEE
Q psy2107 264 SRTPLITLKGHKEAISAVQWTAV------------------DEIITSSWDHTLKIWDAELG---GMKSEIVGNK-SFFDV 321 (391)
Q Consensus 264 ~~~~~~~~~~~~~~v~~~~~~~~------------------~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~-~i~~~ 321 (391)
......+.+|...|.+++|+|. ..|++|+.|++|++||++.. +....+..|. .|.++
T Consensus 140 -~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v 218 (316)
T 3bg1_A 140 -WEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDV 218 (316)
T ss_dssp -EEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEE
T ss_pred -cceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEE
Confidence 0123345678888999999865 46999999999999999755 3455566554 89999
Q ss_pred EECCCC----CEEEEeeCCCcEEEEcCCCCCc-ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 322 HYSPLS----KLVITASADKQIRLYDPKVKEG-AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 322 ~~~p~~----~~l~~g~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
+|+|++ ++|++|+.|++|++|++..... ......+..|...|.+++|+| ++.+|++++.||+|++|++
T Consensus 219 ~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp-~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 219 AWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSI-TANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp ECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECT-TTCCEEEEESSSCEEEEEE
T ss_pred EecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcC-CCCEEEEEcCCCeEEEEEE
Confidence 999986 7999999999999999876321 111223456889999999999 5668999999999999985
No 22
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.3e-38 Score=275.88 Aligned_cols=237 Identities=23% Similarity=0.391 Sum_probs=205.2
Q ss_pred cccCCCCcEEEEEec---CCEEEEEECCCeEEEEcCCC------ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCc
Q psy2107 111 DCILHDDWVSAIDFH---NDWILTGCYDHSVHIWTRRG------EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQT 181 (391)
Q Consensus 111 ~~~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~~~------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~ 181 (391)
.+.+|.++|++++|+ +++|++|+.||+|++|++.+ ..+..+.+|...|.+++| ++++.+|++|+.|++
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~---s~dg~~l~s~s~D~~ 88 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTL---TADGAYALSASWDKT 88 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEE---CTTSSEEEEEETTSE
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEE---CCCCCEEEEEeCCCE
Confidence 356899999999997 36999999999999999832 345678899999999999 788999999999999
Q ss_pred EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccccccc
Q psy2107 182 AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSS 261 (391)
Q Consensus 182 v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (391)
|++||+. ..+.+..+.+|...|.+++|+|++.+|++|+.|+.|++||++.
T Consensus 89 v~~wd~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-------------------------- 138 (319)
T 3frx_A 89 LRLWDVA----TGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-------------------------- 138 (319)
T ss_dssp EEEEETT----TTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS--------------------------
T ss_pred EEEEECC----CCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--------------------------
Confidence 9999964 4467788999999999999999999999999999999999853
Q ss_pred CCCCCceeeecCccCcccEEEeccCC-------eEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEe
Q psy2107 262 ASSRTPLITLKGHKEAISAVQWTAVD-------EIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITA 333 (391)
Q Consensus 262 ~~~~~~~~~~~~~~~~v~~~~~~~~~-------~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g 333 (391)
..+..+.+|...|.++.|.|.. .+++++.|+.|++||+++++....+..|. .|.+++|+|++++|++|
T Consensus 139 ----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~ 214 (319)
T 3frx_A 139 ----QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASA 214 (319)
T ss_dssp ----CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEE
T ss_pred ----CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEE
Confidence 3566788999999999998642 59999999999999999998888887665 89999999999999999
Q ss_pred eCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 334 SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 334 ~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
+.||.|++||++..+ .+..+.. ...|.+++|+| ++.++++++. +.+++|++
T Consensus 215 ~~dg~i~iwd~~~~~---~~~~~~~-~~~v~~~~~sp-~~~~la~~~~-~~i~v~~~ 265 (319)
T 3frx_A 215 GKDGEIMLWNLAAKK---AMYTLSA-QDEVFSLAFSP-NRYWLAAATA-TGIKVFSL 265 (319)
T ss_dssp ETTCEEEEEETTTTE---EEEEEEC-CSCEEEEEECS-SSSEEEEEET-TEEEEEEE
T ss_pred eCCCeEEEEECCCCc---EEEEecC-CCcEEEEEEcC-CCCEEEEEcC-CCcEEEEe
Confidence 999999999998765 5556654 46899999999 6677887775 46999986
No 23
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3e-39 Score=304.07 Aligned_cols=274 Identities=18% Similarity=0.270 Sum_probs=225.0
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR 143 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~ 143 (391)
...+|.++|+.++.. ..+.+.+|.... ......+.+|.+.|++++|+ |++||+|+.||+|+|||+
T Consensus 22 ~~~~~spdg~~l~~~-----------~~~~v~l~~~~~--~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~ 88 (611)
T 1nr0_A 22 VVLGNTPAGDKIQYC-----------NGTSVYTVPVGS--LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDT 88 (611)
T ss_dssp CCCEECTTSSEEEEE-----------ETTEEEEEETTC--SSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEES
T ss_pred eEEeeCCCCCEEEeC-----------CCCEEEEecCCC--cccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeEC
Confidence 456899999877641 345778886532 22344567899999999998 679999999999999998
Q ss_pred C---CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC----CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCC
Q psy2107 144 R---GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD----QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESR 216 (391)
Q Consensus 144 ~---~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 216 (391)
. ......+.+|.++|.+++| ++++.+|++++.+ +.|++||. . .....+.+|...|.+++|+|++
T Consensus 89 ~~~~~~~~~~~~~~~~~v~~v~f---s~dg~~l~~~~~~~~~~~~v~~wd~--~----~~~~~l~gh~~~v~~v~f~p~~ 159 (611)
T 1nr0_A 89 TQTTHILKTTIPVFSGPVKDISW---DSESKRIAAVGEGRERFGHVFLFDT--G----TSNGNLTGQARAMNSVDFKPSR 159 (611)
T ss_dssp SSTTCCEEEEEECSSSCEEEEEE---CTTSCEEEEEECCSSCSEEEEETTT--C----CBCBCCCCCSSCEEEEEECSSS
T ss_pred CCCcceeeEeecccCCceEEEEE---CCCCCEEEEEECCCCceeEEEEeeC--C----CCcceecCCCCCceEEEECCCC
Confidence 3 2344577889999999999 7789999998875 47888872 2 2345678999999999999998
Q ss_pred C-EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEEC
Q psy2107 217 Q-QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSW 294 (391)
Q Consensus 217 ~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~ 294 (391)
. .|++|+.|+.|++||..+ .+....+.+|...|.+++|+|++ .|++++.
T Consensus 160 ~~~l~s~s~D~~v~lwd~~~-----------------------------~~~~~~l~~H~~~V~~v~fspdg~~las~s~ 210 (611)
T 1nr0_A 160 PFRIISGSDDNTVAIFEGPP-----------------------------FKFKSTFGEHTKFVHSVRYNPDGSLFASTGG 210 (611)
T ss_dssp SCEEEEEETTSCEEEEETTT-----------------------------BEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CeEEEEEeCCCeEEEEECCC-----------------------------CeEeeeeccccCceEEEEECCCCCEEEEEEC
Confidence 6 699999999999999865 33567788999999999999765 5899999
Q ss_pred CCeEEEEecccCceeEEEE--------CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcc----------------
Q psy2107 295 DHTLKIWDAELGGMKSEIV--------GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGA---------------- 350 (391)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~--------~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~---------------- 350 (391)
|++|++||+.+++....+. +...|.+++|+|++++|++|+.|++|++||+++++..
T Consensus 211 D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~ 290 (611)
T 1nr0_A 211 DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGI 290 (611)
T ss_dssp TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEE
T ss_pred CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEE
Confidence 9999999999999888773 3348999999999999999999999999998764311
Q ss_pred ------------------------eEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 351 ------------------------IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 351 ------------------------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
.....+.+|...|++++|+| ++.+|++++.||+|++||++
T Consensus 291 ~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~ 354 (611)
T 1nr0_A 291 IWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDIS 354 (611)
T ss_dssp EECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETT
T ss_pred EEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECC
Confidence 12234568999999999999 66789999999999999974
No 24
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=7.4e-39 Score=285.54 Aligned_cols=244 Identities=20% Similarity=0.386 Sum_probs=197.9
Q ss_pred CCCcEEEEEec--CCEEEEEECCCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107 115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES 191 (391)
Q Consensus 115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 191 (391)
+...|++++|+ +++|++|+.||.|++||+. ++....+.+|...|.+++| ++++.+|++|+.|++|++||++
T Consensus 122 ~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~---~p~~~~l~s~s~d~~v~iwd~~--- 195 (393)
T 1erj_A 122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDY---FPSGDKLVSGSGDRTVRIWDLR--- 195 (393)
T ss_dssp CCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSEEEEEETT---
T ss_pred CceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEE---cCCCCEEEEecCCCcEEEEECC---
Confidence 44569999998 6799999999999999994 5566788899999999999 7788999999999999999965
Q ss_pred CceeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee
Q psy2107 192 NSIECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT 270 (391)
Q Consensus 192 ~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (391)
...+...+. +...+.+++|+| ++++|++|+.||.|++||++++...... ......
T Consensus 196 -~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~----------------------~~~~~~ 251 (393)
T 1erj_A 196 -TGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERL----------------------DSENES 251 (393)
T ss_dssp -TTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEE----------------------C-----
T ss_pred -CCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEee----------------------cccccC
Confidence 234444554 567899999999 8999999999999999999764421100 001112
Q ss_pred ecCccCcccEEEeccCC-eEEEEECCCeEEEEecccC------------ceeEEEECCe-eeEEEEECCCCCEEEEeeCC
Q psy2107 271 LKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELG------------GMKSEIVGNK-SFFDVHYSPLSKLVITASAD 336 (391)
Q Consensus 271 ~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~------------~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~d 336 (391)
..+|...|.+++|++++ .|++++.|+.|++||+++. .+...+..|. .|.+++|+|++.+|++|+.|
T Consensus 252 ~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D 331 (393)
T 1erj_A 252 GTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD 331 (393)
T ss_dssp -CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETT
T ss_pred CCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCC
Confidence 25799999999999655 5999999999999999763 3344555554 79999999999999999999
Q ss_pred CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCC-----CCCEEEEeeCCCcEEEEecC
Q psy2107 337 KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI-----DPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 337 g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~-----~~~~l~s~~~dg~v~iwdlr 391 (391)
+.|++||+++++ .+..+.+|...|.+++|++. ++.+|+||+.||+|+||+++
T Consensus 332 ~~v~iwd~~~~~---~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 332 RGVLFWDKKSGN---PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp SEEEEEETTTCC---EEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred CeEEEEECCCCe---EEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 999999998776 67788999999999999873 35689999999999999973
No 25
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.4e-38 Score=272.62 Aligned_cols=273 Identities=22% Similarity=0.377 Sum_probs=226.6
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR 143 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~ 143 (391)
....|.++++.+++ .+.++.+.+|...... ....+.+|...|.+++|+ +++|++|+.||.|++||+
T Consensus 27 ~~~~~s~~~~~l~s----------~~~dg~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 27 SSVKFSPNGEWLAS----------SSADKLIKIWGAYDGK--FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp EEEEECTTSSEEEE----------EETTSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEEEECCCCCEEEE----------eeCCCeEEEEeCCCcc--cchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 45688889887765 2357788888753322 233456799999999998 679999999999999999
Q ss_pred -CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEE
Q psy2107 144 -RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATG 222 (391)
Q Consensus 144 -~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg 222 (391)
++..+..+.+|...|.+++| ++++.++++|+.||.|++||++ ....+..+..|...|.+++|+|++++|++|
T Consensus 95 ~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~s~~~d~~i~iwd~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 167 (312)
T 4ery_A 95 SSGKCLKTLKGHSNYVFCCNF---NPQSNLIVSGSFDESVRIWDVK----TGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 167 (312)
T ss_dssp TTCCEEEEEECCSSCEEEEEE---CSSSSEEEEEETTSCEEEEETT----TCCEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCCcEEEEEcCCCCCEEEEEE---cCCCCEEEEEeCCCcEEEEECC----CCEEEEEecCCCCcEEEEEEcCCCCEEEEE
Confidence 56677788899999999999 7788999999999999999965 345677888999999999999999999999
Q ss_pred eCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee-cCccCcccEEEeccCC-eEEEEECCCeEEE
Q psy2107 223 GWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL-KGHKEAISAVQWTAVD-EIITSSWDHTLKI 300 (391)
Q Consensus 223 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~-~l~s~~~dg~i~i 300 (391)
+.||.|++||+++++ .+..+ ..+...+..++|+|++ .+++++.|+.|++
T Consensus 168 ~~d~~i~~wd~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i 218 (312)
T 4ery_A 168 SYDGLCRIWDTASGQ-----------------------------CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 218 (312)
T ss_dssp ETTSCEEEEETTTCC-----------------------------EEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred eCCCcEEEEECCCCc-----------------------------eeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEE
Confidence 999999999997633 23333 3566789999999655 5899999999999
Q ss_pred EecccCceeEEEECCe----eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEE
Q psy2107 301 WDAELGGMKSEIVGNK----SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLF 376 (391)
Q Consensus 301 wd~~~~~~~~~~~~~~----~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 376 (391)
||+++++.+..+..+. .+......+++.+|++|+.||.|++||+...+ ++..+.+|...|.+++|+| ++.++
T Consensus 219 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~p-~~~~l 294 (312)
T 4ery_A 219 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE---IVQKLQGHTDVVISTACHP-TENII 294 (312)
T ss_dssp EETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC---EEEEECCCSSCEEEEEECS-SSSEE
T ss_pred EECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch---hhhhhhccCCcEEEEeecC-cCCce
Confidence 9999999988887664 23333344678999999999999999998776 7788999999999999999 66788
Q ss_pred EEee--CCCcEEEEec
Q psy2107 377 VSAS--FDNSVKLWDL 390 (391)
Q Consensus 377 ~s~~--~dg~v~iwdl 390 (391)
++++ .|++|++|+.
T Consensus 295 ~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 295 ASAALENDKTIKLWKS 310 (312)
T ss_dssp EEEECTTTCCEEEEEC
T ss_pred EEEEccCCccEEEecC
Confidence 8887 6999999986
No 26
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.2e-39 Score=280.85 Aligned_cols=259 Identities=19% Similarity=0.346 Sum_probs=210.2
Q ss_pred CccceEEEEEEeccCCC-----CCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEE
Q psy2107 91 SSENVIDVEYLESTPTP-----SPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVA 162 (391)
Q Consensus 91 ~~~~~~~~~~~~~~~~~-----~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~ 162 (391)
+.++.+++|........ ....+.+|...|++++|+ +.++++|+.||+|++||+ ++..+..+.+|...|.+++
T Consensus 46 s~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~ 125 (343)
T 2xzm_R 46 SRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVA 125 (343)
T ss_dssp ETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEE
T ss_pred cCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEE
Confidence 46789999987543221 123456899999999998 669999999999999999 5677778899999999999
Q ss_pred EEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe---cCCCCeEEEEEcCCC----------CEEEEEeCCCcEE
Q psy2107 163 WLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR---GHERGLETVTVSESR----------QQFATGGWDCLLK 229 (391)
Q Consensus 163 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~---~~~~~v~~l~~~~~~----------~~l~sg~~dg~i~ 229 (391)
| ++++.+|++|+.|++|++||+. . ....... +|...|.+++|+|++ .+|++++.||.|+
T Consensus 126 ~---sp~~~~l~s~~~d~~i~~wd~~--~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 197 (343)
T 2xzm_R 126 F---SPDNRQILSAGAEREIKLWNIL--G---ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLK 197 (343)
T ss_dssp E---CSSTTEEEEEETTSCEEEEESS--S---CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEE
T ss_pred E---CCCCCEEEEEcCCCEEEEEecc--C---CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEE
Confidence 9 7788999999999999999964 2 1222222 688999999999986 7899999999999
Q ss_pred EEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecc-cCc
Q psy2107 230 IWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAE-LGG 307 (391)
Q Consensus 230 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~-~~~ 307 (391)
+||.. ......+.+|...|.+++|+|++ .|++|+.|+.|++||+. ...
T Consensus 198 iwd~~------------------------------~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~ 247 (343)
T 2xzm_R 198 VWNTN------------------------------FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTY 247 (343)
T ss_dssp EEETT------------------------------TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSS
T ss_pred EEcCC------------------------------CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcc
Confidence 99953 22456778999999999999765 59999999999999994 455
Q ss_pred eeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec-----------cccCcEEEEEECCCCCCEE
Q psy2107 308 MKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS-----------SHKEWVQSVRWSPIDPQLF 376 (391)
Q Consensus 308 ~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~-----------~h~~~v~~~~~~~~~~~~l 376 (391)
....+.....+.+++|+|++.++++| .|+.|++||+.+..... ...+. +|...|++++|+| ++.+|
T Consensus 248 ~~~~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~g~~l 324 (343)
T 2xzm_R 248 PQREFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAP-VCTIEAEPITKAEGQKGKNPQCTSLAWNA-LGKKL 324 (343)
T ss_dssp CSEEEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCS-EEECCCCSGGGBTTBCCSCCCEEEEEECS-SSCCE
T ss_pred cceeecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCc-eEEeecCcchhhhhhcCCCCceEEEEECC-CCCeE
Confidence 56666666789999999999988766 47889999987654322 11222 6888999999999 55679
Q ss_pred EEeeCCCcEEEEec
Q psy2107 377 VSASFDNSVKLWDL 390 (391)
Q Consensus 377 ~s~~~dg~v~iwdl 390 (391)
++|+.||.|++||+
T Consensus 325 ~sg~~Dg~v~~w~~ 338 (343)
T 2xzm_R 325 FAGFTDGVIRTFSF 338 (343)
T ss_dssp EEEETTSEEEEEEE
T ss_pred EEecCCceEEEEEE
Confidence 99999999999997
No 27
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.2e-38 Score=272.79 Aligned_cols=243 Identities=26% Similarity=0.487 Sum_probs=210.3
Q ss_pred CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107 110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE 186 (391)
Q Consensus 110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd 186 (391)
..+.+|.+.|++++|+ +++|++|+.||.|++|+. ++.....+.+|...|.+++| ++++++|++|+.||.|++||
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~---~~~~~~l~s~~~d~~i~vwd 93 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW---SSDSNLLVSASDDKTLKIWD 93 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSEEEEEE
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEE---cCCCCEEEEECCCCEEEEEE
Confidence 3456899999999998 669999999999999999 56777788899999999999 77899999999999999999
Q ss_pred ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107 187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT 266 (391)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (391)
++ ...++..+.+|...|.+++|+|++++|++|+.||.|++||+++ .+
T Consensus 94 ~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~-----------------------------~~ 140 (312)
T 4ery_A 94 VS----SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT-----------------------------GK 140 (312)
T ss_dssp TT----TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT-----------------------------CC
T ss_pred CC----CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC-----------------------------CE
Confidence 65 3456788899999999999999999999999999999999976 33
Q ss_pred ceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECC--eeeEEEEECCCCCEEEEeeCCCcEEEEc
Q psy2107 267 PLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGN--KSFFDVHYSPLSKLVITASADKQIRLYD 343 (391)
Q Consensus 267 ~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~i~~~~~~p~~~~l~~g~~dg~i~iwd 343 (391)
.+..+..|..+|.+++|++++ .+++++.|+.|++||+++++.+..+... .++..++|+|++++|++++.|+.|++||
T Consensus 141 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd 220 (312)
T 4ery_A 141 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 220 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred EEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 567788899999999999654 6899999999999999999888776533 3789999999999999999999999999
Q ss_pred CCCCCcceEEEEeccccCcEE--EEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 344 PKVKEGAIVKSTFSSHKEWVQ--SVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 344 ~~~~~~~~~~~~~~~h~~~v~--~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
++..+ ....+.+|...+. ...+++.++.+|++|+.||.|++||++
T Consensus 221 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~ 267 (312)
T 4ery_A 221 YSKGK---CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 267 (312)
T ss_dssp TTTTE---EEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETT
T ss_pred CCCCc---EEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECC
Confidence 98765 6677777766433 334554477899999999999999974
No 28
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.7e-38 Score=296.42 Aligned_cols=266 Identities=27% Similarity=0.440 Sum_probs=228.9
Q ss_pred eeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCC
Q psy2107 67 QFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRR 144 (391)
Q Consensus 67 ~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~ 144 (391)
...|.++++.+.+ .+.++.+++|... ......+.+|...|.+++|+ ++++++++.||.|++||.+
T Consensus 308 ~~~~~~~~~~l~t----------~~~d~~i~~w~~~---~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~ 374 (577)
T 2ymu_A 308 GVAFSPDGQTIAS----------ASDDKTVKLWNRN---GQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN 374 (577)
T ss_dssp EEEECTTSSEEEE----------EETTSCEEEEETT---SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEEECCCCCEEEE----------EeCCCeEEEEeCC---CCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC
Confidence 4577778776654 2356778888642 22234556799999999998 6699999999999999999
Q ss_pred CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC
Q psy2107 145 GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW 224 (391)
Q Consensus 145 ~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~ 224 (391)
++.+..+.+|...|.+++| ++++.+|++++.|+.|++||. ..+.+..+.+|...|++++|+|++++|++++.
T Consensus 375 ~~~~~~~~~~~~~v~~~~~---s~dg~~l~~~~~d~~v~~~~~-----~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~ 446 (577)
T 2ymu_A 375 GQLLQTLTGHSSSVRGVAF---SPDGQTIASASDDKTVKLWNR-----NGQLLQTLTGHSSSVWGVAFSPDDQTIASASD 446 (577)
T ss_dssp CCEEEEEECCSSCEEEEEE---CTTSSCEEEEETTSEEEEECT-----TCCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred CCEEEEecCCCCCeEEEEE---CCCCCEEEEEeCCCEEEEEeC-----CCCEEEEecCCCCCeEEEEECCCCCEEEEEcC
Confidence 8888999999999999999 778999999999999999983 23567788899999999999999999999999
Q ss_pred CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEec
Q psy2107 225 DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDA 303 (391)
Q Consensus 225 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~ 303 (391)
|+.|++||... +.+..+.+|...|.+++|+|++ .|++++.|+.|++||.
T Consensus 447 d~~v~~w~~~~------------------------------~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~ 496 (577)
T 2ymu_A 447 DKTVKLWNRNG------------------------------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 496 (577)
T ss_dssp TSEEEEEETTS------------------------------CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET
T ss_pred CCEEEEEECCC------------------------------CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC
Confidence 99999999742 3566788999999999999765 5889999999999995
Q ss_pred ccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCC
Q psy2107 304 ELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD 382 (391)
Q Consensus 304 ~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 382 (391)
+++.+..+..|. .|.+++|+|++++|++++.|+.|++||. +++ ++..+.+|.+.|++++|+| ++++|+|++.|
T Consensus 497 -~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~---~~~~~~~h~~~v~~~~fs~-dg~~l~s~~~D 570 (577)
T 2ymu_A 497 -NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQ---LLQTLTGHSSSVWGVAFSP-DGQTIASASSD 570 (577)
T ss_dssp -TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSC---EEEEEECCSSCEEEEEECT-TSSCEEEEETT
T ss_pred -CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCC---EEEEEcCCCCCEEEEEEcC-CCCEEEEEeCC
Confidence 678888888765 8999999999999999999999999996 333 6778899999999999999 56679999999
Q ss_pred CcEEEEe
Q psy2107 383 NSVKLWD 389 (391)
Q Consensus 383 g~v~iwd 389 (391)
|+|++||
T Consensus 571 ~~i~~Wd 577 (577)
T 2ymu_A 571 KTVKLWN 577 (577)
T ss_dssp SCEEEEC
T ss_pred CEEEEeC
Confidence 9999998
No 29
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7.2e-39 Score=281.60 Aligned_cols=243 Identities=16% Similarity=0.230 Sum_probs=196.6
Q ss_pred cCCCCcEEEEEec--CCEEEEEEC------CCeEEEEcCC-Cce----EEeccCCCCCeeEEEEEecCCCCeEEEEEeCC
Q psy2107 113 ILHDDWVSAIDFH--NDWILTGCY------DHSVHIWTRR-GEH----KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD 179 (391)
Q Consensus 113 ~~h~~~V~~~~~~--~~~l~t~~~------dg~i~iwd~~-~~~----~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d 179 (391)
..|...|++++|+ |++|++|+. ||.|++|+.. +.. .....+|...|.+++|+ +++. +++++.|
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s---~d~~-~l~~s~d 114 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWV---SEKG-ILVASDS 114 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEE---TTTE-EEEEETT
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEc---CCCC-EEEEECC
Confidence 4699999999998 679999997 7889999873 322 22334688999999995 4554 5678889
Q ss_pred CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccccc
Q psy2107 180 QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEY 259 (391)
Q Consensus 180 g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (391)
|+|++||+..............+|...|.+++|+|++++|++|+.||.|++||+++
T Consensus 115 g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~------------------------ 170 (357)
T 4g56_B 115 GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQ------------------------ 170 (357)
T ss_dssp SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT------------------------
T ss_pred CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC------------------------
Confidence 99999997643322222344568999999999999999999999999999999976
Q ss_pred ccCCCCCceeeecCccCcccEEEeccCC--eEEEEECCCeEEEEecccCceeEEEEC---CeeeEEEEECCC-CCEEEEe
Q psy2107 260 SSASSRTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKSEIVG---NKSFFDVHYSPL-SKLVITA 333 (391)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~i~~~~~~p~-~~~l~~g 333 (391)
...+..+.+|...|.+++|++++ .+++++.|+.|++||+++++....+.. ...+.+++|+|+ +.+|++|
T Consensus 171 -----~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g 245 (357)
T 4g56_B 171 -----KAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACG 245 (357)
T ss_dssp -----TEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEE
T ss_pred -----CcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEe
Confidence 34677888999999999999543 589999999999999999887766543 337899999998 5689999
Q ss_pred eCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 334 SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 334 ~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+.|+.|++||+++.+ ....+.+|...|++++|+|+++.+|++|+.||+|+|||++
T Consensus 246 ~~d~~i~~wd~~~~~---~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~ 300 (357)
T 4g56_B 246 DETGNVSLVNIKNPD---SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDAD 300 (357)
T ss_dssp ESSSCEEEEESSCGG---GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred ecccceeEEECCCCc---EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECC
Confidence 999999999998765 6678889999999999999777889999999999999974
No 30
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.2e-37 Score=278.68 Aligned_cols=262 Identities=20% Similarity=0.361 Sum_probs=223.6
Q ss_pred ccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCC
Q psy2107 92 SENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDG 168 (391)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~ 168 (391)
.++.+.+|..........+...+|.+.|+||+|+ |++|++|+.||+|+|||+ +++.+..+.+|...+.++++
T Consensus 123 ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~----- 197 (420)
T 4gga_A 123 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW----- 197 (420)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE-----
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee-----
Confidence 4678889976544333344556789999999998 679999999999999999 56777889999999999998
Q ss_pred CCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC
Q psy2107 169 KDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDE 248 (391)
Q Consensus 169 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~ 248 (391)
++.++++|+.|+.+++||... ....+..+.+|...+..+.++|+++++++++.|+.+++|+..+++..
T Consensus 198 ~~~~l~sgs~d~~i~~~d~~~---~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~--------- 265 (420)
T 4gga_A 198 NSYILSSGSRSGHIHHHDVRV---AEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG--------- 265 (420)
T ss_dssp ETTEEEEEETTSEEEEEETTS---SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSC---------
T ss_pred CCCEEEEEeCCCceeEeeecc---cceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecccccc---------
Confidence 456899999999999999653 23456778899999999999999999999999999999999875431
Q ss_pred CccccccccccccCCCCCceeeecCccCcccEEEeccCC--eEEEE--ECCCeEEEEecccCceeEEEECCeeeEEEEEC
Q psy2107 249 GTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD--EIITS--SWDHTLKIWDAELGGMKSEIVGNKSFFDVHYS 324 (391)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~ 324 (391)
...+.....|...|.+++|+|.+ .++++ +.|++|++||+.++++...+..+..+.++.|+
T Consensus 266 ----------------~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~ 329 (420)
T 4gga_A 266 ----------------WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWS 329 (420)
T ss_dssp ----------------SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEE
T ss_pred ----------------ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeec
Confidence 23456677899999999999643 35543 57999999999999999999999999999999
Q ss_pred CCCCEEEEee--CCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 325 PLSKLVITAS--ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 325 p~~~~l~~g~--~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
|+++.+++++ .|+.|+|||+.+.+ ++..+.+|.+.|++++|+| ++.+|+||+.||+|+|||+
T Consensus 330 ~~~~~lv~~sg~~d~~I~iwd~~~~~---~v~~l~gH~~~V~~l~~sp-dg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 330 PHYKELISGHGFAQNQLVIWKYPTMA---KVAELKGHTSRVLSLTMSP-DGATVASAAADETLRLWRC 393 (420)
T ss_dssp TTTTEEEEEECTTTCCEEEEETTTCC---EEEEECCCSSCEEEEEECT-TSSCEEEEETTTEEEEECC
T ss_pred CCCCeEEEEEecCCCEEEEEECCCCc---EEEEEcCCCCCEEEEEEcC-CCCEEEEEecCCeEEEEEC
Confidence 9999888765 78999999998876 7889999999999999999 5668999999999999997
No 31
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.5e-37 Score=272.08 Aligned_cols=241 Identities=21% Similarity=0.345 Sum_probs=195.3
Q ss_pred cccCCCCcEEEEEe--------cCCEEEEEECCCeEEEEcCCC--------ceEEeccCCCCCeeEEEEEecCCCCeEEE
Q psy2107 111 DCILHDDWVSAIDF--------HNDWILTGCYDHSVHIWTRRG--------EHKLNIPGHGGPVKGVAWLYNDGKDAAFI 174 (391)
Q Consensus 111 ~~~~h~~~V~~~~~--------~~~~l~t~~~dg~i~iwd~~~--------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~ 174 (391)
.+.+|.++|++++| ++.+|++|+.|++|++||+.. .....+.+|...|.+++| ++++.+++
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~---~~~~~~l~ 92 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLAL---SQENCFAI 92 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEE---CSSTTEEE
T ss_pred eeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEE---CCCCCEEE
Confidence 35689999999999 356999999999999999842 234577899999999999 77889999
Q ss_pred EEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccc
Q psy2107 175 SVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKK 254 (391)
Q Consensus 175 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 254 (391)
+|+.|++|++||++ ....+..+.+|...|.+++|+|++++|++|+.|+.|++||+.....
T Consensus 93 s~s~D~~v~lwd~~----~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~---------------- 152 (343)
T 2xzm_R 93 SSSWDKTLRLWDLR----TGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECK---------------- 152 (343)
T ss_dssp EEETTSEEEEEETT----SSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEE----------------
T ss_pred EEcCCCcEEEEECC----CCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCce----------------
Confidence 99999999999965 3356788899999999999999999999999999999999863111
Q ss_pred cccccccCCCCCceeeecCccCcccEEEeccC-----------CeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEE
Q psy2107 255 RKKEYSSASSRTPLITLKGHKEAISAVQWTAV-----------DEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVH 322 (391)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~ 322 (391)
........|...|.+++|+|. ..+++++.|+.|++||. ..+....+..|. .|.+++
T Consensus 153 -----------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~ 220 (343)
T 2xzm_R 153 -----------FSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLS 220 (343)
T ss_dssp -----------EECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEE
T ss_pred -----------eeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEE
Confidence 011112368889999999975 36999999999999994 456666666654 899999
Q ss_pred ECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 323 YSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 323 ~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
|+|+|++|++|+.||.|++||+..... ....+ .+...|++++|+| ++.+++ ++.|+.|++||+.
T Consensus 221 ~s~~g~~l~sgs~dg~v~iwd~~~~~~--~~~~~-~~~~~v~~v~~sp-~~~~la-~~~d~~v~iw~~~ 284 (343)
T 2xzm_R 221 ISPNGKYIATGGKDKKLLIWDILNLTY--PQREF-DAGSTINQIAFNP-KLQWVA-VGTDQGVKIFNLM 284 (343)
T ss_dssp ECTTSSEEEEEETTCEEEEEESSCCSS--CSEEE-ECSSCEEEEEECS-SSCEEE-EEESSCEEEEESS
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCcc--cceee-cCCCcEEEEEECC-CCCEEE-EECCCCEEEEEeC
Confidence 999999999999999999999854332 22222 3456799999999 556555 5568899999973
No 32
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.7e-37 Score=271.49 Aligned_cols=272 Identities=19% Similarity=0.269 Sum_probs=213.0
Q ss_pred cccCCCCcEEEEEec---CCEEEEEECCCeEEEEcCCC------ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCc
Q psy2107 111 DCILHDDWVSAIDFH---NDWILTGCYDHSVHIWTRRG------EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQT 181 (391)
Q Consensus 111 ~~~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~~~------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~ 181 (391)
++.||.+.|++|+|+ +++|+||+.||+|+|||+.. .....+.+|...|.+++| ++++.+|++|+.|+.
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~---s~dg~~l~s~~~d~~ 109 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI---SSDGQFALSGSWDGT 109 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSE
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEE---CCCCCEEEEEccccc
Confidence 356899999999998 46999999999999999842 235577899999999999 778999999999999
Q ss_pred EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCC-------------CCCCC
Q psy2107 182 AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPS-------------ENGDE 248 (391)
Q Consensus 182 v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~-------------~~~~~ 248 (391)
|++|+.. ..........+...+..+.+++++++|++|+.|+.+++||........... .....
T Consensus 110 i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 185 (340)
T 4aow_A 110 LRLWDLT----TGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 185 (340)
T ss_dssp EEEEETT----TTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSS
T ss_pred ceEEeec----ccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCC
Confidence 9999954 334556667788899999999999999999999999999987543211100 00000
Q ss_pred ---CccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCeeeEEEEEC
Q psy2107 249 ---GTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYS 324 (391)
Q Consensus 249 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~ 324 (391)
...........++.........+.+|...|.+++|+|++ .|++|+.|+.|++||+++.+.+..+..+..+.+++|+
T Consensus 186 ~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~ 265 (340)
T 4aow_A 186 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFS 265 (340)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEEC
T ss_pred cEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecC
Confidence 001111222344555667778888999999999999655 5899999999999999999999999999999999999
Q ss_pred CCCCEEEEeeCCCcEEEEcCCCCCc------ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 325 PLSKLVITASADKQIRLYDPKVKEG------AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 325 p~~~~l~~g~~dg~i~iwd~~~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
|++.+++ ++.|+.|++||++.... ........+|...|++++|+| ++.+|++|+.||.|+|||++
T Consensus 266 ~~~~~~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 266 PNRYWLC-AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA-DGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp SSSSEEE-EEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECT-TSSEEEEEETTSCEEEEEEE
T ss_pred CCCceee-ccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEeCC
Confidence 9876555 55699999999876431 111223457889999999999 66789999999999999974
No 33
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.3e-37 Score=291.24 Aligned_cols=273 Identities=17% Similarity=0.212 Sum_probs=223.9
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECC----CeEE
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYD----HSVH 139 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~d----g~i~ 139 (391)
....|.++|+++++ .+.++.+++|............+.+|.++|.+++|+ ++.|++++.+ +.|+
T Consensus 63 ~~~~~spdg~~las----------g~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~ 132 (611)
T 1nr0_A 63 TVAKTSPSGYYCAS----------GDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVF 132 (611)
T ss_dssp EEEEECTTSSEEEE----------EETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEE
T ss_pred EEEEECCCCcEEEE----------EeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEE
Confidence 45689999998876 346889999987433322233456799999999998 6688888865 5899
Q ss_pred EEcCCCceEEeccCCCCCeeEEEEEecCCCCe-EEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCE
Q psy2107 140 IWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDA-AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQ 218 (391)
Q Consensus 140 iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 218 (391)
+||. +.....+.+|...|.+++| +|++. .|++|+.|++|++||.. ..++...+.+|...|.+++|+|++++
T Consensus 133 ~wd~-~~~~~~l~gh~~~v~~v~f---~p~~~~~l~s~s~D~~v~lwd~~----~~~~~~~l~~H~~~V~~v~fspdg~~ 204 (611)
T 1nr0_A 133 LFDT-GTSNGNLTGQARAMNSVDF---KPSRPFRIISGSDDNTVAIFEGP----PFKFKSTFGEHTKFVHSVRYNPDGSL 204 (611)
T ss_dssp ETTT-CCBCBCCCCCSSCEEEEEE---CSSSSCEEEEEETTSCEEEEETT----TBEEEEEECCCSSCEEEEEECTTSSE
T ss_pred EeeC-CCCcceecCCCCCceEEEE---CCCCCeEEEEEeCCCeEEEEECC----CCeEeeeeccccCceEEEEECCCCCE
Confidence 9995 4455678899999999999 55665 69999999999999943 45677889999999999999999999
Q ss_pred EEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee-------cCccCcccEEEeccCC-eEE
Q psy2107 219 FATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL-------KGHKEAISAVQWTAVD-EII 290 (391)
Q Consensus 219 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~-~l~ 290 (391)
|++|+.|+.|++||+.+++. ...+ .+|...|.+++|+|++ .|+
T Consensus 205 las~s~D~~i~lwd~~~g~~-----------------------------~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~ 255 (611)
T 1nr0_A 205 FASTGGDGTIVLYNGVDGTK-----------------------------TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA 255 (611)
T ss_dssp EEEEETTSCEEEEETTTCCE-----------------------------EEECBCTTSSSCSSSSCEEEEEECTTSSEEE
T ss_pred EEEEECCCcEEEEECCCCcE-----------------------------eeeeccccccccccCCCEEEEEECCCCCEEE
Confidence 99999999999999876432 2222 2799999999999765 599
Q ss_pred EEECCCeEEEEecccCceeEEEE-------------------------------------------CC-eeeEEEEECCC
Q psy2107 291 TSSWDHTLKIWDAELGGMKSEIV-------------------------------------------GN-KSFFDVHYSPL 326 (391)
Q Consensus 291 s~~~dg~i~iwd~~~~~~~~~~~-------------------------------------------~~-~~i~~~~~~p~ 326 (391)
+++.|++|++||+.+++.+.++. +| ..|.+++|+|+
T Consensus 256 s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spd 335 (611)
T 1nr0_A 256 SASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSAD 335 (611)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred EEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCC
Confidence 99999999999999877655442 23 37899999999
Q ss_pred CCEEEEeeCCCcEEEEcCCCCCcceEEEEe-ccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 327 SKLVITASADKQIRLYDPKVKEGAIVKSTF-SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 327 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
|++|++|+.|+.|++||+.++. ....+ .+|...|.+++|++ ++ .+++++.|+.+++|++
T Consensus 336 g~~l~s~s~D~~v~~Wd~~~~~---~~~~~~~~h~~~v~~~~~s~-~~-~l~s~s~d~~v~~w~~ 395 (611)
T 1nr0_A 336 GKTLFSADAEGHINSWDISTGI---SNRVFPDVHATMITGIKTTS-KG-DLFTVSWDDHLKVVPA 395 (611)
T ss_dssp SSEEEEEETTSCEEEEETTTCC---EEECSSCSCSSCEEEEEECT-TS-CEEEEETTTEEEEECS
T ss_pred CCEEEEEeCCCcEEEEECCCCc---eeeecccCCcceEEEEEECC-CC-cEEEEEcCCceEEeec
Confidence 9999999999999999998765 44343 57999999999998 55 4889999999999986
No 34
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.7e-37 Score=274.85 Aligned_cols=301 Identities=17% Similarity=0.194 Sum_probs=233.2
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR 143 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~ 143 (391)
....|.++++++++ ...++.+.+|............+.+|...|++++|+ +++|++++.||.|++||+
T Consensus 12 ~~~~~s~~~~~l~~----------~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 81 (372)
T 1k8k_C 12 SCHAWNKDRTQIAI----------CPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 81 (372)
T ss_dssp CEEEECTTSSEEEE----------ECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred EEEEECCCCCEEEE----------EeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEEC
Confidence 45688899987765 235788999987654311344556799999999998 779999999999999999
Q ss_pred CCce---EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEE
Q psy2107 144 RGEH---KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFA 220 (391)
Q Consensus 144 ~~~~---~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~ 220 (391)
.... ...+..|...|.+++| ++++.+|++++.||.|++||++.............+|...|.+++|+|++++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 158 (372)
T 1k8k_C 82 KGRTWKPTLVILRINRAARCVRW---APNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLA 158 (372)
T ss_dssp ETTEEEEEEECCCCSSCEEEEEE---CTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEE
T ss_pred CCCeeeeeEEeecCCCceeEEEE---CCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEE
Confidence 5443 3345789999999999 778899999999999999998754432223333467899999999999999999
Q ss_pred EEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEE
Q psy2107 221 TGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLK 299 (391)
Q Consensus 221 sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~ 299 (391)
+|+.||.|++||++........... ...........+..+..|...|.+++|++++ .+++++.|+.|+
T Consensus 159 ~~~~dg~i~~~d~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 227 (372)
T 1k8k_C 159 AGSCDFKCRIFSAYIKEVEERPAPT-----------PWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVC 227 (372)
T ss_dssp EEETTSCEEEEECCCTTTSCCCCCB-----------TTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEE
T ss_pred EEcCCCCEEEEEccccccccccccc-----------ccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEE
Confidence 9999999999998653321110000 0000012345667777899999999999655 699999999999
Q ss_pred EEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCC--CCc---------------------------
Q psy2107 300 IWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKV--KEG--------------------------- 349 (391)
Q Consensus 300 iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~--~~~--------------------------- 349 (391)
+||+++++.+..+..+. ++.+++|+|++.++++| .|+.|++|+++. +..
T Consensus 228 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (372)
T 1k8k_C 228 LADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLD 306 (372)
T ss_dssp EEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCC
T ss_pred EEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcc
Confidence 99999999999998776 89999999999999888 899999999876 210
Q ss_pred --ceEE------EEe-ccccCcEEEEEECCCCC---CEEEEeeCCCcEEEEecC
Q psy2107 350 --AIVK------STF-SSHKEWVQSVRWSPIDP---QLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 350 --~~~~------~~~-~~h~~~v~~~~~~~~~~---~~l~s~~~dg~v~iwdlr 391 (391)
.... ..+ .+|...|++++|++.++ .+|+||+.||.|++||++
T Consensus 307 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 307 KKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp CCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred cccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence 0000 222 48999999999886566 899999999999999973
No 35
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-38 Score=284.02 Aligned_cols=291 Identities=20% Similarity=0.366 Sum_probs=232.4
Q ss_pred ceeeEEeCCe-EehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEc
Q psy2107 66 IQFDFLIAGE-LLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWT 142 (391)
Q Consensus 66 ~~~~f~~~~~-~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd 142 (391)
....|.++++ ++++.-..--.....+.++.+.+|.........+.....|...|++++|+ +++|++|+.||.|++||
T Consensus 16 ~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~ 95 (416)
T 2pm9_A 16 ATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYS 95 (416)
T ss_dssp CBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEEC
T ss_pred ceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEee
Confidence 3467888885 66542100000001156788999988765544455566799999999998 66999999999999999
Q ss_pred CCC-----ceEEeccCCCCCeeEEEEEecCCC-CeEEEEEeCCCcEEEEeecCCCC-----ceeEEEEEecCCCCeEEEE
Q psy2107 143 RRG-----EHKLNIPGHGGPVKGVAWLYNDGK-DAAFISVSTDQTAMIWEWKVESN-----SIECIHVCRGHERGLETVT 211 (391)
Q Consensus 143 ~~~-----~~~~~~~~~~~~v~~l~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~-----~~~~~~~~~~~~~~v~~l~ 211 (391)
+.. .....+.+|...|.+++| +++ +.+|++++.||.|++||+..... .......+..|...|.+++
T Consensus 96 ~~~~~~~~~~~~~~~~h~~~v~~~~~---~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 172 (416)
T 2pm9_A 96 TNEANNAINSMARFSNHSSSVKTVKF---NAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLA 172 (416)
T ss_dssp CSSTTSCCCEEEECCCSSSCCCEEEE---CSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEE
T ss_pred cccccccccchhhccCCccceEEEEE---cCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEE
Confidence 954 477788899999999999 555 78999999999999999764331 1112233467899999999
Q ss_pred EcCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc------cCcccEEEec
Q psy2107 212 VSES-RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH------KEAISAVQWT 284 (391)
Q Consensus 212 ~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~ 284 (391)
|+|+ +.+|++++.||.|++||+++++ .+..+..| ...|.+++|+
T Consensus 173 ~~~~~~~~l~~~~~dg~v~iwd~~~~~-----------------------------~~~~~~~~~~~~~~~~~v~~~~~~ 223 (416)
T 2pm9_A 173 WNQSLAHVFASAGSSNFASIWDLKAKK-----------------------------EVIHLSYTSPNSGIKQQLSVVEWH 223 (416)
T ss_dssp ECSSCTTEEEEESSSSCEEEEETTTTE-----------------------------EEEEECCCCCSSCCCCCEEEEEEC
T ss_pred eCCCCCcEEEEEcCCCCEEEEECCCCC-----------------------------cceEEeccccccccCCceEEEEEC
Confidence 9998 7899999999999999997633 34444444 7889999999
Q ss_pred cCC--eEEEEECCC---eEEEEecccC-ceeEEEE-C-CeeeEEEEECC-CCCEEEEeeCCCcEEEEcCCCCCcceEEEE
Q psy2107 285 AVD--EIITSSWDH---TLKIWDAELG-GMKSEIV-G-NKSFFDVHYSP-LSKLVITASADKQIRLYDPKVKEGAIVKST 355 (391)
Q Consensus 285 ~~~--~l~s~~~dg---~i~iwd~~~~-~~~~~~~-~-~~~i~~~~~~p-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 355 (391)
|++ .+++++.|+ .|++||++++ .....+. . ...+.+++|+| ++++|++++.|+.|++||+++.+ .+..
T Consensus 224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~---~~~~ 300 (416)
T 2pm9_A 224 PKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE---QLSQ 300 (416)
T ss_dssp SSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC---EEEE
T ss_pred CCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc---ccee
Confidence 764 689999998 9999999986 5666666 3 45899999999 89999999999999999998776 7778
Q ss_pred eccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 356 FSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 356 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+.+|...|++++|+|+++.+|++++.||.|++||++
T Consensus 301 ~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 301 FPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp EECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred ecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence 889999999999999665899999999999999984
No 36
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-36 Score=270.40 Aligned_cols=251 Identities=19% Similarity=0.308 Sum_probs=208.0
Q ss_pred CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCC---CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEE
Q psy2107 110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRR---GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMI 184 (391)
Q Consensus 110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~---~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~i 184 (391)
..+.+|.+.|++++|+ +++|++|+.||.|+|||+. ......+.+|...|++++|+|. .++.+|++|+.||.|++
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~~l~s~~~dg~v~i 83 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP-KFGTILASCSYDGKVLI 83 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCG-GGCSEEEEEETTSCEEE
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCC-CCCCEEEEeccCCEEEE
Confidence 3456799999999998 6799999999999999984 3445578899999999999431 23789999999999999
Q ss_pred EeecCCCCceeEEEEEecCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107 185 WEWKVESNSIECIHVCRGHERGLETVTVSES--RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA 262 (391)
Q Consensus 185 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (391)
||+. ......+..+..|...|.+++|+|+ +.+|++++.||.|++||++....
T Consensus 84 wd~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~------------------------ 137 (379)
T 3jrp_A 84 WKEE--NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT------------------------ 137 (379)
T ss_dssp EEEE--TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC------------------------
T ss_pred EEcC--CCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc------------------------
Confidence 9976 3444577888889999999999999 99999999999999999976432
Q ss_pred CCCCceeeecCccCcccEEEecc--------------CCeEEEEECCCeEEEEecccCce----eEEEECC-eeeEEEEE
Q psy2107 263 SSRTPLITLKGHKEAISAVQWTA--------------VDEIITSSWDHTLKIWDAELGGM----KSEIVGN-KSFFDVHY 323 (391)
Q Consensus 263 ~~~~~~~~~~~~~~~v~~~~~~~--------------~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~-~~i~~~~~ 323 (391)
.....+..|...|.+++|+| +..+++++.|+.|++||++++.. ...+..| ..|.+++|
T Consensus 138 ---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~ 214 (379)
T 3jrp_A 138 ---TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 214 (379)
T ss_dssp ---CCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred ---eeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEE
Confidence 24456778999999999997 45699999999999999987653 3445444 48999999
Q ss_pred CCC---CCEEEEeeCCCcEEEEcCCCCCcceEEEEe--ccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 324 SPL---SKLVITASADKQIRLYDPKVKEGAIVKSTF--SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 324 ~p~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+|+ +++|++++.||.|++||++........... ..|...|++++|+| ++.+|++++.||.|++||++
T Consensus 215 sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 215 SPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp CCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECS-SSCCEEEEESSSSEEEEEEE
T ss_pred CCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcC-CCCEEEEecCCCcEEEEeCC
Confidence 999 899999999999999999876433233333 34889999999999 55679999999999999973
No 37
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.7e-37 Score=296.79 Aligned_cols=259 Identities=21% Similarity=0.368 Sum_probs=214.0
Q ss_pred CccceEEEEEEeccCCCC---CCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEE
Q psy2107 91 SSENVIDVEYLESTPTPS---PLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWL 164 (391)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~---~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~ 164 (391)
+.++.+++|......... ...+.+|...|++++|+ +++|++|+.||+|+|||+ ++.....+.+|...|.+++|
T Consensus 402 s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~- 480 (694)
T 3dm0_A 402 SRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAF- 480 (694)
T ss_dssp ETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE-
T ss_pred eCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEE-
Confidence 468899999875433221 23456899999999998 679999999999999999 56667788899999999999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEE----ecCCCCeEEEEEcCCC--CEEEEEeCCCcEEEEECCCCCC
Q psy2107 165 YNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVC----RGHERGLETVTVSESR--QQFATGGWDCLLKIWSADISKE 238 (391)
Q Consensus 165 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~----~~~~~~v~~l~~~~~~--~~l~sg~~dg~i~iwd~~~~~~ 238 (391)
++++.+|++|+.|++|++||.. . .+...+ .+|...|.+++|+|++ ..|++|+.|+.|++||+++
T Consensus 481 --s~~~~~l~s~s~D~~i~iwd~~--~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~--- 550 (694)
T 3dm0_A 481 --SLDNRQIVSASRDRTIKLWNTL--G---ECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN--- 550 (694)
T ss_dssp --CTTSSCEEEEETTSCEEEECTT--S---CEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT---
T ss_pred --eCCCCEEEEEeCCCEEEEEECC--C---CcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCC---
Confidence 7788999999999999999953 2 122222 4688899999999986 6899999999999999976
Q ss_pred CCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCee
Q psy2107 239 RGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNKS 317 (391)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 317 (391)
......+.+|...|.+++|+|++ .|++++.||.|++||+++++.+..+..+..
T Consensus 551 --------------------------~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~ 604 (694)
T 3dm0_A 551 --------------------------CKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSV 604 (694)
T ss_dssp --------------------------CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSC
T ss_pred --------------------------CcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCc
Confidence 34567788999999999999655 589999999999999999999888888889
Q ss_pred eEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc-------------------cCcEEEEEECCCCCCEEEE
Q psy2107 318 FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH-------------------KEWVQSVRWSPIDPQLFVS 378 (391)
Q Consensus 318 i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h-------------------~~~v~~~~~~~~~~~~l~s 378 (391)
+.+++|+|++.++++++ ++.|++||+++.. ++..+..+ ...+++++|+| ++.+|+|
T Consensus 605 v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sp-dg~~l~s 679 (694)
T 3dm0_A 605 IHALCFSPNRYWLCAAT-EHGIKIWDLESKS---IVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSA-DGSTLFS 679 (694)
T ss_dssp EEEEEECSSSSEEEEEE-TTEEEEEETTTTE---EEEEECCCCC----------------CCCCEEEEEECT-TSSEEEE
T ss_pred EEEEEEcCCCcEEEEEc-CCCEEEEECCCCC---ChhhhccccccccccccccccccCCceeEEeeeEEEcC-CCCEEEE
Confidence 99999999999888776 5669999998755 43333221 12478999999 6678999
Q ss_pred eeCCCcEEEEecC
Q psy2107 379 ASFDNSVKLWDLR 391 (391)
Q Consensus 379 ~~~dg~v~iwdlr 391 (391)
|+.||+|+|||+.
T Consensus 680 gs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 680 GYTDGVIRVWGIG 692 (694)
T ss_dssp EETTSEEEEEEC-
T ss_pred EcCCCeEEEEecc
Confidence 9999999999983
No 38
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.5e-36 Score=284.52 Aligned_cols=268 Identities=27% Similarity=0.448 Sum_probs=227.7
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR 143 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~ 143 (391)
....|.++++.+.+ .+.++.+.+|... ......+.+|...|.+++|+ ++.+++++.||.|++||.
T Consensus 266 ~~v~~~~d~~~l~~----------~~~d~~i~~w~~~---~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~ 332 (577)
T 2ymu_A 266 NGVAFRPDGQTIAS----------ASDDKTVKLWNRN---GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 332 (577)
T ss_dssp EEEEECTTSSEEEE----------EETTSCEEEEETT---SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEEcCCCCEEEE----------EeCCCEEEEEeCC---CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 34577778866654 2356778888632 22234456799999999998 569999999999999999
Q ss_pred CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe
Q psy2107 144 RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG 223 (391)
Q Consensus 144 ~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~ 223 (391)
++..+..+.+|...|.+++| ++++.++++|+.||.|++|+. ....+..+.+|...|.+++|+|++++|++++
T Consensus 333 ~~~~~~~~~~~~~~v~~~~~---s~~g~~l~~~~~dg~v~~~~~-----~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~ 404 (577)
T 2ymu_A 333 NGQHLQTLTGHSSSVWGVAF---SPDGQTIASASDDKTVKLWNR-----NGQLLQTLTGHSSSVRGVAFSPDGQTIASAS 404 (577)
T ss_dssp TSCEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSEEEEEET-----TCCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred CCCeeEEEeCCCCCEEEEEE---CCCCCEEEEEeCCCEEEEEcC-----CCCEEEEecCCCCCeEEEEECCCCCEEEEEe
Confidence 98888899999999999999 778999999999999999993 2356778889999999999999999999999
Q ss_pred CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEe
Q psy2107 224 WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWD 302 (391)
Q Consensus 224 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd 302 (391)
.|+.|++||.. .+.+..+.+|...|.+++|+|++ .+++++.|+.|++||
T Consensus 405 ~d~~v~~~~~~------------------------------~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~ 454 (577)
T 2ymu_A 405 DDKTVKLWNRN------------------------------GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWN 454 (577)
T ss_dssp TTSEEEEECTT------------------------------CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCCEEEEEeCC------------------------------CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 99999999963 23567788999999999999654 589999999999999
Q ss_pred cccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeC
Q psy2107 303 AELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF 381 (391)
Q Consensus 303 ~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 381 (391)
. +++.+..+..+. .+.+++|+|++++|++++.|+.|++||.. ++ +...+.+|...|++++|+| ++++|++++.
T Consensus 455 ~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~---~~~~~~~h~~~v~~l~~s~-dg~~l~s~~~ 528 (577)
T 2ymu_A 455 R-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQ---LLQTLTGHSSSVRGVAFSP-DGQTIASASD 528 (577)
T ss_dssp T-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SC---EEEEEECCSSCEEEEEECT-TSSCEEEEET
T ss_pred C-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CC---EEEEEeCCCCCEEEEEEcC-CCCEEEEEEC
Confidence 6 466677776654 89999999999999999999999999953 33 6778899999999999999 6678999999
Q ss_pred CCcEEEEec
Q psy2107 382 DNSVKLWDL 390 (391)
Q Consensus 382 dg~v~iwdl 390 (391)
||.|++||+
T Consensus 529 dg~v~lwd~ 537 (577)
T 2ymu_A 529 DKTVKLWNR 537 (577)
T ss_dssp TSEEEEECT
T ss_pred cCEEEEEeC
Confidence 999999995
No 39
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-36 Score=271.00 Aligned_cols=240 Identities=20% Similarity=0.431 Sum_probs=197.2
Q ss_pred cCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCC------------------CCeeEEEEEecCCCCe
Q psy2107 113 ILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHG------------------GPVKGVAWLYNDGKDA 171 (391)
Q Consensus 113 ~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~------------------~~v~~l~~~~~~~~~~ 171 (391)
.+|.+.|+|++|+ |++|++|+ ++.+++|++ ++..+..+..|. ..|.+++| ++++.
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---s~dg~ 136 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCF---SPDGK 136 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEE---CTTSS
T ss_pred cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEE---CCCCC
Confidence 3699999999998 66888876 789999998 555555555443 24899999 77899
Q ss_pred EEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcc
Q psy2107 172 AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTT 251 (391)
Q Consensus 172 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 251 (391)
+|++|+.||.|++||+. ..+.+..+.+|...|.+++|+|++++|++|+.|+.|++||+++++
T Consensus 137 ~l~s~~~d~~i~iwd~~----~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~-------------- 198 (393)
T 1erj_A 137 FLATGAEDRLIRIWDIE----NRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ-------------- 198 (393)
T ss_dssp EEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--------------
T ss_pred EEEEEcCCCeEEEEECC----CCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe--------------
Confidence 99999999999999964 346778889999999999999999999999999999999997633
Q ss_pred ccccccccccCCCCCceeeecCccCcccEEEecc-C-CeEEEEECCCeEEEEecccCceeEEEE-------C-CeeeEEE
Q psy2107 252 SKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-V-DEIITSSWDHTLKIWDAELGGMKSEIV-------G-NKSFFDV 321 (391)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~l~s~~~dg~i~iwd~~~~~~~~~~~-------~-~~~i~~~ 321 (391)
....+. +...+.+++|+| + ..+++++.|+.|++||++++..+..+. . ...|.++
T Consensus 199 ---------------~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v 262 (393)
T 1erj_A 199 ---------------CSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSV 262 (393)
T ss_dssp ---------------EEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEE
T ss_pred ---------------eEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEE
Confidence 233333 566789999996 4 469999999999999999998877762 2 3489999
Q ss_pred EECCCCCEEEEeeCCCcEEEEcCCCCCc---------ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 322 HYSPLSKLVITASADKQIRLYDPKVKEG---------AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 322 ~~~p~~~~l~~g~~dg~i~iwd~~~~~~---------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+|+|++++|++|+.|+.|++||++.... ..+...+.+|...|.+++|+| ++.+|++|+.||.|++||++
T Consensus 263 ~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~iwd~~ 340 (393)
T 1erj_A 263 VFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKK 340 (393)
T ss_dssp EECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECG-GGCEEEEEETTSEEEEEETT
T ss_pred EECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECC-CCCEEEEEeCCCeEEEEECC
Confidence 9999999999999999999999875321 124557788999999999999 66789999999999999974
No 40
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.8e-36 Score=260.34 Aligned_cols=275 Identities=20% Similarity=0.342 Sum_probs=227.2
Q ss_pred eeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-C
Q psy2107 68 FDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-R 144 (391)
Q Consensus 68 ~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~ 144 (391)
.+|+.++ +|+. ..++.+++|..........+...+|...|++++|+ +++|++|+.||+|++||+ +
T Consensus 31 l~WS~~~-~lAv-----------g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~ 98 (318)
T 4ggc_A 31 VDWSSGN-VLAV-----------ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ 98 (318)
T ss_dssp EEECTTS-EEEE-----------EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEECCCC-EEEE-----------EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCC
Confidence 5677666 5554 24778999986544333344556799999999998 679999999999999999 5
Q ss_pred CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC
Q psy2107 145 GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW 224 (391)
Q Consensus 145 ~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~ 224 (391)
++.+..+.+|...+.++.+ ++..+++|+.++.+++|+... ....+..+.+|...+.++++++++++|++++.
T Consensus 99 ~~~~~~~~~h~~~~~~~~~-----~~~~l~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 170 (318)
T 4ggc_A 99 QKRLRNMTSHSARVGSLSW-----NSYILSSGSRSGHIHHHDVRV---AEHHVATLSGHSQEVCGLRWAPDGRHLASGGN 170 (318)
T ss_dssp TEEEEEEECCSSCEEEEEE-----ETTEEEEEETTSEEEEEETTS---SSCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred ceeEEEecCccceEEEeec-----CCCEEEEEecCCceEeeecCC---CceeEEEEcCccCceEEEEEcCCCCEEEEEec
Confidence 6677788899999988777 456899999999999998542 33566778899999999999999999999999
Q ss_pred CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC--e--EEEEECCCeEEE
Q psy2107 225 DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD--E--IITSSWDHTLKI 300 (391)
Q Consensus 225 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~--l~s~~~dg~i~i 300 (391)
||.|++||+++++.. .........+...|.++.+.+.+ . +++++.++.|++
T Consensus 171 d~~i~iwd~~~~~~~-------------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l 225 (318)
T 4ggc_A 171 DNLVNVWPSAPGEGG-------------------------WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRI 225 (318)
T ss_dssp TSCEEEEESSCBTTB-------------------------SCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEE
T ss_pred CcceeEEECCCCccc-------------------------ccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEE
Confidence 999999999875532 22445566788899999998543 2 345577899999
Q ss_pred EecccCceeEEEECCeeeEEEEECCCCCEEEEee--CCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEE
Q psy2107 301 WDAELGGMKSEIVGNKSFFDVHYSPLSKLVITAS--ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVS 378 (391)
Q Consensus 301 wd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~--~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 378 (391)
||...............+..+.|+|+++.+++++ .|+.|++||+++++ ++..+.+|.+.|++++|+| ++.+|+|
T Consensus 226 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~---~~~~l~gH~~~V~~l~~sp-dg~~l~S 301 (318)
T 4ggc_A 226 WNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA---KVAELKGHTSRVLSLTMSP-DGATVAS 301 (318)
T ss_dssp EETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC---EEEEECCCSSCEEEEEECT-TSSCEEE
T ss_pred EecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc---EEEEEcCCCCCEEEEEEcC-CCCEEEE
Confidence 9999999988888888999999999999887654 79999999998876 7889999999999999999 6668999
Q ss_pred eeCCCcEEEEecC
Q psy2107 379 ASFDNSVKLWDLR 391 (391)
Q Consensus 379 ~~~dg~v~iwdlr 391 (391)
||.||+|+|||+.
T Consensus 302 ~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 302 AAADETLRLWRCF 314 (318)
T ss_dssp EETTTEEEEECCS
T ss_pred EecCCeEEEEECC
Confidence 9999999999974
No 41
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.1e-36 Score=264.98 Aligned_cols=263 Identities=18% Similarity=0.268 Sum_probs=208.3
Q ss_pred cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCC-----ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEE
Q psy2107 111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRG-----EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAM 183 (391)
Q Consensus 111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~-----~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~ 183 (391)
.+.+|.+.|++++|+ +++|++|+.||.|++||+.. .....+.+|...|.+++|+|. .++.+|++|+.||.|+
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASP-EYGRIIASASYDKTVK 84 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCG-GGCSEEEEEETTSCEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCC-CCCCEEEEEcCCCeEE
Confidence 345799999999998 67999999999999999853 245567899999999999431 1478999999999999
Q ss_pred EEeecCCCC-----ceeEEEEEecCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccc
Q psy2107 184 IWEWKVESN-----SIECIHVCRGHERGLETVTVSES--RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRK 256 (391)
Q Consensus 184 iwd~~~~~~-----~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 256 (391)
+||++.... ....+..+..|...|.+++|+|+ +++|++++.||.|++||+++++.........
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~---------- 154 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTS---------- 154 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEE----------
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccc----------
Confidence 999864322 22667888899999999999999 9999999999999999998765432110000
Q ss_pred cccccCCCCCceeeecCccCcccEEEecc----CCeEEEEECCCeEEEEecccCce--eEEEECC-eeeEEEEECCCC--
Q psy2107 257 KEYSSASSRTPLITLKGHKEAISAVQWTA----VDEIITSSWDHTLKIWDAELGGM--KSEIVGN-KSFFDVHYSPLS-- 327 (391)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~-~~i~~~~~~p~~-- 327 (391)
...........|...+.+++|+| ...+++++.++.+.+|+...+.. ...+..+ ..|.+++|+|++
T Consensus 155 ------~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~ 228 (351)
T 3f3f_A 155 ------EMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGR 228 (351)
T ss_dssp ------EEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSC
T ss_pred ------cccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCC
Confidence 00000111235788899999996 45699999999998888887765 4444444 489999999998
Q ss_pred --CEEEEeeCCCcEEEEcCCCCC-------------------------------------------cceEEEEeccccCc
Q psy2107 328 --KLVITASADKQIRLYDPKVKE-------------------------------------------GAIVKSTFSSHKEW 362 (391)
Q Consensus 328 --~~l~~g~~dg~i~iwd~~~~~-------------------------------------------~~~~~~~~~~h~~~ 362 (391)
++|++|+.||.|++||++... ....+..+.+|...
T Consensus 229 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 308 (351)
T 3f3f_A 229 WYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGE 308 (351)
T ss_dssp SSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSC
T ss_pred cceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEeccccc
Confidence 899999999999999987531 11356678889999
Q ss_pred EEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 363 VQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 363 v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
|++++|+| ++.+|++++.||.|++||+.
T Consensus 309 v~~~~~s~-~~~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 309 VWSVSWNL-TGTILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp EEEEEECS-SSCCEEEEETTSCEEEEEEC
T ss_pred EEEEEEcC-CCCEEEEecCCCcEEEEecC
Confidence 99999999 56789999999999999974
No 42
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4e-37 Score=271.71 Aligned_cols=290 Identities=15% Similarity=0.215 Sum_probs=217.4
Q ss_pred ccceEEEEEEeccCCCCCCc---ccCCCCcEEEEEecC------CEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEE
Q psy2107 92 SENVIDVEYLESTPTPSPLD---CILHDDWVSAIDFHN------DWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGV 161 (391)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~---~~~h~~~V~~~~~~~------~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l 161 (391)
.++.+.+|..........+. ...|...|++++|++ .+|++|+.||.|++||+ +++.+..+.+|...|.++
T Consensus 42 ~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~ 121 (366)
T 3k26_A 42 GSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINEL 121 (366)
T ss_dssp ETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEE
T ss_pred CCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEE
Confidence 34567777765433221111 123778999999973 38999999999999999 567777888999999999
Q ss_pred EEEecCC-CCeEEEEEeCCCcEEEEeecCCCCceeEEEEE---ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy2107 162 AWLYNDG-KDAAFISVSTDQTAMIWEWKVESNSIECIHVC---RGHERGLETVTVSESRQQFATGGWDCLLKIWSADISK 237 (391)
Q Consensus 162 ~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~ 237 (391)
+| ++ ++.+|++|+.||.|++||++ ....+..+ .+|...|.+++|+|++++|++++.||.|++||+++++
T Consensus 122 ~~---~~~~~~~l~s~~~dg~i~iwd~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 122 KF---HPRDPNLLLSVSKDHALRLWNIQ----TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKR 194 (366)
T ss_dssp EE---CSSCTTEEEEEETTSCEEEEETT----TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHH
T ss_pred EE---CCCCCCEEEEEeCCCeEEEEEee----cCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCc
Confidence 99 55 78899999999999999965 33556666 6899999999999999999999999999999998754
Q ss_pred CCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCce---------
Q psy2107 238 ERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGM--------- 308 (391)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--------- 308 (391)
.......... .........................|...|.+++|+ +..+++++.|+.|++||+.++..
T Consensus 195 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~ 272 (366)
T 3k26_A 195 MMNAIKESYD-YNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSE 272 (366)
T ss_dssp HHHHHHHHHT-CCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTC
T ss_pred cccccceeEE-ecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCC
Confidence 3210000000 000000000000001122334455699999999999 67899999999999999987654
Q ss_pred -----eEEEECCe-eeEEEEECCC--CCEEEEeeCCCcEEEEcCCCCCcce-EEEEeccc--cCcEEEEEECCCCCCEEE
Q psy2107 309 -----KSEIVGNK-SFFDVHYSPL--SKLVITASADKQIRLYDPKVKEGAI-VKSTFSSH--KEWVQSVRWSPIDPQLFV 377 (391)
Q Consensus 309 -----~~~~~~~~-~i~~~~~~p~--~~~l~~g~~dg~i~iwd~~~~~~~~-~~~~~~~h--~~~v~~~~~~~~~~~~l~ 377 (391)
+..+..+. .+.+++|+|+ +++|++|+.||.|++||+...+... ....+.+| ...|++++|+| ++.+|+
T Consensus 273 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~ 351 (366)
T 3k26_A 273 SNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSR-DSSILI 351 (366)
T ss_dssp CCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECT-TSSEEE
T ss_pred cchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCC-CCCeEE
Confidence 55665554 7899999999 9999999999999999998765322 44567777 79999999999 677899
Q ss_pred EeeCCCcEEEEecC
Q psy2107 378 SASFDNSVKLWDLR 391 (391)
Q Consensus 378 s~~~dg~v~iwdlr 391 (391)
+++.||.|++||+.
T Consensus 352 s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 352 AVCDDASIWRWDRL 365 (366)
T ss_dssp EEETTSEEEEEEC-
T ss_pred EEeCCCEEEEEEec
Confidence 99999999999984
No 43
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-36 Score=271.24 Aligned_cols=283 Identities=15% Similarity=0.278 Sum_probs=228.2
Q ss_pred ceeeEEeCCe-EehhhHHHHHHHcCCCccceEEEEEE----eccCC------C----CC----CcccCCCCcEEEEEec-
Q psy2107 66 IQFDFLIAGE-LLRTSVTSFLESKGISSENVIDVEYL----ESTPT------P----SP----LDCILHDDWVSAIDFH- 125 (391)
Q Consensus 66 ~~~~f~~~~~-~l~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~------~----~~----~~~~~h~~~V~~~~~~- 125 (391)
...+|.++++ ++++ .+.++.+.+|.. ..... . .+ ....+|.+.|++++|+
T Consensus 49 ~~~~~s~~~~~~l~~----------~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 118 (425)
T 1r5m_A 49 VSSTWNPLDESILAY----------GEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSH 118 (425)
T ss_dssp SEEEECSSCTTEEEE----------EETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECT
T ss_pred EEEEECCCCCcEEEE----------ecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcC
Confidence 5578899998 7765 235678888887 33220 0 00 1112368899999998
Q ss_pred -CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCc-----------
Q psy2107 126 -NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNS----------- 193 (391)
Q Consensus 126 -~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~----------- 193 (391)
+++|++|+.||.|++||.++.....+..|...|.+++| ++++.+|++++.||.|++||+......
T Consensus 119 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 195 (425)
T 1r5m_A 119 DGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKW---NKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGS 195 (425)
T ss_dssp TSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEE---CTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-----
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEE---CCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcc
Confidence 66999999999999999888888999999999999999 778899999999999999996421100
Q ss_pred -----------------------------------------eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy2107 194 -----------------------------------------IECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWS 232 (391)
Q Consensus 194 -----------------------------------------~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd 232 (391)
...+..+..|...|.+++|+|++++|++++.||.|++||
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d 275 (425)
T 1r5m_A 196 SINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWH 275 (425)
T ss_dssp ----------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred ceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 011234456788899999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEE
Q psy2107 233 ADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEI 312 (391)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 312 (391)
+++ ......+..|...|.+++|++++.+++++.|+.|++||+++++.+..+
T Consensus 276 ~~~-----------------------------~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 326 (425)
T 1r5m_A 276 GGN-----------------------------GNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALS 326 (425)
T ss_dssp SSS-----------------------------BSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CCC-----------------------------CccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEec
Confidence 876 345667778999999999998779999999999999999999999888
Q ss_pred ECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC-----------------cceEEEEeccccC--cEEEEEECCCC
Q psy2107 313 VGN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKE-----------------GAIVKSTFSSHKE--WVQSVRWSPID 372 (391)
Q Consensus 313 ~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~-----------------~~~~~~~~~~h~~--~v~~~~~~~~~ 372 (391)
..+ ..+.+++|+|++++|++++.||.|++||++... ...++..+.+|.. .|++++|+| +
T Consensus 327 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~ 405 (425)
T 1r5m_A 327 IVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNC-A 405 (425)
T ss_dssp ECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECT-T
T ss_pred ccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccC-C
Confidence 875 489999999999999999999999999986532 0115677888876 999999999 6
Q ss_pred CCEEEEeeCCCcEEEEecC
Q psy2107 373 PQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 373 ~~~l~s~~~dg~v~iwdlr 391 (391)
+.+|++++.||.|++||++
T Consensus 406 ~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 406 GNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp SSEEEEEESSSCCEEEECC
T ss_pred CceEEEEecCceEEEEeec
Confidence 6689999999999999985
No 44
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.5e-36 Score=270.17 Aligned_cols=261 Identities=20% Similarity=0.334 Sum_probs=218.9
Q ss_pred CccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecC
Q psy2107 91 SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYND 167 (391)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~ 167 (391)
..++.+.+|........ ......|...|++++|+ +++|++|+.||.|++||+ ++..+..+.+|...|.+++|
T Consensus 110 ~~d~~v~lw~~~~~~~~-~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~---- 184 (401)
T 4aez_A 110 ALERNVYVWNADSGSVS-ALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW---- 184 (401)
T ss_dssp EETTEEEEEETTTCCEE-EEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE----
T ss_pred ECCCeEEEeeCCCCcEe-EeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE----
Confidence 35777888876433221 12222389999999998 669999999999999999 56777788899999999999
Q ss_pred CCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCC
Q psy2107 168 GKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGD 247 (391)
Q Consensus 168 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~ 247 (391)
++.++++|+.||.|++||++.. ...+..+.+|...|.+++|+|++++|++|+.||.|++||+++
T Consensus 185 -~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~------------ 248 (401)
T 4aez_A 185 -NRHVLSSGSRSGAIHHHDVRIA---NHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARS------------ 248 (401)
T ss_dssp -ETTEEEEEETTSEEEEEETTSS---SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC------------
T ss_pred -CCCEEEEEcCCCCEEEEecccC---cceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCC------------
Confidence 3458999999999999996532 245677889999999999999999999999999999999976
Q ss_pred CCccccccccccccCCCCCceeeecCccCcccEEEeccCC--eEEEEE--CCCeEEEEecccCceeEEEECCeeeEEEEE
Q psy2107 248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD--EIITSS--WDHTLKIWDAELGGMKSEIVGNKSFFDVHY 323 (391)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~ 323 (391)
..+...+..|...|.+++|+|++ .+++++ .|+.|++||+.+++.+..+..+..+.+++|
T Consensus 249 -----------------~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~ 311 (401)
T 4aez_A 249 -----------------SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIW 311 (401)
T ss_dssp -----------------SSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEE
T ss_pred -----------------CCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEE
Confidence 34567788899999999999743 355554 799999999999999999998889999999
Q ss_pred CCCCCEEEE--eeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 324 SPLSKLVIT--ASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 324 ~p~~~~l~~--g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+|+++++++ |+.||.|++||+.... ......+.+|...|.+++|+| ++.+|++++.||.|++||++
T Consensus 312 s~~~~~l~~~~g~~dg~i~v~~~~~~~-~~~~~~~~~h~~~v~~~~~s~-dg~~l~s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 312 SPHSKEIMSTHGFPDNNLSIWSYSSSG-LTKQVDIPAHDTRVLYSALSP-DGRILSTAASDENLKFWRVY 379 (401)
T ss_dssp CSSSSEEEEEECTTTCEEEEEEEETTE-EEEEEEEECCSSCCCEEEECT-TSSEEEEECTTSEEEEEECC
T ss_pred CCCCCeEEEEeecCCCcEEEEecCCcc-ceeEEEecCCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECC
Confidence 999999999 5589999999987643 223445778999999999999 66789999999999999974
No 45
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=6.7e-36 Score=260.81 Aligned_cols=240 Identities=15% Similarity=0.245 Sum_probs=207.9
Q ss_pred ccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCc----eEEe--ccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEE
Q psy2107 112 CILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGE----HKLN--IPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAM 183 (391)
Q Consensus 112 ~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~----~~~~--~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~ 183 (391)
..+|.+.|++++|+ ++++++++ ||.|++||+... .... ...|...|.+++| ++++.++++++.||.|+
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~~~d~~i~ 122 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKL---LPDGCTLIVGGEASTLS 122 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEE---CTTSSEEEEEESSSEEE
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEE---cCCCCEEEEEcCCCcEE
Confidence 34699999999998 66888888 999999998432 2222 2379999999999 77889999999999999
Q ss_pred EEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107 184 IWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS 263 (391)
Q Consensus 184 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (391)
+||+. .........+..|...|.+++|+|++++|++++.||.|++||+++
T Consensus 123 ~~d~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~---------------------------- 172 (337)
T 1gxr_A 123 IWDLA--APTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN---------------------------- 172 (337)
T ss_dssp EEECC--CC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT----------------------------
T ss_pred EEECC--CCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC----------------------------
Confidence 99965 334446677888999999999999999999999999999999976
Q ss_pred CCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEE
Q psy2107 264 SRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLY 342 (391)
Q Consensus 264 ~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iw 342 (391)
.+....+..|...|.+++|+|++ .+++++.|+.|++||+++++.+..+.....+.+++|+|+++++++++.++.|++|
T Consensus 173 -~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~ 251 (337)
T 1gxr_A 173 -QTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL 251 (337)
T ss_dssp -TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred -CceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEE
Confidence 33566778899999999999655 6999999999999999999999999888899999999999999999999999999
Q ss_pred cCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 343 DPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 343 d~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
|++..+ . ..+..|...|.+++|+| ++.+|++++.||.|++||++
T Consensus 252 ~~~~~~---~-~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~ 295 (337)
T 1gxr_A 252 HVNKPD---K-YQLHLHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTP 295 (337)
T ss_dssp ETTSSC---E-EEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETT
T ss_pred ECCCCC---e-EEEcCCccceeEEEECC-CCCEEEEecCCCcEEEEECC
Confidence 998765 3 35678999999999999 66789999999999999974
No 46
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.7e-36 Score=268.75 Aligned_cols=253 Identities=16% Similarity=0.200 Sum_probs=210.1
Q ss_pred cccCCCCcEEEEEecCCEEEEEECCCeEEEEcCCCc-------eEEeccCCCCCeeEEEEEec-CCCC---eEEEEEeCC
Q psy2107 111 DCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGE-------HKLNIPGHGGPVKGVAWLYN-DGKD---AAFISVSTD 179 (391)
Q Consensus 111 ~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~~~~-------~~~~~~~~~~~v~~l~~~~~-~~~~---~~l~s~~~d 179 (391)
.+.+|.+.|++++|++++|++|+.||.|++||+... ....+.+|...|.+++|+|. ..++ .+|++++.|
T Consensus 11 ~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d 90 (397)
T 1sq9_A 11 AGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFS 90 (397)
T ss_dssp ESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETT
T ss_pred hhhhhhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCC
Confidence 345799999999999999999999999999999543 47788899999999999652 1127 899999999
Q ss_pred CcEEEEeecCCCCce-eEEEEEecC-----CCCeEEEEEc----CCCCE-EEEEeCCCcEEEEECCC------CCCCCCC
Q psy2107 180 QTAMIWEWKVESNSI-ECIHVCRGH-----ERGLETVTVS----ESRQQ-FATGGWDCLLKIWSADI------SKERGDP 242 (391)
Q Consensus 180 g~v~iwd~~~~~~~~-~~~~~~~~~-----~~~v~~l~~~----~~~~~-l~sg~~dg~i~iwd~~~------~~~~~~~ 242 (391)
|.|++|++....... .....+..| ...|.+++|+ |++++ |++|+.||.|++||+++ ++...
T Consensus 91 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-- 168 (397)
T 1sq9_A 91 GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN-- 168 (397)
T ss_dssp SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC--
T ss_pred CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceee--
Confidence 999999986433211 125677778 5899999999 99999 99999999999999976 33211
Q ss_pred CCCCCCCccccccccccccCCCCCceeee-------cCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEEC-
Q psy2107 243 SENGDEGTTSKKRKKEYSSASSRTPLITL-------KGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG- 314 (391)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~- 314 (391)
..+...+ ..|...|.+++|++++.+++++.|+.|++||+++++.+..+..
T Consensus 169 ----------------------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 226 (397)
T 1sq9_A 169 ----------------------WSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQ 226 (397)
T ss_dssp ----------------------CCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECC
T ss_pred ----------------------ccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEecc
Confidence 1122234 4588999999999766888899999999999999999999987
Q ss_pred ------CeeeEEEEECCCCCEEEEeeCC---CcEEEEcCCCCCcceEEEEecc-------------ccCcEEEEEECCCC
Q psy2107 315 ------NKSFFDVHYSPLSKLVITASAD---KQIRLYDPKVKEGAIVKSTFSS-------------HKEWVQSVRWSPID 372 (391)
Q Consensus 315 ------~~~i~~~~~~p~~~~l~~g~~d---g~i~iwd~~~~~~~~~~~~~~~-------------h~~~v~~~~~~~~~ 372 (391)
...+.+++|+|++++|++++.| +.|++||++..+ .+..+.+ |...|.+++|+| +
T Consensus 227 ~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~ 302 (397)
T 1sq9_A 227 HSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE---RIGSLSVPTHSSQASLGEFAHSSWVMSLSFND-S 302 (397)
T ss_dssp C---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC---EEEEECBC--------CCBSBSSCEEEEEECS-S
T ss_pred ccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc---ccceeccCcccccccccccccCCcEEEEEECC-C
Confidence 5689999999999999999999 999999998766 6777887 999999999999 6
Q ss_pred CCEEEEeeCCCcEEEEecC
Q psy2107 373 PQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 373 ~~~l~s~~~dg~v~iwdlr 391 (391)
+.+|++++.||.|++||++
T Consensus 303 ~~~l~~~~~dg~i~iwd~~ 321 (397)
T 1sq9_A 303 GETLCSAGWDGKLRFWDVK 321 (397)
T ss_dssp SSEEEEEETTSEEEEEETT
T ss_pred CCEEEEEeCCCeEEEEEcC
Confidence 6789999999999999984
No 47
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.7e-35 Score=258.21 Aligned_cols=273 Identities=13% Similarity=0.217 Sum_probs=226.0
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCc---ccCCCCcEEEEEec--CCEEEEEECCCeEEE
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLD---CILHDDWVSAIDFH--NDWILTGCYDHSVHI 140 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~h~~~V~~~~~~--~~~l~t~~~dg~i~i 140 (391)
....|.++++++.+ .. ++.+.+|............ ..+|...|++++|+ ++++++++.||.|++
T Consensus 55 ~~~~~~~~~~~l~~----------~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 123 (337)
T 1gxr_A 55 CAVTISNPTRHVYT----------GG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSI 123 (337)
T ss_dssp CEEEECSSSSEEEE----------EC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEE
T ss_pred EEEEEecCCcEEEE----------cC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 45688899988775 23 7889999876543322222 22699999999998 669999999999999
Q ss_pred EcCCCc---eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCC
Q psy2107 141 WTRRGE---HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQ 217 (391)
Q Consensus 141 wd~~~~---~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 217 (391)
||+... ....+..|...|.+++| ++++.++++++.||.|++||++ ....+..+..|...|.+++|+|+++
T Consensus 124 ~d~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~l~~~~~dg~v~~~d~~----~~~~~~~~~~~~~~i~~~~~~~~~~ 196 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTSSAPACYALAI---SPDSKVCFSCCSDGNIAVWDLH----NQTLVRQFQGHTDGASCIDISNDGT 196 (337)
T ss_dssp EECCCC--EEEEEEECSSSCEEEEEE---CTTSSEEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECTTSS
T ss_pred EECCCCCcceeeecccCCCceEEEEE---CCCCCEEEEEeCCCcEEEEeCC----CCceeeeeecccCceEEEEECCCCC
Confidence 999543 45567789999999999 7788999999999999999965 3467778888999999999999999
Q ss_pred EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCC
Q psy2107 218 QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDH 296 (391)
Q Consensus 218 ~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg 296 (391)
+|++++.||.|++||+++++ .+..+ .+...+.+++|+|++ .+++++.|+
T Consensus 197 ~l~~~~~dg~i~~~d~~~~~-----------------------------~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~ 246 (337)
T 1gxr_A 197 KLWTGGLDNTVRSWDLREGR-----------------------------QLQQH-DFTSQIFSLGYCPTGEWLAVGMESS 246 (337)
T ss_dssp EEEEEETTSEEEEEETTTTE-----------------------------EEEEE-ECSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEecCCcEEEEECCCCc-----------------------------eEeee-cCCCceEEEEECCCCCEEEEEcCCC
Confidence 99999999999999997633 33333 467889999999655 588899999
Q ss_pred eEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEE
Q psy2107 297 TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLF 376 (391)
Q Consensus 297 ~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 376 (391)
.|++||+++++......+...+.+++|+|++++|++++.||.|++||+..++ .. ....|...|++++|+| ++.+|
T Consensus 247 ~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~---~~-~~~~~~~~v~~~~~s~-~~~~l 321 (337)
T 1gxr_A 247 NVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA---SI-FQSKESSSVLSCDISV-DDKYI 321 (337)
T ss_dssp CEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---EE-EEEECSSCEEEEEECT-TSCEE
T ss_pred cEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCe---EE-EEecCCCcEEEEEECC-CCCEE
Confidence 9999999988876554555689999999999999999999999999998765 33 3345888999999999 66789
Q ss_pred EEeeCCCcEEEEecC
Q psy2107 377 VSASFDNSVKLWDLR 391 (391)
Q Consensus 377 ~s~~~dg~v~iwdlr 391 (391)
++++.||.|++||+.
T Consensus 322 ~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 322 VTGSGDKKATVYEVI 336 (337)
T ss_dssp EEEETTSCEEEEEEE
T ss_pred EEecCCCeEEEEEEe
Confidence 999999999999973
No 48
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.8e-36 Score=269.48 Aligned_cols=275 Identities=10% Similarity=0.137 Sum_probs=221.3
Q ss_pred ceeeEEeCC-eEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEecC---CEEEEEECCCeEEEE
Q psy2107 66 IQFDFLIAG-ELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHN---DWILTGCYDHSVHIW 141 (391)
Q Consensus 66 ~~~~f~~~~-~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~---~~l~t~~~dg~i~iw 141 (391)
....|.+++ +++++ .+.++.+.+|..............+|...|.+++|++ ++|++++.||.|++|
T Consensus 77 ~~~~~~~~~~~~l~s----------~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw 146 (383)
T 3ei3_B 77 TSLEWHPTHPTTVAV----------GSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLR 146 (383)
T ss_dssp EEEEECSSCTTEEEE----------EEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEE
T ss_pred EEEEECCCCCCEEEE----------EcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEE
Confidence 446788887 66665 2457889999876554443444457999999999985 599999999999999
Q ss_pred cCCCceEEeccCC---CCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCC-
Q psy2107 142 TRRGEHKLNIPGH---GGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQ- 217 (391)
Q Consensus 142 d~~~~~~~~~~~~---~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~- 217 (391)
|+.+.....+..+ ...|.+++| ++++.+|++|+.||.|++||++ ...+..+.+|...|.+++|+|+++
T Consensus 147 d~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~~~d~~i~i~d~~-----~~~~~~~~~h~~~v~~~~~~~~~~~ 218 (383)
T 3ei3_B 147 DFSGSVIQVFAKTDSWDYWYCCVDV---SVSRQMLATGDSTGRLLLLGLD-----GHEIFKEKLHKAKVTHAEFNPRCDW 218 (383)
T ss_dssp ETTSCEEEEEECCCCSSCCEEEEEE---ETTTTEEEEEETTSEEEEEETT-----SCEEEEEECSSSCEEEEEECSSCTT
T ss_pred ECCCCceEEEeccCCCCCCeEEEEE---CCCCCEEEEECCCCCEEEEECC-----CCEEEEeccCCCcEEEEEECCCCCC
Confidence 9987777666544 488999999 5678899999999999999952 346778889999999999999998
Q ss_pred EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CC-eEEEEECC
Q psy2107 218 QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VD-EIITSSWD 295 (391)
Q Consensus 218 ~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~l~s~~~d 295 (391)
+|++|+.|+.|++||+++.+.. ...+..+ +|...|.+++|+| ++ .|++++.|
T Consensus 219 ~l~s~~~d~~i~iwd~~~~~~~-------------------------~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d 272 (383)
T 3ei3_B 219 LMATSSVDATVKLWDLRNIKDK-------------------------NSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQR 272 (383)
T ss_dssp EEEEEETTSEEEEEEGGGCCST-------------------------TCEEEEE-ECSSCEEEEEECTTTSCEEEEEESS
T ss_pred EEEEEeCCCEEEEEeCCCCCcc-------------------------cceEEEe-cCCCceEEEEEcCCCCCEEEEEcCC
Confidence 9999999999999999864321 1233444 6999999999998 65 58999999
Q ss_pred CeEEEEecccCceeEEEECC------------------eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec
Q psy2107 296 HTLKIWDAELGGMKSEIVGN------------------KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS 357 (391)
Q Consensus 296 g~i~iwd~~~~~~~~~~~~~------------------~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~ 357 (391)
+.|++||+++++....+..+ ..+..++|+|++++ +|+.|+.|++||+.+++ .+..+.
T Consensus 273 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~---~~~~l~ 347 (383)
T 3ei3_B 273 NEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGG---LVHQLR 347 (383)
T ss_dssp SEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCC---EEEEEC
T ss_pred CcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCc---eeeeec
Confidence 99999999998877666532 23455777777777 77899999999998876 666776
Q ss_pred c--ccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 358 S--HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 358 ~--h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+ |...+..++|+| ++.+|++|+ ||.|+|||++
T Consensus 348 ~~~~~~~~~~~~~s~-~g~~l~s~s-d~~i~iw~~~ 381 (383)
T 3ei3_B 348 DPNAAGIISLNKFSP-TGDVLASGM-GFNILIWNRE 381 (383)
T ss_dssp BTTBCSCCCEEEECT-TSSEEEEEE-TTEEEEEECC
T ss_pred CCCCCceEEEEEEec-CccEEEEec-CCcEEEEecC
Confidence 6 567788889999 667899997 9999999984
No 49
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.5e-36 Score=263.42 Aligned_cols=270 Identities=17% Similarity=0.233 Sum_probs=223.1
Q ss_pred CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107 110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE 186 (391)
Q Consensus 110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd 186 (391)
..+.+|.+.|++++|+ +++|++|+.||.|++||+ ++..+..+.+|...|.+++| ++++.+|++++.||.|++||
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~---~~~~~~l~s~~~dg~i~iwd 102 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDV---DCFTKYCVTGSADYSIKLWD 102 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEE---CTTSSEEEEEETTTEEEEEE
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEE---cCCCCEEEEEeCCCeEEEEE
Confidence 3456899999999998 679999999999999998 66777888999999999999 77889999999999999999
Q ss_pred ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCCCCCCCCC-----------------
Q psy2107 187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD-----CLLKIWSADISKERGDPSE----------------- 244 (391)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~~~~~----------------- 244 (391)
+. ....+..+. +...|.+++|+|+++++++++.+ |.|++||++..........
T Consensus 103 ~~----~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (369)
T 3zwl_B 103 VS----NGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDA 177 (369)
T ss_dssp TT----TCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCC
T ss_pred CC----CCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccc
Confidence 65 334555555 78899999999999999999999 9999999987654221100
Q ss_pred --------CCCCCc-cccccccccccCCC-CCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEE
Q psy2107 245 --------NGDEGT-TSKKRKKEYSSASS-RTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIV 313 (391)
Q Consensus 245 --------~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~ 313 (391)
.+.... .........++... ......+..|...|.+++|++++ .|++++.|+.|++||+++++.+..+.
T Consensus 178 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 178 ATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec
Confidence 000000 01111122233333 56777888899999999999655 58999999999999999999999999
Q ss_pred CCeeeEEEEECCCCCEEEEeeCCC--------------cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEe
Q psy2107 314 GNKSFFDVHYSPLSKLVITASADK--------------QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSA 379 (391)
Q Consensus 314 ~~~~i~~~~~~p~~~~l~~g~~dg--------------~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 379 (391)
....+.+++|+|+++++++++.++ .+++||....+ ....+.+|...|++++|+| ++.+|+++
T Consensus 258 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~v~~~~~s~-~~~~l~s~ 333 (369)
T 3zwl_B 258 TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE---EIGRVQGHFGPLNTVAISP-QGTSYASG 333 (369)
T ss_dssp CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC---EEEEEECCSSCEEEEEECT-TSSEEEEE
T ss_pred CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc---chhheecccCcEEEEEECC-CCCEEEEE
Confidence 888999999999999999999888 89999998776 7778889999999999999 66789999
Q ss_pred eCCCcEEEEecC
Q psy2107 380 SFDNSVKLWDLR 391 (391)
Q Consensus 380 ~~dg~v~iwdlr 391 (391)
+.||.|++||++
T Consensus 334 ~~dg~v~iw~~~ 345 (369)
T 3zwl_B 334 GEDGFIRLHHFE 345 (369)
T ss_dssp ETTSEEEEEEEC
T ss_pred cCCCeEEEEECc
Confidence 999999999974
No 50
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-35 Score=255.34 Aligned_cols=265 Identities=17% Similarity=0.265 Sum_probs=222.8
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR 143 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~ 143 (391)
....| ++++.+.+ .+.++.+.+|...... .......|...|.+++|+ ++++++++.||.|++|++
T Consensus 22 ~~~~~-~~~~~l~s----------~~~dg~v~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~ 88 (313)
T 3odt_A 22 RDVVA-VDDSKVAS----------VSRDGTVRLWSKDDQW--LGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPL 88 (313)
T ss_dssp EEEEE-EETTEEEE----------EETTSEEEEEEESSSE--EEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred EEEEe-cCCCEEEE----------EEcCCcEEEEECCCCE--EEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEe
Confidence 34567 67755554 2467889999874322 234455699999999998 679999999999999998
Q ss_pred C----CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC-CCCE
Q psy2107 144 R----GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE-SRQQ 218 (391)
Q Consensus 144 ~----~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~ 218 (391)
. ......+.+|...|.+++| ++.++++++.||.|++|| .......+..|...+.+++|+| ++++
T Consensus 89 ~~~~~~~~~~~~~~~~~~i~~~~~-----~~~~l~~~~~d~~i~~~d------~~~~~~~~~~~~~~v~~~~~~~~~~~~ 157 (313)
T 3odt_A 89 FATSGEDPLYTLIGHQGNVCSLSF-----QDGVVISGSWDKTAKVWK------EGSLVYNLQAHNASVWDAKVVSFSENK 157 (313)
T ss_dssp TCCTTSCC-CEECCCSSCEEEEEE-----ETTEEEEEETTSEEEEEE------TTEEEEEEECCSSCEEEEEEEETTTTE
T ss_pred eecCCCCcccchhhcccCEEEEEe-----cCCEEEEEeCCCCEEEEc------CCcEEEecccCCCceeEEEEccCCCCE
Confidence 3 2446677899999999999 356899999999999999 3356778889999999999998 8999
Q ss_pred EEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC-ccCcccEEEeccCCeEEEEECCCe
Q psy2107 219 FATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG-HKEAISAVQWTAVDEIITSSWDHT 297 (391)
Q Consensus 219 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~l~s~~~dg~ 297 (391)
+++++.||.|++||.. .....+.. |...+.+++|++++.+++++.||.
T Consensus 158 l~~~~~d~~i~i~d~~-------------------------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~ 206 (313)
T 3odt_A 158 FLTASADKTIKLWQND-------------------------------KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGL 206 (313)
T ss_dssp EEEEETTSCEEEEETT-------------------------------EEEEEECSSCSSCEEEEEEEETTEEEEEETTSE
T ss_pred EEEEECCCCEEEEecC-------------------------------ceEEEEeccCcccEEEEEEcCCCeEEEccCCCe
Confidence 9999999999999953 24556665 899999999998888999999999
Q ss_pred EEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEE
Q psy2107 298 LKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLF 376 (391)
Q Consensus 298 i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 376 (391)
|++||+++++.+..+..+. .+.+++|+|++ .|++++.||.|++||+++++ ....+..|...|++++|+| ++. +
T Consensus 207 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~---~~~~~~~~~~~i~~~~~~~-~~~-~ 280 (313)
T 3odt_A 207 IKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGS---LKQVITLPAISIWSVDCMS-NGD-I 280 (313)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCC---EEEEEECSSSCEEEEEECT-TSC-E
T ss_pred EEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCc---eeEEEeccCceEEEEEEcc-CCC-E
Confidence 9999999999999998655 89999999999 68899999999999998876 7778888999999999999 445 6
Q ss_pred EEeeCCCcEEEEecC
Q psy2107 377 VSASFDNSVKLWDLR 391 (391)
Q Consensus 377 ~s~~~dg~v~iwdlr 391 (391)
++++.||.|++||++
T Consensus 281 ~~~~~dg~i~iw~~~ 295 (313)
T 3odt_A 281 IVGSSDNLVRIFSQE 295 (313)
T ss_dssp EEEETTSCEEEEESC
T ss_pred EEEeCCCcEEEEeCC
Confidence 779999999999975
No 51
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.4e-37 Score=274.54 Aligned_cols=298 Identities=15% Similarity=0.125 Sum_probs=218.8
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR 143 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~ 143 (391)
...+|.++++++++ .+.++.+.+|............+.+|.+.|++++|+ +++|++++.||+|++||+
T Consensus 15 ~~~~~s~~g~~l~~----------~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 15 YEHAFNSQRTEFVT----------TTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp SCCEECSSSSEEEC----------CCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred EEEEECCCCCEEEE----------ecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 44688999988775 346788999988754223345566899999999998 679999999999999999
Q ss_pred CCc----eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEec-CCCCeEEEEEcCCCCE
Q psy2107 144 RGE----HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRG-HERGLETVTVSESRQQ 218 (391)
Q Consensus 144 ~~~----~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~ 218 (391)
... ....+..|...|.+++| ++++.+|++|+.|+.|++||++... .......+.+ |...|.+++|+|++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~ 160 (377)
T 3dwl_C 85 RPDGTWKQTLVLLRLNRAATFVRW---SPNEDKFAVGSGARVISVCYFEQEN-DWWVSKHLKRPLRSTILSLDWHPNNVL 160 (377)
T ss_dssp ----CCCCEEECCCCSSCEEEEEC---CTTSSCCEEEESSSCEEECCC------CCCCEEECSSCCSCEEEEEECTTSSE
T ss_pred CCCCceeeeeEecccCCceEEEEE---CCCCCEEEEEecCCeEEEEEECCcc-cceeeeEeecccCCCeEEEEEcCCCCE
Confidence 543 46678899999999999 7788899999999999999976322 1223566667 9999999999999999
Q ss_pred EEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCe
Q psy2107 219 FATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHT 297 (391)
Q Consensus 219 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~ 297 (391)
|++|+.||.|++||++............. . .......++..+ +|...|.+++|+|++ .|++++.|+.
T Consensus 161 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~---------~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~ 228 (377)
T 3dwl_C 161 LAAGCADRKAYVLSAYVRDVDAKPEASVW--G---------SRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSS 228 (377)
T ss_dssp EEEEESSSCEEEEEECCSSCC-CCCSCSS--C---------SCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTE
T ss_pred EEEEeCCCEEEEEEEEecccCCCcccccc--c---------cccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCc
Confidence 99999999999999975443221100000 0 000112344555 899999999999765 5999999999
Q ss_pred EEEEecccCce----eEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCc-----------------------
Q psy2107 298 LKIWDAELGGM----KSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEG----------------------- 349 (391)
Q Consensus 298 i~iwd~~~~~~----~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~----------------------- 349 (391)
|++||+.+++. +..+..+. .+.+++|+|++++|++|+.++.+ +|+......
T Consensus 229 i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (377)
T 3dwl_C 229 VTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGE 307 (377)
T ss_dssp EC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCC
T ss_pred EEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccc
Confidence 99999999887 66777665 79999999999999999866655 776542110
Q ss_pred ----ceEE------E----------------EeccccCcEEEEEECCCCCC---EEEEeeCCCcEEEEec
Q psy2107 350 ----AIVK------S----------------TFSSHKEWVQSVRWSPIDPQ---LFVSASFDNSVKLWDL 390 (391)
Q Consensus 350 ----~~~~------~----------------~~~~h~~~v~~~~~~~~~~~---~l~s~~~dg~v~iwdl 390 (391)
.... . ....|...|+++++.+.++. .|+|||.||.|+|||+
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 308 GREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp CCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0000 0 11239999999998764444 6999999999999996
No 52
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-37 Score=281.24 Aligned_cols=266 Identities=10% Similarity=0.073 Sum_probs=203.3
Q ss_pred CCccceEEEEEEeccCCCC--CCcccCCCCcEEEEEecC--------CEEEEEECCCeEEEEcCCCce------------
Q psy2107 90 ISSENVIDVEYLESTPTPS--PLDCILHDDWVSAIDFHN--------DWILTGCYDHSVHIWTRRGEH------------ 147 (391)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~--~~~~~~h~~~V~~~~~~~--------~~l~t~~~dg~i~iwd~~~~~------------ 147 (391)
.+.++.+++|......... ...+.+|.+.|.+++|++ .+||+++.||+|+|||+....
T Consensus 179 ~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p 258 (524)
T 2j04_B 179 EKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKP 258 (524)
T ss_dssp ---CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSC
T ss_pred CCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCc
Confidence 3577899999875432211 122456789999999984 499999999999999994321
Q ss_pred EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEE--EEcCCC-CEEEEEeC
Q psy2107 148 KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETV--TVSESR-QQFATGGW 224 (391)
Q Consensus 148 ~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l--~~~~~~-~~l~sg~~ 224 (391)
...+.+|...|++++| +++ ..|++|+.||+|++||++... .+...+.+|...|.++ +|+|++ .+|++|+.
T Consensus 259 ~~~l~~h~~~v~sv~~---s~~-~~lasgs~DgtV~lWD~~~~~---~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~ 331 (524)
T 2j04_B 259 SLTLSLADSLITTFDF---LSP-TTVVCGFKNGFVAEFDLTDPE---VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV 331 (524)
T ss_dssp SEEECCTTTCEEEEEE---SSS-SEEEEEETTSEEEEEETTBCS---SCSEEEECSSSCEEEEEEECCTTSCCEEEEEET
T ss_pred eEEEEcCCCCEEEEEe---cCC-CeEEEEeCCCEEEEEECCCCC---CceEEeecccccEEEEEEEcCCCCCeEEEEecc
Confidence 2356789999999999 444 479999999999999975321 2345578999999999 578887 89999999
Q ss_pred CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccC--cccEEEeccCC-eEEEEECCCeEEEE
Q psy2107 225 DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKE--AISAVQWTAVD-EIITSSWDHTLKIW 301 (391)
Q Consensus 225 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~-~l~s~~~dg~i~iw 301 (391)
|++|++||+++++ +...+.+|.. .|.+++|+|++ .+++++.|++|++|
T Consensus 332 D~tvklWD~~~~~-----------------------------~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lw 382 (524)
T 2j04_B 332 DGYFYIFNPKDIA-----------------------------TTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAV 382 (524)
T ss_dssp TSEEEEECGGGHH-----------------------------HHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEE
T ss_pred CCeEEEEECCCCC-----------------------------cccccccccccCcccceEeCCCcCeEEEeCCCCcEEEE
Confidence 9999999997633 3334555543 58899999854 68899999999999
Q ss_pred ecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC-------c------------------------
Q psy2107 302 DAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKE-------G------------------------ 349 (391)
Q Consensus 302 d~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~-------~------------------------ 349 (391)
|++++.++.++..|. .|.+++|+|++++|++|+.||+|++||+.... .
T Consensus 383 d~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~ 462 (524)
T 2j04_B 383 PSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDS 462 (524)
T ss_dssp ETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECC
T ss_pred ECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccC
Confidence 999998877776655 89999999999999999999999999853210 0
Q ss_pred ----------ceEEEEeccccCcEEEEEECCCC--CCEEEEeeCCCcEEEEecC
Q psy2107 350 ----------AIVKSTFSSHKEWVQSVRWSPID--PQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 350 ----------~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s~~~dg~v~iwdlr 391 (391)
......+.+|...|++++|+|++ +.++++|+.||.|+||+++
T Consensus 463 ~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~ 516 (524)
T 2j04_B 463 SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLS 516 (524)
T ss_dssp CCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECS
T ss_pred CceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcc
Confidence 11233456788999999999954 4589999999999999985
No 53
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.8e-36 Score=287.44 Aligned_cols=241 Identities=22% Similarity=0.375 Sum_probs=202.6
Q ss_pred ccCCCCcEEEEEec---CCEEEEEECCCeEEEEcCCC------ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcE
Q psy2107 112 CILHDDWVSAIDFH---NDWILTGCYDHSVHIWTRRG------EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTA 182 (391)
Q Consensus 112 ~~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~~~------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v 182 (391)
+.+|.+.|++++|+ +++|++|+.||+|++|++.. .....+.+|...|.+++| ++++.+|++|+.||+|
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~---s~~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVL---SSDGQFALSGSWDGEL 454 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEE---CTTSSEEEEEETTSEE
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEE---CCCCCEEEEEeCCCcE
Confidence 45799999999997 46999999999999999842 234577899999999999 7789999999999999
Q ss_pred EEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107 183 MIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA 262 (391)
Q Consensus 183 ~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (391)
++||+. ....+..+.+|...|.+++|+|++++|++|+.|+.|++||......
T Consensus 455 ~vwd~~----~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~------------------------ 506 (694)
T 3dm0_A 455 RLWDLA----AGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK------------------------ 506 (694)
T ss_dssp EEEETT----TTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE------------------------
T ss_pred EEEECC----CCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc------------------------
Confidence 999964 3466788899999999999999999999999999999999754211
Q ss_pred CCCCceeeecCccCcccEEEeccCC---eEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCc
Q psy2107 263 SSRTPLITLKGHKEAISAVQWTAVD---EIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQ 338 (391)
Q Consensus 263 ~~~~~~~~~~~~~~~v~~~~~~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~ 338 (391)
........+|...|.+++|++++ .+++++.|++|++||+++++....+..|. .|.+++|+|++++|++|+.||.
T Consensus 507 --~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~ 584 (694)
T 3dm0_A 507 --YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV 584 (694)
T ss_dssp --EEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSB
T ss_pred --eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe
Confidence 00111224688999999999754 59999999999999999999988888765 8999999999999999999999
Q ss_pred EEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 339 IRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 339 i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
|++||+++++ .+..+. +...|.+++|+| ++.++++++ |+.|+|||++
T Consensus 585 i~iwd~~~~~---~~~~~~-~~~~v~~~~~sp-~~~~l~~~~-~~~i~iwd~~ 631 (694)
T 3dm0_A 585 VLLWDLAEGK---KLYSLE-ANSVIHALCFSP-NRYWLCAAT-EHGIKIWDLE 631 (694)
T ss_dssp CEEEETTTTE---EEECCB-CSSCEEEEEECS-SSSEEEEEE-TTEEEEEETT
T ss_pred EEEEECCCCc---eEEEec-CCCcEEEEEEcC-CCcEEEEEc-CCCEEEEECC
Confidence 9999998765 555554 456799999999 666666655 6679999974
No 54
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=6.4e-37 Score=276.79 Aligned_cols=243 Identities=18% Similarity=0.262 Sum_probs=189.5
Q ss_pred cCCCCcEEEEEec---CCEEEEEECCCeEEEEcCCC---ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107 113 ILHDDWVSAIDFH---NDWILTGCYDHSVHIWTRRG---EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE 186 (391)
Q Consensus 113 ~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~~~---~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd 186 (391)
.+|...|+||+|+ +++||+|+.||+|+|||+.. .....+.+|.+.|++|+|+|. ++.+|++|+.||+|++||
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~--~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPL--NTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSS--CTTEEEEECSSSCEEEEE
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCC--CCCEEEEEeCCCEEEEee
Confidence 4588999999998 45899999999999999843 344566789999999999543 678999999999999999
Q ss_pred ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107 187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT 266 (391)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (391)
++ ............+...+.+++|+|++++|++|+.||.|++||++. +
T Consensus 194 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~------------------------------~ 241 (435)
T 4e54_B 194 FK--GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG------------------------------K 241 (435)
T ss_dssp TT--SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS------------------------------C
T ss_pred cc--CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc------------------------------c
Confidence 64 332222222233445688999999999999999999999999864 2
Q ss_pred ceeeecCccCcccEEEeccCC--eEEEEECCCeEEEEecccCceeEEE----ECCeeeEEEEECCCCCEEEEeeCCCcEE
Q psy2107 267 PLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKSEI----VGNKSFFDVHYSPLSKLVITASADKQIR 340 (391)
Q Consensus 267 ~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~----~~~~~i~~~~~~p~~~~l~~g~~dg~i~ 340 (391)
.+..+.+|...|.+++|+|.+ .+++++.|+.|++||+++.+....+ .+...|.+++|+|+|++|++|+.||.|+
T Consensus 242 ~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~ 321 (435)
T 4e54_B 242 ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIR 321 (435)
T ss_dssp BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEE
T ss_pred eeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEE
Confidence 345677899999999999654 5788999999999999887644333 2345899999999999999999999999
Q ss_pred EEcCCCCCcc---------------------------------------------------------eEEEE-eccccCc
Q psy2107 341 LYDPKVKEGA---------------------------------------------------------IVKST-FSSHKEW 362 (391)
Q Consensus 341 iwd~~~~~~~---------------------------------------------------------~~~~~-~~~h~~~ 362 (391)
+||++..... .++.. ..+|...
T Consensus 322 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~ 401 (435)
T 4e54_B 322 VYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSG 401 (435)
T ss_dssp EEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCC
T ss_pred EEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCc
Confidence 9998643200 01111 2356677
Q ss_pred EEEE-EECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 363 VQSV-RWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 363 v~~~-~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
|.++ +|+| ++.+|++|+ |+.|+|||++
T Consensus 402 v~s~~~fsp-dg~~lasg~-d~~i~iW~~~ 429 (435)
T 4e54_B 402 ISSLNEFNP-MGDTLASAM-GYHILIWSQQ 429 (435)
T ss_dssp CCCEEEECT-TSSCEEEEC-SSEEEECCCC
T ss_pred EEEEEEECC-CCCEEEEEc-CCcEEEEECC
Confidence 7777 6999 566788776 8899999975
No 55
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2e-35 Score=260.41 Aligned_cols=283 Identities=17% Similarity=0.115 Sum_probs=208.1
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCC--------CCcccCCCCcEEEEEecCCEEEEEE----
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPS--------PLDCILHDDWVSAIDFHNDWILTGC---- 133 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~h~~~V~~~~~~~~~l~t~~---- 133 (391)
...+|++||++|.++-..- .....++.+++|......... ...+.+|.+.|.+++++++.+++|+
T Consensus 18 ~sv~fs~dg~~l~sGGg~~---~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~~ 94 (365)
T 4h5i_A 18 YGAKFLNNDTLLVAGGGGE---GNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNENS 94 (365)
T ss_dssp EEEEEEETTEEEEEEECCS---SSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCCH
T ss_pred EEEEEeCCCcEEEEECCCc---cccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCCc
Confidence 4468999999987532100 000124578898875433221 1235578999999999999888875
Q ss_pred -------CCCeEEEEcCCC--ceEEe--------ccCCCCCeeEEEEEecCCCCeEEEE--EeCCCcEEEEeecCCCCce
Q psy2107 134 -------YDHSVHIWTRRG--EHKLN--------IPGHGGPVKGVAWLYNDGKDAAFIS--VSTDQTAMIWEWKVESNSI 194 (391)
Q Consensus 134 -------~dg~i~iwd~~~--~~~~~--------~~~~~~~v~~l~~~~~~~~~~~l~s--~~~dg~v~iwd~~~~~~~~ 194 (391)
.|+.+++|++.. ..+.. ...+...+.+++| +|+++++++ ++.|++|++||+. ..
T Consensus 95 ~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f---SpDg~~la~as~~~d~~i~iwd~~----~~ 167 (365)
T 4h5i_A 95 TKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYI---SREGTVAAIASSKVPAIMRIIDPS----DL 167 (365)
T ss_dssp HHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEE---CTTSSCEEEEESCSSCEEEEEETT----TT
T ss_pred cEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEE---cCCCCEEEEEECCCCCEEEEeECC----CC
Confidence 467899998732 22211 1234556899999 778887764 4478999999954 34
Q ss_pred eEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc
Q psy2107 195 ECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH 274 (391)
Q Consensus 195 ~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (391)
.++..+. |...|.+++|+|+++++++++.+ .+++|+..++.. ........|
T Consensus 168 ~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~---------------------------~~~~~~~~~ 218 (365)
T 4h5i_A 168 TEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSC---------------------------IARKTDFDK 218 (365)
T ss_dssp EEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCE---------------------------EEEECCCCT
T ss_pred cEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcc---------------------------eeeeecCCC
Confidence 5566665 77889999999999999999865 566777655332 122344578
Q ss_pred cCcccEEEeccCCe-EEEEECCC----eEEEEecccCcee----EEEECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcC
Q psy2107 275 KEAISAVQWTAVDE-IITSSWDH----TLKIWDAELGGMK----SEIVGN-KSFFDVHYSPLSKLVITASADKQIRLYDP 344 (391)
Q Consensus 275 ~~~v~~~~~~~~~~-l~s~~~dg----~i~iwd~~~~~~~----~~~~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~ 344 (391)
...|.+++|+|++. +++++.|+ .+++||+...... ..+..+ .+|++++|+|+|++||+|+.|+.|+|||+
T Consensus 219 ~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~ 298 (365)
T 4h5i_A 219 NWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKL 298 (365)
T ss_dssp TEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred CCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEEC
Confidence 88999999997665 78888777 6889998776532 334444 48999999999999999999999999999
Q ss_pred CCCCcceEEEE-eccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 345 KVKEGAIVKST-FSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 345 ~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
++++ ++.. +.+|...|++++|+| ++.+|+|||.|++|+|||+.
T Consensus 299 ~~~~---~~~~~~~gH~~~V~~v~fSp-dg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 299 KDLS---MSKIFKQAHSFAITEVTISP-DSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp TTTE---EEEEETTSSSSCEEEEEECT-TSCEEEEEETTSEEEEEECC
T ss_pred CCCc---EEEEecCcccCCEEEEEECC-CCCEEEEEeCCCeEEEEEcC
Confidence 8755 5555 579999999999999 67799999999999999983
No 56
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=7.9e-36 Score=262.58 Aligned_cols=285 Identities=14% Similarity=0.230 Sum_probs=221.1
Q ss_pred ceeeEEeCC-eEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEecC-----CEEEEEECCCeEE
Q psy2107 66 IQFDFLIAG-ELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHN-----DWILTGCYDHSVH 139 (391)
Q Consensus 66 ~~~~f~~~~-~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-----~~l~t~~~dg~i~ 139 (391)
....|.+++ .++++... ...++.+.+|....... ......+|...|++++|++ ++|++|+.||.|+
T Consensus 22 ~~~~~~p~~~~l~~~~s~-------~~~d~~v~iw~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~ 93 (357)
T 3i2n_A 22 FDCKWVPCSAKFVTMGNF-------ARGTGVIQLYEIQHGDL-KLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLH 93 (357)
T ss_dssp EEEEECTTSSEEEEEEC---------CCCEEEEEEEECSSSE-EEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEE
T ss_pred EEEEEcCCCceEEEecCc-------cCCCcEEEEEeCCCCcc-cceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEE
Confidence 446788877 45543110 01278899998764322 1233447999999999972 7899999999999
Q ss_pred EEcCC-Cc-eEEeccCCCCCeeEEEEEe---cCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCC----CeEEE
Q psy2107 140 IWTRR-GE-HKLNIPGHGGPVKGVAWLY---NDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHER----GLETV 210 (391)
Q Consensus 140 iwd~~-~~-~~~~~~~~~~~v~~l~~~~---~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~----~v~~l 210 (391)
+||+. +. ....+.+|...|.++.|.+ .++++.+|++++.||.|++||++... ..+..+..|.+ .+.++
T Consensus 94 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~---~~~~~~~~~~~~~~~~v~~~ 170 (357)
T 3i2n_A 94 IWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD---DPVANMEPVQGENKRDCWTV 170 (357)
T ss_dssp EECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS---SCSEEECCCTTSCCCCEEEE
T ss_pred EEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC---CcceeccccCCCCCCceEEE
Confidence 99994 44 6778889999999998865 26788899999999999999976332 13444544443 89999
Q ss_pred E----EcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-
Q psy2107 211 T----VSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA- 285 (391)
Q Consensus 211 ~----~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~- 285 (391)
+ |+|++++|++|+.||.|++||+++++ . .....|...|.+++|+|
T Consensus 171 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-----------------------------~-~~~~~~~~~v~~~~~~~~ 220 (357)
T 3i2n_A 171 AFGNAYNQEERVVCAGYDNGDIKLFDLRNMA-----------------------------L-RWETNIKNGVCSLEFDRK 220 (357)
T ss_dssp EEECCCC-CCCEEEEEETTSEEEEEETTTTE-----------------------------E-EEEEECSSCEEEEEESCS
T ss_pred EEEeccCCCCCEEEEEccCCeEEEEECccCc-----------------------------e-eeecCCCCceEEEEcCCC
Confidence 8 78899999999999999999997632 2 33456888999999996
Q ss_pred ---CCeEEEEECCCeEEEEecccCceeEEEE-----C-CeeeEEEEECCCCC-EEEEeeCCCcEEEEcCCCCCcc-----
Q psy2107 286 ---VDEIITSSWDHTLKIWDAELGGMKSEIV-----G-NKSFFDVHYSPLSK-LVITASADKQIRLYDPKVKEGA----- 350 (391)
Q Consensus 286 ---~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----~-~~~i~~~~~~p~~~-~l~~g~~dg~i~iwd~~~~~~~----- 350 (391)
+..+++++.||.|++||+++++....+. . ...+.+++|+|+++ +|++|+.||.|++||++.....
T Consensus 221 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 300 (357)
T 3i2n_A 221 DISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDS 300 (357)
T ss_dssp SSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCT
T ss_pred CCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccC
Confidence 4569999999999999999877665553 4 44899999999998 8999999999999998764332
Q ss_pred -----------eEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 351 -----------IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 351 -----------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
..+..+.+|...|++++|+|++..++++++.||.|++||+.
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 301 EGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp TSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence 36677889999999999999665544489999999999974
No 57
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-37 Score=280.00 Aligned_cols=229 Identities=13% Similarity=0.068 Sum_probs=181.7
Q ss_pred EEEEECCCeEEEEcCCCce-----EEeccCCCCCeeEEEEEec---CCCCeEEEEEeCCCcEEEEeecCCCCc-------
Q psy2107 129 ILTGCYDHSVHIWTRRGEH-----KLNIPGHGGPVKGVAWLYN---DGKDAAFISVSTDQTAMIWEWKVESNS------- 193 (391)
Q Consensus 129 l~t~~~dg~i~iwd~~~~~-----~~~~~~~~~~v~~l~~~~~---~~~~~~l~s~~~dg~v~iwd~~~~~~~------- 193 (391)
+++++.||+|+||++++.. ...+..|.+.|.+++|+|. ++++.+||+++.||+|++||+......
T Consensus 176 laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~ 255 (524)
T 2j04_B 176 FDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMC 255 (524)
T ss_dssp ------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECC
T ss_pred hccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceee
Confidence 4556688999999984332 1345678899999999663 123679999999999999997533211
Q ss_pred eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC
Q psy2107 194 IECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG 273 (391)
Q Consensus 194 ~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (391)
..+...+.+|...|++++|++++ .|++|+.||.|++||++++. .+...+.+
T Consensus 256 ~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~----------------------------~~~~~~~~ 306 (524)
T 2j04_B 256 EKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPE----------------------------VPSFYDQV 306 (524)
T ss_dssp CSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCS----------------------------SCSEEEEC
T ss_pred cCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCC----------------------------CceEEeec
Confidence 11234678899999999999864 89999999999999997532 24556789
Q ss_pred ccCcccEE--EeccC--CeEEEEECCCeEEEEecccCceeEEEECCe---eeEEEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107 274 HKEAISAV--QWTAV--DEIITSSWDHTLKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVITASADKQIRLYDPKV 346 (391)
Q Consensus 274 ~~~~v~~~--~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~ 346 (391)
|...|.++ .|+++ ..|++++.|++|+|||++++++...+..+. .+.+++|+|+++.+++++.|+.|++||++.
T Consensus 307 H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~ 386 (524)
T 2j04_B 307 HDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRA 386 (524)
T ss_dssp SSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTC
T ss_pred ccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcc
Confidence 99999999 56665 468999999999999999988776665443 478999999999999999999999999987
Q ss_pred CCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 347 KEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 347 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
.. +...+.+|.+.|++++|+| ++.+|+||+.||+|++||+
T Consensus 387 ~~---~~~~l~gH~~~V~sva~Sp-~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 387 AF---AVHPLVSRETTITAIGVSR-LHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp TT---CCEEEEECSSCEEEEECCS-SCCBCEEEETTTEEECCBS
T ss_pred cc---cceeeecCCCceEEEEeCC-CCCeEEEEECCCEEEEEec
Confidence 65 4556778999999999999 5567999999999999996
No 58
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.6e-35 Score=264.68 Aligned_cols=268 Identities=13% Similarity=0.160 Sum_probs=216.9
Q ss_pred CccceEEEEEEeccC----CCCCCcccCCCCcEEEEEec------C---CEEEEEECCCeEEEEcCC-Cce-----EEec
Q psy2107 91 SSENVIDVEYLESTP----TPSPLDCILHDDWVSAIDFH------N---DWILTGCYDHSVHIWTRR-GEH-----KLNI 151 (391)
Q Consensus 91 ~~~~~~~~~~~~~~~----~~~~~~~~~h~~~V~~~~~~------~---~~l~t~~~dg~i~iwd~~-~~~-----~~~~ 151 (391)
+.++.+.+|...... ......+.+|...|++++|+ + ++|++++.||.|++||+. +.. ...+
T Consensus 33 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~ 112 (397)
T 1sq9_A 33 SGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKL 112 (397)
T ss_dssp ETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEE
T ss_pred cCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceee
Confidence 457889999876554 11244556799999999997 4 699999999999999984 333 6777
Q ss_pred cCC-----CCCeeEEEEEecC-CCCeE-EEEEeCCCcEEEEeecC------CCCc-eeEEEEE-------ecCCCCeEEE
Q psy2107 152 PGH-----GGPVKGVAWLYND-GKDAA-FISVSTDQTAMIWEWKV------ESNS-IECIHVC-------RGHERGLETV 210 (391)
Q Consensus 152 ~~~-----~~~v~~l~~~~~~-~~~~~-l~s~~~dg~v~iwd~~~------~~~~-~~~~~~~-------~~~~~~v~~l 210 (391)
..| ...|.+++|++.. +++.+ |++++.||.|++||++. .... ......+ ..|...|.++
T Consensus 113 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 192 (397)
T 1sq9_A 113 DLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSV 192 (397)
T ss_dssp CCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEE
T ss_pred cccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEE
Confidence 888 5999999995211 57888 99999999999999874 2211 1111244 4488999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC---c---cCcccEEEec
Q psy2107 211 TVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG---H---KEAISAVQWT 284 (391)
Q Consensus 211 ~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~v~~~~~~ 284 (391)
+|+|++ +|++|+.||.|++||+++ ..++..+.. | ...|.+++|+
T Consensus 193 ~~~~~~-~l~~~~~dg~i~i~d~~~-----------------------------~~~~~~~~~~~~h~~~~~~i~~i~~~ 242 (397)
T 1sq9_A 193 DISERG-LIATGFNNGTVQISELST-----------------------------LRPLYNFESQHSMINNSNSIRSVKFS 242 (397)
T ss_dssp EECTTS-EEEEECTTSEEEEEETTT-----------------------------TEEEEEEECCC---CCCCCEEEEEEC
T ss_pred EECCCc-eEEEEeCCCcEEEEECCC-----------------------------CceeEEEeccccccccCCccceEEEC
Confidence 999999 999999999999999976 335667777 8 9999999999
Q ss_pred cC-CeEEEEECC---CeEEEEecccCceeEEEEC--------------CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107 285 AV-DEIITSSWD---HTLKIWDAELGGMKSEIVG--------------NKSFFDVHYSPLSKLVITASADKQIRLYDPKV 346 (391)
Q Consensus 285 ~~-~~l~s~~~d---g~i~iwd~~~~~~~~~~~~--------------~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~ 346 (391)
++ ..|++++.| +.|++||+++++.+..+.. ...+.+++|+|++++|++|+.||.|++||++.
T Consensus 243 ~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 243 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 322 (397)
T ss_dssp SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred CCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 65 458899999 9999999999999988875 44899999999999999999999999999987
Q ss_pred CCcceEEEEec------cc---------------cCcEEEEEECCCCC---------CEEEEeeCCCcEEEEecC
Q psy2107 347 KEGAIVKSTFS------SH---------------KEWVQSVRWSPIDP---------QLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 347 ~~~~~~~~~~~------~h---------------~~~v~~~~~~~~~~---------~~l~s~~~dg~v~iwdlr 391 (391)
.+ .+..+. +| ...|++++|+|++. .+|++++.||.|++||++
T Consensus 323 ~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 323 KE---RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp TE---EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred Cc---eeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 65 666777 77 99999999999542 689999999999999973
No 59
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-36 Score=273.78 Aligned_cols=279 Identities=12% Similarity=0.169 Sum_probs=218.2
Q ss_pred ceeeEEe-CCeEehhhHHHHHHHcCCCccceEEEEEEec---cCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEE
Q psy2107 66 IQFDFLI-AGELLRTSVTSFLESKGISSENVIDVEYLES---TPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVH 139 (391)
Q Consensus 66 ~~~~f~~-~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~ 139 (391)
...+|.+ +++++++ .+.++.+++|.... ..........+|...|++++|+ +++|++|+.||+|+
T Consensus 67 ~~~~~s~~~~~~l~s----------~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~ 136 (437)
T 3gre_A 67 TSSAVSPGETPYLIT----------GSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQII 136 (437)
T ss_dssp EEEEEECSSSCEEEE----------EETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEEEECCCCCCEEEE----------ecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEE
Confidence 5568999 8877765 34688999999876 3322233344699999999998 57999999999999
Q ss_pred EEcCC----CceEEec----------cC--CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEec-
Q psy2107 140 IWTRR----GEHKLNI----------PG--HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRG- 202 (391)
Q Consensus 140 iwd~~----~~~~~~~----------~~--~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~- 202 (391)
+||+. +...... .. +...+.++.+.. ++++.++++|+.||.|++||++ ...++..+.+
T Consensus 137 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~d~~i~iwd~~----~~~~~~~~~~~ 211 (437)
T 3gre_A 137 VLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFV-NEEKSLLVALTNLSRVIIFDIR----TLERLQIIENS 211 (437)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEE-CSSCEEEEEEETTSEEEEEETT----TCCEEEEEECC
T ss_pred EEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEE-cCCCCEEEEEeCCCeEEEEeCC----CCeeeEEEccC
Confidence 99982 3222211 12 667788888654 5788999999999999999965 3456777777
Q ss_pred -CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec-CccCcccE
Q psy2107 203 -HERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK-GHKEAISA 280 (391)
Q Consensus 203 -~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~ 280 (391)
|...|++++|+|++++|++|+.||.|++||+++ ..++..+. .|...|.+
T Consensus 212 ~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~-----------------------------~~~~~~~~~~~~~~v~~ 262 (437)
T 3gre_A 212 PRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF-----------------------------NVLIRSWSFGDHAPITH 262 (437)
T ss_dssp GGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT-----------------------------TEEEEEEBCTTCEEEEE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC-----------------------------ccEEEEEecCCCCceEE
Confidence 899999999999999999999999999999976 33555554 67889999
Q ss_pred EEecc----CC-eEEEEECCCeEEEEecccCceeEEEECC---------------------------eeeEEEEECCCCC
Q psy2107 281 VQWTA----VD-EIITSSWDHTLKIWDAELGGMKSEIVGN---------------------------KSFFDVHYSPLSK 328 (391)
Q Consensus 281 ~~~~~----~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~---------------------------~~i~~~~~~p~~~ 328 (391)
++|+| ++ .+++++.||.|++||+++++.+..+..+ ..|.+++|+ +++
T Consensus 263 ~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~ 341 (437)
T 3gre_A 263 VEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK 341 (437)
T ss_dssp EEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE
T ss_pred EEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce
Confidence 97763 34 5889999999999999999988888743 247888999 778
Q ss_pred EEEEeeCCCcEEEEcCCCCCcceEEE----------------------------------EeccccCcEEEEEECCC-CC
Q psy2107 329 LVITASADKQIRLYDPKVKEGAIVKS----------------------------------TFSSHKEWVQSVRWSPI-DP 373 (391)
Q Consensus 329 ~l~~g~~dg~i~iwd~~~~~~~~~~~----------------------------------~~~~h~~~v~~~~~~~~-~~ 373 (391)
+|++|+.|+.|++||+..++...... ....|...|++++|+++ +.
T Consensus 342 ~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~ 421 (437)
T 3gre_A 342 ILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDET 421 (437)
T ss_dssp EEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSS
T ss_pred EEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCc
Confidence 99999999999999998765221111 01228999999999995 36
Q ss_pred CEEEEeeCCCcEEEEe
Q psy2107 374 QLFVSASFDNSVKLWD 389 (391)
Q Consensus 374 ~~l~s~~~dg~v~iwd 389 (391)
.+|+||+.||.|+||+
T Consensus 422 ~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 422 PLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEEEETTSCEEEEC
T ss_pred eEEEEEcCCceEEEeC
Confidence 6999999999999995
No 60
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.8e-35 Score=266.25 Aligned_cols=296 Identities=11% Similarity=0.087 Sum_probs=216.0
Q ss_pred eeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCC
Q psy2107 67 QFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRR 144 (391)
Q Consensus 67 ~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~ 144 (391)
...|.++++.+++ .+.++.+.+|......... ....| ..+....++ +++|++|+.||.|++||+.
T Consensus 61 ~~~~s~~g~~l~~----------~~~d~~v~i~d~~~~~~~~--~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 127 (420)
T 3vl1_A 61 GNTFEKVGSHLYK----------ARLDGHDFLFNTIIRDGSK--MLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSN 127 (420)
T ss_dssp TCEEEEEETTEEE----------EEETTEEEEEECCSEETTT--TSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTT
T ss_pred ceeeeecCCeEEE----------EEcCCcEEEEEecccceee--EEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCC
Confidence 4678998876654 2357788999865443322 22233 444444555 7799999999999999995
Q ss_pred C-ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe
Q psy2107 145 G-EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG 223 (391)
Q Consensus 145 ~-~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~ 223 (391)
. .....+.+|...|.+++| ++++.+|++|+.||.|++||++ ....+..+.+|...|.+++|+|++++|++|+
T Consensus 128 ~~~~~~~~~~h~~~v~~~~~---~~~~~~l~s~s~d~~i~iwd~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 200 (420)
T 3vl1_A 128 FNLQREIDQAHVSEITKLKF---FPSGEALISSSQDMQLKIWSVK----DGSNPRTLIGHRATVTDIAIIDRGRNVLSAS 200 (420)
T ss_dssp SCEEEEETTSSSSCEEEEEE---CTTSSEEEEEETTSEEEEEETT----TCCCCEEEECCSSCEEEEEEETTTTEEEEEE
T ss_pred CcceeeecccccCccEEEEE---CCCCCEEEEEeCCCeEEEEeCC----CCcCceEEcCCCCcEEEEEEcCCCCEEEEEc
Confidence 4 444556799999999999 7788899999999999999965 2345567789999999999999999999999
Q ss_pred CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEe
Q psy2107 224 WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWD 302 (391)
Q Consensus 224 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd 302 (391)
.||.|++||+++++.............. .....+... ........+...+.+++|++++ .+++++.||.|++||
T Consensus 201 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~--v~~~~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d 275 (420)
T 3vl1_A 201 LDGTIRLWECGTGTTIHTFNRKENPHDG--VNSIALFVG---TDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHN 275 (420)
T ss_dssp TTSCEEEEETTTTEEEEEECBTTBTTCC--EEEEEEEEC---CCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEE
T ss_pred CCCcEEEeECCCCceeEEeecCCCCCCC--ccEEEEecC---CcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEE
Confidence 9999999999875532211100000000 000000000 0000112345677788888666 588999999999999
Q ss_pred cccCceeEEEEC--CeeeEEEEECCCCC-EEEEeeCCCcEEEEcCCCCCcceEEEEecc-ccCcEEEEEECCCCCCEEEE
Q psy2107 303 AELGGMKSEIVG--NKSFFDVHYSPLSK-LVITASADKQIRLYDPKVKEGAIVKSTFSS-HKEWVQSVRWSPIDPQLFVS 378 (391)
Q Consensus 303 ~~~~~~~~~~~~--~~~i~~~~~~p~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s 378 (391)
+++++....+.. ...+.+++|+|+++ +|++|+.||.|++||++.... ++..+.+ |...|+++.|.+ +.+|++
T Consensus 276 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~--~~~~~~~~~~~~v~~~~~~~--~~~l~s 351 (420)
T 3vl1_A 276 VFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC--PVGEFLINEGTPINNVYFAA--GALFVS 351 (420)
T ss_dssp TTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS--CSEEEEESTTSCEEEEEEET--TEEEEE
T ss_pred CCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC--chhhhhccCCCCceEEEeCC--CCEEEE
Confidence 999988877754 34899999999999 999999999999999987542 2344444 777888886653 468999
Q ss_pred eeCCCcEEEEecC
Q psy2107 379 ASFDNSVKLWDLR 391 (391)
Q Consensus 379 ~~~dg~v~iwdlr 391 (391)
++.||.|++||++
T Consensus 352 ~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 352 SGFDTSIKLDIIS 364 (420)
T ss_dssp ETTTEEEEEEEEC
T ss_pred ecCCccEEEEecc
Confidence 9999999999974
No 61
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.4e-34 Score=264.00 Aligned_cols=260 Identities=24% Similarity=0.403 Sum_probs=212.8
Q ss_pred cccCCCCc-EEEEEecCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeec
Q psy2107 111 DCILHDDW-VSAIDFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWK 188 (391)
Q Consensus 111 ~~~~h~~~-V~~~~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~ 188 (391)
.+.+|.+. ++|+.++++++++|+.||+|++||+ +++.+..+.+|.+.|.+++| ++++ ++++|+.||+|++||++
T Consensus 116 ~l~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~---~~~~-~l~s~s~dg~i~vwd~~ 191 (464)
T 3v7d_B 116 TLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKY---AHGG-ILVSGSTDRTVRVWDIK 191 (464)
T ss_dssp EEECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE---CSTT-EEEEEETTSCEEEEETT
T ss_pred EEcCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEE---cCCC-EEEEEeCCCCEEEEECC
Confidence 45578877 5899999999999999999999998 66777788999999999999 5555 89999999999999965
Q ss_pred CCCCceeEEEEEecCCCCeEEEEEc--CCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107 189 VESNSIECIHVCRGHERGLETVTVS--ESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT 266 (391)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~v~~l~~~--~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (391)
....+..+.+|...|.+++|+ ++++++++|+.||.|++||+++............. ............
T Consensus 192 ----~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 261 (464)
T 3v7d_B 192 ----KGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY------PLVFHTPEENPY 261 (464)
T ss_dssp ----TTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCS------SEEESCGGGCTT
T ss_pred ----CCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCc------ceEeeccCCCeE
Confidence 346788889999999999998 57789999999999999999876543221111100 000011112223
Q ss_pred ceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCC
Q psy2107 267 PLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPK 345 (391)
Q Consensus 267 ~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~ 345 (391)
....+.+|...+.++... +..+++++.|+.|++||+++++.+..+..+. .+.+++|+|+++++++|+.||.|++||++
T Consensus 262 ~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~ 340 (464)
T 3v7d_B 262 FVGVLRGHMASVRTVSGH-GNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE 340 (464)
T ss_dssp EEEEECCCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred EEEEccCccceEEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 456778899998888543 4689999999999999999999999888665 89999999999999999999999999998
Q ss_pred CCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 346 VKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 346 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+++ ++..+.+|...|.+++|++ .+|++++.||.|++||++
T Consensus 341 ~~~---~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v~vwd~~ 380 (464)
T 3v7d_B 341 NGE---LMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWDAN 380 (464)
T ss_dssp TTE---EEEEECCCSSCEEEEEECS---SEEEEEETTSEEEEEETT
T ss_pred CCc---EEEEEeCCCCcEEEEEEcC---CEEEEEeCCCcEEEEECC
Confidence 766 7788999999999999974 689999999999999984
No 62
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3e-35 Score=265.99 Aligned_cols=269 Identities=20% Similarity=0.359 Sum_probs=222.6
Q ss_pred eeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEecCCEEEEEECCCeEEEEcC-CCc
Q psy2107 68 FDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTR-RGE 146 (391)
Q Consensus 68 ~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~-~~~ 146 (391)
+.+..+++.+.+ .+.++.+.+|...... ....+.+|.+.|++++|+++++++|+.||+|++||+ ++.
T Consensus 137 ~~~~~d~~~l~~----------g~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~ 204 (435)
T 1p22_A 137 YCLQYDDQKIVS----------GLRDNTIKIWDKNTLE--CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGE 204 (435)
T ss_dssp EEEECCSSEEEE----------EESSSCEEEEESSSCC--EEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCC
T ss_pred EEEEECCCEEEE----------EeCCCeEEEEeCCCCe--EEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCc
Confidence 355567766654 2467889999764332 234456799999999999999999999999999999 577
Q ss_pred eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC
Q psy2107 147 HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC 226 (391)
Q Consensus 147 ~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg 226 (391)
.+..+.+|...|.+++| + +..+++|+.||.|++||+.... .......+.+|...|.+++| +++++++|+.||
T Consensus 205 ~~~~~~~h~~~v~~l~~---~--~~~l~s~s~dg~i~vwd~~~~~-~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg 276 (435)
T 1p22_A 205 MLNTLIHHCEAVLHLRF---N--NGMMVTCSKDRSIAVWDMASPT-DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDR 276 (435)
T ss_dssp EEEEECCCCSCEEEEEC---C--TTEEEEEETTSCEEEEECSSSS-CCEEEEEECCCSSCEEEEEE--ETTEEEEEETTS
T ss_pred EEEEEcCCCCcEEEEEE---c--CCEEEEeeCCCcEEEEeCCCCC-CceeeeEecCCCCcEEEEEe--CCCEEEEEeCCC
Confidence 77888999999999999 3 4589999999999999976332 23444677899999999999 678999999999
Q ss_pred cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccC
Q psy2107 227 LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELG 306 (391)
Q Consensus 227 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 306 (391)
.|++||+++ ...+..+.+|...|.++.++ +..+++|+.||.|++||++++
T Consensus 277 ~i~vwd~~~-----------------------------~~~~~~~~~~~~~v~~~~~~-~~~l~~g~~dg~i~iwd~~~~ 326 (435)
T 1p22_A 277 TIKVWNTST-----------------------------CEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECG 326 (435)
T ss_dssp EEEEEETTT-----------------------------CCEEEEEECCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTC
T ss_pred eEEEEECCc-----------------------------CcEEEEEcCCCCcEEEEEeC-CCEEEEEeCCCeEEEEECCCC
Confidence 999999976 34677888999999999995 578999999999999999999
Q ss_pred ceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCc------ceEEEEeccccCcEEEEEECCCCCCEEEEe
Q psy2107 307 GMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEG------AIVKSTFSSHKEWVQSVRWSPIDPQLFVSA 379 (391)
Q Consensus 307 ~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 379 (391)
+.+..+..+. .+.+++| ++.+|++|+.||.|++||++.... ......+.+|.+.|++++|+ +.+|+++
T Consensus 327 ~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~ 401 (435)
T 1p22_A 327 ACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD---EFQIVSS 401 (435)
T ss_dssp CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC---SSCEEEC
T ss_pred CEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeC---CCEEEEE
Confidence 9999998665 7899998 689999999999999999864321 12567788999999999993 3569999
Q ss_pred eCCCcEEEEecC
Q psy2107 380 SFDNSVKLWDLR 391 (391)
Q Consensus 380 ~~dg~v~iwdlr 391 (391)
+.||.|++||+.
T Consensus 402 s~Dg~i~iwd~~ 413 (435)
T 1p22_A 402 SHDDTILIWDFL 413 (435)
T ss_dssp CSSSEEEEEC--
T ss_pred eCCCEEEEEECC
Confidence 999999999973
No 63
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.2e-35 Score=265.22 Aligned_cols=252 Identities=20% Similarity=0.357 Sum_probs=209.7
Q ss_pred cccCCCCcEEEEEecC---CEEEEEECCCeEEEEcCC-----------CceEEeccCCCCCeeEEEEEecCCCCe-EEEE
Q psy2107 111 DCILHDDWVSAIDFHN---DWILTGCYDHSVHIWTRR-----------GEHKLNIPGHGGPVKGVAWLYNDGKDA-AFIS 175 (391)
Q Consensus 111 ~~~~h~~~V~~~~~~~---~~l~t~~~dg~i~iwd~~-----------~~~~~~~~~~~~~v~~l~~~~~~~~~~-~l~s 175 (391)
....|.+.|++++|++ .+|++++.||.|++|++. ......+.+|...|.+++| ++++. +|++
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~---~~~~~~~l~s 199 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSW---NPNLNGYLLS 199 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEE---CTTSTTEEEE
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEe---CCCCCCeEEE
Confidence 4457999999999984 489999999999999984 3566678899999999999 66666 9999
Q ss_pred EeCCCcEEEEeecCCCCc---eeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcc
Q psy2107 176 VSTDQTAMIWEWKVESNS---IECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTT 251 (391)
Q Consensus 176 ~~~dg~v~iwd~~~~~~~---~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 251 (391)
|+.||.|++|++...... ......+.+|...|.+++|+| ++.+|++++.||.|++||+++...
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~------------- 266 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT------------- 266 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS-------------
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC-------------
Confidence 999999999997642221 122456778999999999999 778999999999999999986431
Q ss_pred ccccccccccCCCCCceeeecCccCcccEEEeccCC--eEEEEECCCeEEEEeccc-CceeEEEECC-eeeEEEEECCCC
Q psy2107 252 SKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAEL-GGMKSEIVGN-KSFFDVHYSPLS 327 (391)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~-~~~~~~~~~~-~~i~~~~~~p~~ 327 (391)
..++..+..|...|.+++|+|.+ .+++|+.||.|++||+++ ...+..+..+ ..|.+++|+|++
T Consensus 267 -------------~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~ 333 (430)
T 2xyi_A 267 -------------SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN 333 (430)
T ss_dssp -------------SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSC
T ss_pred -------------CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCC
Confidence 23566777899999999999755 488999999999999998 5667777755 489999999998
Q ss_pred C-EEEEeeCCCcEEEEcCCCCCc-----------ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 328 K-LVITASADKQIRLYDPKVKEG-----------AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 328 ~-~l~~g~~dg~i~iwd~~~~~~-----------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+ +|++++.|+.|++||+..... ..++..+.+|...|++++|+|++..+|++++.||.|+||++.
T Consensus 334 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 334 ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp TTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 5 699999999999999876221 136778889999999999999665599999999999999974
No 64
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.4e-35 Score=259.36 Aligned_cols=243 Identities=19% Similarity=0.264 Sum_probs=204.2
Q ss_pred CCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCc---eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeec
Q psy2107 114 LHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGE---HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWK 188 (391)
Q Consensus 114 ~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~ 188 (391)
.|.++|++++|+ +++|++|+.||.|++||+... ....+.+|...|.+++| ++++.+|++++.||.|++||+.
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~---~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDW---APDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEE---ETTTTEEEEEETTSCEEEEEEE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEE---eCCCCEEEEEcCCCeEEEEECC
Confidence 488999999998 669999999999999999554 67788899999999999 5578899999999999999975
Q ss_pred CCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCce
Q psy2107 189 VESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPL 268 (391)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (391)
.........+..|...|.+++|+|++++|++|+.||.|++||++..... ....
T Consensus 83 --~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~-------------------------~~~~ 135 (372)
T 1k8k_C 83 --GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDW-------------------------WVCK 135 (372)
T ss_dssp --TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTE-------------------------EEEE
T ss_pred --CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcc-------------------------eeee
Confidence 3333445555779999999999999999999999999999999763310 0012
Q ss_pred eeecCccCcccEEEeccCC-eEEEEECCCeEEEEecc------------------cCceeEEEECCe-eeEEEEECCCCC
Q psy2107 269 ITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAE------------------LGGMKSEIVGNK-SFFDVHYSPLSK 328 (391)
Q Consensus 269 ~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~------------------~~~~~~~~~~~~-~i~~~~~~p~~~ 328 (391)
.....|...|.+++|++++ .+++++.|+.|++||++ .++.+..+..+. .+.+++|+|+++
T Consensus 136 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 215 (372)
T 1k8k_C 136 HIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS 215 (372)
T ss_dssp EECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS
T ss_pred eeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC
Confidence 2335788999999999655 68999999999999953 567777776554 899999999999
Q ss_pred EEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 329 LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 329 ~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+|++++.|+.|++||++..+ .+..+..|...|++++|+| ++.+++++ .||.|++||++
T Consensus 216 ~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~~~v~~~~~~~-~~~~l~~~-~d~~i~i~~~~ 273 (372)
T 1k8k_C 216 RVAWVSHDSTVCLADADKKM---AVATLASETLPLLAVTFIT-ESSLVAAG-HDCFPVLFTYD 273 (372)
T ss_dssp EEEEEETTTEEEEEEGGGTT---EEEEEECSSCCEEEEEEEE-TTEEEEEE-TTSSCEEEEEE
T ss_pred EEEEEeCCCEEEEEECCCCc---eeEEEccCCCCeEEEEEec-CCCEEEEE-eCCeEEEEEcc
Confidence 99999999999999998766 7778889999999999999 56667666 89999999973
No 65
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.1e-34 Score=257.96 Aligned_cols=240 Identities=20% Similarity=0.253 Sum_probs=192.7
Q ss_pred ccCCCCcEEEEEec--C-CEEEEEECCCeEEEEcCC-CceEEec--cCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107 112 CILHDDWVSAIDFH--N-DWILTGCYDHSVHIWTRR-GEHKLNI--PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW 185 (391)
Q Consensus 112 ~~~h~~~V~~~~~~--~-~~l~t~~~dg~i~iwd~~-~~~~~~~--~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw 185 (391)
+.+|.+.|++++|+ + ++|++|+.||.|+|||+. +.....+ .+|...|.+++|+|. ++.+|++++.||.|++|
T Consensus 69 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~~~d~~i~iw 146 (383)
T 3ei3_B 69 ASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQF--NTNQLFVSSIRGATTLR 146 (383)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETT--EEEEEEEEETTTEEEEE
T ss_pred ccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCC--CCCEEEEEeCCCEEEEE
Confidence 35799999999998 4 699999999999999994 3333333 479999999999542 67899999999999999
Q ss_pred eecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCC
Q psy2107 186 EWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSR 265 (391)
Q Consensus 186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (391)
|++ ............|...|.+++|+|++++|++|+.||.|++||++ .
T Consensus 147 d~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~------------------------------~ 194 (383)
T 3ei3_B 147 DFS--GSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD------------------------------G 194 (383)
T ss_dssp ETT--SCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT------------------------------S
T ss_pred ECC--CCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC------------------------------C
Confidence 965 32222222223445889999999999999999999999999984 2
Q ss_pred CceeeecCccCcccEEEeccCC--eEEEEECCCeEEEEeccc----CceeEEEECCeeeEEEEECC-CCCEEEEeeCCCc
Q psy2107 266 TPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAEL----GGMKSEIVGNKSFFDVHYSP-LSKLVITASADKQ 338 (391)
Q Consensus 266 ~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~----~~~~~~~~~~~~i~~~~~~p-~~~~l~~g~~dg~ 338 (391)
.++..+.+|...|.+++|+|++ .+++++.|+.|++||+++ +..+..+.+...+.+++|+| ++++|++++.|+.
T Consensus 195 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~ 274 (383)
T 3ei3_B 195 HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNE 274 (383)
T ss_dssp CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSE
T ss_pred CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCc
Confidence 3567788999999999999765 699999999999999998 66777777777999999999 9999999999999
Q ss_pred EEEEcCCCCCcceEEEEeccc-------c----------CcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 339 IRLYDPKVKEGAIVKSTFSSH-------K----------EWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 339 i~iwd~~~~~~~~~~~~~~~h-------~----------~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
|++||+++.... ..+.+| . ..+..++|+|++ .+ +++.||.|++||++
T Consensus 275 i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg-~~--s~s~d~~i~iwd~~ 338 (383)
T 3ei3_B 275 IRVYSSYDWSKP---DQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDD-QL--LLNDKRTIDIYDAN 338 (383)
T ss_dssp EEEEETTBTTSC---SEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCT-TT--CTTCCCCEEEEETT
T ss_pred EEEEECCCCccc---cccccccccccccccceEEeccCCCCceEEEecCCc-cc--ccCCCCeEEEEecC
Confidence 999999876532 222222 2 344556777733 33 78899999999974
No 66
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.2e-34 Score=259.32 Aligned_cols=263 Identities=22% Similarity=0.460 Sum_probs=221.7
Q ss_pred eeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEecCCEEEEEECCCeEEEEcC-CCc
Q psy2107 68 FDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTR-RGE 146 (391)
Q Consensus 68 ~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~-~~~ 146 (391)
..+.++|+.+.+ .+.++.+.+|...... ....+.+|.+.|.+++|+++++++|+.||+|++||+ ++.
T Consensus 123 ~~~~~~g~~l~s----------g~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 190 (445)
T 2ovr_B 123 TCLQFCGNRIVS----------GSDDNTLKVWSAVTGK--CLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGE 190 (445)
T ss_dssp EEEEEETTEEEE----------EETTSCEEEEETTTCC--EEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTE
T ss_pred EEEEEcCCEEEE----------EECCCcEEEEECCCCc--EEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCc
Confidence 356666766654 2467889999864332 234456899999999999999999999999999999 566
Q ss_pred eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC
Q psy2107 147 HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC 226 (391)
Q Consensus 147 ~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg 226 (391)
....+.+|...|.++.| ++..+++|+.||.|++||+. ....+..+.+|...|.+++| +++++++|+.||
T Consensus 191 ~~~~~~~h~~~v~~~~~-----~~~~l~s~s~dg~i~~wd~~----~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg 259 (445)
T 2ovr_B 191 CIHTLYGHTSTVRCMHL-----HEKRVVSGSRDATLRVWDIE----TGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDF 259 (445)
T ss_dssp EEEEECCCSSCEEEEEE-----ETTEEEEEETTSEEEEEESS----SCCEEEEEECCSSCEEEEEE--CSSCEEEEETTS
T ss_pred EEEEECCCCCcEEEEEe-----cCCEEEEEeCCCEEEEEECC----CCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCC
Confidence 77788899999999999 34579999999999999965 34567788899999999999 678899999999
Q ss_pred cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccC
Q psy2107 227 LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELG 306 (391)
Q Consensus 227 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 306 (391)
.|++||+++ ..++..+.+|...|.++.| ++..+++++.|+.|++||++++
T Consensus 260 ~i~iwd~~~-----------------------------~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~~~~ 309 (445)
T 2ovr_B 260 MVKVWDPET-----------------------------ETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETG 309 (445)
T ss_dssp CEEEEEGGG-----------------------------TEEEEEECCCSSCEEEEEE-CSSEEEEEETTSCEEEEETTTC
T ss_pred EEEEEECCC-----------------------------CcEeEEecCCCCceEEEEE-CCCEEEEEeCCCeEEEEECCCC
Confidence 999999976 3467778899999999999 5678999999999999999999
Q ss_pred ceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecc---ccCcEEEEEECCCCCCEEEEeeCC
Q psy2107 307 GMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS---HKEWVQSVRWSPIDPQLFVSASFD 382 (391)
Q Consensus 307 ~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~l~s~~~d 382 (391)
+.+..+..+. .+.++.+ +++++++|+.||.|++||+++++ ....+.+ |...|++++|++ .++++|+.|
T Consensus 310 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~---~~~~~~~~~~~~~~v~~~~~~~---~~l~s~~~d 381 (445)
T 2ovr_B 310 NCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQ---CLQTLQGPNKHQSAVTCLQFNK---NFVITSSDD 381 (445)
T ss_dssp CEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCC---EEEEECSTTSCSSCEEEEEECS---SEEEEEETT
T ss_pred CEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCc---EEEEEccCCCCCCCEEEEEECC---CEEEEEeCC
Confidence 9998887765 6666766 47899999999999999998766 5666665 889999999964 689999999
Q ss_pred CcEEEEecC
Q psy2107 383 NSVKLWDLR 391 (391)
Q Consensus 383 g~v~iwdlr 391 (391)
|.|++||++
T Consensus 382 g~v~iwd~~ 390 (445)
T 2ovr_B 382 GTVKLWDLK 390 (445)
T ss_dssp SEEEEEETT
T ss_pred CeEEEEECC
Confidence 999999974
No 67
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-34 Score=260.07 Aligned_cols=268 Identities=16% Similarity=0.217 Sum_probs=214.1
Q ss_pred cccCCCCcEEEEEec--CC-EEEEEECCCeEEEEcC----CCce-------EEeccC----------CCCCeeEEEEEec
Q psy2107 111 DCILHDDWVSAIDFH--ND-WILTGCYDHSVHIWTR----RGEH-------KLNIPG----------HGGPVKGVAWLYN 166 (391)
Q Consensus 111 ~~~~h~~~V~~~~~~--~~-~l~t~~~dg~i~iwd~----~~~~-------~~~~~~----------~~~~v~~l~~~~~ 166 (391)
....|.+.|++++|+ ++ +|++|+.||.|++|++ .... ...+.. |.+.|.+++|
T Consensus 40 ~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--- 116 (425)
T 1r5m_A 40 KEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAW--- 116 (425)
T ss_dssp EEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEE---
T ss_pred eeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEE---
Confidence 334577899999998 56 9999999999999999 5443 333333 6789999999
Q ss_pred CCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCC
Q psy2107 167 DGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENG 246 (391)
Q Consensus 167 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~ 246 (391)
++++.+|++|+.||.|++||. ....+..+.+|...|.+++|+|++++|++++.||.|++||+++++.........
T Consensus 117 s~~~~~l~~~~~dg~i~i~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 191 (425)
T 1r5m_A 117 SHDGNSIVTGVENGELRLWNK-----TGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKE 191 (425)
T ss_dssp CTTSSEEEEEETTSCEEEEET-----TSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-
T ss_pred cCCCCEEEEEeCCCeEEEEeC-----CCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccc
Confidence 778999999999999999992 335677888999999999999999999999999999999998766433221111
Q ss_pred CC---------------------------CccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeE
Q psy2107 247 DE---------------------------GTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTL 298 (391)
Q Consensus 247 ~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i 298 (391)
.. ...........++......+..+..|...|.+++|++++ .+++++.|+.|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i 271 (425)
T 1r5m_A 192 TGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTL 271 (425)
T ss_dssp --------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred cCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEE
Confidence 10 001111122233445556777888999999999999655 69999999999
Q ss_pred EEEecccCceeEEEECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEE
Q psy2107 299 KIWDAELGGMKSEIVGN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFV 377 (391)
Q Consensus 299 ~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 377 (391)
++||+++++....+..+ ..+.+++|+|++ ++++++.|+.|++||++..+ ....+..|...|.+++|+| ++.+|+
T Consensus 272 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~~~i~~~~~s~-~~~~l~ 346 (425)
T 1r5m_A 272 RIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNT---LLALSIVDGVPIFAGRISQ-DGQKYA 346 (425)
T ss_dssp EEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTE---EEEEEECTTCCEEEEEECT-TSSEEE
T ss_pred EEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCc---EeEecccCCccEEEEEEcC-CCCEEE
Confidence 99999999988888755 489999999999 99999999999999998765 6777888999999999999 667899
Q ss_pred EeeCCCcEEEEecC
Q psy2107 378 SASFDNSVKLWDLR 391 (391)
Q Consensus 378 s~~~dg~v~iwdlr 391 (391)
+++.||.|++||++
T Consensus 347 ~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 347 VAFMDGQVNVYDLK 360 (425)
T ss_dssp EEETTSCEEEEECH
T ss_pred EEECCCeEEEEECC
Confidence 99999999999973
No 68
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-35 Score=281.97 Aligned_cols=250 Identities=18% Similarity=0.296 Sum_probs=206.3
Q ss_pred cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCC---CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107 111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRR---GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW 185 (391)
Q Consensus 111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~---~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw 185 (391)
.+.+|.+.|++++|+ ++++++|+.||.|+|||+. ......+.+|.++|++++|+|. .++.+|++|+.||.|++|
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~-~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP-KFGTILASCSYDGKVLIW 82 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCT-TSCSEEEEEETTSCEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCC-CCCCEEEEEeCCCeEEEE
Confidence 356899999999998 6799999999999999984 3455678899999999999431 238899999999999999
Q ss_pred eecCCCCceeEEEEEecCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107 186 EWKVESNSIECIHVCRGHERGLETVTVSES--RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS 263 (391)
Q Consensus 186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (391)
|+. ......+..+.+|...|.+++|+|+ ++++++|+.||.|++||++++..
T Consensus 83 d~~--~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~------------------------- 135 (753)
T 3jro_A 83 KEE--NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT------------------------- 135 (753)
T ss_dssp EEE--TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC-------------------------
T ss_pred ECC--CCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC-------------------------
Confidence 976 3444577888899999999999999 99999999999999999987432
Q ss_pred CCCceeeecCccCcccEEEecc--------------CCeEEEEECCCeEEEEecccCc----eeEEEECC-eeeEEEEEC
Q psy2107 264 SRTPLITLKGHKEAISAVQWTA--------------VDEIITSSWDHTLKIWDAELGG----MKSEIVGN-KSFFDVHYS 324 (391)
Q Consensus 264 ~~~~~~~~~~~~~~v~~~~~~~--------------~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~-~~i~~~~~~ 324 (391)
.....+.+|...|.+++|+| +..+++|+.||.|++||++++. ....+..| .+|.+++|+
T Consensus 136 --~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~s 213 (753)
T 3jro_A 136 --TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS 213 (753)
T ss_dssp --CCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC
T ss_pred --cceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEec
Confidence 23456678999999999997 4569999999999999998873 44555554 489999999
Q ss_pred CC---CCEEEEeeCCCcEEEEcCCCCCcce--EEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 325 PL---SKLVITASADKQIRLYDPKVKEGAI--VKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 325 p~---~~~l~~g~~dg~i~iwd~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
|+ +++|++|+.||.|++||++...... .......|...|++++|+| ++.++++++.||.|++||++
T Consensus 214 p~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 214 PTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp CCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECT-TTCCEEEECSSSCEECCBCC
T ss_pred cCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcC-CCCEEEEEcCCCEEEEEecC
Confidence 99 8999999999999999998753221 2223446889999999999 56679999999999999974
No 69
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-36 Score=270.92 Aligned_cols=280 Identities=18% Similarity=0.273 Sum_probs=224.2
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccC--CCCCCcccCCCCcEEEEEec---CCEEEEEECCCeEEE
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTP--TPSPLDCILHDDWVSAIDFH---NDWILTGCYDHSVHI 140 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~h~~~V~~~~~~---~~~l~t~~~dg~i~i 140 (391)
....|.++++++++ .+.++.+.+|...... ......+.+|...|++++|+ +++|++++.||.|++
T Consensus 71 ~~~~~s~~~~~l~~----------~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~i 140 (416)
T 2pm9_A 71 NDLDWSHNNKIIAG----------ALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFI 140 (416)
T ss_dssp EEEEECSSSSCEEE----------EESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEB
T ss_pred EEEEECCCCCeEEE----------EccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEE
Confidence 45688889877765 2346788998776522 12344566799999999998 569999999999999
Q ss_pred EcCCCce-------EE---eccCCCCCeeEEEEEecCCC-CeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC------
Q psy2107 141 WTRRGEH-------KL---NIPGHGGPVKGVAWLYNDGK-DAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH------ 203 (391)
Q Consensus 141 wd~~~~~-------~~---~~~~~~~~v~~l~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~------ 203 (391)
||+.... .. ....|...|.+++| +++ +.++++++.||.|++||++ ....+..+..|
T Consensus 141 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~l~~~~~dg~v~iwd~~----~~~~~~~~~~~~~~~~~ 213 (416)
T 2pm9_A 141 WDMNKCTESPSNYTPLTPGQSMSSVDEVISLAW---NQSLAHVFASAGSSNFASIWDLK----AKKEVIHLSYTSPNSGI 213 (416)
T ss_dssp CBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEE---CSSCTTEEEEESSSSCEEEEETT----TTEEEEEECCCCCSSCC
T ss_pred EECCCCccccccccccccccccCCCCCeeEEEe---CCCCCcEEEEEcCCCCEEEEECC----CCCcceEEecccccccc
Confidence 9994432 22 34679999999999 556 6799999999999999965 33556666665
Q ss_pred CCCeEEEEEcCCC-CEEEEEeCCC---cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec-CccCcc
Q psy2107 204 ERGLETVTVSESR-QQFATGGWDC---LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK-GHKEAI 278 (391)
Q Consensus 204 ~~~v~~l~~~~~~-~~l~sg~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v 278 (391)
...|.+++|+|++ .++++++.|+ .|++||++++. .+...+. +|...|
T Consensus 214 ~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~----------------------------~~~~~~~~~~~~~v 265 (416)
T 2pm9_A 214 KQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN----------------------------TPLQTLNQGHQKGI 265 (416)
T ss_dssp CCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT----------------------------SCSBCCCSCCSSCE
T ss_pred CCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC----------------------------CCcEEeecCccCce
Confidence 7899999999997 6899999998 99999997632 2455566 899999
Q ss_pred cEEEecc-C-CeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCC-CEEEEeeCCCcEEEEcCCCCCcceEE-
Q psy2107 279 SAVQWTA-V-DEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLS-KLVITASADKQIRLYDPKVKEGAIVK- 353 (391)
Q Consensus 279 ~~~~~~~-~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~-~~l~~g~~dg~i~iwd~~~~~~~~~~- 353 (391)
.+++|+| + ..|++++.|+.|++||+++++.+..+..+. .+.+++|+|++ .+|++++.|+.|++||+.........
T Consensus 266 ~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~ 345 (416)
T 2pm9_A 266 LSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQ 345 (416)
T ss_dssp EEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-
T ss_pred eEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccc
Confidence 9999996 4 459999999999999999999999988765 89999999998 89999999999999999765421110
Q ss_pred -------------------------------EEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 354 -------------------------------STFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 354 -------------------------------~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
.....|..++++++|+| ++++|++++.||.|+|||+.
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~la~~~~d~~v~~w~~~ 413 (416)
T 2pm9_A 346 ETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAF-GGKLVQITPDGKGVSITNPK 413 (416)
T ss_dssp ---------------------CCSCCCSSCCCCCSTTCCCSCCCEEET-TTEEECBCTTSSCBCCBCCC
T ss_pred cccccccCCcccccccccccccccccccccccCCccccCCccceEEee-CCeEEEEeCCCCeEEEEEec
Confidence 00111677888999999 77899999999999999973
No 70
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.8e-35 Score=265.67 Aligned_cols=242 Identities=16% Similarity=0.346 Sum_probs=195.5
Q ss_pred cCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCc------------eEEeccCCC------------CCeeEEEEEec
Q psy2107 113 ILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGE------------HKLNIPGHG------------GPVKGVAWLYN 166 (391)
Q Consensus 113 ~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~------------~~~~~~~~~------------~~v~~l~~~~~ 166 (391)
..|.+.|++++|+ +++||+|+.||.|+|||+... ....+.+|. ..|.+++|
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~--- 101 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW--- 101 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE---
T ss_pred ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEE---
Confidence 4578999999998 679999999999999998543 366778998 88999999
Q ss_pred CCCC--eEEEEEeCCCcEEEEeecCCCCc-----------------------------------eeEEEE-EecCCCCeE
Q psy2107 167 DGKD--AAFISVSTDQTAMIWEWKVESNS-----------------------------------IECIHV-CRGHERGLE 208 (391)
Q Consensus 167 ~~~~--~~l~s~~~dg~v~iwd~~~~~~~-----------------------------------~~~~~~-~~~~~~~v~ 208 (391)
++++ .+|++++.||.|++||+...... ..+... ..+|...|.
T Consensus 102 ~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 181 (447)
T 3dw8_B 102 LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHIN 181 (447)
T ss_dssp CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCC
T ss_pred cCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceE
Confidence 5555 78999999999999997531110 011122 357999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee-------eecCccCcccEE
Q psy2107 209 TVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI-------TLKGHKEAISAV 281 (391)
Q Consensus 209 ~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~v~~~ 281 (391)
+++|+|++++|++| .||.|++||+++... .+. .+.+|...|.++
T Consensus 182 ~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~----------------------------~~~~~~~~~~~~~~~~~~v~~~ 232 (447)
T 3dw8_B 182 SISINSDYETYLSA-DDLRINLWHLEITDR----------------------------SFNIVDIKPANMEELTEVITAA 232 (447)
T ss_dssp EEEECTTSSEEEEE-CSSEEEEEETTEEEE----------------------------EEEEEECCCSSGGGCCCCEEEE
T ss_pred EEEEcCCCCEEEEe-CCCeEEEEECCCCCc----------------------------eeeeeecccccccccCcceEEE
Confidence 99999999999998 799999999974221 111 356899999999
Q ss_pred EeccCC--eEEEEECCCeEEEEecccCce----eEEEECCe-------------eeEEEEECCCCCEEEEeeCCCcEEEE
Q psy2107 282 QWTAVD--EIITSSWDHTLKIWDAELGGM----KSEIVGNK-------------SFFDVHYSPLSKLVITASADKQIRLY 342 (391)
Q Consensus 282 ~~~~~~--~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~-------------~i~~~~~~p~~~~l~~g~~dg~i~iw 342 (391)
+|+|++ .|++++.||.|++||+++++. ...+..+. .+.+++|+|++++|++++. +.|++|
T Consensus 233 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iw 311 (447)
T 3dw8_B 233 EFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVW 311 (447)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEE
T ss_pred EECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEE
Confidence 999764 799999999999999999886 67777765 7999999999999999998 999999
Q ss_pred cCCC-CCcceEEEEeccccCc---------------EEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 343 DPKV-KEGAIVKSTFSSHKEW---------------VQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 343 d~~~-~~~~~~~~~~~~h~~~---------------v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
|++. .. ++..+.+|... +..++|+| ++.+|++|+.||.|++||++
T Consensus 312 d~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~-~~~~l~s~s~dg~v~iwd~~ 372 (447)
T 3dw8_B 312 DLNMENR---PVETYQVHEYLRSKLCSLYENDCIFDKFECCWNG-SDSVVMTGSYNNFFRMFDRN 372 (447)
T ss_dssp ETTCCSS---CSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECT-TSSEEEEECSTTEEEEEETT
T ss_pred eCCCCcc---ccceeeccccccccccccccccccccceEEEECC-CCCEEEEeccCCEEEEEEcC
Confidence 9986 44 45566667532 33499999 66789999999999999974
No 71
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.9e-36 Score=268.81 Aligned_cols=244 Identities=16% Similarity=0.203 Sum_probs=194.9
Q ss_pred CCCcEEEEEec--CCEEEEEECCCeEEEEcCCC---ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC
Q psy2107 115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTRRG---EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV 189 (391)
Q Consensus 115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~---~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 189 (391)
|.++|++++|+ +++|++|+.||.|++||+.. .....+.+|...|.+++| ++++.+|++++.||.|++||+..
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~---s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDW---APKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEE---CTTTCCEEEEETTSSEEEC----
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEE---eCCCCEEEEEeCCCeEEEEEcCC
Confidence 66789999998 67999999999999999954 456678899999999999 77889999999999999999753
Q ss_pred CCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107 190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI 269 (391)
Q Consensus 190 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (391)
.. .......+.+|...|.+++|+|++++|++|+.|+.|++||+++++. .....
T Consensus 87 ~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--------------------------~~~~~ 139 (377)
T 3dwl_C 87 DG-TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEND--------------------------WWVSK 139 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-------------------------------CCCCE
T ss_pred CC-ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccc--------------------------ceeee
Confidence 22 1345667788999999999999999999999999999999976432 12355
Q ss_pred eecC-ccCcccEEEeccCC-eEEEEECCCeEEEEecc------------------cCceeEEEECCeeeEEEEECCCCCE
Q psy2107 270 TLKG-HKEAISAVQWTAVD-EIITSSWDHTLKIWDAE------------------LGGMKSEIVGNKSFFDVHYSPLSKL 329 (391)
Q Consensus 270 ~~~~-~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~------------------~~~~~~~~~~~~~i~~~~~~p~~~~ 329 (391)
.+.. |...|.+++|+|++ .|++++.|+.|++||+. .++++..+.+...|.+++|+|++++
T Consensus 140 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 219 (377)
T 3dwl_C 140 HLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNA 219 (377)
T ss_dssp EECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSC
T ss_pred EeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCE
Confidence 6666 99999999999655 69999999999999985 3445555534458999999999999
Q ss_pred EEEeeCCCcEEEEcCCCCCcc-eEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 330 VITASADKQIRLYDPKVKEGA-IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 330 l~~g~~dg~i~iwd~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
|++|+.||.|++||++..... ..+..+.+|...|++++|+| ++.+|++++.|+.+ +|+.
T Consensus 220 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~-~~~~ 279 (377)
T 3dwl_C 220 LAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWAN-ESAIVAAGYNYSPI-LLQG 279 (377)
T ss_dssp EEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEE-TTEEEEEESSSSEE-EECC
T ss_pred EEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcC-CCCEEEEEcCCcEE-EEEe
Confidence 999999999999999876632 12567788999999999999 66788888766555 6654
No 72
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.6e-34 Score=258.92 Aligned_cols=232 Identities=25% Similarity=0.461 Sum_probs=204.2
Q ss_pred cCCCCcEEEEEecCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107 113 ILHDDWVSAIDFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES 191 (391)
Q Consensus 113 ~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 191 (391)
.+|...|+|++++++++++|+.||.|++||+ +++....+.+|.+.|.+++| ++.++++|+.||.|++||+.
T Consensus 130 ~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~-----~~~~l~sg~~dg~i~vwd~~--- 201 (435)
T 1p22_A 130 SETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVRVWDVN--- 201 (435)
T ss_dssp CSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC-----CSSEEEEEETTSCEEEEESS---
T ss_pred cCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE-----CCCEEEEEcCCCeEEEEECC---
Confidence 3577889999999999999999999999999 56777788999999999998 56799999999999999965
Q ss_pred CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee
Q psy2107 192 NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL 271 (391)
Q Consensus 192 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (391)
..+.+..+.+|...|.+++|++ .++++|+.||.|++||++++.. ......+
T Consensus 202 -~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~--------------------------~~~~~~~ 252 (435)
T 1p22_A 202 -TGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTD--------------------------ITLRRVL 252 (435)
T ss_dssp -SCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSC--------------------------CEEEEEE
T ss_pred -CCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCC--------------------------ceeeeEe
Confidence 3457788889999999999974 5899999999999999976432 1123567
Q ss_pred cCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcc
Q psy2107 272 KGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGA 350 (391)
Q Consensus 272 ~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~ 350 (391)
.+|...|.+++| .+..+++|+.||.|++||+++++.+..+..+. .+.++++ +++++++|+.||.|++||++++.
T Consensus 253 ~~~~~~v~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~-- 327 (435)
T 1p22_A 253 VGHRAAVNVVDF-DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGA-- 327 (435)
T ss_dssp CCCSSCEEEEEE-ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCC--
T ss_pred cCCCCcEEEEEe-CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCC--
Confidence 789999999999 56789999999999999999999999998765 7888888 47899999999999999998876
Q ss_pred eEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 351 IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 351 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
.+..+.+|...|.+++| ++.+|++|+.||.|++||+
T Consensus 328 -~~~~~~~h~~~v~~~~~---~~~~l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 328 -CLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDL 363 (435)
T ss_dssp -EEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEEH
T ss_pred -EEEEEeCCcCcEEEEEe---cCCEEEEEeCCCcEEEEEC
Confidence 77888999999999999 3468999999999999996
No 73
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2e-34 Score=280.86 Aligned_cols=242 Identities=22% Similarity=0.359 Sum_probs=214.1
Q ss_pred cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEee
Q psy2107 111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW 187 (391)
Q Consensus 111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~ 187 (391)
.+.+|.+.|++++|+ +.+|++|+.||.|+|||+ ++.....+..|..+|.+++| ++++.+|++|+.||.|++||+
T Consensus 8 ~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~---s~~~~~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKF---IARKNWIIVGSDDFRIRVFNY 84 (814)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE---EGGGTEEEEEETTSEEEEEET
T ss_pred eeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEE---eCCCCEEEEEeCCCeEEEEEC
Confidence 345799999999998 669999999999999998 56677788899999999999 557889999999999999996
Q ss_pred cCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCc
Q psy2107 188 KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTP 267 (391)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (391)
. ....+..+.+|...|.+++|+|++++|++|+.||.|++||++++. ..
T Consensus 85 ~----~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~----------------------------~~ 132 (814)
T 3mkq_A 85 N----TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW----------------------------AL 132 (814)
T ss_dssp T----TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS----------------------------EE
T ss_pred C----CCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc----------------------------eE
Confidence 5 345677888999999999999999999999999999999997532 35
Q ss_pred eeeecCccCcccEEEecc-CC-eEEEEECCCeEEEEecccCceeEEEECC--eeeEEEEECC--CCCEEEEeeCCCcEEE
Q psy2107 268 LITLKGHKEAISAVQWTA-VD-EIITSSWDHTLKIWDAELGGMKSEIVGN--KSFFDVHYSP--LSKLVITASADKQIRL 341 (391)
Q Consensus 268 ~~~~~~~~~~v~~~~~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~i~~~~~~p--~~~~l~~g~~dg~i~i 341 (391)
...+.+|...|.+++|+| ++ .+++++.||.|++||+.++.....+..+ ..+.+++|+| ++.+|++|+.||.|++
T Consensus 133 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~ 212 (814)
T 3mkq_A 133 EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKI 212 (814)
T ss_dssp EEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEE
T ss_pred EEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEE
Confidence 567788999999999997 44 6999999999999999988887777654 5899999999 8999999999999999
Q ss_pred EcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 342 YDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 342 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
||++.+. ....+.+|...|++++|+| ++.++++++.||.|++||++
T Consensus 213 ~d~~~~~---~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vwd~~ 258 (814)
T 3mkq_A 213 WDYQTKS---CVATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNSS 258 (814)
T ss_dssp EETTTTE---EEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETT
T ss_pred EECCCCc---EEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCeEEEEECC
Confidence 9998765 6778889999999999999 66789999999999999974
No 74
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.1e-33 Score=258.01 Aligned_cols=259 Identities=24% Similarity=0.377 Sum_probs=213.8
Q ss_pred CccceEEEEEEeccCCCCCCcccCCCCcEEEEEec-CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCC
Q psy2107 91 SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH-NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDG 168 (391)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~-~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~ 168 (391)
+.++.+.+|...... ....+.+|.+.|++++|+ +..+++|+.||+|++||+ ++.....+.+|...|.+++|.+ .+
T Consensus 139 s~dg~i~vwd~~~~~--~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~-~~ 215 (464)
T 3v7d_B 139 ADDKMIRVYDSINKK--FLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVE-YK 215 (464)
T ss_dssp ETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEE-SS
T ss_pred cCCCcEEEEECCCCc--EEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEec-CC
Confidence 467889999764322 233455799999999998 449999999999999999 5667778889999999999987 35
Q ss_pred CCeEEEEEeCCCcEEEEeecCCCCcee-------------------EEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy2107 169 KDAAFISVSTDQTAMIWEWKVESNSIE-------------------CIHVCRGHERGLETVTVSESRQQFATGGWDCLLK 229 (391)
Q Consensus 169 ~~~~l~s~~~dg~v~iwd~~~~~~~~~-------------------~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~ 229 (391)
++.++++|+.||.|++||++....... .+..+.+|...|.++ +++++++++|+.||.|+
T Consensus 216 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~ 293 (464)
T 3v7d_B 216 NIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLI 293 (464)
T ss_dssp SCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEE
T ss_pred CCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEE
Confidence 788999999999999999764322111 356778899998887 56788999999999999
Q ss_pred EEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEECCCeEEEEecccCce
Q psy2107 230 IWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSSWDHTLKIWDAELGGM 308 (391)
Q Consensus 230 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~ 308 (391)
+||+++ ..++..+.+|...|.+++|+++ ..+++|+.||.|++||+++++.
T Consensus 294 vwd~~~-----------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~ 344 (464)
T 3v7d_B 294 VWDVAQ-----------------------------MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL 344 (464)
T ss_dssp EEETTT-----------------------------TEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred EEECCC-----------------------------CcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcE
Confidence 999976 3467778899999999999965 5699999999999999999999
Q ss_pred eEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEE
Q psy2107 309 KSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKL 387 (391)
Q Consensus 309 ~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~i 387 (391)
+..+..+. .+.+++|+ +++|++|+.||.|++||++... ..... .|...+..++|+| ++.++++++ ||.|++
T Consensus 345 ~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~---~~~~~-~~~~~~~~~~~~~-~~~~l~~~~-dg~i~i 416 (464)
T 3v7d_B 345 MYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYS---RKFSY-HHTNLSAITTFYV-SDNILVSGS-ENQFNI 416 (464)
T ss_dssp EEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC---EEEEE-ECTTCCCEEEEEE-CSSEEEEEE-TTEEEE
T ss_pred EEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCc---eeeee-cCCCCccEEEEEe-CCCEEEEec-CCeEEE
Confidence 99998765 88999997 5899999999999999998755 32232 3667788899999 667888888 899999
Q ss_pred EecC
Q psy2107 388 WDLR 391 (391)
Q Consensus 388 wdlr 391 (391)
||++
T Consensus 417 wd~~ 420 (464)
T 3v7d_B 417 YNLR 420 (464)
T ss_dssp EETT
T ss_pred EECC
Confidence 9974
No 75
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.7e-35 Score=262.59 Aligned_cols=235 Identities=14% Similarity=0.151 Sum_probs=191.8
Q ss_pred cEEEEEec--CCEEEEEECCCeEEEEcCCCceEE-eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCce
Q psy2107 118 WVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKL-NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSI 194 (391)
Q Consensus 118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~-~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 194 (391)
.+++++|+ +++|++++.||.|++||....... .+..| ..+....| ++++.+|++|+.||.|++||+. ..
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~---~~~~~~l~~~~~dg~i~iwd~~----~~ 129 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTA---KLQMRRFILGTTEGDIKVLDSN----FN 129 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEE---CSSSCEEEEEETTSCEEEECTT----SC
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEE---ecCCCEEEEEECCCCEEEEeCC----Cc
Confidence 34466776 779999999999999999554433 33334 33444455 6688999999999999999954 34
Q ss_pred eEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc
Q psy2107 195 ECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH 274 (391)
Q Consensus 195 ~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (391)
.....+.+|...|.+++|+|++++|++|+.||.|++||++++ ..+..+.+|
T Consensus 130 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~-----------------------------~~~~~~~~h 180 (420)
T 3vl1_A 130 LQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG-----------------------------SNPRTLIGH 180 (420)
T ss_dssp EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-----------------------------CCCEEEECC
T ss_pred ceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC-----------------------------cCceEEcCC
Confidence 566677799999999999999999999999999999999763 356678899
Q ss_pred cCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECC-------------------------eeeEEEEECCCCC
Q psy2107 275 KEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGN-------------------------KSFFDVHYSPLSK 328 (391)
Q Consensus 275 ~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------------------------~~i~~~~~~p~~~ 328 (391)
...|.+++|+|++ .|++++.|+.|++||+++++.+..+..+ ..+.+++|+|+++
T Consensus 181 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 260 (420)
T 3vl1_A 181 RATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK 260 (420)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC
Confidence 9999999999654 6999999999999999999998888642 2344455689999
Q ss_pred EEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 329 LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 329 ~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+|++|+.||.|++||++... .......+|...|++++|+|++..+|++|+.||.|++||++
T Consensus 261 ~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~ 321 (420)
T 3vl1_A 261 YVIAGHVSGVITVHNVFSKE--QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLR 321 (420)
T ss_dssp EEEEEETTSCEEEEETTTCC--EEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred EEEEEcCCCeEEEEECCCCc--eeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcC
Confidence 99999999999999998755 23334456889999999999555599999999999999985
No 76
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.4e-34 Score=253.24 Aligned_cols=246 Identities=15% Similarity=0.166 Sum_probs=195.4
Q ss_pred CCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCce----EEeccCCCCCeeEEEEEecCCCCe-EEEEEeCCCcEEEEe
Q psy2107 114 LHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEH----KLNIPGHGGPVKGVAWLYNDGKDA-AFISVSTDQTAMIWE 186 (391)
Q Consensus 114 ~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~----~~~~~~~~~~v~~l~~~~~~~~~~-~l~s~~~dg~v~iwd 186 (391)
+|.+.|++++|+ +++|++++.||.|++|++.... ...+..|...|.+++|+| ++. +|++|+.||.|++||
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID---NTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEE---SSSEEEEEEETTSCEEEEC
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECC---CCCcEEEEEcCCCeEEEEE
Confidence 699999999998 6799999999999999984433 556668999999999955 688 999999999999999
Q ss_pred e-cCCCCceeEEEEEec--CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107 187 W-KVESNSIECIHVCRG--HERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS 263 (391)
Q Consensus 187 ~-~~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (391)
+ . ... ...+.+ |...|.+++|+| +++|++++.|+.|++||+++...... ..
T Consensus 86 ~~~--~~~---~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~--------------------~~ 139 (342)
T 1yfq_A 86 LIG--SPS---FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVI--------------------AV 139 (342)
T ss_dssp SSS--SSS---EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCE--------------------EE
T ss_pred ecc--CCc---eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccc--------------------cc
Confidence 6 4 222 266778 999999999999 99999999999999999864100000 00
Q ss_pred CCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEeccc-Ccee-E-EE-ECCeeeEEEEECC-CCCEEEEeeCCCc
Q psy2107 264 SRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAEL-GGMK-S-EI-VGNKSFFDVHYSP-LSKLVITASADKQ 338 (391)
Q Consensus 264 ~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~-~-~~-~~~~~i~~~~~~p-~~~~l~~g~~dg~ 338 (391)
...++..+. |...|.+++|++++ +++++.|+.|++||+++ +... . .. .....+.+++|+| +++++++|+.||.
T Consensus 140 ~~~~~~~~~-~~~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~ 217 (342)
T 1yfq_A 140 KNLNSNNTK-VKNKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR 217 (342)
T ss_dssp EESCSSSSS-SCCCEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSE
T ss_pred cCCeeeEEe-eCCceEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCc
Confidence 011233333 78899999999866 99999999999999998 5532 2 22 2345899999999 9999999999999
Q ss_pred EEEEcCCCCCc---ceEEEEeccccC---------cEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 339 IRLYDPKVKEG---AIVKSTFSSHKE---------WVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 339 i~iwd~~~~~~---~~~~~~~~~h~~---------~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
|++|+++.... ......+..|.. .|++++|+| ++.+|++++.||.|++||++
T Consensus 218 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 218 VAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP-RHKFLYTAGSDGIISCWNLQ 281 (342)
T ss_dssp EEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECT-TTCCEEEEETTSCEEEEETT
T ss_pred EEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcC-CCCEEEEecCCceEEEEcCc
Confidence 99999977500 114455666654 999999999 56679999999999999974
No 77
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=8.7e-34 Score=243.01 Aligned_cols=211 Identities=20% Similarity=0.356 Sum_probs=176.2
Q ss_pred EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC--CCEEEEEeCCC
Q psy2107 149 LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES--RQQFATGGWDC 226 (391)
Q Consensus 149 ~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg 226 (391)
..+.+|.+.|++++| ++++++|++|+.|++|++||+. ......+..+.+|.+.|.+++|+++ +++|++|+.||
T Consensus 3 ~~~~~h~~~V~~~~~---s~~g~~las~s~D~~v~iw~~~--~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~ 77 (297)
T 2pm7_B 3 VIANAHNEMIHDAVM---DYYGKRMATCSSDKTIKIFEVE--GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 77 (297)
T ss_dssp EECCSCSSCEEEEEE---CTTSSEEEEEETTSCEEEEEBC--SSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTT
T ss_pred eeccCCcCceEEEEE---CCCCCEEEEEeCCCEEEEEecC--CCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCC
Confidence 456789999999999 7889999999999999999964 2334567788999999999999863 89999999999
Q ss_pred cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC---CeEEEEECCCeEEEEec
Q psy2107 227 LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV---DEIITSSWDHTLKIWDA 303 (391)
Q Consensus 227 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~l~s~~~dg~i~iwd~ 303 (391)
.|++||+++++. ..+..+.+|...|.+++|+|+ ..|++++.|+.|++||+
T Consensus 78 ~v~iWd~~~~~~---------------------------~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~ 130 (297)
T 2pm7_B 78 KVMIWKEENGRW---------------------------SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEF 130 (297)
T ss_dssp EEEEEEBSSSCB---------------------------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEB
T ss_pred EEEEEEcCCCce---------------------------EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEe
Confidence 999999976331 245567789999999999964 57999999999999999
Q ss_pred ccCce--eEEEECCe-eeEEEEECCC-------------CCEEEEeeCCCcEEEEcCCCCCc-ceEEEEeccccCcEEEE
Q psy2107 304 ELGGM--KSEIVGNK-SFFDVHYSPL-------------SKLVITASADKQIRLYDPKVKEG-AIVKSTFSSHKEWVQSV 366 (391)
Q Consensus 304 ~~~~~--~~~~~~~~-~i~~~~~~p~-------------~~~l~~g~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~ 366 (391)
+++.. ...+..|. .+.+++|+|+ +++|++|+.|+.|++||++.... ..+...+.+|...|.++
T Consensus 131 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v 210 (297)
T 2pm7_B 131 KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV 210 (297)
T ss_dssp CSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred cCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEE
Confidence 87632 34455444 8999999997 57999999999999999876442 22456788999999999
Q ss_pred EECCCC--CCEEEEeeCCCcEEEEecC
Q psy2107 367 RWSPID--PQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 367 ~~~~~~--~~~l~s~~~dg~v~iwdlr 391 (391)
+|+|++ +.+|+|++.|++|+|||++
T Consensus 211 ~~sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 211 AWSPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp EECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred EECCCCCCceEEEEEECCCcEEEEEeC
Confidence 999954 5789999999999999974
No 78
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=7.9e-35 Score=256.17 Aligned_cols=248 Identities=13% Similarity=0.223 Sum_probs=195.9
Q ss_pred cCCCCcEEEEEecC--C-EEEEEEC---CCeEEEEcCCCceE--EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEE
Q psy2107 113 ILHDDWVSAIDFHN--D-WILTGCY---DHSVHIWTRRGEHK--LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMI 184 (391)
Q Consensus 113 ~~h~~~V~~~~~~~--~-~l~t~~~---dg~i~iwd~~~~~~--~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~i 184 (391)
.+|.+.|++++|++ . ++++|+. ||.|++||+..... ....+|...|.+++|+|..+++.+|++|+.||.|++
T Consensus 15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i 94 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHI 94 (357)
T ss_dssp EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEE
T ss_pred cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEE
Confidence 46999999999983 3 5566666 99999999954433 233478999999999543323789999999999999
Q ss_pred EeecCCCCceeEEEEEecCCCCeEEEEE------cCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccc
Q psy2107 185 WEWKVESNSIECIHVCRGHERGLETVTV------SESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKE 258 (391)
Q Consensus 185 wd~~~~~~~~~~~~~~~~~~~~v~~l~~------~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (391)
||+.... ..+..+.+|...|.+++| +|++++|++|+.||.|++||++++..
T Consensus 95 wd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~-------------------- 151 (357)
T 3i2n_A 95 WNLEAPE---MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD-------------------- 151 (357)
T ss_dssp ECTTSCS---SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS--------------------
T ss_pred EeCCCCC---ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCC--------------------
Confidence 9965322 245677899999999955 67899999999999999999976431
Q ss_pred cccCCCCCceeeecCccC----cccEEE----ecc-CCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECC---C
Q psy2107 259 YSSASSRTPLITLKGHKE----AISAVQ----WTA-VDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSP---L 326 (391)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~----~v~~~~----~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p---~ 326 (391)
+...+..|.. .+.+++ |++ +..+++++.|+.|++||+++++......+...+.+++|+| +
T Consensus 152 --------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~ 223 (357)
T 3i2n_A 152 --------PVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDIS 223 (357)
T ss_dssp --------CSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSS
T ss_pred --------cceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCC
Confidence 3444544433 788888 554 4568999999999999999999887777788999999999 9
Q ss_pred CCEEEEeeCCCcEEEEcCCCCCcceE--EEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 327 SKLVITASADKQIRLYDPKVKEGAIV--KSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 327 ~~~l~~g~~dg~i~iwd~~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+.+|++|+.||.|++||++....... ...+.+|...|++++|+|++..+|++++.||.|++||++
T Consensus 224 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 224 MNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp CCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred CCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence 99999999999999999876432211 224458999999999999554489999999999999973
No 79
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=253.66 Aligned_cols=295 Identities=16% Similarity=0.204 Sum_probs=223.4
Q ss_pred ceeeEEe-CCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcc-----------cCCCCcEEEEEecC---CEEE
Q psy2107 66 IQFDFLI-AGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDC-----------ILHDDWVSAIDFHN---DWIL 130 (391)
Q Consensus 66 ~~~~f~~-~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~h~~~V~~~~~~~---~~l~ 130 (391)
...+|.+ +++++++ .+.++.+.+|............. .+|...|++++|++ .+++
T Consensus 47 ~~~~~s~~~~~~l~~----------~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 116 (408)
T 4a11_B 47 NTLDIEPVEGRYMLS----------GGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT 116 (408)
T ss_dssp EEEEECTTTCCEEEE----------EETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE
T ss_pred EEEEEecCCCCEEEE----------EcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE
Confidence 4568888 8887765 23578899998765443322221 25999999999973 5899
Q ss_pred EEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEE
Q psy2107 131 TGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETV 210 (391)
Q Consensus 131 t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l 210 (391)
+++.||.|++||+..........+...+.++.|.|.++++.++++++.||.|++||++ ....+..+.+|...|.++
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~----~~~~~~~~~~~~~~v~~~ 192 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK----SGSCSHILQGHRQEILAV 192 (408)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS----SSCCCEEECCCCSCEEEE
T ss_pred EEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC----CcceeeeecCCCCcEEEE
Confidence 9999999999999665555555588899999998876677899999999999999965 234566778899999999
Q ss_pred EEcCCCC-EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-e
Q psy2107 211 TVSESRQ-QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-E 288 (391)
Q Consensus 211 ~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~ 288 (391)
+|+|+++ +|++|+.||.|++||+++.......... ...............|...|.+++|+|++ .
T Consensus 193 ~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 259 (408)
T 4a11_B 193 SWSPRYDYILATASADSRVKLWDVRRASGCLITLDQ-------------HNGKKSQAVESANTAHNGKVNGLCFTSDGLH 259 (408)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCT-------------TTTCSCCCTTTSSCSCSSCEEEEEECTTSSE
T ss_pred EECCCCCcEEEEEcCCCcEEEEECCCCCcccccccc-------------cccccceeeccccccccCceeEEEEcCCCCE
Confidence 9999998 5899999999999999875421100000 00001112233446789999999999665 5
Q ss_pred EEEEECCCeEEEEecccCceeEEEECC------eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCc
Q psy2107 289 IITSSWDHTLKIWDAELGGMKSEIVGN------KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEW 362 (391)
Q Consensus 289 l~s~~~dg~i~iwd~~~~~~~~~~~~~------~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~ 362 (391)
+++++.||.|++||+.+++.......+ ..+........+..+++++.++.|++||+.++. .+..+.+|...
T Consensus 260 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~---~~~~~~~~~~~ 336 (408)
T 4a11_B 260 LLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGE---QITMLKGHYKT 336 (408)
T ss_dssp EEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCC---EEEEECCCSSC
T ss_pred EEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCc---ceeeeccCCCe
Confidence 999999999999999988765544322 122222223345566677789999999998876 77888999999
Q ss_pred EEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 363 VQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 363 v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
|++++|+| ++.+|++++.||.|++||++
T Consensus 337 v~~~~~s~-~~~~l~s~~~dg~i~iw~~~ 364 (408)
T 4a11_B 337 VDCCVFQS-NFQELYSGSRDCNILAWVPS 364 (408)
T ss_dssp EEEEEEET-TTTEEEEEETTSCEEEEEEC
T ss_pred EEEEEEcC-CCCEEEEECCCCeEEEEeCC
Confidence 99999999 66789999999999999974
No 80
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-34 Score=246.13 Aligned_cols=236 Identities=18% Similarity=0.293 Sum_probs=201.3
Q ss_pred cccCCCCcEEEEEec-CCEEEEEECCCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeec
Q psy2107 111 DCILHDDWVSAIDFH-NDWILTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWK 188 (391)
Q Consensus 111 ~~~~h~~~V~~~~~~-~~~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~ 188 (391)
.+.+|.+.|++++|. +++|++|+.||.|++||+. +.....+..|...|.+++| ++++.++++|+.||.|++|++.
T Consensus 13 ~l~~h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~~~dg~i~~~~~~ 89 (313)
T 3odt_A 13 TLKGHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCY---DSEKELLLFGGKDTMINGVPLF 89 (313)
T ss_dssp EECCCSSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEE---ETTTTEEEEEETTSCEEEEETT
T ss_pred HhhCCCCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEE---CCCCCEEEEecCCCeEEEEEee
Confidence 456799999999996 7799999999999999994 4556677889999999999 5678899999999999999975
Q ss_pred CCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCce
Q psy2107 189 VESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPL 268 (391)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (391)
.. .....+..+.+|...|.+++| +++++++++.||.|++||. ....
T Consensus 90 ~~-~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~-------------------------------~~~~ 135 (313)
T 3odt_A 90 AT-SGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKE-------------------------------GSLV 135 (313)
T ss_dssp CC-TTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEET-------------------------------TEEE
T ss_pred ec-CCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcC-------------------------------CcEE
Confidence 32 233556778899999999999 5679999999999999993 2366
Q ss_pred eeecCccCcccEEEecc--CCeEEEEECCCeEEEEecccCceeEEEEC--CeeeEEEEECCCCCEEEEeeCCCcEEEEcC
Q psy2107 269 ITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKSEIVG--NKSFFDVHYSPLSKLVITASADKQIRLYDP 344 (391)
Q Consensus 269 ~~~~~~~~~v~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~ 344 (391)
..+..|...+.++.|.+ +..+++++.|+.|++|| .++....+.. ...+.+++|+|++. +++++.||.|++||+
T Consensus 136 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~ 212 (313)
T 3odt_A 136 YNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDM 212 (313)
T ss_dssp EEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEET
T ss_pred EecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEEC
Confidence 77888999999999985 56799999999999999 4455556654 45899999999988 889999999999999
Q ss_pred CCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 345 KVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 345 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+..+ .+..+.+|...|++++|+|++ . |++++.||.|++||++
T Consensus 213 ~~~~---~~~~~~~~~~~i~~~~~~~~~-~-l~~~~~dg~v~iwd~~ 254 (313)
T 3odt_A 213 HTGD---VLRTYEGHESFVYCIKLLPNG-D-IVSCGEDRTVRIWSKE 254 (313)
T ss_dssp TTCC---EEEEEECCSSCEEEEEECTTS-C-EEEEETTSEEEEECTT
T ss_pred Cchh---hhhhhhcCCceEEEEEEecCC-C-EEEEecCCEEEEEECC
Confidence 8776 777888999999999999944 4 8999999999999974
No 81
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7.3e-35 Score=251.92 Aligned_cols=256 Identities=20% Similarity=0.316 Sum_probs=193.0
Q ss_pred HHHHHhccCCCCCCCCCceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec---
Q psy2107 49 LINEILKEDSNEDNYKDIQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--- 125 (391)
Q Consensus 49 ~~~~ll~~~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--- 125 (391)
+++..+..+.... ....|.++|+.+++ .+.++.+++|............+.+|.+.|++++|+
T Consensus 4 ~~~~~~~~H~~~V----~~v~~s~~g~~las----------gs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~ 69 (316)
T 3bg1_A 4 VINTVDTSHEDMI----HDAQMDYYGTRLAT----------CSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPM 69 (316)
T ss_dssp ----------CCE----EEEEECGGGCEEEE----------EETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGG
T ss_pred eeeeecccccCeE----EEeeEcCCCCEEEE----------EeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCC
Confidence 4455555554433 44688899988776 346889999987643221234566899999999995
Q ss_pred -CCEEEEEECCCeEEEEcCCC---ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe
Q psy2107 126 -NDWILTGCYDHSVHIWTRRG---EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR 201 (391)
Q Consensus 126 -~~~l~t~~~dg~i~iwd~~~---~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 201 (391)
+++|++|+.|++|++||+.. .....+.+|...|.+++|+|. .++.+|++|+.||+|++||++... .......+.
T Consensus 70 ~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~-~~g~~lasgs~D~~i~lwd~~~~~-~~~~~~~~~ 147 (316)
T 3bg1_A 70 YGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPH-DYGLILACGSSDGAISLLTYTGEG-QWEVKKINN 147 (316)
T ss_dssp GSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCT-TTCSCEEEECSSSCEEEEEECSSS-CEEECCBTT
T ss_pred CCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCC-CCCcEEEEEcCCCCEEEEecCCCC-Ccceeeeec
Confidence 57999999999999999954 355677899999999999542 237799999999999999976321 223345567
Q ss_pred cCCCCeEEEEEcCC-----------------CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107 202 GHERGLETVTVSES-----------------RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS 264 (391)
Q Consensus 202 ~~~~~v~~l~~~~~-----------------~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (391)
+|...|.+++|+|+ +++|++|+.|+.|++||++....
T Consensus 148 ~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~-------------------------- 201 (316)
T 3bg1_A 148 AHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQ-------------------------- 201 (316)
T ss_dssp SSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSC--------------------------
T ss_pred cccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCc--------------------------
Confidence 89999999999997 46899999999999999964211
Q ss_pred CCceeeecCccCcccEEEeccC-----CeEEEEECCCeEEEEecccCc----eeEEE-ECCeeeEEEEECCCCCEEEEee
Q psy2107 265 RTPLITLKGHKEAISAVQWTAV-----DEIITSSWDHTLKIWDAELGG----MKSEI-VGNKSFFDVHYSPLSKLVITAS 334 (391)
Q Consensus 265 ~~~~~~~~~~~~~v~~~~~~~~-----~~l~s~~~dg~i~iwd~~~~~----~~~~~-~~~~~i~~~~~~p~~~~l~~g~ 334 (391)
..+...+.+|...|.+++|+|+ ..|++++.|++|++||+.+.. ....+ .+...|.+++|+|++++|++|+
T Consensus 202 ~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~ 281 (316)
T 3bg1_A 202 WKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSG 281 (316)
T ss_dssp EEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEE
T ss_pred cceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEc
Confidence 1245677899999999999976 469999999999999997631 11222 3455899999999999999999
Q ss_pred CCCcEEEEcCCC
Q psy2107 335 ADKQIRLYDPKV 346 (391)
Q Consensus 335 ~dg~i~iwd~~~ 346 (391)
.|+.|++|+...
T Consensus 282 ~D~~v~lw~~~~ 293 (316)
T 3bg1_A 282 GDNKVTLWKESV 293 (316)
T ss_dssp SSSCEEEEEECT
T ss_pred CCCeEEEEEECC
Confidence 999999999754
No 82
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.8e-33 Score=253.06 Aligned_cols=252 Identities=20% Similarity=0.376 Sum_probs=216.8
Q ss_pred CccceEEEEEEeccCCCCCCcccCCCCcEEEEEecCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCC
Q psy2107 91 SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGK 169 (391)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~ 169 (391)
+.++.+.+|....... ...+.+|...|.+++++++.+++|+.||.|++||+ ++.....+.+|...|.+++| +
T Consensus 176 ~~dg~i~vwd~~~~~~--~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~-----~ 248 (445)
T 2ovr_B 176 STDRTLKVWNAETGEC--IHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-----D 248 (445)
T ss_dssp ETTSCEEEEETTTTEE--EEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-----C
T ss_pred eCCCeEEEEECCcCcE--EEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-----C
Confidence 4577888887643221 23455799999999999999999999999999999 56777788899999999999 5
Q ss_pred CeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCC
Q psy2107 170 DAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEG 249 (391)
Q Consensus 170 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~ 249 (391)
+.++++|+.||.|++||++ ....+..+.+|...|.+++| ++.++++|+.||.|++||+++
T Consensus 249 ~~~l~~~~~dg~i~iwd~~----~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~-------------- 308 (445)
T 2ovr_B 249 GRRVVSGAYDFMVKVWDPE----TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET-------------- 308 (445)
T ss_dssp SSCEEEEETTSCEEEEEGG----GTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTT--------------
T ss_pred CCEEEEEcCCCEEEEEECC----CCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCC--------------
Confidence 6789999999999999965 44678888899999999999 788999999999999999976
Q ss_pred ccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEEC----CeeeEEEEECC
Q psy2107 250 TTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG----NKSFFDVHYSP 325 (391)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~i~~~~~~p 325 (391)
...+..+.+|...+.++.++ ++.+++++.||.|++||+++++.+..+.. ...+.+++|+
T Consensus 309 ---------------~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~- 371 (445)
T 2ovr_B 309 ---------------GNCIHTLTGHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN- 371 (445)
T ss_dssp ---------------CCEEEEECCCCSCEEEEEEE-TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC-
T ss_pred ---------------CCEEEEEcCCcccEEEEEEe-CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC-
Confidence 34667788899999999886 46899999999999999999999999874 3489999996
Q ss_pred CCCEEEEeeCCCcEEEEcCCCCCcceEEEEe-----ccccCcEEEEEECCCCCCEEEEeeCCCc----EEEEecC
Q psy2107 326 LSKLVITASADKQIRLYDPKVKEGAIVKSTF-----SSHKEWVQSVRWSPIDPQLFVSASFDNS----VKLWDLR 391 (391)
Q Consensus 326 ~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~l~s~~~dg~----v~iwdlr 391 (391)
+++|++|+.||.|++||+.+++ .+..+ .+|.+.|++++|+| ++.++++|+.||+ |.|||++
T Consensus 372 -~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~~~~~~~~v~~~~~s~-~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 372 -KNFVITSSDDGTVKLWDLKTGE---FIRNLVTLESGGSGGVVWRIRASN-TKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp -SSEEEEEETTSEEEEEETTTCC---EEEEEEECTTGGGTCEEEEEEECS-SEEEEEEECSSSSSCCEEEEEECC
T ss_pred -CCEEEEEeCCCeEEEEECCCCc---eeeeeeccccCCCCceEEEEEecC-CEEEEEEcccCCCCccEEEEEECC
Confidence 6899999999999999998876 55555 47889999999999 7778999999998 9999974
No 83
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.4e-33 Score=247.56 Aligned_cols=268 Identities=17% Similarity=0.246 Sum_probs=199.8
Q ss_pred CcccCCCCcEEEEEecC-----CEEEEEECCCeEEEEcCC--CceE-EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCc
Q psy2107 110 LDCILHDDWVSAIDFHN-----DWILTGCYDHSVHIWTRR--GEHK-LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQT 181 (391)
Q Consensus 110 ~~~~~h~~~V~~~~~~~-----~~l~t~~~dg~i~iwd~~--~~~~-~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~ 181 (391)
..+.+|.+.|++++|++ ++|++|+.||.|++||+. +..+ ..+.+|...|.+++| ++++.+|++++.||.
T Consensus 33 ~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~---~~~~~~l~s~~~dg~ 109 (368)
T 3mmy_A 33 EVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCW---SDDGSKVFTASCDKT 109 (368)
T ss_dssp ECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEE---CTTSSEEEEEETTSE
T ss_pred EeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEE---CcCCCEEEEEcCCCc
Confidence 34567999999999983 699999999999999995 4444 577889999999999 778999999999999
Q ss_pred EEEEeecCCCCceeEEEEEecCCCCeEEEEE--cCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCc---------
Q psy2107 182 AMIWEWKVESNSIECIHVCRGHERGLETVTV--SESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGT--------- 250 (391)
Q Consensus 182 v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~--------- 250 (391)
|++||++ .. ..+ .+..|...|.+++| +|++++|++++.||.|++||+++++.............
T Consensus 110 v~iwd~~--~~--~~~-~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (368)
T 3mmy_A 110 AKMWDLS--SN--QAI-QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAV 184 (368)
T ss_dssp EEEEETT--TT--EEE-EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEE
T ss_pred EEEEEcC--CC--Cce-eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeE
Confidence 9999965 22 333 35679999999999 89999999999999999999988665432211110000
Q ss_pred -cccccccccccCCCC-Cceeee-cCccCcccEEEecc-CC----eEEEEECCCeEEEEecccC---ceeEEEECCe---
Q psy2107 251 -TSKKRKKEYSSASSR-TPLITL-KGHKEAISAVQWTA-VD----EIITSSWDHTLKIWDAELG---GMKSEIVGNK--- 316 (391)
Q Consensus 251 -~~~~~~~~~~~~~~~-~~~~~~-~~~~~~v~~~~~~~-~~----~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~--- 316 (391)
.........++.... ...... ..+...+.++.+.+ .. .+++++.||.|++||++.. .....+..+.
T Consensus 185 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 264 (368)
T 3mmy_A 185 VATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNG 264 (368)
T ss_dssp EEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC-
T ss_pred EEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccc
Confidence 000000111111111 111111 12233445555542 11 2999999999999999987 5677777776
Q ss_pred ----------eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEE
Q psy2107 317 ----------SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 386 (391)
Q Consensus 317 ----------~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~ 386 (391)
++.+++|+|++++|++|+.||.|++||+++++ ++..+.+|...|++++|+| ++.+|++++.|+..+
T Consensus 265 ~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~v~~~~~s~-~g~~l~~~s~d~~~~ 340 (368)
T 3mmy_A 265 TNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART---KLKTSEQLDQPISACCFNH-NGNIFAYASSYDWSK 340 (368)
T ss_dssp ---CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE---EEEECCCCSSCEEEEEECT-TSSCEEEEECCCSTT
T ss_pred ccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc---EEEEecCCCCCceEEEECC-CCCeEEEEecccccc
Confidence 49999999999999999999999999998765 7788899999999999999 666799999888655
Q ss_pred EEe
Q psy2107 387 LWD 389 (391)
Q Consensus 387 iwd 389 (391)
.|+
T Consensus 341 ~~~ 343 (368)
T 3mmy_A 341 GHE 343 (368)
T ss_dssp CGG
T ss_pred ccc
Confidence 554
No 84
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.9e-34 Score=254.57 Aligned_cols=243 Identities=15% Similarity=0.285 Sum_probs=199.9
Q ss_pred CCCCcEEEEEecC------CEEEEEECCCeEEEEcCC-CceEEecc-----CCCCCeeEEEEEecCCC-CeEEEEEeCCC
Q psy2107 114 LHDDWVSAIDFHN------DWILTGCYDHSVHIWTRR-GEHKLNIP-----GHGGPVKGVAWLYNDGK-DAAFISVSTDQ 180 (391)
Q Consensus 114 ~h~~~V~~~~~~~------~~l~t~~~dg~i~iwd~~-~~~~~~~~-----~~~~~v~~l~~~~~~~~-~~~l~s~~~dg 180 (391)
+|.+.|++++|++ ..+++++.++.|++||+. +..+..+. .|...|.+++|+|.... +.+|++|+.||
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg 95 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG 95 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC
Confidence 6999999999983 367777778899999995 44444333 36788999999875322 78999999999
Q ss_pred cEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccccc
Q psy2107 181 TAMIWEWKVESNSIECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEY 259 (391)
Q Consensus 181 ~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (391)
.|++||+. ..+.+..+.+|...|.+++|+| ++++|++|+.||.|++||+++++
T Consensus 96 ~i~v~d~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---------------------- 149 (366)
T 3k26_A 96 IIRIINPI----TMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT---------------------- 149 (366)
T ss_dssp EEEEECTT----TCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE----------------------
T ss_pred EEEEEEch----hceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe----------------------
Confidence 99999964 3466778889999999999999 99999999999999999997633
Q ss_pred ccCCCCCceeee---cCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEE----------------------
Q psy2107 260 SSASSRTPLITL---KGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIV---------------------- 313 (391)
Q Consensus 260 ~~~~~~~~~~~~---~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~---------------------- 313 (391)
....+ ..|...|.+++|++++ .+++++.||.|++||+++++....+.
T Consensus 150 -------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (366)
T 3k26_A 150 -------LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFP 222 (366)
T ss_dssp -------EEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCC
T ss_pred -------EEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccC
Confidence 44444 6899999999999654 69999999999999998776543332
Q ss_pred -------CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCc-----------ceEEEEeccccCcEEEEEECCCC-CC
Q psy2107 314 -------GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEG-----------AIVKSTFSSHKEWVQSVRWSPID-PQ 374 (391)
Q Consensus 314 -------~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~-----------~~~~~~~~~h~~~v~~~~~~~~~-~~ 374 (391)
+...|.+++|+ ++++++++.|+.|++||++.... ......+..|...|++++|+|+. +.
T Consensus 223 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~ 300 (366)
T 3k26_A 223 DFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK 300 (366)
T ss_dssp SEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS
T ss_pred ccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc
Confidence 44589999998 78999999999999999876532 13567788899999999999941 78
Q ss_pred EEEEeeCCCcEEEEecC
Q psy2107 375 LFVSASFDNSVKLWDLR 391 (391)
Q Consensus 375 ~l~s~~~dg~v~iwdlr 391 (391)
+|++++.||.|++||++
T Consensus 301 ~l~~~~~dg~i~vwd~~ 317 (366)
T 3k26_A 301 MLALGNQVGKLYVWDLE 317 (366)
T ss_dssp EEEEECTTSCEEEEECC
T ss_pred EEEEEecCCcEEEEECC
Confidence 99999999999999984
No 85
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.1e-33 Score=283.20 Aligned_cols=241 Identities=23% Similarity=0.413 Sum_probs=211.4
Q ss_pred CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107 110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE 186 (391)
Q Consensus 110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd 186 (391)
..+.+|.+.|++++|+ ++++++|+.||+|++||. ++..+..+.+|.+.|.+++| ++++.++++|+.||.|++||
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~---s~~~~~l~s~~~d~~v~vwd 685 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAF---SSDDSYIATCSADKKVKIWD 685 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSEEEEEE
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEE---ecCCCEEEEEeCCCeEEEEE
Confidence 4456899999999998 679999999999999999 66778889999999999999 77899999999999999999
Q ss_pred ecCCCCceeEEEEEecCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107 187 WKVESNSIECIHVCRGHERGLETVTVSE--SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS 264 (391)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (391)
+. ....+..+.+|...|.+++|+| ++.++++|+.||.|++||+++
T Consensus 686 ~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~----------------------------- 732 (1249)
T 3sfz_A 686 SA----TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ----------------------------- 732 (1249)
T ss_dssp TT----TCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS-----------------------------
T ss_pred CC----CCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC-----------------------------
Confidence 65 3467888899999999999999 566899999999999999976
Q ss_pred CCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEE------------------------------
Q psy2107 265 RTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIV------------------------------ 313 (391)
Q Consensus 265 ~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~------------------------------ 313 (391)
......+.+|...|.+++|+|++ .+++++.||.|++||+.++.....+.
T Consensus 733 ~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~ 812 (1249)
T 3sfz_A 733 KECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDK 812 (1249)
T ss_dssp SSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSE
T ss_pred cchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCE
Confidence 34677788999999999999654 69999999999999998776544432
Q ss_pred --------------------------CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEE
Q psy2107 314 --------------------------GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVR 367 (391)
Q Consensus 314 --------------------------~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 367 (391)
+...+.+++|+|+++++++|+.||.|++||+.++. ....+.+|...|++++
T Consensus 813 l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~---~~~~~~~h~~~v~~v~ 889 (1249)
T 3sfz_A 813 IIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRL---KVADCRGHLSWVHGVM 889 (1249)
T ss_dssp EEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTE---EEEEECCCSSCEEEEE
T ss_pred EEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc---eeeecCCCccceEEEE
Confidence 12367889999999999999999999999998765 6778899999999999
Q ss_pred ECCCCCCEEEEeeCCCcEEEEec
Q psy2107 368 WSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 368 ~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
|+| ++.+|++++.||.|++||+
T Consensus 890 ~sp-dg~~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 890 FSP-DGSSFLTASDDQTIRVWET 911 (1249)
T ss_dssp ECT-TSSEEEEEETTSCEEEEEH
T ss_pred ECC-CCCEEEEEeCCCeEEEEEc
Confidence 999 6678999999999999985
No 86
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.4e-33 Score=252.43 Aligned_cols=260 Identities=18% Similarity=0.223 Sum_probs=205.4
Q ss_pred CccceEEEEEEeccCC--CCCCcccCCCCcEEEEEec---CCEEEEEECCCeEEEEcCCC--------ceEEeccCCCCC
Q psy2107 91 SSENVIDVEYLESTPT--PSPLDCILHDDWVSAIDFH---NDWILTGCYDHSVHIWTRRG--------EHKLNIPGHGGP 157 (391)
Q Consensus 91 ~~~~~~~~~~~~~~~~--~~~~~~~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~~~--------~~~~~~~~~~~~ 157 (391)
+.++.+.+|....... .....+.+|.+.|++++|+ +++|++|+.||+|+|||+.. ..+..+.+|...
T Consensus 54 ~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~ 133 (402)
T 2aq5_A 54 SGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKR 133 (402)
T ss_dssp SSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSC
T ss_pred cCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCe
Confidence 4678899997643211 2334566899999999997 46999999999999999943 456778899999
Q ss_pred eeEEEEEecCCCC-eEEEEEeCCCcEEEEeecCCCCceeEEEEE--ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy2107 158 VKGVAWLYNDGKD-AAFISVSTDQTAMIWEWKVESNSIECIHVC--RGHERGLETVTVSESRQQFATGGWDCLLKIWSAD 234 (391)
Q Consensus 158 v~~l~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~--~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~ 234 (391)
|.+++| ++++ .+|++|+.||.|++||++ ....+..+ .+|...|.+++|+|++++|++++.||.|++||++
T Consensus 134 v~~~~~---~p~~~~~l~s~~~dg~i~iwd~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 206 (402)
T 2aq5_A 134 VGIVAW---HPTAQNVLLSAGCDNVILVWDVG----TGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPR 206 (402)
T ss_dssp EEEEEE---CSSBTTEEEEEETTSCEEEEETT----TTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETT
T ss_pred EEEEEE---CcCCCCEEEEEcCCCEEEEEECC----CCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCC
Confidence 999999 6666 699999999999999965 34667777 7899999999999999999999999999999997
Q ss_pred CCCCCCCCCCCCCCCccccccccccccCCCCCceeee-cCccCc-ccEEEeccCCeE-EEE---ECCCeEEEEecccCce
Q psy2107 235 ISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL-KGHKEA-ISAVQWTAVDEI-ITS---SWDHTLKIWDAELGGM 308 (391)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~l-~s~---~~dg~i~iwd~~~~~~ 308 (391)
++ ..+..+ ..|... +.++.|++++.+ ++| +.|+.|++||++++..
T Consensus 207 ~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 207 KG-----------------------------TVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp TT-----------------------------EEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred CC-----------------------------ceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC
Confidence 63 345556 677765 899999987774 455 4899999999998764
Q ss_pred -eEEE--ECCeeeEEEEECCCCCEEE-EeeCCCcEEEEcCCCCCc-ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCC
Q psy2107 309 -KSEI--VGNKSFFDVHYSPLSKLVI-TASADKQIRLYDPKVKEG-AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN 383 (391)
Q Consensus 309 -~~~~--~~~~~i~~~~~~p~~~~l~-~g~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg 383 (391)
.... .+...+.+++|+|++++|+ +|+.||.|++||+...+. ...+..+. |...|.+++|+| ++.++++ .|+
T Consensus 258 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~-~~~~v~~~~~sp-~~~~~~s--~~~ 333 (402)
T 2aq5_A 258 PLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS-SKESQRGMGYMP-KRGLEVN--KCE 333 (402)
T ss_dssp CSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC-CSSCCSEEEECC-GGGSCGG--GTE
T ss_pred CceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc-cCCcccceEEec-cccccee--cce
Confidence 3333 3456899999999999886 455799999999987652 11222232 668999999999 5555553 567
Q ss_pred cEEEEec
Q psy2107 384 SVKLWDL 390 (391)
Q Consensus 384 ~v~iwdl 390 (391)
.+++|++
T Consensus 334 ~~~~~~l 340 (402)
T 2aq5_A 334 IARFYKL 340 (402)
T ss_dssp EEEEEEE
T ss_pred eEEEEEc
Confidence 9999986
No 87
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.8e-33 Score=255.34 Aligned_cols=276 Identities=14% Similarity=0.255 Sum_probs=209.8
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCC---------CCCcccCCC------------CcEEEEEe
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTP---------SPLDCILHD------------DWVSAIDF 124 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~h~------------~~V~~~~~ 124 (391)
...+|.++|+++++ .+.++.+.+|........ ....+.+|. +.|++++|
T Consensus 32 ~~v~~s~~g~~la~----------g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~ 101 (447)
T 3dw8_B 32 STVEFNHSGELLAT----------GDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW 101 (447)
T ss_dssp EEEEECSSSSEEEE----------EETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE
T ss_pred EEEEECCCCCEEEE----------EcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEE
Confidence 44688999988875 235788999987644310 123455788 88999999
Q ss_pred c--C--CEEEEEECCCeEEEEcCCCceE-----------------------------------------EeccCCCCCee
Q psy2107 125 H--N--DWILTGCYDHSVHIWTRRGEHK-----------------------------------------LNIPGHGGPVK 159 (391)
Q Consensus 125 ~--~--~~l~t~~~dg~i~iwd~~~~~~-----------------------------------------~~~~~~~~~v~ 159 (391)
+ + ..|++++.||+|++||+..... ....+|...|.
T Consensus 102 ~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 181 (447)
T 3dw8_B 102 LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHIN 181 (447)
T ss_dssp CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCC
T ss_pred cCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceE
Confidence 8 3 5899999999999999843222 11367999999
Q ss_pred EEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEE-------EEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEE
Q psy2107 160 GVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIH-------VCRGHERGLETVTVSESR-QQFATGGWDCLLKIW 231 (391)
Q Consensus 160 ~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-------~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iw 231 (391)
+++| ++++.+|++| .||.|++||++. ....+. .+.+|...|.+++|+|++ ++|++|+.||.|++|
T Consensus 182 ~~~~---~~~~~~l~s~-~d~~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 254 (447)
T 3dw8_B 182 SISI---NSDYETYLSA-DDLRINLWHLEI---TDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLC 254 (447)
T ss_dssp EEEE---CTTSSEEEEE-CSSEEEEEETTE---EEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred EEEE---cCCCCEEEEe-CCCeEEEEECCC---CCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEE
Confidence 9999 7788999998 799999999642 122333 245799999999999998 999999999999999
Q ss_pred ECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccC------------cccEEEeccCCe-EEEEECCCeE
Q psy2107 232 SADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKE------------AISAVQWTAVDE-IITSSWDHTL 298 (391)
Q Consensus 232 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~v~~~~~~~~~~-l~s~~~dg~i 298 (391)
|+++++... .....+..|.. .|.+++|+|++. |++++. +.|
T Consensus 255 d~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v 308 (447)
T 3dw8_B 255 DMRASALCD-------------------------RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSV 308 (447)
T ss_dssp ETTTCSSSC-------------------------TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEE
T ss_pred ECcCCcccc-------------------------ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeE
Confidence 998755311 12344555554 999999997665 777777 999
Q ss_pred EEEeccc-CceeEEEECCeee----------------EEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec----
Q psy2107 299 KIWDAEL-GGMKSEIVGNKSF----------------FDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS---- 357 (391)
Q Consensus 299 ~iwd~~~-~~~~~~~~~~~~i----------------~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~---- 357 (391)
++||+++ ++++..+..+..+ ..++|+|++++|++|+.||.|++||+.+++ .. .+.
T Consensus 309 ~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~---~~-~~~~~~~ 384 (447)
T 3dw8_B 309 KVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKR---DI-TLEASRE 384 (447)
T ss_dssp EEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCC---EE-EEECCST
T ss_pred EEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCc---ce-eeeeccc
Confidence 9999997 8888888877643 349999999999999999999999998765 22 111
Q ss_pred -----------------------------cccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 358 -----------------------------SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 358 -----------------------------~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
.+...|.+++|+| ++.+||+++.++ +++|.-
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p-~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 385 NNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHP-KENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp TCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECS-SSSEEEEECSSC-EEEEEC
T ss_pred ccccccccCCccccccCCcccccccccccccCCceeEEEECC-CCCEEEEEecce-eeeecc
Confidence 2345789999999 667888888765 788864
No 88
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.3e-34 Score=253.58 Aligned_cols=220 Identities=24% Similarity=0.376 Sum_probs=184.2
Q ss_pred EEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCE
Q psy2107 140 IWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQ 218 (391)
Q Consensus 140 iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 218 (391)
.|+. +......+.+|.+.|++++| +|++.+|++|+.||+|++||+. .......+..|...|.+++|+|++++
T Consensus 50 ~~~~~~~~~~~~l~gH~~~V~~~~~---sp~~~~l~s~s~D~~v~iWd~~----~~~~~~~~~~h~~~v~~~~~s~~g~~ 122 (380)
T 3iz6_a 50 SFNPTDLVCCRTLQGHSGKVYSLDW---TPEKNWIVSASQDGRLIVWNAL----TSQKTHAIKLHCPWVMECAFAPNGQS 122 (380)
T ss_dssp CCCCCCCEEEEEECCCSSCEEEEEE---CTTSSCEEEEETTSEEEEEETT----TTEEEEEEECCCTTCCCCEECTTSSE
T ss_pred ccccceeEEeecccccccEEEEEEE---cCCCCEEEEEeCCCeEEEEECC----CCccceEEecCCCCEEEEEECCCCCE
Confidence 3554 34455678899999999999 7788999999999999999954 34667888999999999999999999
Q ss_pred EEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC--CeEEEEECCC
Q psy2107 219 FATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV--DEIITSSWDH 296 (391)
Q Consensus 219 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~dg 296 (391)
|++|+.|+.+++||+.+..... ........+.+|...|.++.|.|. ..|++|+.|+
T Consensus 123 las~~~d~~v~iw~~~~~~~~~----------------------~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~ 180 (380)
T 3iz6_a 123 VACGGLDSACSIFNLSSQADRD----------------------GNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQ 180 (380)
T ss_dssp EEECCSSSCCEEEECCCCSSCC----------------------CSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTS
T ss_pred EEEeeCCCcEEEEECCCCcccc----------------------CCccceeeccCCCcceEEEEEecCCCCEEEEECCCC
Confidence 9999999999999997533210 112244567899999999999964 4599999999
Q ss_pred eEEEEecccCceeEEEE-----CC-eeeEEEEECC-CCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEEC
Q psy2107 297 TLKIWDAELGGMKSEIV-----GN-KSFFDVHYSP-LSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS 369 (391)
Q Consensus 297 ~i~iwd~~~~~~~~~~~-----~~-~~i~~~~~~p-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 369 (391)
+|++||+.+++.+..+. .| ..+.+++|+| ++++|++|+.|+.|++||++... .....+.+|...|++++|+
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~--~~~~~~~~h~~~v~~v~~~ 258 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS--RAVRTYHGHEGDINSVKFF 258 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC--CCCEEECCCSSCCCEEEEC
T ss_pred cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC--cceEEECCcCCCeEEEEEe
Confidence 99999999999888773 33 3799999977 78999999999999999997432 2556788999999999999
Q ss_pred CCCCCEEEEeeCCCcEEEEecC
Q psy2107 370 PIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 370 ~~~~~~l~s~~~dg~v~iwdlr 391 (391)
| ++.+|+||+.||+|++||++
T Consensus 259 p-~~~~l~s~s~D~~i~lwd~~ 279 (380)
T 3iz6_a 259 P-DGQRFGTGSDDGTCRLFDMR 279 (380)
T ss_dssp T-TSSEEEEECSSSCEEEEETT
T ss_pred c-CCCeEEEEcCCCeEEEEECC
Confidence 9 66789999999999999985
No 89
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-34 Score=259.13 Aligned_cols=241 Identities=14% Similarity=0.194 Sum_probs=191.2
Q ss_pred cCCCCcEEEEEecC---CEEEEEECCCeEEEEcCCC----c---eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcE
Q psy2107 113 ILHDDWVSAIDFHN---DWILTGCYDHSVHIWTRRG----E---HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTA 182 (391)
Q Consensus 113 ~~h~~~V~~~~~~~---~~l~t~~~dg~i~iwd~~~----~---~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v 182 (391)
.+|.+.|++++|++ ++|++|+.||+|+|||+.. . ....+ .|...|.+++| ++++.+|++|+.||.|
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~---~~~~~~l~s~s~dg~i 135 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITM---IPNFDAFAVSSKDGQI 135 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEE---CTTSSEEEEEETTSEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEE---eCCCCEEEEEeCCCEE
Confidence 46999999999975 5999999999999999832 2 12222 59999999999 6788999999999999
Q ss_pred EEEeecCC-CCce------eEEEEEe--c--CCCCeEEEE--EcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCC
Q psy2107 183 MIWEWKVE-SNSI------ECIHVCR--G--HERGLETVT--VSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEG 249 (391)
Q Consensus 183 ~iwd~~~~-~~~~------~~~~~~~--~--~~~~v~~l~--~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~ 249 (391)
++||++.. .... ..+..+. . +...+.++. +++++.+|++|+.||.|++||+++
T Consensus 136 ~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~-------------- 201 (437)
T 3gre_A 136 IVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRT-------------- 201 (437)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTT--------------
T ss_pred EEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCC--------------
Confidence 99997411 1111 1122222 1 456677777 568899999999999999999976
Q ss_pred ccccccccccccCCCCCceeeecC--ccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEE--CCeeeEEEEEC
Q psy2107 250 TTSKKRKKEYSSASSRTPLITLKG--HKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYS 324 (391)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~i~~~~~~ 324 (391)
..++..+.+ |...|.+++|+|++ .|++|+.||.|++||+++++++..+. ++.+|.+++|+
T Consensus 202 ---------------~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~ 266 (437)
T 3gre_A 202 ---------------LERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVC 266 (437)
T ss_dssp ---------------CCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEEC
T ss_pred ---------------CeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEec
Confidence 345667776 88999999999655 58999999999999999999988874 45589999665
Q ss_pred ----CCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecc--------------------------ccCcEEEEEECCCCCC
Q psy2107 325 ----PLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS--------------------------HKEWVQSVRWSPIDPQ 374 (391)
Q Consensus 325 ----p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~--------------------------h~~~v~~~~~~~~~~~ 374 (391)
|++.+|++|+.||.|++||+++++ ....+.+ |...|++++|++ + .
T Consensus 267 ~~~s~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~-~-~ 341 (437)
T 3gre_A 267 QFYGKNSVIVVGGSSKTFLTIWNFVKGH---CQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSN-D-K 341 (437)
T ss_dssp TTTCTTEEEEEEESTTEEEEEEETTTTE---EEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEET-T-E
T ss_pred cccCCCccEEEEEcCCCcEEEEEcCCCc---EEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECC-c-e
Confidence 467799999999999999998765 3333332 666788899983 4 6
Q ss_pred EEEEeeCCCcEEEEecC
Q psy2107 375 LFVSASFDNSVKLWDLR 391 (391)
Q Consensus 375 ~l~s~~~dg~v~iwdlr 391 (391)
+|++|+.||.|++||++
T Consensus 342 ~l~s~~~d~~i~~wd~~ 358 (437)
T 3gre_A 342 ILLTDEATSSIVMFSLN 358 (437)
T ss_dssp EEEEEGGGTEEEEEETT
T ss_pred EEEecCCCCeEEEEECC
Confidence 89999999999999974
No 90
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=6.4e-33 Score=270.24 Aligned_cols=275 Identities=21% Similarity=0.360 Sum_probs=229.2
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR 143 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~ 143 (391)
...+|.+++..+++. ..++.+.+|...... ....+.+|...|++++|+ +++|++|+.||.|++||+
T Consensus 17 ~~i~~sp~~~~la~~----------~~~g~v~iwd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 17 KGIDFHPTEPWVLTT----------LYSGRVEIWNYETQV--EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (814)
T ss_dssp EEEEECSSSSEEEEE----------ETTSEEEEEETTTTE--EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred EEEEECCCCCEEEEE----------eCCCEEEEEECCCCc--eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 557899999887752 346788898754322 123455799999999998 679999999999999998
Q ss_pred -CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC-CCCEEEE
Q psy2107 144 -RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE-SRQQFAT 221 (391)
Q Consensus 144 -~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~s 221 (391)
++..+..+.+|.+.|++++| ++++.+|++++.||.|++||+.. .......+.+|...|.+++|+| +++.|++
T Consensus 85 ~~~~~~~~~~~~~~~v~~~~~---s~~~~~l~~~~~dg~i~vw~~~~---~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~ 158 (814)
T 3mkq_A 85 NTGEKVVDFEAHPDYIRSIAV---HPTKPYVLSGSDDLTVKLWNWEN---NWALEQTFEGHEHFVMCVAFNPKDPSTFAS 158 (814)
T ss_dssp TTCCEEEEEECCSSCEEEEEE---CSSSSEEEEEETTSEEEEEEGGG---TSEEEEEEECCSSCEEEEEEETTEEEEEEE
T ss_pred CCCcEEEEEecCCCCEEEEEE---eCCCCEEEEEcCCCEEEEEECCC---CceEEEEEcCCCCcEEEEEEEcCCCCEEEE
Confidence 66777788899999999999 77888999999999999999752 2356677889999999999999 8899999
Q ss_pred EeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC-ccCcccEEEecc--CC-eEEEEECCCe
Q psy2107 222 GGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG-HKEAISAVQWTA--VD-EIITSSWDHT 297 (391)
Q Consensus 222 g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~--~~-~l~s~~~dg~ 297 (391)
++.||.|++||+.++. ....+.. +...+.+++|++ ++ .+++++.||.
T Consensus 159 ~~~dg~v~vwd~~~~~-----------------------------~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~ 209 (814)
T 3mkq_A 159 GCLDRTVKVWSLGQST-----------------------------PNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT 209 (814)
T ss_dssp EETTSEEEEEETTCSS-----------------------------CSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSE
T ss_pred EeCCCeEEEEECCCCc-----------------------------ceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCE
Confidence 9999999999997633 3334443 448899999996 44 6999999999
Q ss_pred EEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEE
Q psy2107 298 LKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLF 376 (391)
Q Consensus 298 i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 376 (391)
|++||+.+++.+..+..+. .+.+++|+|+++++++|+.||.|++||+.+.. ....+..|...|.+++|+|++..++
T Consensus 210 i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~ 286 (814)
T 3mkq_A 210 IKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK---VEKTLNVGLERSWCIATHPTGRKNY 286 (814)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS---EEEEECCSSSSEEEEEECTTCGGGE
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc---EEEEeecCCCcEEEEEEccCCCceE
Confidence 9999999999999888664 89999999999999999999999999998766 7778888999999999999665544
Q ss_pred EEeeCCCcEEEEec
Q psy2107 377 VSASFDNSVKLWDL 390 (391)
Q Consensus 377 ~s~~~dg~v~iwdl 390 (391)
++++.|+.+.+|++
T Consensus 287 ~~~~~~~~~~~~~~ 300 (814)
T 3mkq_A 287 IASGFDNGFTVLSL 300 (814)
T ss_dssp EEEEETTEEEEEEC
T ss_pred EEEEeCCCEEEEEc
Confidence 55555778888875
No 91
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=8.1e-33 Score=281.07 Aligned_cols=308 Identities=20% Similarity=0.324 Sum_probs=235.1
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR 143 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~ 143 (391)
....|.++|+++++ .+.++.+.+|....... ...+.+|.+.|++++|+ ++++++|+.||+|++||+
T Consensus 619 ~~~~~s~~~~~l~s----------~~~d~~i~vw~~~~~~~--~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~ 686 (1249)
T 3sfz_A 619 YHACFSQDGQRIAS----------CGADKTLQVFKAETGEK--LLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDS 686 (1249)
T ss_dssp EEEEECTTSSEEEE----------EETTSCEEEEETTTCCE--EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEEEECCCCCEEEE----------EeCCCeEEEEECCCCCE--EEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEEC
Confidence 34578888887765 24678899997654332 34456899999999998 669999999999999999
Q ss_pred -CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEE
Q psy2107 144 -RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATG 222 (391)
Q Consensus 144 -~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg 222 (391)
++..+..+.+|...|.+++|+|. .++.++++|+.||.|++||++ ...++..+.+|...|.+++|+|++++|++|
T Consensus 687 ~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~l~sg~~d~~v~vwd~~----~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~ 761 (1249)
T 3sfz_A 687 ATGKLVHTYDEHSEQVNCCHFTNK-SNHLLLATGSNDFFLKLWDLN----QKECRNTMFGHTNSVNHCRFSPDDELLASC 761 (1249)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSS-SSCCEEEEEETTSCEEEEETT----SSSEEEEECCCSSCEEEEEECSSTTEEEEE
T ss_pred CCCceEEEEcCCCCcEEEEEEecC-CCceEEEEEeCCCeEEEEECC----CcchhheecCCCCCEEEEEEecCCCEEEEE
Confidence 67778888999999999999552 256689999999999999965 345778888999999999999999999999
Q ss_pred eCCCcEEEEECCCCCCCCCCC-------------------------CCCCCCccccccccccccCCCCCceeeec-CccC
Q psy2107 223 GWDCLLKIWSADISKERGDPS-------------------------ENGDEGTTSKKRKKEYSSASSRTPLITLK-GHKE 276 (391)
Q Consensus 223 ~~dg~i~iwd~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 276 (391)
+.||.|++||++++....... +.+.............++.........+. +|..
T Consensus 762 s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 841 (1249)
T 3sfz_A 762 SADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHS 841 (1249)
T ss_dssp ESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSS
T ss_pred ECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCC
Confidence 999999999998764321110 00000001111111222333333444443 7899
Q ss_pred cccEEEeccC-CeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCC-------
Q psy2107 277 AISAVQWTAV-DEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVK------- 347 (391)
Q Consensus 277 ~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~------- 347 (391)
.|.+++|+|+ ..+++++.|+.|++||+.++.....+..|. .|.+++|+|++++|++++.||.|++|++...
T Consensus 842 ~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~ 921 (1249)
T 3sfz_A 842 TIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIV 921 (1249)
T ss_dssp CCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSS
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeec
Confidence 9999999965 458899999999999999999888887765 7889999999999999999998988874310
Q ss_pred ---------------------------------------------------------------------CcceEEEEecc
Q psy2107 348 ---------------------------------------------------------------------EGAIVKSTFSS 358 (391)
Q Consensus 348 ---------------------------------------------------------------------~~~~~~~~~~~ 358 (391)
........+.+
T Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~ 1001 (1249)
T 3sfz_A 922 LKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVG 1001 (1249)
T ss_dssp EEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCC
T ss_pred ccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeeccc
Confidence 00112345567
Q ss_pred ccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 359 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 359 h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
|...|++++|+| ++.++++++.||.|++||++
T Consensus 1002 h~~~v~~l~~s~-dg~~l~s~~~dg~i~vwd~~ 1033 (1249)
T 3sfz_A 1002 HKKAVRHIQFTA-DGKTLISSSEDSVIQVWNWQ 1033 (1249)
T ss_dssp CSSCCCCEEECS-SSSCEEEECSSSBEEEEETT
T ss_pred CCCceEEEEECC-CCCEEEEEcCCCEEEEEECC
Confidence 999999999999 56679999999999999974
No 92
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=5.7e-33 Score=242.93 Aligned_cols=269 Identities=14% Similarity=0.124 Sum_probs=219.5
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCC-CCCcccCCCCcEEEEEec--CC-EEEEEECCCeEEEE
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTP-SPLDCILHDDWVSAIDFH--ND-WILTGCYDHSVHIW 141 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~V~~~~~~--~~-~l~t~~~dg~i~iw 141 (391)
....|.++++++.+ .+.++.+.+|........ ......+|...|++++|+ ++ +|++|+.||.|++|
T Consensus 15 ~~~~~s~~~~~l~~----------~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 15 SDIKIIPSKSLLLI----------TSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp EEEEEEGGGTEEEE----------EETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred EEEEEcCCCCEEEE----------EcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 45688888876654 235788999988754411 134455899999999997 77 99999999999999
Q ss_pred cC-CCceEEeccC--CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCc-----eeEEEEEecCCCCeEEEEEc
Q psy2107 142 TR-RGEHKLNIPG--HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNS-----IECIHVCRGHERGLETVTVS 213 (391)
Q Consensus 142 d~-~~~~~~~~~~--~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~-----~~~~~~~~~~~~~v~~l~~~ 213 (391)
|+ .......+.+ |...|.+++| ++ +.++++++.||.|++||++..... ..++..+. |...|.+++|+
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~l~~---~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~ 159 (342)
T 1yfq_A 85 DLIGSPSFQALTNNEANLGICRICK---YG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTN 159 (342)
T ss_dssp CSSSSSSEEECBSCCCCSCEEEEEE---ET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEEC
T ss_pred EeccCCceEeccccCCCCceEEEEe---CC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEec
Confidence 99 8888888888 9999999999 45 779999999999999997631000 22233333 78899999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCC-CCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-C-CeEE
Q psy2107 214 ESRQQFATGGWDCLLKIWSADI-SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-V-DEII 290 (391)
Q Consensus 214 ~~~~~l~sg~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~l~ 290 (391)
|++ +++++.|+.|++||+++ ... ........|...+.+++|+| + ..++
T Consensus 160 ~~~--l~~~~~d~~i~i~d~~~~~~~---------------------------~~~~~~~~~~~~i~~i~~~~~~~~~l~ 210 (342)
T 1yfq_A 160 SSR--LIVGMNNSQVQWFRLPLCEDD---------------------------NGTIEESGLKYQIRDVALLPKEQEGYA 210 (342)
T ss_dssp SSE--EEEEESTTEEEEEESSCCTTC---------------------------CCEEEECSCSSCEEEEEECSGGGCEEE
T ss_pred CCc--EEEEeCCCeEEEEECCccccc---------------------------cceeeecCCCCceeEEEECCCCCCEEE
Confidence 987 99999999999999975 332 12334456788999999997 4 5699
Q ss_pred EEECCCeEEEEecccC------ceeEEEECCe----------eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEE
Q psy2107 291 TSSWDHTLKIWDAELG------GMKSEIVGNK----------SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKS 354 (391)
Q Consensus 291 s~~~dg~i~iwd~~~~------~~~~~~~~~~----------~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 354 (391)
+++.||.|++|++... +....+..+. .+.+++|+|++++|++|+.||.|++||+.+++ .+.
T Consensus 211 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~---~~~ 287 (342)
T 1yfq_A 211 CSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK---KIK 287 (342)
T ss_dssp EEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE---EEE
T ss_pred EEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHh---Hhh
Confidence 9999999999999887 7777887653 79999999999999999999999999998765 677
Q ss_pred Eeccc-cCcEEEEEECCCCCCEEEEeeCCCc
Q psy2107 355 TFSSH-KEWVQSVRWSPIDPQLFVSASFDNS 384 (391)
Q Consensus 355 ~~~~h-~~~v~~~~~~~~~~~~l~s~~~dg~ 384 (391)
.+.+| ...|++++ | ++.+|++++.||.
T Consensus 288 ~~~~~h~~~v~~~~--~-~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 288 NFAKFNEDSVVKIA--C-SDNILCLATSDDT 315 (342)
T ss_dssp ECCCCSSSEEEEEE--E-CSSEEEEEEECTH
T ss_pred hhhcccCCCceEec--C-CCCeEEEEecCCc
Confidence 88888 99999999 7 6678999999998
No 93
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.2e-33 Score=250.13 Aligned_cols=239 Identities=19% Similarity=0.293 Sum_probs=193.0
Q ss_pred EEEEecCCE---EEEEECCCeEEEEcCCC-----ceEEeccCCCCCeeEEEEEecCC-CCeEEEEEeCCCcEEEEeecCC
Q psy2107 120 SAIDFHNDW---ILTGCYDHSVHIWTRRG-----EHKLNIPGHGGPVKGVAWLYNDG-KDAAFISVSTDQTAMIWEWKVE 190 (391)
Q Consensus 120 ~~~~~~~~~---l~t~~~dg~i~iwd~~~-----~~~~~~~~~~~~v~~l~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~ 190 (391)
..++++++. +++++.||.|+||++.. .....+.+|.+.|++++| ++ ++.+|++|+.||.|++||+...
T Consensus 38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~---~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAW---CPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp CSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEE---CTTCTTEEEEEETTSEEEEEECCTT
T ss_pred CcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEe---CCCCCCEEEEEeCCCeEEEEEccCC
Confidence 356777664 34578899999999843 234456789999999999 66 7889999999999999997633
Q ss_pred CCc---eeEEEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107 191 SNS---IECIHVCRGHERGLETVTVSESR-QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT 266 (391)
Q Consensus 191 ~~~---~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (391)
... ...+..+.+|...|.+++|+|++ ++|++|+.||.|++||++++ .
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~-----------------------------~ 165 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG-----------------------------A 165 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT-----------------------------E
T ss_pred CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC-----------------------------C
Confidence 211 14567788999999999999998 69999999999999999763 3
Q ss_pred ceeee--cCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEE-ECCe--eeEEEEECCCCCEEEEe---eCCC
Q psy2107 267 PLITL--KGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEI-VGNK--SFFDVHYSPLSKLVITA---SADK 337 (391)
Q Consensus 267 ~~~~~--~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~--~i~~~~~~p~~~~l~~g---~~dg 337 (391)
.+..+ ..|...|.+++|++++ .|++++.|+.|++||+++++.+..+ ..+. .+.+++|+|++++|++| +.|+
T Consensus 166 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~ 245 (402)
T 2aq5_A 166 AVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSER 245 (402)
T ss_dssp EEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCE
T ss_pred ccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCc
Confidence 56666 7899999999999655 5999999999999999999998888 4554 37999999999999999 7899
Q ss_pred cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 338 QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 338 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
.|++||++......... ...|...|.+++|+|++..++++++.||.|++||++
T Consensus 246 ~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~ 298 (402)
T 2aq5_A 246 QVALWDTKHLEEPLSLQ-ELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEIT 298 (402)
T ss_dssp EEEEEETTBCSSCSEEE-ECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEEC
T ss_pred eEEEEcCccccCCceEE-eccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEec
Confidence 99999998765332222 235778899999999555444566689999999974
No 94
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-33 Score=274.01 Aligned_cols=303 Identities=15% Similarity=0.110 Sum_probs=211.6
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR 143 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~ 143 (391)
....|.+ |+++.+ .+.++.+++|...... ....+.|.+.|++++|+ ++++++|+.||+|++||+
T Consensus 62 ~~l~fsp-g~~L~S----------~s~D~~v~lWd~~~~~---~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~ 127 (902)
T 2oaj_A 62 KEMRFVK-GIYLVV----------INAKDTVYVLSLYSQK---VLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDI 127 (902)
T ss_dssp EEEEEET-TTEEEE----------EETTCEEEEEETTTCS---EEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEET
T ss_pred EEEEEcC-CCEEEE----------EECcCeEEEEECCCCc---EEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEEC
Confidence 4468888 665544 3468899999864322 22333477899999998 679999999999999999
Q ss_pred CCceEE------------eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC--------
Q psy2107 144 RGEHKL------------NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH-------- 203 (391)
Q Consensus 144 ~~~~~~------------~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-------- 203 (391)
....+. .+.+|.++|.+++|+|. ++..+++|+.||.| +||++ ...++..+..|
T Consensus 128 ~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~--~~~~l~~g~~dg~v-lWd~~----~~~~~~~~~~~~~~g~~~~ 200 (902)
T 2oaj_A 128 DRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR--DIGTVLISYEYVTL-TYSLV----ENEIKQSFIYELPPFAPGG 200 (902)
T ss_dssp TTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETT--EEEEEEEECSSCEE-EEETT----TTEEEEEECCCBCTTCCCS
T ss_pred CCCccccceeccccccccccccCCCCeEEEEEccC--CCCEEEEEeCCCcE-EEECC----CCceEEEEecccCCcCCCc
Confidence 665442 24679999999999553 45789999999999 99965 33555666555
Q ss_pred ----------CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCC--C-----CC-----------CC---------
Q psy2107 204 ----------ERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGD--P-----SE-----------NG--------- 246 (391)
Q Consensus 204 ----------~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~--~-----~~-----------~~--------- 246 (391)
...|.+++|+|++++|++|+.||.|++||+++++.... . .. ..
T Consensus 201 ~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~ 280 (902)
T 2oaj_A 201 DFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWM 280 (902)
T ss_dssp TTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEE
T ss_pred ccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEE
Confidence 57899999999999999999999999999987654210 0 00 00
Q ss_pred ---CC-----Cccc-cc------ccccc----------------------------------------------------
Q psy2107 247 ---DE-----GTTS-KK------RKKEY---------------------------------------------------- 259 (391)
Q Consensus 247 ---~~-----~~~~-~~------~~~~~---------------------------------------------------- 259 (391)
.+ .... .. ....+
T Consensus 281 ~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g 360 (902)
T 2oaj_A 281 CENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAG 360 (902)
T ss_dssp ECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHH
T ss_pred ecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCC
Confidence 00 0000 00 00000
Q ss_pred ------------------ccCCCCCcee-----------------------------------------eecCccCcccE
Q psy2107 260 ------------------SSASSRTPLI-----------------------------------------TLKGHKEAISA 280 (391)
Q Consensus 260 ------------------~~~~~~~~~~-----------------------------------------~~~~~~~~v~~ 280 (391)
++.....+.. .+.+|...+.+
T Consensus 361 ~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~s 440 (902)
T 2oaj_A 361 CHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQ 440 (902)
T ss_dssp TBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCC
T ss_pred CCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCc
Confidence 0000000000 01222333334
Q ss_pred EEeccCC-eEEEEECCCeEEEEecccCcee----EEE--------ECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC
Q psy2107 281 VQWTAVD-EIITSSWDHTLKIWDAELGGMK----SEI--------VGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK 347 (391)
Q Consensus 281 ~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~----~~~--------~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~ 347 (391)
++|+|++ .|++|+.|++|++||+.++... ... .+...|.+++|+|++++||+|+.||+|+|||+...
T Consensus 441 v~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~ 520 (902)
T 2oaj_A 441 KLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVN 520 (902)
T ss_dssp CCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEEC
T ss_pred ccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCc
Confidence 4455544 5999999999999999887532 111 12348999999999999999999999999998754
Q ss_pred Cc------------------------------------------ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcE
Q psy2107 348 EG------------------------------------------AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSV 385 (391)
Q Consensus 348 ~~------------------------------------------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v 385 (391)
+. ..++..+.+|.+.|++++|+| ++ +||+|+.|++|
T Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSp-dG-~lAsgs~D~tv 598 (902)
T 2oaj_A 521 QFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSN-IG-FVGIAYAAGSL 598 (902)
T ss_dssp CC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECB-TS-EEEEEETTSEE
T ss_pred cccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecC-Cc-EEEEEeCCCcE
Confidence 21 124667888999999999999 55 89999999999
Q ss_pred EEEecC
Q psy2107 386 KLWDLR 391 (391)
Q Consensus 386 ~iwdlr 391 (391)
+|||++
T Consensus 599 ~lwd~~ 604 (902)
T 2oaj_A 599 MLIDRR 604 (902)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 999974
No 95
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.9e-32 Score=257.22 Aligned_cols=238 Identities=17% Similarity=0.329 Sum_probs=208.1
Q ss_pred CCCCcEEEEEec--CCEEEEEECCCeEEEEcCC-C----ceEEeccCCCCC-eeEEEEEecCC--CCeEEEEEeCCCcEE
Q psy2107 114 LHDDWVSAIDFH--NDWILTGCYDHSVHIWTRR-G----EHKLNIPGHGGP-VKGVAWLYNDG--KDAAFISVSTDQTAM 183 (391)
Q Consensus 114 ~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~-~----~~~~~~~~~~~~-v~~l~~~~~~~--~~~~l~s~~~dg~v~ 183 (391)
.|.+.|++++|+ +++|++++ ++.|++||+. + .....+.+|... |.+++| ++ ++.+|++|+.||.|+
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~---sp~~~~~~l~s~~~dg~v~ 91 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKF---SPIKGSQYLCSGDESGKVI 91 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEE---CSSTTCCEEEEEETTSEEE
T ss_pred CccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEE---CcCCCCCEEEEecCCCEEE
Confidence 588999999998 66888888 8899999994 5 578889999999 999999 77 889999999999999
Q ss_pred EEeecCCCC----ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC----CcEEEEECCCCCCCCCCCCCCCCCcccccc
Q psy2107 184 IWEWKVESN----SIECIHVCRGHERGLETVTVSESRQQFATGGWD----CLLKIWSADISKERGDPSENGDEGTTSKKR 255 (391)
Q Consensus 184 iwd~~~~~~----~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 255 (391)
+||+..... ....+..+..|...|.+++|+|++++|++++.+ +.|++||.
T Consensus 92 vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~---------------------- 149 (615)
T 1pgu_A 92 VWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS---------------------- 149 (615)
T ss_dssp EEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT----------------------
T ss_pred EEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC----------------------
Confidence 999742100 346677888899999999999999999999988 68888884
Q ss_pred ccccccCCCCCceeeecCccCcccEEEeccCC--eEEEEECCCeEEEEecccCceeEEEECCe----eeEEEEECCC-CC
Q psy2107 256 KKEYSSASSRTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKSEIVGNK----SFFDVHYSPL-SK 328 (391)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~i~~~~~~p~-~~ 328 (391)
...+..+.+|...|.+++|+|++ .+++++.|+.|++||+.+++.+..+..+. .+.+++|+|+ ++
T Consensus 150 ---------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 220 (615)
T 1pgu_A 150 ---------GNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGE 220 (615)
T ss_dssp ---------CCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCC
T ss_pred ---------CCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCC
Confidence 23667788999999999999766 69999999999999999999999888654 5999999999 99
Q ss_pred EEEEeeCCCcEEEEcCCCCCcceEEEEe-c---cccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 329 LVITASADKQIRLYDPKVKEGAIVKSTF-S---SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 329 ~l~~g~~dg~i~iwd~~~~~~~~~~~~~-~---~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+|++++.||.|++||+++++ ....+ . +|...|.+++|+ ++.+|++++.||.|++||++
T Consensus 221 ~l~~~~~dg~i~vwd~~~~~---~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~ 282 (615)
T 1pgu_A 221 FVITVGSDRKISCFDGKSGE---FLKYIEDDQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVT 282 (615)
T ss_dssp EEEEEETTCCEEEEETTTCC---EEEECCBTTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETT
T ss_pred EEEEEeCCCeEEEEECCCCC---EeEEecccccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECC
Confidence 99999999999999998766 66677 5 899999999999 55689999999999999974
No 96
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-32 Score=266.45 Aligned_cols=248 Identities=14% Similarity=0.172 Sum_probs=195.0
Q ss_pred ccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC
Q psy2107 112 CILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV 189 (391)
Q Consensus 112 ~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 189 (391)
..+|.+.|++++|+ +++||+|+.||+|+||+..+........|..+|.+++|+ + +.+|++++.|++|++||+.
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fs---p-g~~L~S~s~D~~v~lWd~~- 87 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFV---K-GIYLVVINAKDTVYVLSLY- 87 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEE---T-TTEEEEEETTCEEEEEETT-
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEc---C-CCEEEEEECcCeEEEEECC-
Confidence 34799999999998 669999999999999999766555555688999999994 4 5689999999999999965
Q ss_pred CCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107 190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI 269 (391)
Q Consensus 190 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (391)
..+++..+. |...|++++|+|++++|++|+.||.|++||+++++... ...... .....
T Consensus 88 ---~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~-------------~~i~~~-----~~~~~ 145 (902)
T 2oaj_A 88 ---SQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSS-------------FKLDNL-----QKSSF 145 (902)
T ss_dssp ---TCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEE-------------EEECCH-----HHHHT
T ss_pred ---CCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcccc-------------ceeccc-----ccccc
Confidence 234555665 67899999999999999999999999999997643210 000000 00002
Q ss_pred eecCccCcccEEEeccC--CeEEEEECCCeEEEEecccCceeEEEECC-------------------eeeEEEEECCCCC
Q psy2107 270 TLKGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAELGGMKSEIVGN-------------------KSFFDVHYSPLSK 328 (391)
Q Consensus 270 ~~~~~~~~v~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------------------~~i~~~~~~p~~~ 328 (391)
.+.+|..+|.+++|+|. +.+++|+.||.| +||+++++.+..+..+ ..|.+++|+|+|+
T Consensus 146 ~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~ 224 (902)
T 2oaj_A 146 FPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL 224 (902)
T ss_dssp CSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS
T ss_pred ccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC
Confidence 34679999999999975 469999999999 9999999998888765 5799999999999
Q ss_pred EEEEeeCCCcEEEEcCCCCCcceEEE--Ee---cc-------------ccCcEEEEEEC----CCCCCEEEEeeCC----
Q psy2107 329 LVITASADKQIRLYDPKVKEGAIVKS--TF---SS-------------HKEWVQSVRWS----PIDPQLFVSASFD---- 382 (391)
Q Consensus 329 ~l~~g~~dg~i~iwd~~~~~~~~~~~--~~---~~-------------h~~~v~~~~~~----~~~~~~l~s~~~d---- 382 (391)
+|++|+.||.|++||+++++ ++. .+ .. |...|++++|+ |+++.+|++|+.|
T Consensus 225 ~lasgs~Dg~i~lWd~~~g~---~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~ 301 (902)
T 2oaj_A 225 HIITIHEDNSLVFWDANSGH---MIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGD 301 (902)
T ss_dssp EEEEEETTCCEEEEETTTCC---EEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSS
T ss_pred EEEEEECCCeEEEEECCCCc---EEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCC
Confidence 99999999999999998765 332 22 11 35579999995 4334678888776
Q ss_pred -CcEEEEec
Q psy2107 383 -NSVKLWDL 390 (391)
Q Consensus 383 -g~v~iwdl 390 (391)
..+.+|++
T Consensus 302 ~~~v~~~~~ 310 (902)
T 2oaj_A 302 NQSLTMIDL 310 (902)
T ss_dssp CCCEEEEEE
T ss_pred CceEEEEec
Confidence 37888874
No 97
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.9e-32 Score=257.25 Aligned_cols=270 Identities=15% Similarity=0.187 Sum_probs=226.2
Q ss_pred ceeeEEe--CCeEehhhHHHHHHHcCCCccceEEEEEEecc------CCCCCCcccCCCCcEEEEEec--CCEEEEEECC
Q psy2107 66 IQFDFLI--AGELLRTSVTSFLESKGISSENVIDVEYLEST------PTPSPLDCILHDDWVSAIDFH--NDWILTGCYD 135 (391)
Q Consensus 66 ~~~~f~~--~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~d 135 (391)
....|.+ +++++++ .+.++.+.+|..... .......+..|...|.+++|+ +++|++++.+
T Consensus 68 ~~~~~sp~~~~~~l~s----------~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~ 137 (615)
T 1pgu_A 68 TTVKFSPIKGSQYLCS----------GDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEG 137 (615)
T ss_dssp EEEEECSSTTCCEEEE----------EETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECC
T ss_pred EEEEECcCCCCCEEEE----------ecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccC
Confidence 4578999 9988775 235788999988533 222234455699999999998 6699999988
Q ss_pred ----CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCe-EEEEEeCCCcEEEEeecCCCCceeEEEEEecCCC---Ce
Q psy2107 136 ----HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDA-AFISVSTDQTAMIWEWKVESNSIECIHVCRGHER---GL 207 (391)
Q Consensus 136 ----g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~---~v 207 (391)
+.|++|| .+.....+.+|...|.+++| ++++. .+++++.||.|++||+. ..+.+..+.+|.. .|
T Consensus 138 ~~~~~~v~~~d-~~~~~~~~~~~~~~v~~~~~---~~~~~~~l~~~~~d~~v~vwd~~----~~~~~~~~~~~~~~~~~v 209 (615)
T 1pgu_A 138 RDNFGVFISWD-SGNSLGEVSGHSQRINACHL---KQSRPMRSMTVGDDGSVVFYQGP----PFKFSASDRTHHKQGSFV 209 (615)
T ss_dssp SSCSEEEEETT-TCCEEEECCSCSSCEEEEEE---CSSSSCEEEEEETTTEEEEEETT----TBEEEEEECSSSCTTCCE
T ss_pred CCCccEEEEEE-CCCcceeeecCCccEEEEEE---CCCCCcEEEEEeCCCcEEEEeCC----CcceeeeecccCCCCceE
Confidence 7999999 66678888999999999999 66666 89999999999999954 4567888899999 99
Q ss_pred EEEEEcCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee-c---CccCcccEEE
Q psy2107 208 ETVTVSES-RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL-K---GHKEAISAVQ 282 (391)
Q Consensus 208 ~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~v~~~~ 282 (391)
.+++|+|+ +++|++++.||.|++||++++ +.+..+ . .|...|.+++
T Consensus 210 ~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-----------------------------~~~~~~~~~~~~~~~~v~~~~ 260 (615)
T 1pgu_A 210 RDVEFSPDSGEFVITVGSDRKISCFDGKSG-----------------------------EFLKYIEDDQEPVQGGIFALS 260 (615)
T ss_dssp EEEEECSTTCCEEEEEETTCCEEEEETTTC-----------------------------CEEEECCBTTBCCCSCEEEEE
T ss_pred EEEEECCCCCCEEEEEeCCCeEEEEECCCC-----------------------------CEeEEecccccccCCceEEEE
Confidence 99999999 999999999999999999763 345556 5 7999999999
Q ss_pred eccCCeEEEEECCCeEEEEecccCceeEEEECC-----eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec
Q psy2107 283 WTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN-----KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS 357 (391)
Q Consensus 283 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~ 357 (391)
|+++..+++++.|+.|++||+++++.+..+..+ ..+.++.|. +++++++|+.||.|++||+...+ ....+.
T Consensus 261 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~---~~~~~~ 336 (615)
T 1pgu_A 261 WLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDE---VLKTIS 336 (615)
T ss_dssp ESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEE---EEEEEC
T ss_pred EcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCc---EEEEEe
Confidence 994456999999999999999999999998876 467788885 89999999999999999987644 667888
Q ss_pred cccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 358 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 358 ~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+|...|++++| | + +++++.||.|++||++
T Consensus 337 ~~~~~v~~~~~-~-~---l~~~~~dg~i~~w~~~ 365 (615)
T 1pgu_A 337 GHNKGITALTV-N-P---LISGSYDGRIMEWSSS 365 (615)
T ss_dssp CCSSCEEEEET-T-T---TEEEETTSCEEETTTT
T ss_pred CCCCCEEEEEe-c-C---cEEECCCCeEEEEEch
Confidence 89999999999 8 3 7888888888888863
No 98
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.4e-32 Score=244.79 Aligned_cols=263 Identities=16% Similarity=0.128 Sum_probs=169.5
Q ss_pred CCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceE------EeccCCCCCeeEEEEEec-----CCCCeEEEEEeCCCc
Q psy2107 115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHK------LNIPGHGGPVKGVAWLYN-----DGKDAAFISVSTDQT 181 (391)
Q Consensus 115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~------~~~~~~~~~v~~l~~~~~-----~~~~~~l~s~~~dg~ 181 (391)
|...+....+. +.++++++.|++|+|||.+.... ..+.+|.+.|++++|+|. ..++.+|++|+.|++
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t 167 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT 167 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCe
Confidence 44444443443 55899999999999999854322 246799999999999873 236889999999999
Q ss_pred EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccc
Q psy2107 182 AMIWEWKVESNSIECIHVCRGHERGLETVTVSESR-QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYS 260 (391)
Q Consensus 182 v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (391)
|++||+. ...++..+..|...|.+++|+|++ .+|++|+.||.|++||+++++............... ....
T Consensus 168 v~~Wd~~----~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~----~~s~ 239 (393)
T 4gq1_A 168 LIIWRLT----DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPW----LLTL 239 (393)
T ss_dssp EEEEEEE----TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCC----SEEE
T ss_pred EEEEECC----CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccce----EEec
Confidence 9999975 234566667789999999999987 479999999999999998866543221111000000 0000
Q ss_pred cCCCCCceeeecCccCcccEEEec-cC-CeEEEEECCCeEEEEecccCceeEEEECCe-ee------------------E
Q psy2107 261 SASSRTPLITLKGHKEAISAVQWT-AV-DEIITSSWDHTLKIWDAELGGMKSEIVGNK-SF------------------F 319 (391)
Q Consensus 261 ~~~~~~~~~~~~~~~~~v~~~~~~-~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i------------------~ 319 (391)
............+|...+.++.|. ++ ..+++++.|+++++||+..++....+..+. .+ .
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (393)
T 4gq1_A 240 NTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLL 319 (393)
T ss_dssp ESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSS
T ss_pred ccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcce
Confidence 011111222345788999999997 44 569999999999999998877655544321 11 2
Q ss_pred EEEECC--CCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 320 DVHYSP--LSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 320 ~~~~~p--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
...++| ++.++++|+.||.|++||+..+. ......+|..+|++++|+| ++++||+++.|| +.+|.|
T Consensus 320 ~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~---~~~~~~~~~~~V~svafsp-dG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 320 GACPHPRYMDYFATAHSQHGLIQLINTYEKD---SNSIPIQLGMPIVDFCWHQ-DGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp CCEECSSCTTEEEEEETTTTEEEEEETTCTT---CCEEEEECSSCEEEEEECT-TSSEEEEEESSE-EEEEEE
T ss_pred eEEEccCCCCEEEEEECCCCEEEEEECCCCc---EEEEecCCCCcEEEEEEcC-CCCEEEEEeCCC-eEEEEE
Confidence 223333 34467788899999999998766 4455667889999999999 667899998766 555543
No 99
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.1e-32 Score=240.55 Aligned_cols=236 Identities=19% Similarity=0.336 Sum_probs=194.4
Q ss_pred CCCC--cEEEEEecCCEEEEEECCCeEEEEcCC-CceEEecc-CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC
Q psy2107 114 LHDD--WVSAIDFHNDWILTGCYDHSVHIWTRR-GEHKLNIP-GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV 189 (391)
Q Consensus 114 ~h~~--~V~~~~~~~~~l~t~~~dg~i~iwd~~-~~~~~~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 189 (391)
+|.+ .+.+++|+++.+++++.||.|++||+. +.....+. .|...|.+++| ++++.+|++|+.||.|++||+.
T Consensus 89 ~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~---s~~~~~l~~~~~dg~i~iwd~~- 164 (401)
T 4aez_A 89 GIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKW---SHDGSFLSVGLGNGLVDIYDVE- 164 (401)
T ss_dssp TCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEE---CTTSSEEEEEETTSCEEEEETT-
T ss_pred CCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEE---CCCCCEEEEECCCCeEEEEECc-
Confidence 4444 356688888888999999999999994 44444444 38899999999 7789999999999999999964
Q ss_pred CCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107 190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI 269 (391)
Q Consensus 190 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (391)
....+..+.+|...|.+++|+ +++|++|+.||.|++||++.. .....
T Consensus 165 ---~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~----------------------------~~~~~ 211 (401)
T 4aez_A 165 ---SQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIA----------------------------NHQIG 211 (401)
T ss_dssp ---TCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSS----------------------------SCEEE
T ss_pred ---CCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccC----------------------------cceee
Confidence 345677888999999999994 569999999999999999742 23567
Q ss_pred eecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCC-EEEEee--CCCcEEEEcC
Q psy2107 270 TLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSK-LVITAS--ADKQIRLYDP 344 (391)
Q Consensus 270 ~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~-~l~~g~--~dg~i~iwd~ 344 (391)
.+.+|...|.+++|++++ .+++++.|+.|++||+++++....+..+. .+.+++|+|++. ++++|+ .|+.|++||+
T Consensus 212 ~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~ 291 (401)
T 4aez_A 212 TLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNA 291 (401)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEET
T ss_pred EEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEEC
Confidence 788999999999999654 69999999999999999999988887554 899999999765 566654 7999999999
Q ss_pred CCCCcceEEEEeccccCcEEEEEECCCCCCEEEE--eeCCCcEEEEecC
Q psy2107 345 KVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVS--ASFDNSVKLWDLR 391 (391)
Q Consensus 345 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s--~~~dg~v~iwdlr 391 (391)
+++. ....+. |...|.+++|+| ++.++++ |+.||.|++||++
T Consensus 292 ~~~~---~~~~~~-~~~~v~~~~~s~-~~~~l~~~~g~~dg~i~v~~~~ 335 (401)
T 4aez_A 292 ATGA---RVNTVD-AGSQVTSLIWSP-HSKEIMSTHGFPDNNLSIWSYS 335 (401)
T ss_dssp TTCC---EEEEEE-CSSCEEEEEECS-SSSEEEEEECTTTCEEEEEEEE
T ss_pred CCCC---EEEEEe-CCCcEEEEEECC-CCCeEEEEeecCCCcEEEEecC
Confidence 8766 555554 667899999999 5566777 4489999999963
No 100
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-31 Score=240.88 Aligned_cols=243 Identities=15% Similarity=0.047 Sum_probs=194.3
Q ss_pred CCCCcEEEEEec--CCEE-EEEECCCeEEEEcCC--C-ceEEecc--CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107 114 LHDDWVSAIDFH--NDWI-LTGCYDHSVHIWTRR--G-EHKLNIP--GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW 185 (391)
Q Consensus 114 ~h~~~V~~~~~~--~~~l-~t~~~dg~i~iwd~~--~-~~~~~~~--~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw 185 (391)
+|.+.|++++|+ +++| ++|+.||.|+|||+. . ..+..+. .|...|.+++| ++++.+|++|+.||.+++|
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~---sp~~~~l~~~~~~g~v~~~ 176 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISI---AEDDTTVIIADKFGDVYSI 176 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEE---CTTSSEEEEEETTSEEEEE
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEE---cCCCCEEEEEeCCCcEEEE
Confidence 577789999998 5575 899999999999986 3 4444444 67889999999 7789999999999999999
Q ss_pred eecCCCCceeEEEEEecCCCCeEEEEEcCC---CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107 186 EWKVESNSIECIHVCRGHERGLETVTVSES---RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA 262 (391)
Q Consensus 186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~---~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (391)
++............+.+|...|.+++|+|+ +++|++|+.|+.|++||+++++
T Consensus 177 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~------------------------- 231 (450)
T 2vdu_B 177 DINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF------------------------- 231 (450)
T ss_dssp ETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT-------------------------
T ss_pred ecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc-------------------------
Confidence 965332211133456789999999999999 9999999999999999997633
Q ss_pred CCCCceee-ecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECC--------------------------
Q psy2107 263 SSRTPLIT-LKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN-------------------------- 315 (391)
Q Consensus 263 ~~~~~~~~-~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------------------------- 315 (391)
.+.. +.+|...|.+++|+++..|++++.|+.|++||+++++.+..+..+
T Consensus 232 ----~~~~~~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (450)
T 2vdu_B 232 ----IVDKWLFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIE 307 (450)
T ss_dssp ----CEEEECCCCSSCEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBC
T ss_pred ----eeeeeecCCCCceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccce
Confidence 3444 568999999999994456999999999999999999988887632
Q ss_pred eeeEEEEECCCCCEEEEee-CCCcEEEEcC--CCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeC------CCcEE
Q psy2107 316 KSFFDVHYSPLSKLVITAS-ADKQIRLYDP--KVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF------DNSVK 386 (391)
Q Consensus 316 ~~i~~~~~~p~~~~l~~g~-~dg~i~iwd~--~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~------dg~v~ 386 (391)
..+.+++|+|++++|++++ .++.|++|++ ........+..+..| ..|.+++|+| ++.+++.++. +..|.
T Consensus 308 ~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~-~~~~v~~~~~~~~~~~~~~i~ 385 (450)
T 2vdu_B 308 FAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHN-DEFQVTLDNKESSGVQKNFAK 385 (450)
T ss_dssp CCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEET-TEEEEEECCTTCCSSCCCSEE
T ss_pred EEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecC-CcEEEEEecccCCCCCCcceE
Confidence 3688999999999999998 8999999999 443223466677777 8899999999 6544444443 45688
Q ss_pred EEec
Q psy2107 387 LWDL 390 (391)
Q Consensus 387 iwdl 390 (391)
+|.+
T Consensus 386 v~~~ 389 (450)
T 2vdu_B 386 FIEY 389 (450)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8875
No 101
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-32 Score=245.99 Aligned_cols=261 Identities=10% Similarity=0.036 Sum_probs=202.4
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEecCCEEEEEECCCeEEEEcCCC
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRG 145 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~~~ 145 (391)
...+|++||+++++ .+.+.+++ . . .. .....+|...|.+++|+++- .++.+.+|+.++
T Consensus 19 ~sv~~SpDG~~iAS----------as~D~TV~--d-~--~~--~~~l~gh~~~v~~V~FsPdg-----~~~~~~~~~~~~ 76 (588)
T 2j04_A 19 NNLTWARDGTLYLT----------TFPDISIG--Q-P--KY--AKDINCNSKNLFHVKEFPLE-----FENKLDFELAQQ 76 (588)
T ss_dssp CCEEECTTSCEEEE----------CSSSEEEE--E-E--CC--CSCCSSBGGGTEEEEEECCC-----CCCTTTTSCCCS
T ss_pred EEEEECCCCCEEEE----------EcCCceee--c-c--cc--cceecCCCccEEEEEECCCC-----CcceEEEEeCCC
Confidence 55799999999987 45677777 2 2 11 12335899999999998544 556666665544
Q ss_pred ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCC-----CeEEEEEcCCCCEEE
Q psy2107 146 EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHER-----GLETVTVSESRQQFA 220 (391)
Q Consensus 146 ~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-----~v~~l~~~~~~~~l~ 220 (391)
.....+ .|...|.+++| +|+|..||+++.||.|++||.. .++..+. |.. .|.+++|+|+|++|+
T Consensus 77 ~~~~~~-~~~~~V~~vaw---SPdG~~LAs~s~dg~V~iwd~~------~~l~~l~-~~~~~~~~sv~svafSPDG~~LA 145 (588)
T 2j04_A 77 NGLLNS-QPVCYPRVCKP---SPIDDWMAVLSNNGNVSVFKDN------KMLTNLD-SKGNLSSRTYHCFEWNPIESSIV 145 (588)
T ss_dssp SCSSTT-SCSCCEEEEEE---CSSSSCEEEEETTSCEEEEETT------EEEEECC-CSSCSTTTCEEEEEECSSSSCEE
T ss_pred ceEeec-CCCCcEEEEEE---CCCCCEEEEEeCCCcEEEEeCC------ceeeecc-CCCccccccEEEEEEcCCCCEEE
Confidence 444443 45889999999 8899999999999999999932 2566666 665 599999999999999
Q ss_pred EEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee----cCccCcccEEEeccCCeEEEEECCC
Q psy2107 221 TGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL----KGHKEAISAVQWTAVDEIITSSWDH 296 (391)
Q Consensus 221 sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~l~s~~~dg 296 (391)
+|+.||.|++||+.++.... ...-.+.++ .+|...|.+++|+|++ +++++.|+
T Consensus 146 sgs~DGtVkIWd~~~~~l~~----------------------~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~ 202 (588)
T 2j04_A 146 VGNEDGELQFFSIRKNSENT----------------------PEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNN 202 (588)
T ss_dssp EEETTSEEEEEECCCCTTTC----------------------CCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTC
T ss_pred EEcCCCEEEEEECCCCcccc----------------------ccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCC
Confidence 99999999999997643200 000024554 6788899999999989 99999999
Q ss_pred eEEEEecccCce---eEEEE-CC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEE--C
Q psy2107 297 TLKIWDAELGGM---KSEIV-GN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRW--S 369 (391)
Q Consensus 297 ~i~iwd~~~~~~---~~~~~-~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~--~ 369 (391)
+|++||+..+.. ..++. ++ ..|.+++|+ |+.||+++ ++.|++||+.... ......+|...|..++| +
T Consensus 203 tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~---~~~~~~gh~~~V~~va~~~s 276 (588)
T 2j04_A 203 SVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYS---ISSLKTGSLENFHIIPLNHE 276 (588)
T ss_dssp CEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTE---EEEEECSCCSCCCEEEETTC
T ss_pred eEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCe---EEEEEcCCCceEEEEEeeeC
Confidence 999999988774 34564 44 489999999 68999887 6999999987654 42333379999999999 9
Q ss_pred CCCCCEEEEeeCCCcEEEEec
Q psy2107 370 PIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 370 ~~~~~~l~s~~~dg~v~iwdl 390 (391)
| ++..+++++.||+ ++|.+
T Consensus 277 ~-d~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 277 K-ESTILLMSNKTSY-KVLLE 295 (588)
T ss_dssp S-SCEEEEECSSCEE-EEEES
T ss_pred C-CCCEEEEEcCCCC-EEEee
Confidence 9 6678999999999 99986
No 102
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-30 Score=235.04 Aligned_cols=238 Identities=11% Similarity=0.091 Sum_probs=187.1
Q ss_pred CcEEEEEec--CCEEEEEECCCeEEEEcC-CCc---eEEecc--------------------------------------
Q psy2107 117 DWVSAIDFH--NDWILTGCYDHSVHIWTR-RGE---HKLNIP-------------------------------------- 152 (391)
Q Consensus 117 ~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~---~~~~~~-------------------------------------- 152 (391)
.++.+++|+ |++|+++ .++.|++||+ +++ .+..+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 367788887 6655555 5789999998 555 333332
Q ss_pred ----------------CCCCCeeEEEEEecCCCCeEE-EEEeCCCcEEEEeecCCCCceeEEEEEe--cCCCCeEEEEEc
Q psy2107 153 ----------------GHGGPVKGVAWLYNDGKDAAF-ISVSTDQTAMIWEWKVESNSIECIHVCR--GHERGLETVTVS 213 (391)
Q Consensus 153 ----------------~~~~~v~~l~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~--~~~~~v~~l~~~ 213 (391)
+|.+.|.+++| ++++.+| ++|+.||.|++||+..... ..+..+. .|...|.+++|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~---s~d~~~l~~~~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~~~v~~~~~s 158 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRL---TSDESRLIACADSDKSLLVFDVDKTSK--NVLKLRKRFCFSKRPNAISIA 158 (450)
T ss_dssp ----------------CCCCCEEEEEE---CTTSSEEEEEEGGGTEEEEEEECSSSS--SCEEEEEEEECSSCEEEEEEC
T ss_pred ccccCccccCCCCCCCccCCceEEEEE---cCCCCEEEEEECCCCeEEEEECcCCCC--ceeeeeecccCCCCceEEEEc
Confidence 34447999999 7788885 8999999999999762122 2333333 577899999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC---C-eE
Q psy2107 214 ESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV---D-EI 289 (391)
Q Consensus 214 ~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~-~l 289 (391)
|++++|++|+.||.|++|++.++.... .+...+.+|...|.+++|+|+ + .|
T Consensus 159 p~~~~l~~~~~~g~v~~~~~~~~~~~~-------------------------~~~~~~~~h~~~v~~~~~sp~~~~~~~l 213 (450)
T 2vdu_B 159 EDDTTVIIADKFGDVYSIDINSIPEEK-------------------------FTQEPILGHVSMLTDVHLIKDSDGHQFI 213 (450)
T ss_dssp TTSSEEEEEETTSEEEEEETTSCCCSS-------------------------CCCCCSEECSSCEEEEEEEECTTSCEEE
T ss_pred CCCCEEEEEeCCCcEEEEecCCccccc-------------------------ccceeeecccCceEEEEEcCCCCCCcEE
Confidence 999999999999999999997644310 033456789999999999976 6 69
Q ss_pred EEEECCCeEEEEecccCceeEEEE-CC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec----------
Q psy2107 290 ITSSWDHTLKIWDAELGGMKSEIV-GN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS---------- 357 (391)
Q Consensus 290 ~s~~~dg~i~iwd~~~~~~~~~~~-~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~---------- 357 (391)
++++.|+.|++||+++++.+..+. .+ ..|.+++|+ ++++|++|+.|+.|++||+++++ ++..+.
T Consensus 214 ~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~---~~~~~~~~~~~~~~~~ 289 (450)
T 2vdu_B 214 ITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGK---NLSTFDYNSLIKPYLN 289 (450)
T ss_dssp EEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCC---EEEEEECHHHHGGGCC
T ss_pred EEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCc---Eeeeecchhhhhhhhh
Confidence 999999999999999998887744 34 589999999 99999999999999999998866 444443
Q ss_pred ---------------cccCcEEEEEECCCCCCEEEEee-CCCcEEEEec
Q psy2107 358 ---------------SHKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDL 390 (391)
Q Consensus 358 ---------------~h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwdl 390 (391)
.+...|.+++|+| ++.++++++ .|+.|+|||+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 290 DQHLAPPRFQNENNDIIEFAVSKIIKSK-NLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp TTSBC----------CBCCCEEEEEECS-SSSEEEEEETTCSEEEEEEE
T ss_pred hcccccccccccccccceEEEEEEEEeC-CCCEEEEEECCCCeEEEEEe
Confidence 2345799999999 566787777 8999999997
No 103
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-32 Score=237.01 Aligned_cols=226 Identities=10% Similarity=0.051 Sum_probs=171.3
Q ss_pred CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC-----CCceeEEEE
Q psy2107 126 NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE-----SNSIECIHV 199 (391)
Q Consensus 126 ~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-----~~~~~~~~~ 199 (391)
+.++++|+.||+|++||+ +++.+..+. ...|.++.| ++. +++++.|++|++|+.... ......+..
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~---~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~ 119 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGE---HPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLRE 119 (343)
T ss_dssp EEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCC---CCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred CCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeee---CCc---eEEecCCCeEEEEEccCceEEeecCCcceeEE
Confidence 679999999999999999 455555554 467888888 444 999999999999974311 012222333
Q ss_pred Ee-cCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee-cCcc
Q psy2107 200 CR-GHERGLETVTVSE--SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL-KGHK 275 (391)
Q Consensus 200 ~~-~~~~~v~~l~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 275 (391)
+. +|...|.+++|+| +++++++|+.||.|++||+++++ ..... ..|.
T Consensus 120 ~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~-----------------------------~~~~~~~~~~ 170 (343)
T 3lrv_A 120 IEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS-----------------------------QYIVHSAKSD 170 (343)
T ss_dssp EECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC-----------------------------EEEEECCCSS
T ss_pred eecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc-----------------------------EEEEEecCCC
Confidence 33 6778999999999 99999999999999999997633 33333 3456
Q ss_pred CcccEEEeccCCe-EEEEECCCeEEEEecccCcee-EEEEC--CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcce
Q psy2107 276 EAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMK-SEIVG--NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAI 351 (391)
Q Consensus 276 ~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~-~~~~~--~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~ 351 (391)
..+.+++|+|++. +++|+.||.|++||+++++.. ..+.. ..+|.+++|+|++.+|++++ ++.|++||++......
T Consensus 171 ~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~ 249 (343)
T 3lrv_A 171 VEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTL 249 (343)
T ss_dssp CCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCB
T ss_pred CceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcce
Confidence 6799999997654 778899999999999999887 67766 45999999999999999999 5599999998765322
Q ss_pred EEEEeccccCcEE--EEEECCCCCCEEEEeeC-CCcEEEEec
Q psy2107 352 VKSTFSSHKEWVQ--SVRWSPIDPQLFVSASF-DNSVKLWDL 390 (391)
Q Consensus 352 ~~~~~~~h~~~v~--~~~~~~~~~~~l~s~~~-dg~v~iwdl 390 (391)
.+..+..|...+. +++|+| ++.+|++++. |+.|+||++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 250 AYPTYTIPEFKTGTVTYDIDD-SGKNMIAYSNESNSLTIYKF 290 (343)
T ss_dssp SSCCCBC-----CCEEEEECT-TSSEEEEEETTTTEEEEEEE
T ss_pred eecccccccccccceEEEECC-CCCEEEEecCCCCcEEEEEE
Confidence 2222223444444 699999 6678999888 999999986
No 104
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.4e-32 Score=246.81 Aligned_cols=209 Identities=11% Similarity=0.149 Sum_probs=166.3
Q ss_pred eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcE
Q psy2107 150 NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLL 228 (391)
Q Consensus 150 ~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i 228 (391)
...+|...|++|+|+|. +..+||+|+.||.|++||+. .........+.+|.+.|++|+|+| ++++|++|+.||.|
T Consensus 114 ~~~~~~~~V~~l~~~P~--~~~~lasGs~dg~i~lWd~~--~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v 189 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPT--HPSTVAVGSKGGDIMLWNFG--IKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTT 189 (435)
T ss_dssp EEEECSSCEEEEEECSS--CTTCEEEEETTSCEEEECSS--CCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCE
T ss_pred cCCCCCCCEEEEEEeCC--CCCEEEEEeCCCEEEEEECC--CCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEE
Confidence 34468889999999553 55689999999999999965 334455666778999999999998 68999999999999
Q ss_pred EEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEECCCeEEEEecccCc
Q psy2107 229 KIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSSWDHTLKIWDAELGG 307 (391)
Q Consensus 229 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~ 307 (391)
++||+++... ........+...+.+++|+++ ..|++|+.||.|++||++. +
T Consensus 190 ~iwd~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~ 241 (435)
T 4e54_B 190 RLQDFKGNIL---------------------------RVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-K 241 (435)
T ss_dssp EEEETTSCEE---------------------------EEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-C
T ss_pred EEeeccCCce---------------------------eEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-c
Confidence 9999965221 111122234556789999965 4688999999999999874 4
Q ss_pred eeEEEECC-eeeEEEEECCCCC-EEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcE
Q psy2107 308 MKSEIVGN-KSFFDVHYSPLSK-LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSV 385 (391)
Q Consensus 308 ~~~~~~~~-~~i~~~~~~p~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v 385 (391)
.+..+..| ..|.+++|+|++. ++++|+.|+.|++||++............+|...|++++|+| ++.+|++++.||.|
T Consensus 242 ~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~sp-dg~~l~s~~~D~~i 320 (435)
T 4e54_B 242 ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSP-DGARLLTTDQKSEI 320 (435)
T ss_dssp BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCT-TSSEEEEEESSSCE
T ss_pred eeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECC-CCCeeEEEcCCCEE
Confidence 45555554 4899999999976 788999999999999987654433344568999999999999 66789999999999
Q ss_pred EEEecC
Q psy2107 386 KLWDLR 391 (391)
Q Consensus 386 ~iwdlr 391 (391)
+|||++
T Consensus 321 ~iwd~~ 326 (435)
T 4e54_B 321 RVYSAS 326 (435)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 999974
No 105
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.9e-31 Score=231.84 Aligned_cols=213 Identities=20% Similarity=0.348 Sum_probs=179.7
Q ss_pred eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC--CCEEEEEeC
Q psy2107 147 HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES--RQQFATGGW 224 (391)
Q Consensus 147 ~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~ 224 (391)
....+.+|.+.|++++| ++++.+|++|+.||.|++|++. ......+..+.+|...|.+++|+++ +++|++|+.
T Consensus 3 ~~~~~~~h~~~v~~~~~---s~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~ 77 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVL---DYYGKRLATCSSDKTIKIFEVE--GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY 77 (379)
T ss_dssp --CCEEECCCCEEEEEE---CSSSSEEEEEETTSCEEEEEEE--TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred ccEEecCCcccEEEEEE---cCCCCEEEEEECCCcEEEEecC--CCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc
Confidence 44567789999999999 7789999999999999999975 3456777888999999999999987 899999999
Q ss_pred CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC---CeEEEEECCCeEEEE
Q psy2107 225 DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV---DEIITSSWDHTLKIW 301 (391)
Q Consensus 225 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~l~s~~~dg~i~iw 301 (391)
||.|++||+++++ ......+..|...|.+++|+|+ ..+++++.|+.|++|
T Consensus 78 dg~v~iwd~~~~~---------------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~ 130 (379)
T 3jrp_A 78 DGKVLIWKEENGR---------------------------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVV 130 (379)
T ss_dssp TSCEEEEEEETTE---------------------------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEE
T ss_pred CCEEEEEEcCCCc---------------------------eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEE
Confidence 9999999997632 1256677789999999999964 569999999999999
Q ss_pred ecccCce--eEEEEC-CeeeEEEEECC-------------CCCEEEEeeCCCcEEEEcCCCCCcc-eEEEEeccccCcEE
Q psy2107 302 DAELGGM--KSEIVG-NKSFFDVHYSP-------------LSKLVITASADKQIRLYDPKVKEGA-IVKSTFSSHKEWVQ 364 (391)
Q Consensus 302 d~~~~~~--~~~~~~-~~~i~~~~~~p-------------~~~~l~~g~~dg~i~iwd~~~~~~~-~~~~~~~~h~~~v~ 364 (391)
|++++.. ...+.. ...+.+++|+| ++.+|++|+.|+.|++||++..... .+...+.+|...|+
T Consensus 131 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~ 210 (379)
T 3jrp_A 131 EFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVR 210 (379)
T ss_dssp ECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred ecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEe
Confidence 9998743 333433 44899999999 6999999999999999999765432 35567889999999
Q ss_pred EEEECCCC--CCEEEEeeCCCcEEEEecC
Q psy2107 365 SVRWSPID--PQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 365 ~~~~~~~~--~~~l~s~~~dg~v~iwdlr 391 (391)
+++|+|++ +.+|++++.||.|++||++
T Consensus 211 ~~~~sp~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 211 DVAWSPTVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp EEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred EEEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence 99999953 7899999999999999974
No 106
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.98 E-value=3.5e-30 Score=216.72 Aligned_cols=235 Identities=12% Similarity=0.141 Sum_probs=171.3
Q ss_pred cEEEEEec----CC-EEEEEECCCeEEEEcC-CC---ceEEeccCCCCCeeEEEEEec----------------------
Q psy2107 118 WVSAIDFH----ND-WILTGCYDHSVHIWTR-RG---EHKLNIPGHGGPVKGVAWLYN---------------------- 166 (391)
Q Consensus 118 ~V~~~~~~----~~-~l~t~~~dg~i~iwd~-~~---~~~~~~~~~~~~v~~l~~~~~---------------------- 166 (391)
.+.++-|. .+ .+++++. ..|++|+. ++ +.+.+...|..+|..+.+.|.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~ 119 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFC 119 (356)
T ss_dssp EEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC
T ss_pred EEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEE
Confidence 35555554 22 5666665 68999998 55 566777777776666666551
Q ss_pred CCC----CeEEEEEeC--------------------CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC---CCCEE
Q psy2107 167 DGK----DAAFISVST--------------------DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE---SRQQF 219 (391)
Q Consensus 167 ~~~----~~~l~s~~~--------------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~~~l 219 (391)
+++ +..+++++. |+.|++|++.. ..+.+..+.+|...++.++|++ ++.+|
T Consensus 120 spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~---dG~~~~s~~~~~~~v~~l~fs~~~g~~~~L 196 (356)
T 2w18_A 120 SSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAE---DGGGKENQFLMPPEETILTFAEVQGMQEAL 196 (356)
T ss_dssp ------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECT---TSCEEEEEEECCCSSCEEEEEEEETSTTEE
T ss_pred CCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECC---CCceeeeeccCCCceeeEEeeccCCCCceE
Confidence 556 666666553 88999999742 2356667778899999999999 77999
Q ss_pred EEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCcc---CcccEEEeccCCeE-------
Q psy2107 220 ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHK---EAISAVQWTAVDEI------- 289 (391)
Q Consensus 220 ~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~l------- 289 (391)
++|+.|++|++||+++++ .+.++.+|. ..+.+++|+|++.+
T Consensus 197 aSgS~D~TIkIWDl~TGk-----------------------------~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~ 247 (356)
T 2w18_A 197 LGTTIMNNIVIWNLKTGQ-----------------------------LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHP 247 (356)
T ss_dssp EEEETTSEEEEEETTTCC-----------------------------EEEEEECCC---CCCEEEEEEETTEEEEEEC--
T ss_pred EEecCCCcEEEEECCCCc-----------------------------EEEEEcCCCcceeeeEEEEECCCCCEEEEeccC
Confidence 999999999999998744 566676543 35667789977763
Q ss_pred ------EEEECCCeEEEEecccCceeEEEE-----CCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec
Q psy2107 290 ------ITSSWDHTLKIWDAELGGMKSEIV-----GNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS 357 (391)
Q Consensus 290 ------~s~~~dg~i~iwd~~~~~~~~~~~-----~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~ 357 (391)
++|+.|++|++||..+++.+..+. ++. .+.+..++ +.++++|+.|++|+|||+.+++ ++.++.
T Consensus 248 ~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk---~l~tL~ 322 (356)
T 2w18_A 248 CAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQ---CTALLP 322 (356)
T ss_dssp ----------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCS---EEEEEC
T ss_pred CCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCc---EEEEec
Confidence 567889999999999998876652 222 23333333 7789999999999999999887 888899
Q ss_pred cccCcEE-EEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 358 SHKEWVQ-SVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 358 ~h~~~v~-~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+|...+. .++|+| ++.+|+||+.|++|+|||+.
T Consensus 323 gH~~~vvs~vafSP-DG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 323 PVSDQHWSFVKWSG-TDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp CC--CCCCEEEECS-SSSEEEEECTTSCEEEEEEC
T ss_pred CCCCCeEEEEEECC-CCCEEEEEECCCcEEEecCC
Confidence 8987655 589999 66789999999999999974
No 107
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.98 E-value=1e-29 Score=222.01 Aligned_cols=208 Identities=24% Similarity=0.404 Sum_probs=172.9
Q ss_pred EEeccCCCCCeeEEEEEecCCC-CeEEEEEeCCCcEEEEeecCCCC-ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC
Q psy2107 148 KLNIPGHGGPVKGVAWLYNDGK-DAAFISVSTDQTAMIWEWKVESN-SIECIHVCRGHERGLETVTVSESRQQFATGGWD 225 (391)
Q Consensus 148 ~~~~~~~~~~v~~l~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d 225 (391)
..++.+|.+.|++|+| +|+ +++|++|+.||+|++||+..... ...+...+.+|...|.+++|+|++++|++|+.|
T Consensus 31 ~~tL~GH~~~V~~v~~---sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d 107 (340)
T 4aow_A 31 RGTLKGHNGWVTQIAT---TPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 107 (340)
T ss_dssp EEEECCCSSCEEEEEE---CTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEECCccCCEEEEEE---eCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc
Confidence 3478999999999999 544 57999999999999999864432 345677889999999999999999999999999
Q ss_pred CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEEEEECCCeEEEEecc
Q psy2107 226 CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAE 304 (391)
Q Consensus 226 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~dg~i~iwd~~ 304 (391)
+.|++|+... .........+...+..+.+++ +..+++++.|+.+++||+.
T Consensus 108 ~~i~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~ 158 (340)
T 4aow_A 108 GTLRLWDLTT-----------------------------GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL 158 (340)
T ss_dssp SEEEEEETTT-----------------------------TEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred ccceEEeecc-----------------------------cceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeC
Confidence 9999999975 234455566777888888885 4569999999999999987
Q ss_pred cCceeEEE-EC-CeeeEEEEECCCC--CEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEee
Q psy2107 305 LGGMKSEI-VG-NKSFFDVHYSPLS--KLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS 380 (391)
Q Consensus 305 ~~~~~~~~-~~-~~~i~~~~~~p~~--~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 380 (391)
........ .. ...+..++|++++ .++++++.|+.|++||++..+ +...+.+|.+.|++++|+| ++.+|++|+
T Consensus 159 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~---~~~~~~~h~~~v~~~~~s~-~~~~l~s~s 234 (340)
T 4aow_A 159 GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK---LKTNHIGHTGYLNTVTVSP-DGSLCASGG 234 (340)
T ss_dssp SCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECT-TSSEEEEEE
T ss_pred CCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc---eeeEecCCCCcEEEEEECC-CCCEEEEEe
Confidence 65543332 22 3478889998764 578899999999999998765 7778899999999999999 667899999
Q ss_pred CCCcEEEEecC
Q psy2107 381 FDNSVKLWDLR 391 (391)
Q Consensus 381 ~dg~v~iwdlr 391 (391)
.||.|++||++
T Consensus 235 ~Dg~i~iwd~~ 245 (340)
T 4aow_A 235 KDGQAMLWDLN 245 (340)
T ss_dssp TTCEEEEEETT
T ss_pred CCCeEEEEEec
Confidence 99999999985
No 108
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.98 E-value=6e-30 Score=224.68 Aligned_cols=231 Identities=11% Similarity=0.139 Sum_probs=169.9
Q ss_pred cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEE-EEEeCCCcEEEEee
Q psy2107 111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAF-ISVSTDQTAMIWEW 187 (391)
Q Consensus 111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l-~s~~~dg~v~iwd~ 187 (391)
....|.+.|++++|+ +++|++|+.+| ++||+...........+ ..+..+++. ++++.+ ++++.|++|++||+
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~d~~v~iWd~ 88 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM-RHLSKVRML---HRTNYVAFVTGVKEVVHIWDD 88 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC-SCCCEEEEC---TTSSEEEEECSSTTEEEEEET
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec-CCeEEEEEc---CCCCEEEEEECCccEEEEEEC
Confidence 345699999999998 66888888775 78999865443322222 247778884 444544 67888999999995
Q ss_pred cCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC-CCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107 188 KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADIS-KERGDPSENGDEGTTSKKRKKEYSSASSRT 266 (391)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (391)
. ..+.+..+. +...|.+++++++. ++++ .|+.|++||+.+. +.
T Consensus 89 ~----~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~---------------------------- 132 (355)
T 3vu4_A 89 V----KKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKR---------------------------- 132 (355)
T ss_dssp T----TTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCB----------------------------
T ss_pred C----CCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCcee----------------------------
Confidence 4 335566665 66799999999864 4443 4789999999874 22
Q ss_pred ceeeecCccCcccEEEeccCCeEEE--EECCCeEEEEecccCc----------------eeEEEECCe-eeEEEEECCCC
Q psy2107 267 PLITLKGHKEAISAVQWTAVDEIIT--SSWDHTLKIWDAELGG----------------MKSEIVGNK-SFFDVHYSPLS 327 (391)
Q Consensus 267 ~~~~~~~~~~~v~~~~~~~~~~l~s--~~~dg~i~iwd~~~~~----------------~~~~~~~~~-~i~~~~~~p~~ 327 (391)
+..+.. +...+++++ ..++. |+.||.|++||+.++. .+..+..|. .|.+++|+|+|
T Consensus 133 -~~~~~~---~~~~~~~s~-~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g 207 (355)
T 3vu4_A 133 -ITDDIR---FGGVCEFSN-GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS 207 (355)
T ss_dssp -SSCCEE---EEEEEEEET-TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTS
T ss_pred -eEEecc---CCceEEEEc-cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCC
Confidence 222222 233444555 56555 5789999999999865 256666665 89999999999
Q ss_pred CEEEEeeCCCc-EEEEcCCCCCcceEEEEec-c-ccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 328 KLVITASADKQ-IRLYDPKVKEGAIVKSTFS-S-HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 328 ~~l~~g~~dg~-i~iwd~~~~~~~~~~~~~~-~-h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
++|++|+.|++ |++||+++++ .+..+. + |...|++++|+| ++.+|++++.|++|++||++
T Consensus 208 ~~l~s~s~d~~~v~iwd~~~~~---~~~~~~~g~h~~~v~~~~~s~-~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 208 DMVATCSQDGTIIRVFKTEDGV---LVREFRRGLDRADVVDMKWST-DGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp SEEEEEETTCSEEEEEETTTCC---EEEEEECTTCCSCEEEEEECT-TSCEEEEEETTCEEEEEESS
T ss_pred CEEEEEeCCCCEEEEEECCCCc---EEEEEEcCCCCCcEEEEEECC-CCCEEEEEECCCEEEEEEcc
Confidence 99999999998 9999998876 667776 5 999999999999 66789999999999999984
No 109
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=9.2e-30 Score=222.75 Aligned_cols=218 Identities=18% Similarity=0.290 Sum_probs=180.2
Q ss_pred eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC--CCCEEEEEeCCCc
Q psy2107 150 NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE--SRQQFATGGWDCL 227 (391)
Q Consensus 150 ~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~sg~~dg~ 227 (391)
.+.+|.+.|++++| ++++.+|++|+.||.|++||+............+.+|...|.+++|+| ++++|++|+.||.
T Consensus 6 ~~~gH~~~v~~~~~---~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 6 FDSGHDDLVHDVVY---DFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp EECCCSSCEEEEEE---CSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cCcccccceeEEEE---cCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 35689999999999 778999999999999999998765555577888899999999999999 6999999999999
Q ss_pred EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC---CeEEEEECCCeEEEEecc
Q psy2107 228 LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV---DEIITSSWDHTLKIWDAE 304 (391)
Q Consensus 228 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~l~s~~~dg~i~iwd~~ 304 (391)
|++||++++..... .....+...+..|...|.+++|+++ ..+++++.||.|++||++
T Consensus 83 v~vwd~~~~~~~~~--------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 142 (351)
T 3f3f_A 83 VKLWEEDPDQEECS--------------------GRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDAL 142 (351)
T ss_dssp EEEEEECTTSCTTS--------------------SCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECS
T ss_pred EEEEecCCCccccc--------------------ccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCC
Confidence 99999987543110 0112356778889999999999964 569999999999999999
Q ss_pred cCceeEEEE--------------CCeeeEEEEECCC---CCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEE
Q psy2107 305 LGGMKSEIV--------------GNKSFFDVHYSPL---SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVR 367 (391)
Q Consensus 305 ~~~~~~~~~--------------~~~~i~~~~~~p~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 367 (391)
+++.+..+. ....+.+++|+|+ +.++++++.++.+.+|+..... ......+.+|...|++++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~h~~~i~~~~ 221 (351)
T 3f3f_A 143 EPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK-LHVAAKLPGHKSLIRSIS 221 (351)
T ss_dssp STTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC-EEEEEECCCCCSCEEEEE
T ss_pred ChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc-eeeeeecCCCCcceeEEE
Confidence 887554432 2347899999997 8999999999999888766543 334677889999999999
Q ss_pred ECCCCC---CEEEEeeCCCcEEEEecC
Q psy2107 368 WSPIDP---QLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 368 ~~~~~~---~~l~s~~~dg~v~iwdlr 391 (391)
|+|+++ .+|++++.||.|++||++
T Consensus 222 ~~p~~~~~~~~l~s~~~dg~i~iwd~~ 248 (351)
T 3f3f_A 222 WAPSIGRWYQLIATGCKDGRIRIFKIT 248 (351)
T ss_dssp ECCCSSCSSEEEEEEETTSCEEEEEEE
T ss_pred ECCCCCCcceEEEEEcCCCeEEEEeCC
Confidence 999542 689999999999999974
No 110
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=7.7e-30 Score=224.67 Aligned_cols=226 Identities=10% Similarity=0.016 Sum_probs=171.3
Q ss_pred CCccceEEEEEEeccCCC-------CCCcccCCCCcEEEEEec--CCEEEE--EECCCeEEEEcCCCceEEeccCCCCCe
Q psy2107 90 ISSENVIDVEYLESTPTP-------SPLDCILHDDWVSAIDFH--NDWILT--GCYDHSVHIWTRRGEHKLNIPGHGGPV 158 (391)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~-------~~~~~~~h~~~V~~~~~~--~~~l~t--~~~dg~i~iwd~~~~~~~~~~~~~~~v 158 (391)
.+.++.+++|........ .......+...+.+++|+ |+++++ ++.|++|+|||+..........|.+.|
T Consensus 100 ~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V 179 (365)
T 4h5i_A 100 GKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEV 179 (365)
T ss_dssp TSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCC
T ss_pred ecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCce
Confidence 346677888876533221 122334466789999998 556654 457899999999554444334588899
Q ss_pred eEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC----cEEEEECC
Q psy2107 159 KGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC----LLKIWSAD 234 (391)
Q Consensus 159 ~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg----~i~iwd~~ 234 (391)
.+++| +|++.++++++.++ +++|+.. ............|...|.+++|+|+++++++++.|+ .+++|++.
T Consensus 180 ~~v~f---spdg~~l~s~s~~~-~~~~~~~--~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~ 253 (365)
T 4h5i_A 180 KDLHF---STDGKVVAYITGSS-LEVISTV--TGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIK 253 (365)
T ss_dssp CEEEE---CTTSSEEEEECSSC-EEEEETT--TCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEE
T ss_pred EEEEE---ccCCceEEecccee-EEEEEec--cCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccc
Confidence 99999 78899999998655 5566532 333333345567888999999999999999999887 57888876
Q ss_pred CCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEE-
Q psy2107 235 ISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEI- 312 (391)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~- 312 (391)
..... ......+.+|...|++++|+|++ +|++|+.|++|+|||+++++++..+
T Consensus 254 ~~~~~-------------------------~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~ 308 (365)
T 4h5i_A 254 SGNTS-------------------------VLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFK 308 (365)
T ss_dssp TTEEE-------------------------EEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEET
T ss_pred cceec-------------------------ceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEec
Confidence 53210 11244677899999999999766 5889999999999999999999886
Q ss_pred ECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107 313 VGN-KSFFDVHYSPLSKLVITASADKQIRLYDPKV 346 (391)
Q Consensus 313 ~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~ 346 (391)
.+| ..|++++|+|+|++|++|+.|++|+|||+..
T Consensus 309 ~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 309 QAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 444 4899999999999999999999999999864
No 111
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=1e-29 Score=229.20 Aligned_cols=217 Identities=18% Similarity=0.339 Sum_probs=177.2
Q ss_pred EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC------CCceeEEEEEecCCCCeEEEEEcCCCC-EEEE
Q psy2107 149 LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE------SNSIECIHVCRGHERGLETVTVSESRQ-QFAT 221 (391)
Q Consensus 149 ~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~------~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~s 221 (391)
.....|.+.|++++|+|. ++.+|++++.||.|++|++... ......+..+.+|...|.+++|+|++. +|++
T Consensus 122 ~~~~~h~~~v~~l~~~p~--~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 199 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQ--NACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLS 199 (430)
T ss_dssp EEEEEESSCCSEEEEETT--EEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEE
T ss_pred EEEEcCCCcEEEEEECCC--CCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEE
Confidence 455679999999999542 3679999999999999997631 112456678889999999999999988 9999
Q ss_pred EeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc--CCeEEEEECCCeEE
Q psy2107 222 GGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA--VDEIITSSWDHTLK 299 (391)
Q Consensus 222 g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~s~~~dg~i~ 299 (391)
|+.||.|++||+..+.... ....+...+.+|...|.+++|+| ...|++++.||.|+
T Consensus 200 ~~~dg~i~vwd~~~~~~~~----------------------~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~ 257 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEH----------------------RVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLM 257 (430)
T ss_dssp ECTTSCEEEEETTSCCBGG----------------------GEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred EeCCCeEEEEeCCCCCCCC----------------------ceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEE
Confidence 9999999999997632210 00123456678999999999996 34588999999999
Q ss_pred EEecccC---ceeEEEECC-eeeEEEEECCCCC-EEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCC
Q psy2107 300 IWDAELG---GMKSEIVGN-KSFFDVHYSPLSK-LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQ 374 (391)
Q Consensus 300 iwd~~~~---~~~~~~~~~-~~i~~~~~~p~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 374 (391)
+||++++ +.+..+..+ ..+.+++|+|++. ++++|+.||.|++||++... ..+..+.+|...|++++|+|++..
T Consensus 258 i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~--~~~~~~~~h~~~v~~i~~sp~~~~ 335 (430)
T 2xyi_A 258 IWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNET 335 (430)
T ss_dssp EEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT--SCSEEEECCSSCEEEEEECSSCTT
T ss_pred EEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC--CCeEEeecCCCCEEEEEECCCCCC
Confidence 9999987 566666555 4899999999987 68899999999999998733 245677789999999999997778
Q ss_pred EEEEeeCCCcEEEEecC
Q psy2107 375 LFVSASFDNSVKLWDLR 391 (391)
Q Consensus 375 ~l~s~~~dg~v~iwdlr 391 (391)
+|++++.||.|+|||++
T Consensus 336 ~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 336 ILASSGTDRRLHVWDLS 352 (430)
T ss_dssp EEEEEETTSCCEEEEGG
T ss_pred EEEEEeCCCcEEEEeCC
Confidence 89999999999999974
No 112
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.9e-30 Score=223.90 Aligned_cols=250 Identities=10% Similarity=0.027 Sum_probs=180.1
Q ss_pred CccceEEEEEEeccCCCCCCcccCCCCcEEEEEecCCEEEEEECCCeEEEEcCCCce----------EEec-cCCCCCee
Q psy2107 91 SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEH----------KLNI-PGHGGPVK 159 (391)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~~~~~----------~~~~-~~~~~~v~ 159 (391)
+.++.+.+|..........+. ...|.++.+++. +++++.|++|++|+..+.. +... .+|.+.|.
T Consensus 55 ~~Dg~v~iwd~~~~~~~~~~~----~~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 129 (343)
T 3lrv_A 55 CEDGALHFTQLKDSKTITTIT----TPNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEII 129 (343)
T ss_dssp EETTEEEEEEESSSSCEEEEE----EECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEE
T ss_pred CCCCcEEEEECCCCcEEEEEe----cCCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEE
Confidence 468889999875433211111 345667777777 9999999999999765321 3333 36778999
Q ss_pred EEEEEecCC--CCeEEEEEeCCCcEEEEeecCCCCceeEEEEE-ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy2107 160 GVAWLYNDG--KDAAFISVSTDQTAMIWEWKVESNSIECIHVC-RGHERGLETVTVSESRQQFATGGWDCLLKIWSADIS 236 (391)
Q Consensus 160 ~l~~~~~~~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~ 236 (391)
+++| ++ ++.++++|+.||+|++||++ .. ..+... ..|...|.+++|+|++.+|++|+.||.|++||++++
T Consensus 130 ~~~~---~~~~~~~~l~s~s~dg~i~~wd~~--~~--~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~ 202 (343)
T 3lrv_A 130 YMYG---HNEVNTEYFIWADNRGTIGFQSYE--DD--SQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSP 202 (343)
T ss_dssp EEEC---CC---CCEEEEEETTCCEEEEESS--SS--CEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCT
T ss_pred EEEc---CCCCCCCEEEEEeCCCcEEEEECC--CC--cEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 9999 66 78899999999999999965 22 334444 345668999999999999999999999999999874
Q ss_pred CCCCCCCCCCCCCccccccccccccCCCCCceeeecC-ccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEEC
Q psy2107 237 KERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG-HKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVG 314 (391)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~ 314 (391)
+. ....+.. |..+|.+++|+|++. |++++ |+.|++||+++++....+..
T Consensus 203 ~~----------------------------~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~ 253 (343)
T 3lrv_A 203 DQ----------------------------ASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPT 253 (343)
T ss_dssp TS----------------------------CCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCC
T ss_pred CC----------------------------CccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecc
Confidence 32 1145666 999999999997665 66777 66999999999876544432
Q ss_pred ---C-eee--EEEEECCCCCEEEEeeC-CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECC--CCCCEEEEeeCCCcE
Q psy2107 315 ---N-KSF--FDVHYSPLSKLVITASA-DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP--IDPQLFVSASFDNSV 385 (391)
Q Consensus 315 ---~-~~i--~~~~~~p~~~~l~~g~~-dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~~l~s~~~dg~v 385 (391)
+ ..+ .+++|+|+|++|++++. |+.|++|++........ . .++..++|.+ .+...+++++.||.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~l~~~~~d~~~ 326 (343)
T 3lrv_A 254 YTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWT---K----DEESALCLQSDTADFTDMDVVCGDGGI 326 (343)
T ss_dssp CBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEE---E----EEEEECCC----CCCCEEEEEEETTEE
T ss_pred cccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceE---e----cCceeEecCccccccceeEEEecCCce
Confidence 1 122 46999999999999988 99999999865432111 1 4566777766 123457777777777
Q ss_pred EEE
Q psy2107 386 KLW 388 (391)
Q Consensus 386 ~iw 388 (391)
.++
T Consensus 327 ~~~ 329 (343)
T 3lrv_A 327 AAI 329 (343)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 113
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.8e-29 Score=220.73 Aligned_cols=205 Identities=20% Similarity=0.318 Sum_probs=173.9
Q ss_pred eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC
Q psy2107 147 HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC 226 (391)
Q Consensus 147 ~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg 226 (391)
....+.+|.+.|++++| ++++.+|++|+.||.|++||+. ....+..+.+|...|.+++|+|++++|++++.||
T Consensus 24 ~~~~l~~h~~~v~~~~~---s~~~~~l~~~~~dg~i~vwd~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 96 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKY---NKEGDLLFSCSKDSSASVWYSL----NGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADY 96 (369)
T ss_dssp EEEEEECCSSCEEEEEE---CTTSCEEEEEESSSCEEEEETT----TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTT
T ss_pred ccEEEEEeeceEEEEEE---cCCCCEEEEEeCCCEEEEEeCC----CchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCC
Confidence 44567899999999999 7789999999999999999964 3467788899999999999999999999999999
Q ss_pred cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECC-----CeEEE
Q psy2107 227 LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWD-----HTLKI 300 (391)
Q Consensus 227 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d-----g~i~i 300 (391)
.|++||+++++ .+..+. +...+.+++|++++ .+++++.+ +.|++
T Consensus 97 ~i~iwd~~~~~-----------------------------~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~ 146 (369)
T 3zwl_B 97 SIKLWDVSNGQ-----------------------------CVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINI 146 (369)
T ss_dssp EEEEEETTTCC-----------------------------EEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEE
T ss_pred eEEEEECCCCc-----------------------------EEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEE
Confidence 99999997633 445555 78899999999655 58888888 99999
Q ss_pred EecccCce-----------eEEEECCe---eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEE
Q psy2107 301 WDAELGGM-----------KSEIVGNK---SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSV 366 (391)
Q Consensus 301 wd~~~~~~-----------~~~~~~~~---~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~ 366 (391)
||+..+.. ...+..+. .+.+++|+|++++|++|+.||.|++||++.. ......+..|...|.++
T Consensus 147 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~v~~~ 224 (369)
T 3zwl_B 147 YEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNN--YEYVDSIDLHEKSISDM 224 (369)
T ss_dssp EEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTT--TEEEEEEECCSSCEEEE
T ss_pred EEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCC--cEeEEEEecCCCceeEE
Confidence 99987642 22232222 7999999999999999999999999999862 22667888899999999
Q ss_pred EECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 367 RWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 367 ~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+|+| ++.+|++++.||.|++||++
T Consensus 225 ~~~~-~~~~l~~~~~d~~i~v~d~~ 248 (369)
T 3zwl_B 225 QFSP-DLTYFITSSRDTNSFLVDVS 248 (369)
T ss_dssp EECT-TSSEEEEEETTSEEEEEETT
T ss_pred EECC-CCCEEEEecCCceEEEEECC
Confidence 9999 67789999999999999975
No 114
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=8.3e-29 Score=221.66 Aligned_cols=240 Identities=18% Similarity=0.278 Sum_probs=183.3
Q ss_pred ccCCCCcEEEEEecC---CEEEEEECCCeEEEEcCCCc-eEEec-------------cCCCCCeeEEEEEecCCCCeEEE
Q psy2107 112 CILHDDWVSAIDFHN---DWILTGCYDHSVHIWTRRGE-HKLNI-------------PGHGGPVKGVAWLYNDGKDAAFI 174 (391)
Q Consensus 112 ~~~h~~~V~~~~~~~---~~l~t~~~dg~i~iwd~~~~-~~~~~-------------~~~~~~v~~l~~~~~~~~~~~l~ 174 (391)
..+|.+.|++++|++ ++|++|+.||.|++||+... ....+ .+|...|.+++|+|. ++.+|+
T Consensus 39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~ 116 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPH--DTGMFT 116 (408)
T ss_dssp CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTT--CTTCEE
T ss_pred eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccC--CCcEEE
Confidence 446999999999974 69999999999999999432 21111 259999999999432 667999
Q ss_pred EEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC---CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcc
Q psy2107 175 SVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES---RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTT 251 (391)
Q Consensus 175 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~---~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 251 (391)
+++.||.|++||+. .......+. +...+.++.+++. +.++++|+.||.|++||+++
T Consensus 117 s~~~d~~i~iwd~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~---------------- 175 (408)
T 4a11_B 117 SSSFDKTLKVWDTN----TLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS---------------- 175 (408)
T ss_dssp EEETTSEEEEEETT----TTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS----------------
T ss_pred EEeCCCeEEEeeCC----CCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC----------------
Confidence 99999999999965 234445544 6788999999984 45999999999999999976
Q ss_pred ccccccccccCCCCCceeeecCccCcccEEEeccCC--eEEEEECCCeEEEEecccCc-eeEEE----------------
Q psy2107 252 SKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGG-MKSEI---------------- 312 (391)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~-~~~~~---------------- 312 (391)
...+..+..|...|.+++|+|++ .+++++.||.|++||++++. ....+
T Consensus 176 -------------~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (408)
T 4a11_B 176 -------------GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANT 242 (408)
T ss_dssp -------------SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSC
T ss_pred -------------cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccc
Confidence 33566788899999999999765 48899999999999998775 33333
Q ss_pred ECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc-----cCcEEEEEECCCCCCEEEEeeCCCcEEE
Q psy2107 313 VGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH-----KEWVQSVRWSPIDPQLFVSASFDNSVKL 387 (391)
Q Consensus 313 ~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~l~s~~~dg~v~i 387 (391)
.+...+.+++|+|++++|++++.||.|++||+++.... .....+ ...+. ..+.......+++++.|+.|++
T Consensus 243 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v 318 (408)
T 4a11_B 243 AHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENT---LVNYGKVCNNSKKGLK-FTVSCGCSSEFVFVPYGSTIAV 318 (408)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBC---CCCCCCCCCCCSSCCC-CEECCSSSSCEEEEEETTEEEE
T ss_pred cccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccc---eeccccccccccccce-eEEecCCCceEEEEecCCEEEE
Confidence 12347999999999999999999999999999876522 111111 11122 2222223445777788999999
Q ss_pred EecC
Q psy2107 388 WDLR 391 (391)
Q Consensus 388 wdlr 391 (391)
||++
T Consensus 319 ~d~~ 322 (408)
T 4a11_B 319 YTVY 322 (408)
T ss_dssp EETT
T ss_pred EECc
Confidence 9974
No 115
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=2.5e-29 Score=226.05 Aligned_cols=238 Identities=18% Similarity=0.299 Sum_probs=194.3
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEecCCEEEEEECCCeEEEEcCC-
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRR- 144 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~~- 144 (391)
....|.++|+++++ .+.++.+.+|....... .....+|...|.++++++..+++|+.|+.+++||..
T Consensus 151 ~sv~fspdg~~las----------gs~Dg~v~iWd~~~~~~--~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~ 218 (420)
T 4gga_A 151 SSVAWIKEGNYLAV----------GTSSAEVQLWDVQQQKR--LRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRV 218 (420)
T ss_dssp EEEEECTTSSEEEE----------EETTSCEEEEETTTTEE--EEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTS
T ss_pred EEEEECCCCCEEEE----------EECCCeEEEEEcCCCcE--EEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecc
Confidence 45688899988765 34678899998654322 345567999999999999999999999999999983
Q ss_pred -CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCC-CEEEE-
Q psy2107 145 -GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESR-QQFAT- 221 (391)
Q Consensus 145 -~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~s- 221 (391)
...+..+.+|...+..+.| .+++.++++++.||.+++|+..........+.....|...|.+++|+|.+ .++++
T Consensus 219 ~~~~~~~~~~h~~~~~~~~~---~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~ 295 (420)
T 4gga_A 219 AEHHVATLSGHSQEVCGLRW---APDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATG 295 (420)
T ss_dssp SSCEEEEEECCSSCEEEEEE---CTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEE
T ss_pred cceeeEEecccccceeeeee---cCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEE
Confidence 4566678899999999999 77899999999999999999765544445567778899999999999965 45554
Q ss_pred -EeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEEEEE--CCCe
Q psy2107 222 -GGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITSS--WDHT 297 (391)
Q Consensus 222 -g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~--~dg~ 297 (391)
|+.|+.|++||+.+++ ....+.. ...+.++.|++ .+.+++++ .|+.
T Consensus 296 ~gs~D~~I~iwd~~t~~-----------------------------~~~~~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~ 345 (420)
T 4gga_A 296 GGTSDRHIRIWNVCSGA-----------------------------CLSAVDA-HSQVCSILWSPHYKELISGHGFAQNQ 345 (420)
T ss_dssp ECTTTCEEEEEETTTTE-----------------------------EEEEEEC-SSCEEEEEEETTTTEEEEEECTTTCC
T ss_pred eecCCCEEEEEeCCccc-----------------------------cceeecc-ccceeeeeecCCCCeEEEEEecCCCE
Confidence 4579999999997733 4445544 45678888884 45566654 7999
Q ss_pred EEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107 298 LKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348 (391)
Q Consensus 298 i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~ 348 (391)
|++||+.+++++.++.+|. .|.+++|+|+|++|++|+.|++|+|||+....
T Consensus 346 I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 346 LVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 9999999999999999776 89999999999999999999999999987644
No 116
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=1.2e-28 Score=217.48 Aligned_cols=215 Identities=16% Similarity=0.194 Sum_probs=169.7
Q ss_pred CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe
Q psy2107 144 RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG 223 (391)
Q Consensus 144 ~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~ 223 (391)
....+..+.+|.+.|++++|+|...++.+|++|+.||.|++||+.. ........+.+|...|.+++|+|++++|++|+
T Consensus 28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQD--SGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS 105 (368)
T ss_dssp TTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECT--TSCEEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred CcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCC--CCceeEEEeccccCCEEEEEECcCCCEEEEEc
Confidence 3456667889999999999944322269999999999999999763 22344477888999999999999999999999
Q ss_pred CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEe--ccCC-eEEEEECCCeEEE
Q psy2107 224 WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQW--TAVD-EIITSSWDHTLKI 300 (391)
Q Consensus 224 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~-~l~s~~~dg~i~i 300 (391)
.||.|++||+++++ ...+..|...|.+++| ++++ .+++++.|+.|++
T Consensus 106 ~dg~v~iwd~~~~~------------------------------~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~v 155 (368)
T 3mmy_A 106 CDKTAKMWDLSSNQ------------------------------AIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKF 155 (368)
T ss_dssp TTSEEEEEETTTTE------------------------------EEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEE
T ss_pred CCCcEEEEEcCCCC------------------------------ceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEE
Confidence 99999999997632 2235579999999999 6655 4999999999999
Q ss_pred EecccCceeEEEECCeee------------------------------------------EEEEECCCCCE----EEEee
Q psy2107 301 WDAELGGMKSEIVGNKSF------------------------------------------FDVHYSPLSKL----VITAS 334 (391)
Q Consensus 301 wd~~~~~~~~~~~~~~~i------------------------------------------~~~~~~p~~~~----l~~g~ 334 (391)
||+++++.+..+..+..+ .++++.++... +++|+
T Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (368)
T 3mmy_A 156 WDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS 235 (368)
T ss_dssp ECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEE
T ss_pred EECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEec
Confidence 999998887777654322 23333333332 89999
Q ss_pred CCCcEEEEcCCCCCcceEEEEeccccC------------cEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 335 ADKQIRLYDPKVKEGAIVKSTFSSHKE------------WVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 335 ~dg~i~iwd~~~~~~~~~~~~~~~h~~------------~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
.||.|++||++..........+.+|.. .|++++|+| ++.+|++++.||.|++||++
T Consensus 236 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~~~dg~i~iwd~~ 303 (368)
T 3mmy_A 236 IEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHP-VHGTLATVGSDGRFSFWDKD 303 (368)
T ss_dssp TTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECT-TTCCEEEEETTSCEEEEETT
T ss_pred CCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEec-CCCEEEEEccCCeEEEEECC
Confidence 999999999987643234556666765 799999999 56689999999999999974
No 117
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.6e-29 Score=221.30 Aligned_cols=229 Identities=8% Similarity=0.069 Sum_probs=177.4
Q ss_pred CCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCCC-----CeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107 114 LHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHGG-----PVKGVAWLYNDGKDAAFISVSTDQTAMIWE 186 (391)
Q Consensus 114 ~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~-----~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd 186 (391)
+|.+.|.+++|+ |++||+++.||.|++||.++ .+..+. |.. .|.+++| +|++++|++|+.||+|++||
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svaf---SPDG~~LAsgs~DGtVkIWd 157 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEW---NPIESSIVVGNEDGELQFFS 157 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEE---CSSSSCEEEEETTSEEEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeecc-CCCccccccEEEEEE---cCCCCEEEEEcCCCEEEEEE
Confidence 568899999999 67999999999999999755 555556 665 5999999 88999999999999999999
Q ss_pred ecCCCC---ceeEEEEE----ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccccc
Q psy2107 187 WKVESN---SIECIHVC----RGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEY 259 (391)
Q Consensus 187 ~~~~~~---~~~~~~~~----~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (391)
+..... ....+..+ .+|...|.+++|+|+| +++++.|+.|++||+..+..
T Consensus 158 ~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~--------------------- 214 (588)
T 2j04_A 158 IRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSH--------------------- 214 (588)
T ss_dssp CCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSS---------------------
T ss_pred CCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcc---------------------
Confidence 653211 11245666 5677899999999999 88999999999999976332
Q ss_pred ccCCCCCceeee-cCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEE-ECCeeeEEEEE--CCCCCEEEEeeC
Q psy2107 260 SSASSRTPLITL-KGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEI-VGNKSFFDVHY--SPLSKLVITASA 335 (391)
Q Consensus 260 ~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~i~~~~~--~p~~~~l~~g~~ 335 (391)
.....++ .+|...|.+++|+ ++.+++++ +++|++||+.+++..... .+...+..++| +|++..+++++.
T Consensus 215 -----~~~~~tL~~~h~~~V~svaFs-g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~e 287 (588)
T 2j04_A 215 -----QPVSRMIQNASRRKITDLKIV-DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNK 287 (588)
T ss_dssp -----CCCEEEEECCCSSCCCCEEEE-TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSS
T ss_pred -----ccceeeecccccCcEEEEEEE-CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcC
Confidence 1123456 4788999999999 67788887 799999999988774443 44458999999 999999999999
Q ss_pred CCcEEEEcCCCCC---------------------cceEEEEeccccCcEEEEEECCCCCCEEEEeeC
Q psy2107 336 DKQIRLYDPKVKE---------------------GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF 381 (391)
Q Consensus 336 dg~i~iwd~~~~~---------------------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 381 (391)
||. ++|....-. +. ....+. +...|.+++|+| +++++|+++.
T Consensus 288 dG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~-~l~~~~-~~~~I~~va~SP-dG~~lA~~~~ 350 (588)
T 2j04_A 288 TSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWN-EFNNYE-TTLVIHGISLSP-DGYSIAIVYD 350 (588)
T ss_dssp CEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTT-SSSSSC-CEEEEEEEEECT-TSSEEEEEEE
T ss_pred CCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCC-ceeeec-cceEEEEEEECC-CCCEEEEEEe
Confidence 999 999863100 00 011222 245699999999 6678888864
No 118
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.8e-29 Score=239.22 Aligned_cols=211 Identities=20% Similarity=0.355 Sum_probs=176.6
Q ss_pred EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC--CCEEEEEeCCC
Q psy2107 149 LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES--RQQFATGGWDC 226 (391)
Q Consensus 149 ~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg 226 (391)
..+.+|.+.|++++| ++++.++++|+.||.|++||+. ......+..+.+|.+.|.+++|+|+ +++|++|+.||
T Consensus 3 ~~l~gH~~~V~~l~~---s~dg~~latg~~dg~I~vwd~~--~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg 77 (753)
T 3jro_A 3 VIANAHNELIHDAVL---DYYGKRLATCSSDKTIKIFEVE--GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 77 (753)
T ss_dssp -----CCCCEEEECC---CSSSCCEEEEETTTEEEEEEEE--TTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS
T ss_pred eecccCcceeEEEEE---CCCCCeEEEEECCCcEEEEecC--CCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC
Confidence 356789999999999 7788999999999999999965 3456778889999999999999988 99999999999
Q ss_pred cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC---CeEEEEECCCeEEEEec
Q psy2107 227 LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV---DEIITSSWDHTLKIWDA 303 (391)
Q Consensus 227 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~l~s~~~dg~i~iwd~ 303 (391)
.|++||+++++ ......+.+|...|.+++|+|+ ..+++|+.||.|++||+
T Consensus 78 ~I~vwd~~~~~---------------------------~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl 130 (753)
T 3jro_A 78 KVLIWKEENGR---------------------------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEF 130 (753)
T ss_dssp CEEEEEEETTE---------------------------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEC
T ss_pred eEEEEECCCCc---------------------------ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEe
Confidence 99999997632 1256677889999999999964 57999999999999999
Q ss_pred ccCc--eeEEEEC-CeeeEEEEECC-------------CCCEEEEeeCCCcEEEEcCCCCCcc-eEEEEeccccCcEEEE
Q psy2107 304 ELGG--MKSEIVG-NKSFFDVHYSP-------------LSKLVITASADKQIRLYDPKVKEGA-IVKSTFSSHKEWVQSV 366 (391)
Q Consensus 304 ~~~~--~~~~~~~-~~~i~~~~~~p-------------~~~~l~~g~~dg~i~iwd~~~~~~~-~~~~~~~~h~~~v~~~ 366 (391)
+++. ....+.. ...+.+++|+| ++.++++|+.||.|++||++..... .+...+.+|...|+++
T Consensus 131 ~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l 210 (753)
T 3jro_A 131 KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV 210 (753)
T ss_dssp CSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred ecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEE
Confidence 8873 2333444 45899999999 5899999999999999999875432 4666788999999999
Q ss_pred EECCCC--CCEEEEeeCCCcEEEEecC
Q psy2107 367 RWSPID--PQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 367 ~~~~~~--~~~l~s~~~dg~v~iwdlr 391 (391)
+|+|++ +.++++++.||.|++||++
T Consensus 211 ~~sp~~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 211 AWSPTVLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp EECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred EeccCCCCCCEEEEEecCCEEEEecCC
Confidence 999953 7899999999999999974
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=3.5e-28 Score=213.40 Aligned_cols=280 Identities=12% Similarity=0.119 Sum_probs=186.6
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEe--cCCEE-EEEECCCeEEEEc
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDF--HNDWI-LTGCYDHSVHIWT 142 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~--~~~~l-~t~~~dg~i~iwd 142 (391)
...+|.++|+++++. .+..+++|....... ....+...+..+++ +++.+ ++|+.|++|++||
T Consensus 23 ~~v~fs~dg~~la~g-----------~~~~~~iw~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 23 TDYEFNQDQSCLILS-----------TLKSFEIYNVHPVAH----IMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp CEEEECTTSSEEEEE-----------CSSEEEEEEETTEEE----EEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEE
T ss_pred EEEEECCCCCEEEEE-----------cCCEEEEEecCCcce----eeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEE
Confidence 557999999888752 233456776532211 11111113444444 46655 6788889999999
Q ss_pred CC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEE
Q psy2107 143 RR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFAT 221 (391)
Q Consensus 143 ~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s 221 (391)
.. +..+..+. +...|.+++| +++ .++++ .|+.|++||+.... +.+..+.. +...+++++ .+++.
T Consensus 88 ~~~~~~~~~~~-~~~~v~~v~~---~~~--~~~~~-~~~~i~i~d~~~~~---~~~~~~~~---~~~~~~~s~--~~la~ 152 (355)
T 3vu4_A 88 DVKKQDVSRIK-VDAPVKDLFL---SRE--FIVVS-YGDVISVFKFGNPW---KRITDDIR---FGGVCEFSN--GLLVY 152 (355)
T ss_dssp TTTTEEEEEEE-CSSCEEEEEE---CSS--EEEEE-ETTEEEEEESSTTC---CBSSCCEE---EEEEEEEET--TEEEE
T ss_pred CCCCcEEEEEE-CCCceEEEEE---cCC--EEEEE-EcCEEEEEECCCCc---eeeEEecc---CCceEEEEc--cEEEE
Confidence 94 55555554 7789999999 444 34443 48899999976331 11222222 344566677 56665
Q ss_pred --EeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCc-eeeecCccCcccEEEeccCC-eEEEEECCCe
Q psy2107 222 --GGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTP-LITLKGHKEAISAVQWTAVD-EIITSSWDHT 297 (391)
Q Consensus 222 --g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~ 297 (391)
|+.||.|++||++++.......... ......+ +..+.+|...|.+++|+|++ .|++|+.|++
T Consensus 153 ~sg~~~g~v~iwd~~~~~~~~~~~~~~--------------~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~ 218 (355)
T 3vu4_A 153 SNEFNLGQIHITKLQSSGSATTQDQGV--------------QQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGT 218 (355)
T ss_dssp EESSCTTCEEEEECCC--------------------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCS
T ss_pred eCCCcCcEEEEEECCCCCccccccccc--------------cccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCC
Confidence 6889999999998644211000000 0001123 67889999999999999765 5999999998
Q ss_pred -EEEEecccCceeEEEE---CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEE-------------------E
Q psy2107 298 -LKIWDAELGGMKSEIV---GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVK-------------------S 354 (391)
Q Consensus 298 -i~iwd~~~~~~~~~~~---~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~-------------------~ 354 (391)
|++||+++++.+..+. +...|.+++|+|++++|++|+.|+.|++||++........ .
T Consensus 219 ~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (355)
T 3vu4_A 219 IIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNF 298 (355)
T ss_dssp EEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEE
T ss_pred EEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEE
Confidence 9999999999999998 4558999999999999999999999999999754311100 0
Q ss_pred Ee-ccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 355 TF-SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 355 ~~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
.+ ..+......++|++ ++..+++++.||.+++|++
T Consensus 299 ~~~~~~~~~~~~~a~~~-d~~~l~~~~~dg~~~~~~~ 334 (355)
T 3vu4_A 299 KLSVDKHVRGCKIAWIS-ESSLVVVWPHTRMIETFKV 334 (355)
T ss_dssp ECCCCTTCCCCEEEESS-SSEEEEEETTTTEEEEEEE
T ss_pred EeccCCCCCceEEEEeC-CCCEEEEEeCCCeEEEEEE
Confidence 01 11122346799999 6668999999999999986
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=3.2e-27 Score=210.36 Aligned_cols=254 Identities=11% Similarity=0.100 Sum_probs=192.2
Q ss_pred ccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEE-EEEECCCeEEEEcCC-CceEEeccCCCCCeeEEEEEecC
Q psy2107 92 SENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWI-LTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYND 167 (391)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l-~t~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~ 167 (391)
.++.+.+|...... ......+...+.+++|+ ++++ ++++.|+.|++||+. ++....+.. ...+.+++| +
T Consensus 10 ~d~~v~v~d~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~-~~~v~~~~~---s 82 (391)
T 1l0q_A 10 ESDNISVIDVTSNK---VTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPA-GSSPQGVAV---S 82 (391)
T ss_dssp TTTEEEEEETTTTE---EEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEEC-SSSEEEEEE---C
T ss_pred CCCEEEEEECCCCe---EEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEEC-CCCccceEE---C
Confidence 45667777653221 12222344568999998 5555 677799999999995 444445544 448999999 7
Q ss_pred CCCeEEE-EEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCCCCCCCCCC
Q psy2107 168 GKDAAFI-SVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQF-ATGGWDCLLKIWSADISKERGDPSEN 245 (391)
Q Consensus 168 ~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~ 245 (391)
+++.+++ +++.++.|++||+. ..+.+..+.. ...+.+++|+|+++.+ ++++.|+.|++||+.+++
T Consensus 83 pdg~~l~~~~~~~~~v~v~d~~----~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~-------- 149 (391)
T 1l0q_A 83 PDGKQVYVTNMASSTLSVIDTT----SNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA-------- 149 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETT----TTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE--------
T ss_pred CCCCEEEEEECCCCEEEEEECC----CCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCc--------
Confidence 7787665 55567999999954 2345555554 4578999999999977 688889999999997633
Q ss_pred CCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eE-EEEECCCeEEEEecccCceeEEEECCeeeEEEEE
Q psy2107 246 GDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EI-ITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHY 323 (391)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~ 323 (391)
....+..+ ..+.+++|++++ .+ ++++.++.|++||+++++....+..+..+.+++|
T Consensus 150 ---------------------~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 207 (391)
T 1l0q_A 150 ---------------------VINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAV 207 (391)
T ss_dssp ---------------------EEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEE
T ss_pred ---------------------EEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEE
Confidence 34445444 456899999766 45 5667899999999999999988888889999999
Q ss_pred CCCCCEEEEee---CCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 324 SPLSKLVITAS---ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 324 ~p~~~~l~~g~---~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+|++++|++++ .++.|++||+++++ ....+..|. .+.+++|+|++..++++++.|+.|++||++
T Consensus 208 ~~~g~~l~~~~~~~~~~~v~~~d~~~~~---~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 208 NPEGTKAYVTNVDKYFNTVSMIDTGTNK---ITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp CTTSSEEEEEEECSSCCEEEEEETTTTE---EEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CCCCCEEEEEecCcCCCcEEEEECCCCe---EEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 99999998887 68999999998765 556666554 479999999665555888999999999974
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=1.7e-27 Score=215.02 Aligned_cols=272 Identities=15% Similarity=0.132 Sum_probs=206.2
Q ss_pred eeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCC---CCcccCCCCcEEEEEec--CCEEEEEECCCeEEEE
Q psy2107 67 QFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPS---PLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIW 141 (391)
Q Consensus 67 ~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iw 141 (391)
...|.++++++.+. ..++.+.+|......... .....+|.+.|.+++|+ +.++++++.|+.|++|
T Consensus 127 ~~~~s~~~~~~~~~----------~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~ 196 (433)
T 3bws_A 127 SVRFIDNTRLAIPL----------LEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVF 196 (433)
T ss_dssp CCEESSSSEEEEEB----------TTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEE
T ss_pred EEEEeCCCeEEEEe----------CCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEE
Confidence 45666666666542 234567777654322111 11344799999999996 6699999999999999
Q ss_pred cCC-CceEEeccCCCCCeeEEEEEecCCCCeEE-EEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEE
Q psy2107 142 TRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAF-ISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQF 219 (391)
Q Consensus 142 d~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l 219 (391)
|+. +.....+..|...+.+++| ++++..+ ++++.|+.|++||++ ....+..+.. ...+.+++|+|+++++
T Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~i~~~d~~----~~~~~~~~~~-~~~~~~~~~~~~g~~l 268 (433)
T 3bws_A 197 DLKTLAYKATVDLTGKWSKILLY---DPIRDLVYCSNWISEDISVIDRK----TKLEIRKTDK-IGLPRGLLLSKDGKEL 268 (433)
T ss_dssp ETTTCCEEEEEECSSSSEEEEEE---ETTTTEEEEEETTTTEEEEEETT----TTEEEEECCC-CSEEEEEEECTTSSEE
T ss_pred ECCCceEEEEEcCCCCCeeEEEE---cCCCCEEEEEecCCCcEEEEECC----CCcEEEEecC-CCCceEEEEcCCCCEE
Confidence 994 5666777789999999999 5566666 555589999999964 3345555554 4569999999999999
Q ss_pred EEEe--------CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-e-E
Q psy2107 220 ATGG--------WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-E-I 289 (391)
Q Consensus 220 ~sg~--------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-l 289 (391)
++++ .||.|++||+++++ ....+ .|...+.+++|++++ . +
T Consensus 269 ~~~~~~~~~~~~~dg~i~~~d~~~~~-----------------------------~~~~~-~~~~~~~~~~~~~~g~~l~ 318 (433)
T 3bws_A 269 YIAQFSASNQESGGGRLGIYSMDKEK-----------------------------LIDTI-GPPGNKRHIVSGNTENKIY 318 (433)
T ss_dssp EEEEEESCTTCSCCEEEEEEETTTTE-----------------------------EEEEE-EEEECEEEEEECSSTTEEE
T ss_pred EEEECCCCccccCCCeEEEEECCCCc-----------------------------EEeec-cCCCCcceEEECCCCCEEE
Confidence 9888 58899999997633 22222 455678899999766 4 4
Q ss_pred EEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeC---------------CCcEEEEcCCCCCcceEEE
Q psy2107 290 ITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASA---------------DKQIRLYDPKVKEGAIVKS 354 (391)
Q Consensus 290 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~---------------dg~i~iwd~~~~~~~~~~~ 354 (391)
++++.|+.|++||+.+++....+.....+.+++|+|+++++++++. ||.|++||+.+++ ...
T Consensus 319 ~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~---~~~ 395 (433)
T 3bws_A 319 VSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT---VKE 395 (433)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE---EEE
T ss_pred EEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc---EEE
Confidence 6668899999999999999988888788999999999998888876 5799999998765 555
Q ss_pred EeccccCcEEEEEECCCCCCEEEEee-CCCcEEEEecC
Q psy2107 355 TFSSHKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDLR 391 (391)
Q Consensus 355 ~~~~h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwdlr 391 (391)
.+.. ...+.+++|+| ++.+|++++ .|+.|++|++.
T Consensus 396 ~~~~-~~~~~~~~~s~-dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 396 FWEA-GNQPTGLDVSP-DNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EEEC-SSSEEEEEECT-TSCEEEEEETTTTEEEEEEET
T ss_pred EecC-CCCCceEEEcC-CCCEEEEEECCCCeEEEEEec
Confidence 5554 45799999999 455666665 59999999974
No 122
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=4.8e-27 Score=203.06 Aligned_cols=230 Identities=15% Similarity=0.328 Sum_probs=180.5
Q ss_pred EEEEEec-CCEEEEEECCCeEEEEcC-CCceEEe--ccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCce
Q psy2107 119 VSAIDFH-NDWILTGCYDHSVHIWTR-RGEHKLN--IPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSI 194 (391)
Q Consensus 119 V~~~~~~-~~~l~t~~~dg~i~iwd~-~~~~~~~--~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 194 (391)
.++|+|+ +++||+| .|++|+|||+ +++.+.. +.+|...|++++| ++++++|++|+.||+|++|+++ ..
T Consensus 28 ~~~l~WS~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~---~~~~~~l~sgs~Dg~v~iw~~~----~~ 99 (318)
T 4ggc_A 28 LNLVDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAW---IKEGNYLAVGTSSAEVQLWDVQ----QQ 99 (318)
T ss_dssp CBCEEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEE---CTTSSEEEEEETTSEEEEEETT----TT
T ss_pred ceEEEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEE---CCCCCEEEEEECCCcEEEeecC----Cc
Confidence 5678998 4566665 5999999999 4555444 4578889999999 7789999999999999999964 44
Q ss_pred eEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc
Q psy2107 195 ECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH 274 (391)
Q Consensus 195 ~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (391)
+++..+.+|...+.++.+ ++..+++|+.++.+++|+..... ..+..+.+|
T Consensus 100 ~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~ 149 (318)
T 4ggc_A 100 KRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAE----------------------------HHVATLSGH 149 (318)
T ss_dssp EEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS----------------------------CEEEEEECC
T ss_pred eeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCc----------------------------eeEEEEcCc
Confidence 678888999998887665 45789999999999999986533 356678899
Q ss_pred cCcccEEEecc-CCeEEEEECCCeEEEEecccCcee----EEE-ECCeeeEEEEECCCCCE---EEEeeCCCcEEEEcCC
Q psy2107 275 KEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMK----SEI-VGNKSFFDVHYSPLSKL---VITASADKQIRLYDPK 345 (391)
Q Consensus 275 ~~~v~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~----~~~-~~~~~i~~~~~~p~~~~---l~~g~~dg~i~iwd~~ 345 (391)
...+..+.+.+ +..+++++.|+.|++||+++++.. ... .....+.+++++|++.. +++++.++.|++||.+
T Consensus 150 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~ 229 (318)
T 4ggc_A 150 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 229 (318)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETT
T ss_pred cCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecc
Confidence 99999999995 456999999999999999877532 222 23447899999998663 3467788999999987
Q ss_pred CCCcceEEEEeccccCcEEEEEECCCCCCEEEE--eeCCCcEEEEecC
Q psy2107 346 VKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVS--ASFDNSVKLWDLR 391 (391)
Q Consensus 346 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s--~~~dg~v~iwdlr 391 (391)
... .. ....+...+..+.|+|.+.. +++ ++.||.|+|||++
T Consensus 230 ~~~---~~-~~~~~~~~v~~~~~~~~~~~-~~~~sg~~d~~i~iwd~~ 272 (318)
T 4ggc_A 230 SGA---CL-SAVDAHSQVCSILWSPHYKE-LISGHGFAQNQLVIWKYP 272 (318)
T ss_dssp TCC---EE-EEEECSSCEEEEEEETTTTE-EEEEECTTTCCEEEEETT
T ss_pred ccc---cc-ccccceeeeeeeeecccccc-eEEEEEcCCCEEEEEECC
Confidence 755 33 33457778999999995554 444 3479999999974
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=9.3e-28 Score=202.07 Aligned_cols=176 Identities=15% Similarity=0.122 Sum_probs=137.7
Q ss_pred CCeEEEEcC--CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCC---CCeEE
Q psy2107 135 DHSVHIWTR--RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHE---RGLET 209 (391)
Q Consensus 135 dg~i~iwd~--~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~---~~v~~ 209 (391)
|+.|++|++ +++.+..+..|...+..++|+|...++.+|++|+.|++|++||+. +.+++.++.+|. ..+.+
T Consensus 156 d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~----TGk~l~tL~g~~~~v~~v~~ 231 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK----TGQLLKKMHIDDSYQASVCH 231 (356)
T ss_dssp TCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT----TCCEEEEEECCC---CCCEE
T ss_pred CCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC----CCcEEEEEcCCCcceeeeEE
Confidence 899999998 366777888899999999997754577899999999999999965 446777887643 46788
Q ss_pred EEEcCCCCEE------------EEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee-----c
Q psy2107 210 VTVSESRQQF------------ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL-----K 272 (391)
Q Consensus 210 l~~~~~~~~l------------~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 272 (391)
++|+|+++++ ++|+.|++|++||..+++. +..+ .
T Consensus 232 vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~-----------------------------l~v~~~~~p~ 282 (356)
T 2w18_A 232 KAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLS-----------------------------VGVMLYCLPP 282 (356)
T ss_dssp EEEEETTEEEEEEC------------CCEEEEEEETTTTEE-----------------------------EEEEEECCCT
T ss_pred EEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEE-----------------------------EEEEEeeccC
Confidence 8999999876 5688899999999987543 2221 3
Q ss_pred CccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe-eeE-EEEECCCCCEEEEeeCCCcEEEEcC
Q psy2107 273 GHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFF-DVHYSPLSKLVITASADKQIRLYDP 344 (391)
Q Consensus 273 ~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~-~~~~~p~~~~l~~g~~dg~i~iwd~ 344 (391)
+|...+.+..++ +..+++++.|++|+|||+.+++++.++.+|. .+. +++|+|+|++|++|+.|++|+|||+
T Consensus 283 Gh~~~~lsg~~s-g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 283 GQAGRFLEGDVK-DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TCCCCEEEEEEE-TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCcceeEccccC-CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 555444333433 4568899999999999999999999998765 344 6899999999999999999999985
No 124
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=4.2e-28 Score=215.95 Aligned_cols=241 Identities=12% Similarity=0.072 Sum_probs=162.4
Q ss_pred CccceEEEEEEeccCC---CCCCcccCCCCcEEEEEec----------CCEEEEEECCCeEEEEcC-CCceEEeccCCCC
Q psy2107 91 SSENVIDVEYLESTPT---PSPLDCILHDDWVSAIDFH----------NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGG 156 (391)
Q Consensus 91 ~~~~~~~~~~~~~~~~---~~~~~~~~h~~~V~~~~~~----------~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~ 156 (391)
+.++.+++|....... .....+.+|.+.|++++|+ +++||+|+.|++|+|||+ ++..+..+..|..
T Consensus 108 ~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~ 187 (393)
T 4gq1_A 108 CQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSS 187 (393)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSS
T ss_pred eCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCC
Confidence 4688999998764322 1123467899999999995 469999999999999998 5667777888999
Q ss_pred CeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCcee---------------------EEEEEecCCCCeEEEEEc-C
Q psy2107 157 PVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE---------------------CIHVCRGHERGLETVTVS-E 214 (391)
Q Consensus 157 ~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~---------------------~~~~~~~~~~~v~~l~~~-~ 214 (391)
+|.+++|+|. +..+|++|+.||+|++||++....... ......+|...+.+++|+ +
T Consensus 188 ~v~~v~~~p~--~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~ 265 (393)
T 4gq1_A 188 PGISVQFRPS--NPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGS 265 (393)
T ss_dssp CEEEEEEETT--EEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETT
T ss_pred CcEEEEECCC--CCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecC
Confidence 9999999553 335899999999999999764321111 111234678889999987 7
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec-cCCe-EEEE
Q psy2107 215 SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-AVDE-IITS 292 (391)
Q Consensus 215 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~-l~s~ 292 (391)
+++.|++++.|+.+++||+..++........... ...............+...+..+.+. .++. +++|
T Consensus 266 dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg 335 (393)
T 4gq1_A 266 DGSGILAMCKSGAWLRWNLFANNDYNEISDSTMK----------LGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAH 335 (393)
T ss_dssp TTCEEEEECTTSEEEEEEC-----------------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEE
T ss_pred CCCEEEEEeCCCCEEEEECccCCCCceEeeecCc----------cccEEEccccccccccCcceeEEEccCCCCEEEEEE
Confidence 9999999999999999999875543221110000 00000011122233333334444443 3444 5667
Q ss_pred ECCCeEEEEecccCceeEEEE-CCeeeEEEEECCCCCEEEEeeCCCcEEEEcC
Q psy2107 293 SWDHTLKIWDAELGGMKSEIV-GNKSFFDVHYSPLSKLVITASADKQIRLYDP 344 (391)
Q Consensus 293 ~~dg~i~iwd~~~~~~~~~~~-~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~ 344 (391)
+.||.|++||+.+++...... ++.+|.+++|+|+|++||+++.+| +.+|.+
T Consensus 336 s~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 336 SQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp TTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred CCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 789999999999988776655 455999999999999999998666 556653
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=4.7e-26 Score=205.62 Aligned_cols=234 Identities=10% Similarity=0.060 Sum_probs=183.8
Q ss_pred CCcEEEEEec--CCEEEEEECCCeEEEEcCC-CceEE-----eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEee
Q psy2107 116 DDWVSAIDFH--NDWILTGCYDHSVHIWTRR-GEHKL-----NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW 187 (391)
Q Consensus 116 ~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~-~~~~~-----~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~ 187 (391)
...+.+++|+ +.++++++.++.|++||+. ++... .+.+|.+.|.+++| ++++.++++++.|+.|++||+
T Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~s~~~d~~v~~~d~ 198 (433)
T 3bws_A 122 GFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISI---PEHNELWVSQMQANAVHVFDL 198 (433)
T ss_dssp SSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEE---GGGTEEEEEEGGGTEEEEEET
T ss_pred CCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEE---cCCCEEEEEECCCCEEEEEEC
Confidence 3445578887 4477777888999999995 44444 34578899999999 668899999999999999996
Q ss_pred cCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEE-EeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107 188 KVESNSIECIHVCRGHERGLETVTVSESRQQFAT-GGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT 266 (391)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s-g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (391)
+ ....+..+..|...+.+++|+|+++.+++ ++.|+.|++||+++++
T Consensus 199 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~----------------------------- 245 (433)
T 3bws_A 199 K----TLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL----------------------------- 245 (433)
T ss_dssp T----TCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE-----------------------------
T ss_pred C----CceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc-----------------------------
Confidence 4 33566777789999999999999998854 4579999999997633
Q ss_pred ceeeecCccCcccEEEeccCC-eEEEEE--------CCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEE-EEeeCC
Q psy2107 267 PLITLKGHKEAISAVQWTAVD-EIITSS--------WDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLV-ITASAD 336 (391)
Q Consensus 267 ~~~~~~~~~~~v~~~~~~~~~-~l~s~~--------~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l-~~g~~d 336 (391)
.+..+.. ...+.+++|+|++ .+++++ .|+.|++||+.+++....+.....+.+++|+|+++.+ ++++.+
T Consensus 246 ~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~ 324 (433)
T 3bws_A 246 EIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCC 324 (433)
T ss_dssp EEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTT
T ss_pred EEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCC
Confidence 3344443 3458899999766 577776 4889999999999888887666788999999999754 666889
Q ss_pred CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeC---------------CCcEEEEecC
Q psy2107 337 KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF---------------DNSVKLWDLR 391 (391)
Q Consensus 337 g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---------------dg~v~iwdlr 391 (391)
+.|++||+.+++ ....+. +...+.+++|+| ++.++++++. ||.|++||++
T Consensus 325 ~~v~v~d~~~~~---~~~~~~-~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~ 389 (433)
T 3bws_A 325 SKIEVYDLKEKK---VQKSIP-VFDKPNTIALSP-DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTT 389 (433)
T ss_dssp TEEEEEETTTTE---EEEEEE-CSSSEEEEEECT-TSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETT
T ss_pred CEEEEEECCCCc---EEEEec-CCCCCCeEEEcC-CCCEEEEEecCCCccccccccccccceEEEEEECC
Confidence 999999998654 444544 677899999999 5556666665 5799999973
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=2.5e-25 Score=198.12 Aligned_cols=220 Identities=12% Similarity=0.088 Sum_probs=173.0
Q ss_pred EEEEEECCCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCeEE-EEEeCCCcEEEEeecCCCCceeEEEEEecCCC
Q psy2107 128 WILTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAF-ISVSTDQTAMIWEWKVESNSIECIHVCRGHER 205 (391)
Q Consensus 128 ~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 205 (391)
++++++.|+.|++||+. ++....+..| ..+.+++| ++++.++ ++++.|+.|++||+. ..+.+..+..+.
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~-~~~~~~~~---s~dg~~l~~~~~~d~~i~v~d~~----~~~~~~~~~~~~- 74 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVI---SPDGTKVYVANAHSNDVSIIDTA----TNNVIATVPAGS- 74 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEE---CTTSSEEEEEEGGGTEEEEEETT----TTEEEEEEECSS-
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecC-CCcceEEE---CCCCCEEEEECCCCCeEEEEECC----CCeEEEEEECCC-
Confidence 67888999999999995 4555555555 45899999 7778765 677799999999954 335566666554
Q ss_pred CeEEEEEcCCCCEEEEE-eCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec
Q psy2107 206 GLETVTVSESRQQFATG-GWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT 284 (391)
Q Consensus 206 ~v~~l~~~~~~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 284 (391)
.+.+++|+|++++|+.+ +.++.|++||+.+++ .+..+.. ...+.+++|+
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~-----------------------------~~~~~~~-~~~~~~~~~s 124 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT-----------------------------VAGTVKT-GKSPLGLALS 124 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-----------------------------EEEEEEC-SSSEEEEEEC
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCe-----------------------------EEEEEeC-CCCcceEEEC
Confidence 89999999999987554 567999999997633 3444443 4567999999
Q ss_pred cCCe-E-EEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEE-EEeeCCCcEEEEcCCCCCcceEEEEeccccC
Q psy2107 285 AVDE-I-ITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLV-ITASADKQIRLYDPKVKEGAIVKSTFSSHKE 361 (391)
Q Consensus 285 ~~~~-l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l-~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~ 361 (391)
+++. + ++++.++.|++||+.+++.+..+..+..+.+++|+|+++++ ++++.++.|++||+++.+ ....+. +..
T Consensus 125 ~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~---~~~~~~-~~~ 200 (391)
T 1l0q_A 125 PDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS---VIDTVK-VEA 200 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE---EEEEEE-CSS
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCe---EEEEEe-cCC
Confidence 7654 5 67778999999999999999999888888999999999987 577788999999998764 444443 566
Q ss_pred cEEEEEECCCCCCEEEEee---CCCcEEEEecC
Q psy2107 362 WVQSVRWSPIDPQLFVSAS---FDNSVKLWDLR 391 (391)
Q Consensus 362 ~v~~~~~~~~~~~~l~s~~---~dg~v~iwdlr 391 (391)
.+.+++|+|+ +.++++++ .++.|++||++
T Consensus 201 ~~~~~~~~~~-g~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 201 APSGIAVNPE-GTKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp EEEEEEECTT-SSEEEEEEECSSCCEEEEEETT
T ss_pred CccceEECCC-CCEEEEEecCcCCCcEEEEECC
Confidence 8999999994 45566665 78999999974
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=1.5e-25 Score=200.69 Aligned_cols=252 Identities=11% Similarity=0.092 Sum_probs=189.0
Q ss_pred eEEEEEE--eccCCCCCCcccCCCCcEEEEEec----------------CCEEEEEECC------CeEEEEcCCCceEEe
Q psy2107 95 VIDVEYL--ESTPTPSPLDCILHDDWVSAIDFH----------------NDWILTGCYD------HSVHIWTRRGEHKLN 150 (391)
Q Consensus 95 ~~~~~~~--~~~~~~~~~~~~~h~~~V~~~~~~----------------~~~l~t~~~d------g~i~iwd~~~~~~~~ 150 (391)
.+++|.. ..........+.+|...+..+++. +..++.++.+ +.|++||+++.....
T Consensus 94 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~ 173 (415)
T 2hqs_A 94 AYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFV 173 (415)
T ss_dssp EEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEE
T ss_pred EEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEE
Confidence 6788876 433221123456677777776654 5667666654 799999998877888
Q ss_pred ccCCCCCeeEEEEEecCCCCeEEEEEeCCC---cEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEE-EEeCCC
Q psy2107 151 IPGHGGPVKGVAWLYNDGKDAAFISVSTDQ---TAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFA-TGGWDC 226 (391)
Q Consensus 151 ~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-sg~~dg 226 (391)
+..|...+.+++| +|+++.|++++.++ .|++||+. +. +. ..+..|...+.+++|+|+|+.|+ +++.++
T Consensus 174 l~~~~~~v~~~~~---Spdg~~la~~s~~~~~~~i~~~d~~--tg--~~-~~l~~~~~~~~~~~~spdg~~la~~~~~~g 245 (415)
T 2hqs_A 174 VHRSPQPLMSPAW---SPDGSKLAYVTFESGRSALVIQTLA--NG--AV-RQVASFPRHNGAPAFSPDGSKLAFALSKTG 245 (415)
T ss_dssp EEEESSCEEEEEE---CTTSSEEEEEECTTSSCEEEEEETT--TC--CE-EEEECCSSCEEEEEECTTSSEEEEEECTTS
T ss_pred EeCCCCcceeeEE---cCCCCEEEEEEecCCCcEEEEEECC--CC--cE-EEeecCCCcccCEEEcCCCCEEEEEEecCC
Confidence 8889999999999 78899999999885 99999965 32 22 34567888999999999999887 666665
Q ss_pred c--EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEEC-CC--eEEE
Q psy2107 227 L--LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSW-DH--TLKI 300 (391)
Q Consensus 227 ~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~-dg--~i~i 300 (391)
. |++||+.+++ ...+..|...+.+++|+|++. |++++. ++ .|.+
T Consensus 246 ~~~i~~~d~~~~~------------------------------~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~ 295 (415)
T 2hqs_A 246 SLNLYVMDLASGQ------------------------------IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK 295 (415)
T ss_dssp SCEEEEEETTTCC------------------------------EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred CceEEEEECCCCC------------------------------EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEE
Confidence 5 9999987522 345667788899999997765 776765 44 6888
Q ss_pred EecccCceeEEEECCeeeEEEEECCCCCEEEEeeCC---CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEE
Q psy2107 301 WDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD---KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFV 377 (391)
Q Consensus 301 wd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d---g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 377 (391)
||+.+++..........+.+++|+|+|++|++++.+ ..|++||+.+++ . ..+..|. .+.+++|+| ++.+|+
T Consensus 296 ~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~---~-~~l~~~~-~~~~~~~sp-dg~~l~ 369 (415)
T 2hqs_A 296 VNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG---V-QVLSSTF-LDETPSLAP-NGTMVI 369 (415)
T ss_dssp EETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC---E-EECCCSS-SCEEEEECT-TSSEEE
T ss_pred EECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC---E-EEecCCC-CcCCeEEcC-CCCEEE
Confidence 899887754333334578899999999999988764 589999998765 3 3455554 899999999 556677
Q ss_pred EeeCCC---cEEEEec
Q psy2107 378 SASFDN---SVKLWDL 390 (391)
Q Consensus 378 s~~~dg---~v~iwdl 390 (391)
+++.|+ .|++||+
T Consensus 370 ~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 370 YSSSQGMGSVLNLVST 385 (415)
T ss_dssp EEEEETTEEEEEEEET
T ss_pred EEEcCCCccEEEEEEC
Confidence 777766 7999986
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=3.7e-22 Score=178.60 Aligned_cols=232 Identities=10% Similarity=0.051 Sum_probs=177.8
Q ss_pred ceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCC---eEEEEcCCCceEEeccCCCCCeeEEEEEecCC
Q psy2107 94 NVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDH---SVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDG 168 (391)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg---~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~ 168 (391)
..+.+|... ......+.+|...|.+++|+ |+.|++++.++ .|++||+.+.....+..|...+.+++| +|
T Consensus 159 ~~i~i~d~~---g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~---sp 232 (415)
T 2hqs_A 159 YELRVSDYD---GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAF---SP 232 (415)
T ss_dssp EEEEEEETT---SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEE---CT
T ss_pred ceEEEEcCC---CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEE---cC
Confidence 566666653 22345566799999999998 66999999885 999999966666677788899999999 77
Q ss_pred CCeEEE-EEeCCCc--EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC-CC--cEEEEECCCCCCCCCC
Q psy2107 169 KDAAFI-SVSTDQT--AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW-DC--LLKIWSADISKERGDP 242 (391)
Q Consensus 169 ~~~~l~-s~~~dg~--v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg--~i~iwd~~~~~~~~~~ 242 (391)
+++.|+ +++.++. |++||+. +.. ...+..|...+.+++|+|+++.|++++. ++ .|.+||+.+++
T Consensus 233 dg~~la~~~~~~g~~~i~~~d~~--~~~---~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~----- 302 (415)
T 2hqs_A 233 DGSKLAFALSKTGSLNLYVMDLA--SGQ---IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA----- 302 (415)
T ss_dssp TSSEEEEEECTTSSCEEEEEETT--TCC---EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC-----
T ss_pred CCCEEEEEEecCCCceEEEEECC--CCC---EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC-----
Confidence 888777 6666665 7888854 322 2456678889999999999999988886 45 57777876532
Q ss_pred CCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECC---CeEEEEecccCceeEEEECCeee
Q psy2107 243 SENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWD---HTLKIWDAELGGMKSEIVGNKSF 318 (391)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~i 318 (391)
...+..+...+.+++|+|++. |++++.+ ..|++||+.+++.. .+..+..+
T Consensus 303 -------------------------~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~~~ 356 (415)
T 2hqs_A 303 -------------------------PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTFLD 356 (415)
T ss_dssp -------------------------CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSSSC
T ss_pred -------------------------EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCCCc
Confidence 223445667788999997665 6666653 58999999988774 34444588
Q ss_pred EEEEECCCCCEEEEeeCCC---cEEEEcCCCCCcceEEEEeccccCcEEEEEECCC
Q psy2107 319 FDVHYSPLSKLVITASADK---QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI 371 (391)
Q Consensus 319 ~~~~~~p~~~~l~~g~~dg---~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 371 (391)
.+++|+|+|++|++++.++ .|++||+... ....+.+|.+.|.+++|+|.
T Consensus 357 ~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~----~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 357 ETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR----FKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp EEEEECTTSSEEEEEEEETTEEEEEEEETTSC----CEEECCCSSSEEEEEEECCC
T ss_pred CCeEEcCCCCEEEEEEcCCCccEEEEEECCCC----cEEEeeCCCCCCcCCccccc
Confidence 9999999999999888777 7999998643 35678889999999999993
No 129
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=4e-23 Score=185.52 Aligned_cols=223 Identities=13% Similarity=0.117 Sum_probs=155.3
Q ss_pred CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC-------CCceeEE----EEEecCC
Q psy2107 136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE-------SNSIECI----HVCRGHE 204 (391)
Q Consensus 136 g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-------~~~~~~~----~~~~~~~ 204 (391)
+.+++|+.... .....+..+++ ++++.++++++.|+ +++|+.... ....... .....+.
T Consensus 23 ~~vri~~~~~~------~~~~~~n~lav---s~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (434)
T 2oit_A 23 KKVRIFDSPEE------LPKERSSLLAV---SNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMK 92 (434)
T ss_dssp CEEECSCCCSS------CCCSCCBCEEE---ETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCS
T ss_pred eeEEecCCccc------cCCCCccEEEE---ecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCC
Confidence 56888775322 12446788999 55677899999888 888874310 0000100 0112356
Q ss_pred CCeEEEEEcCCCCEEE----EEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccE
Q psy2107 205 RGLETVTVSESRQQFA----TGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISA 280 (391)
Q Consensus 205 ~~v~~l~~~~~~~~l~----sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 280 (391)
..|.+++|+|++++|+ +|+.|+.|++||+++...... ...........+.+|...|.+
T Consensus 93 ~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~------------------~~~~~~~~~~~~~~h~~~V~~ 154 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAK------------------QQKRPFAYHKLLKDAGGMVID 154 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTC------------------SSCCCSEEEECCCSGGGSEEE
T ss_pred CcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCc------------------CCcceeeeeeccCCCCCceEE
Confidence 7899999999999999 788999999999865310000 000001124456679999999
Q ss_pred EEeccC--CeEEEEECCCeEEEEecccCceeEEEECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec
Q psy2107 281 VQWTAV--DEIITSSWDHTLKIWDAELGGMKSEIVGN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS 357 (391)
Q Consensus 281 ~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~ 357 (391)
++|+|. ..|++++.||+|++||++++........+ ..+.+++|+|+|++|++|+.||.|++||++ +. ....+.
T Consensus 155 v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~---~~~~~~ 230 (434)
T 2oit_A 155 MKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ---EKKVIP 230 (434)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CC---EEEEEC
T ss_pred EEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cc---cccccc
Confidence 999964 46999999999999999998766555544 489999999999999999999999999987 33 223333
Q ss_pred c-------ccCcEEEEEECCCCCCEE-EEeeCCCc------EEEEecC
Q psy2107 358 S-------HKEWVQSVRWSPIDPQLF-VSASFDNS------VKLWDLR 391 (391)
Q Consensus 358 ~-------h~~~v~~~~~~~~~~~~l-~s~~~dg~------v~iwdlr 391 (391)
. |...|.+++|++ +..++ ++++.||. +++|+++
T Consensus 231 ~~~~~~~~~~~~v~~v~w~~-~~~~l~~~~~~dg~~~~~~~v~i~~l~ 277 (434)
T 2oit_A 231 CPPFYESDHPVRVLDVLWIG-TYVFAIVYAAADGTLETSPDVVMALLP 277 (434)
T ss_dssp CCTTCCTTSCEEEEEEEEEE-TTEEEEEEEETTCCSSSCCEEEEEECC
T ss_pred CCcccCCCCceeEEEEEEec-CceEEEEEccCCCccCCCCceEEEEec
Confidence 2 234899999999 44444 34445543 8899985
No 130
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=9.7e-22 Score=171.49 Aligned_cols=264 Identities=8% Similarity=0.114 Sum_probs=175.4
Q ss_pred ccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECC-CeEEEEcCC--Cce---EEeccCCCCCeeEEEE
Q psy2107 92 SENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYD-HSVHIWTRR--GEH---KLNIPGHGGPVKGVAW 163 (391)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~d-g~i~iwd~~--~~~---~~~~~~~~~~v~~l~~ 163 (391)
.++.+.+|...............|...+.+++|+ +++|++++.+ +.|.+|+++ +.. +..+..+ ..+..++|
T Consensus 13 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 91 (343)
T 1ri6_A 13 ESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHIST 91 (343)
T ss_dssp GGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEE
T ss_pred CCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEE
Confidence 3566777766421111223334577788889997 6688888876 999999985 322 2233333 37889999
Q ss_pred EecCCCCeEEEEEeC-CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCC-CCCCC
Q psy2107 164 LYNDGKDAAFISVST-DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG-WDCLLKIWSADI-SKERG 240 (391)
Q Consensus 164 ~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~-~~~~~ 240 (391)
+++++++++++. ++.|.+||+. ..........+.. ...+.+++|+|+++++++++ .++.|.+||+.+ ++.
T Consensus 92 ---s~dg~~l~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~-- 164 (343)
T 1ri6_A 92 ---DHQGQFVFVGSYNAGNVSVTRLE-DGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL-- 164 (343)
T ss_dssp ---CTTSSEEEEEETTTTEEEEEEEE-TTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE--
T ss_pred ---cCCCCEEEEEecCCCeEEEEECC-CCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce--
Confidence 778887766654 8899999975 2223344455544 34689999999999888887 899999999975 221
Q ss_pred CCCCCCCCCccccccccccccCCCCCcee--eec-CccCcccEEEeccCCe-EEEEE-CCCeEEEEeccc--Cce--eEE
Q psy2107 241 DPSENGDEGTTSKKRKKEYSSASSRTPLI--TLK-GHKEAISAVQWTAVDE-IITSS-WDHTLKIWDAEL--GGM--KSE 311 (391)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~v~~~~~~~~~~-l~s~~-~dg~i~iwd~~~--~~~--~~~ 311 (391)
.... ... .....+..++|+|++. +++++ .++.|.+||+.. ++. ...
T Consensus 165 -------------------------~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~ 219 (343)
T 1ri6_A 165 -------------------------VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQT 219 (343)
T ss_dssp -------------------------EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEE
T ss_pred -------------------------eeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEee
Confidence 0111 122 2234677899997765 55554 789999999953 433 222
Q ss_pred EE---C----CeeeEEEEECCCCCEEEE-eeCCCcEEEEcCCCCCc-ceEEEEeccccCcEEEEEECCCCCCEEEEee-C
Q psy2107 312 IV---G----NKSFFDVHYSPLSKLVIT-ASADKQIRLYDPKVKEG-AIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS-F 381 (391)
Q Consensus 312 ~~---~----~~~i~~~~~~p~~~~l~~-g~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~ 381 (391)
.. . ...+..++|+|++++|++ +..++.|.+||+..... ...+..+..+.. +.+++|+|++ .+|++++ .
T Consensus 220 ~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg-~~l~~~~~~ 297 (343)
T 1ri6_A 220 LDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSG-KYLIAAGQK 297 (343)
T ss_dssp EECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTS-SEEEEECTT
T ss_pred ccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCC-CEEEEecCC
Confidence 22 1 124668999999998774 44789999999873221 224444444444 8999999955 4455554 7
Q ss_pred CCcEEEEec
Q psy2107 382 DNSVKLWDL 390 (391)
Q Consensus 382 dg~v~iwdl 390 (391)
++.|.+|++
T Consensus 298 ~~~v~v~~~ 306 (343)
T 1ri6_A 298 SHHISVYEI 306 (343)
T ss_dssp TCEEEEEEE
T ss_pred CCeEEEEEE
Confidence 899999954
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=1.1e-21 Score=167.40 Aligned_cols=250 Identities=14% Similarity=0.103 Sum_probs=178.6
Q ss_pred ccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCC-c-eEEeccCC-CCCeeEEEEEec
Q psy2107 92 SENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRG-E-HKLNIPGH-GGPVKGVAWLYN 166 (391)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~-~-~~~~~~~~-~~~v~~l~~~~~ 166 (391)
.+..+.+|.... .....+..|...|.+++|+ +++|++++ ++.|++||+.+ . .......+ ...+.+++|
T Consensus 20 ~~~~i~~~d~~~---~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~--- 92 (297)
T 2ojh_A 20 MRSSIEIFNIRT---RKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGI--- 92 (297)
T ss_dssp CCEEEEEEETTT---TEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEE---
T ss_pred cceeEEEEeCCC---CceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEE---
Confidence 456666665432 1233455688899999998 66888876 78999999955 4 44344444 477899999
Q ss_pred CCCCeEEEEEe--CCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCCCCCCCC
Q psy2107 167 DGKDAAFISVS--TDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFA-TGGWDCLLKIWSADISKERGDPS 243 (391)
Q Consensus 167 ~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~ 243 (391)
++++.++++++ .++...+|.++..... ...+.. ...+.+++|+|+++.|+ +++.++.+++|+++...
T Consensus 93 spdg~~l~~~~~~~~~~~~l~~~~~~~~~---~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~------ 162 (297)
T 2ojh_A 93 SPDGALYAISDKVEFGKSAIYLLPSTGGT---PRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS------ 162 (297)
T ss_dssp CTTSSEEEEEECTTTSSCEEEEEETTCCC---CEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTT------
T ss_pred CCCCCEEEEEEeCCCCcceEEEEECCCCc---eEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCC------
Confidence 77899999998 4567888877654433 233333 33589999999999887 78889999999975311
Q ss_pred CCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEE-CCCeEEEEecc-cCceeEEEECC-eeeE
Q psy2107 244 ENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSS-WDHTLKIWDAE-LGGMKSEIVGN-KSFF 319 (391)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~-~dg~i~iwd~~-~~~~~~~~~~~-~~i~ 319 (391)
.....+..+...+.+++|+|++. ++.++ .++.+++|++. .+.....+..+ ..+.
T Consensus 163 ----------------------~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 220 (297)
T 2ojh_A 163 ----------------------GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDW 220 (297)
T ss_dssp ----------------------CCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEE
T ss_pred ----------------------CcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccC
Confidence 12345556778899999997665 55555 58999999986 45555555443 4788
Q ss_pred EEEECCCCCEEEEeeCC-----------CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCC
Q psy2107 320 DVHYSPLSKLVITASAD-----------KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD 382 (391)
Q Consensus 320 ~~~~~p~~~~l~~g~~d-----------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 382 (391)
.++|+|++++|++++.+ +.|++||+..++.. .+..+.+|...+.+++|+|++ ..|++++.|
T Consensus 221 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~ 292 (297)
T 2ojh_A 221 FPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVE-TLFDLFGGQGTMNSPNWSPDG-DEFAYVRYF 292 (297)
T ss_dssp EEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCE-EEEEEEESTTTSCSCCBCTTS-SEEEEEEEC
T ss_pred CeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCce-eeeccCCCCcccccceECCCC-CEEEEEEec
Confidence 99999999999888765 56999999876522 344455788899999999954 556666554
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=4.2e-21 Score=167.46 Aligned_cols=233 Identities=8% Similarity=0.169 Sum_probs=162.8
Q ss_pred EEEEEECCCeEEEEcCC--Cc-eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC-CcEEEEeecCCCCceeEEEEEecC
Q psy2107 128 WILTGCYDHSVHIWTRR--GE-HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD-QTAMIWEWKVESNSIECIHVCRGH 203 (391)
Q Consensus 128 ~l~t~~~dg~i~iwd~~--~~-~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d-g~v~iwd~~~~~~~~~~~~~~~~~ 203 (391)
++++++.|+.|++|+++ +. .......+...+.+++| +++++++++++.+ +.|.+|+++........+..+..+
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 83 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVV---SPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 83 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEE---CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEE---CCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC
Confidence 34455789999999984 32 22333457788999999 7788888888876 999999986445555566666654
Q ss_pred CCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEE
Q psy2107 204 ERGLETVTVSESRQQFATGGW-DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQ 282 (391)
Q Consensus 204 ~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 282 (391)
. .+..++|+|++++|++++. ++.|.+||+..+.. ......+.. ...+.+++
T Consensus 84 ~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~--------------------------~~~~~~~~~-~~~~~~~~ 135 (343)
T 1ri6_A 84 G-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLP--------------------------VGVVDVVEG-LDGCHSAN 135 (343)
T ss_dssp S-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEE--------------------------EEEEEEECC-CTTBCCCE
T ss_pred C-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcc--------------------------ccccccccC-CCCceEEE
Confidence 4 7899999999998877665 88899999942111 122333333 34588899
Q ss_pred eccCC-eEEEEE-CCCeEEEEeccc-CceeE----EEE--CCeeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCcce-
Q psy2107 283 WTAVD-EIITSS-WDHTLKIWDAEL-GGMKS----EIV--GNKSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEGAI- 351 (391)
Q Consensus 283 ~~~~~-~l~s~~-~dg~i~iwd~~~-~~~~~----~~~--~~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~- 351 (391)
|+|++ .+++++ .++.|++||+.+ ++... ... ....+..++|+|++++++++ ..++.|.+|++....+..
T Consensus 136 ~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~ 215 (343)
T 1ri6_A 136 ISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIE 215 (343)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCE
T ss_pred ECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEE
Confidence 99766 477766 899999999987 65432 222 23467889999999977655 478999999986422211
Q ss_pred EEEEec---cc---cCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 352 VKSTFS---SH---KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 352 ~~~~~~---~h---~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
...... .. ...+.+++|+|++..+++++..++.|.+||++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 216 CVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 122221 11 24577899999665555577789999999974
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=8e-21 Score=175.19 Aligned_cols=226 Identities=11% Similarity=0.066 Sum_probs=169.9
Q ss_pred cCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC
Q psy2107 125 HNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH 203 (391)
Q Consensus 125 ~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 203 (391)
.+.++++++.|++|.+||. +++.+..+..+.. +..++| +++++++++++.|++|.+||+. ..+.+.+..+. +
T Consensus 148 ~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~---spdg~~l~v~~~d~~V~v~D~~--~~t~~~~~~i~-~ 220 (543)
T 1nir_A 148 PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRM---SASGRYLLVIGRDARIDMIDLW--AKEPTKVAEIK-I 220 (543)
T ss_dssp GGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEE---CTTSCEEEEEETTSEEEEEETT--SSSCEEEEEEE-C
T ss_pred CCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEE---CCCCCEEEEECCCCeEEEEECc--CCCCcEEEEEe-c
Confidence 3668889999999999999 4566666663323 889999 8899999999999999999962 12345667776 4
Q ss_pred CCCeEEEEEcC----CCCEEEEEeC-CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC-----
Q psy2107 204 ERGLETVTVSE----SRQQFATGGW-DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG----- 273 (391)
Q Consensus 204 ~~~v~~l~~~~----~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 273 (391)
...+..++|+| +++++++++. ++.|.+||..+.+ ++..+..
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~-----------------------------~~~~i~~~g~~~ 271 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE-----------------------------PKQIVSTRGMTV 271 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC-----------------------------EEEEEECCEECS
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc-----------------------------cceeecccCccc
Confidence 55689999999 9999999884 8999999987643 3333332
Q ss_pred -----c-cCcccEEEeccC-Ce-EEEEECCCeEEEEecccCceeE--EEECCeeeEEEEECCCCCEEEEe-eCCCcEEEE
Q psy2107 274 -----H-KEAISAVQWTAV-DE-IITSSWDHTLKIWDAELGGMKS--EIVGNKSFFDVHYSPLSKLVITA-SADKQIRLY 342 (391)
Q Consensus 274 -----~-~~~v~~~~~~~~-~~-l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~i~~~~~~p~~~~l~~g-~~dg~i~iw 342 (391)
| ...+..+.++++ .. +++...++.|.+||+.+.+.+. .+.....+..++|+|+|++++++ ..++.|.+|
T Consensus 272 ~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~ 351 (543)
T 1nir_A 272 DTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVI 351 (543)
T ss_dssp SSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEE
T ss_pred CccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEE
Confidence 2 236788999964 34 5666789999999998876554 55555567889999999977655 468999999
Q ss_pred cCCCCCcceEEEEecc----ccCcEEEEEECCCCCCEEEEee-CCCcEEEEec
Q psy2107 343 DPKVKEGAIVKSTFSS----HKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDL 390 (391)
Q Consensus 343 d~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwdl 390 (391)
|+.+++ +...+.. |.+....+ ++|+++.+++|+. .|++|.+||+
T Consensus 352 D~~tg~---l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~ 400 (543)
T 1nir_A 352 DSKDRR---LSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGT 400 (543)
T ss_dssp ETTTTE---EEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEEC
T ss_pred ECCCCe---EEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEe
Confidence 998765 5555543 65444443 5776677788876 6899999996
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=7.5e-22 Score=190.27 Aligned_cols=231 Identities=8% Similarity=0.027 Sum_probs=170.4
Q ss_pred cEEEEEec--CCEEEEEECCCeEEEEcCCCc---eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCC
Q psy2107 118 WVSAIDFH--NDWILTGCYDHSVHIWTRRGE---HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN 192 (391)
Q Consensus 118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 192 (391)
.|.+++|+ |++|++++. +.|++||+.+. ....+..|...+.+++| +|++++|+.++ ++.|++||+. +.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~---SPDG~~la~~~-~~~i~~~d~~--~g 182 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKL---SPKGGFVSFIR-GRNLWVIDLA--SG 182 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEE---CTTSSEEEEEE-TTEEEEEETT--TT
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccC---CCCCCEEEEEe-CCcEEEEecC--CC
Confidence 47788888 668888886 99999999766 67778888899999999 88899999887 5689999954 22
Q ss_pred ceeEEEEEecCCCC----------------eEEEEEcCCCCEEEEEeCCC------------------------------
Q psy2107 193 SIECIHVCRGHERG----------------LETVTVSESRQQFATGGWDC------------------------------ 226 (391)
Q Consensus 193 ~~~~~~~~~~~~~~----------------v~~l~~~~~~~~l~sg~~dg------------------------------ 226 (391)
........+... +.+++|+|+|++|++++.|+
T Consensus 183 --~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~ 260 (741)
T 2ecf_A 183 --RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDAN 260 (741)
T ss_dssp --EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCC
T ss_pred --CEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCC
Confidence 222222223222 47899999999999988765
Q ss_pred ---cEEEEECCC-CCCCCCCCCCCCCCccccccccccccCCCCCceeee--cCccCcccEEEeccCCe-EEEEEC-----
Q psy2107 227 ---LLKIWSADI-SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL--KGHKEAISAVQWTAVDE-IITSSW----- 294 (391)
Q Consensus 227 ---~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~-l~s~~~----- 294 (391)
.|.+||+.+ ++. .... ..|...+..++| |++. |++++.
T Consensus 261 ~~~~l~~~d~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~ 310 (741)
T 2ecf_A 261 VQVKLGVISPAEQAQT-----------------------------QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQK 310 (741)
T ss_dssp CEEEEEEECSSTTCCC-----------------------------EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSS
T ss_pred CeeEEEEEECCCCCce-----------------------------EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCC
Confidence 667777654 332 1111 146778899999 8876 555443
Q ss_pred CCeEEEEecccCceeEEEECCe-----eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEE-EE
Q psy2107 295 DHTLKIWDAELGGMKSEIVGNK-----SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSV-RW 368 (391)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~~~-----~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~-~~ 368 (391)
+..|++||+.+++....+..+. .+..++|+|+|+++++++.+|.++||.+..... ...+..|...|..+ .|
T Consensus 311 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~---~~~l~~~~~~v~~~~~~ 387 (741)
T 2ecf_A 311 KLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK---AAALTHGNWSVDELLAV 387 (741)
T ss_dssp EEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC---EEESCCSSSCEEEEEEE
T ss_pred eEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC---eeeeeecceEEEeEeEE
Confidence 5789999999998776665433 346899999999999999999888887653322 45677788888887 59
Q ss_pred CCCCCCEEEEeeCCC--cEEEEec
Q psy2107 369 SPIDPQLFVSASFDN--SVKLWDL 390 (391)
Q Consensus 369 ~~~~~~~l~s~~~dg--~v~iwdl 390 (391)
+|++..++++++.++ .++||++
T Consensus 388 s~dg~~l~~~~~~~~~~~~~l~~~ 411 (741)
T 2ecf_A 388 DEKAGLAYFRAGIESARESQIYAV 411 (741)
T ss_dssp ETTTTEEEEEECSSCTTCBEEEEE
T ss_pred eCCCCEEEEEEeCCCCceEEEEEE
Confidence 996655556677666 8999985
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=1.4e-20 Score=163.42 Aligned_cols=242 Identities=8% Similarity=0.024 Sum_probs=166.4
Q ss_pred CCCcEEEEEec--CCEEEEEEC-CCeEEEEcCCC-ce-EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCC---cEEEEe
Q psy2107 115 HDDWVSAIDFH--NDWILTGCY-DHSVHIWTRRG-EH-KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQ---TAMIWE 186 (391)
Q Consensus 115 h~~~V~~~~~~--~~~l~t~~~-dg~i~iwd~~~-~~-~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg---~v~iwd 186 (391)
+...+ +++|+ ++++++++. ++.|.+||... .. ...+..+..+..+++| ++++++++++..++ .|.+||
T Consensus 39 ~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~---s~dg~~l~~~~~~~~~~~i~v~d 114 (331)
T 3u4y_A 39 GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDI---TPDDQFAVTVTGLNHPFNMQSYS 114 (331)
T ss_dssp CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEE---CTTSSEEEECCCSSSSCEEEEEE
T ss_pred cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEE---CCCCCEEEEecCCCCcccEEEEE
Confidence 44556 88887 565666555 89999999944 43 5556666666666999 77898888655553 899999
Q ss_pred ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEE-EeCCCc-EEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107 187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFAT-GGWDCL-LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS 264 (391)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s-g~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (391)
+. ..+.+..+.. .....+++|+|+++++++ ...++. |.+|+++...... .
T Consensus 115 ~~----~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~-----------------------~ 166 (331)
T 3u4y_A 115 FL----KNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLF-----------------------D 166 (331)
T ss_dssp TT----TTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEE-----------------------E
T ss_pred CC----CCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEe-----------------------e
Confidence 54 2344555554 445789999999985554 456688 9999997422100 0
Q ss_pred CCceeeecCccCcccEEEeccCCe-EEEE-ECCCeEEEEecccCce---eEEEECCeeeEEEEECCCCCEEEEee-CCCc
Q psy2107 265 RTPLITLKGHKEAISAVQWTAVDE-IITS-SWDHTLKIWDAELGGM---KSEIVGNKSFFDVHYSPLSKLVITAS-ADKQ 338 (391)
Q Consensus 265 ~~~~~~~~~~~~~v~~~~~~~~~~-l~s~-~~dg~i~iwd~~~~~~---~~~~~~~~~i~~~~~~p~~~~l~~g~-~dg~ 338 (391)
. ....+ ........++|+|++. ++++ ..++.|++||+.+++. +..+.....+..++|+|+|+++++++ .++.
T Consensus 167 ~-~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 244 (331)
T 3u4y_A 167 T-GQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVD 244 (331)
T ss_dssp E-EEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEE
T ss_pred c-CCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCE
Confidence 0 01111 2344578999997774 5554 4689999999999998 88888777888999999999776554 5788
Q ss_pred EEEEcCCCCCcceEEEEeccc----c---CcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 339 IRLYDPKVKEGAIVKSTFSSH----K---EWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 339 i~iwd~~~~~~~~~~~~~~~h----~---~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
|.+||+.+++... +..+..+ . .....++|+|++..+++++..++.|.+||+.
T Consensus 245 i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~ 303 (331)
T 3u4y_A 245 VFNFNQLSGTLSF-VKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTIS 303 (331)
T ss_dssp EEEEETTTTEEEE-EEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred EEEEECCCCceee-ecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEec
Confidence 9999998755211 2222222 2 2235689999665555666777899999973
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=1.7e-21 Score=166.14 Aligned_cols=221 Identities=14% Similarity=0.084 Sum_probs=159.1
Q ss_pred EECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC-CCCeEEE
Q psy2107 132 GCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH-ERGLETV 210 (391)
Q Consensus 132 ~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~v~~l 210 (391)
++.|+.|++||+.+.....+..|...|.+++| ++++.+|++++ ++.|.+||+... . ........+ ...+.++
T Consensus 18 ~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~---spdg~~l~~~~-~~~i~~~d~~~~-~--~~~~~~~~~~~~~~~~~ 90 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRVVWQTPELFEAPNW---SPDGKYLLLNS-EGLLYRLSLAGD-P--SPEKVDTGFATICNNDH 90 (297)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEESSCCEEEEE---CTTSSEEEEEE-TTEEEEEESSSC-C--SCEECCCTTCCCBCSCC
T ss_pred CCcceeEEEEeCCCCceeeeccCCcceEeeEE---CCCCCEEEEEc-CCeEEEEeCCCC-C--CceEeccccccccccce
Confidence 45789999999977777777789999999999 77899999877 889999996520 2 223333444 4678999
Q ss_pred EEcCCCCEEEEEe--CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe
Q psy2107 211 TVSESRQQFATGG--WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE 288 (391)
Q Consensus 211 ~~~~~~~~l~sg~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 288 (391)
+|+|++++|++++ .++...+|.++... . ....+..+ ..+..++|+|++.
T Consensus 91 ~~spdg~~l~~~~~~~~~~~~l~~~~~~~---------------------------~-~~~~~~~~-~~~~~~~~spdg~ 141 (297)
T 2ojh_A 91 GISPDGALYAISDKVEFGKSAIYLLPSTG---------------------------G-TPRLMTKN-LPSYWHGWSPDGK 141 (297)
T ss_dssp EECTTSSEEEEEECTTTSSCEEEEEETTC---------------------------C-CCEECCSS-SSEEEEEECTTSS
T ss_pred EECCCCCEEEEEEeCCCCcceEEEEECCC---------------------------C-ceEEeecC-CCccceEECCCCC
Confidence 9999999999998 44566666654211 1 12223323 3478889997664
Q ss_pred -EE-EEECCCeEEEEecc--cCceeEEEECCeeeEEEEECCCCCEEEEee-CCCcEEEEcCCCCCcceEEEEeccccCcE
Q psy2107 289 -II-TSSWDHTLKIWDAE--LGGMKSEIVGNKSFFDVHYSPLSKLVITAS-ADKQIRLYDPKVKEGAIVKSTFSSHKEWV 363 (391)
Q Consensus 289 -l~-s~~~dg~i~iwd~~--~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~-~dg~i~iwd~~~~~~~~~~~~~~~h~~~v 363 (391)
++ +++.++.+++|++. ++...........+.+++|+|++++|+.++ .++.+++|++..... ....+..|...+
T Consensus 142 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~ 219 (297)
T 2ojh_A 142 SFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS--SVERITDSAYGD 219 (297)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS--CEEECCCCSEEE
T ss_pred EEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC--CcEEEecCCccc
Confidence 54 67889999999864 344433333445789999999999887766 588999998763221 345667788889
Q ss_pred EEEEECCCCCCEEEEeeCC-----------CcEEEEecC
Q psy2107 364 QSVRWSPIDPQLFVSASFD-----------NSVKLWDLR 391 (391)
Q Consensus 364 ~~~~~~~~~~~~l~s~~~d-----------g~v~iwdlr 391 (391)
.+++|+| ++.+|++++.+ +.|++||++
T Consensus 220 ~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 220 WFPHPSP-SGDKVVFVSYDADVFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp EEEEECT-TSSEEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred CCeEECC-CCCEEEEEEcCCCCCcccccCceEEEEEecC
Confidence 9999999 55667776655 569999873
No 137
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=1e-21 Score=176.38 Aligned_cols=196 Identities=11% Similarity=0.085 Sum_probs=147.3
Q ss_pred cEEEEEec--CCEEEEEECCCeEEEEcCCC-----------ceEEe-----ccCCCCCeeEEEEEecCCCCeEEE----E
Q psy2107 118 WVSAIDFH--NDWILTGCYDHSVHIWTRRG-----------EHKLN-----IPGHGGPVKGVAWLYNDGKDAAFI----S 175 (391)
Q Consensus 118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~~~-----------~~~~~-----~~~~~~~v~~l~~~~~~~~~~~l~----s 175 (391)
.++.++++ +.++++++.|| +++|+... ..... ...+...|.+++| ++++.+|+ +
T Consensus 38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---spdg~~lav~~~s 113 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLAL---SCDNLTLSACMMS 113 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEE---CTTSCEEEEEEEE
T ss_pred CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEE---cCCCCEEEEEEec
Confidence 45666766 67999999888 88876410 11111 1235678999999 77889998 7
Q ss_pred EeCCCcEEEEeecCCC-------CceeEEEEEecCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCC
Q psy2107 176 VSTDQTAMIWEWKVES-------NSIECIHVCRGHERGLETVTVSES-RQQFATGGWDCLLKIWSADISKERGDPSENGD 247 (391)
Q Consensus 176 ~~~dg~v~iwd~~~~~-------~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~ 247 (391)
|+.|+.|++||+.... .....+..+.+|...|.+++|+|+ +.+|++++.||.|++||++++
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~----------- 182 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET----------- 182 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS-----------
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC-----------
Confidence 8899999999975320 112235666789999999999997 889999999999999999763
Q ss_pred CCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECC--------eee
Q psy2107 248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGN--------KSF 318 (391)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------~~i 318 (391)
.......+|...|.+++|+|++ .|++|+.||.|++||++ ++....+..+ ..+
T Consensus 183 ------------------~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v 243 (434)
T 2oit_A 183 ------------------VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRV 243 (434)
T ss_dssp ------------------EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEE
T ss_pred ------------------cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeE
Confidence 2344455788999999999655 59999999999999998 5655555432 278
Q ss_pred EEEEECCCCCEEEEe-eCCC------cEEEEcCCCC
Q psy2107 319 FDVHYSPLSKLVITA-SADK------QIRLYDPKVK 347 (391)
Q Consensus 319 ~~~~~~p~~~~l~~g-~~dg------~i~iwd~~~~ 347 (391)
.+++|++++.++++. +.+| .+++|+++..
T Consensus 244 ~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 244 LDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 999999988877543 3343 3899999765
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=1.2e-20 Score=174.03 Aligned_cols=258 Identities=12% Similarity=0.084 Sum_probs=183.4
Q ss_pred ccceEEEEEEeccCCCCCCccc-CCCCcEEEEEec--CCEEEEEECCCeEEEEcC--C-CceEEeccCCCCCeeEEEEEe
Q psy2107 92 SENVIDVEYLESTPTPSPLDCI-LHDDWVSAIDFH--NDWILTGCYDHSVHIWTR--R-GEHKLNIPGHGGPVKGVAWLY 165 (391)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~--~-~~~~~~~~~~~~~v~~l~~~~ 165 (391)
.++.+.+|....... ...+. +|. +.+++|+ +++|++++.|++|++||+ . ...+..+. +...+..++|
T Consensus 157 ~d~~V~v~D~~t~~~--~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~-- 229 (543)
T 1nir_A 157 DAGQIALVDGDSKKI--VKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVES-- 229 (543)
T ss_dssp GGTEEEEEETTTCCE--EEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEE--
T ss_pred CCCeEEEEECCCceE--EEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEe--
Confidence 356677775432211 11112 333 8888897 679999999999999999 4 44444555 5566899999
Q ss_pred cCC----CCeEEEEEeC-CCcEEEEeecCCCCceeEEEEEec----------C-CCCeEEEEEcCCCCE-EEEEeCCCcE
Q psy2107 166 NDG----KDAAFISVST-DQTAMIWEWKVESNSIECIHVCRG----------H-ERGLETVTVSESRQQ-FATGGWDCLL 228 (391)
Q Consensus 166 ~~~----~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~----------~-~~~v~~l~~~~~~~~-l~sg~~dg~i 228 (391)
++ +++++++++. +++|.+||.. ..+++..+.. | ...+.++.++|++.. +++...++.|
T Consensus 230 -sp~~~~dg~~l~v~~~~~~~v~v~D~~----t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i 304 (543)
T 1nir_A 230 -SKFKGYEDRYTIAGAYWPPQFAIMDGE----TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKV 304 (543)
T ss_dssp -CCSTTCTTTEEEEEEEESSEEEEEETT----TCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred -CCCcCCCCCEEEEEEccCCeEEEEecc----ccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeE
Confidence 77 8888888874 8999999943 3455555543 2 237889999997654 5667788999
Q ss_pred EEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEE-ECCCeEEEEecccC
Q psy2107 229 KIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITS-SWDHTLKIWDAELG 306 (391)
Q Consensus 229 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~-~~dg~i~iwd~~~~ 306 (391)
.+||+.+.+. ..+..+ .+...+..+.|+|++. ++++ ..+++|.+||+.++
T Consensus 305 ~vvd~~~~~~---------------------------l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg 356 (543)
T 1nir_A 305 LLVNYKDIDN---------------------------LTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR 356 (543)
T ss_dssp EEEECTTSSS---------------------------CEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred EEEEecCCCc---------------------------ceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC
Confidence 9999976332 011233 3556688899997765 5555 45899999999999
Q ss_pred ceeEEEECC----e-eeEEEEECCC-CCEEEEee-CCCcEEEEcCCCCCc----ceEEEEeccccCcEEEEEECCCCCCE
Q psy2107 307 GMKSEIVGN----K-SFFDVHYSPL-SKLVITAS-ADKQIRLYDPKVKEG----AIVKSTFSSHKEWVQSVRWSPIDPQL 375 (391)
Q Consensus 307 ~~~~~~~~~----~-~i~~~~~~p~-~~~l~~g~-~dg~i~iwd~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~~ 375 (391)
+++..+... . ....+ ++|+ +.+++++. .|++|.+||+.+... ..++..+.+|...+..++++| +++.
T Consensus 357 ~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~p-dg~~ 434 (543)
T 1nir_A 357 RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHP-KSSH 434 (543)
T ss_dssp EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCT-TCCE
T ss_pred eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCC-CCCc
Confidence 998888742 1 12222 4676 66677765 689999999987221 347889999998899999999 5667
Q ss_pred EEEee-------CCCcEEEEecC
Q psy2107 376 FVSAS-------FDNSVKLWDLR 391 (391)
Q Consensus 376 l~s~~-------~dg~v~iwdlr 391 (391)
|++++ .+++|.|||+.
T Consensus 435 l~v~~~~~~~~~~~~~v~v~d~~ 457 (543)
T 1nir_A 435 LYVDTTFNPDARISQSVAVFDLK 457 (543)
T ss_dssp EEECCTTCSSHHHHTCEEEEETT
T ss_pred EEEecCCCCCcccCceEEEEECC
Confidence 88776 27899999974
No 139
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.88 E-value=2.1e-20 Score=163.44 Aligned_cols=223 Identities=9% Similarity=0.050 Sum_probs=157.9
Q ss_pred CCEEEEEECCCeEEEEcCCC-ceEEeccCCC-CCeeEEEEEecCCCCeEE-EEEeCCCcEEEEeecCCCCceeEEEEEec
Q psy2107 126 NDWILTGCYDHSVHIWTRRG-EHKLNIPGHG-GPVKGVAWLYNDGKDAAF-ISVSTDQTAMIWEWKVESNSIECIHVCRG 202 (391)
Q Consensus 126 ~~~l~t~~~dg~i~iwd~~~-~~~~~~~~~~-~~v~~l~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 202 (391)
+.++++++.++.|++||..+ +....+..+. ..+..++| +++++++ +++..++.|.+||+. + .+.+..+..
T Consensus 11 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~---s~dg~~~~v~~~~~~~i~~~d~~--t--~~~~~~~~~ 83 (349)
T 1jmx_B 11 HEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMM---APDNRTAYVLNNHYGDIYGIDLD--T--CKNTFHANL 83 (349)
T ss_dssp CEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEE---CTTSSEEEEEETTTTEEEEEETT--T--TEEEEEEES
T ss_pred CEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEE---CCCCCEEEEEeCCCCcEEEEeCC--C--CcEEEEEEc
Confidence 55889999999999999954 4444444332 25788999 6777754 556678999999954 2 234444442
Q ss_pred C------CCCeEEEEEcCCCCEEEEEeCC------------CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107 203 H------ERGLETVTVSESRQQFATGGWD------------CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS 264 (391)
Q Consensus 203 ~------~~~v~~l~~~~~~~~l~sg~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (391)
+ ...+.+++|+|+++++++++.+ +.|.+||+.+++..
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~------------------------- 138 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA------------------------- 138 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB-------------------------
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccc-------------------------
Confidence 2 2237889999999999998865 89999999764321
Q ss_pred CCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe----------------------------
Q psy2107 265 RTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK---------------------------- 316 (391)
Q Consensus 265 ~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---------------------------- 316 (391)
..+..+. +...+.+++|++++.+++++ +.|.+||+.+++....+....
T Consensus 139 -~~~~~~~-~~~~~~~~~~s~dg~l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (349)
T 1jmx_B 139 -KPVRTFP-MPRQVYLMRAADDGSLYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLY 214 (349)
T ss_dssp -CCSEEEE-CCSSCCCEEECTTSCEEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEE
T ss_pred -ceeeecc-CCCcccceeECCCCcEEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeee
Confidence 1222333 23468889999877766654 449999999888776654331
Q ss_pred -----------------------------------------eeEEEEECC-CCCEEEEeeCCCcEEEEcCCCCCcceEEE
Q psy2107 317 -----------------------------------------SFFDVHYSP-LSKLVITASADKQIRLYDPKVKEGAIVKS 354 (391)
Q Consensus 317 -----------------------------------------~i~~~~~~p-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 354 (391)
.+..++|+| ++++++++ ++.|.+||+.+++ ...
T Consensus 215 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~---~~~ 289 (349)
T 1jmx_B 215 TIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRK---LIK 289 (349)
T ss_dssp EEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTE---EEE
T ss_pred eeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCe---EEE
Confidence 234567789 99999888 8899999998755 444
Q ss_pred EeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 355 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 355 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
.+. ....+.+++|+|++.. |++++.++.|++||++
T Consensus 290 ~~~-~~~~~~~~~~s~dg~~-l~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 290 AAN-LDHTYYCVAFDKKGDK-LYLGGTFNDLAVFNPD 324 (349)
T ss_dssp EEE-CSSCCCEEEECSSSSC-EEEESBSSEEEEEETT
T ss_pred EEc-CCCCccceEECCCCCE-EEEecCCCeEEEEecc
Confidence 443 2345789999995554 5557788999999974
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.88 E-value=9.7e-20 Score=159.54 Aligned_cols=234 Identities=9% Similarity=0.078 Sum_probs=169.7
Q ss_pred CCcEEEEEec--CCEEEEEEC-------CCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCe-EEEEEeCCCcEEE
Q psy2107 116 DDWVSAIDFH--NDWILTGCY-------DHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDA-AFISVSTDQTAMI 184 (391)
Q Consensus 116 ~~~V~~~~~~--~~~l~t~~~-------dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~-~l~s~~~dg~v~i 184 (391)
...+..++++ ++.+++++. ++.|.+||.. ++....+. ....+..++| +++++ ++++...++.|.+
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~---s~dg~~l~v~~~~~~~v~~ 115 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH-NDLKPFGATI---NNTTQTLWFGNTVNSAVTA 115 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE-ESSCCCSEEE---ETTTTEEEEEETTTTEEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe-cCCCcceEEE---CCCCCEEEEEecCCCEEEE
Confidence 3456788887 567777764 5689999995 44444444 3455788999 55666 5555566899999
Q ss_pred EeecCCCCceeEEEEEecCCC---------CeEEEEEcCCCCEEEEEe--CCCcEEEEECCCCCCCCCCCCCCCCCcccc
Q psy2107 185 WEWKVESNSIECIHVCRGHER---------GLETVTVSESRQQFATGG--WDCLLKIWSADISKERGDPSENGDEGTTSK 253 (391)
Q Consensus 185 wd~~~~~~~~~~~~~~~~~~~---------~v~~l~~~~~~~~l~sg~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 253 (391)
||.. ..+.+..+..+.. .+.+++|+|+++++++++ .++.|.+||..+++
T Consensus 116 ~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~---------------- 175 (353)
T 3vgz_A 116 IDAK----TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIK---------------- 175 (353)
T ss_dssp EETT----TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTE----------------
T ss_pred EeCC----CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCc----------------
Confidence 9954 2344455554332 278899999999887776 47889999997633
Q ss_pred ccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEEC-----CeeeEEEEECCCC
Q psy2107 254 KRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVG-----NKSFFDVHYSPLS 327 (391)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~i~~~~~~p~~ 327 (391)
....+..+...+..++|++++ .+++++.++.|.+||+.+++....+.. ...+..++|+|++
T Consensus 176 -------------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg 242 (353)
T 3vgz_A 176 -------------LKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTAR 242 (353)
T ss_dssp -------------EEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTT
T ss_pred -------------eEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCC
Confidence 344454455567889999654 588888999999999999998888765 2257789999999
Q ss_pred CEEEEeeC-CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 328 KLVITASA-DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 328 ~~l~~g~~-dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+++++++. ++.|.+||+.+++ ....+.... ...++|+|++..++++...++.|.+||++
T Consensus 243 ~~l~~~~~~~~~v~~~d~~~~~---~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 302 (353)
T 3vgz_A 243 QRAFITDSKAAEVLVVDTRNGN---ILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAK 302 (353)
T ss_dssp TEEEEEESSSSEEEEEETTTCC---EEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CEEEEEeCCCCEEEEEECCCCc---EEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECC
Confidence 97776654 5999999998766 444444332 25799999665566777689999999973
No 141
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.88 E-value=4.5e-20 Score=161.43 Aligned_cols=243 Identities=7% Similarity=0.079 Sum_probs=163.4
Q ss_pred CCCcEEEEEec--CCEEEEEEC---CCeEEEEcCCCce---EEeccCCCCCeeEEEEEecCCCCeEEEEEe-CCCcEEEE
Q psy2107 115 HDDWVSAIDFH--NDWILTGCY---DHSVHIWTRRGEH---KLNIPGHGGPVKGVAWLYNDGKDAAFISVS-TDQTAMIW 185 (391)
Q Consensus 115 h~~~V~~~~~~--~~~l~t~~~---dg~i~iwd~~~~~---~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~-~dg~v~iw 185 (391)
+...+..++|+ ++ |++++. ++.|++|++.+.. +..+..+...+..++| ++++++|++++ .++.|.+|
T Consensus 38 ~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~---spdg~~l~~~~~~~~~v~v~ 113 (347)
T 3hfq_A 38 ATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV---DEARQLVYSANYHKGTAEVM 113 (347)
T ss_dssp ECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE---ETTTTEEEEEETTTTEEEEE
T ss_pred ccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE---CCCCCEEEEEeCCCCEEEEE
Confidence 44556678887 44 555544 6899999995433 3344456778899999 66788787777 78999999
Q ss_pred eecCCCCceeEEEEEecC---------CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC-CCCCCCCCCCCCCCcccccc
Q psy2107 186 EWKVESNSIECIHVCRGH---------ERGLETVTVSESRQQFATGGWDCLLKIWSADI-SKERGDPSENGDEGTTSKKR 255 (391)
Q Consensus 186 d~~~~~~~~~~~~~~~~~---------~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~ 255 (391)
++.. ......+..+... ...+.+++|+|+++++++...++.|.+|++.. ++.
T Consensus 114 ~~~~-~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~----------------- 175 (347)
T 3hfq_A 114 KIAA-DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQL----------------- 175 (347)
T ss_dssp EECT-TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCE-----------------
T ss_pred EeCC-CCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcE-----------------
Confidence 9753 2333444444321 23488999999999666666788999999973 211
Q ss_pred ccccccCCCCCceeeecC-ccCcccEEEeccCCe-EEE-EECCCeEEEEeccc--Cce--eEEEECC-------eeeEEE
Q psy2107 256 KKEYSSASSRTPLITLKG-HKEAISAVQWTAVDE-IIT-SSWDHTLKIWDAEL--GGM--KSEIVGN-------KSFFDV 321 (391)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~-l~s-~~~dg~i~iwd~~~--~~~--~~~~~~~-------~~i~~~ 321 (391)
.....+.. ....+..++|+|++. +++ +..++.|.+|++.. ++. ...+... ..+..+
T Consensus 176 ----------~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i 245 (347)
T 3hfq_A 176 ----------SEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAI 245 (347)
T ss_dssp ----------EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEE
T ss_pred ----------EEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeE
Confidence 11111121 223567899997775 555 45688999999874 443 2222221 357889
Q ss_pred EECCCCCEE-EEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEee-CCCcEEEEec
Q psy2107 322 HYSPLSKLV-ITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDL 390 (391)
Q Consensus 322 ~~~p~~~~l-~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwdl 390 (391)
+|+|+|++| +++..++.|.+|++........+..+..+...+.+++|+|++ ++|++++ .++.|.+|++
T Consensus 246 ~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg-~~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 246 RLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTE-AFVVVVNQNTDNATLYAR 315 (347)
T ss_dssp EECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTS-SEEEEEETTTTEEEEEEE
T ss_pred EECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCC-CEEEEEEcCCCcEEEEEE
Confidence 999999977 455668999999986332223555666666778999999954 5555555 5589999954
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=1.2e-20 Score=181.79 Aligned_cols=242 Identities=8% Similarity=0.014 Sum_probs=169.4
Q ss_pred CCcEEEEEec--CCEEEEEEC-CC-----eEEEEcCCCc-eEEeccCCC------------------------CCeeEEE
Q psy2107 116 DDWVSAIDFH--NDWILTGCY-DH-----SVHIWTRRGE-HKLNIPGHG------------------------GPVKGVA 162 (391)
Q Consensus 116 ~~~V~~~~~~--~~~l~t~~~-dg-----~i~iwd~~~~-~~~~~~~~~------------------------~~v~~l~ 162 (391)
...|.+++|+ |++|++++. || .|++||+.+. ....+..+. ..+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 4568899998 679999998 88 9999999544 333333322 2378999
Q ss_pred EEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCC
Q psy2107 163 WLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDP 242 (391)
Q Consensus 163 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 242 (391)
| ++++++|++++. +.|++||+..... .....+..|...+.+++|+|+|++|+.++. +.|++||+.+++.....
T Consensus 116 ~---SpDg~~l~~~~~-~~i~~~d~~~~~~--~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 116 W---SPDAQRLLFPLG-GELYLYDLKQEGK--AAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLT 188 (741)
T ss_dssp E---CTTSSEEEEEET-TEEEEEESSSCST--TSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECC
T ss_pred E---CCCCCEEEEEeC-CcEEEEECCCCCc--ceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEec
Confidence 9 889999999886 9999999653200 012345567788999999999999998874 68999999764431100
Q ss_pred CCCCCCCccccccccccccCCCCCceeeecC--------ccCcccEEEeccCCe-EEEEECCC-----------------
Q psy2107 243 SENGDEGTTSKKRKKEYSSASSRTPLITLKG--------HKEAISAVQWTAVDE-IITSSWDH----------------- 296 (391)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~-l~s~~~dg----------------- 296 (391)
... ... ...+ ....+..++|+|++. |++++.|+
T Consensus 189 ~~~-------------------~~~--~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~ 247 (741)
T 2ecf_A 189 ADG-------------------STT--IGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTD 247 (741)
T ss_dssp CCC-------------------CSS--EEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEE
T ss_pred cCC-------------------ccc--eeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCccc
Confidence 000 000 0000 012257899997765 77777665
Q ss_pred ----------------eEEEEeccc-CceeEEEE---CCeeeEEEEECCCCCEEEEeeC-----CCcEEEEcCCCCCcce
Q psy2107 297 ----------------TLKIWDAEL-GGMKSEIV---GNKSFFDVHYSPLSKLVITASA-----DKQIRLYDPKVKEGAI 351 (391)
Q Consensus 297 ----------------~i~iwd~~~-~~~~~~~~---~~~~i~~~~~~p~~~~l~~g~~-----dg~i~iwd~~~~~~~~ 351 (391)
.|.+||+.+ ++...... ....+..++| |+|++|++++. +..|++||+.+++
T Consensus 248 ~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~--- 323 (741)
T 2ecf_A 248 VIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ--- 323 (741)
T ss_dssp EEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC---
T ss_pred ceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc---
Confidence 889999988 77654432 3457899999 99999987653 5689999998766
Q ss_pred EEEEeccccC----cEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 352 VKSTFSSHKE----WVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 352 ~~~~~~~h~~----~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
....+..+.. .+.+++|+|+ ++++++++.||.++||.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~spd-g~~~~~~~~~g~~~l~~~ 365 (741)
T 2ecf_A 324 QRVLAHETSPTWVPLHNSLRFLDD-GSILWSSERTGFQHLYRI 365 (741)
T ss_dssp EEEEEEEECSSCCCCCSCCEECTT-SCEEEEECTTSSCEEEEE
T ss_pred eEEEEEcCCCCcCCcCCceEECCC-CeEEEEecCCCccEEEEE
Confidence 3334444432 4568999995 458999999998888864
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.87 E-value=1.2e-19 Score=157.77 Aligned_cols=218 Identities=11% Similarity=0.092 Sum_probs=145.5
Q ss_pred CEEEEEECCCeEEEEcCCC-ceEEeccCCCC---CeeEEEEEecCCCCeE-EEEEeCCCcEEEEeecCCCCceeEEEEEe
Q psy2107 127 DWILTGCYDHSVHIWTRRG-EHKLNIPGHGG---PVKGVAWLYNDGKDAA-FISVSTDQTAMIWEWKVESNSIECIHVCR 201 (391)
Q Consensus 127 ~~l~t~~~dg~i~iwd~~~-~~~~~~~~~~~---~v~~l~~~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 201 (391)
+++++++.++.|++||... +.+..+. ... .+..++| +++++. ++++..++.|.+||+. + .+.+..+.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~---s~dg~~l~v~~~~~~~v~~~d~~--~--~~~~~~~~ 73 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVIT-IADAGPTPMVPMV---APGGRIAYATVNKSESLVKIDLV--T--GETLGRID 73 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEE-CTTCTTCCCCEEE---CTTSSEEEEEETTTTEEEEEETT--T--CCEEEEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEE-cCCCCCCccceEE---cCCCCEEEEEeCCCCeEEEEECC--C--CCeEeeEE
Confidence 4789999999999999954 4444443 223 5788999 777765 4566678999999954 2 23344343
Q ss_pred c-C----CCCeEEEEEcCCCCEEEEEe------------CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107 202 G-H----ERGLETVTVSESRQQFATGG------------WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS 264 (391)
Q Consensus 202 ~-~----~~~v~~l~~~~~~~~l~sg~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (391)
. + ...+.+++|+|+++++++++ .++.|.+||+.+++.
T Consensus 74 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~-------------------------- 127 (337)
T 1pby_B 74 LSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR-------------------------- 127 (337)
T ss_dssp CCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE--------------------------
T ss_pred cCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcE--------------------------
Confidence 2 1 22577899999999998886 579999999976443
Q ss_pred CCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEEC-----------------------------
Q psy2107 265 RTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVG----------------------------- 314 (391)
Q Consensus 265 ~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~----------------------------- 314 (391)
...+.. ...+.+++|+|++. ++++ ++.|.+||+.+++....+..
T Consensus 128 ---~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 201 (337)
T 1pby_B 128 ---RKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATP 201 (337)
T ss_dssp ---EEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEE
T ss_pred ---EEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeee
Confidence 122221 22344555554433 3333 45555555554443322211
Q ss_pred --------------------------------------CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEe
Q psy2107 315 --------------------------------------NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTF 356 (391)
Q Consensus 315 --------------------------------------~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~ 356 (391)
...+.+++|+|++++++++ ++.|++||+.+++ ....+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~---~~~~~ 276 (337)
T 1pby_B 202 FYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNA---SIKRV 276 (337)
T ss_dssp EEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTE---EEEEE
T ss_pred eeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCc---Cccee
Confidence 1235579999999999888 7999999987754 44444
Q ss_pred ccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 357 SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 357 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
.. ...+.+++|+| ++.+|++++.++.|++||++
T Consensus 277 ~~-~~~~~~~~~s~-dg~~l~~~~~~~~i~v~d~~ 309 (337)
T 1pby_B 277 PL-PHSYYSVNVST-DGSTVWLGGALGDLAAYDAE 309 (337)
T ss_dssp EC-SSCCCEEEECT-TSCEEEEESBSSEEEEEETT
T ss_pred cC-CCceeeEEECC-CCCEEEEEcCCCcEEEEECc
Confidence 43 34578999999 45567777889999999974
No 144
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.86 E-value=1.1e-19 Score=157.86 Aligned_cols=227 Identities=11% Similarity=0.044 Sum_probs=158.7
Q ss_pred CEEEEEECCCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC-CCcEEEEeecCCCCceeEEEEEecCC
Q psy2107 127 DWILTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST-DQTAMIWEWKVESNSIECIHVCRGHE 204 (391)
Q Consensus 127 ~~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~ 204 (391)
..+++++.++.|.+||.. ++....+..+...+ .++| +++++++++++. ++.|.+||+. .... ....+..+.
T Consensus 11 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~---s~dg~~l~~~~~~~~~i~~~d~~--~~~~-~~~~~~~~~ 83 (331)
T 3u4y_A 11 FGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAI---TSDCSNVVVTSDFCQTLVQIETQ--LEPP-KVVAIQEGQ 83 (331)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEE---CSSSCEEEEEESTTCEEEEEECS--SSSC-EEEEEEECS
T ss_pred EEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEE---cCCCCEEEEEeCCCCeEEEEECC--CCce-eEEecccCC
Confidence 367888899999999994 55555555555666 9999 778876665555 8999999965 2222 144555566
Q ss_pred CCeEEEEEcCCCCEEEEEeCCC---cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEE
Q psy2107 205 RGLETVTVSESRQQFATGGWDC---LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAV 281 (391)
Q Consensus 205 ~~v~~l~~~~~~~~l~sg~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 281 (391)
.+..+++|+|++++++++..++ .|.+||+.+++ .+..+.. .....++
T Consensus 84 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~-----------------------------~~~~~~~-~~~~~~~ 133 (331)
T 3u4y_A 84 SSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNK-----------------------------FISTIPI-PYDAVGI 133 (331)
T ss_dssp SCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTE-----------------------------EEEEEEC-CTTEEEE
T ss_pred CCccceEECCCCCEEEEecCCCCcccEEEEECCCCC-----------------------------eEEEEEC-CCCccce
Confidence 6666699999999999655553 89999997633 3333433 3345899
Q ss_pred EeccCCe-EEEE-ECCCe-EEEEecccCcee-----EEEECCeeeEEEEECCCCCEEEE-eeCCCcEEEEcCCCCCcceE
Q psy2107 282 QWTAVDE-IITS-SWDHT-LKIWDAELGGMK-----SEIVGNKSFFDVHYSPLSKLVIT-ASADKQIRLYDPKVKEGAIV 352 (391)
Q Consensus 282 ~~~~~~~-l~s~-~~dg~-i~iwd~~~~~~~-----~~~~~~~~i~~~~~~p~~~~l~~-g~~dg~i~iwd~~~~~~~~~ 352 (391)
+|+|++. ++++ ..++. |.+|++.....+ ..+........++|+|+|+++++ +..++.|++||+.+++....
T Consensus 134 ~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~ 213 (331)
T 3u4y_A 134 AISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITL 213 (331)
T ss_dssp EECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEE
T ss_pred EECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccce
Confidence 9997764 5554 55588 999998754432 22233446789999999996654 45689999999987663122
Q ss_pred EEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 353 KSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 353 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
+..+.. ...+..++|+|++..++++...++.|.+||+.
T Consensus 214 ~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~ 251 (331)
T 3u4y_A 214 LNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQL 251 (331)
T ss_dssp EEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETT
T ss_pred eeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECC
Confidence 445543 36678999999555455666678899999973
No 145
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.86 E-value=1.3e-20 Score=176.40 Aligned_cols=228 Identities=13% Similarity=0.106 Sum_probs=166.0
Q ss_pred CcEEEEEec--CCEEEEEEC-CCeEEEEcCCCceEEeccCCC-CCeeEEEEEecCCCCeEEEEEeC---CCcEEEEeecC
Q psy2107 117 DWVSAIDFH--NDWILTGCY-DHSVHIWTRRGEHKLNIPGHG-GPVKGVAWLYNDGKDAAFISVST---DQTAMIWEWKV 189 (391)
Q Consensus 117 ~~V~~~~~~--~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~-~~v~~l~~~~~~~~~~~l~s~~~---dg~v~iwd~~~ 189 (391)
.+|.+++|+ |+.||.++. ||+++||++++.....+..|. ..+..++| +|+ .++++++. +....+|.++.
T Consensus 22 ~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~---spd-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHY---GVG-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECT---TCS-EEEEEEECSTTSCCEEEEEEET
T ss_pred cchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccC---CCC-eEEEEeccCCCCcceEEEEEec
Confidence 368888887 789998877 999999999777777777666 68999999 667 77777765 56678887665
Q ss_pred --CCCceeEEEEEecCCCCeEEEEEcCCCCE-EEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107 190 --ESNSIECIHVCRGHERGLETVTVSESRQQ-FATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT 266 (391)
Q Consensus 190 --~~~~~~~~~~~~~~~~~v~~l~~~~~~~~-l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (391)
.... . .+.. ...+...+|+|+++. +++.+.++.+.+||+.+++.
T Consensus 98 ~~~g~~-~---~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~---------------------------- 144 (582)
T 3o4h_A 98 SRPGEE-Q---RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL---------------------------- 144 (582)
T ss_dssp TSTTCC-E---ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE----------------------------
T ss_pred cCCCcc-c---cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE----------------------------
Confidence 3222 1 2222 223446688887753 33334445566999976332
Q ss_pred ceeeecCccCcccEEEeccCCe-EEEEECC----CeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCC--cE
Q psy2107 267 PLITLKGHKEAISAVQWTAVDE-IITSSWD----HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADK--QI 339 (391)
Q Consensus 267 ~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg--~i 339 (391)
. .+..+.. .+++|+|++. +++++.+ +.|++||+.+++......+...+..++|+|||++|+++..++ .|
T Consensus 145 -~-~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i 220 (582)
T 3o4h_A 145 -R-ELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARL 220 (582)
T ss_dssp -E-EEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEE
T ss_pred -E-EeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEE
Confidence 1 2222222 7899997665 6667766 789999999888764433445789999999999999888888 89
Q ss_pred EEEcCCCCCcceEEEEeccccCcEEEEE--------ECCCCCCEEEEeeCCCcEEEEec
Q psy2107 340 RLYDPKVKEGAIVKSTFSSHKEWVQSVR--------WSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 340 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~--------~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
++||+.+++ .. .+.+|...+..++ |+|++ .++++++.||.+++|++
T Consensus 221 ~~~d~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 221 VTVDPRDGS---VE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID 274 (582)
T ss_dssp EEECTTTCC---EE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET
T ss_pred EEEcCCCCc---EE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE
Confidence 999998765 44 6677877777777 99966 89999999999999985
No 146
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=3e-20 Score=178.07 Aligned_cols=239 Identities=10% Similarity=0.056 Sum_probs=167.3
Q ss_pred CcEEEEEecCC-EEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC-CCce
Q psy2107 117 DWVSAIDFHND-WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE-SNSI 194 (391)
Q Consensus 117 ~~V~~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~ 194 (391)
..|.+++|+++ .++.+ .++.|++||+.+.....+..+...+.+++| +|+++.|+++ .|+.|++|++... ....
T Consensus 82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~---SpdG~~la~~-~~~~i~v~~~~~~~~~~g 156 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDF---SPVGDRVAYV-RNHNLYIARGGKLGEGMS 156 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEE---CTTSSEEEEE-ETTEEEEEECBCTTSCCC
T ss_pred cCceeEEECCCCeEEEE-ECCEEEEEECCCCceEEccCCcccccCCcC---CCCCCEEEEE-ECCeEEEEecCcccccCC
Confidence 56999999954 44444 569999999977777777777888999999 7889988885 6899999996530 0001
Q ss_pred eEEEEEecCCCC--------------eEEEEEcCCCCEEEEEe---------------------------------CCCc
Q psy2107 195 ECIHVCRGHERG--------------LETVTVSESRQQFATGG---------------------------------WDCL 227 (391)
Q Consensus 195 ~~~~~~~~~~~~--------------v~~l~~~~~~~~l~sg~---------------------------------~dg~ 227 (391)
........+... +.+++|+|+|++|++++ .+..
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 157 RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 222222222222 48999999999999987 3467
Q ss_pred EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECCC-----eEEEE
Q psy2107 228 LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDH-----TLKIW 301 (391)
Q Consensus 228 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg-----~i~iw 301 (391)
|.+||+.+++.. .+.....|...+.+++|+|++. +++++.++ .|++|
T Consensus 237 l~~~d~~~~~~~---------------------------~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~ 289 (706)
T 2z3z_A 237 VGIYHLATGKTV---------------------------YLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAY 289 (706)
T ss_dssp EEEEETTTTEEE---------------------------ECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEE
T ss_pred EEEEECCCCceE---------------------------eeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEE
Confidence 888888663321 1111124667789999997765 77777665 89999
Q ss_pred ecccCceeEEEE---CCe---eeEEEEECC--CCCEEEEeeCCCcEEEEcCC-CCCcceEEEEeccccCcEEE-EEECCC
Q psy2107 302 DAELGGMKSEIV---GNK---SFFDVHYSP--LSKLVITASADKQIRLYDPK-VKEGAIVKSTFSSHKEWVQS-VRWSPI 371 (391)
Q Consensus 302 d~~~~~~~~~~~---~~~---~i~~~~~~p--~~~~l~~g~~dg~i~iwd~~-~~~~~~~~~~~~~h~~~v~~-~~~~~~ 371 (391)
|+.+++....+. ... .+..++|+| +|+++++++.++.++||.+. .+. ....+..|...+.. ++|+|+
T Consensus 290 d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~---~~~~l~~~~~~v~~~~~~spd 366 (706)
T 2z3z_A 290 DAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGR---LIRQVTKGEWEVTNFAGFDPK 366 (706)
T ss_dssp ETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSC---EEEECCCSSSCEEEEEEECTT
T ss_pred ECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCC---EEEecCCCCeEEEeeeEEcCC
Confidence 999984333332 111 235789999 99999999999999999875 222 45567778778877 799996
Q ss_pred CCCEEEEeeCCC----cEEEEec
Q psy2107 372 DPQLFVSASFDN----SVKLWDL 390 (391)
Q Consensus 372 ~~~~l~s~~~dg----~v~iwdl 390 (391)
+..++++++.++ .|..||+
T Consensus 367 g~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 367 GTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp SSEEEEEESSSCTTCBEEEEEET
T ss_pred CCEEEEEecCCCCceEEEEEEEc
Confidence 655556666665 5555654
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=3.6e-20 Score=178.07 Aligned_cols=301 Identities=10% Similarity=0.065 Sum_probs=177.2
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCC---cEEEEEec--CCEEEEEECC-----
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDD---WVSAIDFH--NDWILTGCYD----- 135 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~V~~~~~~--~~~l~t~~~d----- 135 (391)
....|+++|+++.+ +.++.+.+|........ ....+|.. .|.+++|+ |++|++++.+
T Consensus 20 ~~~~~spdg~~~~~-----------~~dg~i~~~d~~~g~~~--~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~ 86 (723)
T 1xfd_A 20 PEAKWISDTEFIYR-----------EQKGTVRLWNVETNTST--VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQ 86 (723)
T ss_dssp CCCCBSSSSCBCCC-----------CSSSCEEEBCGGGCCCE--EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSS
T ss_pred cccEEcCCCcEEEE-----------eCCCCEEEEECCCCcEE--EEeccccccccccceEEECCCCCEEEEEecCcccee
Confidence 45688999987653 24556777765433221 12223433 48899998 6689988774
Q ss_pred ----CeEEEEcCCCceEEecc---CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCC--
Q psy2107 136 ----HSVHIWTRRGEHKLNIP---GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERG-- 206 (391)
Q Consensus 136 ----g~i~iwd~~~~~~~~~~---~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-- 206 (391)
+.+++||+.+.....+. .|...+..++| +|+++.|+.++. +.|++||+. +.. .......+...
T Consensus 87 ~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~---SPdG~~la~~~~-~~i~~~~~~--~g~--~~~~~~~~~~~~~ 158 (723)
T 1xfd_A 87 HSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGW---GPKGQQLIFIFE-NNIYYCAHV--GKQ--AIRVVSTGKEGVI 158 (723)
T ss_dssp SCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCB---CSSTTCEEEEET-TEEEEESSS--SSC--CEEEECCCBTTTE
T ss_pred ecceeeEEEEECCCCceEeccCCccccccccccEE---CCCCCEEEEEEC-CeEEEEECC--CCc--eEEEecCCCCCce
Confidence 78899999655444443 44555889999 778999998886 799999954 222 22333333332
Q ss_pred ----------------eEEEEEcCCCCEEEEEeCC-CcEEEEECCCCCCCCCC-------CCCCCCCccccccccccccC
Q psy2107 207 ----------------LETVTVSESRQQFATGGWD-CLLKIWSADISKERGDP-------SENGDEGTTSKKRKKEYSSA 262 (391)
Q Consensus 207 ----------------v~~l~~~~~~~~l~sg~~d-g~i~iwd~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 262 (391)
+.+++|+|+|+.|++++.| +.+.+|++......... ...+. .........++.
T Consensus 159 ~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~---~~~~~~l~~~d~ 235 (723)
T 1xfd_A 159 YNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGS---ENPSISLHVIGL 235 (723)
T ss_dssp EEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTS---CCCEEEEEEEES
T ss_pred ECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCC---CCCeeEEEEEEC
Confidence 3789999999999988755 34555554321110000 00000 000001111122
Q ss_pred CCCCceeeecC------ccCcccEEEeccCCeEE-EEEC----CCeEEEEecccCceeEEEECC--eee----EEEEECC
Q psy2107 263 SSRTPLITLKG------HKEAISAVQWTAVDEII-TSSW----DHTLKIWDAELGGMKSEIVGN--KSF----FDVHYSP 325 (391)
Q Consensus 263 ~~~~~~~~~~~------~~~~v~~~~~~~~~~l~-s~~~----dg~i~iwd~~~~~~~~~~~~~--~~i----~~~~~~p 325 (391)
........+.. +...+..++|+|++.++ +.+. +..|++||+.+++....+..+ ..+ ..++|+|
T Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp 315 (723)
T 1xfd_A 236 NGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSK 315 (723)
T ss_dssp SSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECT
T ss_pred CCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcC
Confidence 22222233333 35678899999888744 4432 368999999998876655432 222 3789999
Q ss_pred CCCEEEE--eeCCC------cEEEEcCCCCCcceEEEEeccccCcEEE-EEECCCCCCEEEEeeCC--CcEEEEec
Q psy2107 326 LSKLVIT--ASADK------QIRLYDPKVKEGAIVKSTFSSHKEWVQS-VRWSPIDPQLFVSASFD--NSVKLWDL 390 (391)
Q Consensus 326 ~~~~l~~--g~~dg------~i~iwd~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~l~s~~~d--g~v~iwdl 390 (391)
+|+.|+. +..++ .|++||+...........+..+...+.. ++|+|++..+++++..+ +.++||++
T Consensus 316 dg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 391 (723)
T 1xfd_A 316 DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSA 391 (723)
T ss_dssp TSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEE
T ss_pred CCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEE
Confidence 9997765 44566 5777773222210002233333344554 69999554433444444 88999986
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.85 E-value=2.6e-19 Score=171.54 Aligned_cols=273 Identities=11% Similarity=0.097 Sum_probs=179.1
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR 143 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~ 143 (391)
..+.|++++.++.+ .++.+.+|.... .....+..+...+.+++|+ |+.|+++ .|+.|++|++
T Consensus 85 ~~~~~spd~~~~~~------------~~~~i~~~d~~~---~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~ 148 (706)
T 2z3z_A 85 FRTLDAGRGLVVLF------------TQGGLVGFDMLA---RKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARG 148 (706)
T ss_dssp EEEEETTTTEEEEE------------ETTEEEEEETTT---TEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEEC
T ss_pred eeEEECCCCeEEEE------------ECCEEEEEECCC---CceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEec
Confidence 45688888655554 235667766432 1223344566678888888 6688874 6899999999
Q ss_pred CC-----ceEEe-ccCCCCC--------------eeEEEEEecCCCCeEEEEEe--------------------------
Q psy2107 144 RG-----EHKLN-IPGHGGP--------------VKGVAWLYNDGKDAAFISVS-------------------------- 177 (391)
Q Consensus 144 ~~-----~~~~~-~~~~~~~--------------v~~l~~~~~~~~~~~l~s~~-------------------------- 177 (391)
.+ ..... ...+... +.++.| +|++++|++++
T Consensus 149 ~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~---SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y 225 (706)
T 2z3z_A 149 GKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFW---SPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYY 225 (706)
T ss_dssp BCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEE---CTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECC
T ss_pred CcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEE---CCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeC
Confidence 54 44333 3333332 589999 88899999887
Q ss_pred -------CCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCCCCCCCCCC
Q psy2107 178 -------TDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC-----LLKIWSADISKERGDPSEN 245 (391)
Q Consensus 178 -------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg-----~i~iwd~~~~~~~~~~~~~ 245 (391)
.+..|.+||+. +.....+.....|...+.+++|+|+++.|++++.++ .|++||+.+++..
T Consensus 226 ~~~g~~~~~~~l~~~d~~--~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~------ 297 (706)
T 2z3z_A 226 PMAGTPSHHVTVGIYHLA--TGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFV------ 297 (706)
T ss_dssp CBTTSCCCEEEEEEEETT--TTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEE------
T ss_pred CCCCCCCCeeEEEEEECC--CCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCcee------
Confidence 44678889854 332222221124667899999999999999988776 8999999774210
Q ss_pred CCCCccccccccccccCCCCCceeeecCcc---CcccEEEecc--CCe-EEEEECCCeEEEEecc-cCceeEEEECCe-e
Q psy2107 246 GDEGTTSKKRKKEYSSASSRTPLITLKGHK---EAISAVQWTA--VDE-IITSSWDHTLKIWDAE-LGGMKSEIVGNK-S 317 (391)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~--~~~-l~s~~~dg~i~iwd~~-~~~~~~~~~~~~-~ 317 (391)
..+.. ..+. ..+..+.|+| ++. +++++.|+.+++|++. ++..+..+..+. .
T Consensus 298 --------------------~~~~~-~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~ 356 (706)
T 2z3z_A 298 --------------------RTLFV-ETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWE 356 (706)
T ss_dssp --------------------EEEEE-EECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSC
T ss_pred --------------------eEEEE-ccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeE
Confidence 01111 1112 2346789998 776 6667788999999886 566666665444 5
Q ss_pred eEE-EEECCCCCEEEEeeC-CC----cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCC---CcEEEE
Q psy2107 318 FFD-VHYSPLSKLVITASA-DK----QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD---NSVKLW 388 (391)
Q Consensus 318 i~~-~~~~p~~~~l~~g~~-dg----~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d---g~v~iw 388 (391)
+.. ++|+|+++.|+.++. ++ .|+.||+.++. ...+. |...+.+++|+|++..++++++.+ +.|++|
T Consensus 357 v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~----~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~ 431 (706)
T 2z3z_A 357 VTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK----TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVT 431 (706)
T ss_dssp EEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC----CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEE
T ss_pred EEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC----ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEE
Confidence 665 799999997765544 44 56677766543 22332 667799999999555444444443 569999
Q ss_pred ecC
Q psy2107 389 DLR 391 (391)
Q Consensus 389 dlr 391 (391)
|+.
T Consensus 432 d~~ 434 (706)
T 2z3z_A 432 NIG 434 (706)
T ss_dssp ESS
T ss_pred ECC
Confidence 863
No 149
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.84 E-value=4.5e-20 Score=177.35 Aligned_cols=232 Identities=10% Similarity=0.051 Sum_probs=161.3
Q ss_pred EEEEEec--CCEEEEEECCCeEEEEcCC-CceEEeccCCCC---CeeEEEEEecCCCCeEEEEEeCC---------CcEE
Q psy2107 119 VSAIDFH--NDWILTGCYDHSVHIWTRR-GEHKLNIPGHGG---PVKGVAWLYNDGKDAAFISVSTD---------QTAM 183 (391)
Q Consensus 119 V~~~~~~--~~~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~---~v~~l~~~~~~~~~~~l~s~~~d---------g~v~ 183 (391)
+.+++|+ |+++++ +.||+|++||+. ++....+..|.. .|.+++| +|++++|++++.+ +.+.
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~---SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEI---SPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEE---CTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEE---CCCCCEEEEEecCccceeecceeeEE
Confidence 4567887 556655 789999999994 444555555554 4999999 8899999999875 7788
Q ss_pred EEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107 184 IWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS 263 (391)
Q Consensus 184 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (391)
+||+. +.....+....+|...+..++|+|+|+.|+.++. +.|++||+.+++.
T Consensus 95 ~~d~~--~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~------------------------- 146 (723)
T 1xfd_A 95 LSKIP--HGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQA------------------------- 146 (723)
T ss_dssp EEESS--SCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCC-------------------------
T ss_pred EEECC--CCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCce-------------------------
Confidence 99965 3332223222344555889999999999999886 7999999976442
Q ss_pred CCCceeeecCccC------------------cccEEEeccCCe-EEEEECCC----------------------------
Q psy2107 264 SRTPLITLKGHKE------------------AISAVQWTAVDE-IITSSWDH---------------------------- 296 (391)
Q Consensus 264 ~~~~~~~~~~~~~------------------~v~~~~~~~~~~-l~s~~~dg---------------------------- 296 (391)
......+.. .+.+++|+|++. |++++.|+
T Consensus 147 ----~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 222 (723)
T 1xfd_A 147 ----IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAG 222 (723)
T ss_dssp ----EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTT
T ss_pred ----EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCC
Confidence 111122121 237899997765 77766543
Q ss_pred ------eEEEEecccCceeEEEEC-------CeeeEEEEECCCCCEEEEeeC----CCcEEEEcCCCCCcceEEEEec-c
Q psy2107 297 ------TLKIWDAELGGMKSEIVG-------NKSFFDVHYSPLSKLVITASA----DKQIRLYDPKVKEGAIVKSTFS-S 358 (391)
Q Consensus 297 ------~i~iwd~~~~~~~~~~~~-------~~~i~~~~~~p~~~~l~~g~~----dg~i~iwd~~~~~~~~~~~~~~-~ 358 (391)
.|++||+.+++....+.. ...+..++|+|||+++++.+. +..|++||+.+++ +...+. .
T Consensus 223 ~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~---~~~~~~~~ 299 (723)
T 1xfd_A 223 SENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV---CTKKHEDE 299 (723)
T ss_dssp SCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC---EEEEEEEE
T ss_pred CCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc---ceEEEEec
Confidence 799999998886555554 347889999999998877643 3579999998765 333332 2
Q ss_pred ccCcEE----EEEECCCCCCEEEE-eeCCC------cEEEEe
Q psy2107 359 HKEWVQ----SVRWSPIDPQLFVS-ASFDN------SVKLWD 389 (391)
Q Consensus 359 h~~~v~----~~~~~~~~~~~l~s-~~~dg------~v~iwd 389 (391)
+...+. .++|+|++..+++. +..++ .|.+||
T Consensus 300 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 300 SEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp CSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred cCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 344443 78999966665554 56777 566676
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.84 E-value=1.3e-19 Score=180.66 Aligned_cols=235 Identities=9% Similarity=-0.006 Sum_probs=177.7
Q ss_pred cccCCCCcEEEEEecCC-EEEEEECCCeEEEEcC--CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEee
Q psy2107 111 DCILHDDWVSAIDFHND-WILTGCYDHSVHIWTR--RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW 187 (391)
Q Consensus 111 ~~~~h~~~V~~~~~~~~-~l~t~~~dg~i~iwd~--~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~ 187 (391)
.+.+|...+.++.|+++ ++++++.||.+.||.+ .+.....+..|. .+...+|+ +++..++.+ .++.|.+|++
T Consensus 198 ~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~S---pDG~~la~~-~~~~i~~~d~ 272 (1045)
T 1k32_A 198 KIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLN---TDGRRILFS-KGGSIYIFNP 272 (1045)
T ss_dssp EEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEE---ESSSCEEEE-ETTEEEEECT
T ss_pred ECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEc---CCCCEEEEE-eCCEEEEecC
Confidence 34679999999999977 4556777898999975 455566666665 46677894 467778777 4899999995
Q ss_pred cCCCCceeEEEEEec-----------CCCCeEEEEEc-CCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccc
Q psy2107 188 KVESNSIECIHVCRG-----------HERGLETVTVS-ESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKR 255 (391)
Q Consensus 188 ~~~~~~~~~~~~~~~-----------~~~~v~~l~~~-~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 255 (391)
. .. .+..+.+ |...+.+++|+ |+|+.|++++ ++.|.+|++..+.
T Consensus 273 ~--~~---~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~------------------ 328 (1045)
T 1k32_A 273 D--TE---KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY------------------ 328 (1045)
T ss_dssp T--TC---CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB------------------
T ss_pred C--ce---EeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc------------------
Confidence 2 22 1223333 34478999999 9999999888 7899999986522
Q ss_pred ccccccCCCCCceeeecCccC-cccEEEeccCCe-EEEEECCCeEE-EEecccCceeEEEECCeeeEEEEECCCCCEEEE
Q psy2107 256 KKEYSSASSRTPLITLKGHKE-AISAVQWTAVDE-IITSSWDHTLK-IWDAELGGMKSEIVGNKSFFDVHYSPLSKLVIT 332 (391)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~-l~s~~~dg~i~-iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~ 332 (391)
...+..|.. .+..++|+ ++. ++.++.++.+. +||+..++......+...+..++|+|+|++|++
T Consensus 329 ------------~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~ 395 (1045)
T 1k32_A 329 ------------VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVV 395 (1045)
T ss_dssp ------------EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEE
T ss_pred ------------eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEE
Confidence 223455666 78899999 654 78888888888 999987765443322347899999999999999
Q ss_pred eeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCC----------cEEEEecC
Q psy2107 333 ASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN----------SVKLWDLR 391 (391)
Q Consensus 333 g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg----------~v~iwdlr 391 (391)
++.++.|++||+.+++ ......+|...+.+++|+| ++++|++++.++ .|++||+.
T Consensus 396 ~~~~~~v~~~d~~tg~---~~~~~~~~~~~v~~~~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 396 ANDRFEIMTVDLETGK---PTVIERSREAMITDFTISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp EETTSEEEEEETTTCC---EEEEEECSSSCCCCEEECT-TSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred ECCCCeEEEEECCCCc---eEEeccCCCCCccceEECC-CCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 9999999999998766 5555667889999999999 556677776544 89999973
No 151
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.83 E-value=6.4e-18 Score=147.90 Aligned_cols=223 Identities=13% Similarity=0.117 Sum_probs=159.8
Q ss_pred cEEEEEec--CC-EEEEEECCCeEEEEcCC-CceEEeccCCCC---------CeeEEEEEecCCCCeEEEEEe--CCCcE
Q psy2107 118 WVSAIDFH--ND-WILTGCYDHSVHIWTRR-GEHKLNIPGHGG---------PVKGVAWLYNDGKDAAFISVS--TDQTA 182 (391)
Q Consensus 118 ~V~~~~~~--~~-~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~---------~v~~l~~~~~~~~~~~l~s~~--~dg~v 182 (391)
.+.+++++ ++ +++++..++.|.+||.. ++....+..+.. .+.+++| +++++.+++++ .++.|
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---s~dg~~l~~~~~~~~~~i 166 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVA---DDATNTVYISGIGKESVI 166 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEE---ETTTTEEEEEEESSSCEE
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEE---CCCCCEEEEEecCCCceE
Confidence 35566776 56 44555667999999994 555555554332 2688999 55677666555 47889
Q ss_pred EEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107 183 MIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA 262 (391)
Q Consensus 183 ~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (391)
.+||.. ..+.+..+..+...+.+++|+|+++++++++.++.|.+||..+++.
T Consensus 167 ~~~d~~----~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~------------------------ 218 (353)
T 3vgz_A 167 WVVDGG----NIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKI------------------------ 218 (353)
T ss_dssp EEEETT----TTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEE------------------------
T ss_pred EEEcCC----CCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeE------------------------
Confidence 999954 3455566654566688999999999999999999999999976442
Q ss_pred CCCCceeeec----CccCcccEEEeccCC-eEEEEEC-CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEee-C
Q psy2107 263 SSRTPLITLK----GHKEAISAVQWTAVD-EIITSSW-DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITAS-A 335 (391)
Q Consensus 263 ~~~~~~~~~~----~~~~~v~~~~~~~~~-~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~-~ 335 (391)
...+. ++...+..++|++++ .+++++. ++.|.+||+.+++.+..+....+ ..++|+|+++++++++ .
T Consensus 219 -----~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~ 292 (353)
T 3vgz_A 219 -----LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYVTHRQ 292 (353)
T ss_dssp -----EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEEEETT
T ss_pred -----EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEEEECC
Confidence 22222 245567789999655 4655554 59999999999999888876654 5699999999665554 6
Q ss_pred CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeC
Q psy2107 336 DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF 381 (391)
Q Consensus 336 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 381 (391)
++.|.+||+.+++ ....+.. ...+.+++|+|++..++++...
T Consensus 293 ~~~v~~~d~~~~~---~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 293 AGKVSVIDAKSYK---VVKTFDT-PTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp TTEEEEEETTTTE---EEEEEEC-CSEEEEEEECTTSCEEEEEEEC
T ss_pred CCeEEEEECCCCe---EEEEEec-CCCCCeEEEcCCCCEEEEEEcc
Confidence 8999999987765 4545543 3468999999955545555544
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.83 E-value=2.3e-17 Score=144.99 Aligned_cols=252 Identities=8% Similarity=0.055 Sum_probs=156.4
Q ss_pred CCCcEEEEEec--CCEEEEEECC----CeEEEEcCCC--ceE---EeccCCCCCeeEEEEEecCCCCeEEEEEe-CCCcE
Q psy2107 115 HDDWVSAIDFH--NDWILTGCYD----HSVHIWTRRG--EHK---LNIPGHGGPVKGVAWLYNDGKDAAFISVS-TDQTA 182 (391)
Q Consensus 115 h~~~V~~~~~~--~~~l~t~~~d----g~i~iwd~~~--~~~---~~~~~~~~~v~~l~~~~~~~~~~~l~s~~-~dg~v 182 (391)
|...+..++|+ +++|++++.+ +.|.+|+++. ..+ .....+......+++ +++++++++ .++.|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~-----dg~~l~~~~~~~~~v 122 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT-----NGKNIVTANYSGGSI 122 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE-----CSSEEEEEETTTTEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE-----CCCEEEEEECCCCEE
Confidence 55566678887 6688888876 8999998732 222 233345556667776 455555555 68899
Q ss_pred EEEeecCCCCceeE--EEEEec--------CCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCCCCCcc
Q psy2107 183 MIWEWKVESNSIEC--IHVCRG--------HERGLETVTVSESRQQFATGG-WDCLLKIWSADISKERGDPSENGDEGTT 251 (391)
Q Consensus 183 ~iwd~~~~~~~~~~--~~~~~~--------~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 251 (391)
.+|++......... .....+ +...+.+++|+|+++++++++ .++.|.+|+++........ ...
T Consensus 123 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~----~~l-- 196 (361)
T 3scy_A 123 TVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNK----EKF-- 196 (361)
T ss_dssp EEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTC----CCC--
T ss_pred EEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccc----cce--
Confidence 99997532211111 111111 123458899999999776655 5789999998652210000 000
Q ss_pred ccccccccccCCCC-CceeeecCccCcccEEEeccCCe-EEEEE-CCCeEEEEecccCce--eEEEECC----eeeEEEE
Q psy2107 252 SKKRKKEYSSASSR-TPLITLKGHKEAISAVQWTAVDE-IITSS-WDHTLKIWDAELGGM--KSEIVGN----KSFFDVH 322 (391)
Q Consensus 252 ~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~-l~s~~-~dg~i~iwd~~~~~~--~~~~~~~----~~i~~~~ 322 (391)
... ........+......++|+|++. +++++ .++.|.+||+.++.. +..+... .....++
T Consensus 197 -----------~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~ 265 (361)
T 3scy_A 197 -----------LTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIH 265 (361)
T ss_dssp -----------EEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEE
T ss_pred -----------eecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEE
Confidence 000 00111122344567899998775 66666 689999999987754 2333221 2467899
Q ss_pred ECCCCCEEEEeeC--CCcEEEEcCCCCCc-ceEEEEeccccCcEEEEEECCCCCCEEEEee-CCCcEEEEec
Q psy2107 323 YSPLSKLVITASA--DKQIRLYDPKVKEG-AIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDL 390 (391)
Q Consensus 323 ~~p~~~~l~~g~~--dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwdl 390 (391)
|+|+|++|+++.. ++.|.+|++....+ ...+..+.. ...+.+++|+|++ ++|++++ .++.|.+|++
T Consensus 266 ~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg-~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 266 LSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNG-KYLLVACRDTNVIQIFER 335 (361)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTS-CEEEEEETTTTEEEEEEE
T ss_pred ECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCC-CEEEEEECCCCCEEEEEE
Confidence 9999998876665 48999999863222 223333433 4568899999954 5555555 7799999754
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.82 E-value=2.3e-18 Score=171.70 Aligned_cols=249 Identities=12% Similarity=-0.000 Sum_probs=184.6
Q ss_pred ceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccC-----------CCCCeeE
Q psy2107 94 NVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPG-----------HGGPVKG 160 (391)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~-----------~~~~v~~ 160 (391)
+...+|...... .....+..|. .+.+.+|+ |+.++.+ .++.|++|++....+..+.. |...+.+
T Consensus 224 g~~~l~~~~~~g-~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~ 300 (1045)
T 1k32_A 224 GFGQIYSTDLDG-KDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFA 300 (1045)
T ss_dssp SSCEEEEEETTS-CSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGE
T ss_pred CceEEEEEeCCC-CcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCceEeeeeccCcccccccccccccccce
Confidence 455666654211 1222333344 34445565 7777777 48999999996665555554 3447899
Q ss_pred EEEEecC-CCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCC-CeEEEEEcCCCCEEEEEeCCCcEE-EEECCCCC
Q psy2107 161 VAWLYND-GKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHER-GLETVTVSESRQQFATGGWDCLLK-IWSADISK 237 (391)
Q Consensus 161 l~~~~~~-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-~v~~l~~~~~~~~l~sg~~dg~i~-iwd~~~~~ 237 (391)
++| + |++..+++++ ++.+.+|+.. ... ...+..|.. .+..++|+ +++.|+.++.++.+. +||+.+++
T Consensus 301 ~~~---S~pdG~~la~~~-~~~i~~~~~~--~~~---~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~ 370 (1045)
T 1k32_A 301 EDF---SPLDGDLIAFVS-RGQAFIQDVS--GTY---VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK 370 (1045)
T ss_dssp EEE---EECGGGCEEEEE-TTEEEEECTT--SSB---EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC
T ss_pred eee---cCCCCCEEEEEE-cCEEEEEcCC--CCc---eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC
Confidence 999 5 6788888887 8899999854 222 233556777 89999999 999999999888888 88986522
Q ss_pred CCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECC-
Q psy2107 238 ERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGN- 315 (391)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~- 315 (391)
...+.+|...+..++|+|++. |++++.++.|++||+.+++.......+
T Consensus 371 ------------------------------~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~ 420 (1045)
T 1k32_A 371 ------------------------------AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSRE 420 (1045)
T ss_dssp ------------------------------EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS
T ss_pred ------------------------------ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCC
Confidence 223336778899999997664 888899999999999999887777544
Q ss_pred eeeEEEEECCCCCEEEEeeCCC----------cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcE
Q psy2107 316 KSFFDVHYSPLSKLVITASADK----------QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSV 385 (391)
Q Consensus 316 ~~i~~~~~~p~~~~l~~g~~dg----------~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v 385 (391)
..+.+++|+|+|++|++++.++ .|++||+.+++ ...+..|...+.+++|+| +++.|++++.++..
T Consensus 421 ~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~----~~~l~~~~~~~~~~~~sp-dG~~l~~~s~~~~~ 495 (1045)
T 1k32_A 421 AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK----IFAATTENSHDYAPAFDA-DSKNLYYLSYRSLD 495 (1045)
T ss_dssp SCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE----EEECSCSSSBEEEEEECT-TSCEEEEEESCCCC
T ss_pred CCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc----EEEeeCCCcccCCceEcC-CCCEEEEEecccCC
Confidence 4778999999999998887654 89999987643 456777888899999999 56678888888888
Q ss_pred EEEec
Q psy2107 386 KLWDL 390 (391)
Q Consensus 386 ~iwdl 390 (391)
.+|+.
T Consensus 496 ~~~~~ 500 (1045)
T 1k32_A 496 PSPDR 500 (1045)
T ss_dssp CEECS
T ss_pred cCcch
Confidence 88864
No 154
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.81 E-value=3e-17 Score=143.42 Aligned_cols=224 Identities=13% Similarity=0.109 Sum_probs=149.6
Q ss_pred CCeEEEEcC--CCceEE--eccCCCCCeeEEEEEecCCCCeEEEEEeC---CCcEEEEeecCCCCceeEEEEEecCCCCe
Q psy2107 135 DHSVHIWTR--RGEHKL--NIPGHGGPVKGVAWLYNDGKDAAFISVST---DQTAMIWEWKVESNSIECIHVCRGHERGL 207 (391)
Q Consensus 135 dg~i~iwd~--~~~~~~--~~~~~~~~v~~l~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~v 207 (391)
++.|.+|++ .+..+. ....+......++| +++++ +++++. ++.|.+|++. ....+.+..+..+...+
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~---spdg~-l~~~~~~~~~~~v~~~~~~--~g~~~~~~~~~~~~~~p 88 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLAL---SAKDC-LYSVDKEDDEGGIAAWQID--GQTAHKLNTVVAPGTPP 88 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEE---CTTCE-EEEEEEETTEEEEEEEEEE--TTEEEEEEEEEEESCCC
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEE---ccCCe-EEEEEecCCCceEEEEEec--CCcEEEeeeeecCCCCC
Confidence 456788766 333332 23345567788999 77888 554443 6899999974 34445566656677889
Q ss_pred EEEEEcCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec---------CccCc
Q psy2107 208 ETVTVSESRQQFATGG-WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK---------GHKEA 277 (391)
Q Consensus 208 ~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 277 (391)
..++|+|++++|++++ .++.|.+|++..... ...+..+. .+...
T Consensus 89 ~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~--------------------------~~~~~~~~~~~~~p~~~~~~~~ 142 (347)
T 3hfq_A 89 AYVAVDEARQLVYSANYHKGTAEVMKIAADGA--------------------------LTLTDTVQHSGHGPRPEQDGSH 142 (347)
T ss_dssp SEEEEETTTTEEEEEETTTTEEEEEEECTTSC--------------------------EEEEEEEECCCCCSSTTCSSCC
T ss_pred EEEEECCCCCEEEEEeCCCCEEEEEEeCCCCC--------------------------eeecceeecCCCCCCccccCCC
Confidence 9999999999888887 679999999953111 01111111 12335
Q ss_pred ccEEEeccCCeEEEE-ECCCeEEEEecc-cCceeEE--EEC--CeeeEEEEECCCCCEEEE-eeCCCcEEEEcCCCCCcc
Q psy2107 278 ISAVQWTAVDEIITS-SWDHTLKIWDAE-LGGMKSE--IVG--NKSFFDVHYSPLSKLVIT-ASADKQIRLYDPKVKEGA 350 (391)
Q Consensus 278 v~~~~~~~~~~l~s~-~~dg~i~iwd~~-~~~~~~~--~~~--~~~i~~~~~~p~~~~l~~-g~~dg~i~iwd~~~~~~~ 350 (391)
+.+++|+|++.++++ ..++.|++||+. +++.... +.. ...+..++|+|+|+++++ +..++.|.+|++....+.
T Consensus 143 ~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~ 222 (347)
T 3hfq_A 143 IHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGA 222 (347)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTE
T ss_pred ceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCc
Confidence 778999977665554 457899999998 5543322 222 236778999999996655 566889999998752222
Q ss_pred -eEEEEecccc------CcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 351 -IVKSTFSSHK------EWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 351 -~~~~~~~~h~------~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
.....+.... ..+..++|+|++..++++...++.|.+||+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~ 269 (347)
T 3hfq_A 223 FTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAV 269 (347)
T ss_dssp EEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEE
T ss_pred eEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEE
Confidence 1222332222 458999999965555577778999999997
No 155
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.81 E-value=6.9e-18 Score=148.51 Aligned_cols=242 Identities=8% Similarity=-0.001 Sum_probs=155.8
Q ss_pred cEEEEEec--CCEEEEEECCCeEEEEcCC-CceEEeccCC--CCCeeEEEEEecCCCCeE--EEEEe-------------
Q psy2107 118 WVSAIDFH--NDWILTGCYDHSVHIWTRR-GEHKLNIPGH--GGPVKGVAWLYNDGKDAA--FISVS------------- 177 (391)
Q Consensus 118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~~-~~~~~~~~~~--~~~v~~l~~~~~~~~~~~--l~s~~------------- 177 (391)
.+..++++ +++|++++.+ .|.+|++. ...+..+..+ .+...+++| ++++++ ++++.
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~---spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDA---DTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCT---TSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEE---CCCCCEEEEEEecCCcceeccceeec
Confidence 45677887 6688888888 99999984 3333222111 133566888 778884 44553
Q ss_pred CCCcEEEEeecCCCCceeEEEEEe-cCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECC-CCCCCCCCCCCCCCCccccc
Q psy2107 178 TDQTAMIWEWKVESNSIECIHVCR-GHERGLETVTVSESRQQFATGGW-DCLLKIWSAD-ISKERGDPSENGDEGTTSKK 254 (391)
Q Consensus 178 ~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~ 254 (391)
.+|.+.+|+++........+..+. .+...+.+++|+|+|++++++.. ++.|++||++ +++.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~---------------- 180 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV---------------- 180 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE----------------
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE----------------
Confidence 689999999753222111222221 24567999999999998887764 6799999997 4321
Q ss_pred cccccccCCCCCceeeec--CccCcccEEEeccCC-eEEEEEC-CCeEEEEecc--cCcee---EEEEC-------Ce--
Q psy2107 255 RKKEYSSASSRTPLITLK--GHKEAISAVQWTAVD-EIITSSW-DHTLKIWDAE--LGGMK---SEIVG-------NK-- 316 (391)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~-~l~s~~~-dg~i~iwd~~--~~~~~---~~~~~-------~~-- 316 (391)
..+..+. .|...+..++|+|++ .+++++. ++.|.+|++. +++.. ..+.. +.
T Consensus 181 -----------~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~ 249 (365)
T 1jof_A 181 -----------ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPE 249 (365)
T ss_dssp -----------EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTT
T ss_pred -----------EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccc
Confidence 1122222 235668899999877 4666664 7899999865 45543 22221 12
Q ss_pred -----eeEEEE-ECCCCCEEEEeeCC-C-----cEEEEcCC-CCCcceEEEEeccccCcEEEEEECCC--CCCEEEEeeC
Q psy2107 317 -----SFFDVH-YSPLSKLVITASAD-K-----QIRLYDPK-VKEGAIVKSTFSSHKEWVQSVRWSPI--DPQLFVSASF 381 (391)
Q Consensus 317 -----~i~~~~-~~p~~~~l~~g~~d-g-----~i~iwd~~-~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~~~ 381 (391)
.+..++ |+|+|++|++++.+ + .|.+|++. +++..........+...+..++|+|. ++++|++++.
T Consensus 250 ~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~ 329 (365)
T 1jof_A 250 TGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDD 329 (365)
T ss_dssp TSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECS
T ss_pred cccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEc
Confidence 478899 99999988776543 2 89999986 33311111123334555778999993 3455666665
Q ss_pred -CCcEEEEec
Q psy2107 382 -DNSVKLWDL 390 (391)
Q Consensus 382 -dg~v~iwdl 390 (391)
++.|.+|++
T Consensus 330 ~~~~v~v~~~ 339 (365)
T 1jof_A 330 QEGWLEIYRW 339 (365)
T ss_dssp SSCEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 589999986
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.81 E-value=5.8e-18 Score=158.52 Aligned_cols=261 Identities=12% Similarity=0.085 Sum_probs=174.4
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCC-CcEEEEEecCC-EEEEEEC---CCeEEE
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHD-DWVSAIDFHND-WILTGCY---DHSVHI 140 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~~~~~~~-~l~t~~~---dg~i~i 140 (391)
....|.+||+.++... ..++.+++|.... .....+..|. ..|.+++|+++ ++++++. +...++
T Consensus 25 ~~~~~~~DG~~la~~s---------~~~g~~~lw~~~~---g~~~~lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l 92 (582)
T 3o4h_A 25 YSLQGVVDGDKLLVVG---------FSEGSVNAYLYDG---GETVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHAL 92 (582)
T ss_dssp EEEEEEETTTEEEEEE---------EETTEEEEEEEET---TEEEECCSSCCSEECEECTTCSEEEEEEECSTTSCCEEE
T ss_pred heeecCCCCCeEEEEE---------ccCCceeEEEEcC---CCcEeeecccccccccccCCCCeEEEEeccCCCCcceEE
Confidence 4458999998776411 1267788998632 2234444555 68999999966 5555554 454556
Q ss_pred E--cC--CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCC
Q psy2107 141 W--TR--RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESR 216 (391)
Q Consensus 141 w--d~--~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 216 (391)
| +. .+... .+.... .+...+|+| ++++..+++++.++ +.+||+. ++. ...... +.. .+++|+|+|
T Consensus 93 ~~~~~~~~g~~~-~l~~~~-~~~~~~~s~-dg~~~~~~s~~~~~-~~l~d~~--~g~--~~~l~~-~~~--~~~~~spDG 161 (582)
T 3o4h_A 93 FKVNTSRPGEEQ-RLEAVK-PMRILSGVD-TGEAVVFTGATEDR-VALYALD--GGG--LRELAR-LPG--FGFVSDIRG 161 (582)
T ss_dssp EEEETTSTTCCE-ECTTSC-SBEEEEEEE-CSSCEEEEEECSSC-EEEEEEE--TTE--EEEEEE-ESS--CEEEEEEET
T ss_pred EEEeccCCCccc-cccCCC-CceeeeeCC-CCCeEEEEecCCCC-ceEEEcc--CCc--EEEeec-CCC--ceEEECCCC
Confidence 5 44 44444 333222 344667765 34444555555554 5599975 222 222222 222 789999999
Q ss_pred CEEEEEeCC----CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEE
Q psy2107 217 QQFATGGWD----CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IIT 291 (391)
Q Consensus 217 ~~l~sg~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s 291 (391)
++|++++.+ +.|++||+.+++ ...+..|...+..++|+|++. |++
T Consensus 162 ~~la~~~~~~~~~~~i~~~d~~~g~------------------------------~~~l~~~~~~~~~~~~SpDG~~l~~ 211 (582)
T 3o4h_A 162 DLIAGLGFFGGGRVSLFTSNLSSGG------------------------------LRVFDSGEGSFSSASISPGMKVTAG 211 (582)
T ss_dssp TEEEEEEEEETTEEEEEEEETTTCC------------------------------CEEECCSSCEEEEEEECTTSCEEEE
T ss_pred CEEEEEEEcCCCCeEEEEEcCCCCC------------------------------ceEeecCCCccccceECCCCCEEEE
Confidence 999988877 789999987633 235667888899999998775 676
Q ss_pred EECCC--eEEEEecccCceeEEEECCe-eeEEEE--------ECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecccc
Q psy2107 292 SSWDH--TLKIWDAELGGMKSEIVGNK-SFFDVH--------YSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHK 360 (391)
Q Consensus 292 ~~~dg--~i~iwd~~~~~~~~~~~~~~-~i~~~~--------~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~ 360 (391)
+..++ .|++||+.+++.. .+..+. .+..++ |+|+|.++++++.++.+++|++ ++ ... .+.
T Consensus 212 ~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~---~~~---~~~ 282 (582)
T 3o4h_A 212 LETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GE---RVE---APQ 282 (582)
T ss_dssp EECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TE---EEC---CCS
T ss_pred ccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CC---eec---cCC
Confidence 77788 8999999988877 444432 444455 9999999999999999999998 32 222 344
Q ss_pred CcEEEEEECCCCCCEEEEeeCCCc---EEEEec
Q psy2107 361 EWVQSVRWSPIDPQLFVSASFDNS---VKLWDL 390 (391)
Q Consensus 361 ~~v~~~~~~~~~~~~l~s~~~dg~---v~iwdl 390 (391)
+.|.+++|+ + +.++++++.+.. +.+||+
T Consensus 283 ~~v~~~~~s-d-g~~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 283 GNHGRVVLW-R-GKLVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp SEEEEEEEE-T-TEEEEEEEETTEEEEEEEETT
T ss_pred CceEEEEec-C-CEEEEEEcCCCCCCeEEEEcC
Confidence 678999999 4 456777777644 666654
No 157
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.80 E-value=5.3e-16 Score=131.61 Aligned_cols=233 Identities=15% Similarity=0.159 Sum_probs=166.6
Q ss_pred CCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEecc------CCCCCeeEEEEEecCCCCeEEEEEeC-CCcEEE
Q psy2107 114 LHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIP------GHGGPVKGVAWLYNDGKDAAFISVST-DQTAMI 184 (391)
Q Consensus 114 ~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~------~~~~~v~~l~~~~~~~~~~~l~s~~~-dg~v~i 184 (391)
+|-....+++++ ++++++...++.|.+||.++.....+. ++...+..+++. ++++.++++... ++.|.+
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~--~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVV--RNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEE--TTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEE--cCCCeEEEEcCCCCCEEEE
Confidence 456678899997 667888788999999999877666553 234567888883 235666666543 889999
Q ss_pred EeecCCCCceeEEEEEe-cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107 185 WEWKVESNSIECIHVCR-GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS 263 (391)
Q Consensus 185 wd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (391)
|+. . ...+..+. .+...+.+++++++++++++...++.|.+||... +
T Consensus 105 ~d~--~---g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~-------------------------- 152 (286)
T 1q7f_A 105 YNQ--Y---GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-N-------------------------- 152 (286)
T ss_dssp ECT--T---SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-C--------------------------
T ss_pred ECC--C---CcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC-C--------------------------
Confidence 982 2 23344443 2345789999999999888877889999999642 1
Q ss_pred CCCceeeec--CccCcccEEEeccCCeEEEE-ECCCeEEEEecccCceeEEEECC---eeeEEEEECCCCCEEEEeeCCC
Q psy2107 264 SRTPLITLK--GHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKSEIVGN---KSFFDVHYSPLSKLVITASADK 337 (391)
Q Consensus 264 ~~~~~~~~~--~~~~~v~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~---~~i~~~~~~p~~~~l~~g~~dg 337 (391)
.+..+. .+...+..+++++++.++.+ ..++.|++||. +++.+..+... ..+..++++|+|+++++...++
T Consensus 153 ---~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~ 228 (286)
T 1q7f_A 153 ---VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNN 228 (286)
T ss_dssp ---EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSS
T ss_pred ---EEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCC
Confidence 222222 33456789999987776555 56899999997 45666666543 4678999999999888887776
Q ss_pred -cEEEEcCCCCCcceEEEEecccc--CcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 338 -QIRLYDPKVKEGAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 338 -~i~iwd~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
.|.+||.. ++ .+..+..+. ..+.+++++| +++++++ +.|+.|++|++
T Consensus 229 ~~i~~~~~~-g~---~~~~~~~~~~~~~~~~i~~~~-~g~l~vs-~~~~~v~v~~~ 278 (286)
T 1q7f_A 229 FNLTIFTQD-GQ---LISALESKVKHAQCFDVALMD-DGSVVLA-SKDYRLYIYRY 278 (286)
T ss_dssp CEEEEECTT-SC---EEEEEEESSCCSCEEEEEEET-TTEEEEE-ETTTEEEEEEC
T ss_pred EEEEEECCC-CC---EEEEEcccCCCCcceeEEECC-CCcEEEE-CCCCeEEEEEc
Confidence 99999964 22 333443333 3478999999 5567777 57999999986
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.79 E-value=2.2e-16 Score=138.66 Aligned_cols=241 Identities=9% Similarity=0.043 Sum_probs=153.4
Q ss_pred EEEEEEC----CCeEEEEcC--C-CceEE-eccCCCCCeeEEEEEecCCCCeEEEEEeCC----CcEEEEeecCCCCcee
Q psy2107 128 WILTGCY----DHSVHIWTR--R-GEHKL-NIPGHGGPVKGVAWLYNDGKDAAFISVSTD----QTAMIWEWKVESNSIE 195 (391)
Q Consensus 128 ~l~t~~~----dg~i~iwd~--~-~~~~~-~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d----g~v~iwd~~~~~~~~~ 195 (391)
+++.|++ ++.|.+|.+ . +.... ... +......++| ++++++|++++.+ +.|.+|+++..+....
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~---spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~ 90 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIP---SADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLH 90 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEE---CTTSSEEEEEECCSSTTCEEEEEEEETTTTEEE
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEE---CCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEE
Confidence 4556644 468999976 2 22222 222 6777888999 7889989988886 8999999875545556
Q ss_pred EEEEEecCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc
Q psy2107 196 CIHVCRGHERGLETVTVSESRQQFATGG-WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH 274 (391)
Q Consensus 196 ~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (391)
.+.....+......+++ ++++|++++ .++.|.+|++........... ....... .......+
T Consensus 91 ~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~------------~~~~~g~---~~~~~~~~ 153 (361)
T 3scy_A 91 LLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASD------------VIEFKGS---GPDKERQT 153 (361)
T ss_dssp EEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSE------------EEECCCC---CSCTTTCS
T ss_pred EeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccce------------eEEccCC---CCCccccC
Confidence 66666656667788888 777777766 578999999975332111000 0000000 00000112
Q ss_pred cCcccEEEeccCCe-EEEEE-CCCeEEEEecccCce------e--------EEEECCeeeEEEEECCCCCEEEEee-CCC
Q psy2107 275 KEAISAVQWTAVDE-IITSS-WDHTLKIWDAELGGM------K--------SEIVGNKSFFDVHYSPLSKLVITAS-ADK 337 (391)
Q Consensus 275 ~~~v~~~~~~~~~~-l~s~~-~dg~i~iwd~~~~~~------~--------~~~~~~~~i~~~~~~p~~~~l~~g~-~dg 337 (391)
...+.+++|+|++. +++++ .++.|++|++..... + ...........++|+|+|+++++++ .++
T Consensus 154 ~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 233 (361)
T 3scy_A 154 MPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGG 233 (361)
T ss_dssp SCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTC
T ss_pred CCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCC
Confidence 33457899998775 55555 488999999875431 1 1222334678899999999887776 689
Q ss_pred cEEEEcCCCCCcceEEEE---eccccCcEEEEEECCCCCCEEEEeeC-CCcEEEEec
Q psy2107 338 QIRLYDPKVKEGAIVKST---FSSHKEWVQSVRWSPIDPQLFVSASF-DNSVKLWDL 390 (391)
Q Consensus 338 ~i~iwd~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~~l~s~~~-dg~v~iwdl 390 (391)
.|.+|++..+... .... ...+...+..++|+|++..++++... ++.|.+|++
T Consensus 234 ~v~v~~~~~g~~~-~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~ 289 (361)
T 3scy_A 234 TVIAFRYADGMLD-EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKV 289 (361)
T ss_dssp EEEEEEEETTEEE-EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEE
T ss_pred eEEEEEecCCceE-EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEE
Confidence 9999998754311 1222 23344567899999955433344445 589999987
No 159
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.77 E-value=1.2e-16 Score=138.69 Aligned_cols=227 Identities=10% Similarity=0.001 Sum_probs=151.4
Q ss_pred cEEEEEec--CCEE-EEEECCCeEEEEcCC-CceEEeccC-C----CCCeeEEEEEecCCCCeEEEEEe-----------
Q psy2107 118 WVSAIDFH--NDWI-LTGCYDHSVHIWTRR-GEHKLNIPG-H----GGPVKGVAWLYNDGKDAAFISVS----------- 177 (391)
Q Consensus 118 ~V~~~~~~--~~~l-~t~~~dg~i~iwd~~-~~~~~~~~~-~----~~~v~~l~~~~~~~~~~~l~s~~----------- 177 (391)
.+.+++|+ ++.+ ++++.++.|.+||+. ++.+..+.. + ...+.+++| +++++++++++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---s~dg~~l~~~~~~~~~~~~~~~ 111 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAAL---SPDGKTLAIYESPVRLELTHFE 111 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEE---CTTSSEEEEEEEEEEECSSCEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEE---CCCCCEEEEEeccccccccccc
Confidence 35677887 5554 556667999999994 444444432 1 226778999 77888888876
Q ss_pred -CCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCC--CC------
Q psy2107 178 -TDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENG--DE------ 248 (391)
Q Consensus 178 -~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~--~~------ 248 (391)
.++.|.+||+. ..+.+..+.. ...+.+++|+|++++|+++ ++.|.+||+.+++......... ..
T Consensus 112 ~~~~~i~v~d~~----~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~d 184 (337)
T 1pby_B 112 VQPTRVALYDAE----TLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPD 184 (337)
T ss_dssp ECCCEEEEEETT----TTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCB
T ss_pred ccCceEEEEECC----CCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCC
Confidence 67999999954 2344444543 4567889999999988887 6889999998776432111100 00
Q ss_pred ---Ccccccc-------------------------ccccccCCCCCc-eeeecCccCcccEEEeccCCe-EEEEECCCeE
Q psy2107 249 ---GTTSKKR-------------------------KKEYSSASSRTP-LITLKGHKEAISAVQWTAVDE-IITSSWDHTL 298 (391)
Q Consensus 249 ---~~~~~~~-------------------------~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i 298 (391)
....... .....+....+. ...+..+...+.+++|+|++. ++++ ++.|
T Consensus 185 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v 262 (337)
T 1pby_B 185 VLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVL 262 (337)
T ss_dssp CCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEE
T ss_pred ccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeE
Confidence 0000000 000111111111 122334455677899997765 5555 7999
Q ss_pred EEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc
Q psy2107 299 KIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH 359 (391)
Q Consensus 299 ~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h 359 (391)
.+||+.+++.+..+.....+.+++|+|+|++|++++.++.|++||+.+++ .+..+..+
T Consensus 263 ~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~---~~~~~~~~ 320 (337)
T 1pby_B 263 ESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE---KKGQVDLP 320 (337)
T ss_dssp EEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCC---EEEEEECG
T ss_pred EEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCc---EEEEEEcC
Confidence 99999999998888877788999999999999988889999999998766 45555433
No 160
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.77 E-value=5.2e-16 Score=134.38 Aligned_cols=235 Identities=14% Similarity=0.143 Sum_probs=169.5
Q ss_pred CCcEEEEEec--CCEEEEEECC------------------------CeEEEEcCC-CceEEecc-CCCCCeeEEEEEecC
Q psy2107 116 DDWVSAIDFH--NDWILTGCYD------------------------HSVHIWTRR-GEHKLNIP-GHGGPVKGVAWLYND 167 (391)
Q Consensus 116 ~~~V~~~~~~--~~~l~t~~~d------------------------g~i~iwd~~-~~~~~~~~-~~~~~v~~l~~~~~~ 167 (391)
-+.+.+++++ |+++++.+.+ +.|.+||.. +....... .+-.....+++ +
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~---d 99 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSI---D 99 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEE---C
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEE---C
Confidence 4578999998 6688777777 479999995 55544433 34457889999 7
Q ss_pred CCCeEEEEEeCCCcEEEEeecCCCCceeEEEEE---------ecCCCCeEEEEEcC-CCCEEEEEe-CCCcEEEEECCCC
Q psy2107 168 GKDAAFISVSTDQTAMIWEWKVESNSIECIHVC---------RGHERGLETVTVSE-SRQQFATGG-WDCLLKIWSADIS 236 (391)
Q Consensus 168 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---------~~~~~~v~~l~~~~-~~~~l~sg~-~dg~i~iwd~~~~ 236 (391)
++++++++...++.|++|+.. .. ...+..+ .++......++++| +++++++.+ .++.|++|+.+.
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~--g~-~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g- 175 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPH--SK-EGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSG- 175 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTT--CS-SCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTS-
T ss_pred CCCCEEEEECCCCEEEEEeCC--CC-eEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCC-
Confidence 788888888889999999943 21 1123333 23445789999999 888888876 689999999532
Q ss_pred CCCCCCCCCCCCCccccccccccccCCCCCceeeec----------CccCcccEEEeccC-CeEEEE-ECCCeEEEEecc
Q psy2107 237 KERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK----------GHKEAISAVQWTAV-DEIITS-SWDHTLKIWDAE 304 (391)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~-~~l~s~-~~dg~i~iwd~~ 304 (391)
. .+..+. ++-.....++++++ +.++.+ ..++.|++||..
T Consensus 176 ~-----------------------------~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 176 K-----------------------------FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp C-----------------------------EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred C-----------------------------EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 2 112221 12234678999975 665544 568899999999
Q ss_pred cCceeEEEECC---eeeEEEEECC------CCCEEEEeeCCCcEEEEcCCCCCcceEEEEe---ccccCcEEEEEECCCC
Q psy2107 305 LGGMKSEIVGN---KSFFDVHYSP------LSKLVITASADKQIRLYDPKVKEGAIVKSTF---SSHKEWVQSVRWSPID 372 (391)
Q Consensus 305 ~~~~~~~~~~~---~~i~~~~~~p------~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~ 372 (391)
+++.+..+... ..+..++++| +|+..++...+..|++|++.+++ ++..+ .++...+.+++++| +
T Consensus 227 ~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~---~~~~~~~~~~~~~~p~~ia~~~-d 302 (329)
T 3fvz_A 227 TKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGE---IIDVFKPVRKHFDMPHDIVASE-D 302 (329)
T ss_dssp TCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCC---EEEEECCSSSCCSSEEEEEECT-T
T ss_pred CCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCe---EEEEEcCCCCccCCeeEEEECC-C
Confidence 89988887533 3677899999 33333333445689999988766 55555 46777899999999 5
Q ss_pred CCEEEEeeCCCcEEEEec
Q psy2107 373 PQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 373 ~~~l~s~~~dg~v~iwdl 390 (391)
+.++++...++.|++|++
T Consensus 303 G~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 303 GTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp SEEEEEESSSCCEEEEEE
T ss_pred CCEEEEECCCCEEEEEeC
Confidence 588999999999999986
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.74 E-value=6.3e-18 Score=162.33 Aligned_cols=238 Identities=9% Similarity=0.043 Sum_probs=151.6
Q ss_pred EEEecCC-EEEEEECCCeEEEEcCCCceEEecc-CCCC---CeeEEEEEecCCCCeEEEEEeC---------CCcEEEEe
Q psy2107 121 AIDFHND-WILTGCYDHSVHIWTRRGEHKLNIP-GHGG---PVKGVAWLYNDGKDAAFISVST---------DQTAMIWE 186 (391)
Q Consensus 121 ~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~-~~~~---~v~~l~~~~~~~~~~~l~s~~~---------dg~v~iwd 186 (391)
+++|+++ .++..+.||.|++||+.+.....+. .|.. .+.+++| +|++++|++++. ++.|++||
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGL---SPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEE---CTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEE---CCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 4567622 4555567999999999654444433 3322 4899999 889999998876 78999999
Q ss_pred ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107 187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT 266 (391)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (391)
+. ++.......+ ...+..++|+|+|+.|+.+. ++.|++||+.+++...... ...
T Consensus 97 ~~--~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~--------------------~~~ 150 (719)
T 1z68_A 97 LS--NGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITF--------------------NGR 150 (719)
T ss_dssp TT--TTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCC--------------------CCB
T ss_pred CC--CCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEec--------------------CCC
Confidence 54 3221000111 35688999999999999886 7899999997754321000 000
Q ss_pred ceeeecCccCcc---------cEEEeccCCe-EEEEECCC----------------------------------eEEEEe
Q psy2107 267 PLITLKGHKEAI---------SAVQWTAVDE-IITSSWDH----------------------------------TLKIWD 302 (391)
Q Consensus 267 ~~~~~~~~~~~v---------~~~~~~~~~~-l~s~~~dg----------------------------------~i~iwd 302 (391)
....+.++...| .+++|+|++. |++++.|. .|++||
T Consensus 151 ~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d 230 (719)
T 1z68_A 151 ENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIID 230 (719)
T ss_dssp TTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEE
T ss_pred cCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEE
Confidence 011122333222 5899997765 77776542 788999
Q ss_pred cccCcee--EEE------E-CCeeeEEEEECCCCCEEEEeeCC----CcEEEEc----CCCCCcceEEEEe----ccccC
Q psy2107 303 AELGGMK--SEI------V-GNKSFFDVHYSPLSKLVITASAD----KQIRLYD----PKVKEGAIVKSTF----SSHKE 361 (391)
Q Consensus 303 ~~~~~~~--~~~------~-~~~~i~~~~~~p~~~~l~~g~~d----g~i~iwd----~~~~~~~~~~~~~----~~h~~ 361 (391)
+.+++.. ..+ . +...+..++|+||++++++.... ..|.+|| +.+++ ....+ .+|..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~---~~~~~~~~~~~~~~ 307 (719)
T 1z68_A 231 TTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWD---CPKTQEHIEESRTG 307 (719)
T ss_dssp SSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEE---CCGGGEEEEECSSS
T ss_pred CCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCc---eEEEEecccccCCc
Confidence 9987653 122 1 23478899999998877774433 2488899 66543 22222 35677
Q ss_pred cEE-----EEEECCCCCCEEE-EeeCCCc--EEEEec
Q psy2107 362 WVQ-----SVRWSPIDPQLFV-SASFDNS--VKLWDL 390 (391)
Q Consensus 362 ~v~-----~~~~~~~~~~~l~-s~~~dg~--v~iwdl 390 (391)
.+. .++|+|++..+++ ++..+|. |.+||+
T Consensus 308 ~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~ 344 (719)
T 1z68_A 308 WAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKD 344 (719)
T ss_dssp CSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESS
T ss_pred eEccccCCccEECCCCCeEEEEEEccCCceEEEEEEC
Confidence 776 8899996665444 4556664 555554
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.74 E-value=2.6e-17 Score=158.00 Aligned_cols=278 Identities=12% Similarity=0.066 Sum_probs=173.3
Q ss_pred ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCC----cEEEEEec--CCEEEEEEC-----
Q psy2107 66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDD----WVSAIDFH--NDWILTGCY----- 134 (391)
Q Consensus 66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~----~V~~~~~~--~~~l~t~~~----- 134 (391)
..-.|+++|+++... .++.+.+|...... ...+..+.. .|.+++|+ |++|+.++.
T Consensus 19 ~~~~~s~dg~~~~~~-----------~d~~i~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~ 84 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-----------ADNNIVLYNIETGQ---SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLW 84 (719)
T ss_dssp CCCEESSSSEEEEEC-----------TTSCEEEEESSSCC---EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECS
T ss_pred CccEECCCCeEEEEc-----------CCCCEEEEEcCCCc---EEEEEccccccccceeeEEECCCCCeEEEEecCceeE
Confidence 345788999877642 24567777653322 222222222 37888998 678888876
Q ss_pred ----CCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCe---
Q psy2107 135 ----DHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGL--- 207 (391)
Q Consensus 135 ----dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v--- 207 (391)
++.|++||+.+............+..++| +|+|+.|+.+. ++.|++|++.. +....+ ...++...|
T Consensus 85 ~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~---SPDG~~la~~~-~~~i~~~~~~~--g~~~~l-~~~~~~~~v~~g 157 (719)
T 1z68_A 85 RYSYTATYYIYDLSNGEFVRGNELPRPIQYLCW---SPVGSKLAYVY-QNNIYLKQRPG--DPPFQI-TFNGRENKIFNG 157 (719)
T ss_dssp SSCEEEEEEEEETTTTEECCSSCCCSSBCCEEE---CSSTTCEEEEE-TTEEEEESSTT--SCCEEC-CCCCBTTTEEES
T ss_pred EeecceEEEEEECCCCccccceecCcccccceE---CCCCCEEEEEE-CCeEEEEeCCC--CCcEEE-ecCCCcCCeEcc
Confidence 78999999976655111112356889999 78899898886 78999999642 222111 112222222
Q ss_pred --------------EEEEEcCCCCEEEEEeCCC----------------------------------cEEEEECCCCCCC
Q psy2107 208 --------------ETVTVSESRQQFATGGWDC----------------------------------LLKIWSADISKER 239 (391)
Q Consensus 208 --------------~~l~~~~~~~~l~sg~~dg----------------------------------~i~iwd~~~~~~~ 239 (391)
.+++|+|||++|++++.|. .|++||+.+++..
T Consensus 158 ~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~ 237 (719)
T 1z68_A 158 IPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYV 237 (719)
T ss_dssp SCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHH
T ss_pred cccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCcc
Confidence 5899999999999988652 5566666543210
Q ss_pred CCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEE-CC----CeEEEEe----cccCceeE
Q psy2107 240 GDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSS-WD----HTLKIWD----AELGGMKS 310 (391)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~-~d----g~i~iwd----~~~~~~~~ 310 (391)
.. ........+.+|...+..++|+|++.++... .. ..|.+|| +.+++...
T Consensus 238 ~~---------------------~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~ 296 (719)
T 1z68_A 238 GP---------------------QEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPK 296 (719)
T ss_dssp CC---------------------EECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCG
T ss_pred ce---------------------eEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEE
Confidence 00 0000001234678889999999888755442 22 2488899 77776544
Q ss_pred EE----ECC-eeeE-----EEEECCCCCEEEE--eeCCC--cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEE
Q psy2107 311 EI----VGN-KSFF-----DVHYSPLSKLVIT--ASADK--QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLF 376 (391)
Q Consensus 311 ~~----~~~-~~i~-----~~~~~p~~~~l~~--g~~dg--~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 376 (391)
.+ ..+ ..+. .+.|+|+|+.++. +..+| .|++||+..+. ...+..+...+..+.++ +++.++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~----~~~lt~~~~~v~~~~~~-d~~~i~ 371 (719)
T 1z68_A 297 TQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN----AIQITSGKWEAINIFRV-TQDSLF 371 (719)
T ss_dssp GGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT----CEECSCSSSCEEEEEEE-CSSEEE
T ss_pred EEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc----eEecccCceEEEEEEEE-eCCEEE
Confidence 43 233 2444 7899999996554 44455 57777876544 23455566668887777 576666
Q ss_pred EEeeC----CCcEEEEec
Q psy2107 377 VSASF----DNSVKLWDL 390 (391)
Q Consensus 377 ~s~~~----dg~v~iwdl 390 (391)
+++.. ++.+++|.+
T Consensus 372 ~~~~~~~~~~~~~~l~~~ 389 (719)
T 1z68_A 372 YSSNEFEEYPGRRNIYRI 389 (719)
T ss_dssp EEESCGGGCTTCBEEEEE
T ss_pred EEEecCCCCCceEEEEEE
Confidence 66554 588999975
No 163
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.72 E-value=1.1e-15 Score=145.31 Aligned_cols=244 Identities=11% Similarity=0.056 Sum_probs=162.4
Q ss_pred cccCCCCcEEEEEecCCEEE--EE--ECCCeEEEEcC-CCceEEeccCCCCCee---------EEEEEecCCCCeE-EEE
Q psy2107 111 DCILHDDWVSAIDFHNDWIL--TG--CYDHSVHIWTR-RGEHKLNIPGHGGPVK---------GVAWLYNDGKDAA-FIS 175 (391)
Q Consensus 111 ~~~~h~~~V~~~~~~~~~l~--t~--~~dg~i~iwd~-~~~~~~~~~~~~~~v~---------~l~~~~~~~~~~~-l~s 175 (391)
.+.+|...|..++++++.++ +. +.++...||.. .+.....+..+...+. ...|+. +|+++. |+.
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-SPDg~~~la~ 96 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVP-RPAGGPLLVF 96 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEEC-CSSSSCEEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeee-ecCCCeEEEE
Confidence 34568899999999987443 33 33788999984 5566667777776666 666642 267777 665
Q ss_pred EeC-CCcEEEEeecCC--C-CceeEEEEEec-----CCCCeEEEEEcCCCCEEEEEeCC----------CcEEEEECCCC
Q psy2107 176 VST-DQTAMIWEWKVE--S-NSIECIHVCRG-----HERGLETVTVSESRQQFATGGWD----------CLLKIWSADIS 236 (391)
Q Consensus 176 ~~~-dg~v~iwd~~~~--~-~~~~~~~~~~~-----~~~~v~~l~~~~~~~~l~sg~~d----------g~i~iwd~~~~ 236 (391)
++. +..|.+++ .. . .. ...+.. |...+..++|+|+|+.|+.++.+ ..|++||+.+.
T Consensus 97 ~~~~~~~l~~~~--~~~~g~~~---~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 171 (662)
T 3azo_A 97 THFGDQRLYAFE--PDAPGGAV---PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGS 171 (662)
T ss_dssp EBTTTCCEEEEC--TTSTTCCC---CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTST
T ss_pred EECCCCeEEEEc--CCCCCCCC---CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCC
Confidence 543 44555554 33 1 22 223333 56678999999999999998877 57999998751
Q ss_pred CCCCCCCCCCCCCccccccccccccCCCCCceeeec-CccCcccEEEeccCCe-EEEEECC--------CeEEEEecc-c
Q psy2107 237 KERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK-GHKEAISAVQWTAVDE-IITSSWD--------HTLKIWDAE-L 305 (391)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-l~s~~~d--------g~i~iwd~~-~ 305 (391)
... .......+. .+...+..++|+|++. |+.++.+ ..|++||+. +
T Consensus 172 ~~~------------------------~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~ 227 (662)
T 3azo_A 172 AAA------------------------DRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTED 227 (662)
T ss_dssp TTT------------------------CGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTT
T ss_pred ccc------------------------cCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCC
Confidence 000 001122333 4456778889997775 6666644 479999998 5
Q ss_pred C---ceeEEEEC-CeeeEEEEECCCCCEEEEeeCCC--cEEEEcCCCCCcceEEEEeccccCc--------EEEEEECCC
Q psy2107 306 G---GMKSEIVG-NKSFFDVHYSPLSKLVITASADK--QIRLYDPKVKEGAIVKSTFSSHKEW--------VQSVRWSPI 371 (391)
Q Consensus 306 ~---~~~~~~~~-~~~i~~~~~~p~~~~l~~g~~dg--~i~iwd~~~~~~~~~~~~~~~h~~~--------v~~~~~~~~ 371 (391)
+ +....... ...+..++|+|+|++++++..++ .|++||+..++ .......+... +.+++|+|
T Consensus 228 g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~---~~~l~~~~~~~~~p~w~~~~~~~~~~~- 303 (662)
T 3azo_A 228 GRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA---ATQLCRREEEFAGPLWTPGMRWFAPLA- 303 (662)
T ss_dssp SCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCC---EEESSCCSSBSSCCCCSTTCCSEEECT-
T ss_pred CcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCc---eeecccccccccCccccccCceEeEeC-
Confidence 6 44444444 46788999999999888888788 66677765544 33233333222 56788998
Q ss_pred CCCEEEEeeCCCcEEEEe
Q psy2107 372 DPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 372 ~~~~l~s~~~dg~v~iwd 389 (391)
++.++++++. +.++||.
T Consensus 304 ~~~~~~~~~~-~~~~l~~ 320 (662)
T 3azo_A 304 NGLIAVVHGK-GAAVLGI 320 (662)
T ss_dssp TSCEEEEEBS-SSCEEEE
T ss_pred CCEEEEEEEc-CccEEEE
Confidence 6678899988 9999994
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.70 E-value=1.5e-14 Score=127.07 Aligned_cols=230 Identities=8% Similarity=0.051 Sum_probs=144.5
Q ss_pred EEEEEECC--CeEEEEcC--CCceEEecc----CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEE
Q psy2107 128 WILTGCYD--HSVHIWTR--RGEHKLNIP----GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHV 199 (391)
Q Consensus 128 ~l~t~~~d--g~i~iwd~--~~~~~~~~~----~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 199 (391)
.++.|++. +.|.+|++ .+..+..+. .....+..++| ++++++|++++.+ .|.+|++.. ......+..
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~---spdg~~l~~~~~~-~v~~~~~~~-~g~~~~~~~ 78 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTF---DHERKNIYGAAMK-KWSSFAVKS-PTEIVHEAS 78 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEE---CTTSSEEEEEEBT-EEEEEEEEE-TTEEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEE---CCCCCEEEEEccc-eEEEEEECC-CCCEEEeeE
Confidence 45666664 56887765 333332221 23346788999 7889989888887 999999752 222222222
Q ss_pred EecCCCCeEEEEEcCCCCE--EEEEe-------------CCCcEEEEECCC-CCCCCCCCCCCCCCccccccccccccCC
Q psy2107 200 CRGHERGLETVTVSESRQQ--FATGG-------------WDCLLKIWSADI-SKERGDPSENGDEGTTSKKRKKEYSSAS 263 (391)
Q Consensus 200 ~~~~~~~v~~l~~~~~~~~--l~sg~-------------~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (391)
...+ +.+.+++|+|++++ +++++ .+|.+.+|+++. ++.
T Consensus 79 ~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~------------------------- 132 (365)
T 1jof_A 79 HPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKL------------------------- 132 (365)
T ss_dssp EECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCE-------------------------
T ss_pred eecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcC-------------------------
Confidence 2211 23566899999994 45553 689999999963 211
Q ss_pred CCCceeeec-CccCcccEEEeccCCe-EEEEE-CCCeEEEEecc-cCcee--EEEEC---CeeeEEEEECCCCCEEEEee
Q psy2107 264 SRTPLITLK-GHKEAISAVQWTAVDE-IITSS-WDHTLKIWDAE-LGGMK--SEIVG---NKSFFDVHYSPLSKLVITAS 334 (391)
Q Consensus 264 ~~~~~~~~~-~~~~~v~~~~~~~~~~-l~s~~-~dg~i~iwd~~-~~~~~--~~~~~---~~~i~~~~~~p~~~~l~~g~ 334 (391)
...+..+. .+...+.+++|+|++. ++++. .++.|++||+. +++.. ..+.. ...+..++|+|+|+++++++
T Consensus 133 -~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~ 211 (365)
T 1jof_A 133 -EKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALM 211 (365)
T ss_dssp -EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEE
T ss_pred -cceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEE
Confidence 00111111 2456788999998775 66655 36899999998 67653 33431 34688999999999988776
Q ss_pred C-CCcEEEEcCCCCCcceE-----EEEec----cccC------cEEEEE-ECCCCCCEEEEeeC-CC-----cEEEEec
Q psy2107 335 A-DKQIRLYDPKVKEGAIV-----KSTFS----SHKE------WVQSVR-WSPIDPQLFVSASF-DN-----SVKLWDL 390 (391)
Q Consensus 335 ~-dg~i~iwd~~~~~~~~~-----~~~~~----~h~~------~v~~~~-~~~~~~~~l~s~~~-dg-----~v~iwdl 390 (391)
. ++.|.+|++....+... +..+. +|.. .+..++ |+|++ ++|++++. ++ .|.+|++
T Consensus 212 ~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG-~~l~v~~~~~~~~~~~~i~v~~~ 289 (365)
T 1jof_A 212 EAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSG-KYMFASSRANKFELQGYIAGFKL 289 (365)
T ss_dssp TTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTS-SEEEEEEEESSTTSCCEEEEEEE
T ss_pred CCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCC-CEEEEECCCCCCCCCCeEEEEEE
Confidence 4 68999997653222211 11222 2232 589999 99954 55555443 33 8999987
No 165
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.69 E-value=3.2e-14 Score=136.20 Aligned_cols=247 Identities=11% Similarity=-0.020 Sum_probs=160.7
Q ss_pred CCCcEEEEEec--CCEEEEEECCC-----eEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCc------
Q psy2107 115 HDDWVSAIDFH--NDWILTGCYDH-----SVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQT------ 181 (391)
Q Consensus 115 h~~~V~~~~~~--~~~l~t~~~dg-----~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~------ 181 (391)
|...+..++|+ |++||.++.++ .|++||+.+............+..++| +++++.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~w---spDg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAW---THDGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEE---CTTSSEEEEEECCCCSSCCSS
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEE---EeCCCEEEEEEECCccccccc
Confidence 54568889998 56777666543 899999966554432222223678999 778999998888766
Q ss_pred ----------EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEECCCCCCCCCCCCCC
Q psy2107 182 ----------AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW-----DCLLKIWSADISKERGDPSENG 246 (391)
Q Consensus 182 ----------v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-----dg~i~iwd~~~~~~~~~~~~~~ 246 (391)
|++|++.........+.....|...+..+.|+|+|++|+.++. +..|.+||+.+.....
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~------ 273 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGI------ 273 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSS------
T ss_pred cccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccccc------
Confidence 8999864322222233333334556889999999999987765 5689999986510000
Q ss_pred CCCccccccccccccCCCCCceeeecCccCcccEEEec-cCCeEEEEECC----CeEEEEecccCce--eEEEECC-e--
Q psy2107 247 DEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-AVDEIITSSWD----HTLKIWDAELGGM--KSEIVGN-K-- 316 (391)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~d----g~i~iwd~~~~~~--~~~~~~~-~-- 316 (391)
........+..+...+... |+ +++.|+..+.. +.|.+||+.++.. ...+..+ .
T Consensus 274 ----------------~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 336 (710)
T 2xdw_A 274 ----------------TGILKWVKLIDNFEGEYDY-VTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKD 336 (710)
T ss_dssp ----------------CSSCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC
T ss_pred ----------------CCccceEEeeCCCCcEEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCC
Confidence 0000233444555555543 55 45566655543 3699999987742 2344333 2
Q ss_pred eeEEEEECCCCCEEEEeeCCCc--EEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeC---CCcEEEEec
Q psy2107 317 SFFDVHYSPLSKLVITASADKQ--IRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF---DNSVKLWDL 390 (391)
Q Consensus 317 ~i~~~~~~p~~~~l~~g~~dg~--i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---dg~v~iwdl 390 (391)
.+..++|++++.+++++..++. |++|++.+++ ....+..+.+.+..++++|++..++++.+. .+.|++||+
T Consensus 337 ~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~---~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 337 VLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGA---LLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETTTCC---EEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET
T ss_pred eEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCC---EEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence 5778899887888888888874 5666765544 445566677889999999965555555443 478999986
No 166
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.69 E-value=3.5e-15 Score=130.19 Aligned_cols=221 Identities=6% Similarity=-0.023 Sum_probs=141.6
Q ss_pred cEEEEEec--CCEE-EEEECCCeEEEEcCCC-ceEEeccCC------CCCeeEEEEEecCCCCeEEEEEeCC--------
Q psy2107 118 WVSAIDFH--NDWI-LTGCYDHSVHIWTRRG-EHKLNIPGH------GGPVKGVAWLYNDGKDAAFISVSTD-------- 179 (391)
Q Consensus 118 ~V~~~~~~--~~~l-~t~~~dg~i~iwd~~~-~~~~~~~~~------~~~v~~l~~~~~~~~~~~l~s~~~d-------- 179 (391)
.+..++|+ ++.+ +++..++.|.+||+.+ +....+... ...+.+++| +++++++++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~---spdg~~l~~~~~~~~~~~~~~ 120 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAI---SPDGKEVYATVNPTQRLNDHY 120 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEE---CTTSSEEEEEEEEEEECSSCE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEE---CCCCCEEEEEccccccccccc
Confidence 45677787 5544 5556789999999954 444444422 233788999 7789888888865
Q ss_pred ----CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCC--CCCcc--
Q psy2107 180 ----QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENG--DEGTT-- 251 (391)
Q Consensus 180 ----g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~-- 251 (391)
+.|.+||+.... ....+..+.. ...+.+++|+|+++ +++++. .|.+||..+++......... .....
T Consensus 121 ~~~~~~i~~~d~~~~~-~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 195 (349)
T 1jmx_B 121 VVKPPRLEVFSTADGL-EAKPVRTFPM-PRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAP 195 (349)
T ss_dssp EECCCEEEEEEGGGGG-GBCCSEEEEC-CSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCC
T ss_pred ccCCCeEEEEECCCcc-ccceeeeccC-CCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCc
Confidence 899999975321 1222333333 34688999999999 555543 49999998766432211110 00000
Q ss_pred --------c-------ccccccc-------------------ccCCCCC-ceeeecCccCcccEEEecc-CCe-EEEEEC
Q psy2107 252 --------S-------KKRKKEY-------------------SSASSRT-PLITLKGHKEAISAVQWTA-VDE-IITSSW 294 (391)
Q Consensus 252 --------~-------~~~~~~~-------------------~~~~~~~-~~~~~~~~~~~v~~~~~~~-~~~-l~s~~~ 294 (391)
. ....... .+..... ....+..+...+..++|+| ++. ++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-- 273 (349)
T 1jmx_B 196 DVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-- 273 (349)
T ss_dssp BCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--
T ss_pred cceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--
Confidence 0 0000000 0000000 0111122344567888888 775 4444
Q ss_pred CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107 295 DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348 (391)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~ 348 (391)
++.|.+||+.+++.+..+.....+.+++|+|++++|++++.++.|++||+.+.+
T Consensus 274 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 274 LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEeccccc
Confidence 899999999999998888877778899999999988888889999999987755
No 167
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.69 E-value=7.4e-14 Score=117.22 Aligned_cols=209 Identities=7% Similarity=0.018 Sum_probs=155.8
Q ss_pred CCEEEEEECCCeEEEEcC-CCceEEeccCCC-CCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC
Q psy2107 126 NDWILTGCYDHSVHIWTR-RGEHKLNIPGHG-GPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH 203 (391)
Q Consensus 126 ~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~-~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 203 (391)
+++|++++.|+.|.+||. +++.+.++..+. ..+.++.+ .+++++++ +.++.|..||. +.+.+..+..+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~---~pdG~ilv--s~~~~V~~~d~-----~G~~~W~~~~~ 74 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAA---TKAGEILF--SYSKGAKMITR-----DGRELWNIAAP 74 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEE---CTTSCEEE--ECBSEEEEECT-----TSCEEEEEECC
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEE---CCCCCEEE--eCCCCEEEECC-----CCCEEEEEcCC
Confidence 568999999999999999 888888888765 47888998 67888888 45788999983 23456666654
Q ss_pred -CCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec------Ccc
Q psy2107 204 -ERGLETVTVSESRQQFATGGW-DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK------GHK 275 (391)
Q Consensus 204 -~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 275 (391)
...+.++.+.++|+++++.+. ++.|..+|.+ ++. +..+. .+.
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk~-----------------------------l~~~~~~~~~~~~~ 124 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGHPSTILEVNMK-GEV-----------------------------LSKTEFETGIERPH 124 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEESTTEEEEEECTT-SCE-----------------------------EEEEEECCSCSSGG
T ss_pred CCccccccEECCCCCEEEEecCCCCEEEEEeCC-CCE-----------------------------EEEEeccCCCCccc
Confidence 347889999999999999887 7777777753 221 11111 122
Q ss_pred CcccEEEeccC-CeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEE
Q psy2107 276 EAISAVQWTAV-DEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKS 354 (391)
Q Consensus 276 ~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 354 (391)
.....+++.++ +.+++...++.|..||.. |+.+.++.......++...++|+++++++.++.|..+|..+++ .+.
T Consensus 125 ~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~---~~w 200 (276)
T 3no2_A 125 AQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR---IVR 200 (276)
T ss_dssp GSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCC---EEE
T ss_pred ccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCc---EEE
Confidence 23445566644 457777789999999998 9999999887767778889999999999888899999988776 555
Q ss_pred Eecccc------CcEEEEEECCCCCCEEEEe
Q psy2107 355 TFSSHK------EWVQSVRWSPIDPQLFVSA 379 (391)
Q Consensus 355 ~~~~h~------~~v~~~~~~~~~~~~l~s~ 379 (391)
.+..+. ..+..++..+ ++.++++.
T Consensus 201 ~~~~~~~~~~~l~~~~~~~~~~-~G~i~v~~ 230 (276)
T 3no2_A 201 RVNANDIEGVQLFFVAQLFPLQ-NGGLYICN 230 (276)
T ss_dssp EEEGGGSBSCCCSEEEEEEECT-TSCEEEEE
T ss_pred EecCCCCCCccccccccceEcC-CCCEEEEe
Confidence 554332 2378888888 66666665
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.68 E-value=2.2e-15 Score=144.91 Aligned_cols=241 Identities=9% Similarity=0.119 Sum_probs=149.8
Q ss_pred EEEEEec--CCEEEEEECCCeEEEEcCC-CceEEeccCCCCC-----eeEEEEEecCCCCeEEEEEeCC---------Cc
Q psy2107 119 VSAIDFH--NDWILTGCYDHSVHIWTRR-GEHKLNIPGHGGP-----VKGVAWLYNDGKDAAFISVSTD---------QT 181 (391)
Q Consensus 119 V~~~~~~--~~~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~-----v~~l~~~~~~~~~~~l~s~~~d---------g~ 181 (391)
..+++|+ +++++++ ||.|++||+. +.....+..|... ...++| +|++++|+.++.+ +.
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSI---SPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEE---CTTSSEEEEEEEEEECSSSCEEEE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEE---CCCCCEEEEEECCeeeEEEccceE
Confidence 4467887 4466665 9999999994 4445555555532 234788 8899999998876 55
Q ss_pred EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccccccc
Q psy2107 182 AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSS 261 (391)
Q Consensus 182 v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (391)
+.+||+. ++. ...+..|...+...+|||+|+.||.+. ++.|++|++.++....... .
T Consensus 94 ~~~~d~~--~~~---~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~-~---------------- 150 (740)
T 4a5s_A 94 YDIYDLN--KRQ---LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITW-T---------------- 150 (740)
T ss_dssp EEEEETT--TTE---ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCS-C----------------
T ss_pred EEEEECC--CCc---EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcC-C----------------
Confidence 6799954 332 233556778899999999999998884 6899999997755321100 0
Q ss_pred CCCCCceeeecCcc---------CcccEEEeccCCe-EEEEECC------------------------------------
Q psy2107 262 ASSRTPLITLKGHK---------EAISAVQWTAVDE-IITSSWD------------------------------------ 295 (391)
Q Consensus 262 ~~~~~~~~~~~~~~---------~~v~~~~~~~~~~-l~s~~~d------------------------------------ 295 (391)
......+.++. .....+.|+|++. |+.++.|
T Consensus 151 ---g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~ 227 (740)
T 4a5s_A 151 ---GKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPT 227 (740)
T ss_dssp ---CBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCE
T ss_pred ---CCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCe
Confidence 00111122222 1223577887664 5555322
Q ss_pred CeEEEEeccc---Cc--eeEEEE-------CCeeeEEEEECCCCCEEEEeeC----CCcEEEEcCCCCCc----ce-EEE
Q psy2107 296 HTLKIWDAEL---GG--MKSEIV-------GNKSFFDVHYSPLSKLVITASA----DKQIRLYDPKVKEG----AI-VKS 354 (391)
Q Consensus 296 g~i~iwd~~~---~~--~~~~~~-------~~~~i~~~~~~p~~~~l~~g~~----dg~i~iwd~~~~~~----~~-~~~ 354 (391)
..|++||+.+ ++ ....+. ....+..++|+|+|+.++.... +..|++||+.+++. .. ...
T Consensus 228 ~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l 307 (740)
T 4a5s_A 228 VKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQH 307 (740)
T ss_dssp EEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCE
T ss_pred eEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEe
Confidence 1588899988 73 223333 3346889999999997665432 34799999887651 00 001
Q ss_pred EeccccCcEE-----EEEECCCCCCEEEEee-CCC--cEEEEec
Q psy2107 355 TFSSHKEWVQ-----SVRWSPIDPQLFVSAS-FDN--SVKLWDL 390 (391)
Q Consensus 355 ~~~~h~~~v~-----~~~~~~~~~~~l~s~~-~dg--~v~iwdl 390 (391)
.-.+|...|. ..+|+||+..+++..+ .+| .|++||+
T Consensus 308 ~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~ 351 (740)
T 4a5s_A 308 IEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQI 351 (740)
T ss_dssp EEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEET
T ss_pred eeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEEC
Confidence 1134655554 7889995554442554 444 4666664
No 169
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.68 E-value=1.1e-14 Score=129.08 Aligned_cols=232 Identities=11% Similarity=0.048 Sum_probs=147.1
Q ss_pred EEec--CCEEEEEEC-CC--eEEEEcCCCceEEec-cCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCcee
Q psy2107 122 IDFH--NDWILTGCY-DH--SVHIWTRRGEHKLNI-PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE 195 (391)
Q Consensus 122 ~~~~--~~~l~t~~~-dg--~i~iwd~~~~~~~~~-~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 195 (391)
.+|+ |+.|+.++. +| .|.+||+.+.....+ ..+...+..+.| +++++.|+.++.++.|++||+. +....
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~---spdg~~l~~~~~~~~l~~~d~~--~g~~~ 115 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFL---SPDDDALFYVKDGRNLMRVDLA--TLEEN 115 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEE---CTTSSEEEEEETTTEEEEEETT--TCCEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEE---cCCCCEEEEEeCCCeEEEEECC--CCcce
Confidence 5676 778888887 67 488889866555544 445555557889 8899999999999999999964 33323
Q ss_pred EEEEEecCCCCeEEEE--EcCCCCEEEEE----------------------eCCCcEEEEECCCCCCCCCCCCCCCCCcc
Q psy2107 196 CIHVCRGHERGLETVT--VSESRQQFATG----------------------GWDCLLKIWSADISKERGDPSENGDEGTT 251 (391)
Q Consensus 196 ~~~~~~~~~~~v~~l~--~~~~~~~l~sg----------------------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 251 (391)
.....+...+.... ++|++++++.. ..+..|.+||+.+++
T Consensus 116 --~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~-------------- 179 (388)
T 3pe7_A 116 --VVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE-------------- 179 (388)
T ss_dssp --EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC--------------
T ss_pred --eeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc--------------
Confidence 33344455454343 48999988743 234678888887632
Q ss_pred ccccccccccCCCCCceeeecCccCcccEEEecc-CCe-EEEEECC------CeEEEEecccCceeEEEECC--eeeEEE
Q psy2107 252 SKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDE-IITSSWD------HTLKIWDAELGGMKSEIVGN--KSFFDV 321 (391)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~-l~s~~~d------g~i~iwd~~~~~~~~~~~~~--~~i~~~ 321 (391)
...+..+...+..+.|+| ++. |+.++.+ ..|.++|+..+......... ..+...
T Consensus 180 ----------------~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 243 (388)
T 3pe7_A 180 ----------------STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHE 243 (388)
T ss_dssp ----------------EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEE
T ss_pred ----------------eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccc
Confidence 233444566788999999 765 5555543 37888887765543333333 357788
Q ss_pred EECCCCCEEEEeeC-CC----cEEEEcCCCCCcceEEEEeccccCc---EEEEEECCCCCCEEEEe--------eCCCcE
Q psy2107 322 HYSPLSKLVITASA-DK----QIRLYDPKVKEGAIVKSTFSSHKEW---VQSVRWSPIDPQLFVSA--------SFDNSV 385 (391)
Q Consensus 322 ~~~p~~~~l~~g~~-dg----~i~iwd~~~~~~~~~~~~~~~h~~~---v~~~~~~~~~~~~l~s~--------~~dg~v 385 (391)
+|+|+|+.|+..+. ++ .|++||+.+++.. .+..+.++... ...++|+|++..++++. ..+..|
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i 322 (388)
T 3pe7_A 244 FWVPDGSALVYVSYLKGSPDRFIYSADPETLENR-QLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFL 322 (388)
T ss_dssp EECTTSSCEEEEEEETTCCCEEEEEECTTTCCEE-EEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEE
T ss_pred eECCCCCEEEEEecCCCCCcceEEEEecCCCceE-EEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEE
Confidence 99999997765443 22 3999999876532 22233331111 11236999665544433 456789
Q ss_pred EEEecC
Q psy2107 386 KLWDLR 391 (391)
Q Consensus 386 ~iwdlr 391 (391)
++||+.
T Consensus 323 ~~~d~~ 328 (388)
T 3pe7_A 323 YVFNMK 328 (388)
T ss_dssp EEEETT
T ss_pred EEEecc
Confidence 999973
No 170
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.68 E-value=4.6e-14 Score=120.25 Aligned_cols=225 Identities=8% Similarity=0.056 Sum_probs=152.2
Q ss_pred CCCcEEEEEec--CC-EEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107 115 HDDWVSAIDFH--ND-WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES 191 (391)
Q Consensus 115 h~~~V~~~~~~--~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 191 (391)
+.....+++|+ ++ +++++..++.|..|+..+. ...+..+...+.++++ ++++.++++...++.|.+||.. +
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~---~~dg~l~v~~~~~~~i~~~d~~--~ 99 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCL---NKQGHLIACSHGLRRLERQREP--G 99 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEE---CTTCCEEEEETTTTEEEEECST--T
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeE---CCCCcEEEEecCCCeEEEEcCC--C
Confidence 44567788887 66 7888888999999999776 6666677788999999 7788888777777899999953 3
Q ss_pred CceeEEEEE-ec-CCCCeEEEEEcCCCCEEEE----EeC-------------CCcEEEEECCCCCCCCCCCCCCCCCccc
Q psy2107 192 NSIECIHVC-RG-HERGLETVTVSESRQQFAT----GGW-------------DCLLKIWSADISKERGDPSENGDEGTTS 252 (391)
Q Consensus 192 ~~~~~~~~~-~~-~~~~v~~l~~~~~~~~l~s----g~~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 252 (391)
.....+... .+ ....+..++++|+|+++++ |+. .+.|..++..
T Consensus 100 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~------------------ 161 (296)
T 3e5z_A 100 GEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD------------------ 161 (296)
T ss_dssp CCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT------------------
T ss_pred CcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC------------------
Confidence 332222111 11 1234678999999998887 331 2344444432
Q ss_pred cccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecc-cCce---eEEEE-CCeeeEEEEECCC
Q psy2107 253 KKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAE-LGGM---KSEIV-GNKSFFDVHYSPL 326 (391)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~-~~~~---~~~~~-~~~~i~~~~~~p~ 326 (391)
.....+..+......++|++++. +++.+.++.|.+||+. ++.. ...+. ....+..++++++
T Consensus 162 -------------g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~ 228 (296)
T 3e5z_A 162 -------------GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAG 228 (296)
T ss_dssp -------------SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTT
T ss_pred -------------CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCC
Confidence 12223344555668899997665 5555668899999987 5554 22331 1224567999999
Q ss_pred CCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEE-CCCCCCEEEEeeCCCc
Q psy2107 327 SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRW-SPIDPQLFVSASFDNS 384 (391)
Q Consensus 327 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~~~l~s~~~dg~ 384 (391)
|+++++. ++.|.+||.. ++ ....+..+.. +++++| .| ++..|+.++.++.
T Consensus 229 G~l~v~~--~~~v~~~~~~-g~---~~~~~~~~~~-~~~~~f~~~-d~~~L~v~t~~~l 279 (296)
T 3e5z_A 229 GLIWASA--GDGVHVLTPD-GD---ELGRVLTPQT-TSNLCFGGP-EGRTLYMTVSTEF 279 (296)
T ss_dssp SCEEEEE--TTEEEEECTT-SC---EEEEEECSSC-CCEEEEEST-TSCEEEEEETTEE
T ss_pred CCEEEEc--CCeEEEECCC-CC---EEEEEECCCC-ceeEEEECC-CCCEEEEEcCCeE
Confidence 9877665 7889999975 33 4556666666 899999 57 5555666666643
No 171
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.67 E-value=1.1e-13 Score=116.24 Aligned_cols=231 Identities=9% Similarity=-0.014 Sum_probs=155.6
Q ss_pred cEEEEEec--CCEEE-EEECCCeEEEEcCCCceEEec-cCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCc
Q psy2107 118 WVSAIDFH--NDWIL-TGCYDHSVHIWTRRGEHKLNI-PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNS 193 (391)
Q Consensus 118 ~V~~~~~~--~~~l~-t~~~dg~i~iwd~~~~~~~~~-~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 193 (391)
...+++++ +++++ +.+.++.|.+|+..+.....+ ..+...+.++++ ++++.++++.. ++.|.+||.. ...
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~---~~~g~l~v~~~-~~~i~~~d~~--~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAV---DGAGTVYVTDF-NNRVVTLAAG--SNN 98 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEE---CTTCCEEEEET-TTEEEEECTT--CSC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEE---CCCCCEEEEcC-CCEEEEEeCC--Cce
Confidence 66788886 55666 446789999999855443333 233356788999 67777666655 8899999843 222
Q ss_pred eeEEEEEe-cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec
Q psy2107 194 IECIHVCR-GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK 272 (391)
Q Consensus 194 ~~~~~~~~-~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (391)
. ..+. .....+..++++++++++++...++.|.+|+..+.. ......
T Consensus 99 ~---~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~-----------------------------~~~~~~ 146 (270)
T 1rwi_B 99 Q---TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKT-----------------------------QTVLPF 146 (270)
T ss_dssp C---EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCS-----------------------------CEECCC
T ss_pred E---eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCce-----------------------------eEeecc
Confidence 1 1222 223578999999999977777778899999754311 111111
Q ss_pred CccCcccEEEeccCCeEEEEE-CCCeEEEEecccCceeEEEECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcc
Q psy2107 273 GHKEAISAVQWTAVDEIITSS-WDHTLKIWDAELGGMKSEIVGN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGA 350 (391)
Q Consensus 273 ~~~~~v~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~ 350 (391)
.....+..+++++++.++.+. .++.|.+||............. ..+..++++++|.++++...++.|.+|+.....
T Consensus 147 ~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~-- 224 (270)
T 1rwi_B 147 TGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT-- 224 (270)
T ss_dssp CSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC--
T ss_pred ccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc--
Confidence 223456789999766655554 5789999998766544322222 467889999999887777778899999986543
Q ss_pred eEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 351 IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 351 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
.......+...+.++++++ ++.++++...++.|+++++
T Consensus 225 -~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 225 -STVLPFTGLNTPLAVAVDS-DRTVYVADRGNDRVVKLTS 262 (270)
T ss_dssp -CEECCCCSCSCEEEEEECT-TCCEEEEEGGGTEEEEECC
T ss_pred -ceeeccCCCCCceeEEECC-CCCEEEEECCCCEEEEEcC
Confidence 2222223345789999999 4578889889999999986
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.67 E-value=2.2e-14 Score=124.37 Aligned_cols=235 Identities=11% Similarity=0.082 Sum_probs=157.9
Q ss_pred cEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCcee
Q psy2107 118 WVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE 195 (391)
Q Consensus 118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 195 (391)
.|.+++|+ +..++..+.++.++.| .+.....+..+...+.+++| ++++.+++++..++.|.+||.. ...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~g~l~~~~~~~~~i~~~d~~--~~~-- 77 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTI--TAEPWLEISKKGLQLEGLNF---DRQGQLFLLDVFEGNIFKINPE--TKE-- 77 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEE--ECEEEEEEESSCCCEEEEEE---CTTSCEEEEETTTCEEEEECTT--TCC--
T ss_pred ccceeeecCCccceeEEeecccCccc--ccceeEEEeccCccccCcEE---CCCCCEEEEECCCCEEEEEeCC--CCc--
Confidence 45667777 3355555778888888 45555666677777899999 7788888888889999999843 332
Q ss_pred EEEEEecCCCCeEEEEEcCCCCEEEEEeCC----CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee
Q psy2107 196 CIHVCRGHERGLETVTVSESRQQFATGGWD----CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL 271 (391)
Q Consensus 196 ~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (391)
.......+...+.+++++++++++++...+ +.|.+||.+++... .....
T Consensus 78 ~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~---------------------------~~~~~ 130 (333)
T 2dg1_A 78 IKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ---------------------------DIIED 130 (333)
T ss_dssp EEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE---------------------------EEECS
T ss_pred EEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE---------------------------EEEcc
Confidence 222223456789999999999988777666 68999998763320 00000
Q ss_pred cCccCcccEEEeccCCeEEEEECC-------CeEEEEecccCceeEEEECCeeeEEEEECCCCCEEE-EeeCCCcEEEEc
Q psy2107 272 KGHKEAISAVQWTAVDEIITSSWD-------HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVI-TASADKQIRLYD 343 (391)
Q Consensus 272 ~~~~~~v~~~~~~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~-~g~~dg~i~iwd 343 (391)
..+...+..+++++++.++.++.. +.|..+|..+++..........+..++|+|+++.|+ +.+.++.|++||
T Consensus 131 ~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d 210 (333)
T 2dg1_A 131 LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIA 210 (333)
T ss_dssp SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEE
T ss_pred CccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEE
Confidence 123456788999987776666553 567777766555443333223567899999998654 445678999999
Q ss_pred CCCCCcce------EEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 344 PKVKEGAI------VKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 344 ~~~~~~~~------~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
+....... ....+.++ ..+..+++++ +++++++...++.|.+||.
T Consensus 211 ~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~-~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 211 LEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDS-DDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp ECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBT-TCCEEEEEETTTEEEEECT
T ss_pred ecCCCcCcccccceEEEecCCC-CCCCceEECC-CCCEEEEEcCCCEEEEECC
Confidence 86421111 11112222 4688999999 5677777777899999985
No 173
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.67 E-value=7.4e-14 Score=121.81 Aligned_cols=220 Identities=12% Similarity=0.173 Sum_probs=141.7
Q ss_pred CcEEEEEecCCEEEEEE---------CCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC---CcEEE
Q psy2107 117 DWVSAIDFHNDWILTGC---------YDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD---QTAMI 184 (391)
Q Consensus 117 ~~V~~~~~~~~~l~t~~---------~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d---g~v~i 184 (391)
..+...+++|+.++... .++.|.+||+.+.....+ ..+..++| +|+++.|+.++.+ +...+
T Consensus 15 ~~~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~~~~~~---SpDg~~la~~~~~~~~~~~~l 87 (347)
T 2gop_A 15 AYLSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENATMPRI---SPDGKKIAFMRANEEKKVSEI 87 (347)
T ss_dssp CEEEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESCEEEEE---CTTSSEEEEEEEETTTTEEEE
T ss_pred EEcccceECCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccCCCeEE---CCCCCEEEEEEeccCCCcceE
Confidence 45666666777666542 367899999966555555 56888999 7889888877654 45444
Q ss_pred EeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC---------------------------CcEEEEECCCCC
Q psy2107 185 WEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD---------------------------CLLKIWSADISK 237 (391)
Q Consensus 185 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d---------------------------g~i~iwd~~~~~ 237 (391)
|-++...+... ..... .. +..++|+|+++.|+.++.+ ..|.+||+.+++
T Consensus 88 ~~~~~~~g~~~--~l~~~-~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 163 (347)
T 2gop_A 88 WVADLETLSSK--KILEA-KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE 163 (347)
T ss_dssp EEEETTTTEEE--EEEEE-SE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred EEEECCCCceE--EEEcC-CC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence 44334343322 22222 33 9999999999998887643 457778876522
Q ss_pred CCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECC------C-eEEEEecccCceeE
Q psy2107 238 ERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWD------H-TLKIWDAELGGMKS 310 (391)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d------g-~i~iwd~~~~~~~~ 310 (391)
.+..+.. . .+..+.|+|++.++++..+ . ...+|.+.+++...
T Consensus 164 -----------------------------~~~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 212 (347)
T 2gop_A 164 -----------------------------VIEEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGKEEK 212 (347)
T ss_dssp -----------------------------EEEEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTEEEE
T ss_pred -----------------------------EEeeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeCCCceEE
Confidence 2123333 3 7889999987755555443 2 34555444554433
Q ss_pred EEECCeeeEEEEECCCCCEEEEeeCC--------CcEEEEcCCCCCcceEEEEeccccCcEEE-EEECCCCCCEEEEeeC
Q psy2107 311 EIVGNKSFFDVHYSPLSKLVITASAD--------KQIRLYDPKVKEGAIVKSTFSSHKEWVQS-VRWSPIDPQLFVSASF 381 (391)
Q Consensus 311 ~~~~~~~i~~~~~~p~~~~l~~g~~d--------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~l~s~~~ 381 (391)
.... ..+.. ++|+|++|+.++.+ ..|++|| .++ ......+|...+.. +.|+ ++ ++++++.
T Consensus 213 l~~~-~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~---~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~ 281 (347)
T 2gop_A 213 MFEK-VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD--GKE---VMGILDEVDRGVGQAKIKD-GK--VYFTLFE 281 (347)
T ss_dssp EEEE-ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC--SSC---EEESSTTCCSEEEEEEEET-TE--EEEEEEE
T ss_pred eccC-cceee--ECCCCCEEEEEEccccCCccccceEEEEC--CCc---eEeccccCCcccCCccEEc-Cc--EEEEEec
Confidence 3333 33433 39999988877644 4688888 333 34445566778886 9998 44 8899999
Q ss_pred CCcEEEEec
Q psy2107 382 DNSVKLWDL 390 (391)
Q Consensus 382 dg~v~iwdl 390 (391)
++.++|| +
T Consensus 282 ~~~~~l~-~ 289 (347)
T 2gop_A 282 EGSVNLY-I 289 (347)
T ss_dssp TTEEEEE-E
T ss_pred CCcEEEE-E
Confidence 9999999 6
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.66 E-value=5e-13 Score=115.84 Aligned_cols=229 Identities=7% Similarity=0.032 Sum_probs=149.3
Q ss_pred CCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEecc-CCCCCeeEEEEEecCCCCeEEEEEeCC----CcEEEEe
Q psy2107 114 LHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIP-GHGGPVKGVAWLYNDGKDAAFISVSTD----QTAMIWE 186 (391)
Q Consensus 114 ~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~d----g~v~iwd 186 (391)
.+...+.+++|+ +++++++..++.|.+||..+.....+. .+...+.++++ ++++.++++...+ +.|.+||
T Consensus 42 ~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~---~~dg~l~v~~~~~~~~~~~i~~~d 118 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKI---HKDGRLFVCYLGDFKSTGGIFAAT 118 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEE---CTTSCEEEEECTTSSSCCEEEEEC
T ss_pred ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEE---CCCCcEEEEeCCCCCCCceEEEEe
Confidence 455677889997 567778888999999999655444433 56678999999 7788877777666 6899998
Q ss_pred ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC------CCcEEEEECCCCCCCCCCCCCCCCCccccccccccc
Q psy2107 187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW------DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYS 260 (391)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (391)
.. ......+.....+...+..++++|+++++++... .+.|..+|.++++
T Consensus 119 ~~--~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~----------------------- 173 (333)
T 2dg1_A 119 EN--GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT----------------------- 173 (333)
T ss_dssp TT--SCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC-----------------------
T ss_pred CC--CCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE-----------------------
Confidence 44 3332211111123457899999999987776653 2445555543211
Q ss_pred cCCCCCceeeecCccCcccEEEeccCCe-EEEE-ECCCeEEEEeccc-CceeEEE--------ECCeeeEEEEECCCCCE
Q psy2107 261 SASSRTPLITLKGHKEAISAVQWTAVDE-IITS-SWDHTLKIWDAEL-GGMKSEI--------VGNKSFFDVHYSPLSKL 329 (391)
Q Consensus 261 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~-~~dg~i~iwd~~~-~~~~~~~--------~~~~~i~~~~~~p~~~~ 329 (391)
...+..+...+..++|++++. ++.+ +.++.|.+||+.+ +.....+ ..+..+..++++++|++
T Consensus 174 -------~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l 246 (333)
T 2dg1_A 174 -------VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNL 246 (333)
T ss_dssp -------EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCE
T ss_pred -------EEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCE
Confidence 112222234467899997764 5444 5678999999964 3332211 12236778999999998
Q ss_pred EEEeeCCCcEEEEcCCCCCcceEEEEecccc------CcEEEEEECCCCCCEEEEeeC
Q psy2107 330 VITASADKQIRLYDPKVKEGAIVKSTFSSHK------EWVQSVRWSPIDPQLFVSASF 381 (391)
Q Consensus 330 l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~------~~v~~~~~~~~~~~~l~s~~~ 381 (391)
+++...++.|.+||.. ++ ....+..+. ..+.+++|+|+++.+++++..
T Consensus 247 ~v~~~~~~~v~~~d~~-g~---~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 247 YVAMYGQGRVLVFNKR-GY---PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEEETTTEEEEECTT-SC---EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EEEEcCCCEEEEECCC-CC---EEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 8887778999999974 33 333333332 268999999955455555544
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.65 E-value=9.9e-15 Score=138.78 Aligned_cols=258 Identities=10% Similarity=-0.007 Sum_probs=164.6
Q ss_pred cceEEEEEEeccCCCCCCcccCCCCcEE---------EEEec----CCE-EEEEEC-CCeEEEEcCC--C-ceEEeccC-
Q psy2107 93 ENVIDVEYLESTPTPSPLDCILHDDWVS---------AIDFH----NDW-ILTGCY-DHSVHIWTRR--G-EHKLNIPG- 153 (391)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~h~~~V~---------~~~~~----~~~-l~t~~~-dg~i~iwd~~--~-~~~~~~~~- 153 (391)
++...+|.... ......+..|...+. ...++ ++. |+.++. +..|.+|++. + .....+..
T Consensus 46 ~~~~~l~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~ 123 (662)
T 3azo_A 46 AGRATLVRRRA--DGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPV 123 (662)
T ss_dssp TTEEEEEEECT--TSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCC
T ss_pred CCcEEEEEECC--CCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCC
Confidence 44567776522 222344455555544 44333 666 665554 5678888877 4 55566665
Q ss_pred ----CCCCeeEEEEEecCCCCeEEEEEeCC----------CcEEEEeecCCC----CceeEEEEEe-cCCCCeEEEEEcC
Q psy2107 154 ----HGGPVKGVAWLYNDGKDAAFISVSTD----------QTAMIWEWKVES----NSIECIHVCR-GHERGLETVTVSE 214 (391)
Q Consensus 154 ----~~~~v~~l~~~~~~~~~~~l~s~~~d----------g~v~iwd~~~~~----~~~~~~~~~~-~~~~~v~~l~~~~ 214 (391)
|...+.+++| +++++.|++++.+ ..|++||+.... ... ..+. .+...+..++|+|
T Consensus 124 ~~~~~~~~~~~~~~---spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~Sp 197 (662)
T 3azo_A 124 SAVGGGLRWADPVL---LPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV---RELSDDAHRFVTGPRLSP 197 (662)
T ss_dssp CCSTTCEEEEEEEE---ETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS---EESSCSCSSEECCCEECT
T ss_pred ccCCCCccccCcEE---CCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce---eEEEecCCCcccCceECC
Confidence 6778899999 6688889888876 578888854210 222 2333 4556788899999
Q ss_pred CCCEEEEEeCCC--------cEEEEECC-CCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc
Q psy2107 215 SRQQFATGGWDC--------LLKIWSAD-ISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA 285 (391)
Q Consensus 215 ~~~~l~sg~~dg--------~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 285 (391)
+|++|+.++.++ .|.+||+. ++.. ........+|...+..+.|+|
T Consensus 198 DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~--------------------------~~~~~l~~~~~~~~~~~~~sp 251 (662)
T 3azo_A 198 DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRF--------------------------ADTRTLLGGPEEAIAQAEWAP 251 (662)
T ss_dssp TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCE--------------------------EEEEEEEEETTBCEEEEEECT
T ss_pred CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcc--------------------------cccEEeCCCCCceEcceEECC
Confidence 999999887553 79999997 3310 012223334567889999997
Q ss_pred CCe-EEEEECCC--eEEEEecccCceeEEEECCee---------eEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEE
Q psy2107 286 VDE-IITSSWDH--TLKIWDAELGGMKSEIVGNKS---------FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVK 353 (391)
Q Consensus 286 ~~~-l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~---------i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 353 (391)
++. ++++..++ .|.+||+.+++.......+.. +..++|+|+++++++++. +.++||.+....+ ..
T Consensus 252 dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~--~~ 328 (662)
T 3azo_A 252 DGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESG--EL 328 (662)
T ss_dssp TSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTT--EE
T ss_pred CCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCC--cE
Confidence 665 55566677 677777766665433333222 457889999999999988 9999994432211 24
Q ss_pred EEeccccCcEEEE-EECCCCCCEEEEeeCCCcEEEE
Q psy2107 354 STFSSHKEWVQSV-RWSPIDPQLFVSASFDNSVKLW 388 (391)
Q Consensus 354 ~~~~~h~~~v~~~-~~~~~~~~~l~s~~~dg~v~iw 388 (391)
..+..|...+..+ ++++ +..++++++.+....+|
T Consensus 329 ~~l~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 329 VDAAGPWTEWAATLTVSG-TRAVGVAASPRTAYEVV 363 (662)
T ss_dssp EECCSSCCEEEEEEEEET-TEEEEEEEETTEEEEEE
T ss_pred EEecCCCCeEEEEEecCC-CEEEEEEcCCCCCCEEE
Confidence 5667777778877 5544 33345555656544444
No 176
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.64 E-value=4.2e-14 Score=125.35 Aligned_cols=210 Identities=10% Similarity=0.045 Sum_probs=141.3
Q ss_pred cC-CCceEEeccCCCCCeeE-----EEEEecCCCCeEEEEEeC-CCc--EEEEeecCCCCceeEEEEEecCCCCeEEEEE
Q psy2107 142 TR-RGEHKLNIPGHGGPVKG-----VAWLYNDGKDAAFISVST-DQT--AMIWEWKVESNSIECIHVCRGHERGLETVTV 212 (391)
Q Consensus 142 d~-~~~~~~~~~~~~~~v~~-----l~~~~~~~~~~~l~s~~~-dg~--v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 212 (391)
+. ++.....+..|...... .+| +|+++.|+.++. +|. |.+|| ..+. .......++...+..++|
T Consensus 16 ~~~~g~~~~~lt~~~~~~~~~~~~~~~~---SpDg~~l~~~~~~~g~~~l~~~d--~~~g--~~~~lt~~~~~~~~~~~~ 88 (388)
T 3pe7_A 16 DASTGAQVTRLTPPDVTCHRNYFYQKCF---TRDGSKLLFGGAFDGPWNYYLLD--LNTQ--VATQLTEGRGDNTFGGFL 88 (388)
T ss_dssp CTTTCCEEEECSCTTSCEECCCTTSCCB---CTTSCEEEEEECTTSSCEEEEEE--TTTC--EEEECCCSSCBCSSSCEE
T ss_pred cCCCCcceEEecCCcccccchhhcCccC---CCCCCEEEEEEcCCCCceEEEEe--CCCC--ceEEeeeCCCCCccceEE
Confidence 44 66777788777766665 788 788998888887 775 55555 3333 344444555555557789
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEe--ccCCeEE
Q psy2107 213 SESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQW--TAVDEII 290 (391)
Q Consensus 213 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~l~ 290 (391)
+|+++.|+.++.++.|++||+.+++. ......+...+....| ++++.++
T Consensus 89 spdg~~l~~~~~~~~l~~~d~~~g~~-----------------------------~~~~~~~~~~~~~~~~~~~~dg~~l 139 (388)
T 3pe7_A 89 SPDDDALFYVKDGRNLMRVDLATLEE-----------------------------NVVYQVPAEWVGYGTWVANSDCTKL 139 (388)
T ss_dssp CTTSSEEEEEETTTEEEEEETTTCCE-----------------------------EEEEECCTTEEEEEEEEECTTSSEE
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcc-----------------------------eeeeechhhcccccceeECCCCCee
Confidence 99999999999999999999987442 2223333443433333 5555544
Q ss_pred EE-----------------------ECCCeEEEEecccCceeEEEECCeeeEEEEECC-CCCEEEEeeCC------CcEE
Q psy2107 291 TS-----------------------SWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSP-LSKLVITASAD------KQIR 340 (391)
Q Consensus 291 s~-----------------------~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p-~~~~l~~g~~d------g~i~ 340 (391)
.+ ..+..|.+||+.+++..........+..++|+| +|+.|+....+ ..|.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~ 219 (388)
T 3pe7_A 140 VGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMW 219 (388)
T ss_dssp EEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEE
T ss_pred ccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEE
Confidence 32 234789999999988766666666788999999 99988877653 3788
Q ss_pred EEcCCCCCcceEEEEecccc--CcEEEEEECCCCCCEEEEeeCCC----cEEEEecC
Q psy2107 341 LYDPKVKEGAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDN----SVKLWDLR 391 (391)
Q Consensus 341 iwd~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~l~s~~~dg----~v~iwdlr 391 (391)
++|+.... . ..+..+. ..+...+|+|++..+++.+..++ .|++||+.
T Consensus 220 ~~d~~~~~---~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 272 (388)
T 3pe7_A 220 LINEDGTN---M-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPE 272 (388)
T ss_dssp EEETTSCC---C-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTT
T ss_pred EEeCCCCc---e-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecC
Confidence 88876543 2 2333343 35888999996655544443332 39999873
No 177
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.62 E-value=4e-13 Score=116.07 Aligned_cols=231 Identities=10% Similarity=0.008 Sum_probs=157.2
Q ss_pred CcEEEEEecCC-EEEEEECCCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCce
Q psy2107 117 DWVSAIDFHND-WILTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSI 194 (391)
Q Consensus 117 ~~V~~~~~~~~-~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 194 (391)
.....+.+.++ ++++...++.|.+||.. ++.+.++. .......+++.+ ++..+++...++.|.+||.. + .
T Consensus 44 ~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~---~g~lyv~~~~~~~v~~iD~~--t--~ 115 (328)
T 3dsm_A 44 DVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLS---DEKAYVTQIWDYRIFIINPK--T--Y 115 (328)
T ss_dssp SCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEE---TTEEEEEEBSCSEEEEEETT--T--T
T ss_pred ccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeC---CCeEEEEECCCCeEEEEECC--C--C
Confidence 34567777765 45555567999999994 55556664 456788899844 56555555589999999954 2 3
Q ss_pred eEEEEEecCC-----CCeEEEEEcCCCCEEEEEe--CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCc
Q psy2107 195 ECIHVCRGHE-----RGLETVTVSESRQQFATGG--WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTP 267 (391)
Q Consensus 195 ~~~~~~~~~~-----~~v~~l~~~~~~~~l~sg~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (391)
+....+.... .....+++ .++ .++++. .++.|.++|..+++.
T Consensus 116 ~~~~~i~~g~~~~~~~~p~~i~~-~~~-~lyv~~~~~~~~v~viD~~t~~~----------------------------- 164 (328)
T 3dsm_A 116 EITGYIECPDMDMESGSTEQMVQ-YGK-YVYVNCWSYQNRILKIDTETDKV----------------------------- 164 (328)
T ss_dssp EEEEEEECTTCCTTTCBCCCEEE-ETT-EEEEEECTTCCEEEEEETTTTEE-----------------------------
T ss_pred eEEEEEEcCCccccCCCcceEEE-ECC-EEEEEcCCCCCEEEEEECCCCeE-----------------------------
Confidence 3444444322 14556777 344 454444 488999999977432
Q ss_pred eeeecCccCcccEEEeccCCeEEEEECC-----------CeEEEEecccCceeEEEECC--eeeEEEEECCCCCEEEEee
Q psy2107 268 LITLKGHKEAISAVQWTAVDEIITSSWD-----------HTLKIWDAELGGMKSEIVGN--KSFFDVHYSPLSKLVITAS 334 (391)
Q Consensus 268 ~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~~~--~~i~~~~~~p~~~~l~~g~ 334 (391)
...+.. ......+.+++++.++.++.. +.|.++|..+++....+... .....++++|+++.|.++.
T Consensus 165 ~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 165 VDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp EEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES
T ss_pred EEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc
Confidence 233332 223467888887876666543 68999999999888777653 3688999999999888775
Q ss_pred CCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEe----eCCCcEEEEec
Q psy2107 335 ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSA----SFDNSVKLWDL 390 (391)
Q Consensus 335 ~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~----~~dg~v~iwdl 390 (391)
. .|.+||+.+++... ...+..+......++++|+++.++++. ..++.|.+||.
T Consensus 244 ~--~v~~~d~~t~~~~~-~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 244 N--DIWRMPVEADRVPV-RPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp S--SEEEEETTCSSCCS-SCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred c--EEEEEECCCCceee-eeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECC
Confidence 4 89999987655210 011122245789999999788888887 67899999986
No 178
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.62 E-value=2.6e-14 Score=125.17 Aligned_cols=241 Identities=10% Similarity=0.026 Sum_probs=145.7
Q ss_pred CCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC----------CCcEEEEeecCCCCceeEEEEEec
Q psy2107 134 YDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST----------DQTAMIWEWKVESNSIECIHVCRG 202 (391)
Q Consensus 134 ~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~----------dg~v~iwd~~~~~~~~~~~~~~~~ 202 (391)
.|+.|.+||. +++.+..+..+..+ .++| ++++++++++.. ++.|.+||.. ..+.+..+..
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~---spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~----t~~~~~~i~~ 99 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQV---SNDGKKIYTMTTYHERITRGKRSDVVEVWDAD----KLTFEKEISL 99 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEE---CTTSSEEEEEEEEETTSSSSCEEEEEEEEETT----TCCEEEEEEE
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEE---CCCCCEEEEEEecccccccCCCCCEEEEEECc----CCcEEEEEEc
Confidence 4789999998 55666666665555 8899 788998888763 6789999953 3344444432
Q ss_pred ------CCCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCCCCC-CCCCCC------CC-----c-ccccccccccc
Q psy2107 203 ------HERGLETVTVSESRQQFATGGW--DCLLKIWSADISKERGD-PSENGD------EG-----T-TSKKRKKEYSS 261 (391)
Q Consensus 203 ------~~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~-~~~~~~------~~-----~-~~~~~~~~~~~ 261 (391)
+......++++|+|++|+++.. ++.|.+||+.+.+.... ...... +. . ........+..
T Consensus 100 ~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~ 179 (361)
T 2oiz_A 100 PPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTIN 179 (361)
T ss_dssp CTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEE
T ss_pred CccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEE
Confidence 2245678999999999998864 58999999988765432 111000 00 0 00000000000
Q ss_pred C-CCCCce------eeecCccCcccEEEecc-CCeEEEEECCCeEEEEecccCcee--EEEECC-----------eeeEE
Q psy2107 262 A-SSRTPL------ITLKGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMK--SEIVGN-----------KSFFD 320 (391)
Q Consensus 262 ~-~~~~~~------~~~~~~~~~v~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~-----------~~i~~ 320 (391)
. ...+.. ..+..+..++ .+.+.+ +..++..+.++.+.++|+...... ..+... .....
T Consensus 180 ~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~ 258 (361)
T 2oiz_A 180 LGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNL 258 (361)
T ss_dssp ECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSC
T ss_pred ECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeE
Confidence 0 001111 0111111111 111122 235666678899999998755422 222211 11123
Q ss_pred EEECCCCCEEEEeeC-----------CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107 321 VHYSPLSKLVITASA-----------DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 321 ~~~~p~~~~l~~g~~-----------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 389 (391)
++++|+++.++++.. .+.|.+||+.+.+ .+..+..+. +.+++|+|++ ++|++++. +.|.+||
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~---~v~~i~~~~--p~~ia~spdg-~~l~v~n~-~~v~v~D 331 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ---RVARIPGRD--ALSMTIDQQR-NLMLTLDG-GNVNVYD 331 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE---EEEEEECTT--CCEEEEETTT-TEEEEECS-SCEEEEE
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc---EEEEEecCC--eeEEEECCCC-CEEEEeCC-CeEEEEE
Confidence 789999887776543 3489999998766 777777776 9999999954 56777766 9999999
Q ss_pred cC
Q psy2107 390 LR 391 (391)
Q Consensus 390 lr 391 (391)
++
T Consensus 332 ~~ 333 (361)
T 2oiz_A 332 IS 333 (361)
T ss_dssp CS
T ss_pred CC
Confidence 73
No 179
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.61 E-value=3.8e-14 Score=135.27 Aligned_cols=239 Identities=8% Similarity=-0.087 Sum_probs=155.9
Q ss_pred CCCCcEEEEEec--CCEEE-----EEECCCeEEEEcCCCceEEeccCCCCCe--eEEEEEecCCCCeEEEEEeCCCc---
Q psy2107 114 LHDDWVSAIDFH--NDWIL-----TGCYDHSVHIWTRRGEHKLNIPGHGGPV--KGVAWLYNDGKDAAFISVSTDQT--- 181 (391)
Q Consensus 114 ~h~~~V~~~~~~--~~~l~-----t~~~dg~i~iwd~~~~~~~~~~~~~~~v--~~l~~~~~~~~~~~l~s~~~dg~--- 181 (391)
+|...+.+++|+ |++|| .|+.+..|++||+.+..... ..+...+ ..++| +++++.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~w---spDg~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-VDVIEGGKYATPKW---TPDSKGFYYEWLPTDPSI 193 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-SCCBSCCTTCCCEE---CTTSSEEEEEECCCCTTS
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-CcccCcccccceEE---ecCCCEEEEEEecCCCCC
Confidence 466678899998 56777 33344689999996544331 1122222 68999 788999999988776
Q ss_pred ----------EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC----cEEEEECCCCCCCCCCCCCCC
Q psy2107 182 ----------AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC----LLKIWSADISKERGDPSENGD 247 (391)
Q Consensus 182 ----------v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg----~i~iwd~~~~~~~~~~~~~~~ 247 (391)
|++|++.........+.....|...+..+.|+|+|++|+.++.++ .|.+|+..++
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~----------- 262 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK----------- 262 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS-----------
T ss_pred ccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC-----------
Confidence 999996533322334444445666889999999999998877665 5666654321
Q ss_pred CCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEEC----CCeEEEEecccCce---eEEEECC--eee
Q psy2107 248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSW----DHTLKIWDAELGGM---KSEIVGN--KSF 318 (391)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~~---~~~~~~~--~~i 318 (391)
....+..+...+....+++++ ++..+. ++.|.+||+.++.. ...+..+ ..+
T Consensus 263 -------------------~~~~l~~~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l 322 (695)
T 2bkl_A 263 -------------------DFRLLVKGVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASL 322 (695)
T ss_dssp -------------------SCEEEEECSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEE
T ss_pred -------------------ceEEeecCCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeE
Confidence 233344455555666666555 555543 58899999987753 3333332 357
Q ss_pred EEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc-cCcEEEEEECCCCCCEEEEee---CCCcEEEEec
Q psy2107 319 FDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH-KEWVQSVRWSPIDPQLFVSAS---FDNSVKLWDL 390 (391)
Q Consensus 319 ~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~---~dg~v~iwdl 390 (391)
..++++ ++.++++...|+..+||.+... +. ....+..+ .+.|..++++|++..++++.+ ..++|++||+
T Consensus 323 ~~~~~~-~~~lv~~~~~dg~~~l~~~~~~-g~-~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~ 395 (695)
T 2bkl_A 323 LSVSIV-GGHLSLEYLKDATSEVRVATLK-GK-PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSV 395 (695)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEEETT-CC-EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEET
T ss_pred EEEEEE-CCEEEEEEEECCEEEEEEEeCC-CC-eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 778888 6778888888998888765421 11 33444444 667888999995555544443 3468999986
No 180
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.59 E-value=7.1e-13 Score=113.81 Aligned_cols=232 Identities=13% Similarity=0.161 Sum_probs=149.4
Q ss_pred cEEEEEec--CCEEEE-------EECCCeEEEEcCCCceEEeccC-----CCCCeeEEEEEecCCC-CeEEEEEeCCCcE
Q psy2107 118 WVSAIDFH--NDWILT-------GCYDHSVHIWTRRGEHKLNIPG-----HGGPVKGVAWLYNDGK-DAAFISVSTDQTA 182 (391)
Q Consensus 118 ~V~~~~~~--~~~l~t-------~~~dg~i~iwd~~~~~~~~~~~-----~~~~v~~l~~~~~~~~-~~~l~s~~~dg~v 182 (391)
...+++|+ +.++++ +..++.|.+||........+.. +...+.++++ +++ +.++++.. .+.|
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~---~~~~g~l~v~~~-~~~l 94 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQC---DRDANQLFVADM-RLGL 94 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEE---CSSSSEEEEEET-TTEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEE---ecCCCcEEEEEC-CCCE
Confidence 45678886 556666 5778999999975444443322 4567889998 667 66555444 4478
Q ss_pred EEEeecCCCCceeEE-EEEe--cCCCCeEEEEEcCCCCEEEEEeCC---------------CcEEEEECCCCCCCCCCCC
Q psy2107 183 MIWEWKVESNSIECI-HVCR--GHERGLETVTVSESRQQFATGGWD---------------CLLKIWSADISKERGDPSE 244 (391)
Q Consensus 183 ~iwd~~~~~~~~~~~-~~~~--~~~~~v~~l~~~~~~~~l~sg~~d---------------g~i~iwd~~~~~~~~~~~~ 244 (391)
.+||.. .....+ .... .....+.+++++++++++++...+ +.|..|+.. ++
T Consensus 95 ~~~d~~---g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~------- 163 (314)
T 1pjx_A 95 LVVQTD---GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ------- 163 (314)
T ss_dssp EEEETT---SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC-------
T ss_pred EEEeCC---CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC-------
Confidence 888843 222111 1000 112358899999999877776554 455555543 11
Q ss_pred CCCCCccccccccccccCCCCCceeeecCccCcccEEEec----cCC-eEEEE-ECCCeEEEEecc-cCce-----eEEE
Q psy2107 245 NGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT----AVD-EIITS-SWDHTLKIWDAE-LGGM-----KSEI 312 (391)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~-~l~s~-~~dg~i~iwd~~-~~~~-----~~~~ 312 (391)
...+..+......++++ +++ .++.+ ..++.|.+||+. +++. ...+
T Consensus 164 -----------------------~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~ 220 (314)
T 1pjx_A 164 -----------------------MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHI 220 (314)
T ss_dssp -----------------------EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEEC
T ss_pred -----------------------EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEEC
Confidence 11122223345678888 877 45555 467899999986 4432 1222
Q ss_pred ECC--eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 313 VGN--KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 313 ~~~--~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
..+ ..+..++++++|+++++...++.|.+||..+++ ....+..+...+.+++|+|++..++++...++.|..|++
T Consensus 221 ~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~---~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 221 PGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ---PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp CCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS---CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCc---EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 222 457789999999988887788999999987544 333444566789999999954436667777789999886
No 181
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.59 E-value=4.9e-14 Score=135.52 Aligned_cols=195 Identities=9% Similarity=0.095 Sum_probs=132.4
Q ss_pred CCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCC-----eEEEEEcCCCCEEEEEeCC-----
Q psy2107 156 GPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERG-----LETVTVSESRQQFATGGWD----- 225 (391)
Q Consensus 156 ~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-----v~~l~~~~~~~~l~sg~~d----- 225 (391)
....+++| ++++.+++++ ||+|++||+. ++ .+...+.+|... ...++|+|||++|+.++.+
T Consensus 17 ~~~~~~~w---~~dg~~~~~~--~~~i~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r 87 (740)
T 4a5s_A 17 LKLYSLRW---ISDHEYLYKQ--ENNILVFNAE--YG--NSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWR 87 (740)
T ss_dssp CCCCCEEE---CSSSEEEEEE--TTEEEEEETT--TC--CEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSS
T ss_pred ccccccEE---CCCCcEEEEc--CCcEEEEECC--CC--ceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEE
Confidence 34668999 7788888886 9999999954 32 334456666532 2448899999999998876
Q ss_pred ----CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEE
Q psy2107 226 ----CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIW 301 (391)
Q Consensus 226 ----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iw 301 (391)
+.+.+||+.+++. ..+..|...+...+|+|++..++-..++.|++|
T Consensus 88 ~~~~~~~~~~d~~~~~~------------------------------~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~ 137 (740)
T 4a5s_A 88 HSYTASYDIYDLNKRQL------------------------------ITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVK 137 (740)
T ss_dssp SCEEEEEEEEETTTTEE------------------------------CCSSCCCTTEEEEEECSSTTCEEEEETTEEEEE
T ss_pred EccceEEEEEECCCCcE------------------------------EEcccCCCcceeeEECCCCCEEEEEECCeEEEE
Confidence 5667999987442 224456678899999988764444468999999
Q ss_pred ecccCceeEEEECCe--ee-----------------EEEEECCCCCEEEEeeCCC-------------------------
Q psy2107 302 DAELGGMKSEIVGNK--SF-----------------FDVHYSPLSKLVITASADK------------------------- 337 (391)
Q Consensus 302 d~~~~~~~~~~~~~~--~i-----------------~~~~~~p~~~~l~~g~~dg------------------------- 337 (391)
|+.++...+...... .+ ..+.|||||++||.++.|.
T Consensus 138 ~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~ 217 (740)
T 4a5s_A 138 IEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 217 (740)
T ss_dssp SSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEE
T ss_pred ECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeec
Confidence 998877543221111 11 2488999999999875332
Q ss_pred -----------cEEEEcCCC---CCcceEEEEec-----cccCcEEEEEECCCCCCEEEEeeC----CCcEEEEec
Q psy2107 338 -----------QIRLYDPKV---KEGAIVKSTFS-----SHKEWVQSVRWSPIDPQLFVSASF----DNSVKLWDL 390 (391)
Q Consensus 338 -----------~i~iwd~~~---~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~~l~s~~~----dg~v~iwdl 390 (391)
.|++||+.+ ++......... +|...+..++|+|+ +++++.... +..|++||+
T Consensus 218 yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspd-g~~~~~~~~r~~~~~~i~~~d~ 292 (740)
T 4a5s_A 218 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQ-ERISLQWLRRIQNYSVMDICDY 292 (740)
T ss_dssp CCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEET-TEEEEEEEESSTTEEEEEEEEE
T ss_pred CCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCC-CeEEEEEeCCCCCEEEEEEEEC
Confidence 478888876 52111222211 37788999999995 555554432 346999985
No 182
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.58 E-value=4e-12 Score=107.62 Aligned_cols=193 Identities=16% Similarity=0.200 Sum_probs=138.0
Q ss_pred CCCCcEEEEEe-c-CCEEEEEE-C-CCeEEEEcCCCceEEecc-CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeec
Q psy2107 114 LHDDWVSAIDF-H-NDWILTGC-Y-DHSVHIWTRRGEHKLNIP-GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWK 188 (391)
Q Consensus 114 ~h~~~V~~~~~-~-~~~l~t~~-~-dg~i~iwd~~~~~~~~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~ 188 (391)
+|...+.++++ . ...++.+. . ++.|++||.++..+..+. .+...+.++++ ++++.++++...++.|.+|+..
T Consensus 74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~---~~~g~l~v~~~~~~~i~~~~~~ 150 (286)
T 1q7f_A 74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTV---DNKGRIIVVECKVMRVIIFDQN 150 (286)
T ss_dssp TCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCSCEEEEEE---CTTSCEEEEETTTTEEEEECTT
T ss_pred ccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCCCceEEEE---eCCCCEEEEECCCCEEEEEcCC
Confidence 35567889999 3 33444444 3 899999998777766554 34467889999 7788888888888999999832
Q ss_pred CCCCceeEEEEEe--cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107 189 VESNSIECIHVCR--GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT 266 (391)
Q Consensus 189 ~~~~~~~~~~~~~--~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (391)
. ..+..+. .+...+..++++++++++++...++.|++||... .
T Consensus 151 --g---~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g------------------------------~ 195 (286)
T 1q7f_A 151 --G---NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG------------------------------Q 195 (286)
T ss_dssp --S---CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC------------------------------C
T ss_pred --C---CEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC------------------------------C
Confidence 2 2333443 3456789999999999888878889999999743 1
Q ss_pred ceeeecC--ccCcccEEEeccCCeEEEEE-CCC-eEEEEecccCceeEEEECCe---eeEEEEECCCCCEEEEeeCCCcE
Q psy2107 267 PLITLKG--HKEAISAVQWTAVDEIITSS-WDH-TLKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVITASADKQI 339 (391)
Q Consensus 267 ~~~~~~~--~~~~v~~~~~~~~~~l~s~~-~dg-~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~~g~~dg~i 339 (391)
.+..+.. +...+..+++++++.++.+. .++ .|.+||. +++.+..+..+. .+.+++++|+|+++++ +.++.|
T Consensus 196 ~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v 273 (286)
T 1q7f_A 196 YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRL 273 (286)
T ss_dssp EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEE
T ss_pred EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeE
Confidence 2223322 23567889999777655554 454 9999995 566666665433 3678999999987777 579999
Q ss_pred EEEcCCC
Q psy2107 340 RLYDPKV 346 (391)
Q Consensus 340 ~iwd~~~ 346 (391)
++|++..
T Consensus 274 ~v~~~~~ 280 (286)
T 1q7f_A 274 YIYRYVQ 280 (286)
T ss_dssp EEEECSC
T ss_pred EEEEccc
Confidence 9999754
No 183
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.58 E-value=2.7e-11 Score=103.02 Aligned_cols=234 Identities=9% Similarity=-0.022 Sum_probs=160.7
Q ss_pred CCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEec--cCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC
Q psy2107 115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNI--PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE 190 (391)
Q Consensus 115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~--~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 190 (391)
+...+.+++++ +.++++...++.|.+||..+ ....+ ..+...+.++++ ++++.++++...++.|..|+..
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~-~~~~~~~~~~~~~~~~i~~---~~~g~l~v~~~~~~~i~~~~~~-- 86 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLDG-KITEYPLPTPDAKVMCLTI---SSDGEVWFTENAANKIGRITKK-- 86 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEECSSTTCCEEEEEE---CTTSCEEEEETTTTEEEEECTT--
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCCC-CeEEecCCcccCceeeEEE---CCCCCEEEeCCCCCeEEEECCC--
Confidence 44578899987 55666555578999999873 33332 335577889999 7788888877778889999843
Q ss_pred CCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee
Q psy2107 191 SNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT 270 (391)
Q Consensus 191 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (391)
.... ...+......+.++++.++++++++...++.|..||. +++. ....
T Consensus 87 -g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~----------------------------~~~~ 135 (299)
T 2z2n_A 87 -GIIK-EYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKI----------------------------REYE 135 (299)
T ss_dssp -SCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE----------------------------EEEE
T ss_pred -CcEE-EEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCE----------------------------EEec
Confidence 2221 1222234567899999999988887777889999987 3221 1111
Q ss_pred ecCccCcccEEEeccCCeEEEEE-CCCeEEEEecccCceeEEE-E-CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC
Q psy2107 271 LKGHKEAISAVQWTAVDEIITSS-WDHTLKIWDAELGGMKSEI-V-GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK 347 (391)
Q Consensus 271 ~~~~~~~v~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~-~-~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~ 347 (391)
...+...+..+++.+++.++.+. .++.|..||. +++..... . ....+..++++++|++.++...++.|.+||. ++
T Consensus 136 ~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g 213 (299)
T 2z2n_A 136 LPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SG 213 (299)
T ss_dssp CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred CCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CC
Confidence 22234567889999777766655 4689999998 66654321 1 1236788999999997777767889999998 44
Q ss_pred CcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 348 EGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 348 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
. ........+...+.++++++ ++.++++...++.|.+||.
T Consensus 214 ~--~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 214 E--ITEFKIPTPNARPHAITAGA-GIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp C--EEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEEET
T ss_pred c--EEEEECCCCCCCceeEEECC-CCCEEEeccCCceEEEECC
Confidence 3 12222344556799999999 5566776657788998874
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.57 E-value=3.8e-14 Score=125.90 Aligned_cols=225 Identities=10% Similarity=0.011 Sum_probs=137.8
Q ss_pred EEec--CCEEEEEECCCeEEEEcCCCceEEec-cCCCCCeeE-------------------EEEEecCCCCeEEEEE---
Q psy2107 122 IDFH--NDWILTGCYDHSVHIWTRRGEHKLNI-PGHGGPVKG-------------------VAWLYNDGKDAAFISV--- 176 (391)
Q Consensus 122 ~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~-~~~~~~v~~-------------------l~~~~~~~~~~~l~s~--- 176 (391)
+.|+ ++.|+.++.++.|++||+.+.....+ ..+...... +.| +++++.++.+
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~---spdg~~~~~~~~~ 162 (396)
T 3c5m_A 86 GFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDW---QPLTSWEKFAEFY 162 (396)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGC---CCCCSHHHHHHHH
T ss_pred ceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCcccccccccccc---CCCCcceeeeeec
Confidence 4565 77999999999999999965443333 223332111 122 3444444333
Q ss_pred --eCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCC------CcEEEEECCCCCCCCCCCCCCC
Q psy2107 177 --STDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE-SRQQFATGGWD------CLLKIWSADISKERGDPSENGD 247 (391)
Q Consensus 177 --~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~d------g~i~iwd~~~~~~~~~~~~~~~ 247 (391)
..+..|.+||+. ......+ ..+...+..+.|+| +++.|+..+.+ ..|.+||+..+..
T Consensus 163 ~~~~~~~l~~~d~~--~g~~~~~---~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~--------- 228 (396)
T 3c5m_A 163 HTNPTCRLIKVDIE--TGELEVI---HQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV--------- 228 (396)
T ss_dssp HTCCCEEEEEEETT--TCCEEEE---EEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC---------
T ss_pred cCCCcceEEEEECC--CCcEEee---ccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce---------
Confidence 345678888854 3332222 24567889999999 78877766543 3578888754221
Q ss_pred CCccccccccccccCCCCCceeeecCc--cCcccEEEeccCCe-EEEEECC-----CeEEEEecccCceeEEEECCeeeE
Q psy2107 248 EGTTSKKRKKEYSSASSRTPLITLKGH--KEAISAVQWTAVDE-IITSSWD-----HTLKIWDAELGGMKSEIVGNKSFF 319 (391)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~-l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~i~ 319 (391)
..+..+ ...+..+.|+|++. |+.++.+ +.|++||+.+++......... ..
T Consensus 229 ---------------------~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~ 286 (396)
T 3c5m_A 229 ---------------------RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS 286 (396)
T ss_dssp ---------------------EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE
T ss_pred ---------------------eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC
Confidence 112222 23467889997665 6666544 459999999887654433332 23
Q ss_pred EEEECC-CCCEEEEee----------------CCCcEEEEcCCCCCcceEEEEeccccC-----------cEEEEEECCC
Q psy2107 320 DVHYSP-LSKLVITAS----------------ADKQIRLYDPKVKEGAIVKSTFSSHKE-----------WVQSVRWSPI 371 (391)
Q Consensus 320 ~~~~~p-~~~~l~~g~----------------~dg~i~iwd~~~~~~~~~~~~~~~h~~-----------~v~~~~~~~~ 371 (391)
+.|+| +|+++++++ .++.|++||+..+... .+..+.. .+..++|+|+
T Consensus 287 -~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~s~d 361 (396)
T 3c5m_A 287 -HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ----KLCKHSTSWDVLDGDRQITHPHPSFTPN 361 (396)
T ss_dssp -EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC----EEEECCCCCCCBTTBSSTTCCCCEECTT
T ss_pred -CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE----EccCCCCccccccccccCCCCCceEccC
Confidence 88999 999888754 3478999998765522 2333433 2567889995
Q ss_pred CCCEEEEeeCCCcEEEEec
Q psy2107 372 DPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 372 ~~~~l~s~~~dg~v~iwdl 390 (391)
+..+++++..++...||.+
T Consensus 362 g~~l~~~s~~~~~~~l~~~ 380 (396)
T 3c5m_A 362 DDGVLFTSDFEGVPAIYIA 380 (396)
T ss_dssp SSEEEEEECTTSSCEEEEE
T ss_pred CCeEEEEecCCCCceEEEE
Confidence 5544444445677666643
No 185
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.57 E-value=9.9e-14 Score=120.57 Aligned_cols=177 Identities=9% Similarity=0.032 Sum_probs=127.4
Q ss_pred CeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC-------CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy2107 157 PVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES-------NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLK 229 (391)
Q Consensus 157 ~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~ 229 (391)
++..+++ ++...++++|+.++ +.+|++.... ...+..... .+.. |+.++| ++++|+++ .++.|+
T Consensus 39 ~~nlLai---s~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~ 109 (388)
T 1xip_A 39 SLQNLDI---SNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALY 109 (388)
T ss_dssp CCBCEEE---ETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEE
T ss_pred cccEEEE---cCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEE
Confidence 6888999 56677899998875 5669854211 012221222 3556 999999 88999998 889999
Q ss_pred EEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCcee
Q psy2107 230 IWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMK 309 (391)
Q Consensus 230 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 309 (391)
+||+++.. .......|...+.++.+.+.+ +++++.||.|.+||+.++...
T Consensus 110 v~dv~sl~-----------------------------~~~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~ 159 (388)
T 1xip_A 110 SLDLEELS-----------------------------EFRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTKSTK 159 (388)
T ss_dssp EEESSSTT-----------------------------CEEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTCCEE
T ss_pred EEEchhhh-----------------------------ccCccceeecceeeEEecCCC-EEEEECCCCEEEEEccCCccc
Confidence 99997622 233445566778888777443 888999999999999988765
Q ss_pred EEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEe------c---cccCcEEEEEECCCCCCEEEEe
Q psy2107 310 SEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTF------S---SHKEWVQSVRWSPIDPQLFVSA 379 (391)
Q Consensus 310 ~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~------~---~h~~~v~~~~~~~~~~~~l~s~ 379 (391)
. ....|.|++|+|+| ++.|..||.+++|+....... ....+ . +|...|.++.|.+ +..++++-
T Consensus 160 ~---~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~-~k~~I~~Pp~~~~~~~~~~~V~sI~wl~-~~~flv~y 231 (388)
T 1xip_A 160 Q---LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEME-KQFEFSLPSELEELPVEEYSPLSVTILS-PQDFLAVF 231 (388)
T ss_dssp E---EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEE-EEEEECCCHHHHTSCTTTSEEEEEEESS-SSEEEEEE
T ss_pred c---ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCcccc-ccceecCCcccccccCCCeeEEEEEEec-CCeEEEEE
Confidence 3 33589999999999 677889999999987654410 03334 2 4778999999999 55566653
No 186
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.57 E-value=7.2e-14 Score=124.07 Aligned_cols=229 Identities=10% Similarity=0.008 Sum_probs=142.8
Q ss_pred cEEEEEec--CCEEEEEECC---CeEEEEcCCCceEEeccCCCCCee-EEEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107 118 WVSAIDFH--NDWILTGCYD---HSVHIWTRRGEHKLNIPGHGGPVK-GVAWLYNDGKDAAFISVSTDQTAMIWEWKVES 191 (391)
Q Consensus 118 ~V~~~~~~--~~~l~t~~~d---g~i~iwd~~~~~~~~~~~~~~~v~-~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 191 (391)
.+.+++|+ |++|+..... ..|.+||+.+.....+..+..... .+.| +++++.|+.++.++.|.+|++. .
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~---spdg~~l~~~~~~~~l~~~d~~--~ 111 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFI---STDERAFFYVKNELNLMKVDLE--T 111 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEE---CTTSSEEEEEETTTEEEEEETT--T
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceE---CCCCCEEEEEEcCCcEEEEECC--C
Confidence 35566776 6677766543 478888997766666655444433 4788 7889999999999999999954 3
Q ss_pred CceeEEEEEecCCCCeEE-------------------EEEcCCCCEEEEE-----eCCCcEEEEECCCCCCCCCCCCCCC
Q psy2107 192 NSIECIHVCRGHERGLET-------------------VTVSESRQQFATG-----GWDCLLKIWSADISKERGDPSENGD 247 (391)
Q Consensus 192 ~~~~~~~~~~~~~~~v~~-------------------l~~~~~~~~l~sg-----~~dg~i~iwd~~~~~~~~~~~~~~~ 247 (391)
.... .....+...... +.|+|+++.++.+ ..+..|.+||+.+++
T Consensus 112 ~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~---------- 179 (396)
T 3c5m_A 112 LEEQ--VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE---------- 179 (396)
T ss_dssp CCEE--EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC----------
T ss_pred CCcE--EEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc----------
Confidence 3322 223323332222 2456666655443 345677888876532
Q ss_pred CCccccccccccccCCCCCceeeecCccCcccEEEecc-CCe-EEEEECC------CeEEEEecccCceeEEEEC--Cee
Q psy2107 248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDE-IITSSWD------HTLKIWDAELGGMKSEIVG--NKS 317 (391)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~-l~s~~~d------g~i~iwd~~~~~~~~~~~~--~~~ 317 (391)
...+..+...+..+.|+| ++. ++..+.+ ..|.+||+..++....... ...
T Consensus 180 --------------------~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~ 239 (396)
T 3c5m_A 180 --------------------LEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGES 239 (396)
T ss_dssp --------------------EEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEE
T ss_pred --------------------EEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCcc
Confidence 122224566788899998 454 6655543 4688889876553322222 236
Q ss_pred eEEEEECCCCCEEEEeeCC-----CcEEEEcCCCCCcceEEEEeccccCcEEEEEECC-CCCCEEEEee-----------
Q psy2107 318 FFDVHYSPLSKLVITASAD-----KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP-IDPQLFVSAS----------- 380 (391)
Q Consensus 318 i~~~~~~p~~~~l~~g~~d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~~----------- 380 (391)
+..++|+|+|++|+.++.+ +.|++||+.+++.. .+....+ .. +.|+| ++. ++++++
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~----~~-~~~s~~dg~-~l~~~~~~~p~~~~~~~ 312 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENE-EVMVMPP----CS-HLMSNFDGS-LMVGDGCDAPVDVADAD 312 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEE-EEEECCS----EE-EEEECSSSS-EEEEEECCC--------
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeE-EeeeCCC----CC-CCccCCCCc-eEEEecCCcceeecccc
Confidence 7889999999987776543 44999999876522 1222222 33 88998 665 566544
Q ss_pred -----CCCcEEEEec
Q psy2107 381 -----FDNSVKLWDL 390 (391)
Q Consensus 381 -----~dg~v~iwdl 390 (391)
.++.|++||+
T Consensus 313 ~~~~~~~~~i~~~d~ 327 (396)
T 3c5m_A 313 SYNIENDPFLYVLNT 327 (396)
T ss_dssp --CCCCCCEEEEEET
T ss_pred ccccCCCCcEEEEec
Confidence 3478999986
No 187
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.55 E-value=9.2e-12 Score=108.93 Aligned_cols=239 Identities=13% Similarity=0.036 Sum_probs=150.1
Q ss_pred EEEec--CCEEEEEE----------CCCeEEEEcCC-CceEEeccC------CCCCeeEEEEEecCCCCeEEEEEeC--C
Q psy2107 121 AIDFH--NDWILTGC----------YDHSVHIWTRR-GEHKLNIPG------HGGPVKGVAWLYNDGKDAAFISVST--D 179 (391)
Q Consensus 121 ~~~~~--~~~l~t~~----------~dg~i~iwd~~-~~~~~~~~~------~~~~v~~l~~~~~~~~~~~l~s~~~--d 179 (391)
.++|+ +++++++. .++.|.+||.. .+.+..+.. +......+++ ++++++|+++.. +
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~---spdg~~l~v~n~~~~ 130 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQ---TTDGKFIVLQNASPA 130 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEE---CTTSSEEEEEEESSS
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEE---CCCCCEEEEECCCCC
Confidence 67887 66787776 36789999984 455554432 2345678999 888998888764 6
Q ss_pred CcEEEEeecCCCCceeEEEE-EecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCC-CCCC------CCCCCCCCCCc
Q psy2107 180 QTAMIWEWKVESNSIECIHV-CRGHERGLETVTVSESR-QQFATGGWDCLLKIWSADI-SKER------GDPSENGDEGT 250 (391)
Q Consensus 180 g~v~iwd~~~~~~~~~~~~~-~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~-~~~~------~~~~~~~~~~~ 250 (391)
++|.+||+. ..+.+.. +.. .....+.+.|++ ..+++.+.||.+.+|+... ++.. ...........
T Consensus 131 ~~v~v~d~~----~~~~~~~~i~~--~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~ 204 (361)
T 2oiz_A 131 TSIGIVDVA----KGDYVEDVTAA--AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIF 204 (361)
T ss_dssp EEEEEEETT----TTEEEEEEGGG--TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBC
T ss_pred CeEEEEECC----CCcEEEEEecC--CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceE
Confidence 899999954 2244544 332 222335667765 6778888999999998864 2221 00000000000
Q ss_pred --cccccccc----------cccCCCCC--ceeeecCc----------cCcccEEEeccC-CeEEEEEC-----------
Q psy2107 251 --TSKKRKKE----------YSSASSRT--PLITLKGH----------KEAISAVQWTAV-DEIITSSW----------- 294 (391)
Q Consensus 251 --~~~~~~~~----------~~~~~~~~--~~~~~~~~----------~~~v~~~~~~~~-~~l~s~~~----------- 294 (391)
........ ..+..... ....+... ......++++++ ++++++..
T Consensus 205 ~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~ 284 (361)
T 2oiz_A 205 IAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFP 284 (361)
T ss_dssp SCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCC
T ss_pred EEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCC
Confidence 00000000 00000000 00010000 011123678855 56665543
Q ss_pred CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC--CcceEEEEeccccCcEEEEEECCCC
Q psy2107 295 DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK--EGAIVKSTFSSHKEWVQSVRWSPID 372 (391)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~ 372 (391)
.+.|.+||+.+++.+.++..+. +..++|+|+|++|++++. +.|.+||..++ + .+..+..+......++++|++
T Consensus 285 ~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~---~~~~i~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 285 AAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPK---LLRTIEGAAEASLQVQFHPVG 359 (361)
T ss_dssp CSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCE---EEEEETTSCSSEEEEEECCCS
T ss_pred CceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcce---eeEEeccCCCCcEEEEecCCC
Confidence 3589999999999999999888 999999999999998886 99999999876 5 666766677788999999955
Q ss_pred C
Q psy2107 373 P 373 (391)
Q Consensus 373 ~ 373 (391)
+
T Consensus 360 ~ 360 (361)
T 2oiz_A 360 G 360 (361)
T ss_dssp C
T ss_pred C
Confidence 3
No 188
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.54 E-value=5.7e-12 Score=108.95 Aligned_cols=193 Identities=9% Similarity=0.022 Sum_probs=140.8
Q ss_pred CCCcEEEEEec--CCEEEEEECCCeEEEEcCCCc--eEEec---------cCCCCCeeEEEEEecCC-CCeEEEEEe-CC
Q psy2107 115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGE--HKLNI---------PGHGGPVKGVAWLYNDG-KDAAFISVS-TD 179 (391)
Q Consensus 115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~--~~~~~---------~~~~~~v~~l~~~~~~~-~~~~l~s~~-~d 179 (391)
+-.....++++ ++++++...++.|++|+.++. .+..+ ..+-.....+++ ++ ++.++++.+ .+
T Consensus 89 ~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~---~~~~g~lyv~d~~~~ 165 (329)
T 3fvz_A 89 LFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAV---EPSTGAVFVSDGYCN 165 (329)
T ss_dssp TCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEE---CTTTCCEEEEECSSC
T ss_pred ccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEE---eCCCCeEEEEeCCCC
Confidence 44567888987 678888888999999999765 44444 244457889999 66 677888876 69
Q ss_pred CcEEEEeecCCCCceeEEEEEec----------CCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC
Q psy2107 180 QTAMIWEWKVESNSIECIHVCRG----------HERGLETVTVSES-RQQFATGGWDCLLKIWSADISKERGDPSENGDE 248 (391)
Q Consensus 180 g~v~iwd~~~~~~~~~~~~~~~~----------~~~~v~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~ 248 (391)
+.|++|+. . ...+..+.. +......++++|+ +.++++...++.|++||.++++
T Consensus 166 ~~I~~~~~--~---g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~----------- 229 (329)
T 3fvz_A 166 SRIVQFSP--S---GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE----------- 229 (329)
T ss_dssp CEEEEECT--T---SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC-----------
T ss_pred CeEEEEcC--C---CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc-----------
Confidence 99999982 2 233344422 2234889999998 7777777788999999997533
Q ss_pred CccccccccccccCCCCCceeee--cCccCcccEEEeccCCeEEEE--------ECCCeEEEEecccCceeEEEE----C
Q psy2107 249 GTTSKKRKKEYSSASSRTPLITL--KGHKEAISAVQWTAVDEIITS--------SWDHTLKIWDAELGGMKSEIV----G 314 (391)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~l~s~--------~~dg~i~iwd~~~~~~~~~~~----~ 314 (391)
.+..+ ..+...+..++++| +.++.. ..+..|++||..+++.+..+. .
T Consensus 230 ------------------~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~ 290 (329)
T 3fvz_A 230 ------------------FVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKH 290 (329)
T ss_dssp ------------------EEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSC
T ss_pred ------------------EEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCc
Confidence 23333 23455677888888 443333 234589999999999988874 2
Q ss_pred CeeeEEEEECCCCCEEEEeeCCCcEEEEcCC
Q psy2107 315 NKSFFDVHYSPLSKLVITASADKQIRLYDPK 345 (391)
Q Consensus 315 ~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~ 345 (391)
...+..++++|+|.++++...++.|++|++.
T Consensus 291 ~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 291 FDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp CSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred cCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 2357899999999888888889999999964
No 189
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.53 E-value=7.6e-12 Score=108.03 Aligned_cols=212 Identities=8% Similarity=0.068 Sum_probs=145.6
Q ss_pred CCCeEEEEcCCCceEEe-cc------CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCC
Q psy2107 134 YDHSVHIWTRRGEHKLN-IP------GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERG 206 (391)
Q Consensus 134 ~dg~i~iwd~~~~~~~~-~~------~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 206 (391)
.+++|.+||.....+.. +. ........+.+ . .+.++++...++.|.+||.. +.+.+..+. ....
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~---~-~~~lyv~~~~~~~v~viD~~----t~~~~~~i~-~~~~ 85 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVI---R-DGIGWIVVNNSHVIFAIDIN----TFKEVGRIT-GFTS 85 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEE---E-TTEEEEEEGGGTEEEEEETT----TCCEEEEEE-CCSS
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEE---E-CCEEEEEEcCCCEEEEEECc----ccEEEEEcC-CCCC
Confidence 37899999996554442 21 12244667776 2 35566666778999999954 334555554 3467
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCcc-----CcccEE
Q psy2107 207 LETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHK-----EAISAV 281 (391)
Q Consensus 207 v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~ 281 (391)
...++++++++.+++...++.|.+||..+.+. ...+.... .....+
T Consensus 86 p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~-----------------------------~~~i~~g~~~~~~~~p~~i 136 (328)
T 3dsm_A 86 PRYIHFLSDEKAYVTQIWDYRIFIINPKTYEI-----------------------------TGYIECPDMDMESGSTEQM 136 (328)
T ss_dssp EEEEEEEETTEEEEEEBSCSEEEEEETTTTEE-----------------------------EEEEECTTCCTTTCBCCCE
T ss_pred CcEEEEeCCCeEEEEECCCCeEEEEECCCCeE-----------------------------EEEEEcCCccccCCCcceE
Confidence 88999999885445544889999999976432 22222111 144566
Q ss_pred EeccCCeEEEEE--CCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCC----------CcEEEEcCCCCCc
Q psy2107 282 QWTAVDEIITSS--WDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD----------KQIRLYDPKVKEG 349 (391)
Q Consensus 282 ~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d----------g~i~iwd~~~~~~ 349 (391)
++ .++.++.+. .++.|.++|+.+++....+........++++|+|++++++..+ +.|.++|..+.+
T Consensus 137 ~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~- 214 (328)
T 3dsm_A 137 VQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT- 214 (328)
T ss_dssp EE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE-
T ss_pred EE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe-
Confidence 66 567766666 4899999999999998888876667789999999988777654 789999987655
Q ss_pred ceEEEEeccc-cCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 350 AIVKSTFSSH-KEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 350 ~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
+...+... ...+..++|+|++.. |..+.. .|.+||+
T Consensus 215 --v~~~~~~~~g~~p~~la~~~d~~~-lyv~~~--~v~~~d~ 251 (328)
T 3dsm_A 215 --VEKQFKFKLGDWPSEVQLNGTRDT-LYWINN--DIWRMPV 251 (328)
T ss_dssp --EEEEEECCTTCCCEEEEECTTSCE-EEEESS--SEEEEET
T ss_pred --EEEEEecCCCCCceeEEEecCCCE-EEEEcc--EEEEEEC
Confidence 44444321 236899999995554 444433 8889886
No 190
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.53 E-value=3.5e-12 Score=111.10 Aligned_cols=218 Identities=11% Similarity=0.091 Sum_probs=139.4
Q ss_pred CcEEEEEec--CCEEEEEECC---C--eEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC----------
Q psy2107 117 DWVSAIDFH--NDWILTGCYD---H--SVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD---------- 179 (391)
Q Consensus 117 ~~V~~~~~~--~~~l~t~~~d---g--~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d---------- 179 (391)
..+.+++|+ |+.|+.++.+ + .|.+|++.+.....+..+.. +..++| +++++.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~w---spdg~~l~~~~~~~~~~~~~~~~ 134 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEW---NEDSRKLLIVGFKRREDEDFIFE 134 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEE---CTTSSEEEEEEECCCC-------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeE---CCCCCEEEEEEccCCCcCCcEEE
Confidence 457788888 6678777654 3 47778886665555544445 999999 7788888877632
Q ss_pred -----------------CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC-------cEEEEECCC
Q psy2107 180 -----------------QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC-------LLKIWSADI 235 (391)
Q Consensus 180 -----------------g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg-------~i~iwd~~~ 235 (391)
..|.+||+. .+.. +..+.. . .+..++|+|++ +++++..++ ...+|.+++
T Consensus 135 ~~~~~~~~g~~~~~~~~~~l~~~d~~--~~~~--~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~ 207 (347)
T 2gop_A 135 DDVPAWFDDLGFFDGEKTTFWIFDTE--SEEV--IEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWED 207 (347)
T ss_dssp --CCCC---------CEEEEEEEETT--TTEE--EEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEET
T ss_pred cccceeecCcccccCccceEEEEECC--CCeE--EeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCC
Confidence 467777743 3332 122322 2 78899999999 777776542 345555432
Q ss_pred CCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECC--------CeEEEEecccC
Q psy2107 236 SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWD--------HTLKIWDAELG 306 (391)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d--------g~i~iwd~~~~ 306 (391)
++ ...+..+ ..+..+ +|++ .++.++.+ ..|.+|| ++
T Consensus 208 ~~------------------------------~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~ 252 (347)
T 2gop_A 208 GK------------------------------EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GK 252 (347)
T ss_dssp TE------------------------------EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SS
T ss_pred Cc------------------------------eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CC
Confidence 11 1222223 334333 6555 46666543 4688888 55
Q ss_pred ceeEEEEC-CeeeEE-EEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCc
Q psy2107 307 GMKSEIVG-NKSFFD-VHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNS 384 (391)
Q Consensus 307 ~~~~~~~~-~~~i~~-~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~ 384 (391)
+....... ...+.. +.|+ ++ ++++++.++.++|| +..++ .. .+..+...|.+++|+| .++++++.++.
T Consensus 253 ~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~---~~-~~~~~~~~v~~~~~s~---~~~~~~~~~~~ 322 (347)
T 2gop_A 253 EVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGE---IK-PIAKGRHWIMGFDVDE---IVVYLKETATR 322 (347)
T ss_dssp CEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSS---EE-EEECSSSEEEEEEESS---SEEEEEECSSS
T ss_pred ceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCc---eE-EEecCCCeEEeeeeeC---cEEEEEcCCCC
Confidence 54333333 236775 8999 88 88999999999999 87332 32 3334577899999998 57777777776
Q ss_pred E-EEEec
Q psy2107 385 V-KLWDL 390 (391)
Q Consensus 385 v-~iwdl 390 (391)
. .||.+
T Consensus 323 ~~~l~~~ 329 (347)
T 2gop_A 323 LRELFTW 329 (347)
T ss_dssp CCEEEEE
T ss_pred hHHheEe
Confidence 5 77764
No 191
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.52 E-value=4e-12 Score=122.21 Aligned_cols=242 Identities=12% Similarity=0.032 Sum_probs=149.6
Q ss_pred CCCcEEEEEec--CCEEEEEECC-----CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCc------
Q psy2107 115 HDDWVSAIDFH--NDWILTGCYD-----HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQT------ 181 (391)
Q Consensus 115 h~~~V~~~~~~--~~~l~t~~~d-----g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~------ 181 (391)
|...+..++|+ |++|+.++.+ ..|++||+.+........+...+..++| +++ +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~w---spD-~~l~~~~~~~~~~~~~~ 236 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAW---LGN-DALLYSRFAEPKEGQAF 236 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEE---STT-SEEEEEECCCC------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEE---ECC-CEEEEEEecCccccccc
Confidence 44468888998 6677776554 3699999965544433222222357889 778 77887776654
Q ss_pred --------EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCCCCCCCCCCCCC
Q psy2107 182 --------AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC-----LLKIWSADISKERGDPSENGDE 248 (391)
Q Consensus 182 --------v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg-----~i~iwd~~~~~~~~~~~~~~~~ 248 (391)
|++|++.........+.....+...+..+.|+|+|++|+..+.++ .|.+||+.++..
T Consensus 237 ~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~---------- 306 (741)
T 1yr2_A 237 QALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKI---------- 306 (741)
T ss_dssp --CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEE----------
T ss_pred ccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCC----------
Confidence 778875422221233333233334588999999999988877544 799999865310
Q ss_pred CccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEEC----CCeEEEEecccC--ceeEEEECCe-eeEEE
Q psy2107 249 GTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSW----DHTLKIWDAELG--GMKSEIVGNK-SFFDV 321 (391)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~----dg~i~iwd~~~~--~~~~~~~~~~-~i~~~ 321 (391)
.....+..+...+....+.+++.|+..+. .+.|.+||+.++ .....+..+. .+..+
T Consensus 307 -----------------~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~ 369 (741)
T 1yr2_A 307 -----------------GPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESV 369 (741)
T ss_dssp -----------------CCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEE
T ss_pred -----------------cccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEE
Confidence 11233444444444444445666777665 345999999875 2333333333 46667
Q ss_pred EECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecc-ccCcEEEEEECCCCCCEEEEee---CCCcEEEEec
Q psy2107 322 HYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS-HKEWVQSVRWSPIDPQLFVSAS---FDNSVKLWDL 390 (391)
Q Consensus 322 ~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~---~dg~v~iwdl 390 (391)
+++ ++.++++...|+..+||.+... +. ....+.. +...|..++++|++..++++.+ ..++|++||+
T Consensus 370 ~~~-~~~lv~~~~~dg~~~l~~~~~~-g~-~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 370 GIA-GNRLFASYIHDAKSQVLAFDLD-GK-PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDP 439 (741)
T ss_dssp EEE-BTEEEEEEEETTEEEEEEEETT-SC-EEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEET
T ss_pred EEE-CCEEEEEEEECCEEEEEEEeCC-CC-ceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 777 5667788888888777755421 11 3334443 3667899999996665555544 3478999986
No 192
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.51 E-value=9.7e-12 Score=105.81 Aligned_cols=206 Identities=10% Similarity=0.034 Sum_probs=137.7
Q ss_pred ceEEeccCCCCCeeEEEEEecCCCCe-EEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC
Q psy2107 146 EHKLNIPGHGGPVKGVAWLYNDGKDA-AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW 224 (391)
Q Consensus 146 ~~~~~~~~~~~~v~~l~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~ 224 (391)
..+..+..+.....+++| +++++ +++++..++.|..|+.. .. ...+..+...+.+++++++++++++...
T Consensus 18 ~~~~~l~~~~~~~eg~~~---d~~g~~l~~~~~~~~~i~~~~~~--~~----~~~~~~~~~~~~~l~~~~dg~l~v~~~~ 88 (296)
T 3e5z_A 18 AEARRLADGFTWTEGPVY---VPARSAVIFSDVRQNRTWAWSDD--GQ----LSPEMHPSHHQNGHCLNKQGHLIACSHG 88 (296)
T ss_dssp CCCEEEECCCSSEEEEEE---EGGGTEEEEEEGGGTEEEEEETT--SC----EEEEESSCSSEEEEEECTTCCEEEEETT
T ss_pred CcEEEEecCCccccCCeE---eCCCCEEEEEeCCCCEEEEEECC--CC----eEEEECCCCCcceeeECCCCcEEEEecC
Confidence 344455556677889999 55676 78888889999999943 22 3455567778999999999998877777
Q ss_pred CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC-ccCcccEEEeccCCeEEEE-----E-----
Q psy2107 225 DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG-HKEAISAVQWTAVDEIITS-----S----- 293 (391)
Q Consensus 225 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~l~s~-----~----- 293 (391)
++.|.+||..+++... ....... ....+..+++++++.++.+ +
T Consensus 89 ~~~i~~~d~~~g~~~~--------------------------~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~ 142 (296)
T 3e5z_A 89 LRRLERQREPGGEWES--------------------------IADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEE 142 (296)
T ss_dssp TTEEEEECSTTCCEEE--------------------------EECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGG
T ss_pred CCeEEEEcCCCCcEEE--------------------------EeeccCCCCCCCCCCEEECCCCCEEEECCccccccccc
Confidence 7899999986543210 0000111 1234678999987776663 2
Q ss_pred --------CCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCC-CCCcceEEEEeccccCcEE
Q psy2107 294 --------WDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPK-VKEGAIVKSTFSSHKEWVQ 364 (391)
Q Consensus 294 --------~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~-~~~~~~~~~~~~~h~~~v~ 364 (391)
..+.|..++.. ++.............++|+|+++.+++.+.++.|++|++. .+........+..+...+.
T Consensus 143 ~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~ 221 (296)
T 3e5z_A 143 GYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTD 221 (296)
T ss_dssp SSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCC
T ss_pred cccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCC
Confidence 13456666655 5443333334467889999999988777788999999986 2221001222234556678
Q ss_pred EEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 365 SVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 365 ~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
++++++ +++++++. ++.|.+||.
T Consensus 222 ~i~~d~-~G~l~v~~--~~~v~~~~~ 244 (296)
T 3e5z_A 222 GLRVDA-GGLIWASA--GDGVHVLTP 244 (296)
T ss_dssp SEEEBT-TSCEEEEE--TTEEEEECT
T ss_pred eEEECC-CCCEEEEc--CCeEEEECC
Confidence 899999 55666655 789999985
No 193
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.50 E-value=3.3e-10 Score=96.21 Aligned_cols=231 Identities=8% Similarity=0.006 Sum_probs=155.4
Q ss_pred CCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEE-eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCC
Q psy2107 116 DDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKL-NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN 192 (391)
Q Consensus 116 ~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~-~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 192 (391)
...+.+++++ +.++++...++.|..|+.++.... .+......+.++++ ++++.++++...++.|..||. ..
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~---~~~g~l~v~~~~~~~i~~~d~---~g 129 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITE---GPNGDIWFTEMNGNRIGRITD---DG 129 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEE---CTTSCEEEEETTTTEEEEECT---TC
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEE---CCCCCEEEEecCCceEEEECC---CC
Confidence 4578889987 556666666889999998654322 22334567889998 677888887777889999984 22
Q ss_pred ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec
Q psy2107 193 SIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK 272 (391)
Q Consensus 193 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (391)
... ......+...+..+++.++++++++...++.|..||. +++. ......
T Consensus 130 ~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~----------------------------~~~~~~ 179 (299)
T 2z2n_A 130 KIR-EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDI----------------------------TEFKIP 179 (299)
T ss_dssp CEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE----------------------------EEEECS
T ss_pred CEE-EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcE----------------------------EEeeCC
Confidence 222 1222334567899999999988777777789999988 4221 001122
Q ss_pred CccCcccEEEeccCCeEEEEE-CCCeEEEEecccCceeEEEECC---eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107 273 GHKEAISAVQWTAVDEIITSS-WDHTLKIWDAELGGMKSEIVGN---KSFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348 (391)
Q Consensus 273 ~~~~~v~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~---~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~ 348 (391)
.+...+..+++.+++.++.+. .++.|.+||. +++... +... ..+.+++++++|++.++...++.|..||.. +.
T Consensus 180 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~ 256 (299)
T 2z2n_A 180 TPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN-NI 256 (299)
T ss_dssp STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT-TE
T ss_pred CCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEEEeccCCceEEEECCC-Cc
Confidence 234457789998777666665 4789999999 666433 3322 468899999999977776678899999973 22
Q ss_pred cceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 349 GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 349 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
........+...+.++++ + ++.++++.+ .+.+..+|.
T Consensus 257 --~~~~~~~~~~~~~~~i~~-~-~g~l~v~~~-~~~l~~~~~ 293 (299)
T 2z2n_A 257 --IEEYPIQIKSAEPHGICF-D-GETIWFAME-CDKIGKLTL 293 (299)
T ss_dssp --EEEEECSSSSCCEEEEEE-C-SSCEEEEET-TTEEEEEEE
T ss_pred --eEEEeCCCCCCccceEEe-c-CCCEEEEec-CCcEEEEEc
Confidence 122223455567999999 7 666666554 456666654
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.50 E-value=6.9e-11 Score=108.87 Aligned_cols=225 Identities=14% Similarity=0.076 Sum_probs=151.1
Q ss_pred CCEEEEEECCCeEEEEcCCC-ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCC
Q psy2107 126 NDWILTGCYDHSVHIWTRRG-EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHE 204 (391)
Q Consensus 126 ~~~l~t~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 204 (391)
+.++++...+++|.++|..+ +.+..+. ....+..+.| +++++++++++.|+.|.+||+. ..+.+.+..+...
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~-~g~~p~~v~~---SpDGr~lyv~~~dg~V~viD~~--~~t~~~v~~i~~G- 239 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLD-TGYAVHISRL---SASGRYLFVIGRDGKVNMIDLW--MKEPTTVAEIKIG- 239 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEE-CSSCEEEEEE---CTTSCEEEEEETTSEEEEEETT--SSSCCEEEEEECC-
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEe-CCCCccceEE---CCCCCEEEEEcCCCeEEEEECC--CCCCcEeEEEecC-
Confidence 34677777889999999954 4444554 3446778999 8899999999999999999953 1133455555543
Q ss_pred CCeEEEEEc----CCCCEEEEEeC-CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC------
Q psy2107 205 RGLETVTVS----ESRQQFATGGW-DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG------ 273 (391)
Q Consensus 205 ~~v~~l~~~----~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 273 (391)
.....++|+ |+|+++++++. ++.+.++|..+.+. +..+..
T Consensus 240 ~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~-----------------------------~~~i~~~~~~~~ 290 (567)
T 1qks_A 240 SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP-----------------------------KKIQSTRGMTYD 290 (567)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCE-----------------------------EEEEECCEECTT
T ss_pred CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcE-----------------------------EEEEeccccccc
Confidence 346799999 69998887765 58999999876332 222221
Q ss_pred ----ccC-cccEEEeccC-Ce-EEEEECCCeEEEEecccCce--eEEEECCeeeEEEEECCCCCEEEEee-CCCcEEEEc
Q psy2107 274 ----HKE-AISAVQWTAV-DE-IITSSWDHTLKIWDAELGGM--KSEIVGNKSFFDVHYSPLSKLVITAS-ADKQIRLYD 343 (391)
Q Consensus 274 ----~~~-~v~~~~~~~~-~~-l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~i~~~~~~p~~~~l~~g~-~dg~i~iwd 343 (391)
|.. .+..+..++. .. ++....+|.|.++|..+.+. +..+........+.|+|+|++++++. .++.|.++|
T Consensus 291 ~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD 370 (567)
T 1qks_A 291 EQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVID 370 (567)
T ss_dssp TCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred cccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEE
Confidence 112 4566666643 33 45556679999999876543 23333444567889999999887655 578999999
Q ss_pred CCCCCcceEEEEec-----cccCcEEEEEECCCCCCEEEEee-CCCcEEEEec
Q psy2107 344 PKVKEGAIVKSTFS-----SHKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDL 390 (391)
Q Consensus 344 ~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwdl 390 (391)
+.+++ +...+. .|.+.-..+ ++|+++.+++++. .++.|.++|.
T Consensus 371 ~~t~k---l~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~ 419 (567)
T 1qks_A 371 TKEGK---LVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGT 419 (567)
T ss_dssp TTTTE---EEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEEC
T ss_pred CCCCc---EEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecC
Confidence 98765 333332 243222222 5785566666654 4689999985
No 195
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.47 E-value=7.9e-10 Score=93.88 Aligned_cols=233 Identities=9% Similarity=-0.009 Sum_probs=157.7
Q ss_pred CCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEE-eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCC
Q psy2107 116 DDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKL-NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN 192 (391)
Q Consensus 116 ~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~-~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 192 (391)
...+.+++++ +.++++...++.|.+||..+.... .+......+.++++ ++++.+.++...++.|..||.. .
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~g~l~v~~~~~~~v~~~d~~---g 92 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIV---SSLGDIWFTENGANKIGKLSKK---G 92 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEE---CTTSCEEEEETTTTEEEEECTT---S
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEE---CCCCCEEEEecCCCeEEEECCC---C
Confidence 4467788887 566666667899999998733322 23334467889998 7778877777668889999843 2
Q ss_pred ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec
Q psy2107 193 SIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK 272 (391)
Q Consensus 193 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (391)
... ..........+.++++.++++++++...++.|..+|.. ++. ....+.
T Consensus 93 ~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~----------------------------~~~~~~ 142 (300)
T 2qc5_A 93 GFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI----------------------------YEYDLP 142 (300)
T ss_dssp CEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE----------------------------EEEECS
T ss_pred CeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE----------------------------EEccCC
Confidence 222 12222234678999999999988777768889999875 221 011122
Q ss_pred CccCcccEEEeccCCeEEEEEC-CCeEEEEecccCceeEEEEC---CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107 273 GHKEAISAVQWTAVDEIITSSW-DHTLKIWDAELGGMKSEIVG---NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348 (391)
Q Consensus 273 ~~~~~v~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~---~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~ 348 (391)
.....+..+++.+++.++.+.. ++.|..||. +++... +.. ...+..+++.++|++.++....+.|.+|+. .+.
T Consensus 143 ~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~ 219 (300)
T 2qc5_A 143 NKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGE 219 (300)
T ss_dssp STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred CCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCc
Confidence 2344678888887666666554 788999998 555443 332 235788999999987777766788999997 332
Q ss_pred cceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 349 GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 349 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
........+...+.++++++ +++++++...++.|..||.
T Consensus 220 --~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 220 --ISEYDIPTPNARPHAITAGK-NSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp --EEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECT
T ss_pred --EEEEECCCCCCCceEEEECC-CCCEEEeccCCCeEEEECC
Confidence 12222334556789999999 5566776666788888874
No 196
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.46 E-value=1.9e-10 Score=102.24 Aligned_cols=234 Identities=9% Similarity=0.018 Sum_probs=154.0
Q ss_pred CcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCC--cEEEEeecCCCC
Q psy2107 117 DWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQ--TAMIWEWKVESN 192 (391)
Q Consensus 117 ~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~ 192 (391)
.....|+++ ++++++...++.|++||..+..+..+........ ++| ++++..|+++..++ .|.+++.. ..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~---~~~g~~l~~~d~~~~~~I~~~d~~--~~ 204 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAV---TKDKQRVYSIGWEGTHTVYVYMKA--SG 204 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEE---CTTSSEEEEEBSSTTCEEEEEEGG--GT
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeE---ecCCCcEEEEecCCCceEEEEEcC--CC
Confidence 357788887 5566666677999999997666555443333334 888 77888888888766 67777743 22
Q ss_pred ce-eEEEEEec-CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee
Q psy2107 193 SI-ECIHVCRG-HERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT 270 (391)
Q Consensus 193 ~~-~~~~~~~~-~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (391)
.. ..+..+.. ....+.+++++|++..|+.+..++.|+.||..++... ....
T Consensus 205 ~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~---------------------------~~~~ 257 (409)
T 3hrp_A 205 WAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT---------------------------LIKQ 257 (409)
T ss_dssp TCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE---------------------------EEEE
T ss_pred ceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE---------------------------EEec
Confidence 21 12212222 4566789999995555666777889999998753210 0000
Q ss_pred --ecCccCcc--cEEEecc-CCeEEEE-ECCCeEEEEecccCceeEEEECC----------------eeeEEEEECCCCC
Q psy2107 271 --LKGHKEAI--SAVQWTA-VDEIITS-SWDHTLKIWDAELGGMKSEIVGN----------------KSFFDVHYSPLSK 328 (391)
Q Consensus 271 --~~~~~~~v--~~~~~~~-~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~----------------~~i~~~~~~p~~~ 328 (391)
..++...- ..++|++ ++.|+.+ ...+.|+.|+.... . ..+... .....++++|+|+
T Consensus 258 ~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~ 335 (409)
T 3hrp_A 258 LELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-C-EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN 335 (409)
T ss_dssp CCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-E-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC
T ss_pred ccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-E-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC
Confidence 11111111 3899997 5776655 45789999987643 2 222221 2367899999999
Q ss_pred EEEEee-CCCcEEEEcCCCCCcceEEEEeccc---------------cCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 329 LVITAS-ADKQIRLYDPKVKEGAIVKSTFSSH---------------KEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 329 ~l~~g~-~dg~i~iwd~~~~~~~~~~~~~~~h---------------~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
++++-+ .++.|+.|++..+. +..+.++ -.....+++++ ++.++++-..++.|+.+++
T Consensus 336 lyvad~~~~~~I~~~~~~~G~----v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~-~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 336 FYIVDGFKGYCLRKLDILDGY----VSTVAGQVDVASQIDGTPLEATFNYPYDICYDG-EGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEETTTTCEEEEEETTTTE----EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECS-SSEEEEEESTTCEEEEEEE
T ss_pred EEEEeCCCCCEEEEEECCCCE----EEEEeCCCCCCCcCCCChhceEeCCceEEEEcC-CCCEEEEECCCCeEEEEEe
Confidence 888877 78999999975543 2333333 24689999999 4778888888899998876
No 197
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.45 E-value=1.7e-10 Score=98.04 Aligned_cols=225 Identities=12% Similarity=0.125 Sum_probs=144.8
Q ss_pred cEEEEEec---CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCce
Q psy2107 118 WVSAIDFH---NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSI 194 (391)
Q Consensus 118 ~V~~~~~~---~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 194 (391)
.--+..|+ +.++++...++.|..||..+.....+ .....+.++++ ++++.++++ . ++.|.+||.. +...
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-~~~~~~~~i~~---~~dG~l~v~-~-~~~l~~~d~~--~g~~ 85 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV-TMDAPVSSVAL---RQSGGYVAT-I-GTKFCALNWK--EQSA 85 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE-ECSSCEEEEEE---BTTSSEEEE-E-TTEEEEEETT--TTEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEE-eCCCceEEEEE---CCCCCEEEE-E-CCeEEEEECC--CCcE
Confidence 44566776 33677777789999999966544433 24567899999 677875554 4 5678888843 3333
Q ss_pred eEEEEEec--CCCCeEEEEEcCCCCEEEEEeCC---------CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107 195 ECIHVCRG--HERGLETVTVSESRQQFATGGWD---------CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS 263 (391)
Q Consensus 195 ~~~~~~~~--~~~~v~~l~~~~~~~~l~sg~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (391)
..+..... ....+..++++|+|+++++...+ ..-.+|.++...
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-------------------------- 139 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-------------------------- 139 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS--------------------------
T ss_pred EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC--------------------------
Confidence 33332211 12357889999999966654321 234555553211
Q ss_pred CCCceeeecCccCcccEEEeccCCe-E-EEEECCCeEEEEec--ccCcee--EEE-EC---CeeeEEEEECCCCCEEEEe
Q psy2107 264 SRTPLITLKGHKEAISAVQWTAVDE-I-ITSSWDHTLKIWDA--ELGGMK--SEI-VG---NKSFFDVHYSPLSKLVITA 333 (391)
Q Consensus 264 ~~~~~~~~~~~~~~v~~~~~~~~~~-l-~s~~~dg~i~iwd~--~~~~~~--~~~-~~---~~~i~~~~~~p~~~~l~~g 333 (391)
....+..+......++|++++. + ++.+.++.|.+||+ .++... ..+ .. ......++++++|++.++.
T Consensus 140 ---~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~ 216 (297)
T 3g4e_A 140 ---HVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVAC 216 (297)
T ss_dssp ---CEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEE
T ss_pred ---CEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEE
Confidence 1112222334457899997664 5 44556789999987 455432 112 11 2357789999999988887
Q ss_pred eCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEEC-CCCCCEEEEeeCC
Q psy2107 334 SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS-PIDPQLFVSASFD 382 (391)
Q Consensus 334 ~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~~l~s~~~d 382 (391)
...+.|..||..+++ +...+..+...+++++|. |++..++++...+
T Consensus 217 ~~~~~v~~~d~~tG~---~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 217 YNGGRVIRLDPVTGK---RLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp ETTTEEEEECTTTCC---EEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred cCCCEEEEEcCCCce---EEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 778899999987666 666666666789999998 7666666666544
No 198
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.43 E-value=4.8e-11 Score=100.08 Aligned_cols=179 Identities=9% Similarity=0.040 Sum_probs=132.1
Q ss_pred CCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCC-CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCC
Q psy2107 169 KDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHE-RGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGD 247 (391)
Q Consensus 169 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~ 247 (391)
.+++|++++.|+.|.+||.. +.+.+..+..+. ..+.++.+.|+|++++ +.++.|..||. +++
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~----tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~---------- 66 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKD----TKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGR---------- 66 (276)
T ss_dssp CCEEEEECTTCSEEEEEETT----TTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSC----------
T ss_pred CCcEEEeeCCCCEEEEEECC----CCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCC----------
Confidence 46889999999999999932 446677777665 4789999999999888 45678999998 533
Q ss_pred CCccccccccccccCCCCCceeeecCc-cCcccEEEeccCCe-EEEEEC-CCeEEEEecccCceeEEEECC-------ee
Q psy2107 248 EGTTSKKRKKEYSSASSRTPLITLKGH-KEAISAVQWTAVDE-IITSSW-DHTLKIWDAELGGMKSEIVGN-------KS 317 (391)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~-l~s~~~-dg~i~iwd~~~~~~~~~~~~~-------~~ 317 (391)
.+..+..+ ...+.++.+.+++. +++.+. ++.|..+|. +++.+..+... ..
T Consensus 67 -------------------~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~ 126 (276)
T 3no2_A 67 -------------------ELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQ 126 (276)
T ss_dssp -------------------EEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGS
T ss_pred -------------------EEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCccccc
Confidence 34444433 24567788886665 555565 678888885 78877776522 23
Q ss_pred eEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 318 FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 318 i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
...+++.++|+++++...++.|..||.. ++ .+..+... ..+.++...+ ++.++++++.++.|..+|.
T Consensus 127 ~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~---~~w~~~~~-~~~~~~~~~~-~g~~~v~~~~~~~v~~~d~ 193 (276)
T 3no2_A 127 FRQINKNKKGNYLVPLFATSEVREIAPN-GQ---LLNSVKLS-GTPFSSAFLD-NGDCLVACGDAHCFVQLNL 193 (276)
T ss_dssp CSCCEECTTSCEEEEETTTTEEEEECTT-SC---EEEEEECS-SCCCEEEECT-TSCEEEECBTTSEEEEECT
T ss_pred ccCceECCCCCEEEEecCCCEEEEECCC-CC---EEEEEECC-CCccceeEcC-CCCEEEEeCCCCeEEEEeC
Confidence 4456788999999999999999999986 55 55555543 3456778888 6678888888888988875
No 199
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.42 E-value=5.5e-11 Score=113.84 Aligned_cols=201 Identities=10% Similarity=0.009 Sum_probs=130.1
Q ss_pred CCCCeeEEEEEecCCCCeEEEEEeCCC-----cEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCc-
Q psy2107 154 HGGPVKGVAWLYNDGKDAAFISVSTDQ-----TAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCL- 227 (391)
Q Consensus 154 ~~~~v~~l~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~- 227 (391)
|...+..++| +|++++|+.+..++ .|++||+. ++..... .+. + ..+..++|+|+|+.|+.++.++.
T Consensus 123 ~~~~~~~~~~---SPDg~~la~~~~~~G~~~~~i~v~d~~--tg~~~~~-~~~-~-~~~~~~~wspDg~~l~~~~~~~~~ 194 (710)
T 2xdw_A 123 GTVALRGYAF---SEDGEYFAYGLSASGSDWVTIKFMKVD--GAKELPD-VLE-R-VKFSCMAWTHDGKGMFYNAYPQQD 194 (710)
T ss_dssp SCEEEEEEEE---CTTSSEEEEEEEETTCSCEEEEEEETT--TTEEEEE-EEE-E-ECSCCEEECTTSSEEEEEECCCCS
T ss_pred CCEEEEEEEE---CCCCCEEEEEEcCCCCceEEEEEEECC--CCCCCcc-ccc-C-cccceEEEEeCCCEEEEEEECCcc
Confidence 4446888999 78899888776543 89999964 3332221 222 1 23678999999999999888766
Q ss_pred ---------------EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEE
Q psy2107 228 ---------------LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IIT 291 (391)
Q Consensus 228 ---------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s 291 (391)
|++|++.++... ...+.....|...+..+.|+|++. |+.
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~l~t~~~~-------------------------~~~v~~~~~~~~~~~~~~~SpDg~~l~~ 249 (710)
T 2xdw_A 195 GKSDGTETSTNLHQKLYYHVLGTDQSE-------------------------DILCAEFPDEPKWMGGAELSDDGRYVLL 249 (710)
T ss_dssp SCCSSSCCCCCCCCEEEEEETTSCGGG-------------------------CEEEECCTTCTTCEEEEEECTTSCEEEE
T ss_pred ccccccccccCCCCEEEEEECCCCccc-------------------------ceEEeccCCCCeEEEEEEEcCCCCEEEE
Confidence 999998763320 011222223455577899997665 555
Q ss_pred EEC-----CCeEEEEeccc------Cc-eeEEEECCe-eeEEEEECCCCCEEEEeeCC----CcEEEEcCCCCCcceEEE
Q psy2107 292 SSW-----DHTLKIWDAEL------GG-MKSEIVGNK-SFFDVHYSPLSKLVITASAD----KQIRLYDPKVKEGAIVKS 354 (391)
Q Consensus 292 ~~~-----dg~i~iwd~~~------~~-~~~~~~~~~-~i~~~~~~p~~~~l~~g~~d----g~i~iwd~~~~~~~~~~~ 354 (391)
++. +..|.+||+.+ +. ....+..+. .+. ..|+|+|+.|+..+.. +.|.+||+........ .
T Consensus 250 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~-~ 327 (710)
T 2xdw_A 250 SIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY-DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKW-K 327 (710)
T ss_dssp EEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE-EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGC-E
T ss_pred EEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccc-e
Confidence 543 56899999987 53 344554443 333 3588899877766543 3699999876532111 2
Q ss_pred EeccccC--cEEEEEECCCCCCEEEEeeCCCcE--EEEec
Q psy2107 355 TFSSHKE--WVQSVRWSPIDPQLFVSASFDNSV--KLWDL 390 (391)
Q Consensus 355 ~~~~h~~--~v~~~~~~~~~~~~l~s~~~dg~v--~iwdl 390 (391)
.+..|.. .+..++|++ ++.++++...|+.. .+||+
T Consensus 328 ~l~~~~~~~~~~~~~~~~-~~~lv~~~~~~g~~~l~~~~~ 366 (710)
T 2xdw_A 328 VLVPEHEKDVLEWVACVR-SNFLVLCYLHDVKNTLQLHDL 366 (710)
T ss_dssp EEECCCSSCEEEEEEEET-TTEEEEEEEETTEEEEEEEET
T ss_pred eccCCCCCCeEEEEEEEc-CCEEEEEEEECCEEEEEEEEC
Confidence 3333433 688899997 67788999999865 45554
No 200
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.41 E-value=3.4e-11 Score=114.95 Aligned_cols=201 Identities=8% Similarity=-0.008 Sum_probs=130.6
Q ss_pred CCCCCeeEEEEEecCCCCeEEE-----EEeCCCcEEEEeecCCCCceeEEEEEecCCCCe--EEEEEcCCCCEEEEEeCC
Q psy2107 153 GHGGPVKGVAWLYNDGKDAAFI-----SVSTDQTAMIWEWKVESNSIECIHVCRGHERGL--ETVTVSESRQQFATGGWD 225 (391)
Q Consensus 153 ~~~~~v~~l~~~~~~~~~~~l~-----s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v--~~l~~~~~~~~l~sg~~d 225 (391)
+|...+..++| +|++++|| .|+.+..|++||+... .. +. ..+...+ ..++|+|+|+.|+.++.|
T Consensus 118 ~~~~~~~~~~~---SPDG~~la~~~~~~G~~~~~i~v~dl~tg--~~--~~--~~~~~~~~~~~~~wspDg~~l~~~~~d 188 (695)
T 2bkl_A 118 DGTVSLGTWAV---SWDGKKVAFAQKPNAADEAVLHVIDVDSG--EW--SK--VDVIEGGKYATPKWTPDSKGFYYEWLP 188 (695)
T ss_dssp SSCEEEEEEEE---CTTSSEEEEEEEETTCSCCEEEEEETTTC--CB--CS--SCCBSCCTTCCCEECTTSSEEEEEECC
T ss_pred CCCEEEEEEEE---CCCCCEEEEEECCCCCceEEEEEEECCCC--CC--cC--CcccCcccccceEEecCCCEEEEEEec
Confidence 45557889999 78899888 4445578999996532 21 10 1122222 689999999999999887
Q ss_pred Cc-------------EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEE
Q psy2107 226 CL-------------LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IIT 291 (391)
Q Consensus 226 g~-------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s 291 (391)
.. |++|++.++... ...+.....+...+..+.|++++. |+.
T Consensus 189 ~~~~~~~~~~~~~~~v~~~~l~t~~~~-------------------------~~lv~~~~~~~~~~~~~~~SpDG~~l~~ 243 (695)
T 2bkl_A 189 TDPSIKVDERPGYTTIRYHTLGTEPSK-------------------------DTVVHERTGDPTTFLQSDLSRDGKYLFV 243 (695)
T ss_dssp CCTTSCGGGGGGGCEEEEEETTSCGGG-------------------------CEEEECCCCCTTCEEEEEECTTSCCEEE
T ss_pred CCCCCccccCCCCCEEEEEECCCCchh-------------------------ceEEEecCCCCEEEEEEEECCCCCEEEE
Confidence 76 999999764320 112233334556788999997664 666
Q ss_pred EECCC----eEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEee---CCCcEEEEcCCCCCcceEEEEeccc-cCcE
Q psy2107 292 SSWDH----TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITAS---ADKQIRLYDPKVKEGAIVKSTFSSH-KEWV 363 (391)
Q Consensus 292 ~~~dg----~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~---~dg~i~iwd~~~~~~~~~~~~~~~h-~~~v 363 (391)
++.++ .|.+||..++................+ ++|.+++.+. .++.|.+||+.++........+..+ ...+
T Consensus 244 ~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l 322 (695)
T 2bkl_A 244 YILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASL 322 (695)
T ss_dssp EEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEE
T ss_pred EEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeE
Confidence 66555 677777666655444444445555556 5666444443 2578999998765421112233333 4568
Q ss_pred EEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 364 QSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 364 ~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
..++|+ ++.++++...|+..+||.+
T Consensus 323 ~~~~~~--~~~lv~~~~~dg~~~l~~~ 347 (695)
T 2bkl_A 323 LSVSIV--GGHLSLEYLKDATSEVRVA 347 (695)
T ss_dssp EEEEEE--TTEEEEEEEETTEEEEEEE
T ss_pred EEEEEE--CCEEEEEEEECCEEEEEEE
Confidence 888887 5578999999999988854
No 201
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.40 E-value=4.9e-11 Score=113.66 Aligned_cols=239 Identities=13% Similarity=0.129 Sum_probs=146.8
Q ss_pred CCCcEEEEEec--CCEEEEE-E----CCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCc------
Q psy2107 115 HDDWVSAIDFH--NDWILTG-C----YDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQT------ 181 (391)
Q Consensus 115 h~~~V~~~~~~--~~~l~t~-~----~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~------ 181 (391)
|...+..++|+ |++||-+ + ....|++||+.+........+......++| + +++.|+.++.+..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~W---s-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISW---L-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEE---E-TTTEEEEEESSCCC-----
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEE---e-CCCEEEEEEecCccccccc
Confidence 56678888998 5566633 2 235799999955443322111111356789 6 7777888877743
Q ss_pred -------EEEEeecCCCCceeEEEEEec-CCCCeEEEEEcCCCCEEEEEeC----CCcEEEEECCCCCCCCCCCCCCCCC
Q psy2107 182 -------AMIWEWKVESNSIECIHVCRG-HERGLETVTVSESRQQFATGGW----DCLLKIWSADISKERGDPSENGDEG 249 (391)
Q Consensus 182 -------v~iwd~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~sg~~----dg~i~iwd~~~~~~~~~~~~~~~~~ 249 (391)
|++|++.........+..... |...+..+.|+|+|++|+.... +..|.++|+.++..
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~----------- 271 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA----------- 271 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC-----------
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC-----------
Confidence 888886533333344444333 4556788999999998865432 35899999875321
Q ss_pred ccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEE-CC---CeEEEEecccCce--eEEEECC-eeeEEEE
Q psy2107 250 TTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSS-WD---HTLKIWDAELGGM--KSEIVGN-KSFFDVH 322 (391)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~-~d---g~i~iwd~~~~~~--~~~~~~~-~~i~~~~ 322 (391)
....+..+.........++++.|+..+ .+ +.|..+|+.++.. ...+..+ ..+. .
T Consensus 272 -----------------~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~ 332 (693)
T 3iuj_A 272 -----------------PLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--T 332 (693)
T ss_dssp -----------------CCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--E
T ss_pred -----------------ceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--E
Confidence 233444455555454333556655444 33 6799999987654 2344333 3443 8
Q ss_pred ECCCCCEEEEeeCCC---cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCC---CcEEEEec
Q psy2107 323 YSPLSKLVITASADK---QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD---NSVKLWDL 390 (391)
Q Consensus 323 ~~p~~~~l~~g~~dg---~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d---g~v~iwdl 390 (391)
|+++++.|+....++ .|++|++.... .........+.+..+.+++++..++++.+.. +.+..||+
T Consensus 333 ~s~~g~~lv~~~~~~g~~~l~~~d~~g~~---~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 333 VHSGSGYLFAEYMVDATARVEQFDYEGKR---VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP 403 (693)
T ss_dssp EEEETTEEEEEEEETTEEEEEEECTTSCE---EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred EEEECCEEEEEEEECCeeEEEEEECCCCe---eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence 889998887765544 68999986432 2222223445678888888666666665532 67888876
No 202
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.40 E-value=6.2e-11 Score=99.25 Aligned_cols=194 Identities=8% Similarity=-0.004 Sum_probs=133.1
Q ss_pred CcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccC-CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCc
Q psy2107 117 DWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPG-HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNS 193 (391)
Q Consensus 117 ~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 193 (391)
..+.+++++ ++++++.. ++.|.+||..+.....+.. ....+..+++ ++++.++++...++.|.+|+. ....
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~---~~~g~l~v~~~~~~~i~~~~~--~~~~ 140 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAV---DTQGAVYVADRGNNRVVKLAA--GSKT 140 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEE---CTTCCEEEEEGGGTEEEEECT--TCCS
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEE---CCCCCEEEEECCCCEEEEEEC--CCce
Confidence 456778887 55555444 8899999997765554432 2356889999 777888887777889999973 2221
Q ss_pred eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC
Q psy2107 194 IECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG 273 (391)
Q Consensus 194 ~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (391)
...........+.+++++++++++++...++.|.+||...... ......
T Consensus 141 --~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~-----------------------------~~~~~~ 189 (270)
T 1rwi_B 141 --QTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ-----------------------------VVLPFT 189 (270)
T ss_dssp --CEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE-----------------------------EECCCS
T ss_pred --eEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce-----------------------------Eeeccc
Confidence 1111222334678999999999777777788999999865221 111112
Q ss_pred ccCcccEEEeccCCeEEEEE-CCCeEEEEecccCceeEEEECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC
Q psy2107 274 HKEAISAVQWTAVDEIITSS-WDHTLKIWDAELGGMKSEIVGN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVK 347 (391)
Q Consensus 274 ~~~~v~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~ 347 (391)
+...+..+++++++.++.+. .++.|.+||............. ..+.+++++++|+++++...++.|++|++...
T Consensus 190 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 190 DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 22556789999776766555 5789999998765433222122 46789999999998888888999999997643
No 203
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.39 E-value=6.2e-12 Score=109.33 Aligned_cols=167 Identities=9% Similarity=0.011 Sum_probs=123.1
Q ss_pred cEEEEEec--CCEEEEEECCCeEEEEcCCC------------ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEE
Q psy2107 118 WVSAIDFH--NDWILTGCYDHSVHIWTRRG------------EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAM 183 (391)
Q Consensus 118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~~~------------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~ 183 (391)
.++.++++ ..++++|+.++ +.+|+++. +.... ..+.. |+.|+| ++..|+++ .++.|+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~-~~lp~-V~~l~f-----d~~~L~v~-~~~~l~ 109 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWE-KEIPD-VIFVCF-----HGDQVLVS-TRNALY 109 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEE-EECTT-EEEEEE-----ETTEEEEE-ESSEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEE-eeCCC-eeEEEE-----CCCEEEEE-cCCcEE
Confidence 56677776 66899999885 56697521 11122 23566 999999 56788888 889999
Q ss_pred EEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107 184 IWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS 263 (391)
Q Consensus 184 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (391)
+||++... .......|...+.++.+.+.. +++++.||.|.+||+.++.
T Consensus 110 v~dv~sl~----~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~-------------------------- 157 (388)
T 1xip_A 110 SLDLEELS----EFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKS-------------------------- 157 (388)
T ss_dssp EEESSSTT----CEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCC--------------------------
T ss_pred EEEchhhh----ccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCc--------------------------
Confidence 99965322 223345567788888877653 8889999999999997522
Q ss_pred CCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCce--eEEE------E----CCeeeEEEEECCCCCEEE
Q psy2107 264 SRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGM--KSEI------V----GNKSFFDVHYSPLSKLVI 331 (391)
Q Consensus 264 ~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~------~----~~~~i~~~~~~p~~~~l~ 331 (391)
.. .+...|+|++|+|.+ ++.|..||++++|+...+.. ..++ . +...+.++.|.+++.+++
T Consensus 158 ---~~----~~~~~Vs~v~WSpkG-~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv 229 (388)
T 1xip_A 158 ---TK----QLAQNVTSFDVTNSQ-LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLA 229 (388)
T ss_dssp ---EE----EEEESEEEEEECSSE-EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEE
T ss_pred ---cc----cccCCceEEEEcCCc-eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEE
Confidence 11 145689999999988 78899999999999887775 5566 2 345899999999999888
Q ss_pred Ee
Q psy2107 332 TA 333 (391)
Q Consensus 332 ~g 333 (391)
+-
T Consensus 230 ~y 231 (388)
T 1xip_A 230 VF 231 (388)
T ss_dssp EE
T ss_pred EE
Confidence 73
No 204
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.37 E-value=2.2e-09 Score=93.93 Aligned_cols=240 Identities=9% Similarity=-0.033 Sum_probs=139.1
Q ss_pred eEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEe----------CCCcEEEEeecCCCCceeEEEEEecC--
Q psy2107 137 SVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVS----------TDQTAMIWEWKVESNSIECIHVCRGH-- 203 (391)
Q Consensus 137 ~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~~~~~-- 203 (391)
+|.+||. +++.+..+..-..+ .+++ +++++.++.+. .++.|.+||.. ..+.+..+...
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~---spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~----t~~~~~~i~~~~~ 118 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP--NPVA---AHSGSEFALASTSFSRIAKGKRTDYVEVFDPV----TFLPIADIELPDA 118 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC--CeEE---CCCCCEEEEEeccccccccCCCCCeEEEEECC----CCcEEEEEECCCc
Confidence 8899998 44555555543333 8899 77888888775 36789999954 22333333211
Q ss_pred -----CCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCCCCC-CCCCCCCCccc-c---------ccccccccCCCC
Q psy2107 204 -----ERGLETVTVSESRQQFATGGW--DCLLKIWSADISKERGD-PSENGDEGTTS-K---------KRKKEYSSASSR 265 (391)
Q Consensus 204 -----~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~-~---------~~~~~~~~~~~~ 265 (391)
......++|+|+|++|+++.. ++.|.++| .+++.... ........... . .......+. ..
T Consensus 119 ~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g 196 (373)
T 2mad_H 119 PRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH-AG 196 (373)
T ss_pred cccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEEC-CC
Confidence 123458999999999998874 47899999 88776544 32211100000 0 000000111 11
Q ss_pred Cceeeec-----CccCcc-cEEEec-cCCeEEEEECCCeEEEEecccCc--eeEEEEC-----------CeeeEEEEECC
Q psy2107 266 TPLITLK-----GHKEAI-SAVQWT-AVDEIITSSWDHTLKIWDAELGG--MKSEIVG-----------NKSFFDVHYSP 325 (391)
Q Consensus 266 ~~~~~~~-----~~~~~v-~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~-----------~~~i~~~~~~p 325 (391)
+...... ....++ ....+. .++.++..+..+.+.+.|+..+. .+..+.. +.....++++|
T Consensus 197 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~ 276 (373)
T 2mad_H 197 GAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLK 276 (373)
T ss_pred cEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECC
Confidence 1110100 001111 112233 23444444577889999987553 2222221 12234478899
Q ss_pred CCCEEEEeeC----------CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEee-CCCcEEEEecC
Q psy2107 326 LSKLVITASA----------DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDLR 391 (391)
Q Consensus 326 ~~~~l~~g~~----------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwdlr 391 (391)
+++.+.++.. .+.|.++|+.+.+ .+..+. -.....+++|+|++..+++++. .++.|.+||++
T Consensus 277 d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~---vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~ 349 (373)
T 2mad_H 277 SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ---TSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred CCCEEEEEeccCCcccccCCCCeEEEEECCCCE---EEEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECC
Confidence 9887777543 3579999998766 555554 2335899999996553666666 58999999974
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.37 E-value=4.6e-09 Score=89.12 Aligned_cols=232 Identities=9% Similarity=0.023 Sum_probs=152.9
Q ss_pred CCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEE-eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCC
Q psy2107 116 DDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKL-NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN 192 (391)
Q Consensus 116 ~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~-~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 192 (391)
...+.+++++ +.++++...++.|..||..+.... ........+.++++ ++++.++++...++.|..++.. .
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~---~~~g~l~v~~~~~~~i~~~~~~---g 134 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKKGGFTEYPLPQPDSGPYGITE---GLNGDIWFTQLNGDRIGKLTAD---G 134 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEE---CSTTCEEEEETTTTEEEEECTT---S
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCCCCeEEecCCCCCCCCccceE---CCCCCEEEEccCCCeEEEECCC---C
Confidence 3568888887 556666666789999998754332 22334467889998 6678877777778889888842 2
Q ss_pred ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec
Q psy2107 193 SIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK 272 (391)
Q Consensus 193 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (391)
... ...+......+.++++.++++++++...++.|..+|. +++. ......
T Consensus 135 ~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~----------------------------~~~~~~ 184 (300)
T 2qc5_A 135 TIY-EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKL----------------------------EEYPLP 184 (300)
T ss_dssp CEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE----------------------------EEEECS
T ss_pred CEE-EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcE----------------------------EEeeCC
Confidence 222 1223334567899999999997666666788999987 3221 011122
Q ss_pred CccCcccEEEeccCCeEEEEEC-CCeEEEEecccCceeEEEE--CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCc
Q psy2107 273 GHKEAISAVQWTAVDEIITSSW-DHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEG 349 (391)
Q Consensus 273 ~~~~~v~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~--~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~ 349 (391)
.+...+..+++.+++.++.+.. .+.|.+||. ++....... ....+.+++++++|++.++...++.|..||.. +.
T Consensus 185 ~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~- 261 (300)
T 2qc5_A 185 TNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND-NT- 261 (300)
T ss_dssp STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC-
T ss_pred CCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC-Cc-
Confidence 2345577889987777666654 568999998 555433221 22467899999999977776667899999973 22
Q ss_pred ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 350 AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 350 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
.....+......+.++++++ ++.++++.. . .|..+|.
T Consensus 262 -~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 262 -IQEYQLQTENAEPHGITFGK-DGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp -EEEEECCSTTCCCCCEEECT-TSCEEEECS-S-EEEEEEE
T ss_pred -EEEEECCccCCccceeEeCC-CCCEEEEcc-C-ceEEeCC
Confidence 12222333456689999999 556555554 4 7776664
No 206
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.34 E-value=1.8e-09 Score=93.01 Aligned_cols=222 Identities=8% Similarity=-0.019 Sum_probs=136.8
Q ss_pred EEEEEecC---CEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCcee
Q psy2107 119 VSAIDFHN---DWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE 195 (391)
Q Consensus 119 V~~~~~~~---~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 195 (391)
..+..|++ .++++...++.|..||..+.....+. ....+.+++|. +++.++++. .+ .|.+||.. +....
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~v~~i~~~---~dg~l~v~~-~~-gl~~~d~~--~g~~~ 122 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA-LPFMGSALAKI---SDSKQLIAS-DD-GLFLRDTA--TGVLT 122 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-CSSCEEEEEEE---ETTEEEEEE-TT-EEEEEETT--TCCEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-CCCcceEEEEe---CCCeEEEEE-CC-CEEEEECC--CCcEE
Confidence 45667763 36667777899999999766554443 35679999994 467766654 44 48888843 33333
Q ss_pred EEEEEec--CCCCeEEEEEcCCCCEEEEEeCC----CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107 196 CIHVCRG--HERGLETVTVSESRQQFATGGWD----CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI 269 (391)
Q Consensus 196 ~~~~~~~--~~~~v~~l~~~~~~~~l~sg~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (391)
.+..... ....+..++++|+|+++++...+ +...+|.+++++ ..
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~------------------------------~~ 172 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGK------------------------------VT 172 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTE------------------------------EE
T ss_pred EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCc------------------------------EE
Confidence 2221111 12358899999999976654321 223344332211 11
Q ss_pred eecCccCcccEEEeccCC-eEEEE-ECCCeEEEEecc--cC-cee--EEEE----CCeeeEEEEECCCCCEEEEeeCCCc
Q psy2107 270 TLKGHKEAISAVQWTAVD-EIITS-SWDHTLKIWDAE--LG-GMK--SEIV----GNKSFFDVHYSPLSKLVITASADKQ 338 (391)
Q Consensus 270 ~~~~~~~~v~~~~~~~~~-~l~s~-~~dg~i~iwd~~--~~-~~~--~~~~----~~~~i~~~~~~p~~~~l~~g~~dg~ 338 (391)
.+..+......++|++++ .++.+ +.++.|.+||+. ++ ... ..+. .......++++++|++.++...++.
T Consensus 173 ~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~ 252 (326)
T 2ghs_A 173 KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGA 252 (326)
T ss_dssp EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTE
T ss_pred EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCE
Confidence 111222345688999766 45444 557899999986 55 321 1221 1235678999999998877766789
Q ss_pred EEEEcCCCCCcceEEEEeccccCcEEEEEEC-CCCCCEEEEeeCC
Q psy2107 339 IRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS-PIDPQLFVSASFD 382 (391)
Q Consensus 339 i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~~l~s~~~d 382 (391)
|.+||.. ++ ....+..+...+++++|+ |+++.++++...+
T Consensus 253 v~~~d~~-g~---~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 253 VDRYDTD-GN---HIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EEEECTT-CC---EEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred EEEECCC-CC---EEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 9999973 33 444555566679999998 7555555665554
No 207
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.28 E-value=2.6e-09 Score=91.07 Aligned_cols=228 Identities=8% Similarity=0.044 Sum_probs=140.5
Q ss_pred CCCcEEEEEec--CC-EEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107 115 HDDWVSAIDFH--ND-WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES 191 (391)
Q Consensus 115 h~~~V~~~~~~--~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 191 (391)
+........|+ ++ +++++..++.|..|+.++. ...+..+...+..+++ +++++++++...++.|..|+.+
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~-~~~~~~~~~~~~gl~~---d~dG~l~v~~~~~~~v~~~~~~--- 115 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGT-VDVLLDATAFTNGNAV---DAQQRLVHCEHGRRAITRSDAD--- 115 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSC-EEEEEESCSCEEEEEE---CTTSCEEEEETTTTEEEEECTT---
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCC-EEEEeCCCCccceeeE---CCCCCEEEEECCCCEEEEECCC---
Confidence 44466777886 55 6777778899999998654 4444556677889999 7788877666666889999842
Q ss_pred CceeEEEE-EecC-CCCeEEEEEcCCCCEEEE----EeC-------------CCcEEEEECCCCCCCCCCCCCCCCCccc
Q psy2107 192 NSIECIHV-CRGH-ERGLETVTVSESRQQFAT----GGW-------------DCLLKIWSADISKERGDPSENGDEGTTS 252 (391)
Q Consensus 192 ~~~~~~~~-~~~~-~~~v~~l~~~~~~~~l~s----g~~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 252 (391)
.....+.. ..+. ...+..+++.++|+++++ |.. .+.|..||..+++.
T Consensus 116 g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~-------------- 181 (305)
T 3dr2_A 116 GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL-------------- 181 (305)
T ss_dssp SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC--------------
T ss_pred CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE--------------
Confidence 22222211 1111 234678999999998876 332 24566666544221
Q ss_pred cccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECC------CeEEEEecccCcee--EEEE--CCeeeEEE
Q psy2107 253 KKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWD------HTLKIWDAELGGMK--SEIV--GNKSFFDV 321 (391)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d------g~i~iwd~~~~~~~--~~~~--~~~~i~~~ 321 (391)
. .+. .......++|++++. |+.+... +.|.+|++..+... ..+. .......+
T Consensus 182 ---------------~-~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi 244 (305)
T 3dr2_A 182 ---------------Q-RMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGF 244 (305)
T ss_dssp ---------------E-EEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSE
T ss_pred ---------------E-EEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeE
Confidence 1 111 233456789997764 6666554 78999998765411 1111 12234568
Q ss_pred EECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107 322 HYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 322 ~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 389 (391)
+++++|++.++ +.+ .|.+|+.. ++ ....+..+. .+.+++|+|+ +..|..++.++ +..++
T Consensus 245 ~~d~~G~lwv~-~~~-gv~~~~~~-g~---~~~~~~~~~-~~~~~~f~~d-~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 245 CVDRGGWLWSS-SGT-GVCVFDSD-GQ---LLGHIPTPG-TASNCTFDQA-QQRLFITGGPC-LWMLP 303 (305)
T ss_dssp EECTTSCEEEC-CSS-EEEEECTT-SC---EEEEEECSS-CCCEEEECTT-SCEEEEEETTE-EEEEE
T ss_pred EECCCCCEEEe-cCC-cEEEECCC-CC---EEEEEECCC-ceeEEEEeCC-CCEEEEEcCCe-EEEEE
Confidence 89999995544 444 49999974 33 334444343 5889999984 44455555554 43334
No 208
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.27 E-value=3.7e-09 Score=97.39 Aligned_cols=189 Identities=12% Similarity=0.068 Sum_probs=133.4
Q ss_pred CCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCC
Q psy2107 168 GKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGD 247 (391)
Q Consensus 168 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~ 247 (391)
+.+.++++...+++|.++|.. +.+.+..+.. ...+..+.|+|+++++++++.|+.|.+||+....
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~----t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t---------- 229 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGS----TYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKE---------- 229 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETT----TCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSS----------
T ss_pred CCceEEEEeCCCCeEEEEECC----CCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCC----------
Confidence 455677888889999999943 3345555553 3457799999999999999999999999995111
Q ss_pred CCccccccccccccCCCCCceeeecCccCcccEEEec----cCC-eEEEEE-CCCeEEEEecccCceeEEEECCe-----
Q psy2107 248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT----AVD-EIITSS-WDHTLKIWDAELGGMKSEIVGNK----- 316 (391)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~----- 316 (391)
.+.+..+.... ....++|+ |++ ++++++ .++.+.++|..+.+.+..+....
T Consensus 230 -----------------~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~ 291 (567)
T 1qks_A 230 -----------------PTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDE 291 (567)
T ss_dssp -----------------CCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTT
T ss_pred -----------------CcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccccccc
Confidence 23444454322 34688999 455 555554 56999999999999988876432
Q ss_pred -------eeEEEEECCCCCE-EEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107 317 -------SFFDVHYSPLSKL-VITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW 388 (391)
Q Consensus 317 -------~i~~~~~~p~~~~-l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw 388 (391)
.+..+..++++.. ++....+|.|.++|....+... +..+ ........+.|+|++.++++++..++.|.++
T Consensus 292 ~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~-v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~Vi 369 (567)
T 1qks_A 292 QEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLK-TTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVI 369 (567)
T ss_dssp CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEE-EEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEE
T ss_pred ccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccce-eeee-eccccccCceECCCCCEEEEEeCCCCeEEEE
Confidence 4667888888664 4455567999999987654222 2222 2344577899999666666666678899999
Q ss_pred ecC
Q psy2107 389 DLR 391 (391)
Q Consensus 389 dlr 391 (391)
|++
T Consensus 370 D~~ 372 (567)
T 1qks_A 370 DTK 372 (567)
T ss_dssp ETT
T ss_pred ECC
Confidence 974
No 209
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.26 E-value=3e-09 Score=94.42 Aligned_cols=194 Identities=12% Similarity=0.133 Sum_probs=129.2
Q ss_pred CCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC--cEEEEEC
Q psy2107 156 GPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC--LLKIWSA 233 (391)
Q Consensus 156 ~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg--~i~iwd~ 233 (391)
.....|+| ++++.++++...++.|++||.. ... ....... ..... ++|+++++.|+++..++ .|.+|+.
T Consensus 131 ~~P~~la~---d~~g~lyv~d~~~~~I~~id~~--~g~--~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~ 201 (409)
T 3hrp_A 131 KYMWGIAA---VGNNTVLAYQRDDPRVRLISVD--DNK--VTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMK 201 (409)
T ss_dssp CCEEEEEE---CSTTEEEEEETTTTEEEEEETT--TTE--EEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEG
T ss_pred CCceEEEE---eCCCCEEEEecCCCcEEEEECC--CCE--EEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEc
Confidence 35678888 7788888888888999999943 322 2222232 23334 99999999999888866 6888887
Q ss_pred CCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC-ccCcccEEEecc-CCeEEEEECCCeEEEEecccCceeEE
Q psy2107 234 DISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG-HKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMKSE 311 (391)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~ 311 (391)
..+... ..+..+.. ....+.++++++ ++.|+.+..++.|+.||..++.....
T Consensus 202 ~~~~~~--------------------------~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 202 ASGWAP--------------------------TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp GGTTCE--------------------------EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred CCCcee--------------------------EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 542210 00101111 345677899997 78888888889999999987764322
Q ss_pred ----EECCeee--E-EEEECCC-CCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc---------------cCcEEEEEE
Q psy2107 312 ----IVGNKSF--F-DVHYSPL-SKLVITASADKQIRLYDPKVKEGAIVKSTFSSH---------------KEWVQSVRW 368 (391)
Q Consensus 312 ----~~~~~~i--~-~~~~~p~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h---------------~~~v~~~~~ 368 (391)
....... . .++|+|+ +.++++-..++.|+.|+.... ...+.++ -.....+++
T Consensus 256 ~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~ 330 (409)
T 3hrp_A 256 KQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-----CEWFCGSATQKTVQDGLREEALFAQPNGMTV 330 (409)
T ss_dssp EECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEE
T ss_pred ecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-----EEEEEeCCCCCCcCCCcccccEeCCCeEEEE
Confidence 1111112 2 8999995 566666667889999997542 1122222 245899999
Q ss_pred CCCCCCEEEEee-CCCcEEEEec
Q psy2107 369 SPIDPQLFVSAS-FDNSVKLWDL 390 (391)
Q Consensus 369 ~~~~~~~l~s~~-~dg~v~iwdl 390 (391)
+| ++.++++-. .++.|+.||+
T Consensus 331 d~-dG~lyvad~~~~~~I~~~~~ 352 (409)
T 3hrp_A 331 DE-DGNFYIVDGFKGYCLRKLDI 352 (409)
T ss_dssp CT-TCCEEEEETTTTCEEEEEET
T ss_pred eC-CCCEEEEeCCCCCEEEEEEC
Confidence 99 556788877 8899999984
No 210
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.25 E-value=1.3e-09 Score=104.82 Aligned_cols=199 Identities=11% Similarity=0.080 Sum_probs=125.2
Q ss_pred CCCCeeEEEEEecCCCCeEEEEEeCC-----CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCc-
Q psy2107 154 HGGPVKGVAWLYNDGKDAAFISVSTD-----QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCL- 227 (391)
Q Consensus 154 ~~~~v~~l~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~- 227 (391)
|...+..++| +|++++|+.++.+ ..|++||+. ++..... .. +...+..++|+|+ +.|+.++.++.
T Consensus 161 ~~~~~~~~~~---SPDG~~la~~~~~~G~e~~~i~v~dl~--tg~~~~~-~~--~~~~~~~~~wspD-~~l~~~~~~~~~ 231 (741)
T 1yr2_A 161 GATALDAWAA---SDDGRLLAYSVQDGGSDWRTVKFVGVA--DGKPLAD-EL--KWVKFSGLAWLGN-DALLYSRFAEPK 231 (741)
T ss_dssp --EEEEEEEE---CTTSSEEEEEEEETTCSEEEEEEEETT--TCCEEEE-EE--EEEESCCCEESTT-SEEEEEECCCC-
T ss_pred CCEEEEeEEE---CCCCCEEEEEEcCCCCceEEEEEEECC--CCCCCCc-cC--CCceeccEEEECC-CEEEEEEecCcc
Confidence 3346788999 7889988877654 359999965 3332211 11 1122357899999 98988887654
Q ss_pred -------------EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEE
Q psy2107 228 -------------LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSS 293 (391)
Q Consensus 228 -------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~ 293 (391)
|++|++.++... ...+.....+...+..+.|++++. |+..+
T Consensus 232 ~~~~~~~~~~~~~v~~~~lgt~~~~-------------------------~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~ 286 (741)
T 1yr2_A 232 EGQAFQALNYNQTVWLHRLGTPQSA-------------------------DQPVFATPELPKRGHGASVSSDGRWVVITS 286 (741)
T ss_dssp -------CCCCCEEEEEETTSCGGG-------------------------CEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred cccccccCCCCCEEEEEECCCCchh-------------------------CEEEeccCCCCeEEEEEEECCCCCEEEEEE
Confidence 888888653310 011222223334578899997764 66555
Q ss_pred CC-----CeEEEEecccC--ceeEEEECC-eeeEEEEECCCCCEEEEeeCC----CcEEEEcCCCCCcceEEEEeccccC
Q psy2107 294 WD-----HTLKIWDAELG--GMKSEIVGN-KSFFDVHYSPLSKLVITASAD----KQIRLYDPKVKEGAIVKSTFSSHKE 361 (391)
Q Consensus 294 ~d-----g~i~iwd~~~~--~~~~~~~~~-~~i~~~~~~p~~~~l~~g~~d----g~i~iwd~~~~~~~~~~~~~~~h~~ 361 (391)
.+ ..|++||+.++ .....+..+ ...... ++|+|+.|+..+.+ +.|.+||+.... ......+..+..
T Consensus 287 ~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~ 364 (741)
T 1yr2_A 287 SEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVVPESKD 364 (741)
T ss_dssp ECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-CEEEEEECCCSS
T ss_pred EccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-cccEEEecCCCC
Confidence 43 38999999877 413444433 333333 34889988877653 459999987632 123334455556
Q ss_pred cEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 362 WVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 362 ~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
.+..++|+ ++.++++...|+..+||.+
T Consensus 365 ~l~~~~~~--~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 365 NLESVGIA--GNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp EEEEEEEE--BTEEEEEEEETTEEEEEEE
T ss_pred eEEEEEEE--CCEEEEEEEECCEEEEEEE
Confidence 67778887 5568899999998888753
No 211
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.25 E-value=7.5e-10 Score=95.89 Aligned_cols=254 Identities=9% Similarity=0.017 Sum_probs=152.1
Q ss_pred cCCEEEEEEC-----CCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEe----------CCCcEEEEeec
Q psy2107 125 HNDWILTGCY-----DHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVS----------TDQTAMIWEWK 188 (391)
Q Consensus 125 ~~~~l~t~~~-----dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~----------~dg~v~iwd~~ 188 (391)
+++.+++... ++.|.+.|.. .+.+..+..-..+ . +++ ++++++++.+. .++.|.+||..
T Consensus 43 d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~---spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 43 DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVV---ADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEE---CTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEE---CCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 3555555544 6799999995 4555566544444 3 888 77888776665 36789999954
Q ss_pred CCCCceeEEEEEecC-------CCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCCCCCCCCCCCCC----------
Q psy2107 189 VESNSIECIHVCRGH-------ERGLETVTVSESRQQFATGGW--DCLLKIWSADISKERGDPSENGDEG---------- 249 (391)
Q Consensus 189 ~~~~~~~~~~~~~~~-------~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~~~---------- 249 (391)
..+.+..+.-. ......++++|+|++++++.. ++.|.++|+.+.+........+...
T Consensus 118 ----t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~ 193 (386)
T 3sjl_D 118 ----TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFF 193 (386)
T ss_dssp ----TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEE
T ss_pred ----CCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeE
Confidence 33444444321 124567999999999988864 6899999999887654432211100
Q ss_pred ccccccccccccCCC-CCceeeecCc----cCccc-EEEec-cCCeEEEEECCCeEEEEecccCc--eeEEEEC------
Q psy2107 250 TTSKKRKKEYSSASS-RTPLITLKGH----KEAIS-AVQWT-AVDEIITSSWDHTLKIWDAELGG--MKSEIVG------ 314 (391)
Q Consensus 250 ~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~v~-~~~~~-~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~------ 314 (391)
..+......+..... .+.......+ ..++. ...|. +++.++..+.+|.|.+.|+..+. ....+..
T Consensus 194 ~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~ 273 (386)
T 3sjl_D 194 MHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAER 273 (386)
T ss_dssp EEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHH
T ss_pred EECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccc
Confidence 000000111111111 1221111111 11221 24554 67777668889999999997654 3333320
Q ss_pred -----CeeeEEEEECCCCCEEEEeeC----------CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEE-EE
Q psy2107 315 -----NKSFFDVHYSPLSKLVITASA----------DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLF-VS 378 (391)
Q Consensus 315 -----~~~i~~~~~~p~~~~l~~g~~----------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l-~s 378 (391)
......++++|+++.+..... .+.|.++|+.+.+ .+..+.- ...+.+|++++++..+| ++
T Consensus 274 ~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k---v~~~i~v-g~~~~~lavs~D~~~~ly~t 349 (386)
T 3sjl_D 274 ADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE---RLAKFEM-GHEIDSINVSQDEKPLLYAL 349 (386)
T ss_dssp HTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---EEEEEEE-EEEECEEEECSSSSCEEEEE
T ss_pred cccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe---EEEEEEC-CCCcceEEECCCCCeEEEEE
Confidence 112345777899887776542 2579999998876 5555442 23688999999665344 44
Q ss_pred eeCCCcEEEEecC
Q psy2107 379 ASFDNSVKLWDLR 391 (391)
Q Consensus 379 ~~~dg~v~iwdlr 391 (391)
...++.|.++|..
T Consensus 350 n~~~~~VsViD~~ 362 (386)
T 3sjl_D 350 STGDKTLYIHDAE 362 (386)
T ss_dssp ETTTTEEEEEETT
T ss_pred cCCCCeEEEEECC
Confidence 5668999999963
No 212
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.19 E-value=5.2e-09 Score=89.52 Aligned_cols=198 Identities=8% Similarity=0.083 Sum_probs=128.9
Q ss_pred CCCcEEEEEecC--CEEEEEECCCeEEEEcCCCceEEec-cC-----CCCCeeEEEEEecCCCCeEEEEEeCC-------
Q psy2107 115 HDDWVSAIDFHN--DWILTGCYDHSVHIWTRRGEHKLNI-PG-----HGGPVKGVAWLYNDGKDAAFISVSTD------- 179 (391)
Q Consensus 115 h~~~V~~~~~~~--~~l~t~~~dg~i~iwd~~~~~~~~~-~~-----~~~~v~~l~~~~~~~~~~~l~s~~~d------- 179 (391)
+...+.++++++ ..+..++..+.|.+||.+ .....+ .. ....+.++++ ++++.+.++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~---d~~g~l~v~~~~~~~~~~~~ 144 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAF---DYEGNLWITAPAGEVAPADY 144 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEE---CTTSCEEEEECBCBCTTSCC
T ss_pred CCCCCceEEEecCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEE---CCCCCEEEEecCcccccccc
Confidence 445688999973 466666666689999988 444433 21 1235789999 7788877766554
Q ss_pred --------CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEc----CCCCEEEEE-eCCCcEEEEECC-CCCCCCCCCCC
Q psy2107 180 --------QTAMIWEWKVESNSIECIHVCRGHERGLETVTVS----ESRQQFATG-GWDCLLKIWSAD-ISKERGDPSEN 245 (391)
Q Consensus 180 --------g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~----~~~~~l~sg-~~dg~i~iwd~~-~~~~~~~~~~~ 245 (391)
+.|..|+ .. ..... +..+......++++ |+++.++.+ ..++.|.+||.+ .++..
T Consensus 145 ~~~~~~~~~~l~~~~--~~-g~~~~---~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~------ 212 (314)
T 1pjx_A 145 TRSMQEKFGSIYCFT--TD-GQMIQ---VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIE------ 212 (314)
T ss_dssp CBTTSSSCEEEEEEC--TT-SCEEE---EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEE------
T ss_pred cccccCCCCeEEEEC--CC-CCEEE---eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccc------
Confidence 4555555 32 22222 22233456889999 999765554 567899999975 21110
Q ss_pred CCCCccccccccccccCCCCCceeeecCcc-CcccEEEeccCCeEEEE-ECCCeEEEEecccCceeEEEECC-eeeEEEE
Q psy2107 246 GDEGTTSKKRKKEYSSASSRTPLITLKGHK-EAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKSEIVGN-KSFFDVH 322 (391)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~-~~i~~~~ 322 (391)
.......+..+. ..+..+++++++.++.+ ..++.|.+||..+++....+..+ ..+.+++
T Consensus 213 ------------------~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~ 274 (314)
T 1pjx_A 213 ------------------NKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLH 274 (314)
T ss_dssp ------------------EEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEE
T ss_pred ------------------cceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEE
Confidence 001122233333 45678899977765555 46889999999878877777665 5788999
Q ss_pred ECCCCCEEE-EeeCCCcEEEEcCCC
Q psy2107 323 YSPLSKLVI-TASADKQIRLYDPKV 346 (391)
Q Consensus 323 ~~p~~~~l~-~g~~dg~i~iwd~~~ 346 (391)
++|+++.|. +...++.|..|++..
T Consensus 275 ~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 275 FKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp ECTTSSEEEEEETTTTEEEEEECSS
T ss_pred ECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 999999554 445567899999764
No 213
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.17 E-value=2.2e-11 Score=106.85 Aligned_cols=200 Identities=12% Similarity=0.068 Sum_probs=111.0
Q ss_pred EecCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe
Q psy2107 123 DFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR 201 (391)
Q Consensus 123 ~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 201 (391)
+..++.+++++.||.|+.||. +++.+.++.. +.+.+..+ ..++..+++++.||.|+.||..... .+..+.
T Consensus 6 ~v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~---~~~g~~~v~~s~dg~l~a~d~~tG~----~~w~~~ 76 (369)
T 2hz6_A 6 TLPETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPT---HVEEPAFLPDPNDGSLYTLGSKNNE----GLTKLP 76 (369)
T ss_dssp --CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC--------CCEEECTTTCCEEEC-----C----CSEECS
T ss_pred eeeCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecce---EcCCCEEEEeCCCCEEEEEECCCCc----eeeeee
Confidence 346889999999999999998 6777777665 44554444 3356677888899999999964222 222222
Q ss_pred cCCC-CeE-EEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCccc
Q psy2107 202 GHER-GLE-TVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAIS 279 (391)
Q Consensus 202 ~~~~-~v~-~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 279 (391)
.+.. .+. +..+. .+..+++|+.|+.|+.||.++++... .+..+..
T Consensus 77 ~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w-----------------------------~~~~~~~--- 123 (369)
T 2hz6_A 77 FTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQ-----------------------------TLSSAFA--- 123 (369)
T ss_dssp CCHHHHHTTCSCC------CCCCEEEEEEEEECCC---------------------------------------------
T ss_pred ccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEE-----------------------------EecCCCc---
Confidence 2211 010 00111 34467888899999999998866532 1111110
Q ss_pred EEEec-cCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCC---CEEEEeeCCCcEEEEcCCCCCcceEEEE
Q psy2107 280 AVQWT-AVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLS---KLVITASADKQIRLYDPKVKEGAIVKST 355 (391)
Q Consensus 280 ~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~---~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 355 (391)
..++ .++.+++++.|+.|+.||.++|+.+..+.... ....++.++. ..+++++.+|.|+.||.++++ .+..
T Consensus 124 -~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~---~~W~ 198 (369)
T 2hz6_A 124 -DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD-YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD---VLWI 198 (369)
T ss_dssp ----------EEEEEEEEEEECCCSSSSSCCCEEEEEE-ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC---EEEE
T ss_pred -ccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-ccCccccCCccccceEEEECCCCEEEEEECCCCc---EEEE
Confidence 1122 45678899999999999999999877665322 2223344432 567778889999999998876 4444
Q ss_pred eccccCcEEE-EEECC
Q psy2107 356 FSSHKEWVQS-VRWSP 370 (391)
Q Consensus 356 ~~~h~~~v~~-~~~~~ 370 (391)
.. ...++.. ..+++
T Consensus 199 ~~-~~~pv~~~~~~~~ 213 (369)
T 2hz6_A 199 QN-YASPVVAFYVWQR 213 (369)
T ss_dssp EE-CSSCEEEEEECTT
T ss_pred ec-CCCceEEEEEecC
Confidence 43 3344443 34444
No 214
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.12 E-value=1.7e-11 Score=107.45 Aligned_cols=180 Identities=11% Similarity=0.020 Sum_probs=92.9
Q ss_pred CCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC
Q psy2107 169 KDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDE 248 (391)
Q Consensus 169 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~ 248 (391)
++..+++++.||.|..||.. +.+.+..+.. +.+.+..+..++..+++++.||.|+.||..+++...
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~----tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w-------- 73 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKR----TGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLT-------- 73 (369)
T ss_dssp CTTEEEEEETTSEEEEEETT----TCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSE--------
T ss_pred eCCEEEEEcCCCEEEEEECC----CCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceee--------
Confidence 46688999999999999954 3345555554 455555566677778888899999999997755421
Q ss_pred CccccccccccccCCCCCceeeecCcc-Cccc-EEEeccCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCC
Q psy2107 249 GTTSKKRKKEYSSASSRTPLITLKGHK-EAIS-AVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPL 326 (391)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~-~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~ 326 (391)
.+..+. ..+. +..+..++.+++++.|+.++.||.++|+.+..+..+.. ..++|+
T Consensus 74 ---------------------~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~ 129 (369)
T 2hz6_A 74 ---------------------KLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPS 129 (369)
T ss_dssp ---------------------ECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC----------------------
T ss_pred ---------------------eeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc---cccccc
Confidence 111110 0010 11112346788888999999999999999887766542 345678
Q ss_pred CCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCC--CCEEEEeeCCCcEEEEecC
Q psy2107 327 SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPID--PQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 327 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s~~~dg~v~iwdlr 391 (391)
+..+++++.|+.|+.||.++++ .+..+..+. ....++.++. ...++.++.||.|+.||.+
T Consensus 130 ~~~v~~~~~dg~v~a~d~~tG~---~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~ 191 (369)
T 2hz6_A 130 TSLLYLGRTEYTITMYDTKTRE---LRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSE 191 (369)
T ss_dssp ---EEEEEEEEEEECCCSSSSS---CCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTT
T ss_pred CCEEEEEecCCEEEEEECCCCC---EEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECC
Confidence 8899999999999999998765 222221111 1222333311 0346678889999999863
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.11 E-value=2.4e-07 Score=78.50 Aligned_cols=199 Identities=9% Similarity=0.035 Sum_probs=124.7
Q ss_pred CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q psy2107 154 HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSA 233 (391)
Q Consensus 154 ~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~ 233 (391)
...-..+..|.|. ++.++++...++.|..||.. .... ..+. ....+.+++++++++++++ . ++.|.+||.
T Consensus 11 ~~~~~Egp~w~~~--~~~l~~~d~~~~~i~~~d~~--~~~~---~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~ 80 (297)
T 3g4e_A 11 NCRCGESPVWEEV--SNSLLFVDIPAKKVCRWDSF--TKQV---QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNW 80 (297)
T ss_dssp CCSBEEEEEEETT--TTEEEEEETTTTEEEEEETT--TCCE---EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEET
T ss_pred CCccccCCeEECC--CCEEEEEECCCCEEEEEECC--CCcE---EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEEC
Confidence 3344567888542 56677887888999999954 3222 2222 3567999999999995554 4 567999998
Q ss_pred CCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec--CccCcccEEEeccCCeEEEEECC----------CeEEEE
Q psy2107 234 DISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK--GHKEAISAVQWTAVDEIITSSWD----------HTLKIW 301 (391)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~l~s~~~d----------g~i~iw 301 (391)
++++.. .+.... .....+..+++++++.++.++.. ..-.+|
T Consensus 81 ~~g~~~---------------------------~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~ 133 (297)
T 3g4e_A 81 KEQSAV---------------------------VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALY 133 (297)
T ss_dssp TTTEEE---------------------------EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEE
T ss_pred CCCcEE---------------------------EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEE
Confidence 763321 111111 11234678899987877666521 233455
Q ss_pred eccc-CceeEEEECCeeeEEEEECCCCCEEE-EeeCCCcEEEEcCC--CCCc--ceEEEEeccccCcEEEEEECCCCCCE
Q psy2107 302 DAEL-GGMKSEIVGNKSFFDVHYSPLSKLVI-TASADKQIRLYDPK--VKEG--AIVKSTFSSHKEWVQSVRWSPIDPQL 375 (391)
Q Consensus 302 d~~~-~~~~~~~~~~~~i~~~~~~p~~~~l~-~g~~dg~i~iwd~~--~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~ 375 (391)
.+.. ++.............++|+|+++.|+ +.+.++.|.+|++. ++.. ......+..+...+..+++++ ++++
T Consensus 134 ~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~-~G~l 212 (297)
T 3g4e_A 134 SLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA-EGKL 212 (297)
T ss_dssp EECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT-TSCE
T ss_pred EEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC-CCCE
Confidence 4432 33333333223567899999998664 55567899999874 3321 112233344456789999999 5577
Q ss_pred EEEeeCCCcEEEEec
Q psy2107 376 FVSASFDNSVKLWDL 390 (391)
Q Consensus 376 l~s~~~dg~v~iwdl 390 (391)
.++...++.|.+||.
T Consensus 213 wva~~~~~~v~~~d~ 227 (297)
T 3g4e_A 213 WVACYNGGRVIRLDP 227 (297)
T ss_dssp EEEEETTTEEEEECT
T ss_pred EEEEcCCCEEEEEcC
Confidence 787777888999985
No 216
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.10 E-value=3.8e-09 Score=93.16 Aligned_cols=243 Identities=7% Similarity=-0.016 Sum_probs=141.5
Q ss_pred CeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEe----------CCCcEEEEeecCCCCceeEEEEEecC-
Q psy2107 136 HSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVS----------TDQTAMIWEWKVESNSIECIHVCRGH- 203 (391)
Q Consensus 136 g~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~~~~~- 203 (391)
+.|.++|.. .+.+..+..-..+ .+.+ +++++.++.+. .++.|.++|.. ..+.+..+.-.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~---SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~----t~~vv~~I~v~g 169 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVA---AEDGSFFAQASTVFERIARGKRTDYVEVFDPV----TFLPIADIELPD 169 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEE---CTTSSCEEEEEEEEEETTEEEEEEEEEEECTT----TCCEEEEEEETT
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEE---CCCCCEEEEEeccccccccCCCCCEEEEEECC----CCcEEEEEECCC
Confidence 699999994 4555555543444 7899 77888777665 46789999944 33444444311
Q ss_pred ------CCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCCCCCCCCCCCCCccc-c---------ccccccccCCCC
Q psy2107 204 ------ERGLETVTVSESRQQFATGGW--DCLLKIWSADISKERGDPSENGDEGTTS-K---------KRKKEYSSASSR 265 (391)
Q Consensus 204 ------~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~ 265 (391)
......++++|++++++++.. ++.|.+.|+.+.+............... . .....+......
T Consensus 170 ~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~ 249 (426)
T 3c75_H 170 APRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADG 249 (426)
T ss_dssp CCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTT
T ss_pred ccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCC
Confidence 123567899999999998874 5789999999877644322211000000 0 000000011111
Q ss_pred Ccee----eecCccCcc-cEEEecc-CCeEEEEECCCeEEEEecccCcee--EEEECC-----------eeeEEEEECCC
Q psy2107 266 TPLI----TLKGHKEAI-SAVQWTA-VDEIITSSWDHTLKIWDAELGGMK--SEIVGN-----------KSFFDVHYSPL 326 (391)
Q Consensus 266 ~~~~----~~~~~~~~v-~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~-----------~~i~~~~~~p~ 326 (391)
+... .+.....++ ..+.+.+ ++.++..+..+.+.+.|+...... ..+... .....++++|+
T Consensus 250 ~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~d 329 (426)
T 3c75_H 250 ETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQ 329 (426)
T ss_dssp CCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGG
T ss_pred cEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCC
Confidence 1110 011011111 1234553 345666677889999998654422 111110 11223689999
Q ss_pred CCEEEEeeC----------CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEee-CCCcEEEEecC
Q psy2107 327 SKLVITASA----------DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDLR 391 (391)
Q Consensus 327 ~~~l~~g~~----------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwdlr 391 (391)
++.+++... ++.|.++|+.+.+ .+..+..- ....+++|+|++..+++++. .++.|.|+|+.
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~k---vv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~ 401 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGE---RINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAA 401 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---EEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCe---EEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECC
Confidence 887666532 3579999998877 55555422 24889999996552666666 69999999974
No 217
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.09 E-value=3.4e-08 Score=85.01 Aligned_cols=216 Identities=9% Similarity=-0.041 Sum_probs=144.0
Q ss_pred cCCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCC
Q psy2107 125 HNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHE 204 (391)
Q Consensus 125 ~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 204 (391)
.+..+..++.++.|..+|..+............+.++.. .+++. +..++.++.|..+|.. ......+....
T Consensus 106 ~~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~---~~~g~-l~vgt~~~~l~~~d~~-----g~~~~~~~~~~ 176 (330)
T 3hxj_A 106 FEDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYATPIV---SEDGT-IYVGSNDNYLYAINPD-----GTEKWRFKTND 176 (330)
T ss_dssp ETTEEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEE---CTTSC-EEEECTTSEEEEECTT-----SCEEEEEECSS
T ss_pred ECCEEEEEecCCEEEEEcCCCCEEEEEcCCCceeeeeEE---cCCCE-EEEEcCCCEEEEECCC-----CCEeEEEecCC
Confidence 377888899999999999886666655555555666666 44554 6667788999999832 23344444455
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec
Q psy2107 205 RGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT 284 (391)
Q Consensus 205 ~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 284 (391)
..+.++...+++.+++ ++ +.|..+| .+++ ...........+.++...
T Consensus 177 ~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~-----------------------------~~~~~~~~~~~~~~~~~~ 223 (330)
T 3hxj_A 177 AITSAASIGKDGTIYF-GS--DKVYAIN-PDGT-----------------------------EKWNFYAGYWTVTRPAIS 223 (330)
T ss_dssp CCCSCCEECTTCCEEE-ES--SSEEEEC-TTSC-----------------------------EEEEECCSSCCCSCCEEC
T ss_pred CceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCc-----------------------------EEEEEccCCcceeceEEC
Confidence 6677888878887544 44 7888898 4422 222333334567788888
Q ss_pred cCCeEEEEECCCeEEEEecccCceeEEEECCee-eEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcE
Q psy2107 285 AVDEIITSSWDHTLKIWDAELGGMKSEIVGNKS-FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWV 363 (391)
Q Consensus 285 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v 363 (391)
+++.++.++.++.+..+| .++..+..+..... +..+.+.+++ .|..++.+|.|..+|. +++ ....+......+
T Consensus 224 ~~g~l~v~t~~~gl~~~~-~~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~---~~~~~~~~~~~~ 297 (330)
T 3hxj_A 224 EDGTIYVTSLDGHLYAIN-PDGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGT---EKWNFETGSWII 297 (330)
T ss_dssp TTSCEEEEETTTEEEEEC-TTSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSC---EEEEEECSSCCC
T ss_pred CCCeEEEEcCCCeEEEEC-CCCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCc---EEEEEEcCCccc
Confidence 778899999999999997 45666666654442 3345555555 4556777888999995 333 333343345567
Q ss_pred EEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 364 QSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 364 ~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
.++...+ ++. |..++.+|.+++...
T Consensus 298 ~~~~~d~-~g~-l~~gt~~G~~~~~~~ 322 (330)
T 3hxj_A 298 ATPVIDE-NGT-IYFGTRNGKFYALFN 322 (330)
T ss_dssp SCCEECT-TCC-EEEECTTSCEEEEEC
T ss_pred cceEEcC-CCE-EEEEcCCCeEEEEec
Confidence 7777766 555 566888999988654
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.08 E-value=1.8e-08 Score=85.83 Aligned_cols=205 Identities=11% Similarity=0.044 Sum_probs=126.9
Q ss_pred CceEEeccCCCCCeeEEEEEecCCCCe-EEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe
Q psy2107 145 GEHKLNIPGHGGPVKGVAWLYNDGKDA-AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG 223 (391)
Q Consensus 145 ~~~~~~~~~~~~~v~~l~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~ 223 (391)
+..+..+...........|. ++++ +++++..++.|..|+. ... ...+..+...+..++++++|+++++..
T Consensus 34 ~~~~~~l~~~~~~~egp~~~---~~g~~l~~~d~~~~~i~~~~~---~g~---~~~~~~~~~~~~gl~~d~dG~l~v~~~ 104 (305)
T 3dr2_A 34 DARLLTLYDQATWSEGPAWW---EAQRTLVWSDLVGRRVLGWRE---DGT---VDVLLDATAFTNGNAVDAQQRLVHCEH 104 (305)
T ss_dssp TCCCEEEECCCSSEEEEEEE---GGGTEEEEEETTTTEEEEEET---TSC---EEEEEESCSCEEEEEECTTSCEEEEET
T ss_pred CCceEEEecCCcCccCCeEe---CCCCEEEEEECCCCEEEEEeC---CCC---EEEEeCCCCccceeeECCCCCEEEEEC
Confidence 33444455556667789994 4565 7777788899999983 222 233444567789999999999766665
Q ss_pred CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC-ccCcccEEEeccCCeEEEE-----EC---
Q psy2107 224 WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG-HKEAISAVQWTAVDEIITS-----SW--- 294 (391)
Q Consensus 224 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~l~s~-----~~--- 294 (391)
.++.|..|+.+ ++.. .......+ ....+..+++.+++.++.+ ..
T Consensus 105 ~~~~v~~~~~~-g~~~--------------------------~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~ 157 (305)
T 3dr2_A 105 GRRAITRSDAD-GQAH--------------------------LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPS 157 (305)
T ss_dssp TTTEEEEECTT-SCEE--------------------------EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGG
T ss_pred CCCEEEEECCC-CCEE--------------------------EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccc
Confidence 66789999874 2210 00001111 1234677899987776663 21
Q ss_pred ----------CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCC------CcEEEEcCCCCCcceEEEEe-c
Q psy2107 295 ----------DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD------KQIRLYDPKVKEGAIVKSTF-S 357 (391)
Q Consensus 295 ----------dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d------g~i~iwd~~~~~~~~~~~~~-~ 357 (391)
.+.|..||..+++..... .......++|+|+++.|+.+... +.|++|++.... ......+ .
T Consensus 158 ~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~ 235 (305)
T 3dr2_A 158 QGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFAS 235 (305)
T ss_dssp GSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEEC
T ss_pred cccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEE
Confidence 256888887777654433 22356789999999977776654 689999976432 1011111 1
Q ss_pred cccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 358 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 358 ~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
.....+..+++++ ++++.++. .+ .|.+||.
T Consensus 236 ~~~~~pdgi~~d~-~G~lwv~~-~~-gv~~~~~ 265 (305)
T 3dr2_A 236 VPDGLPDGFCVDR-GGWLWSSS-GT-GVCVFDS 265 (305)
T ss_dssp CSSSCCCSEEECT-TSCEEECC-SS-EEEEECT
T ss_pred CCCCCCCeEEECC-CCCEEEec-CC-cEEEECC
Confidence 1234456788998 55544444 44 4888874
No 219
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.06 E-value=1.9e-08 Score=87.27 Aligned_cols=245 Identities=10% Similarity=-0.076 Sum_probs=142.1
Q ss_pred EEEEEECCC----eEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEe----------CCCcEEEEeecCCCC
Q psy2107 128 WILTGCYDH----SVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVS----------TDQTAMIWEWKVESN 192 (391)
Q Consensus 128 ~l~t~~~dg----~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~ 192 (391)
.+++...++ +|.++|. +.+.+.++..-..+ .+.+ ++++++++.+. .++.|.+||..
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~---spDg~~lyVan~~~~r~~~G~~~~~VsviD~~---- 104 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVA---GHSGSDFALASTSFARSAKGKRTDYVEVFDPV---- 104 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEE---CTTSSCEEEEEEEETTTTSSSEEEEEEEECTT----
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEE---CCCCCEEEEEcccccccccCCCCCEEEEEECC----
Confidence 344444444 8889999 45556666544445 6899 77888777775 37889999954
Q ss_pred ceeEEEEEecC-------CCCeEEEEEcCCCCEEEEEeC--CCcEEE--EECCCCCCCCCCCCCCCCCcccccccc----
Q psy2107 193 SIECIHVCRGH-------ERGLETVTVSESRQQFATGGW--DCLLKI--WSADISKERGDPSENGDEGTTSKKRKK---- 257 (391)
Q Consensus 193 ~~~~~~~~~~~-------~~~v~~l~~~~~~~~l~sg~~--dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~---- 257 (391)
..+.+..+... ......++++|+|++++++.. +..+.+ +|..+-+...... . ...........
T Consensus 105 T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~-~-~~~~p~g~~~~~~~~ 182 (368)
T 1mda_H 105 TFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSAS-C-FHIHPGAAATHYLGS 182 (368)
T ss_dssp TCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSS-C-CCCEEEETTEEECCC
T ss_pred CCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCC-c-eEEccCCCeEEEEEc
Confidence 34455555432 124568999999999998874 467888 8886511110000 0 00000000000
Q ss_pred -----ccccCCC-----CCce----eeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCc--eeEEEECC------
Q psy2107 258 -----EYSSASS-----RTPL----ITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGG--MKSEIVGN------ 315 (391)
Q Consensus 258 -----~~~~~~~-----~~~~----~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~------ 315 (391)
...+... .+.. ..+.....+. .+.+++.++..+. +.+.+.|+.... .+..+...
T Consensus 183 ~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~ 258 (368)
T 1mda_H 183 CPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKA 258 (368)
T ss_dssp CTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHH
T ss_pred CCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccc
Confidence 0000000 0000 0011111222 2445566666666 899999986543 22222110
Q ss_pred -----eeeEEEEECCCCCEEEEeeC---------CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEee-
Q psy2107 316 -----KSFFDVHYSPLSKLVITASA---------DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS- 380 (391)
Q Consensus 316 -----~~i~~~~~~p~~~~l~~g~~---------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~- 380 (391)
.....++++|+++.++++.. ++.+.++|+.+.+ .+..+.... ....++|+|++..++++..
T Consensus 259 ~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~---vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~ 334 (368)
T 1mda_H 259 DNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ---TSGPISNGH-DSDAIIAAQDGASDNYANSA 334 (368)
T ss_dssp TTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC---EEECCEEEE-EECEEEECCSSSCEEEEEET
T ss_pred cccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe---EEEEEECCC-CcceEEECCCCCEEEEEccC
Confidence 11122689999988776533 2356699998876 555554333 5899999997666888888
Q ss_pred CCCcEEEEecC
Q psy2107 381 FDNSVKLWDLR 391 (391)
Q Consensus 381 ~dg~v~iwdlr 391 (391)
.++.|.++|++
T Consensus 335 ~~~~VsVID~~ 345 (368)
T 1mda_H 335 GTEVLDIYDAA 345 (368)
T ss_dssp TTTEEEEEESS
T ss_pred CCCeEEEEECC
Confidence 69999999974
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.04 E-value=1.3e-07 Score=81.30 Aligned_cols=193 Identities=8% Similarity=-0.060 Sum_probs=119.9
Q ss_pred eeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy2107 158 VKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISK 237 (391)
Q Consensus 158 v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~ 237 (391)
..+..|.|. .+.++++...++.|..||.. .... ..+. ....+.+++++++++++++. .+ .|.+||..+++
T Consensus 51 ~egp~~~~~--~~~l~~~d~~~~~i~~~d~~--~~~~---~~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~ 120 (326)
T 2ghs_A 51 GEGPTFDPA--SGTAWWFNILERELHELHLA--SGRK---TVHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGV 120 (326)
T ss_dssp EEEEEEETT--TTEEEEEEGGGTEEEEEETT--TTEE---EEEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCC
T ss_pred CcCCeEeCC--CCEEEEEECCCCEEEEEECC--CCcE---EEEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCc
Confidence 456788442 35677777788999999843 3222 2222 34679999999999866654 44 49999986643
Q ss_pred CCCCCCCCCCCCccccccccccccCCCCCceeeec--CccCcccEEEeccCCeEEEEECC-------CeEEEEecccCce
Q psy2107 238 ERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK--GHKEAISAVQWTAVDEIITSSWD-------HTLKIWDAELGGM 308 (391)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~l~s~~~d-------g~i~iwd~~~~~~ 308 (391)
.. .+.... .....+..+.+++++.++.++.+ +.|..++ +++.
T Consensus 121 ~~---------------------------~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~ 171 (326)
T 2ghs_A 121 LT---------------------------LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV 171 (326)
T ss_dssp EE---------------------------EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE
T ss_pred EE---------------------------EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE
Confidence 21 011110 11235778999987776666532 4555555 4544
Q ss_pred eEEEECCeeeEEEEECCCCCEEEEe-eCCCcEEEEcCC--CC-C--cceEEEEeccccCcEEEEEECCCCCCEEEEeeCC
Q psy2107 309 KSEIVGNKSFFDVHYSPLSKLVITA-SADKQIRLYDPK--VK-E--GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD 382 (391)
Q Consensus 309 ~~~~~~~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~--~~-~--~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 382 (391)
............++|+|+++.++.+ +.++.|.+|++. ++ . .......+......+..+++++ ++.+.++...+
T Consensus 172 ~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~-~G~lwva~~~~ 250 (326)
T 2ghs_A 172 TKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNARWGE 250 (326)
T ss_dssp EEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEEETT
T ss_pred EEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECC-CCCEEEEEeCC
Confidence 3322222345689999999876544 457899999975 33 2 1122233333445678999998 55667766667
Q ss_pred CcEEEEec
Q psy2107 383 NSVKLWDL 390 (391)
Q Consensus 383 g~v~iwdl 390 (391)
+.|.+||.
T Consensus 251 ~~v~~~d~ 258 (326)
T 2ghs_A 251 GAVDRYDT 258 (326)
T ss_dssp TEEEEECT
T ss_pred CEEEEECC
Confidence 88998874
No 221
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.03 E-value=1.7e-07 Score=81.24 Aligned_cols=254 Identities=9% Similarity=0.020 Sum_probs=138.9
Q ss_pred CcEEEEEec--CCEEEEEE--CCCeEEEEcCCCceEEecc-------CCCCCeeEEEEEecCCCCeEEEEEeC-----CC
Q psy2107 117 DWVSAIDFH--NDWILTGC--YDHSVHIWTRRGEHKLNIP-------GHGGPVKGVAWLYNDGKDAAFISVST-----DQ 180 (391)
Q Consensus 117 ~~V~~~~~~--~~~l~t~~--~dg~i~iwd~~~~~~~~~~-------~~~~~v~~l~~~~~~~~~~~l~s~~~-----dg 180 (391)
.....++++ |+++++.. .++.++||.++...+..+. .+-..+..+++ ++++.++++-.. ++
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~---d~~g~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKS---DGNGIVWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEE---CSSSEEEEEECHHHHTSCC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEE---cCCCcEEEEcCCCCcCCCC
Confidence 467788887 56777753 2343455544233333332 34567899999 777776665443 57
Q ss_pred cEEEEeecCCCCceeEEEEEec------CCCCeEEEEEcCCCCEE-EEEe---CCCcEEEEECCCCCCCCCCCC--CCCC
Q psy2107 181 TAMIWEWKVESNSIECIHVCRG------HERGLETVTVSESRQQF-ATGG---WDCLLKIWSADISKERGDPSE--NGDE 248 (391)
Q Consensus 181 ~v~iwd~~~~~~~~~~~~~~~~------~~~~v~~l~~~~~~~~l-~sg~---~dg~i~iwd~~~~~~~~~~~~--~~~~ 248 (391)
.|.+||+. +. +.+..+.. +...+..+++++++..+ ++.. .++.|.+||+.+++....... ....
T Consensus 94 ~i~~~d~~--tg--~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~ 169 (343)
T 2qe8_A 94 KLVAWDTL--NN--QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAP 169 (343)
T ss_dssp EEEEEETT--TT--EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSC
T ss_pred eEEEEECC--CC--eEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccc
Confidence 89999954 22 33333332 22356899999865444 5544 578999999986553221100 0000
Q ss_pred C-ccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCC-eEEEEecc---cCc--------eeEEEEC
Q psy2107 249 G-TTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDH-TLKIWDAE---LGG--------MKSEIVG 314 (391)
Q Consensus 249 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg-~i~iwd~~---~~~--------~~~~~~~ 314 (391)
. .........+.......... .....+..++|++++ .|+.+..++ .+..++.. .+. .+.....
T Consensus 170 ~~~~~~~~g~~~~~~~~~g~~~---~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~ 246 (343)
T 2qe8_A 170 EDIDLVIDGVPVQIGQPDGTVI---RPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSE 246 (343)
T ss_dssp CSCCCEETTEECBEECTTSCEE---CCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEE
T ss_pred cccceeECCEEEEeccCCCcee---ceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEeccc
Confidence 0 00000000000000000000 011245789999776 477776655 45444432 111 0111111
Q ss_pred CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec-cccCcEEEEEECCCCCCEEEEeeCCCc
Q psy2107 315 NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS-SHKEWVQSVRWSPIDPQLFVSASFDNS 384 (391)
Q Consensus 315 ~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~dg~ 384 (391)
......++++++|.++++...++.|.+||...++ ...... .+...+.+++|.+ ++.++++.+..+.
T Consensus 247 ~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~---~~~~~~~~~~~~p~~va~~~-~g~l~v~~~~~~~ 313 (343)
T 2qe8_A 247 KPICDGISIDKDHNIYVGDLAHSAIGVITSADRA---YKLLVTDEKLSWTDSFNFGS-DGYLYFDCNQLHH 313 (343)
T ss_dssp CCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE---EEEEEECGGGSCEEEEEECT-TSCEEEEECCGGG
T ss_pred CCCCceEEECCCCCEEEEccCCCeEEEEECCCCC---EEEEEECCceecCCeeEECC-CCcEEEEeCcccc
Confidence 2245578999999999998889999999984433 221221 2345689999999 5667777664433
No 222
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.96 E-value=9.8e-07 Score=76.50 Aligned_cols=234 Identities=10% Similarity=-0.011 Sum_probs=134.8
Q ss_pred EEec--CCEEEEEE----------CCCeEEEEcCC-CceEEeccCC-------CCCeeEEEEEecCCCCeEEEEEeC--C
Q psy2107 122 IDFH--NDWILTGC----------YDHSVHIWTRR-GEHKLNIPGH-------GGPVKGVAWLYNDGKDAAFISVST--D 179 (391)
Q Consensus 122 ~~~~--~~~l~t~~----------~dg~i~iwd~~-~~~~~~~~~~-------~~~v~~l~~~~~~~~~~~l~s~~~--d 179 (391)
++++ +++++++. .++.|.+||.. .+.+..+.-. ...-..+.| ++++++++.+.. +
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~---spDGk~lyVan~~~~ 159 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSL---TPDGKTLLFYQFSPA 159 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEE---CTTSSEEEEEECSSS
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEE---cCCCCEEEEEEcCCC
Confidence 6666 66665554 36789999994 4444444311 124567889 888998887764 6
Q ss_pred CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC-CCCCC----CCCCCCCCCcc-c-
Q psy2107 180 QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADI-SKERG----DPSENGDEGTT-S- 252 (391)
Q Consensus 180 g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~-~~~~~----~~~~~~~~~~~-~- 252 (391)
+.|.++|.. ..+.+..+.... . ...+....+.+++.+.||.+.+.++.. ++... ........... .
T Consensus 160 ~~VsVID~~----t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~ 232 (386)
T 3sjl_D 160 PAVGVVDLE----GKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPA 232 (386)
T ss_dssp CEEEEEETT----TTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCE
T ss_pred CeEEEEECC----CCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccce
Confidence 899999954 335555554211 1 122322445666777788888888765 33310 00000000000 0
Q ss_pred --cccccccccCCCCCceeeecC-----------------------ccCcccEEEec-cCCeEEEEEC----------CC
Q psy2107 253 --KKRKKEYSSASSRTPLITLKG-----------------------HKEAISAVQWT-AVDEIITSSW----------DH 296 (391)
Q Consensus 253 --~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~v~~~~~~-~~~~l~s~~~----------dg 296 (391)
......++..... .+..+.. .......++++ +.++++.... ..
T Consensus 233 ~~~~dG~~~~vs~~g-~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~ 311 (386)
T 3sjl_D 233 YSQKAGRLVWPTYTG-KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASR 311 (386)
T ss_dssp EETTTTEEEEEBTTS-EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEE
T ss_pred eEcCCCcEEEEeCCC-EEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCC
Confidence 0011111111100 1111110 01223446667 3456666543 25
Q ss_pred eEEEEecccCceeEEEECCeeeEEEEECCCCC-EEEEe-eCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECC
Q psy2107 297 TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSK-LVITA-SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP 370 (391)
Q Consensus 297 ~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~-~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 370 (391)
.|.+.|+.+++.+..+.....+..++++++++ +|+++ ..++.|.++|..+++ .+..+..- +..+.|.+++
T Consensus 312 ~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k---~~~~i~~~-~~p~~l~~s~ 383 (386)
T 3sjl_D 312 FVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE---ELRSVNQL-GHGPQVITTA 383 (386)
T ss_dssp EEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC---EEEEECCC-CSSCCEEEEC
T ss_pred EEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc---EEEEecCC-CCCceeEECC
Confidence 79999999999999999888999999999997 66664 458999999998876 55555422 2234555555
No 223
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.96 E-value=8.5e-07 Score=77.86 Aligned_cols=233 Identities=8% Similarity=-0.008 Sum_probs=135.4
Q ss_pred EEEEecCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEE
Q psy2107 120 SAIDFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIH 198 (391)
Q Consensus 120 ~~~~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 198 (391)
..+...++.++.++.++.|..+|. +++.+............... .+..++.++.++.|..+|.. +.+.+.
T Consensus 97 ~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~-----~~~~v~v~~~~g~l~~~d~~----tG~~~W 167 (376)
T 3q7m_A 97 GGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV-----SDGLVLIHTSNGQLQALNEA----DGAVKW 167 (376)
T ss_dssp EEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE-----ETTEEEEECTTSEEEEEETT----TCCEEE
T ss_pred cCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE-----ECCEEEEEcCCCeEEEEECC----CCcEEE
Confidence 445556888999999999999998 56666655433322222222 23467778889999999953 233344
Q ss_pred EEecCCCCe-----EEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC
Q psy2107 199 VCRGHERGL-----ETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG 273 (391)
Q Consensus 199 ~~~~~~~~v-----~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (391)
......... ...... +..++.++.++.+..+|..+++.......... ........+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~---------------~~~~~~~~~~- 229 (376)
T 3q7m_A 168 TVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQA---------------TGSTEIDRLS- 229 (376)
T ss_dssp EEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC---------------------------
T ss_pred EEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccC---------------CCCccccccc-
Confidence 433221111 112222 34688888899999999987554211000000 0000000000
Q ss_pred ccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEE
Q psy2107 274 HKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVK 353 (391)
Q Consensus 274 ~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 353 (391)
.+.......++.++.++.++.+..+|.++++.+....... ...+.. ++..+..++.++.+..+|..+++ ..
T Consensus 230 ---~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~-~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~---~~ 300 (376)
T 3q7m_A 230 ---DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS-VNDFIV--DGNRIYLVDQNDRVMALTIDGGV---TL 300 (376)
T ss_dssp ---CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC-EEEEEE--ETTEEEEEETTCCEEEEETTTCC---EE
T ss_pred ---ccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC-CCCceE--ECCEEEEEcCCCeEEEEECCCCc---EE
Confidence 0000001125788888999999999999999887765433 333333 36677788889999999998776 43
Q ss_pred EEec-cccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 354 STFS-SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 354 ~~~~-~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
.... .....+...... ++ .|+.++.+|.|.++|.+
T Consensus 301 w~~~~~~~~~~~~~~~~--~~-~l~v~~~~g~l~~~d~~ 336 (376)
T 3q7m_A 301 WTQSDLLHRLLTSPVLY--NG-NLVVGDSEGYLHWINVE 336 (376)
T ss_dssp EEECTTTTSCCCCCEEE--TT-EEEEECTTSEEEEEETT
T ss_pred EeecccCCCcccCCEEE--CC-EEEEEeCCCeEEEEECC
Confidence 3333 112222333332 33 57778889999999853
No 224
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.95 E-value=1.6e-06 Score=75.75 Aligned_cols=204 Identities=8% Similarity=-0.039 Sum_probs=119.9
Q ss_pred EEEEec--CCEEEEEEC--CCeEEEEcCCCceEEec-cCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCce
Q psy2107 120 SAIDFH--NDWILTGCY--DHSVHIWTRRGEHKLNI-PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSI 194 (391)
Q Consensus 120 ~~~~~~--~~~l~t~~~--dg~i~iwd~~~~~~~~~-~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 194 (391)
..++++ |++|+++.. ++.|.++| ....+... ....+. +.+.|. ....+++.+.||.+.+++. ... ..
T Consensus 128 ~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~--~~~~~~~~~~dg~~~~vd~-~g~-~~ 199 (373)
T 2mad_H 128 WMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPG--APSTFYLLCAQGGLAKTDH-AGG-AA 199 (373)
T ss_pred cceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeC--CCceEEEEcCCCCEEEEEC-CCc-EE
Confidence 356665 778888764 57899999 76555433 333332 444443 2345677788999999995 221 11
Q ss_pred eEEE--EEecCCCC-eEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee
Q psy2107 195 ECIH--VCRGHERG-LETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL 271 (391)
Q Consensus 195 ~~~~--~~~~~~~~-v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (391)
.... .......+ .....+.+++..++..+..+.+.+.|+......... .+ ....... ...
T Consensus 200 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~---------------~~-~~~~~~~-~~~ 262 (373)
T 2mad_H 200 GAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKA---------------PI-DALSGGR-KAD 262 (373)
T ss_pred EEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEee---------------ee-eecCCcc-ccc
Confidence 0111 00011112 123456666555555557789999998653210000 00 0000000 000
Q ss_pred cCccCcccEEEeccC-CeEEEEEC----------CCeEEEEecccCceeEEEECCeeeEEEEECCCCC-EEEEee-CCCc
Q psy2107 272 KGHKEAISAVQWTAV-DEIITSSW----------DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSK-LVITAS-ADKQ 338 (391)
Q Consensus 272 ~~~~~~v~~~~~~~~-~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~-~l~~g~-~dg~ 338 (391)
.........+.++++ ++++.+.. .+.|.++|+.+++.+.++........++|+|+|+ +++++. .++.
T Consensus 263 ~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~ 342 (373)
T 2mad_H 263 TWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEV 342 (373)
T ss_pred ceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCe
Confidence 001122334677754 45665543 3589999999999999998877889999999999 777776 5899
Q ss_pred EEEEcCCCCC
Q psy2107 339 IRLYDPKVKE 348 (391)
Q Consensus 339 i~iwd~~~~~ 348 (391)
|.+||+.+.+
T Consensus 343 V~ViD~~t~~ 352 (373)
T 2mad_H 343 LHIYDAGAGD 352 (373)
T ss_pred EEEEECCCCC
Confidence 9999998866
No 225
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.93 E-value=2.7e-07 Score=80.65 Aligned_cols=192 Identities=13% Similarity=0.106 Sum_probs=123.6
Q ss_pred CCCe-EEEEEeCCCcEEEEeecCCCCceeEEEEEe-------cCCCCeEEEEEcCCCCEEEEEeCC------CcEEEEEC
Q psy2107 168 GKDA-AFISVSTDQTAMIWEWKVESNSIECIHVCR-------GHERGLETVTVSESRQQFATGGWD------CLLKIWSA 233 (391)
Q Consensus 168 ~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-------~~~~~v~~l~~~~~~~~l~sg~~d------g~i~iwd~ 233 (391)
.+.+ +++++..+++|.++|+.......+...++. .....-..+...|+| +++++..+ |.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 3444 555677789999999754444556666662 111234567888999 66666555 78999998
Q ss_pred CCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCcc---CcccEEEeccCCe-EEEEE----------------
Q psy2107 234 DISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHK---EAISAVQWTAVDE-IITSS---------------- 293 (391)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~-l~s~~---------------- 293 (391)
++.+ .+..+.... .--..+.|+|++. +++..
T Consensus 172 ~T~~-----------------------------v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~ 222 (462)
T 2ece_A 172 YSFE-----------------------------PLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHL 222 (462)
T ss_dssp TTCC-----------------------------EEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTH
T ss_pred CCCe-----------------------------EEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhh
Confidence 7744 333333111 1123567776554 44443
Q ss_pred ---CCCeEEEEecccCceeEEEECC---eeeEEEEE--CCCCCEEEEee------CCCcEEEEcCCCCCcceEEEE--ec
Q psy2107 294 ---WDHTLKIWDAELGGMKSEIVGN---KSFFDVHY--SPLSKLVITAS------ADKQIRLYDPKVKEGAIVKST--FS 357 (391)
Q Consensus 294 ---~dg~i~iwd~~~~~~~~~~~~~---~~i~~~~~--~p~~~~l~~g~------~dg~i~iwd~~~~~~~~~~~~--~~ 357 (391)
.+.+|.+||+.+++.+.++... .....+.| +|+++++.+++ .++.|.+|....+. ...... +.
T Consensus 223 ~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~-~~~~~vIdi~ 301 (462)
T 2ece_A 223 KDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK-WNAEKVIEIP 301 (462)
T ss_dssp HHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE-EEEEEEEEEC
T ss_pred hhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc-eeEEEEEeCC
Confidence 3789999999999888888874 24445545 99999888776 45688776654321 111111 11
Q ss_pred cc----------------cCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 358 SH----------------KEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 358 ~h----------------~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
.. ...+..+.++||+..++++.-..+.|.++|+
T Consensus 302 ~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV 350 (462)
T 2ece_A 302 AEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDI 350 (462)
T ss_dssp CEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEEC
T ss_pred CccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 10 2457889999977777777777899999986
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.92 E-value=1e-07 Score=90.21 Aligned_cols=227 Identities=11% Similarity=0.076 Sum_probs=141.3
Q ss_pred EEecCCEEEEEECCCeEEEEcC-CCceEEeccCC-C----CCeeE-EEEEecCCCCeEEEEEeC------CCcEEEEeec
Q psy2107 122 IDFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGH-G----GPVKG-VAWLYNDGKDAAFISVST------DQTAMIWEWK 188 (391)
Q Consensus 122 ~~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~-~----~~v~~-l~~~~~~~~~~~l~s~~~------dg~v~iwd~~ 188 (391)
+++.++.++.++.|+.|..+|. +++.+..+... . ..+.+ ... .++ .++.++. +|.|+.+|..
T Consensus 124 ~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v----~~~-~v~v~~~~~~~~~~g~v~a~D~~ 198 (677)
T 1kb0_A 124 VALWKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV----FKG-KVIIGNGGAEYGVRGYITAYDAE 198 (677)
T ss_dssp CEEETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE----ETT-EEEECCBCTTTCCBCEEEEEETT
T ss_pred ceEECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE----ECC-EEEEEecccccCCCCEEEEEECC
Confidence 4556888999999999999999 67777766543 1 12221 111 133 3444442 7899999954
Q ss_pred CCCCceeEEEEEecCCC--------------------------------CeEEEEEcCCCCEEEEEeCCC----------
Q psy2107 189 VESNSIECIHVCRGHER--------------------------------GLETVTVSESRQQFATGGWDC---------- 226 (391)
Q Consensus 189 ~~~~~~~~~~~~~~~~~--------------------------------~v~~l~~~~~~~~l~sg~~dg---------- 226 (391)
+.+.+..+..... ....++++|++..++.+..++
T Consensus 199 ----tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~ 274 (677)
T 1kb0_A 199 ----TGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSP 274 (677)
T ss_dssp ----TCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHST
T ss_pred ----CCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCc
Confidence 3344444432111 113578889888888887664
Q ss_pred ---------cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC--cc-------CcccEEEec-cC-
Q psy2107 227 ---------LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG--HK-------EAISAVQWT-AV- 286 (391)
Q Consensus 227 ---------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~v~~~~~~-~~- 286 (391)
.|..+|.++++.. ..+.. |. .....+... ++
T Consensus 275 ~~gd~~~~~sv~AlD~~TG~~~-----------------------------W~~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 275 KGGDNLYLASIVALDPDTGKYK-----------------------------WHYQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp TCCCCTTTTEEEEECTTTCCEE-----------------------------EEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred cCCCCeeeEEEEEEECCCCCEE-----------------------------EEEecCCCcccccccCCCcEEEecccCCc
Confidence 4777887775532 22111 11 111111221 22
Q ss_pred --CeEEEEECCCeEEEEecccCceeEEEECCe------------ee------------------------EEEEECCCCC
Q psy2107 287 --DEIITSSWDHTLKIWDAELGGMKSEIVGNK------------SF------------------------FDVHYSPLSK 328 (391)
Q Consensus 287 --~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------~i------------------------~~~~~~p~~~ 328 (391)
..++.++.+|.++++|..+|+.+..+.... ++ ..++++|++.
T Consensus 326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~ 405 (677)
T 1kb0_A 326 PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG 405 (677)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT
T ss_pred EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC
Confidence 358888999999999999999987765321 11 1467889888
Q ss_pred EEEEeeC-------------------------------------------CCcEEEEcCCCCCcceEEEEeccccCcEEE
Q psy2107 329 LVITASA-------------------------------------------DKQIRLYDPKVKEGAIVKSTFSSHKEWVQS 365 (391)
Q Consensus 329 ~l~~g~~-------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~ 365 (391)
++++... .|.|..||+.+++ .+.... +..++..
T Consensus 406 ~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~---~~W~~~-~~~~~~~ 481 (677)
T 1kb0_A 406 LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQK---AAWSVE-HVSPWNG 481 (677)
T ss_dssp EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTE---EEEEEE-ESSSCCC
T ss_pred EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCc---EEeecC-CCCCCcC
Confidence 8777543 2779999998766 444443 3334445
Q ss_pred EEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 366 VRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 366 ~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
..+...+ .+++.++.||.+++||++
T Consensus 482 g~~~~~g-~~v~~g~~dg~l~a~D~~ 506 (677)
T 1kb0_A 482 GTLTTAG-NVVFQGTADGRLVAYHAA 506 (677)
T ss_dssp CEEEETT-TEEEEECTTSEEEEEETT
T ss_pred cceEeCC-CEEEEECCCCcEEEEECC
Confidence 5555534 467778999999999974
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.91 E-value=1.4e-07 Score=89.36 Aligned_cols=231 Identities=9% Similarity=0.035 Sum_probs=138.3
Q ss_pred EecCCEEEEEECCCeEEEEcC-CCceEEeccCC--CCCeeEEEEEecCCCCeEEEEEe-----CCCcEEEEeecCCCCce
Q psy2107 123 DFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGH--GGPVKGVAWLYNDGKDAAFISVS-----TDQTAMIWEWKVESNSI 194 (391)
Q Consensus 123 ~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~--~~~v~~l~~~~~~~~~~~l~s~~-----~dg~v~iwd~~~~~~~~ 194 (391)
++.++.++.++.||.|..+|. +++.+...... ......+...|.-.++..++..+ .+|.|..||.. +.
T Consensus 118 ~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~----tG 193 (689)
T 1yiq_A 118 AVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAE----TG 193 (689)
T ss_dssp EEETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETT----TC
T ss_pred EEECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECC----CC
Confidence 456788999999999999998 67777655432 11111111101001344443322 37899999954 23
Q ss_pred eEEEEEecC-------------------------------CCCeEEEEEcCCCCEEEEEeCCCc----------------
Q psy2107 195 ECIHVCRGH-------------------------------ERGLETVTVSESRQQFATGGWDCL---------------- 227 (391)
Q Consensus 195 ~~~~~~~~~-------------------------------~~~v~~l~~~~~~~~l~sg~~dg~---------------- 227 (391)
+.+..+... ......++++|+..+++.++.++.
T Consensus 194 ~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y 273 (689)
T 1yiq_A 194 KEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLF 273 (689)
T ss_dssp CEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTT
T ss_pred cEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCcee
Confidence 344444310 011135788998888998887764
Q ss_pred ---EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC--cc-------CcccEEEeccCC----eEEE
Q psy2107 228 ---LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG--HK-------EAISAVQWTAVD----EIIT 291 (391)
Q Consensus 228 ---i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~v~~~~~~~~~----~l~s 291 (391)
|..||.++++.. ..+.. |. .+........++ .++.
T Consensus 274 ~~~v~AlD~~TG~~~-----------------------------W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~ 324 (689)
T 1yiq_A 274 LSSIVAVNADTGEYV-----------------------------WHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQ 324 (689)
T ss_dssp TTEEEEEETTTCCEE-----------------------------EEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEE
T ss_pred eeeEEEEEccCCcee-----------------------------EeeecCCcccccccCCCCcEEEeeccCCcEEEEEEE
Confidence 888888876542 22211 11 111111111122 5788
Q ss_pred EECCCeEEEEecccCceeEEEECCe----------------------------------------eeEEEEECCCCCEEE
Q psy2107 292 SSWDHTLKIWDAELGGMKSEIVGNK----------------------------------------SFFDVHYSPLSKLVI 331 (391)
Q Consensus 292 ~~~dg~i~iwd~~~~~~~~~~~~~~----------------------------------------~i~~~~~~p~~~~l~ 331 (391)
++.+|.++++|.++|+.+....... ....++++|+..+++
T Consensus 325 ~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~y 404 (689)
T 1yiq_A 325 APKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVY 404 (689)
T ss_dssp CCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEE
T ss_pred ECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEE
Confidence 8999999999999999875443211 011267888877777
Q ss_pred EeeC---------------------------------------------CCcEEEEcCCCCCcceEEEEeccccCcEEEE
Q psy2107 332 TASA---------------------------------------------DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSV 366 (391)
Q Consensus 332 ~g~~---------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~ 366 (391)
+... +|.|+.||+.+++ .+.....+. ++...
T Consensus 405 v~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~---~~W~~~~~~-~~~~g 480 (689)
T 1yiq_A 405 IPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQ---AAWEVPYVT-IFNGG 480 (689)
T ss_dssp EEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTE---EEEEEEESS-SCCCC
T ss_pred EeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCC---eEeEccCCC-CccCc
Confidence 6532 3779999998876 544544333 23333
Q ss_pred EECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 367 RWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 367 ~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
.+.. .+.+++.++.||.++.||.+
T Consensus 481 ~~~t-agglvf~gt~dg~l~a~D~~ 504 (689)
T 1yiq_A 481 TLST-AGNLVFEGSADGRVIAYAAD 504 (689)
T ss_dssp EEEE-TTTEEEEECTTSEEEEEETT
T ss_pred cceE-CCCEEEEECCCCcEEEEECC
Confidence 4555 34578889999999999964
No 228
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.90 E-value=1.8e-06 Score=75.79 Aligned_cols=218 Identities=10% Similarity=-0.007 Sum_probs=132.6
Q ss_pred ecCCEEEEEECCCeEEEEcC-CCceEEeccCC---------CCCee-EEEEEecCCCCeEEEEEeCCCcEEEEeecCCCC
Q psy2107 124 FHNDWILTGCYDHSVHIWTR-RGEHKLNIPGH---------GGPVK-GVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN 192 (391)
Q Consensus 124 ~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~---------~~~v~-~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 192 (391)
..++.+++++.++.|..+|. +++.+...... ...+. .+.. .+..++.++.++.|..+|..
T Consensus 51 v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~v~~~~g~l~a~d~~---- 121 (376)
T 3q7m_A 51 LADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-----SGGHVYIGSEKAQVYALNTS---- 121 (376)
T ss_dssp EETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-----ETTEEEEEETTSEEEEEETT----
T ss_pred EECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE-----eCCEEEEEcCCCEEEEEECC----
Confidence 35788888999999999999 56666554432 12222 2222 34567778899999999943
Q ss_pred ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec
Q psy2107 193 SIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK 272 (391)
Q Consensus 193 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (391)
+.+.+................ +..++.++.++.|..+|..+++.. ....
T Consensus 122 tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~-----------------------------W~~~ 170 (376)
T 3q7m_A 122 DGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVK-----------------------------WTVN 170 (376)
T ss_dssp TCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEE-----------------------------EEEE
T ss_pred CCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEE-----------------------------EEEe
Confidence 233444444332222222222 347888889999999999876542 1111
Q ss_pred CccCc-----ccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCeee-----EE---EEECC--CCCEEEEeeCCC
Q psy2107 273 GHKEA-----ISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSF-----FD---VHYSP--LSKLVITASADK 337 (391)
Q Consensus 273 ~~~~~-----v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i-----~~---~~~~p--~~~~l~~g~~dg 337 (391)
..... ...... .++.++.++.++.+..+|..+++.+.......+. .. +...| .+..++.++.++
T Consensus 171 ~~~~~~~~~~~~~~~~-~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g 249 (376)
T 3q7m_A 171 LDMPSLSLRGESAPTT-AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNG 249 (376)
T ss_dssp CCC-----CCCCCCEE-ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTS
T ss_pred CCCCceeecCCCCcEE-ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCc
Confidence 11000 011111 2577888889999999999999988777644210 00 11112 256777778899
Q ss_pred cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 338 QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 338 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
.+..+|..+++ ...... ......+... ++ .+..++.+|.|..+|.
T Consensus 250 ~l~~~d~~tG~---~~w~~~--~~~~~~~~~~--~~-~l~~~~~~g~l~~~d~ 294 (376)
T 3q7m_A 250 NLTALDLRSGQ---IMWKRE--LGSVNDFIVD--GN-RIYLVDQNDRVMALTI 294 (376)
T ss_dssp CEEEEETTTCC---EEEEEC--CCCEEEEEEE--TT-EEEEEETTCCEEEEET
T ss_pred EEEEEECCCCc---EEeecc--CCCCCCceEE--CC-EEEEEcCCCeEEEEEC
Confidence 99999998766 333332 2234445443 33 5667778889988885
No 229
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.89 E-value=3.5e-06 Score=69.10 Aligned_cols=191 Identities=9% Similarity=0.012 Sum_probs=124.7
Q ss_pred eeEEEEEecCCCCeEEEEEeC--CCcEEEEeecCCCCceeEEEEEecC-CCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy2107 158 VKGVAWLYNDGKDAAFISVST--DQTAMIWEWKVESNSIECIHVCRGH-ERGLETVTVSESRQQFATGGWDCLLKIWSAD 234 (391)
Q Consensus 158 v~~l~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~ 234 (391)
...+.| ++++.++++.+. ++.|+++|+. + .+.+..+.-. ......+++.. +++.++.-.++.+.++|..
T Consensus 23 ~~Gl~~---~~dg~Lyvstg~~~~s~v~~iD~~--t--g~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~ 94 (266)
T 2iwa_A 23 TQGLVY---AENDTLFESTGLYGRSSVRQVALQ--T--GKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRR 94 (266)
T ss_dssp EEEEEE---CSTTEEEEEECSTTTCEEEEEETT--T--CCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETT
T ss_pred cccEEE---eCCCeEEEECCCCCCCEEEEEECC--C--CCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECC
Confidence 578999 666655555543 5799999954 3 3344444321 12234566653 2334444567899999997
Q ss_pred CCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEEC
Q psy2107 235 ISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG 314 (391)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 314 (391)
+.+ .+..+......-..++. +++.++++..++.|.++|..+.+....+..
T Consensus 95 t~~-----------------------------v~~~i~~g~~~g~glt~-Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 95 TLS-----------------------------NIKNFTHQMKDGWGLAT-DGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp TTE-----------------------------EEEEEECCSSSCCEEEE-CSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred CCc-----------------------------EEEEEECCCCCeEEEEE-CCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 633 34444321111233444 345566666789999999999998888774
Q ss_pred Ce------eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc-------------cCcEEEEEECCCCCCE
Q psy2107 315 NK------SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH-------------KEWVQSVRWSPIDPQL 375 (391)
Q Consensus 315 ~~------~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h-------------~~~v~~~~~~~~~~~~ 375 (391)
.. .++.+.|. +|...+....++.|.+.|+.+++ ++..+.-. ....+.++|+|++.++
T Consensus 145 g~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~---V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~l 220 (266)
T 2iwa_A 145 KYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGT---LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRI 220 (266)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCC---EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEE
T ss_pred CCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCc---EEEEEECCCcccccccccccccCceEEEEEcCCCCEE
Confidence 32 25677777 67655555567899999998877 55544321 1356999999977889
Q ss_pred EEEeeCCCcEEEEec
Q psy2107 376 FVSASFDNSVKLWDL 390 (391)
Q Consensus 376 l~s~~~dg~v~iwdl 390 (391)
++++...+.|.+-++
T Consensus 221 fVTgk~~~~v~~i~l 235 (266)
T 2iwa_A 221 FVTGKLWPKLFEIKL 235 (266)
T ss_dssp EEEETTCSEEEEEEE
T ss_pred EEECCCCCeEEEEEE
Confidence 999988899888775
No 230
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.87 E-value=3.3e-07 Score=86.70 Aligned_cols=81 Identities=12% Similarity=0.068 Sum_probs=58.6
Q ss_pred CeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec-cccCcEEEEEECCCCCC
Q psy2107 296 HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS-SHKEWVQSVRWSPIDPQ 374 (391)
Q Consensus 296 g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~ 374 (391)
|.|..||+.+++.+..+....+.....+...+.+++.++.||.+++||.++++ .+..+. ++.....-+.+.+++..
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~---~lw~~~~~~~~~~~p~~y~~~G~~ 533 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGE---KLWEAPTGTGVVAAPSTYMVDGRQ 533 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC---EEEEEECSSCCCSCCEEEEETTEE
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCc---eeeeeeCCCCcccCCEEEEeCCEE
Confidence 78999999999999888776655555666778888999999999999999877 555554 23222344556564555
Q ss_pred EEEEe
Q psy2107 375 LFVSA 379 (391)
Q Consensus 375 ~l~s~ 379 (391)
+++..
T Consensus 534 ~v~~~ 538 (677)
T 1kb0_A 534 YVSVA 538 (677)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 55553
No 231
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.87 E-value=7.9e-08 Score=91.61 Aligned_cols=199 Identities=10% Similarity=0.048 Sum_probs=118.4
Q ss_pred CCCCeeEEEEEecCCCCeEEEEE-----eCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCc-
Q psy2107 154 HGGPVKGVAWLYNDGKDAAFISV-----STDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCL- 227 (391)
Q Consensus 154 ~~~~v~~l~~~~~~~~~~~l~s~-----~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~- 227 (391)
|...+..++| +|++++||-+ +.+..|++||+. ++..... .+.. .....++|+ |++.|+.++.+..
T Consensus 127 ~~~~l~~~~~---SpDg~~lAy~~~~~G~~~~~i~v~dl~--tg~~~~~-~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~ 197 (693)
T 3iuj_A 127 GTTALDQLSF---SRDGRILAYSLSLAGSDWREIHLMDVE--SKQPLET-PLKD--VKFSGISWL-GNEGFFYSSYDKPD 197 (693)
T ss_dssp SCCEEEEEEE---CTTSSEEEEEEECSSCCEEEEEEEETT--TCSEEEE-EEEE--EESCCCEEE-TTTEEEEEESSCCC
T ss_pred CcEEEEEEEE---CCCCCEEEEEEecCCCceEEEEEEECC--CCCCCcc-ccCC--ceeccEEEe-CCCEEEEEEecCcc
Confidence 4556888899 7889888743 333578999965 3332211 2221 113567899 9999998887743
Q ss_pred ------------EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC-ccCcccEEEeccCCe-E-EEE
Q psy2107 228 ------------LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG-HKEAISAVQWTAVDE-I-ITS 292 (391)
Q Consensus 228 ------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~-l-~s~ 292 (391)
|++|++.+.... ...+..... |...+..+.|++++. | ++.
T Consensus 198 ~~~~~~~~~~~~v~~~~lgt~~~~-------------------------~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~ 252 (693)
T 3iuj_A 198 GSELSARTDQHKVYFHRLGTAQED-------------------------DRLVFGAIPAQHHRYVGATVTEDDRFLLISA 252 (693)
T ss_dssp -------CCCCEEEEEETTSCGGG-------------------------CEEEESCSGGGCCSEEEEEECTTSCEEEEEE
T ss_pred cccccccCCCcEEEEEECCCCccc-------------------------ceEEEecCCCCCeEEEEEEEcCCCCEEEEEE
Confidence 888988663320 112222233 444567888997765 4 333
Q ss_pred EC---CCeEEEEecccCc-eeEEEECCe-eeEEEEECCCCCEEEEee-C---CCcEEEEcCCCCCcceEEEEeccccCcE
Q psy2107 293 SW---DHTLKIWDAELGG-MKSEIVGNK-SFFDVHYSPLSKLVITAS-A---DKQIRLYDPKVKEGAIVKSTFSSHKEWV 363 (391)
Q Consensus 293 ~~---dg~i~iwd~~~~~-~~~~~~~~~-~i~~~~~~p~~~~l~~g~-~---dg~i~iwd~~~~~~~~~~~~~~~h~~~v 363 (391)
+. ...|+++|+.++. ....+..+. ..... ++++|..|+..+ . .+.|..+|+....... ...+..|...+
T Consensus 253 ~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~ 330 (693)
T 3iuj_A 253 ANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAH-WRDLIPERQQV 330 (693)
T ss_dssp ESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGG-CEEEECCCSSC
T ss_pred ccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccc-cEEEecCCCCE
Confidence 32 3589999998764 334444333 33333 666666555443 3 3679999987654211 12344555555
Q ss_pred EEEEECCCCCCEEEEeeCCC--cEEEEec
Q psy2107 364 QSVRWSPIDPQLFVSASFDN--SVKLWDL 390 (391)
Q Consensus 364 ~~~~~~~~~~~~l~s~~~dg--~v~iwdl 390 (391)
. .|++++..++++...+| .|++||+
T Consensus 331 ~--~~s~~g~~lv~~~~~~g~~~l~~~d~ 357 (693)
T 3iuj_A 331 L--TVHSGSGYLFAEYMVDATARVEQFDY 357 (693)
T ss_dssp E--EEEEETTEEEEEEEETTEEEEEEECT
T ss_pred E--EEEEECCEEEEEEEECCeeEEEEEEC
Confidence 5 78886655555555665 5788875
No 232
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.86 E-value=9.2e-08 Score=82.94 Aligned_cols=197 Identities=8% Similarity=-0.014 Sum_probs=125.8
Q ss_pred CCeeEEEEEecCCCCeEEEEEe--CCCcEEEEeecCCCCceeEEEEE-------ecCCCCeEEEEEcCCCCEEEEEeC--
Q psy2107 156 GPVKGVAWLYNDGKDAAFISVS--TDQTAMIWEWKVESNSIECIHVC-------RGHERGLETVTVSESRQQFATGGW-- 224 (391)
Q Consensus 156 ~~v~~l~~~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~-------~~~~~~v~~l~~~~~~~~l~sg~~-- 224 (391)
.....+++ +++++++++.. .++.+++|.+. ... +..+ ..+...+..++++++++++++-..
T Consensus 17 ~~p~~va~---~~~g~~~v~~~~~~~~~~~l~~~~--~g~---~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~ 88 (343)
T 2qe8_A 17 LAPGNITL---TPDGRLFLSLHQFYQPEMQVAELT--QDG---LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQ 88 (343)
T ss_dssp SCEEEEEE---CTTSCEEEEECGGGCCSCSEEEEE--TTE---EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHH
T ss_pred CCcceEEE---CCCCCEEEEeCCCCCCceEEEEEC--CCC---eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCC
Confidence 57888999 77888888864 23436677664 221 2222 134568999999999886665443
Q ss_pred ---CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec------CccCcccEEEecc-CCeEEEE-E
Q psy2107 225 ---DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK------GHKEAISAVQWTA-VDEIITS-S 293 (391)
Q Consensus 225 ---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~-~~~l~s~-~ 293 (391)
++.|.+||+.+++. +..+. .+...+..+++++ ++.++.+ .
T Consensus 89 ~~~~~~i~~~d~~tg~~-----------------------------~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~ 139 (343)
T 2qe8_A 89 SKSVPKLVAWDTLNNQL-----------------------------SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDP 139 (343)
T ss_dssp HTSCCEEEEEETTTTEE-----------------------------EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEEC
T ss_pred cCCCCeEEEEECCCCeE-----------------------------EEEEECChhhcccccccceEEEecCCCEEEEEcC
Confidence 57899999976442 11111 1234567889984 4665444 4
Q ss_pred ---CCCeEEEEecccCceeEEEECC------------------------------eeeEEEEECCCCCEEEEeeCCC-cE
Q psy2107 294 ---WDHTLKIWDAELGGMKSEIVGN------------------------------KSFFDVHYSPLSKLVITASADK-QI 339 (391)
Q Consensus 294 ---~dg~i~iwd~~~~~~~~~~~~~------------------------------~~i~~~~~~p~~~~l~~g~~dg-~i 339 (391)
.++.|.+||+.+++....+..+ ..+..++|+|+++.|+.+...+ .+
T Consensus 140 ~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l 219 (343)
T 2qe8_A 140 APDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSM 219 (343)
T ss_dssp CSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEE
T ss_pred ccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeE
Confidence 5789999999887765544221 1257899999999888876665 55
Q ss_pred EEEcCCC---CC--cceEE--EEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 340 RLYDPKV---KE--GAIVK--STFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 340 ~iwd~~~---~~--~~~~~--~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
+.++... .. ..... ....++......+++++ ++.++++...++.|.+||.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~-~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 220 YRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDK-DHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp EEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECT-TCCEEEEEGGGTEEEEEET
T ss_pred EEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECC-CCCEEEEccCCCeEEEEEC
Confidence 5554211 00 00000 01113444567899999 5678888888999999985
No 233
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.84 E-value=1.8e-07 Score=80.53 Aligned_cols=220 Identities=15% Similarity=0.036 Sum_probs=136.1
Q ss_pred cEEEEEec-CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeE
Q psy2107 118 WVSAIDFH-NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIEC 196 (391)
Q Consensus 118 ~V~~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 196 (391)
.+.++... ...+..++.+ |..+|.++.....+............ . +..+..++.++.+..+|.. ...
T Consensus 61 ~~~~~~~~~~g~l~v~t~~--l~~~d~~g~~~~~~~~~~~~~~~~~~---~--~~~l~v~t~~~~l~~~d~~-----g~~ 128 (330)
T 3hxj_A 61 IECRPSIGKDGTIYFGSDK--VYAINPDGTEKWRFDTKKAIVSDFTI---F--EDILYVTSMDGHLYAINTD-----GTE 128 (330)
T ss_dssp EEECCEETTTTEECCSSCE--EEEECCCGGGGGGSCC-----CCEEE---E--TTEEEEECTTSEEEEECTT-----SCE
T ss_pred cccceEEecCCcEEEecCc--EEEECCCCcEEEEEECCCCcccCceE---E--CCEEEEEecCCEEEEEcCC-----CCE
Confidence 45666665 5566666665 88888766555444433333333444 1 3457778889999999832 223
Q ss_pred EEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccC
Q psy2107 197 IHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKE 276 (391)
Q Consensus 197 ~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (391)
......+...+.++...+++. ++.++.++.|..+|.. ++ ..........
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~-----------------------------~~~~~~~~~~ 177 (330)
T 3hxj_A 129 KWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GT-----------------------------EKWRFKTNDA 177 (330)
T ss_dssp EEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SC-----------------------------EEEEEECSSC
T ss_pred EEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CC-----------------------------EeEEEecCCC
Confidence 444444555667777777776 6667788999999986 33 2222333344
Q ss_pred cccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEE
Q psy2107 277 AISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKST 355 (391)
Q Consensus 277 ~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 355 (391)
.+.++...+++.++.++ +.|..+| .+++........ ..+.++...++|.+. .++.++.+..+|.. +. ....
T Consensus 178 ~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~-v~t~~~gl~~~~~~-g~---~~~~ 249 (330)
T 3hxj_A 178 ITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIY-VTSLDGHLYAINPD-GT---EKWR 249 (330)
T ss_dssp CCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEE-EEETTTEEEEECTT-SC---EEEE
T ss_pred ceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEE-EEcCCCeEEEECCC-CC---EeEE
Confidence 56677776677777777 8899999 777777666544 357778888877544 45667888888743 22 2233
Q ss_pred eccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 356 FSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 356 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
+......+.++...+ ++. |..++.+|.|..+|.
T Consensus 250 ~~~~~~~~~~~~~~~-~g~-l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 250 FKTGKRIESSPVIGN-TDT-IYFGSYDGHLYAINP 282 (330)
T ss_dssp EECSSCCCSCCEECT-TSC-EEEECTTCEEEEECT
T ss_pred eeCCCCccccceEcC-CCe-EEEecCCCCEEEECC
Confidence 333333344556655 444 666777878887763
No 234
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.83 E-value=1.8e-06 Score=76.18 Aligned_cols=221 Identities=9% Similarity=-0.020 Sum_probs=125.0
Q ss_pred EEEec--CCEEEEEE----------CCCeEEEEcCC-CceEEeccCC-------CCCeeEEEEEecCCCCeEEEEEeC--
Q psy2107 121 AIDFH--NDWILTGC----------YDHSVHIWTRR-GEHKLNIPGH-------GGPVKGVAWLYNDGKDAAFISVST-- 178 (391)
Q Consensus 121 ~~~~~--~~~l~t~~----------~dg~i~iwd~~-~~~~~~~~~~-------~~~v~~l~~~~~~~~~~~l~s~~~-- 178 (391)
.++++ +++++++. .++.|.++|.. .+.+..+.-- ......+.| ++++++++.+..
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~---spDGk~lyV~n~~~ 198 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNAL---TPDNKNLLFYQFSP 198 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEE---CTTSSEEEEEECSS
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEE---cCCCCEEEEEecCC
Confidence 56776 56565554 46799999994 4444444311 233457888 888998888774
Q ss_pred CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCCCC----CCCCCCCCCc--c
Q psy2107 179 DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES-RQQFATGGWDCLLKIWSADISKERG----DPSENGDEGT--T 251 (391)
Q Consensus 179 dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~----~~~~~~~~~~--~ 251 (391)
++.|.+.|.. ..+.+..+.... . ....|+ .+.+++.+.||.+.+.+..+++... .......+.. .
T Consensus 199 ~~~VsVID~~----t~kvv~~I~v~g--~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~ 270 (426)
T 3c75_H 199 APAVGVVDLE----GKTFDRMLDVPD--C--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHP 270 (426)
T ss_dssp SCEEEEEETT----TTEEEEEEECCS--E--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCC
T ss_pred CCeEEEEECC----CCeEEEEEEcCC--c--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEe
Confidence 5789999954 334444544211 1 222232 2445555566666666664333220 0000000000 0
Q ss_pred --ccccccccccCCCCCceeeecC-----------------------ccCcccEEEeccC-CeEEEEEC----------C
Q psy2107 252 --SKKRKKEYSSASSRTPLITLKG-----------------------HKEAISAVQWTAV-DEIITSSW----------D 295 (391)
Q Consensus 252 --~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~v~~~~~~~~-~~l~s~~~----------d 295 (391)
.......+...... .+..+.. .......++++++ +++++... +
T Consensus 271 ~~~~dg~~~~~~s~~g-~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s 349 (426)
T 3c75_H 271 AFSLRSGRLVWPTYTG-KIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAAS 349 (426)
T ss_dssp EECTTTCEEEEEBTTS-EEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCE
T ss_pred eecCCCCEEEEEeCCC-cEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCC
Confidence 00000000000000 0000000 0111223677744 55655532 3
Q ss_pred CeEEEEecccCceeEEEECCeeeEEEEECCCCC-EEEEee-CCCcEEEEcCCCCCcceEEEEe
Q psy2107 296 HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSK-LVITAS-ADKQIRLYDPKVKEGAIVKSTF 356 (391)
Q Consensus 296 g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~-~l~~g~-~dg~i~iwd~~~~~~~~~~~~~ 356 (391)
+.|.++|+.+.+.+.++........++|+|+|+ ++++.. .++.|.++|+.+.+ .+..+
T Consensus 350 ~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k---vv~tI 409 (426)
T 3c75_H 350 RFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE---ELRSV 409 (426)
T ss_dssp EEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC---EEEEE
T ss_pred CEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC---EEEEe
Confidence 579999999999999998877889999999999 888877 58999999998877 55554
No 235
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.83 E-value=4.7e-07 Score=85.87 Aligned_cols=84 Identities=19% Similarity=0.095 Sum_probs=60.7
Q ss_pred CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc-cCcEEEEEECCCCC
Q psy2107 295 DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH-KEWVQSVRWSPIDP 373 (391)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~ 373 (391)
+|.|+.||+.+++.+..+..+.+...-.+...+.+++.|+.||.++.||.++++ .+..+... .....-+.|..++.
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~---~lw~~~~~~~~~~~p~ty~~~G~ 530 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGE---KLWEQPAASGVMAAPVTYSVDGE 530 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC---EEEEEECSSCCCSCCEEEEETTE
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCc---cceeeeCCCCcccCceEEEECCE
Confidence 478999999999999888776655544566678899999999999999999877 55555433 22224466666566
Q ss_pred CEEEEeeC
Q psy2107 374 QLFVSASF 381 (391)
Q Consensus 374 ~~l~s~~~ 381 (391)
++++..+.
T Consensus 531 qyv~~~~G 538 (689)
T 1yiq_A 531 QYVTFMAG 538 (689)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 66665543
No 236
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.82 E-value=1.9e-06 Score=75.48 Aligned_cols=215 Identities=12% Similarity=0.084 Sum_probs=127.3
Q ss_pred EEEEEECCCeEEEEcCCCc----eEE-ecc------CCC-CCeeEEEEEecCCCCeEEEEEeCC------CcEEEEeecC
Q psy2107 128 WILTGCYDHSVHIWTRRGE----HKL-NIP------GHG-GPVKGVAWLYNDGKDAAFISVSTD------QTAMIWEWKV 189 (391)
Q Consensus 128 ~l~t~~~dg~i~iwd~~~~----~~~-~~~------~~~-~~v~~l~~~~~~~~~~~l~s~~~d------g~v~iwd~~~ 189 (391)
+++++..++.|.|+|+... .+. .+. ... ..-..+.. .+++ +++++..+ |.|.+.|..
T Consensus 98 l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~---~pdG-i~Vs~~g~~~g~~~g~v~vlD~~- 172 (462)
T 2ece_A 98 LIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHC---GPDA-IYISALGNEEGEGPGGILMLDHY- 172 (462)
T ss_dssp EEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEE---CSSC-EEEEEEEETTSCSCCEEEEECTT-
T ss_pred EEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeE---CCCe-EEEEcCCCcCCCCCCeEEEEECC-
Confidence 5566677889999998422 222 331 111 12334455 5677 66666655 789999833
Q ss_pred CCCceeEEEEEecCCC---CeEEEEEcCCCCEEEEEe-------------------CCCcEEEEECCCCCCCCCCCCCCC
Q psy2107 190 ESNSIECIHVCRGHER---GLETVTVSESRQQFATGG-------------------WDCLLKIWSADISKERGDPSENGD 247 (391)
Q Consensus 190 ~~~~~~~~~~~~~~~~---~v~~l~~~~~~~~l~sg~-------------------~dg~i~iwd~~~~~~~~~~~~~~~ 247 (391)
+.+.+..+..... --..+.|+|+++.+++.. .+.+|.+||+.+.+
T Consensus 173 ---T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k---------- 239 (462)
T 2ece_A 173 ---SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK---------- 239 (462)
T ss_dssp ---TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE----------
T ss_pred ---CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc----------
Confidence 3455555542211 233577899999888874 36899999997632
Q ss_pred CCccccccccccccCCCCCceeeecCc--cCcccEEEe--ccCCe-EEEE-E-----CCCeEEEEecccCce--eEEE--
Q psy2107 248 EGTTSKKRKKEYSSASSRTPLITLKGH--KEAISAVQW--TAVDE-IITS-S-----WDHTLKIWDAELGGM--KSEI-- 312 (391)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~--~~~~~-l~s~-~-----~dg~i~iwd~~~~~~--~~~~-- 312 (391)
.+.++... ......+.| +|++. ++++ - .+++|.+|....+.. .+.+
T Consensus 240 -------------------~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi 300 (462)
T 2ece_A 240 -------------------RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEI 300 (462)
T ss_dssp -------------------EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEE
T ss_pred -------------------EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeC
Confidence 33334321 122344555 66654 4444 4 667888776654431 1111
Q ss_pred EC-----------------CeeeEEEEECCCCCEEEEeeC-CCcEEEEcCCCCCcceEEEEecccc--------------
Q psy2107 313 VG-----------------NKSFFDVHYSPLSKLVITASA-DKQIRLYDPKVKEGAIVKSTFSSHK-------------- 360 (391)
Q Consensus 313 ~~-----------------~~~i~~~~~~p~~~~l~~g~~-dg~i~iwd~~~~~~~~~~~~~~~h~-------------- 360 (391)
.. ......+.++|||++|.++.. .+.|.+||+.......++..+....
T Consensus 301 ~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ 380 (462)
T 2ece_A 301 PAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLT 380 (462)
T ss_dssp CCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCC
T ss_pred CCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCC
Confidence 11 123577899999998887764 6899999986443333444443220
Q ss_pred CcEEEEEECCCCCCEEEEe
Q psy2107 361 EWVQSVRWSPIDPQLFVSA 379 (391)
Q Consensus 361 ~~v~~~~~~~~~~~~l~s~ 379 (391)
+....++++|++.+++++.
T Consensus 381 ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 381 GAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SCCCCEEECTTSSEEEEEC
T ss_pred CCCCEEEEcCCCCEEEEEc
Confidence 1368899999665555544
No 237
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.71 E-value=1.3e-05 Score=64.93 Aligned_cols=183 Identities=13% Similarity=0.119 Sum_probs=115.4
Q ss_pred CCCCCe--eEEEEEecCCCCeEEEEEeCCC--cEEEEeecCCCCceeEEEEEecCCCC-eEEEEEcCCCCEEEEE-eCCC
Q psy2107 153 GHGGPV--KGVAWLYNDGKDAAFISVSTDQ--TAMIWEWKVESNSIECIHVCRGHERG-LETVTVSESRQQFATG-GWDC 226 (391)
Q Consensus 153 ~~~~~v--~~l~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~-v~~l~~~~~~~~l~sg-~~dg 226 (391)
.|...- ..+.| + ++.++.+.+.+| .|+++|+. + .+.+..+...... -..+++. +..|... -.++
T Consensus 38 phd~~~ftqGL~~---~-~~~LyestG~~g~S~v~~vD~~--T--gkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~ 107 (262)
T 3nol_A 38 PHDTKAFTEGFFY---R-NGYFYESTGLNGRSSIRKVDIE--S--GKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNG 107 (262)
T ss_dssp ECCTTCEEEEEEE---E-TTEEEEEEEETTEEEEEEECTT--T--CCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSS
T ss_pred cCCCCcccceEEE---E-CCEEEEECCCCCCceEEEEECC--C--CcEEEEEecCCccceeEEEEe--CCEEEEEEeeCC
Confidence 455443 67888 4 466777777776 89999854 3 3344444332221 1334443 4445444 4588
Q ss_pred cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccC
Q psy2107 227 LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELG 306 (391)
Q Consensus 227 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 306 (391)
.+.+||..+.+ .+.++..... -..+++. ++.|+.+..++.|.++|..+.
T Consensus 108 ~v~v~D~~t~~-----------------------------~~~ti~~~~e-G~glt~d-g~~L~~SdGs~~i~~iDp~T~ 156 (262)
T 3nol_A 108 LGFVWNIRNLR-----------------------------QVRSFNYDGE-GWGLTHN-DQYLIMSDGTPVLRFLDPESL 156 (262)
T ss_dssp EEEEEETTTCC-----------------------------EEEEEECSSC-CCCEEEC-SSCEEECCSSSEEEEECTTTC
T ss_pred EEEEEECccCc-----------------------------EEEEEECCCC-ceEEecC-CCEEEEECCCCeEEEEcCCCC
Confidence 99999997733 4445543221 1344443 455666666889999999999
Q ss_pred ceeEEEECC---ee---eEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc------------cCcEEEEEE
Q psy2107 307 GMKSEIVGN---KS---FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH------------KEWVQSVRW 368 (391)
Q Consensus 307 ~~~~~~~~~---~~---i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h------------~~~v~~~~~ 368 (391)
+.+.++... .+ ++.+.|. +|+..+..-.++.|.+.|+++++ +...+... ....+.|||
T Consensus 157 ~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~---V~~~Id~~~L~~~~~~~~~~~~vlNGIA~ 232 (262)
T 3nol_A 157 TPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGK---VTGIIDLNGILAEAGPLPSPIDVLNGIAW 232 (262)
T ss_dssp SEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCB---EEEEEECTTGGGGSCSCCSSCCCEEEEEE
T ss_pred eEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCc---EEEEEECCcCccccccccCcCCceEEEEE
Confidence 988887653 23 3456776 67666555568899999998877 44444321 235699999
Q ss_pred CCCCCCEEEEee
Q psy2107 369 SPIDPQLFVSAS 380 (391)
Q Consensus 369 ~~~~~~~l~s~~ 380 (391)
+|+..++++||-
T Consensus 233 dp~~~~lfVTGK 244 (262)
T 3nol_A 233 DKEHHRLFVTGK 244 (262)
T ss_dssp ETTTTEEEEEET
T ss_pred cCCCCEEEEECC
Confidence 997777777663
No 238
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.69 E-value=3.2e-05 Score=64.14 Aligned_cols=215 Identities=13% Similarity=0.105 Sum_probs=127.0
Q ss_pred cEEEEEec--CC-EEEEEECCCeEEEEcCCCceEEecc-CCCCCeeEEEEEecCCC-CeEEEEEeCCCcEEEEeecCCCC
Q psy2107 118 WVSAIDFH--ND-WILTGCYDHSVHIWTRRGEHKLNIP-GHGGPVKGVAWLYNDGK-DAAFISVSTDQTAMIWEWKVESN 192 (391)
Q Consensus 118 ~V~~~~~~--~~-~l~t~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~l~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~ 192 (391)
...+++++ ++ ++++-..++.|..++.++.....+. ........+++ +++ +.++++-...+.|.+++++ ..
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~---d~~~~~lyv~d~~~~~I~~~~~~--g~ 111 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIAL---DHLGRTIFWTDSQLDRIEVAKMD--GT 111 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEE---ETTTTEEEEEETTTTEEEEEETT--SC
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEE---EecCCeEEEEECCCCEEEEEEcC--CC
Confidence 45678886 34 4445556789999999665443332 22246788998 443 5566666667889998854 22
Q ss_pred ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC---CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107 193 SIECIHVCRGHERGLETVTVSESRQQFATGGW---DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI 269 (391)
Q Consensus 193 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (391)
....+ ..........++++|++..|+.+.. .+.|..++++.... ..+
T Consensus 112 ~~~~~--~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~---------------------------~~~- 161 (267)
T 1npe_A 112 QRRVL--FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR---------------------------RIL- 161 (267)
T ss_dssp SCEEE--ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC---------------------------EEE-
T ss_pred CEEEE--EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc---------------------------EEE-
Confidence 22221 2222246789999996665555543 36788888753110 011
Q ss_pred eecCccCcccEEEecc-CCeEEEE-ECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC
Q psy2107 270 TLKGHKEAISAVQWTA-VDEIITS-SWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK 347 (391)
Q Consensus 270 ~~~~~~~~v~~~~~~~-~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~ 347 (391)
....-.....+++++ ++.|+.+ ...+.|.++|..................++.. .+.++++....+.|..+|..++
T Consensus 162 -~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g 239 (267)
T 1npe_A 162 -AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAIS 239 (267)
T ss_dssp -ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTT
T ss_pred -EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe-CCEEEEEECCCCeEEEEeCCCC
Confidence 111223457888986 4666555 45689999998765444334333334556654 3444444445689999998765
Q ss_pred CcceEEEEecccc-CcEEEEEECCCC
Q psy2107 348 EGAIVKSTFSSHK-EWVQSVRWSPID 372 (391)
Q Consensus 348 ~~~~~~~~~~~h~-~~v~~~~~~~~~ 372 (391)
+ ....+.... .....+++.|++
T Consensus 240 ~---~~~~i~~g~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 240 K---EMDTFHPHKQTRLYGITIALSQ 262 (267)
T ss_dssp E---EEEEECCSSCCCCCCEEEECSC
T ss_pred C---ceEEEccccccccceeeecCcc
Confidence 5 455554332 246778888743
No 239
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.69 E-value=3.3e-05 Score=66.05 Aligned_cols=227 Identities=12% Similarity=0.073 Sum_probs=132.6
Q ss_pred EEEec--CCEEEEEECCCeEEEEcCCCceEEeccC--------------------CCCCeeEEEEEecCC-CCeEEEEEe
Q psy2107 121 AIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPG--------------------HGGPVKGVAWLYNDG-KDAAFISVS 177 (391)
Q Consensus 121 ~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~--------------------~~~~v~~l~~~~~~~-~~~~l~s~~ 177 (391)
+++++ +++++++..++.|..|+..+.....+.. .......+++ ++ ++.++ .+.
T Consensus 23 ~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~---~~~~g~l~-v~d 98 (322)
T 2fp8_A 23 SFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISY---NLQNNQLY-IVD 98 (322)
T ss_dssp CEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEE---ETTTTEEE-EEE
T ss_pred EEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEE---cCCCCcEE-EEE
Confidence 45665 5568888889999999986644433221 0134678888 44 45544 444
Q ss_pred CCCcEEEEeecCCCCceeEEEEE-ec-CCCCeEEEEEcC-CCCEEEEEeC-----------------CCcEEEEECCCCC
Q psy2107 178 TDQTAMIWEWKVESNSIECIHVC-RG-HERGLETVTVSE-SRQQFATGGW-----------------DCLLKIWSADISK 237 (391)
Q Consensus 178 ~dg~v~iwd~~~~~~~~~~~~~~-~~-~~~~v~~l~~~~-~~~~l~sg~~-----------------dg~i~iwd~~~~~ 237 (391)
..+.+..+|.. ....+.+... .+ .......+++.+ +|++.++-.. ++.|..||..+++
T Consensus 99 ~~~~i~~~d~~--~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 99 CYYHLSVVGSE--GGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp TTTEEEEECTT--CEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred CCCCEEEEeCC--CCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 44557777732 2222222111 11 123467899999 8876665432 2567777764422
Q ss_pred CCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEE-ECCCeEEEEecccCc--eeEEE-
Q psy2107 238 ERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITS-SWDHTLKIWDAELGG--MKSEI- 312 (391)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~-~~dg~i~iwd~~~~~--~~~~~- 312 (391)
. ..+...-.....+++++++ .++.+ +..+.|..|++.... ....+
T Consensus 177 ~------------------------------~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~ 226 (322)
T 2fp8_A 177 T------------------------------TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV 226 (322)
T ss_dssp E------------------------------EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE
T ss_pred E------------------------------EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE
Confidence 1 1111112334678999765 46555 556899999987521 11111
Q ss_pred ECCeeeEEEEECCCCCEEEEeeC----------CCcEEEEcCCCCCcceEEEEeccc----cCcEEEEEECCCCCCEEEE
Q psy2107 313 VGNKSFFDVHYSPLSKLVITASA----------DKQIRLYDPKVKEGAIVKSTFSSH----KEWVQSVRWSPIDPQLFVS 378 (391)
Q Consensus 313 ~~~~~i~~~~~~p~~~~l~~g~~----------dg~i~iwd~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~l~s 378 (391)
.... ...+++.++|++.++... .+.|..+|.. ++ ....+... ...++++++. +++++++
T Consensus 227 ~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~---~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~ 299 (322)
T 2fp8_A 227 KIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GN---ILEVIPLPPPFAGEHFEQIQEH--DGLLYIG 299 (322)
T ss_dssp ECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SC---EEEEEECCTTTTTSCCCEEEEE--TTEEEEE
T ss_pred eCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CC---EEEEEECCCCCccccceEEEEe--CCEEEEe
Confidence 2223 677999999987766544 4678888864 33 33333322 2356777773 5677777
Q ss_pred eeCCCcEEEEec
Q psy2107 379 ASFDNSVKLWDL 390 (391)
Q Consensus 379 ~~~dg~v~iwdl 390 (391)
....+.|.++++
T Consensus 300 ~~~~~~i~~~~~ 311 (322)
T 2fp8_A 300 TLFHGSVGILVY 311 (322)
T ss_dssp CSSCSEEEEEEC
T ss_pred ecCCCceEEEec
Confidence 777888998876
No 240
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.67 E-value=7.1e-06 Score=74.44 Aligned_cols=93 Identities=13% Similarity=0.123 Sum_probs=68.6
Q ss_pred CeEEEEeccc--Cce-eEEEECCeeeEEEEECCCCCEEEEee-CCCcEEEEcCCCCC---------cceEEEEeccccCc
Q psy2107 296 HTLKIWDAEL--GGM-KSEIVGNKSFFDVHYSPLSKLVITAS-ADKQIRLYDPKVKE---------GAIVKSTFSSHKEW 362 (391)
Q Consensus 296 g~i~iwd~~~--~~~-~~~~~~~~~i~~~~~~p~~~~l~~g~-~dg~i~iwd~~~~~---------~~~~~~~~~~h~~~ 362 (391)
+.|.+.|.++ ++. +..+.......++.++|||+++++++ .+..|.++|+.+.+ ......... -...
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~g 332 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLG 332 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSC
T ss_pred CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCC
Confidence 4589999988 555 66776666778899999999776654 67899999987431 011233332 2345
Q ss_pred EEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 363 VQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 363 v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
...++|+|++ +..++.-.|+.|.+||+
T Consensus 333 P~h~aF~~dG-~aY~t~~ldsqV~kwdi 359 (595)
T 1fwx_A 333 PLHTAFDGRG-NAYTSLFLDSQVVKWNI 359 (595)
T ss_dssp EEEEEECTTS-EEEEEETTTTEEEEEEH
T ss_pred cceEEECCCC-eEEEEEecCCcEEEEEh
Confidence 8999999955 77788889999999996
No 241
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.66 E-value=3.9e-05 Score=62.21 Aligned_cols=179 Identities=11% Similarity=0.078 Sum_probs=116.9
Q ss_pred eeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy2107 158 VKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISK 237 (391)
Q Consensus 158 v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~ 237 (391)
...+.| + ++.++.+.+.+|.|+++|+... ...... +.. ...-..+++..+ ++.+..-.++.+.+||..+.+
T Consensus 57 tqGL~~---~-~~~Ly~stG~~g~v~~iD~~Tg--kv~~~~-l~~-~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 57 TQGLVF---H-QGHFFESTGHQGTLRQLSLESA--QPVWME-RLG-NIFAEGLASDGE-RLYQLTWTEGLLFTWSGMPPQ 127 (268)
T ss_dssp EEEEEE---E-TTEEEEEETTTTEEEECCSSCS--SCSEEE-ECT-TCCEEEEEECSS-CEEEEESSSCEEEEEETTTTE
T ss_pred cceEEE---E-CCEEEEEcCCCCEEEEEECCCC--cEEeEE-CCC-CcceeEEEEeCC-EEEEEEccCCEEEEEECCcCc
Confidence 367888 3 3677888888899999996533 222222 332 112234555543 444455578899999998733
Q ss_pred CCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe-
Q psy2107 238 ERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK- 316 (391)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~- 316 (391)
.+.++..... -..+++. ++.|+.+..++.|.++|..+.+.+.++....
T Consensus 128 -----------------------------~~~ti~~~~e-GwGLt~D-g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~ 176 (268)
T 3nok_A 128 -----------------------------RERTTRYSGE-GWGLCYW-NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLR 176 (268)
T ss_dssp -----------------------------EEEEEECSSC-CCCEEEE-TTEEEEECSSSEEEEECTTTCCEEEEEECEET
T ss_pred -----------------------------EEEEEeCCCc-eeEEecC-CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCC
Confidence 4444443222 2345543 4667777779999999999999888876532
Q ss_pred -----eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecc-------------ccCcEEEEEECCCCCCEEEE
Q psy2107 317 -----SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS-------------HKEWVQSVRWSPIDPQLFVS 378 (391)
Q Consensus 317 -----~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~-------------h~~~v~~~~~~~~~~~~l~s 378 (391)
.++.+.|. +|+..+....++.|.+.|+++++ ++..+.- -....+.|||+|++.++++|
T Consensus 177 g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~---V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVT 252 (268)
T 3nok_A 177 GQPVELINELECA-NGVIYANIWHSSDVLEIDPATGT---VVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMT 252 (268)
T ss_dssp TEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCB---EEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEE
T ss_pred CcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCc---EEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEe
Confidence 34567776 67655555568899999998877 4444332 12367999999987888887
Q ss_pred ee
Q psy2107 379 AS 380 (391)
Q Consensus 379 ~~ 380 (391)
|-
T Consensus 253 GK 254 (268)
T 3nok_A 253 GK 254 (268)
T ss_dssp ET
T ss_pred CC
Confidence 74
No 242
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.66 E-value=7e-05 Score=63.54 Aligned_cols=233 Identities=9% Similarity=0.027 Sum_probs=128.2
Q ss_pred cEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCc--EEEEeecCCCCc
Q psy2107 118 WVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQT--AMIWEWKVESNS 193 (391)
Q Consensus 118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~--v~iwd~~~~~~~ 193 (391)
....++++ ++++++-..++.|..||.++....... .......+++ +++++++++...... |..++ ..+..
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~-~~~~p~gia~---~~dG~l~vad~~~~~~~v~~~d--~~~g~ 106 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHAT-VEGKVSGLAF---TSNGDLVATGWNADSIPVVSLV--KSDGT 106 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEE-CSSEEEEEEE---CTTSCEEEEEECTTSCEEEEEE--CTTSC
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEe-CCCCceeEEE---cCCCcEEEEeccCCcceEEEEc--CCCCe
Confidence 45678886 566666668899999998775544332 3456888998 777876666544333 54455 33333
Q ss_pred eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC
Q psy2107 194 IECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG 273 (391)
Q Consensus 194 ~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (391)
...+.... .......++..+++..+++-..++.|..+|..++..... ..... ....... .
T Consensus 107 ~~~~~~~~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~-----------~~~~~----~~~~~~~----~ 166 (306)
T 2p4o_A 107 VETLLTLP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIW-----------LEHPM----LARSNSE----S 166 (306)
T ss_dssp EEEEEECT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEE-----------EECGG----GSCSSTT----C
T ss_pred EEEEEeCC-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEE-----------EECCc----ccccccc----C
Confidence 33333221 223345555556555455544688888888754210000 00000 0000000 0
Q ss_pred ccCcccEEEecc-CCeEEEE-ECCCeEEEEeccc-Cce--eEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107 274 HKEAISAVQWTA-VDEIITS-SWDHTLKIWDAEL-GGM--KSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348 (391)
Q Consensus 274 ~~~~v~~~~~~~-~~~l~s~-~~dg~i~iwd~~~-~~~--~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~ 348 (391)
.-.....+ ++ ++.++.+ ...+.|..||+.. ++. ...+........++++++|+++++....+.|.++|.. ++
T Consensus 167 ~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~ 243 (306)
T 2p4o_A 167 VFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RS 243 (306)
T ss_dssp CSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CC
T ss_pred CCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CC
Confidence 00112234 43 3455444 5678999999874 332 1222212345668899999988877778899999974 32
Q ss_pred cceEEEEeccccCcEEEEEEC---CCCCCEEEEee
Q psy2107 349 GAIVKSTFSSHKEWVQSVRWS---PIDPQLFVSAS 380 (391)
Q Consensus 349 ~~~~~~~~~~h~~~v~~~~~~---~~~~~~l~s~~ 380 (391)
...+.........+++++|. |+++.++++..
T Consensus 244 -~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 244 -TTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp -EEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred -EEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 11122233333568999998 75566666554
No 243
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.66 E-value=0.00011 Score=71.10 Aligned_cols=238 Identities=10% Similarity=0.085 Sum_probs=146.7
Q ss_pred CCcEEEEEec-CCEEEEEECCCeEEEEcCCCceEEeccC--------CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107 116 DDWVSAIDFH-NDWILTGCYDHSVHIWTRRGEHKLNIPG--------HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE 186 (391)
Q Consensus 116 ~~~V~~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~--------~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd 186 (391)
...|.++..+ ...+..|+.++-+.+||........+.. ....|.++.. +.++.+ ..|+.+ .|.+|+
T Consensus 214 ~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~---d~~g~l-Wigt~~-Gl~~~~ 288 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAM---DSQNRL-WIGTFN-DLNIYH 288 (795)
T ss_dssp CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEE---CTTSCE-EEEESS-CEEEEE
T ss_pred CCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEE---cCCCCE-EEEeCC-hhheEc
Confidence 4578888876 4556667655458889986655544331 1356888887 656654 445555 588888
Q ss_pred ecCCCCceeEEEEE-----ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccccccc
Q psy2107 187 WKVESNSIECIHVC-----RGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSS 261 (391)
Q Consensus 187 ~~~~~~~~~~~~~~-----~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (391)
.. .......... .-....|.++...++|. |..|+.++-|..|+..+..... +..
T Consensus 289 ~~--~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~------------------~~~ 347 (795)
T 4a2l_A 289 EG--TDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKN------------------IRN 347 (795)
T ss_dssp TT--TTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEE------------------ECC
T ss_pred CC--CCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceE------------------EcC
Confidence 32 2222211100 01235799999999887 6677777789889875432100 000
Q ss_pred CCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEE---------CCeeeEEEEECCCCCEEEE
Q psy2107 262 ASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIV---------GNKSFFDVHYSPLSKLVIT 332 (391)
Q Consensus 262 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---------~~~~i~~~~~~p~~~~l~~ 332 (391)
. .. .-......|.++...+++.|..|+.++-|..||..++....... ....|.++...++++.|..
T Consensus 348 ---~-~~-~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi 422 (795)
T 4a2l_A 348 ---I-PY-KNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI 422 (795)
T ss_dssp ---C-TT-SSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE
T ss_pred ---C-CC-CCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE
Confidence 0 00 00012456888888888889999999889999988765433221 1246888988888885666
Q ss_pred eeCCCcEEEEcCCCCCcceEEEEec----cccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 333 ASADKQIRLYDPKVKEGAIVKSTFS----SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 333 g~~dg~i~iwd~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
|+.++.|..||..++. ...... .....|.++...+ ++.+.+ |+.+ -+.+||.
T Consensus 423 gt~~~Gl~~~d~~~~~---~~~~~~~~~~l~~~~v~~i~~d~-~g~lwi-gt~~-Gl~~~~~ 478 (795)
T 4a2l_A 423 GTHAGGLSILHRNSGQ---VENFNQRNSQLVNENVYAILPDG-EGNLWL-GTLS-ALVRFNP 478 (795)
T ss_dssp EETTTEEEEEETTTCC---EEEECTTTSCCSCSCEEEEEECS-SSCEEE-EESS-CEEEEET
T ss_pred EeCcCceeEEeCCCCc---EEEeecCCCCcCCCeeEEEEECC-CCCEEE-EecC-ceeEEeC
Confidence 7777789999987654 222211 1345799999888 445444 3344 4666664
No 244
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.64 E-value=2.3e-05 Score=64.29 Aligned_cols=189 Identities=8% Similarity=0.053 Sum_probs=122.4
Q ss_pred cEEEEEecC-CEEEEEEC---CCeEEEEcC-CCceEEeccC-CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107 118 WVSAIDFHN-DWILTGCY---DHSVHIWTR-RGEHKLNIPG-HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES 191 (391)
Q Consensus 118 ~V~~~~~~~-~~l~t~~~---dg~i~iwd~-~~~~~~~~~~-~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 191 (391)
....++|++ ..|+.++. ++.|+++|+ +++.+..+.- .......+++ . .+.+.++.-.++.+.++|..
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~---~-g~~lyv~t~~~~~v~viD~~--- 94 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTL---L-NEKLYQVVWLKNIGFIYDRR--- 94 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEE---E-TTEEEEEETTCSEEEEEETT---
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEE---e-CCEEEEEEecCCEEEEEECC---
Confidence 357889986 55555543 589999999 5555555432 1112234555 2 23455556678999999943
Q ss_pred CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee
Q psy2107 192 NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL 271 (391)
Q Consensus 192 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (391)
+.+.+..+...... ...++++++.++++..++.|.++|..+.+ ....+
T Consensus 95 -t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~-----------------------------v~~~I 142 (266)
T 2iwa_A 95 -TLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFK-----------------------------LIKKH 142 (266)
T ss_dssp -TTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCC-----------------------------EEEEE
T ss_pred -CCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCc-----------------------------EEEEE
Confidence 44556666432111 23355577767666678899999987633 23333
Q ss_pred cC--ccC---cccEEEeccCCeEEEEE-CCCeEEEEecccCceeEEEECC--------------eeeEEEEECCCCC-EE
Q psy2107 272 KG--HKE---AISAVQWTAVDEIITSS-WDHTLKIWDAELGGMKSEIVGN--------------KSFFDVHYSPLSK-LV 330 (391)
Q Consensus 272 ~~--~~~---~v~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~--------------~~i~~~~~~p~~~-~l 330 (391)
.- ... ....+.|. ++.+++.. .++.|.+.|..+++.+..+... .....++|+|+++ ++
T Consensus 143 ~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lf 221 (266)
T 2iwa_A 143 NVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIF 221 (266)
T ss_dssp ECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEE
T ss_pred EECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEE
Confidence 21 111 24567777 46766665 5789999999999999998753 2457899999976 55
Q ss_pred EEeeCCCcEEEEcCCC
Q psy2107 331 ITASADKQIRLYDPKV 346 (391)
Q Consensus 331 ~~g~~dg~i~iwd~~~ 346 (391)
+++...+.+.+.++..
T Consensus 222 VTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 222 VTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEETTCSEEEEEEEEE
T ss_pred EECCCCCeEEEEEEec
Confidence 5666778888888654
No 245
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.60 E-value=5.9e-05 Score=60.56 Aligned_cols=184 Identities=9% Similarity=0.046 Sum_probs=115.5
Q ss_pred CCCC--CeeEEEEEecCCCCeEEEEEeCCC--cEEEEeecCCCCceeEEEEEecCCCC-eEEEEEcCCCCEEEEEeCCCc
Q psy2107 153 GHGG--PVKGVAWLYNDGKDAAFISVSTDQ--TAMIWEWKVESNSIECIHVCRGHERG-LETVTVSESRQQFATGGWDCL 227 (391)
Q Consensus 153 ~~~~--~v~~l~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~-v~~l~~~~~~~~l~sg~~dg~ 227 (391)
.|.. -...+.| ++ +.++.+.+.+| .|+.+|+. ++ +.+....-.... -..+++.. +++....-.++.
T Consensus 16 phd~~~ftqGL~~---~~-~~LyestG~~g~S~v~~vD~~--tg--kv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~~~~ 86 (243)
T 3mbr_X 16 PHDTTAFTEGLFY---LR-GHLYESTGETGRSSVRKVDLE--TG--RILQRAEVPPPYFGAGIVAWR-DRLIQLTWRNHE 86 (243)
T ss_dssp ECCTTCCEEEEEE---ET-TEEEEEECCTTSCEEEEEETT--TC--CEEEEEECCTTCCEEEEEEET-TEEEEEESSSSE
T ss_pred CCCCccccccEEE---EC-CEEEEECCCCCCceEEEEECC--CC--CEEEEEeCCCCcceeEEEEeC-CEEEEEEeeCCE
Confidence 4554 3558888 43 56666666654 89999954 33 344444322221 13344442 334444556889
Q ss_pred EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCc
Q psy2107 228 LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGG 307 (391)
Q Consensus 228 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 307 (391)
+.+||.++.+ .+.++..... -..+++. ++.|+.+..++.|.++|..+.+
T Consensus 87 v~v~D~~tl~-----------------------------~~~ti~~~~~-Gwglt~d-g~~L~vSdgs~~l~~iDp~t~~ 135 (243)
T 3mbr_X 87 GFVYDLATLT-----------------------------PRARFRYPGE-GWALTSD-DSHLYMSDGTAVIRKLDPDTLQ 135 (243)
T ss_dssp EEEEETTTTE-----------------------------EEEEEECSSC-CCEEEEC-SSCEEEECSSSEEEEECTTTCC
T ss_pred EEEEECCcCc-----------------------------EEEEEeCCCC-ceEEeeC-CCEEEEECCCCeEEEEeCCCCe
Confidence 9999997733 4444443222 2455543 4567777778999999999999
Q ss_pred eeEEEECCe------eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecc-------------ccCcEEEEEE
Q psy2107 308 MKSEIVGNK------SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS-------------HKEWVQSVRW 368 (391)
Q Consensus 308 ~~~~~~~~~------~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~-------------h~~~v~~~~~ 368 (391)
.+.++.... .++.+.+. +|+..+....+..|.+.|+++++ ++..+.- -....+.|++
T Consensus 136 ~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~---V~~~idl~~l~~~~~~~~~~~~~vlNGIA~ 211 (243)
T 3mbr_X 136 QVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGK---VVAWIDLQALVPDADALTDSTNDVLNGIAF 211 (243)
T ss_dssp EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCB---EEEEEECGGGSTTTTSCCCTTSSCEEEEEE
T ss_pred EEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCC---EEEEEECCcCccccccccCCcCCceEEEEE
Confidence 888876532 34556665 56655555567899999999877 4444331 1236799999
Q ss_pred CCCCCCEEEEee
Q psy2107 369 SPIDPQLFVSAS 380 (391)
Q Consensus 369 ~~~~~~~l~s~~ 380 (391)
+|+..++++||-
T Consensus 212 d~~~~~lfVTGK 223 (243)
T 3mbr_X 212 DAEHDRLFVTGK 223 (243)
T ss_dssp ETTTTEEEEEET
T ss_pred cCCCCEEEEECC
Confidence 997777777763
No 246
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.60 E-value=7.1e-05 Score=62.07 Aligned_cols=220 Identities=8% Similarity=0.027 Sum_probs=128.2
Q ss_pred EEEEEECCCeEEEEcCCCceEE------eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe
Q psy2107 128 WILTGCYDHSVHIWTRRGEHKL------NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR 201 (391)
Q Consensus 128 ~l~t~~~dg~i~iwd~~~~~~~------~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 201 (391)
+|+.+.. +.|+.+++++.... .+.........++|.|. .+.++++-..++.|..++.+ ..... ....
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~--~~~ly~~d~~~~~I~~~~~~--g~~~~--~~~~ 75 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCV--DKVVYWTDISEPSIGRASLH--GGEPT--TIIR 75 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETT--TTEEEEEETTTTEEEEEESS--SCCCE--EEEC
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecC--CCEEEEEECCCCEEEEEecC--CCCcE--EEEE
Confidence 3444443 47888887554321 11111234678888332 45566666677899999854 22221 2222
Q ss_pred cCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccE
Q psy2107 202 GHERGLETVTVSESRQQFA-TGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISA 280 (391)
Q Consensus 202 ~~~~~v~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 280 (391)
........+++++++..|+ +-...+.|.+++.+.... .............
T Consensus 76 ~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-----------------------------~~~~~~~~~~P~~ 126 (267)
T 1npe_A 76 QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-----------------------------RVLFDTGLVNPRG 126 (267)
T ss_dssp TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----------------------------EEEECSSCSSEEE
T ss_pred CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-----------------------------EEEEECCCCCccE
Confidence 2235678999999755554 445567899998854110 1111111134578
Q ss_pred EEecc-CCeEEEEEC---CCeEEEEecccCceeEEEE-C-CeeeEEEEECCCCCEEEE-eeCCCcEEEEcCCCCCcceEE
Q psy2107 281 VQWTA-VDEIITSSW---DHTLKIWDAELGGMKSEIV-G-NKSFFDVHYSPLSKLVIT-ASADKQIRLYDPKVKEGAIVK 353 (391)
Q Consensus 281 ~~~~~-~~~l~s~~~---dg~i~iwd~~~~~~~~~~~-~-~~~i~~~~~~p~~~~l~~-g~~dg~i~iwd~~~~~~~~~~ 353 (391)
+++++ ++.++.+.. .+.|..+++.. .....+. . -.....++++|++..|.. -...+.|.++|+.... ..
T Consensus 127 i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~---~~ 202 (267)
T 1npe_A 127 IVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG---RR 202 (267)
T ss_dssp EEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE---EE
T ss_pred EEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc---eE
Confidence 88886 677766654 36888888753 3333332 2 235678999998765554 4456899999986432 22
Q ss_pred EEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 354 STFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 354 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
..... ......++.. ++.++++....+.|.++|.
T Consensus 203 ~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 203 KVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp EEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEET
T ss_pred EEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeC
Confidence 22222 2335677653 5566666666788888875
No 247
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.57 E-value=5.6e-06 Score=71.77 Aligned_cols=231 Identities=10% Similarity=-0.015 Sum_probs=131.2
Q ss_pred EEEec--CCEEEEEE----------CCCeEEEEcC-CCceEEeccCC-------CCCeeEEEEEecCCCCeEEEEEeC--
Q psy2107 121 AIDFH--NDWILTGC----------YDHSVHIWTR-RGEHKLNIPGH-------GGPVKGVAWLYNDGKDAAFISVST-- 178 (391)
Q Consensus 121 ~~~~~--~~~l~t~~----------~dg~i~iwd~-~~~~~~~~~~~-------~~~v~~l~~~~~~~~~~~l~s~~~-- 178 (391)
.+.++ +++++++. .++.|.+||. +.+.+.++.-. ......+++ ++++++++.+..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~---SpDGk~lyVan~~~ 145 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGN---CASSACLLFFLFGS 145 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEE---CTTSSCEEEEECSS
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEE---cCCCCEEEEEccCC
Confidence 46776 66666665 3789999999 55555565422 123557888 888988888875
Q ss_pred CCcEEE--EeecCCCCceeEEEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCC-----CCCCCC----CCCCC
Q psy2107 179 DQTAMI--WEWKVESNSIECIHVCRGHERGLETVTVSESR-QQFATGGWDCLLKIWSADI-----SKERGD----PSENG 246 (391)
Q Consensus 179 dg~v~i--wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~-----~~~~~~----~~~~~ 246 (391)
+..+.+ +|... +..+... +. ..+.|++ ..+++.+.||.+.+.|+.+ ++.... .....
T Consensus 146 ~~~v~V~~iD~~t-------v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~ 214 (368)
T 1mda_H 146 SAAAGLSVPGASD-------DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSS 214 (368)
T ss_dssp SCEEEEEETTTEE-------EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCS
T ss_pred CCeEEEEEEchhh-------ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCC
Confidence 467888 88431 2333211 11 1123433 3455667788888888876 332210 00000
Q ss_pred CCCccccccccccccCC---------CC--CceeeecC----------ccCcccEEEeccC-CeEEEEEC---------C
Q psy2107 247 DEGTTSKKRKKEYSSAS---------SR--TPLITLKG----------HKEAISAVQWTAV-DEIITSSW---------D 295 (391)
Q Consensus 247 ~~~~~~~~~~~~~~~~~---------~~--~~~~~~~~----------~~~~v~~~~~~~~-~~l~s~~~---------d 295 (391)
.+. ........++... .. +.+..+.. .......+.++++ ++++.+.. +
T Consensus 215 ~P~-~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~ 293 (368)
T 1mda_H 215 QAA-QANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAA 293 (368)
T ss_dssp CCE-EETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCE
T ss_pred Ccc-ccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccC
Confidence 000 0000000000000 00 00000100 0111223678854 55665432 2
Q ss_pred CeEEEEecccCceeEEEECCeeeEEEEECCCCC-EEEEee-CCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECC
Q psy2107 296 HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSK-LVITAS-ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP 370 (391)
Q Consensus 296 g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~-~l~~g~-~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 370 (391)
+.+.++|+.+.+.+.++........++|+|+|+ ++++.. .++.|.++|+.+.+ .+..+..... ...+++.+
T Consensus 294 ~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k---vv~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 294 ENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ---DQSSVELDKG-PESLSVQN 366 (368)
T ss_dssp EEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCE---EEEECCCCSC-CCEEECCC
T ss_pred CCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCc---EEEEEECCCC-CCEEEeec
Confidence 456699999999999888777899999999998 455666 58999999998876 6667664433 45666653
No 248
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.56 E-value=0.00018 Score=69.71 Aligned_cols=237 Identities=8% Similarity=0.105 Sum_probs=145.0
Q ss_pred CCcEEEEEec-CCEEEEEECCCeEEEEcCCCceEEeccC--------CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107 116 DDWVSAIDFH-NDWILTGCYDHSVHIWTRRGEHKLNIPG--------HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE 186 (391)
Q Consensus 116 ~~~V~~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~--------~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd 186 (391)
...|.++..+ ...|..|+.+| |.+||........+.. ....|.++.. +.++. +..|+.++.|..|+
T Consensus 262 ~~~i~~i~~d~~g~lWigt~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~---D~~g~-lWigt~~~Gl~~~~ 336 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWIGTFND-LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFM---DSQGG-MWLGTYFGGLNYYH 336 (795)
T ss_dssp CSBEEEEEECTTSCEEEEESSC-EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEE---CTTSC-EEEEESSSCEEEEC
T ss_pred CCeEEEEEEcCCCCEEEEeCCh-hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEE---eCCcC-EEEEECCCCeEEeC
Confidence 4579999887 34555666664 8889986655554421 2356888887 66665 56677778898888
Q ss_pred ecCCCCceeEEEEEe----cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107 187 WKVESNSIECIHVCR----GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA 262 (391)
Q Consensus 187 ~~~~~~~~~~~~~~~----~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (391)
.. ........... -....|.++...++++ |..|+.++-|..|+..++....-.
T Consensus 337 ~~--~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~-------------------- 393 (795)
T 4a2l_A 337 PI--RNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYT-------------------- 393 (795)
T ss_dssp GG--GGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEEC--------------------
T ss_pred CC--cccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEe--------------------
Confidence 43 22222211110 0235699999998887 666888878999988653210000
Q ss_pred CCCCceeee-cCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEE-----CCeeeEEEEECCCCCEEEEeeC
Q psy2107 263 SSRTPLITL-KGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIV-----GNKSFFDVHYSPLSKLVITASA 335 (391)
Q Consensus 263 ~~~~~~~~~-~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~-----~~~~i~~~~~~p~~~~l~~g~~ 335 (391)
......- ......|.++...+++. |..|+.++-|..||..+++...... ....|.++...++|.+.+.. .
T Consensus 394 --~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~ 470 (795)
T 4a2l_A 394 --LQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L 470 (795)
T ss_dssp --CC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S
T ss_pred --cCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c
Confidence 0000000 01235688888877777 8999988889999988776433221 13468889988888766544 4
Q ss_pred CCcEEEEcCCCCCcceEEEEec------cccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 336 DKQIRLYDPKVKEGAIVKSTFS------SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 336 dg~i~iwd~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
+.+.+||..+.. ...... -....|.++...+ ++.+.+ |+. +-+..||.
T Consensus 471 -~Gl~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWi-gt~-~Gl~~~~~ 524 (795)
T 4a2l_A 471 -SALVRFNPEQRS---FTTIEKEKDGTPVVSKQITTLFRDS-HKRLWI-GGE-EGLSVFKQ 524 (795)
T ss_dssp -SCEEEEETTTTE---EEECCBCTTCCBCCCCCEEEEEECT-TCCEEE-EES-SCEEEEEE
T ss_pred -CceeEEeCCCCe---EEEccccccccccCCceEEEEEECC-CCCEEE-EeC-CceEEEeC
Confidence 458889976543 221111 1235799999988 444444 333 45666663
No 249
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.55 E-value=2.9e-05 Score=62.95 Aligned_cols=176 Identities=13% Similarity=0.172 Sum_probs=111.4
Q ss_pred cEEEEEecCC-EEEEEECCC--eEEEEcC-CCceEEeccCCCCCeeE--EEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107 118 WVSAIDFHND-WILTGCYDH--SVHIWTR-RGEHKLNIPGHGGPVKG--VAWLYNDGKDAAFISVSTDQTAMIWEWKVES 191 (391)
Q Consensus 118 ~V~~~~~~~~-~l~t~~~dg--~i~iwd~-~~~~~~~~~~~~~~v~~--l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 191 (391)
....+.|+++ ++.+.+.+| .|+++|+ +++.+..+.- ...... ++. . .+.+.++.-.++.+.+||..
T Consensus 44 ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l-~~~~FgeGit~---~-g~~ly~ltw~~~~v~v~D~~--- 115 (262)
T 3nol_A 44 FTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIEL-GKRYFGEGISD---W-KDKIVGLTWKNGLGFVWNIR--- 115 (262)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEEC-CTTCCEEEEEE---E-TTEEEEEESSSSEEEEEETT---
T ss_pred ccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEec-CCccceeEEEE---e-CCEEEEEEeeCCEEEEEECc---
Confidence 3577888855 455555555 8999999 4555555543 233333 444 2 23445555568999999943
Q ss_pred CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee
Q psy2107 192 NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL 271 (391)
Q Consensus 192 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (391)
+.+.+.++.... ....+.++++.|+....++.|.++|..+.+ .+..+
T Consensus 116 -t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~-----------------------------v~~~I 162 (262)
T 3nol_A 116 -NLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLT-----------------------------PVRTI 162 (262)
T ss_dssp -TCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCS-----------------------------EEEEE
T ss_pred -cCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCe-----------------------------EEEEE
Confidence 445666665322 222333566667666667889999987743 33333
Q ss_pred cC--cc---CcccEEEeccCCeEEEEE-CCCeEEEEecccCceeEEEECC-------------eeeEEEEECCCCCEEEE
Q psy2107 272 KG--HK---EAISAVQWTAVDEIITSS-WDHTLKIWDAELGGMKSEIVGN-------------KSFFDVHYSPLSKLVIT 332 (391)
Q Consensus 272 ~~--~~---~~v~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~-------------~~i~~~~~~p~~~~l~~ 332 (391)
.. .. ..++.+.|. ++.+++.. .+..|.+.|.++++.+..+... ...+.++++|+++.|.+
T Consensus 163 ~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfV 241 (262)
T 3nol_A 163 TVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFV 241 (262)
T ss_dssp ECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEE
T ss_pred EeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEE
Confidence 22 12 223446676 45666665 5889999999999999988753 24578999998876666
Q ss_pred eeC
Q psy2107 333 ASA 335 (391)
Q Consensus 333 g~~ 335 (391)
.+.
T Consensus 242 TGK 244 (262)
T 3nol_A 242 TGK 244 (262)
T ss_dssp EET
T ss_pred ECC
Confidence 553
No 250
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.54 E-value=3e-05 Score=62.84 Aligned_cols=174 Identities=11% Similarity=0.076 Sum_probs=112.4
Q ss_pred cEEEEEecCC-EEEEEECCCeEEEEcC-CCceEEeccCCCCCee--EEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCc
Q psy2107 118 WVSAIDFHND-WILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVK--GVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNS 193 (391)
Q Consensus 118 ~V~~~~~~~~-~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~--~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 193 (391)
....+.|+++ ++.+.+.+|.|+++|+ +++.+..+ -..... .+++ .. +.+.++...++.+.+||.. +
T Consensus 56 ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~---~g-~~Ly~ltw~~~~v~V~D~~----T 125 (268)
T 3nok_A 56 FTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLAS---DG-ERLYQLTWTEGLLFTWSGM----P 125 (268)
T ss_dssp CEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEE---CS-SCEEEEESSSCEEEEEETT----T
T ss_pred ccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEE---eC-CEEEEEEccCCEEEEEECC----c
Confidence 4568888866 5666667789999999 45555444 223333 3555 32 3455556678999999943 4
Q ss_pred eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC
Q psy2107 194 IECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG 273 (391)
Q Consensus 194 ~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (391)
.+.+.++..... -..++ ++++.|+.+..++.|.++|..+.+. +..+.-
T Consensus 126 l~~~~ti~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v-----------------------------~~~I~V 173 (268)
T 3nok_A 126 PQRERTTRYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFAL-----------------------------VGAVQV 173 (268)
T ss_dssp TEEEEEEECSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCCE-----------------------------EEEEEC
T ss_pred CcEEEEEeCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCeE-----------------------------EEEEEe
Confidence 566666654222 23344 5677777777789999999877443 333221
Q ss_pred --ccC---cccEEEeccCCeEEEEE-CCCeEEEEecccCceeEEEECC--------------eeeEEEEECCCCCEEEEe
Q psy2107 274 --HKE---AISAVQWTAVDEIITSS-WDHTLKIWDAELGGMKSEIVGN--------------KSFFDVHYSPLSKLVITA 333 (391)
Q Consensus 274 --~~~---~v~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~--------------~~i~~~~~~p~~~~l~~g 333 (391)
+.. .++.+.|.. +.+++.. .+..|.+.|.++++.+..+... .-.+.++++|+++.|++.
T Consensus 174 ~~~g~~v~~lNeLe~~d-G~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVT 252 (268)
T 3nok_A 174 KLRGQPVELINELECAN-GVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMT 252 (268)
T ss_dssp EETTEECCCEEEEEEET-TEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEE
T ss_pred CCCCcccccccccEEeC-CEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEe
Confidence 222 335567764 5666665 5789999999999999888753 245789999986644444
Q ss_pred e
Q psy2107 334 S 334 (391)
Q Consensus 334 ~ 334 (391)
+
T Consensus 253 G 253 (268)
T 3nok_A 253 G 253 (268)
T ss_dssp E
T ss_pred C
Confidence 3
No 251
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.49 E-value=0.00016 Score=58.02 Aligned_cols=175 Identities=9% Similarity=0.118 Sum_probs=110.4
Q ss_pred cEEEEEecCCEEEEE-ECC--CeEEEEcC-CCceEEeccCCCCCe--eEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107 118 WVSAIDFHNDWILTG-CYD--HSVHIWTR-RGEHKLNIPGHGGPV--KGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES 191 (391)
Q Consensus 118 ~V~~~~~~~~~l~t~-~~d--g~i~iwd~-~~~~~~~~~~~~~~v--~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 191 (391)
....+.|+++.|..+ +.+ +.|+.+|+ +++.+....- .... ..++. . .+.+....-.++.+.+||..
T Consensus 22 ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l-~~~~fgeGi~~---~-~~~ly~ltw~~~~v~v~D~~--- 93 (243)
T 3mbr_X 22 FTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEV-PPPYFGAGIVA---W-RDRLIQLTWRNHEGFVYDLA--- 93 (243)
T ss_dssp CEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEEC-CTTCCEEEEEE---E-TTEEEEEESSSSEEEEEETT---
T ss_pred ccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeC-CCCcceeEEEE---e-CCEEEEEEeeCCEEEEEECC---
Confidence 466889987755544 443 49999999 4555554432 2222 23444 2 34555556678999999943
Q ss_pred CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee
Q psy2107 192 NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL 271 (391)
Q Consensus 192 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (391)
+.+.+.++...... ..++ +++..|+.+..++.|.++|..+.+ .+..+
T Consensus 94 -tl~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~-----------------------------~~~~I 140 (243)
T 3mbr_X 94 -TLTPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQ-----------------------------QVGSI 140 (243)
T ss_dssp -TTEEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCC-----------------------------EEEEE
T ss_pred -cCcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCe-----------------------------EEEEE
Confidence 55666666643322 3444 456666666678899999987743 23333
Q ss_pred cC--cc---CcccEEEeccCCeEEEEE-CCCeEEEEecccCceeEEEECC--------------eeeEEEEECCCCCEEE
Q psy2107 272 KG--HK---EAISAVQWTAVDEIITSS-WDHTLKIWDAELGGMKSEIVGN--------------KSFFDVHYSPLSKLVI 331 (391)
Q Consensus 272 ~~--~~---~~v~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~--------------~~i~~~~~~p~~~~l~ 331 (391)
.- +. ..++.+.|. ++.+++.. .+..|.+.|.++++.+..+... .-.+.++++|+++.|.
T Consensus 141 ~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lf 219 (243)
T 3mbr_X 141 KVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLF 219 (243)
T ss_dssp ECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEE
T ss_pred EEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEE
Confidence 21 22 233455655 45666655 5789999999999999888732 2457899999877655
Q ss_pred Eee
Q psy2107 332 TAS 334 (391)
Q Consensus 332 ~g~ 334 (391)
+.+
T Consensus 220 VTG 222 (243)
T 3mbr_X 220 VTG 222 (243)
T ss_dssp EEE
T ss_pred EEC
Confidence 554
No 252
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.48 E-value=0.00023 Score=60.97 Aligned_cols=232 Identities=9% Similarity=0.018 Sum_probs=128.4
Q ss_pred CCcEEEEEecCCEEEEEECCCeEEEEcCCCceEEecc---CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCC
Q psy2107 116 DDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIP---GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN 192 (391)
Q Consensus 116 ~~~V~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~---~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 192 (391)
...+.++.|+++.++.++.+|.|..-.=.++.-.... .+.+.+..+.+.+ ++..++++ .+|.|..-. ....
T Consensus 79 ~~~~~~i~~~~~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~---~~~~~~~~-~~g~v~~S~--DgG~ 152 (327)
T 2xbg_A 79 DYRFNSVSFQGNEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALG---NGSAEMIT-NVGAIYRTK--DSGK 152 (327)
T ss_dssp CCEEEEEEEETTEEEEEEETTEEEEESSTTSSCEECCCCTTCSSCEEEEEEEE---TTEEEEEE-TTCCEEEES--STTS
T ss_pred CccEEEEEecCCeEEEEECCCeEEEECCCCCCceECccccCCCCCeEEEEEEC---CCCEEEEe-CCccEEEEc--CCCC
Confidence 4478899998665555666776554321222212111 2345577777743 45555544 566543321 2233
Q ss_pred ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEE-EECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee
Q psy2107 193 SIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKI-WSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL 271 (391)
Q Consensus 193 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~i-wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (391)
.+..+. ......+..+++.+++.+++.+. +|.+.. +|-. +.. ...+ -
T Consensus 153 tW~~~~--~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~g-G~t--------------------------W~~~--~ 200 (327)
T 2xbg_A 153 NWQALV--QEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPG-QTA--------------------------WEPH--N 200 (327)
T ss_dssp SEEEEE--CSCCCCEEEEEECTTSCEEEEET-TSSEEEEECTT-CSS--------------------------CEEE--E
T ss_pred CCEEee--cCCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCC-CCc--------------------------eeEC--C
Confidence 444432 34556789999999988776654 454443 3320 110 1111 1
Q ss_pred cCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEEC-----CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107 272 KGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG-----NKSFFDVHYSPLSKLVITASADKQIRLYDPKV 346 (391)
Q Consensus 272 ~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~ 346 (391)
......+..+.+.+++.++.++.+|.+++.+...++.-..+.. ...+.++++.+++.+++++. ++.|. +....
T Consensus 201 ~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i~-~S~Dg 278 (327)
T 2xbg_A 201 RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGALL-CSQDG 278 (327)
T ss_dssp CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCEE-EESST
T ss_pred CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeEE-EeCCC
Confidence 1234567788888778888888889888764222332222221 13578899998888777665 67663 33333
Q ss_pred CCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107 347 KEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 347 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 389 (391)
+...............+.++.|.+ ++ .++.++.+|.|.-++
T Consensus 279 G~tW~~~~~~~~~~~~~~~v~~~~-~~-~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 279 GQTWQQDVDVKKVPSNFYKILFFS-PD-QGFILGQKGILLRYV 319 (327)
T ss_dssp TSSCEECGGGTTSSSCCCEEEEEE-TT-EEEEECSTTEEEEEC
T ss_pred CcccEEcCccCCCCCCeEEEEEEC-CC-ceEEEcCCceEEEEc
Confidence 332221111112335678888875 44 466777889877654
No 253
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.46 E-value=0.00026 Score=68.46 Aligned_cols=237 Identities=7% Similarity=-0.019 Sum_probs=140.9
Q ss_pred CCcEEEEEec-CCEEEEEECCCeEEEEcCCCceEEecc---------------CCCCCeeEEEEEecCCCCeEEEEEeCC
Q psy2107 116 DDWVSAIDFH-NDWILTGCYDHSVHIWTRRGEHKLNIP---------------GHGGPVKGVAWLYNDGKDAAFISVSTD 179 (391)
Q Consensus 116 ~~~V~~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~---------------~~~~~v~~l~~~~~~~~~~~l~s~~~d 179 (391)
...|.++..+ ...|..|+..+-|.++|........+. -....|.++.. +.++. |..|+.+
T Consensus 257 ~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~---D~~g~-lWigt~~ 332 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQ---DSFNN-IWIGTWG 332 (781)
T ss_dssp CCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEE---CSSCC-EEEEEBS
T ss_pred CceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEE---eCCCC-EEEEecC
Confidence 3568898886 447777887556888887554333221 12456888877 55554 6667777
Q ss_pred CcEEEEeecCCCCceeEEEEE-------ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccc
Q psy2107 180 QTAMIWEWKVESNSIECIHVC-------RGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTS 252 (391)
Q Consensus 180 g~v~iwd~~~~~~~~~~~~~~-------~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 252 (391)
+.|..++.. .......... ......|.++...+++. |..|+.++-|..||..++....
T Consensus 333 ~Gl~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~------------ 397 (781)
T 3v9f_A 333 GGINFISNA--PPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIY------------ 397 (781)
T ss_dssp SCEEEECSS--CCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEEC------------
T ss_pred CeEEEeCCC--CCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEE------------
Confidence 788888843 2222222110 01235699999988876 5667766778889876432110
Q ss_pred cccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEE---CCeeeEEEEECCCCCE
Q psy2107 253 KKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIV---GNKSFFDVHYSPLSKL 329 (391)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~i~~~~~~p~~~~ 329 (391)
...........|.++...+++.|..|+.++-+..+|..+++...... ....|.++...++|.+
T Consensus 398 --------------~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l 463 (781)
T 3v9f_A 398 --------------NKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKI 463 (781)
T ss_dssp --------------C-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEE
T ss_pred --------------ccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCE
Confidence 00000123456888888877888889988889999987765432211 1347888888887765
Q ss_pred EEEeeCCCcEEEEcCCCCCcceEEEEec---cccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 330 VITASADKQIRLYDPKVKEGAIVKSTFS---SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 330 l~~g~~dg~i~iwd~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
.+ |+. +.|..||..+..-... .... .....|.++...+ ++.+. .|+.++-+..||.
T Consensus 464 wi-gt~-~Gl~~~~~~~~~~~~~-~~~~~~~~~~~~i~~i~~d~-~g~lW-igt~~~Gl~~~~~ 522 (781)
T 3v9f_A 464 WI-GTH-AGVFVIDLASKKVIHH-YDTSNSQLLENFVRSIAQDS-EGRFW-IGTFGGGVGIYTP 522 (781)
T ss_dssp EE-EET-TEEEEEESSSSSCCEE-ECTTTSSCSCSCEEEEEECT-TCCEE-EEESSSCEEEECT
T ss_pred EE-EEC-CceEEEeCCCCeEEec-ccCcccccccceeEEEEEcC-CCCEE-EEEcCCCEEEEeC
Confidence 54 444 5688999776442111 1111 1135799999988 44433 3444334555653
No 254
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.44 E-value=8.3e-05 Score=63.56 Aligned_cols=187 Identities=13% Similarity=0.039 Sum_probs=109.3
Q ss_pred CeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEec-----------------CCCCeEEEEEcC-CCCE
Q psy2107 157 PVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRG-----------------HERGLETVTVSE-SRQQ 218 (391)
Q Consensus 157 ~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-----------------~~~~v~~l~~~~-~~~~ 218 (391)
...+++| ++++.++.++..++.|..|+.. ............ ....+..+++.+ +++
T Consensus 20 ~p~~i~~---d~~g~~l~v~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~- 93 (322)
T 2fp8_A 20 APNSFTF---DSTNKGFYTSVQDGRVIKYEGP--NSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ- 93 (322)
T ss_dssp CCCCEEC---CTTCSSEEEECTTSEEEEECCT--TTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-
T ss_pred CceEEEE---cCCCCEEEEEcCCCeEEEECCC--CCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-
Confidence 3456778 6677777888889999999843 222222111000 013578899998 554
Q ss_pred EEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee-eecC-ccCcccEEEecc-CCeEEEEEC-
Q psy2107 219 FATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI-TLKG-HKEAISAVQWTA-VDEIITSSW- 294 (391)
Q Consensus 219 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~v~~~~~~~-~~~l~s~~~- 294 (391)
|+.+...+.|..+|..++... .+. ...+ .......+++.+ ++.++.+..
T Consensus 94 l~v~d~~~~i~~~d~~~g~~~---------------------------~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~ 146 (322)
T 2fp8_A 94 LYIVDCYYHLSVVGSEGGHAT---------------------------QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVS 146 (322)
T ss_dssp EEEEETTTEEEEECTTCEECE---------------------------EEESEETTEECSCEEEEEECTTTCCEEEEESC
T ss_pred EEEEECCCCEEEEeCCCCEEE---------------------------EecccCCCCcccccceEEEecCCCEEEEECCc
Confidence 555555556888886542210 000 0011 112356788888 777766653
Q ss_pred -----------------CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCc--ceEEE
Q psy2107 295 -----------------DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEG--AIVKS 354 (391)
Q Consensus 295 -----------------dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~--~~~~~ 354 (391)
++.|..||..+++.......-.....++++|+++.|..+ +..+.|.+|++..... .....
T Consensus 147 ~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~ 226 (322)
T 2fp8_A 147 TLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV 226 (322)
T ss_dssp SSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE
T ss_pred ccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE
Confidence 267888888766543332222345678999999866555 5568999999864221 11111
Q ss_pred EeccccCcEEEEEECCCCCCEEEEeeC
Q psy2107 355 TFSSHKEWVQSVRWSPIDPQLFVSASF 381 (391)
Q Consensus 355 ~~~~h~~~v~~~~~~~~~~~~l~s~~~ 381 (391)
. ..+ ...+++.++ +++.++...
T Consensus 227 ~---~~g-P~gi~~d~~-G~l~va~~~ 248 (322)
T 2fp8_A 227 K---IPN-PGNIKRNAD-GHFWVSSSE 248 (322)
T ss_dssp E---CSS-EEEEEECTT-SCEEEEEEE
T ss_pred e---CCC-CCCeEECCC-CCEEEEecC
Confidence 2 223 788999994 455555543
No 255
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.44 E-value=0.00058 Score=59.01 Aligned_cols=230 Identities=9% Similarity=-0.017 Sum_probs=133.8
Q ss_pred cEEEEEecCC-EEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeE
Q psy2107 118 WVSAIDFHND-WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIEC 196 (391)
Q Consensus 118 ~V~~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 196 (391)
..+|.+..++ +|+.+ ....|+..++.+.....+.........++|.+. ++.++++-...+.|..++++ ......
T Consensus 35 ~~~C~~~~~~~~ll~~-~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~--~~~ly~~D~~~~~I~r~~~~--g~~~~~ 109 (349)
T 3v64_C 35 RRSCKALGPEPVLLFA-NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHR--RELVFWSDVTLDRILRANLN--GSNVEE 109 (349)
T ss_dssp SSCEEESSSCCEEEEE-CBSCEEEECTTSCCEEEEECSCSCEEEEEEETT--TTEEEEEETTTTEEEEEETT--SCSCEE
T ss_pred CCcccccccCceeEee-cccceEEEeCCCCeeEEeecCCCceEEEEEecc--ccEEEEEeccCCceEEEecC--CCCceE
Confidence 3445555433 44433 345688888876555544444455789999432 55566666677888888743 322222
Q ss_pred EEEEecCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCcc
Q psy2107 197 IHVCRGHERGLETVTVSESRQ-QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHK 275 (391)
Q Consensus 197 ~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (391)
...........+++.+.+. ++++-...+.|.+.+++... ....+...-
T Consensus 110 --~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-----------------------------~~~l~~~~l 158 (349)
T 3v64_C 110 --VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-----------------------------RKVLLWQSL 158 (349)
T ss_dssp --EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-----------------------------CEEEECTTC
T ss_pred --EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc-----------------------------eEEEEeCCC
Confidence 2222234567899987544 44555566789998886421 111122222
Q ss_pred CcccEEEecc-CCeEEEEEC-C-CeEEEEecccCceeEEEE--CCeeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCc
Q psy2107 276 EAISAVQWTA-VDEIITSSW-D-HTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEG 349 (391)
Q Consensus 276 ~~v~~~~~~~-~~~l~s~~~-d-g~i~iwd~~~~~~~~~~~--~~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~ 349 (391)
.....++++| ++.++.+.. . +.|..+++... ....+. .-.....++++|++..|..+ ...+.|..+|+.....
T Consensus 159 ~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~ 237 (349)
T 3v64_C 159 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR 237 (349)
T ss_dssp SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce
Confidence 3457888885 566555543 3 67888877533 222322 12356789999876655544 4567899999865331
Q ss_pred ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107 350 AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 350 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 389 (391)
. ..+.........+++. ++.++++-...+.|...|
T Consensus 238 ~---~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 238 K---AVISQGLPHPFAITVF--EDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp E---EEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEE
T ss_pred E---EEEeCCCCCceEEEEE--CCEEEEecCCCCeEEEEE
Confidence 1 1222234456788883 456666666667776665
No 256
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.43 E-value=1.3e-05 Score=75.76 Aligned_cols=226 Identities=10% Similarity=0.049 Sum_probs=131.8
Q ss_pred EecCCEEEEEECCCeEEEEcC-CCceEEeccCCC----CCeeE-EEEEecCCCCeEEEEEeC------CCcEEEEeecCC
Q psy2107 123 DFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHG----GPVKG-VAWLYNDGKDAAFISVST------DQTAMIWEWKVE 190 (391)
Q Consensus 123 ~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~----~~v~~-l~~~~~~~~~~~l~s~~~------dg~v~iwd~~~~ 190 (391)
++.++.++.++.||.|..+|. +++.+....... ..+.+ ... .++ .++.+.. +|.|..+|..
T Consensus 114 ~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v----~~~-~v~vg~~~~~~~~~g~v~a~D~~-- 186 (668)
T 1kv9_A 114 ALWGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV----VKG-KVIIGNGGAEYGVRGFVSAYDAD-- 186 (668)
T ss_dssp EEEBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE----ETT-EEEECCBCTTTCCBCEEEEEETT--
T ss_pred EEECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE----ECC-EEEEeCCCCCcCCCCEEEEEECC--
Confidence 445778889999999999998 677776654321 11111 111 033 3444432 5889999854
Q ss_pred CCceeEEEEEecC-------------------------------CCCeEEEEEcCCCCEEEEEeCCCc------------
Q psy2107 191 SNSIECIHVCRGH-------------------------------ERGLETVTVSESRQQFATGGWDCL------------ 227 (391)
Q Consensus 191 ~~~~~~~~~~~~~-------------------------------~~~v~~l~~~~~~~~l~sg~~dg~------------ 227 (391)
+.+.+..+... ......+++.|...+++.++.++.
T Consensus 187 --tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~g 264 (668)
T 1kv9_A 187 --TGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGG 264 (668)
T ss_dssp --TCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCC
T ss_pred --CCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCC
Confidence 33444444311 011124688888888888877663
Q ss_pred -------EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC--cc-------CcccEEEeccCC----
Q psy2107 228 -------LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG--HK-------EAISAVQWTAVD---- 287 (391)
Q Consensus 228 -------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~v~~~~~~~~~---- 287 (391)
|..+|.++++.. ..+.. |. .+.....+..++
T Consensus 265 d~l~~~~v~AlD~~tG~~~-----------------------------W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~ 315 (668)
T 1kv9_A 265 DNLYLSSILAIRPDTGKLA-----------------------------WHYQVTPGDSWDFTATQQITLAELNIDGKPRK 315 (668)
T ss_dssp CCTTTTEEEEECTTTCCEE-----------------------------EEEESSTTCCSCCCCCSCEEEEEEEETTEEEE
T ss_pred CceeeeeEEEEcCCCCcee-----------------------------eEeecCCCccccccCCCCcEEEEeccCCcEEE
Confidence 777887775532 22211 11 111111111123
Q ss_pred eEEEEECCCeEEEEecccCceeEEEECCe-------------ee------------------------EEEEECCCCCEE
Q psy2107 288 EIITSSWDHTLKIWDAELGGMKSEIVGNK-------------SF------------------------FDVHYSPLSKLV 330 (391)
Q Consensus 288 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------------~i------------------------~~~~~~p~~~~l 330 (391)
.++.++.+|.+.++|..+|+.+....... ++ ..++++|+..++
T Consensus 316 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~ 395 (668)
T 1kv9_A 316 VLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLV 395 (668)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEE
T ss_pred EEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEE
Confidence 48888999999999999999885543221 01 125677776655
Q ss_pred EEe------------------------------------eCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCC
Q psy2107 331 ITA------------------------------------SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQ 374 (391)
Q Consensus 331 ~~g------------------------------------~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 374 (391)
... ..+|.|..||+.+++ .+.....+ .++....+.. .+.
T Consensus 396 yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~---~~W~~~~~-~~~~~~~~~t-~gg 470 (668)
T 1kv9_A 396 YIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQK---AAWKVPYP-THWNGGTLST-AGN 470 (668)
T ss_dssp EEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTE---EEEEEEES-SSCCCCEEEE-TTT
T ss_pred EEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCc---EEEEccCC-CCCcCceeEe-CCC
Confidence 431 124789999998866 44333322 2233333333 344
Q ss_pred EEEEeeCCCcEEEEecC
Q psy2107 375 LFVSASFDNSVKLWDLR 391 (391)
Q Consensus 375 ~l~s~~~dg~v~iwdlr 391 (391)
+++.++.||.++.||.+
T Consensus 471 ~vf~g~~dg~l~a~d~~ 487 (668)
T 1kv9_A 471 LVFQGTAAGQMHAYSAD 487 (668)
T ss_dssp EEEEECTTSEEEEEETT
T ss_pred EEEEECCcccchhhhhh
Confidence 68888999999999964
No 257
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.41 E-value=2.4e-05 Score=71.01 Aligned_cols=240 Identities=7% Similarity=-0.015 Sum_probs=137.4
Q ss_pred cCCEEEEEEC-CCeEEEEcCCCceEE---eccCCCCCeeEEEEEecC-CCCeEEEEEe------------------CCCc
Q psy2107 125 HNDWILTGCY-DHSVHIWTRRGEHKL---NIPGHGGPVKGVAWLYND-GKDAAFISVS------------------TDQT 181 (391)
Q Consensus 125 ~~~~l~t~~~-dg~i~iwd~~~~~~~---~~~~~~~~v~~l~~~~~~-~~~~~l~s~~------------------~dg~ 181 (391)
+|++++.... ++.|.+.|+...++. .++ .......+++. + |++.++++++ .++.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip-~g~~phg~~~~--~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIP-NAKGIHGLRPQ--KWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECS-SCCSEEEEEEC--CSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCC-CCCCCcceeee--ecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 4666666554 567999999665433 332 23456777763 2 5777777774 2457
Q ss_pred EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC---------------cEEEEECCCCCCCCCCCCCC
Q psy2107 182 AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC---------------LLKIWSADISKERGDPSENG 246 (391)
Q Consensus 182 v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg---------------~i~iwd~~~~~~~~~~~~~~ 246 (391)
+.+.|.. +.+...++.--. ....++++|+|+++++.+.+. .|.+.|......... .+
T Consensus 177 vtvID~~----t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~---~G 248 (595)
T 1fwx_A 177 FTAVDAD----KWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIA---AG 248 (595)
T ss_dssp EEEEETT----TTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHH---HT
T ss_pred EEEEECC----CCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEecc---CC
Confidence 7888843 334444444212 356788999999999888653 356666433211000 00
Q ss_pred CCCccccccccccccCCC--CCc-eeeecCccCcccEEEeccCCe--EEEEECCCeEEEEecccCc------------ee
Q psy2107 247 DEGTTSKKRKKEYSSASS--RTP-LITLKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGG------------MK 309 (391)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~v~~~~~~~~~~--l~s~~~dg~i~iwd~~~~~------------~~ 309 (391)
.... .......+... .+. +..+.. .....++.++|++. ++++..+.+|.++|+.+.+ ..
T Consensus 249 k~~~---i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~ 324 (595)
T 1fwx_A 249 DYQE---LNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVV 324 (595)
T ss_dssp CSEE---ETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEE
T ss_pred CeeE---ECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceE
Confidence 0000 00011112222 222 333332 23457889998776 3344468899999998653 34
Q ss_pred EEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC-------CcceEEEEeccccCcE-----EEEEECCCCCCEEE
Q psy2107 310 SEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK-------EGAIVKSTFSSHKEWV-----QSVRWSPIDPQLFV 377 (391)
Q Consensus 310 ~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~-------~~~~~~~~~~~h~~~v-----~~~~~~~~~~~~l~ 377 (391)
...........++|+|+|...++...|+.|.+||+... +....+..+..|-.+- .++.++| ++++|+
T Consensus 325 ~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~-DGk~l~ 403 (595)
T 1fwx_A 325 AEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDA-TNDWLV 403 (595)
T ss_dssp ECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTC-CSSEEE
T ss_pred EEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCC-CCCEEE
Confidence 44455557889999999955556677999999998651 1123566666554321 1224578 445566
Q ss_pred Eee
Q psy2107 378 SAS 380 (391)
Q Consensus 378 s~~ 380 (391)
++.
T Consensus 404 ~~N 406 (595)
T 1fwx_A 404 CLS 406 (595)
T ss_dssp EEE
T ss_pred EcC
Confidence 554
No 258
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.38 E-value=0.0009 Score=64.70 Aligned_cols=235 Identities=9% Similarity=-0.001 Sum_probs=142.3
Q ss_pred CCCcEEEEEec-CCEEEEEECCCeEEEEcCCCceEEeccC----------CCCCeeEEEEEecCCCCeEEEEEeCCCcEE
Q psy2107 115 HDDWVSAIDFH-NDWILTGCYDHSVHIWTRRGEHKLNIPG----------HGGPVKGVAWLYNDGKDAAFISVSTDQTAM 183 (391)
Q Consensus 115 h~~~V~~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~----------~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~ 183 (391)
....|.++..+ ...|-.|+.++-|..++........+.. ....|.++.. +.++. |..|+.++.|.
T Consensus 311 ~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~---d~~g~-lWigt~~~Gl~ 386 (781)
T 3v9f_A 311 SNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCD---DGQGK-LWIGTDGGGIN 386 (781)
T ss_dssp SSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEE---CTTSC-EEEEEBSSCEE
T ss_pred CCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEE---cCCCC-EEEEeCCCcEE
Confidence 34579999887 3466678877778889885444333311 2356888877 55554 55667667788
Q ss_pred EEeecCCCCceeEEE-EEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107 184 IWEWKVESNSIECIH-VCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA 262 (391)
Q Consensus 184 iwd~~~~~~~~~~~~-~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (391)
.|+.. ........ ........|.++...+++. |..|+.++-|..+|..+++...
T Consensus 387 ~~~~~--~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~---------------------- 441 (781)
T 3v9f_A 387 VFENG--KRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQI---------------------- 441 (781)
T ss_dssp EEETT--EEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEE----------------------
T ss_pred EEECC--CCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEE----------------------
Confidence 88832 11111110 0012346789999888886 5557776778888876533210
Q ss_pred CCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEEC------CeeeEEEEECCCCCEEEEeeCC
Q psy2107 263 SSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG------NKSFFDVHYSPLSKLVITASAD 336 (391)
Q Consensus 263 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~i~~~~~~p~~~~l~~g~~d 336 (391)
..........|.++...+++.+..|+. +-|..||..+++....... ...+.++...++|.+.+. +.+
T Consensus 442 -----~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~ 514 (781)
T 3v9f_A 442 -----IELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFG 514 (781)
T ss_dssp -----CCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESS
T ss_pred -----eccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEE-EcC
Confidence 000011345688888887888888887 5688999887665443322 246888999988876654 444
Q ss_pred CcEEEEcCCCCCcceEEEEecc---ccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 337 KQIRLYDPKVKEGAIVKSTFSS---HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 337 g~i~iwd~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
+.+..||..... ....... ....|.++...+ ++.+.+ ++.+|.|..||.
T Consensus 515 ~Gl~~~~~~~~~---~~~~~~~~~l~~~~i~~i~~d~-~g~lWi-~T~~Glv~~~d~ 566 (781)
T 3v9f_A 515 GGVGIYTPDMQL---VRKFNQYEGFCSNTINQIYRSS-KGQMWL-ATGEGLVCFPSA 566 (781)
T ss_dssp SCEEEECTTCCE---EEEECTTTTCSCSCEEEEEECT-TSCEEE-EETTEEEEESCT
T ss_pred CCEEEEeCCCCe---EEEccCCCCCCCCeeEEEEECC-CCCEEE-EECCCceEEECC
Confidence 457889876543 2221111 235689999888 445443 344665466653
No 259
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.35 E-value=6.2e-05 Score=69.66 Aligned_cols=98 Identities=18% Similarity=0.062 Sum_probs=63.7
Q ss_pred EEEEECCCeEEEEecccCceeEEEECCe--------------ee--------------------------EEEEECCCCC
Q psy2107 289 IITSSWDHTLKIWDAELGGMKSEIVGNK--------------SF--------------------------FDVHYSPLSK 328 (391)
Q Consensus 289 l~s~~~dg~i~iwd~~~~~~~~~~~~~~--------------~i--------------------------~~~~~~p~~~ 328 (391)
++.++.+|.+.++|..+|+.+....... ++ ..++++|+..
T Consensus 319 v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g 398 (571)
T 2ad6_A 319 LSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR 398 (571)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT
T ss_pred EEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC
Confidence 6678889999999999999887765321 11 2356778777
Q ss_pred EEEEee-------------------------------------CCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCC
Q psy2107 329 LVITAS-------------------------------------ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI 371 (391)
Q Consensus 329 ~l~~g~-------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 371 (391)
++++.. .+|.|..||+.+++ .+..... ...+.+......
T Consensus 399 ~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~---~~W~~~~-~~~~~~~~~~t~ 474 (571)
T 2ad6_A 399 TLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGK---AKWTKWE-KFAAWGGTLYTK 474 (571)
T ss_dssp EEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCC---EEEEEEE-SSCCCSBCEEET
T ss_pred EEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCC---EEEEecC-CCCccceeEEEC
Confidence 666543 34789999988766 4333332 122222222222
Q ss_pred CCCEEEEeeCCCcEEEEecC
Q psy2107 372 DPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 372 ~~~~l~s~~~dg~v~iwdlr 391 (391)
++ +++.++.||.|+.||.+
T Consensus 475 gg-~v~~g~~dg~l~a~D~~ 493 (571)
T 2ad6_A 475 GG-LVWYATLDGYLKALDNK 493 (571)
T ss_dssp TT-EEEEECTTSEEEEEETT
T ss_pred CC-EEEEEcCCCeEEEEECC
Confidence 44 56668899999999964
No 260
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.33 E-value=0.0013 Score=57.68 Aligned_cols=228 Identities=9% Similarity=0.000 Sum_probs=132.1
Q ss_pred EEEEecCC-EEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEE
Q psy2107 120 SAIDFHND-WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIH 198 (391)
Q Consensus 120 ~~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 198 (391)
+|.+.... +|+.+ ....|+..++.+.....+.........++|.+. .+.++++-...+.|..++++ ..... .
T Consensus 80 ~C~~~~~~~~l~~~-~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~--~~~ly~~D~~~~~I~r~~~~--g~~~~--~ 152 (386)
T 3v65_B 80 SCKALGPEPVLLFA-NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHR--RELVFWSDVTLDRILRANLN--GSNVE--E 152 (386)
T ss_dssp CEEECSSCCEEEEE-CBSCEEEECTTSCCCEEEECSCSCEEEEEEETT--TTEEEEEETTTTEEEEEETT--SCCEE--E
T ss_pred eECCccccceeEee-cCccceeeccCCCcEEEEecCCCccEEEEEecC--CCeEEEEeCCCCcEEEEecC--CCCcE--E
Confidence 34444433 44433 446788888866555544444456789999432 55666666677888888743 32221 2
Q ss_pred EEecCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCc
Q psy2107 199 VCRGHERGLETVTVSESRQQF-ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEA 277 (391)
Q Consensus 199 ~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (391)
.+.........+++.+.+..| ++-...+.|.+.+++... ....+...-..
T Consensus 153 ~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~-----------------------------~~~l~~~~l~~ 203 (386)
T 3v65_B 153 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-----------------------------RKVLLWQSLEK 203 (386)
T ss_dssp EECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS-----------------------------CEEEECSSCSC
T ss_pred EEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc-----------------------------eEEeecCCCCC
Confidence 222223355778888754444 555556778877765311 11112222244
Q ss_pred ccEEEecc-CCeEEEEEC-C-CeEEEEecccCceeEEEEC--CeeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCcce
Q psy2107 278 ISAVQWTA-VDEIITSSW-D-HTLKIWDAELGGMKSEIVG--NKSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEGAI 351 (391)
Q Consensus 278 v~~~~~~~-~~~l~s~~~-d-g~i~iwd~~~~~~~~~~~~--~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~ 351 (391)
...+++.| ++.|+.+.. . +.|..+++... ....+.. -.....++++|++..|..+ +..+.|..+|+.....
T Consensus 204 P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~-- 280 (386)
T 3v65_B 204 PRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-- 280 (386)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC--
T ss_pred CcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee--
Confidence 57788884 566655543 3 67888887543 3333322 2256789999876655544 4567899999864331
Q ss_pred EEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107 352 VKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 352 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 389 (391)
...+.........|++. ++.++++-...+.|..+|
T Consensus 281 -~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 281 -KAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp -EEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEE
T ss_pred -EEEEECCCCCceEEEEE--CCEEEEeeCCCCeEEEEE
Confidence 11222234456788883 456777776777777766
No 261
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.28 E-value=0.0017 Score=57.14 Aligned_cols=227 Identities=9% Similarity=-0.042 Sum_probs=133.5
Q ss_pred EEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCe
Q psy2107 128 WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGL 207 (391)
Q Consensus 128 ~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v 207 (391)
+|+.+. ...|+..++.+.....+......+..++|.+. ++.++++-...+.|..+++............+.......
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~--~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEECSCSCEEEEEEETT--TTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred eeEEec-cceeEEEccCCcceeEeccccCcceEEeeeec--cCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 444443 46888889866555544455667889999432 455666666678888887542110011122233334567
Q ss_pred EEEEEcCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-
Q psy2107 208 ETVTVSES-RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA- 285 (391)
Q Consensus 208 ~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~- 285 (391)
..+++.+. +++.++-...+.|.+.+++... ....+...-.....+++.|
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~-----------------------------~~~l~~~~~~~P~~iavdp~ 212 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-----------------------------RKTLFRENGSKPRAIVVDPV 212 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCS-----------------------------EEEEEECSSCCEEEEEEETT
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCc-----------------------------eEEEEeCCCCCcceEEEecc
Confidence 88999984 4445555567788888876421 1112222233457888885
Q ss_pred CCeEEEEEC--CCeEEEEecccCceeEEEECC-eeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCcceEEEEeccccC
Q psy2107 286 VDEIITSSW--DHTLKIWDAELGGMKSEIVGN-KSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEGAIVKSTFSSHKE 361 (391)
Q Consensus 286 ~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~h~~ 361 (391)
.+.|+.+.. .+.|...++............ .....+++++++..|..+ ...+.|..+|+...... .+......-.
T Consensus 213 ~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~-~~~~~~~~l~ 291 (400)
T 3p5b_L 213 HGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK-TILEDEKRLA 291 (400)
T ss_dssp TTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCE-EEEECSSTTS
T ss_pred cCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccE-EEEeCCCCCC
Confidence 566666543 367888887643332222222 367889999887766655 44678999998654322 2222212234
Q ss_pred cEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107 362 WVQSVRWSPIDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 362 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd 389 (391)
...+++.. ++.++++-...+.|..+|
T Consensus 292 ~P~gl~v~--~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 292 HPFSLAVF--EDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp SEEEEEEE--TTEEEEEESSSCSEEEEE
T ss_pred CCEEEEEe--CCEEEEecCCCCeEEEEE
Confidence 45677773 456777777777887776
No 262
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.27 E-value=0.00018 Score=67.98 Aligned_cols=61 Identities=18% Similarity=0.174 Sum_probs=47.0
Q ss_pred CCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec
Q psy2107 294 WDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS 357 (391)
Q Consensus 294 ~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~ 357 (391)
.+|.|..||+.+++.+.......+.....+...+.++++|+.|+.++.||.++++ .+..+.
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~---~l~~~~ 496 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGE---ALWQFE 496 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC---EEEEEE
T ss_pred ccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcCh---hheEec
Confidence 3588999999999998887765554444444568889999999999999998876 554444
No 263
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.25 E-value=0.00012 Score=69.30 Aligned_cols=236 Identities=12% Similarity=0.143 Sum_probs=121.9
Q ss_pred cCCEEEEEECCC-----------eEEEEcCCCceE---Eecc-CCCCCeeEEEEEecCCCCeEEEEEeC-CCcEEEEeec
Q psy2107 125 HNDWILTGCYDH-----------SVHIWTRRGEHK---LNIP-GHGGPVKGVAWLYNDGKDAAFISVST-DQTAMIWEWK 188 (391)
Q Consensus 125 ~~~~l~t~~~dg-----------~i~iwd~~~~~~---~~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~-dg~v~iwd~~ 188 (391)
.+++++.|+.++ .+.+||.....- ..+. .+.....++++ ..++.+++.|+. +..+.+||..
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~---~~~g~lyv~GG~~~~~v~~yd~~ 273 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISM---DGNGQIVVTGGNDAKKTSLYDSS 273 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEE---CTTSCEEEECSSSTTCEEEEEGG
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccC---CCCCCEEEeCCCCCCceEEecCc
Confidence 466778877543 688999844322 2221 23333445666 557888888884 4678999854
Q ss_pred CCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe-CC-----CcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107 189 VESNSIECIHVCRGHERGLETVTVSESRQQFATGG-WD-----CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA 262 (391)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (391)
...+..+..+.... .-.+++..+++++++.|+ .+ ..+.+||..+.+-.......
T Consensus 274 --t~~W~~~~~~~~~R-~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~----------------- 333 (656)
T 1k3i_A 274 --SDSWIPGPDMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAK----------------- 333 (656)
T ss_dssp --GTEEEECCCCSSCC-SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSC-----------------
T ss_pred --CCceeECCCCCccc-cccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcc-----------------
Confidence 44444443332222 223455667899999998 34 56889998764321100000
Q ss_pred CCCCceee-----ecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe----------eeEEEEEC-CC
Q psy2107 263 SSRTPLIT-----LKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK----------SFFDVHYS-PL 326 (391)
Q Consensus 263 ~~~~~~~~-----~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----------~i~~~~~~-p~ 326 (391)
..+... ...+...+..+... ++.++.......+..||..+........... .-.++.+. .+
T Consensus 334 --~~p~~~~~~~~~~~~~~~iyv~Gg~-~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~ 410 (656)
T 1k3i_A 334 --VNPMLTADKQGLYRSDNHAWLFGWK-KGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVK 410 (656)
T ss_dssp --SGGGCCCCTTGGGTTTCSCCEEECG-GGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTT
T ss_pred --ccccccccccceeecCCceEEEECC-CCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCC
Confidence 000000 00011111111111 1122222234567888988765433322111 12333343 36
Q ss_pred CCEEEEeeCCC-----------cEEEEcCCCCCcceEEEEe--ccccCc-EEEEEECCCCCCEEEEeeCC----------
Q psy2107 327 SKLVITASADK-----------QIRLYDPKVKEGAIVKSTF--SSHKEW-VQSVRWSPIDPQLFVSASFD---------- 382 (391)
Q Consensus 327 ~~~l~~g~~dg-----------~i~iwd~~~~~~~~~~~~~--~~h~~~-v~~~~~~~~~~~~l~s~~~d---------- 382 (391)
+++++.|+.++ .|.+||..+.. ..... .-+... -.+++..| ++++++.||.+
T Consensus 411 ~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~---W~~~~~~~mp~~R~~~~~~~l~-~g~i~v~GG~~~~~~~~~~~~ 486 (656)
T 1k3i_A 411 GKILTFGGSPDYQDSDATTNAHIITLGEPGTSP---NTVFASNGLYFARTFHTSVVLP-DGSTFITGGQRRGIPFEDSTP 486 (656)
T ss_dssp TEEEEECCBSSSSSSBCCCCEEEEECCSTTSCC---EEEECTTCCSSCCBSCEEEECT-TSCEEEECCBSBCCTTCCCSB
T ss_pred CeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCC---eeEEccCCCCCCcccCCeEECC-CCCEEEECCcccCcCcCCCCc
Confidence 77888887542 67888877654 21111 111122 23445667 66788888865
Q ss_pred -CcEEEEec
Q psy2107 383 -NSVKLWDL 390 (391)
Q Consensus 383 -g~v~iwdl 390 (391)
..+.+||.
T Consensus 487 ~~~v~~ydp 495 (656)
T 1k3i_A 487 VFTPEIYVP 495 (656)
T ss_dssp CCCCEEEEG
T ss_pred ccceEEEcC
Confidence 46788885
No 264
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.24 E-value=0.0016 Score=55.29 Aligned_cols=219 Identities=10% Similarity=-0.049 Sum_probs=126.9
Q ss_pred CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC
Q psy2107 136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES 215 (391)
Q Consensus 136 g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 215 (391)
..|+..|+.+.....+.........++|.+. .+.++++-..++.|..++++...........+.........+++.+.
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~--~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~ 87 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 87 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETT--TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeC--CCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec
Confidence 4688888865444433334556788999432 45566666677889888854210000111122222345678999875
Q ss_pred CC-EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEEEEE
Q psy2107 216 RQ-QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITSS 293 (391)
Q Consensus 216 ~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~ 293 (391)
+. +.++-...+.|.+.+.+... ....+...-.....++++| ++.++.+.
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~g~~-----------------------------~~~~~~~~~~~P~~iavdp~~g~ly~~d 138 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKGVK-----------------------------RKTLFRENGSKPRAIVVDPVHGFMYWTD 138 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSSS-----------------------------EEEEEECTTCCEEEEEEETTTTEEEEEE
T ss_pred CCeEEEEECCCCEEEEEeCCCCc-----------------------------eEEEEECCCCCcceEEeCCCCCEEEEEc
Confidence 44 44555667889999885411 1111222223457888885 66666655
Q ss_pred CC--CeEEEEecccCceeEEEEC--CeeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEE
Q psy2107 294 WD--HTLKIWDAELGGMKSEIVG--NKSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRW 368 (391)
Q Consensus 294 ~d--g~i~iwd~~~~~~~~~~~~--~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~ 368 (391)
.. +.|...++. +.....+.. -.....++++|++..|..+ +..+.|..+|+.... ...+............+++
T Consensus 139 ~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav 216 (316)
T 1ijq_A 139 WGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAV 216 (316)
T ss_dssp CSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEE
T ss_pred cCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEE
Confidence 43 678888775 443333322 2356789999887666554 456789999986433 2222222122344678888
Q ss_pred CCCCCCEEEEeeCCCcEEEEe
Q psy2107 369 SPIDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 369 ~~~~~~~l~s~~~dg~v~iwd 389 (391)
. ++.++++-...+.|..+|
T Consensus 217 ~--~~~ly~~d~~~~~V~~~~ 235 (316)
T 1ijq_A 217 F--EDKVFWTDIINEAIFSAN 235 (316)
T ss_dssp E--TTEEEEEETTTTEEEEEE
T ss_pred E--CCEEEEEECCCCeEEEEe
Confidence 4 456677776777787776
No 265
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.19 E-value=0.00037 Score=64.57 Aligned_cols=27 Identities=7% Similarity=0.043 Sum_probs=23.1
Q ss_pred eEEEEECCCeEEEEecccCceeEEEEC
Q psy2107 288 EIITSSWDHTLKIWDAELGGMKSEIVG 314 (391)
Q Consensus 288 ~l~s~~~dg~i~iwd~~~~~~~~~~~~ 314 (391)
.++.++.+|.++++|..+|+.+..+..
T Consensus 338 ~v~~~~~~G~l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 338 ATAHADRNGFFYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred EEEEECCCceEEEEECCCCCEeccccc
Confidence 577889999999999999998877654
No 266
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.12 E-value=0.0023 Score=54.30 Aligned_cols=191 Identities=10% Similarity=0.107 Sum_probs=120.3
Q ss_pred ecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC----CC---EEEEEe-C--CCcEEEEECC
Q psy2107 165 YNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES----RQ---QFATGG-W--DCLLKIWSAD 234 (391)
Q Consensus 165 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~----~~---~l~sg~-~--dg~i~iwd~~ 234 (391)
|.++...+++.....+.+.+||+ ..+.+..+.. +.+..+..-|+ ++ ++++.. . +++|.+|+++
T Consensus 35 ~~dp~~s~ii~t~k~~gL~Vydl-----~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iD 107 (355)
T 3amr_A 35 PKTPQNSKLITTNKKSGLVVYSL-----DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAID 107 (355)
T ss_dssp SSCGGGCEEEEEETTTEEEEEET-----TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEEC
T ss_pred CCCCCccEEEEEcCCCCEEEEcC-----CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEEC
Confidence 54555667777778889999995 2244555542 56677776663 22 223333 3 5789999874
Q ss_pred CCCCCCCCCCCCCCCccccccccccccCCCCCceeeec-------CccCcccEEEe--cc-CC--eEEEEECCCeEEEEe
Q psy2107 235 ISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK-------GHKEAISAVQW--TA-VD--EIITSSWDHTLKIWD 302 (391)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~--~~-~~--~l~s~~~dg~i~iwd 302 (391)
.... .+..+. ..-..+..+++ ++ .+ ++++...+|.+..|+
T Consensus 108 p~~~----------------------------~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~ 159 (355)
T 3amr_A 108 GKNG----------------------------TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYE 159 (355)
T ss_dssp TTTC----------------------------CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEE
T ss_pred CCCC----------------------------ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEE
Confidence 2110 111111 11144556666 54 34 477888899999999
Q ss_pred cc-------cCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC--cceEEEEec-cc-cCcEEEEEEC--
Q psy2107 303 AE-------LGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE--GAIVKSTFS-SH-KEWVQSVRWS-- 369 (391)
Q Consensus 303 ~~-------~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~~~-~h-~~~v~~~~~~-- 369 (391)
+. +.+.++++.....+..|+..+....|..+-++..|..++.+... ...++.... ++ ...+..|+.-
T Consensus 160 l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~ 239 (355)
T 3amr_A 160 LKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYA 239 (355)
T ss_dssp EEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEEC
T ss_pred EEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEec
Confidence 83 44677888888888899999998999999888777777754222 223444442 22 2368888884
Q ss_pred CCCC-CEEEEeeCCCcEEEEec
Q psy2107 370 PIDP-QLFVSASFDNSVKLWDL 390 (391)
Q Consensus 370 ~~~~-~~l~s~~~dg~v~iwdl 390 (391)
+++. ++++|+-.+++..+||.
T Consensus 240 ~~g~gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 240 ADGKGYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp GGGCEEEEEEEGGGTEEEEEES
T ss_pred CCCCEEEEEEcCCCCEEEEEEC
Confidence 4333 45666656789999986
No 267
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.08 E-value=0.0011 Score=55.58 Aligned_cols=160 Identities=7% Similarity=0.089 Sum_probs=104.9
Q ss_pred EecCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC-----
Q psy2107 200 CRGHERGLETVTVSESRQQFATGG-WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG----- 273 (391)
Q Consensus 200 ~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 273 (391)
+.....--.+++|++....|..++ ..+.|..||...+... .+ .+.+
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~---------------------------~~-~~~~~s~~g 59 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHF---------------------------NV-VIDGASSNG 59 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEE---------------------------EE-CCTTTCCSS
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEE---------------------------EE-ecCCccccC
Confidence 334445567889988666666666 6899999998643210 01 1111
Q ss_pred -ccCcccEEEe---ccCCeEEEEEC--------------CCeEEEEecc---cCceeEEEECC--------------eee
Q psy2107 274 -HKEAISAVQW---TAVDEIITSSW--------------DHTLKIWDAE---LGGMKSEIVGN--------------KSF 318 (391)
Q Consensus 274 -~~~~v~~~~~---~~~~~l~s~~~--------------dg~i~iwd~~---~~~~~~~~~~~--------------~~i 318 (391)
....+..+.| .+.++|+++.. +..|..||+. +++.+...... ...
T Consensus 60 ~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~ 139 (334)
T 2p9w_A 60 DGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGV 139 (334)
T ss_dssp CCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEE
T ss_pred CCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCC
Confidence 0113468888 56677665433 5789999999 88877766532 258
Q ss_pred EEEEECCCCCEEEEeeCC-CcEEEEcCCCCCcceEEEEe-----ccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107 319 FDVHYSPLSKLVITASAD-KQIRLYDPKVKEGAIVKSTF-----SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 319 ~~~~~~p~~~~l~~g~~d-g~i~iwd~~~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr 391 (391)
..++..++|+..++++.. +.|..++..... ..... .......+.|+++|++ ++|+....+|.+..+|++
T Consensus 140 nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~---~~~~~~~~~~~~~~~G~nGIv~~pdg-~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 140 VQSAQDRDGNSYVAFALGMPAIARVSADGKT---VSTFAWESGNGGQRPGYSGITFDPHS-NKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EEEEECTTSCEEEEEEESSCEEEEECTTSCC---EEEEEECCCCSSSCCSCSEEEEETTT-TEEEEESSSSSEEEEECS
T ss_pred ceeEECCCCCEEEeCCCCCCeEEEEeCCCCE---EeeeeecCCCcccccCcceEEEeCCC-CEEEEEcCCCeEEEEcCC
Confidence 899999999999988888 888888865432 22111 1122246799999955 445555449999999864
No 268
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.06 E-value=0.00066 Score=62.81 Aligned_cols=61 Identities=16% Similarity=0.055 Sum_probs=44.5
Q ss_pred CCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec
Q psy2107 294 WDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS 357 (391)
Q Consensus 294 ~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~ 357 (391)
.+|.|..||+.+++.+..+.....+....+...+..++.++.|+.|+.||.++++ .+..+.
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~---~lw~~~ 502 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGK---ELWNFK 502 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCC---EEEEEE
T ss_pred CCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCC---EEEEEe
Confidence 3578999999999998887755443333333346777788999999999998876 444443
No 269
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.06 E-value=0.0011 Score=61.47 Aligned_cols=26 Identities=12% Similarity=0.040 Sum_probs=21.9
Q ss_pred eEEEEECCCeEEEEecccCceeEEEE
Q psy2107 288 EIITSSWDHTLKIWDAELGGMKSEIV 313 (391)
Q Consensus 288 ~l~s~~~dg~i~iwd~~~~~~~~~~~ 313 (391)
.++.++.+|.+.++|.++|+.+....
T Consensus 325 ~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 325 LLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCcEEEEEECCCCCEeeccc
Confidence 36668899999999999999887665
No 270
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.05 E-value=0.006 Score=54.29 Aligned_cols=233 Identities=10% Similarity=0.084 Sum_probs=136.0
Q ss_pred EEEEEecC----CEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC---Cc-EEEEeecCC
Q psy2107 119 VSAIDFHN----DWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD---QT-AMIWEWKVE 190 (391)
Q Consensus 119 V~~~~~~~----~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d---g~-v~iwd~~~~ 190 (391)
-..+++++ ..|+.+...+.|+.+|.....+..+.........+++ ++++.++++.... .. +...+. .
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giav---d~dG~lyVad~~~~~~~~gv~~~~~--~ 215 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNF---TLNGDMVVVDDQSSDTNTGIYLFTR--A 215 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEE---CTTCCEEEEECCSCTTSEEEEEECG--G
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEE---CCCCCEEEEcCCCCcccceEEEEEC--C
Confidence 44677773 4565555548899999966666666555666889999 7788855554321 11 222221 1
Q ss_pred CCceeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107 191 SNSIECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI 269 (391)
Q Consensus 191 ~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (391)
. .......+. .......++++| ++.++++-..++.|+.+|..++... ..+.
T Consensus 216 ~-~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~--------------------------~~~~ 267 (433)
T 4hw6_A 216 S-GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLT--------------------------EEEV 267 (433)
T ss_dssp G-TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEE--------------------------EEEE
T ss_pred C-Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEE--------------------------EEEe
Confidence 1 111011111 234456788999 6776666556788888888643210 0011
Q ss_pred eecCccCcccEEEeccCCe-EEEE-ECCCeEEEEecc--cCce--eEEEECC----------------eeeEEEEE----
Q psy2107 270 TLKGHKEAISAVQWTAVDE-IITS-SWDHTLKIWDAE--LGGM--KSEIVGN----------------KSFFDVHY---- 323 (391)
Q Consensus 270 ~~~~~~~~v~~~~~~~~~~-l~s~-~~dg~i~iwd~~--~~~~--~~~~~~~----------------~~i~~~~~---- 323 (391)
.. +....-..+++++++. |+.+ ...+.|+.++.. ++.. ...+... .....+++
T Consensus 268 ~~-~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~ 346 (433)
T 4hw6_A 268 MM-DTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNE 346 (433)
T ss_dssp EC-SCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECG
T ss_pred cc-CCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccc
Confidence 11 1112223699997664 5555 456789997765 2321 1122111 12566888
Q ss_pred -----CCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc------------------cCcEEEEEECCCCCCEEEEee
Q psy2107 324 -----SPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH------------------KEWVQSVRWSPIDPQLFVSAS 380 (391)
Q Consensus 324 -----~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h------------------~~~v~~~~~~~~~~~~l~s~~ 380 (391)
.++|.++++-...+.|+.++.. +. + ..+.+. -.....|+++|.++.++++-.
T Consensus 347 ~y~~dd~~g~lyvaD~~n~~I~~~~~~-G~---v-~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~ 421 (433)
T 4hw6_A 347 AYAGEEDEYDFYFCDRDSHTVRVLTPE-GR---V-TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDC 421 (433)
T ss_dssp GGTTSSCCEEEEEEETTTTEEEEECTT-SE---E-EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred cccccCCCCcEEEEECCCCEEEEECCC-CC---E-EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeC
Confidence 7777777777778899999852 22 2 222111 134789999954777788777
Q ss_pred CCCcEEEEec
Q psy2107 381 FDNSVKLWDL 390 (391)
Q Consensus 381 ~dg~v~iwdl 390 (391)
..+.|+.+++
T Consensus 422 ~n~rIr~i~~ 431 (433)
T 4hw6_A 422 DNHRVRKIAP 431 (433)
T ss_dssp GGTEEEEEEE
T ss_pred CCCEEEEEec
Confidence 7888988875
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.05 E-value=0.006 Score=54.26 Aligned_cols=232 Identities=11% Similarity=0.124 Sum_probs=134.3
Q ss_pred EEEEEecC---CEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC-CC----cEEEEeecCC
Q psy2107 119 VSAIDFHN---DWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST-DQ----TAMIWEWKVE 190 (391)
Q Consensus 119 V~~~~~~~---~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~-dg----~v~iwd~~~~ 190 (391)
...|++++ ..|+.+...+.|+.+|+++..+..+.........++| +++++.|+.+.. ++ .+...+ ..
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~---d~~G~~lyvad~~~~~~~~~v~~~~--~~ 213 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICW---THEADSMIITNDQNNNDRPNNYILT--RE 213 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEE---CTTSSEEEEEECCSCTTSEEEEEEE--GG
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEE---eCCCCEEEEEeCCCCcccceEEEEe--CC
Confidence 34566663 3555555558899999987766666555667889999 778885554443 22 233333 11
Q ss_pred CCceeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107 191 SNSIECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI 269 (391)
Q Consensus 191 ~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (391)
. .......+.. ......++++| ++.++++-..++.|..++...+.. ..+.
T Consensus 214 g-~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~---------------------------~~~~ 264 (430)
T 3tc9_A 214 S-GFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET---------------------------TPLF 264 (430)
T ss_dssp G-TSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE---------------------------EEEE
T ss_pred C-ceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE---------------------------EEEE
Confidence 1 1211112221 33457788999 677666666778899999864221 0111
Q ss_pred eecCccCcccEEEeccCCe-EEEE-ECCCeEEEEeccc--Cce--eEEEECC----------------eeeE-EEEEC--
Q psy2107 270 TLKGHKEAISAVQWTAVDE-IITS-SWDHTLKIWDAEL--GGM--KSEIVGN----------------KSFF-DVHYS-- 324 (391)
Q Consensus 270 ~~~~~~~~v~~~~~~~~~~-l~s~-~~dg~i~iwd~~~--~~~--~~~~~~~----------------~~i~-~~~~~-- 324 (391)
... .......++|++++. |+.+ ...+.|..++... +.. ...+... .... .++..
T Consensus 265 ~~~-~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~ 343 (430)
T 3tc9_A 265 TIQ-DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNP 343 (430)
T ss_dssp ECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECG
T ss_pred EcC-CCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccc
Confidence 111 123456899997665 5555 4578899987653 221 1222211 0122 44443
Q ss_pred ------CCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc------------------cCcEEEEEECCCCCCEEEEee
Q psy2107 325 ------PLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH------------------KEWVQSVRWSPIDPQLFVSAS 380 (391)
Q Consensus 325 ------p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h------------------~~~v~~~~~~~~~~~~l~s~~ 380 (391)
++|.+.++=...+.|+.++.. +. +. .+.+. -.....++++|+++.++++-.
T Consensus 344 ~y~~~D~~g~lyvaD~~n~~I~~i~~~-G~---v~-~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~ 418 (430)
T 3tc9_A 344 AYKGSSDEYDFYFCDRENHCIRILTPQ-GR---VT-TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDR 418 (430)
T ss_dssp GGTTSSCCEEEEEEEGGGTEEEEECTT-SE---EE-EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred cccccCCCCeEEEEECCCcEEEEECCC-Cc---EE-EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEEC
Confidence 446666665667889999842 22 21 22111 125899999996677777777
Q ss_pred CCCcEEEEec
Q psy2107 381 FDNSVKLWDL 390 (391)
Q Consensus 381 ~dg~v~iwdl 390 (391)
....|+.+++
T Consensus 419 ~n~rIr~i~~ 428 (430)
T 3tc9_A 419 ENRRIRKIGY 428 (430)
T ss_dssp GGTEEEEEEE
T ss_pred CCCeEEEEcc
Confidence 7788888775
No 272
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.04 E-value=0.0028 Score=53.76 Aligned_cols=195 Identities=12% Similarity=0.139 Sum_probs=119.5
Q ss_pred CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCC-CCe---EEEEEe-C--CCcEEEEeecCCCCceeEEE
Q psy2107 126 NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDG-KDA---AFISVS-T--DQTAMIWEWKVESNSIECIH 198 (391)
Q Consensus 126 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~-~~~---~l~s~~-~--dg~v~iwd~~~~~~~~~~~~ 198 (391)
..++++....+-+.+||++++.+..+.. +.++.+..-|.-. .+. ++++.. . +++|++|+++........+.
T Consensus 40 ~s~ii~t~k~~gL~Vydl~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~ 117 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSLDGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMT 117 (355)
T ss_dssp GCEEEEEETTTEEEEEETTSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECS
T ss_pred ccEEEEEcCCCCEEEEcCCCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecc
Confidence 3467777788899999999999988764 6677777755210 111 233333 3 58999998753333322221
Q ss_pred E----EecCCCCeEEEEE--cCC-CC-EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee
Q psy2107 199 V----CRGHERGLETVTV--SES-RQ-QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT 270 (391)
Q Consensus 199 ~----~~~~~~~v~~l~~--~~~-~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (391)
. +......+..+++ +|. ++ ++++...+|.+..|++.....- ....+.+..
T Consensus 118 ~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g----------------------~~~~~lVR~ 175 (355)
T 3amr_A 118 DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNG----------------------YISGKKVRA 175 (355)
T ss_dssp CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTS----------------------CEEEEEEEE
T ss_pred ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCC----------------------cccceEEEE
Confidence 0 0011145666777 664 43 6788888999999998431100 011234555
Q ss_pred ecCccCcccEEEec-cCCeEEEEECCCeEEEEecc-----cCceeEEEECC---eeeEEEEE--CCCCC-EEEEee-CCC
Q psy2107 271 LKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAE-----LGGMKSEIVGN---KSFFDVHY--SPLSK-LVITAS-ADK 337 (391)
Q Consensus 271 ~~~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~-----~~~~~~~~~~~---~~i~~~~~--~p~~~-~l~~g~-~dg 337 (391)
+... +.+..+... ..+.|+.+-.+.-|..++.+ +++.+..+... ..+..|++ .++++ +|++++ .++
T Consensus 176 f~lg-sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~ 254 (355)
T 3amr_A 176 FKMN-SQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNS 254 (355)
T ss_dssp EECS-SCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGT
T ss_pred ecCC-CCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCC
Confidence 5543 456666666 46789999998777777754 23444444322 35667777 55666 666655 577
Q ss_pred cEEEEcCC
Q psy2107 338 QIRLYDPK 345 (391)
Q Consensus 338 ~i~iwd~~ 345 (391)
+..+||..
T Consensus 255 s~~Vydr~ 262 (355)
T 3amr_A 255 SYAIYDRQ 262 (355)
T ss_dssp EEEEEESS
T ss_pred EEEEEECC
Confidence 99999986
No 273
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.97 E-value=0.0014 Score=60.72 Aligned_cols=83 Identities=16% Similarity=0.181 Sum_probs=53.6
Q ss_pred CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCc-EEEEEECCCCC
Q psy2107 295 DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEW-VQSVRWSPIDP 373 (391)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~ 373 (391)
+|.|..||+.+++.+.......+...-.....+.+++.|+.|+.++.||.++++ .+..+...... -.-+.+..++.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~---~lW~~~~~~g~~a~P~~y~~~G~ 541 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGK---ELWKFQTGSGIVSPPITWEQDGE 541 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCC---EEEEEECSSCCCSCCEEEEETTE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCC---EEEEecCCCCcccCceEEEECCE
Confidence 688999999999998777655433322222246788889999999999998877 55555432221 12255555455
Q ss_pred CEEEEee
Q psy2107 374 QLFVSAS 380 (391)
Q Consensus 374 ~~l~s~~ 380 (391)
.++++.+
T Consensus 542 qYv~~~~ 548 (582)
T 1flg_A 542 QYLGVTV 548 (582)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 5555443
No 274
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.97 E-value=0.0063 Score=58.31 Aligned_cols=221 Identities=9% Similarity=-0.056 Sum_probs=127.3
Q ss_pred CCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEc
Q psy2107 134 YDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVS 213 (391)
Q Consensus 134 ~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~ 213 (391)
....|+..++.+.....+......+..|+|.+. .+.++++-...+.|+.+++............+.........|++.
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~--~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD 479 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 479 (791)
T ss_dssp CBSSEEEECTTSCCCEEEECSCSSEEEEEEETT--TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred cccceeEeeccCCcceeeecCCCceEEEeeccc--CCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeee
Confidence 345678888865544444445566788999432 456666766778888888542111011222333344567789999
Q ss_pred CCCCEE-EEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEEE
Q psy2107 214 ESRQQF-ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEIIT 291 (391)
Q Consensus 214 ~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s 291 (391)
+.++.| ++-...+.|.+.+++... ....+...-.....|++.+ .+.|+.
T Consensus 480 ~~~~~LY~tD~~~~~I~v~~ldG~~-----------------------------~~~l~~~~l~~P~gIaVDp~~g~LYw 530 (791)
T 3m0c_C 480 WIHSNIYWTDSVLGTVSVADTKGVK-----------------------------RKTLFRENGSKPRAIVVDPVHGFMYW 530 (791)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSS-----------------------------EEEEEECTTCCEEEEEEETTTTEEEE
T ss_pred ecCCcEEEEecCCCeEEEEeCCCCe-----------------------------EEEEEeCCCCCcceEEEecCCCCEEE
Confidence 876544 455567889999886411 1111222234467888885 467766
Q ss_pred EEC--CCeEEEEecccCceeEEEECC--eeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCcceEEEEeccccCcEEEE
Q psy2107 292 SSW--DHTLKIWDAELGGMKSEIVGN--KSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSV 366 (391)
Q Consensus 292 ~~~--dg~i~iwd~~~~~~~~~~~~~--~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~ 366 (391)
+.. .+.|...++.. .....+... .....|++++.+..|+.+ ...+.|..+++.......++ .-.+.-....+|
T Consensus 531 tD~g~~~~I~~~~~dG-~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~-~~~~~l~~P~gl 608 (791)
T 3m0c_C 531 TDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL-EDEKRLAHPFSL 608 (791)
T ss_dssp EECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-ECTTTTSSEEEE
T ss_pred ecCCCCCeEEEEecCC-CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEe-cCCCccCCCCEE
Confidence 653 26788888764 333333322 367889999876666555 44568999998654422222 111122345667
Q ss_pred EECCCCCCEEEEeeCCCcEEEEe
Q psy2107 367 RWSPIDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 367 ~~~~~~~~~l~s~~~dg~v~iwd 389 (391)
++. +++++++-...+.|...|
T Consensus 609 av~--~~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 609 AVF--EDKVFWTDIINEAIFSAN 629 (791)
T ss_dssp EEE--TTEEEEEETTTTEEEEEE
T ss_pred EEe--CCEEEEEECCCCEEEEEe
Confidence 764 345666666666666554
No 275
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.93 E-value=0.0083 Score=57.60 Aligned_cols=192 Identities=9% Similarity=0.038 Sum_probs=101.6
Q ss_pred cEEEEEec-C--CEEEEE-ECCC----eEEEEcCCCc-eEEeccCC-CCCeeEEEEEecCCCCeEEEEEeCCC-----cE
Q psy2107 118 WVSAIDFH-N--DWILTG-CYDH----SVHIWTRRGE-HKLNIPGH-GGPVKGVAWLYNDGKDAAFISVSTDQ-----TA 182 (391)
Q Consensus 118 ~V~~~~~~-~--~~l~t~-~~dg----~i~iwd~~~~-~~~~~~~~-~~~v~~l~~~~~~~~~~~l~s~~~dg-----~v 182 (391)
.+...+|+ + ++||-+ ..+| .|+++|+.+. ... ..+ ......++| +++++.|+....|. .|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l--~~~~~~~~~~~~W---spDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI--ADKVSGTNGEIVW---GPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC--CCCEEEECSCCEE---CSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC--CccccCceeeEEE---ecCCCEEEEEEECCCCCCCEE
Confidence 56777787 4 455544 3333 4999999554 311 111 112346889 67777666666542 45
Q ss_pred EEEeecCCCCceeEEEEEe-cCCCCeEEEEEcCCCCEEEEEeC---CCcEEEEECCCCCCCCCCCCCCCCCccccccccc
Q psy2107 183 MIWEWKVESNSIECIHVCR-GHERGLETVTVSESRQQFATGGW---DCLLKIWSADISKERGDPSENGDEGTTSKKRKKE 258 (391)
Q Consensus 183 ~iwd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~sg~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (391)
..+++ .+........+. ........+.|+|+|++|+..+. ...|.++|+.++..
T Consensus 250 ~~~~l--gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~-------------------- 307 (751)
T 2xe4_A 250 WRHVM--GKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNA-------------------- 307 (751)
T ss_dssp EEEET--TSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTT--------------------
T ss_pred EEEEC--CCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCC--------------------
Confidence 55554 333222122222 22345678899999998876653 34577888865311
Q ss_pred cccCCCCCc--eeeecCccCcccEEEeccCCeEEEEEC-C----CeEEEEecccC-ceeE-EEECCe--eeEEEEECCCC
Q psy2107 259 YSSASSRTP--LITLKGHKEAISAVQWTAVDEIITSSW-D----HTLKIWDAELG-GMKS-EIVGNK--SFFDVHYSPLS 327 (391)
Q Consensus 259 ~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~l~s~~~-d----g~i~iwd~~~~-~~~~-~~~~~~--~i~~~~~~p~~ 327 (391)
.. .............+.|+.++.|+..+. + ..|..+|+.++ .... .+.... .+..+.+. .+
T Consensus 308 -------~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~ 379 (751)
T 2xe4_A 308 -------HNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SN 379 (751)
T ss_dssp -------CCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SS
T ss_pred -------CceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CC
Confidence 11 111122334455566565666555443 3 25667777653 2222 233222 45556665 23
Q ss_pred CEEEEeeCCCc--EEEEcC
Q psy2107 328 KLVITASADKQ--IRLYDP 344 (391)
Q Consensus 328 ~~l~~g~~dg~--i~iwd~ 344 (391)
.++++...++. |+++++
T Consensus 380 ~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 380 YLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEEEEETTEEEEEEEEC
T ss_pred EEEEEEEeCCEEEEEEEec
Confidence 45566666775 555564
No 276
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.92 E-value=0.0057 Score=49.75 Aligned_cols=197 Identities=13% Similarity=0.125 Sum_probs=126.7
Q ss_pred CCCcEEEEEec--CC-EEEEEECCCeEEEEcCCCceEEecc-CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC
Q psy2107 115 HDDWVSAIDFH--ND-WILTGCYDHSVHIWTRRGEHKLNIP-GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE 190 (391)
Q Consensus 115 h~~~V~~~~~~--~~-~l~t~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 190 (391)
-.+.+..++++ ++ ++++...++.|...|.++..+..+. .-....-.|++ .+++.++++.-.++.+.++++...
T Consensus 25 ~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~---~~~g~~~vs~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 25 ITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEY---IGDNQFVISDERDYAIYVISLTPN 101 (255)
T ss_dssp CCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEE---CSTTEEEEEETTTTEEEEEEECTT
T ss_pred cccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEE---eCCCEEEEEECCCCcEEEEEcCCC
Confidence 33468999998 34 5566778899999999877766653 22256778888 667777777667788998887543
Q ss_pred CCceeEEEEEe------cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107 191 SNSIECIHVCR------GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS 264 (391)
Q Consensus 191 ~~~~~~~~~~~------~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (391)
.. ...+.... ........|+|+|.++.|+++.......+|.++. ....
T Consensus 102 ~~-i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g-~~~~------------------------ 155 (255)
T 3qqz_A 102 SE-VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNG-LLSS------------------------ 155 (255)
T ss_dssp CC-EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEES-TTCS------------------------
T ss_pred Ce-eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcc-cccC------------------------
Confidence 32 12222221 2345679999999998888777766667776641 1000
Q ss_pred CCceeee-------cCccCcccEEEecc-CCe-EEEEECCCeEEEEecccCceeEEEECC----------eeeEEEEECC
Q psy2107 265 RTPLITL-------KGHKEAISAVQWTA-VDE-IITSSWDHTLKIWDAELGGMKSEIVGN----------KSFFDVHYSP 325 (391)
Q Consensus 265 ~~~~~~~-------~~~~~~v~~~~~~~-~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~----------~~i~~~~~~p 325 (391)
..+..+ ..+-..+..++++| .+. ++.......+.++|.. ++.+..+... .....++|.+
T Consensus 156 -~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~ 233 (255)
T 3qqz_A 156 -NELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDA 233 (255)
T ss_dssp -SCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECT
T ss_pred -CceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECC
Confidence 000000 01223467899985 344 5555567788889965 6666666543 2567899999
Q ss_pred CCCEEEEeeCCCcEEEEc
Q psy2107 326 LSKLVITASADKQIRLYD 343 (391)
Q Consensus 326 ~~~~l~~g~~dg~i~iwd 343 (391)
+|++.++ ++-+.++.|.
T Consensus 234 ~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 234 SGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp TCCEEEE-ETTTEEEEEE
T ss_pred CCCEEEE-cCCceEEEEE
Confidence 9986555 6677777765
No 277
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.90 E-value=0.0038 Score=52.74 Aligned_cols=163 Identities=13% Similarity=0.071 Sum_probs=96.0
Q ss_pred eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC
Q psy2107 194 IECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG 273 (391)
Q Consensus 194 ~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (391)
.+.+..+.. ......++|+++++++++-..++.|..||.+... ...+.
T Consensus 22 ~~~~~~~p~-~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~------------------------------~~~~~- 69 (306)
T 2p4o_A 22 AKIITSFPV-NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ------------------------------QIHAT- 69 (306)
T ss_dssp EEEEEEECT-TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCE------------------------------EEEEE-
T ss_pred ceEeEeCCC-CCCcceEEECCCCCEEEEeCCCCeEEEECCCCce------------------------------EEEEe-
Confidence 344455543 2567899999999977776678899999875411 11111
Q ss_pred ccCcccEEEeccCCeEEEEEC--CC-eEEEEecccCceeEEEECC--eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107 274 HKEAISAVQWTAVDEIITSSW--DH-TLKIWDAELGGMKSEIVGN--KSFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348 (391)
Q Consensus 274 ~~~~v~~~~~~~~~~l~s~~~--dg-~i~iwd~~~~~~~~~~~~~--~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~ 348 (391)
.......+++.+++.++.+.. ++ .|..+|..+++........ .....++..+.+..+++-..++.|+++|.....
T Consensus 70 ~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 70 VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPS 149 (306)
T ss_dssp CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTE
T ss_pred CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCc
Confidence 123577889997777666653 22 4777787777754433321 123444555555555555468899999976432
Q ss_pred cceEEE-------EeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 349 GAIVKS-------TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 349 ~~~~~~-------~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
...... .....-...+.+ +|+++.++++-...+.|.++|+
T Consensus 150 ~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~ 196 (306)
T 2p4o_A 150 GSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPV 196 (306)
T ss_dssp EEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEB
T ss_pred EeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEe
Confidence 111100 000111235666 6756667777777888998886
No 278
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.88 E-value=0.0019 Score=59.85 Aligned_cols=84 Identities=13% Similarity=0.088 Sum_probs=52.0
Q ss_pred CCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccC-cEEEEEECCCC
Q psy2107 294 WDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKE-WVQSVRWSPID 372 (391)
Q Consensus 294 ~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~ 372 (391)
..|.|..||+.+++.+.......+...-.+...+.+++.++.|+.++.||.++++ .+..+.-... ...-+.+..++
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~---~lW~~~l~~g~~~~P~~y~~~G 527 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGD---LLWKFKIPSGAIGYPMTYTHKG 527 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCC---EEEEEECSSCCCSCCEEEEETT
T ss_pred CcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCC---EEEEeeCCCCcEeccEEEEeCC
Confidence 3588999999999988877644332221122246778889999999999999877 4444432221 11224444545
Q ss_pred CCEEEEee
Q psy2107 373 PQLFVSAS 380 (391)
Q Consensus 373 ~~~l~s~~ 380 (391)
..++++.+
T Consensus 528 ~qyv~~~~ 535 (599)
T 1w6s_A 528 TQYVAIYY 535 (599)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEc
Confidence 54555443
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.84 E-value=0.011 Score=50.26 Aligned_cols=216 Identities=7% Similarity=0.004 Sum_probs=124.3
Q ss_pred CCeEEEEcCCCce--EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEE
Q psy2107 135 DHSVHIWTRRGEH--KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTV 212 (391)
Q Consensus 135 dg~i~iwd~~~~~--~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 212 (391)
...|+..++++.. ............+++|.+. ++.++.+-...+.|..++++.... ...+ +.........+++
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~--~~~lyw~D~~~~~I~r~~~~g~~~-~~~~--~~~~l~~p~glav 86 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFS--HGLIYWSDVSEEAIKRTEFNKTES-VQNV--VVSGLLSPDGLAC 86 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGG--GTEEEEEETTTTEEEEEETTSSSC-CCEE--EEECCSCCCEEEE
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeC--CCEEEEEECCCCcEEEEEccCCCc-eEEE--EcCCCCCccEEEE
Confidence 4578888885432 1111112234668889543 456667767778888888542211 1111 1222345678999
Q ss_pred cCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEE
Q psy2107 213 SES-RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEII 290 (391)
Q Consensus 213 ~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~ 290 (391)
.+. ++++++-...+.|.+++++... ..............+++.+ .+.|+
T Consensus 87 d~~~g~ly~~d~~~~~I~~~~~dG~~-----------------------------~~~l~~~~~~~P~giavdp~~g~ly 137 (318)
T 3sov_A 87 DWLGEKLYWTDSETNRIEVSNLDGSL-----------------------------RKVLFWQELDQPRAIALDPSSGFMY 137 (318)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCS-----------------------------CEEEECSSCSSEEEEEEEGGGTEEE
T ss_pred EcCCCeEEEEECCCCEEEEEECCCCc-----------------------------EEEEEeCCCCCccEEEEeCCCCEEE
Confidence 874 4445555567889999886421 1111112234456788885 56666
Q ss_pred EEEC--CCeEEEEecccCceeEEEEC--CeeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCcceEEEEeccccCcEEE
Q psy2107 291 TSSW--DHTLKIWDAELGGMKSEIVG--NKSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQS 365 (391)
Q Consensus 291 s~~~--dg~i~iwd~~~~~~~~~~~~--~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~ 365 (391)
.+.. .+.|...++. |.....+.. -.....++++|++..|..+ +..+.|..+|+.......+ ..+.......
T Consensus 138 ~td~~~~~~I~r~~~d-G~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~---~~~~~~~P~g 213 (318)
T 3sov_A 138 WTDWGEVPKIERAGMD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV---VKGSLPHPFA 213 (318)
T ss_dssp EEECSSSCEEEEEETT-SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE---ECSCCSCEEE
T ss_pred EEecCCCCEEEEEEcC-CCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEE---ecCCCCCceE
Confidence 6653 5778888765 333333322 2356789999976655554 4567899999864332212 2223445677
Q ss_pred EEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 366 VRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 366 ~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
+++. .+.++.+-...+.|..+|.
T Consensus 214 lav~--~~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 214 LTLF--EDILYWTDWSTHSILACNK 236 (318)
T ss_dssp EEEE--TTEEEEEETTTTEEEEEET
T ss_pred EEEe--CCEEEEEecCCCeEEEEEC
Confidence 8775 3456666666677777664
No 280
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.82 E-value=0.0011 Score=59.02 Aligned_cols=152 Identities=13% Similarity=0.174 Sum_probs=93.5
Q ss_pred CeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec
Q psy2107 206 GLETVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT 284 (391)
Q Consensus 206 ~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 284 (391)
....|+++| ++..|+.+...+.|+.+|+.... +..+.........++++
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~------------------------------v~~~~~~~~~P~~ia~d 187 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEY------------------------------VSTVYSGLSKVRTICWT 187 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTE------------------------------EEEEECCCSCEEEEEEC
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCE------------------------------EEEEecCCCCcceEEEe
Confidence 457889998 45556666655788889886522 22222234556789999
Q ss_pred cCCe-EEEEECC-C----eEEEEecccCcee--EEEECCeeeEEEEECC-CCCEEEEeeCCCcEEEEcCCCCCcceEEEE
Q psy2107 285 AVDE-IITSSWD-H----TLKIWDAELGGMK--SEIVGNKSFFDVHYSP-LSKLVITASADKQIRLYDPKVKEGAIVKST 355 (391)
Q Consensus 285 ~~~~-l~s~~~d-g----~i~iwd~~~~~~~--~~~~~~~~i~~~~~~p-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 355 (391)
+++. |+.+... + .+..++ ..+... ..+........++++| ++.++++-..++.|+.++....... .+..
T Consensus 188 ~~G~~lyvad~~~~~~~~~v~~~~-~~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~-~~~~ 265 (430)
T 3tc9_A 188 HEADSMIITNDQNNNDRPNNYILT-RESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT-PLFT 265 (430)
T ss_dssp TTSSEEEEEECCSCTTSEEEEEEE-GGGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE-EEEE
T ss_pred CCCCEEEEEeCCCCcccceEEEEe-CCCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEEE
Confidence 6654 6666542 1 233344 333332 2333333456788999 6777766667789999998754311 1112
Q ss_pred eccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 356 FSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 356 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
.. .......++|+|++..++++-...+.|..++.
T Consensus 266 ~~-~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~ 299 (430)
T 3tc9_A 266 IQ-DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDY 299 (430)
T ss_dssp CS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred cC-CCCcceeEEEcCCCCEEEEEECCCCEEEEEeC
Confidence 21 22457899999955446777777788888763
No 281
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.80 E-value=0.012 Score=50.67 Aligned_cols=175 Identities=6% Similarity=-0.066 Sum_probs=104.2
Q ss_pred CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEE-eCCCcEEEEECCCCCCCCCCCCCCCCCcccccccc
Q psy2107 179 DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATG-GWDCLLKIWSADISKERGDPSENGDEGTTSKKRKK 257 (391)
Q Consensus 179 dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (391)
...|+..++. ..... .... ....+..++|++....|+.. ...+.|..++++....
T Consensus 52 ~~~I~~i~~~--g~~~~--~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~------------------- 107 (349)
T 3v64_C 52 RIDIRQVLPH--RSEYT--LLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV------------------- 107 (349)
T ss_dssp BSCEEEECTT--SCCEE--EEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-------------------
T ss_pred ccceEEEeCC--CCeeE--Eeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCc-------------------
Confidence 3456666643 32222 2222 34457899999765555544 4668888888865221
Q ss_pred ccccCCCCCceeeecCccCcccEEEecc-CCeEEEE-ECCCeEEEEecccCceeEEEECC-eeeEEEEECCCCCEEEEe-
Q psy2107 258 EYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITS-SWDHTLKIWDAELGGMKSEIVGN-KSFFDVHYSPLSKLVITA- 333 (391)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~~l~~g- 333 (391)
.............+++.+ ++.|+.+ ...+.|.+.++........+... .....+++.|.+..|...
T Consensus 108 ----------~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td 177 (349)
T 3v64_C 108 ----------EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTD 177 (349)
T ss_dssp ----------EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEE
T ss_pred ----------eEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEec
Confidence 111222223446788873 5565544 45678999998644333223222 356889999966655444
Q ss_pred eCC-CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 334 SAD-KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 334 ~~d-g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
... +.|..+++.... ........-...+.++++|+++.++++-+..+.|..+|+
T Consensus 178 ~~~~~~I~r~~~dG~~---~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~ 232 (349)
T 3v64_C 178 WGNTPRIEASSMDGSG---RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL 232 (349)
T ss_dssp CSSSCEEEEEETTSCS---CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cCCCCEEEEEeCCCCC---cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 344 788888876433 111222234467999999877777777777778888775
No 282
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.80 E-value=0.0094 Score=48.46 Aligned_cols=208 Identities=10% Similarity=0.123 Sum_probs=121.0
Q ss_pred eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe-cCCCCeEEEEEcCCCCEEEEEeCCCcE
Q psy2107 150 NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR-GHERGLETVTVSESRQQFATGGWDCLL 228 (391)
Q Consensus 150 ~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~sg~~dg~i 228 (391)
.+.+-...+..++|.|. .+.++++...++.|...|. . ...+..+. +-......|++.+++.++++.-.++.+
T Consensus 21 ~l~g~~~~lSGla~~~~--~~~L~aV~d~~~~I~~ld~--~---g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l 93 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQ--SNTLFSTINKPAAIVEMTT--N---GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAI 93 (255)
T ss_dssp ECTTCCSCEEEEEEETT--TTEEEEEEETTEEEEEEET--T---CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEE
T ss_pred ECCCcccCcceeEEeCC--CCEEEEEECCCCeEEEEeC--C---CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcE
Confidence 45566678999999543 3456666777888777773 2 23344432 223568899999988776665567889
Q ss_pred EEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecc---
Q psy2107 229 KIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAE--- 304 (391)
Q Consensus 229 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~--- 304 (391)
.++++........ ... . ...+. ..........++|++.+ .|+++.......+|.+.
T Consensus 94 ~~~~v~~~~~i~~--------------~~~----~-~~~~~-~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~ 153 (255)
T 3qqz_A 94 YVISLTPNSEVKI--------------LKK----I-KIPLQ-ESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLL 153 (255)
T ss_dssp EEEEECTTCCEEE--------------EEE----E-ECCCS-SCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTT
T ss_pred EEEEcCCCCeeee--------------eee----e-ccccc-cccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccc
Confidence 9998864221000 000 0 00000 01234457899999654 67777766555666554
Q ss_pred cCceeEEEEC--------CeeeEEEEECCC-CCEEEEeeCCCcEEEEcCCCCCcceEEEEec-cc------cCcEEEEEE
Q psy2107 305 LGGMKSEIVG--------NKSFFDVHYSPL-SKLVITASADKQIRLYDPKVKEGAIVKSTFS-SH------KEWVQSVRW 368 (391)
Q Consensus 305 ~~~~~~~~~~--------~~~i~~~~~~p~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~-~h------~~~v~~~~~ 368 (391)
....+..... -..+..+++.|. +++++.......+..+|.... ..-...+. +. -...-.|+|
T Consensus 154 ~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~--~~~~~~L~~g~~~l~~~~~qpEGia~ 231 (255)
T 3qqz_A 154 SSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE--VIGEMSLTKGSRGLSHNIKQAEGVAM 231 (255)
T ss_dssp CSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECSTTGGGCSSCCCSEEEEEE
T ss_pred cCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC--EEEEEEcCCccCCcccccCCCCeeEE
Confidence 1112222211 125678999997 456666667788999997532 22222333 21 125789999
Q ss_pred CCCCCCEEEEeeCCCcEEEE
Q psy2107 369 SPIDPQLFVSASFDNSVKLW 388 (391)
Q Consensus 369 ~~~~~~~l~s~~~dg~v~iw 388 (391)
.+ +++++++ +.-+.++++
T Consensus 232 d~-~G~lyIv-sE~n~~y~f 249 (255)
T 3qqz_A 232 DA-SGNIYIV-SEPNRFYRF 249 (255)
T ss_dssp CT-TCCEEEE-ETTTEEEEE
T ss_pred CC-CCCEEEE-cCCceEEEE
Confidence 99 5565555 665655554
No 283
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.80 E-value=0.038 Score=55.41 Aligned_cols=76 Identities=13% Similarity=0.126 Sum_probs=50.0
Q ss_pred CCcEEEEEec--------CCEEEEEEC-CCeEEEEcCCCceEEecc--CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEE
Q psy2107 116 DDWVSAIDFH--------NDWILTGCY-DHSVHIWTRRGEHKLNIP--GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMI 184 (391)
Q Consensus 116 ~~~V~~~~~~--------~~~l~t~~~-dg~i~iwd~~~~~~~~~~--~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~i 184 (391)
...|.|+++. .++++.|.. |++++|+++......... +......++..... ....+|..|-.||.+.-
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~-~~~~~L~igl~dG~l~~ 631 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTF-ESSHYLLCALGDGALFY 631 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEE-TTEEEEEEEETTSEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEe-CCCcEEEEEeCCCeEEE
Confidence 4479999985 369999997 999999999543322211 11234455555432 23468899999999888
Q ss_pred EeecCCCC
Q psy2107 185 WEWKVESN 192 (391)
Q Consensus 185 wd~~~~~~ 192 (391)
+.++..++
T Consensus 632 ~~~d~~tg 639 (1158)
T 3ei3_A 632 FGLNIETG 639 (1158)
T ss_dssp EEECTTTC
T ss_pred EEEcCCCC
Confidence 77654333
No 284
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.80 E-value=0.0012 Score=63.42 Aligned_cols=192 Identities=11% Similarity=0.024 Sum_probs=101.6
Q ss_pred CeeEEEEEecC-CCCeEEEEEeC-CC----cEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC-----
Q psy2107 157 PVKGVAWLYND-GKDAAFISVST-DQ----TAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD----- 225 (391)
Q Consensus 157 ~v~~l~~~~~~-~~~~~l~s~~~-dg----~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d----- 225 (391)
.+...+| + |++++|+.+.. +| +|+++|+.... ... ...+. .....++|+|+++.|+....|
T Consensus 175 ~~~~~~~---S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~-~~l-~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~ 246 (751)
T 2xe4_A 175 DVMEVKP---APPEHDLVAFSVDMSGNEVYTIEFKRISDPS-QTI-ADKVS---GTNGEIVWGPDHTSLFYVTKDETLRE 246 (751)
T ss_dssp EEEEEEE---CTTTTCEEEEEEESSSSSCEEEEEEETTCTT-CCC-CCCEE---EECSCCEECSSTTEEEEEEECTTCCE
T ss_pred EEeeeEe---cCCCCCEEEEEEeCCCCceEEEEEEECCCCC-EeC-Ccccc---CceeeEEEecCCCEEEEEEECCCCCC
Confidence 5677888 7 78887775433 33 48888865330 210 00111 113468899999888777665
Q ss_pred CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec-CccCcccEEEeccCCe-EEEEE---CCCeEEE
Q psy2107 226 CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK-GHKEAISAVQWTAVDE-IITSS---WDHTLKI 300 (391)
Q Consensus 226 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-l~s~~---~dg~i~i 300 (391)
..|..+++.++.. .....+. ........+.|++++. |+..+ ....|.+
T Consensus 247 ~~v~~~~lgt~~~---------------------------~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~ 299 (751)
T 2xe4_A 247 NKVWRHVMGKLQS---------------------------EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHL 299 (751)
T ss_dssp EEEEEEETTSCGG---------------------------GCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEE
T ss_pred CEEEEEECCCCch---------------------------hcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEE
Confidence 2577777755321 0111111 1223345778997764 44443 2446888
Q ss_pred EecccCc-ee--EEEEC--CeeeEEEEECCCCCEEEEeeCC----CcEEEEcCCCCCcceEEEE-eccccC--cEEEEEE
Q psy2107 301 WDAELGG-MK--SEIVG--NKSFFDVHYSPLSKLVITASAD----KQIRLYDPKVKEGAIVKST-FSSHKE--WVQSVRW 368 (391)
Q Consensus 301 wd~~~~~-~~--~~~~~--~~~i~~~~~~p~~~~l~~g~~d----g~i~iwd~~~~~~~~~~~~-~~~h~~--~v~~~~~ 368 (391)
+|+.++. .. ..+.. ......+.|+..+.+++....+ ..|..+++..... .. . +..|.. .+..+.+
T Consensus 300 ~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~--~~-~~li~~~~~~~l~~~~~ 376 (751)
T 2xe4_A 300 LDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSD--WS-HVLVDHSEDVFMESIAV 376 (751)
T ss_dssp EESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTC--CC-CEEECCCSSEEEEEEEE
T ss_pred EECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCccc--ce-eeEECCCCCcEEEEEEE
Confidence 8988752 12 22221 1234445544333344444333 3567777654211 11 1 122333 3455665
Q ss_pred CCCCCCEEEEeeCCCcEEEE
Q psy2107 369 SPIDPQLFVSASFDNSVKLW 388 (391)
Q Consensus 369 ~~~~~~~l~s~~~dg~v~iw 388 (391)
. ++.++++...+|..+||
T Consensus 377 ~--~~~lv~~~~~~g~~~l~ 394 (751)
T 2xe4_A 377 R--SNYLVVAGRRAGLTRIW 394 (751)
T ss_dssp C--SSEEEEEEEETTEEEEE
T ss_pred E--CCEEEEEEEeCCEEEEE
Confidence 4 55678888888875554
No 285
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.77 E-value=0.0075 Score=52.79 Aligned_cols=175 Identities=6% Similarity=-0.048 Sum_probs=104.5
Q ss_pred CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccc
Q psy2107 179 DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFA-TGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKK 257 (391)
Q Consensus 179 dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (391)
...|+..++. ...... .. ........++|++.+..|+ +-...+.|..++++...
T Consensus 95 ~~~I~~i~~~--~~~~~~--~~-~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~-------------------- 149 (386)
T 3v65_B 95 RIDIRQVLPH--RSEYTL--LL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN-------------------- 149 (386)
T ss_dssp BSCEEEECTT--SCCCEE--EE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC--------------------
T ss_pred CccceeeccC--CCcEEE--Ee-cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC--------------------
Confidence 4567777743 322222 22 2345688999997655554 44566889889886522
Q ss_pred ccccCCCCCceeeecCccCcccEEEecc-CCeEEEE-ECCCeEEEEecccCceeEEEECC-eeeEEEEECCCCCEEEEee
Q psy2107 258 EYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITS-SWDHTLKIWDAELGGMKSEIVGN-KSFFDVHYSPLSKLVITAS 334 (391)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~~l~~g~ 334 (391)
....+.........+++.+ .+.|+.+ ...+.|.+.++........+... .....+++.|.+..|....
T Consensus 150 ---------~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td 220 (386)
T 3v65_B 150 ---------VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTD 220 (386)
T ss_dssp ---------EEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred ---------cEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEec
Confidence 1111111222345677773 4555544 45678888887644333333222 3578899998766555443
Q ss_pred -CC-CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 335 -AD-KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 335 -~d-g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
.. +.|..+++.... ........-...+.|+|+|++++++++-+..+.|..+|+
T Consensus 221 ~~~~~~I~r~~~dG~~---~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~ 275 (386)
T 3v65_B 221 WGNTPRIEASSMDGSG---RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL 275 (386)
T ss_dssp CSSSCEEEEEETTSCS---CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECT
T ss_pred cCCCCEEEEEeCCCCC---cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 34 678888876433 222222334467999999867777777777788888775
No 286
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.74 E-value=0.00066 Score=64.18 Aligned_cols=191 Identities=8% Similarity=0.007 Sum_probs=99.1
Q ss_pred EEEEEecCCCCeEEEEEeCCC-----------cEEEEeecCCCCceeEEEEEec-CCCCeEEEEEcCCCCEEEEEeC-CC
Q psy2107 160 GVAWLYNDGKDAAFISVSTDQ-----------TAMIWEWKVESNSIECIHVCRG-HERGLETVTVSESRQQFATGGW-DC 226 (391)
Q Consensus 160 ~l~~~~~~~~~~~l~s~~~dg-----------~v~iwd~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~sg~~-dg 226 (391)
++++.|. ++.+++.|+.+. .+.+||.. .+.+..+..+.. +.....++++..++++++.|+. ++
T Consensus 190 ~~av~~~--~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~--t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~ 265 (656)
T 1k3i_A 190 AAAIEPT--SGRVLMWSSYRNDAFGGSPGGITLTSSWDPS--TGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAK 265 (656)
T ss_dssp EEEEETT--TTEEEEEEECCCTTTCSCCCSEEEEEEECTT--TCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTT
T ss_pred eEEEEec--CCEEEEEecccccccccCCCCeEEEEEEeCC--CCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCC
Confidence 4555331 678888887543 46777744 555555444433 2333446778889999999984 45
Q ss_pred cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec-cCCeEEEEE-CC-----CeEE
Q psy2107 227 LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-AVDEIITSS-WD-----HTLK 299 (391)
Q Consensus 227 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~-~d-----g~i~ 299 (391)
.+.+||..+.+-. .+..+...... .+++.. ++..++.|+ .+ ..+.
T Consensus 266 ~v~~yd~~t~~W~---------------------------~~~~~~~~R~~-~s~~~~~dg~iyv~GG~~~~~~~~~~~e 317 (656)
T 1k3i_A 266 KTSLYDSSSDSWI---------------------------PGPDMQVARGY-QSSATMSDGRVFTIGGSWSGGVFEKNGE 317 (656)
T ss_dssp CEEEEEGGGTEEE---------------------------ECCCCSSCCSS-CEEEECTTSCEEEECCCCCSSSCCCCEE
T ss_pred ceEEecCcCCcee---------------------------ECCCCCccccc-cceEEecCCeEEEEeCcccCCcccccce
Confidence 7999998763311 11111111111 233444 445566666 34 5689
Q ss_pred EEecccCceeEEEE-----CCeeeEEEEECCCCCEEEEeeCC---------CcEEEEcCCCCCcceEEEEecc------c
Q psy2107 300 IWDAELGGMKSEIV-----GNKSFFDVHYSPLSKLVITASAD---------KQIRLYDPKVKEGAIVKSTFSS------H 359 (391)
Q Consensus 300 iwd~~~~~~~~~~~-----~~~~i~~~~~~p~~~~l~~g~~d---------g~i~iwd~~~~~~~~~~~~~~~------h 359 (391)
+||..+.+-...-. ....-....+..++..++.|+.+ ..+..||............... .
T Consensus 318 ~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~ 397 (656)
T 1k3i_A 318 VYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPD 397 (656)
T ss_dssp EEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCC
T ss_pred EeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCC
Confidence 99998765332200 00000001223445555555444 3567888776542221111111 0
Q ss_pred cCcEEEEEECCCCCCEEEEeeCC
Q psy2107 360 KEWVQSVRWSPIDPQLFVSASFD 382 (391)
Q Consensus 360 ~~~v~~~~~~~~~~~~l~s~~~d 382 (391)
...-.++.|...++.+++.||.+
T Consensus 398 ~~~~~av~~~~~~~~i~v~GG~~ 420 (656)
T 1k3i_A 398 AMCGNAVMYDAVKGKILTFGGSP 420 (656)
T ss_dssp CBTCEEEEEETTTTEEEEECCBS
T ss_pred CCCCceEeccCCCCeEEEEeCCC
Confidence 11234455544467788888854
No 287
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.73 E-value=0.016 Score=49.34 Aligned_cols=228 Identities=9% Similarity=0.020 Sum_probs=115.3
Q ss_pred CcEEEEEec-C-CEEEEEECCCeEEEEcCCCc---eEEecc--CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC
Q psy2107 117 DWVSAIDFH-N-DWILTGCYDHSVHIWTRRGE---HKLNIP--GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV 189 (391)
Q Consensus 117 ~~V~~~~~~-~-~~l~t~~~dg~i~iwd~~~~---~~~~~~--~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 189 (391)
..+.+|.|. + ..++ ++..|.|... .++. ...... .....+.+|.| ++ +..++ ++.+|.|..-. .
T Consensus 36 ~~~~~v~~~~~~~~~~-~G~~g~i~~s-~DgG~tW~~~~~~~~~~~~~~~~i~~---~~-~~~~~-~g~~g~i~~S~--D 106 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWL-VGVNATLMET-RDGGQTWEPRTLVLDHSDYRFNSVSF---QG-NEGWI-VGEPPIMLHTT--D 106 (327)
T ss_dssp SCEEEEEESSSSCEEE-EETTTEEEEE-SSTTSSCEECCCCCSCCCCEEEEEEE---ET-TEEEE-EEETTEEEEES--S
T ss_pred CcEEEEEECCCCcEEE-EcCCCeEEEe-CCCCCCCeECCCCCCCCCccEEEEEe---cC-CeEEE-EECCCeEEEEC--C
Confidence 368899996 3 3555 5667766433 3322 111111 23456888988 33 34444 45566554422 2
Q ss_pred CCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107 190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI 269 (391)
Q Consensus 190 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (391)
....+..+.....+...+..+.+.+++..++.+ .+|.|.. ..+.++. ...
T Consensus 107 gG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~t--------------------------W~~-- 156 (327)
T 2xbg_A 107 GGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKN--------------------------WQA-- 156 (327)
T ss_dssp TTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSS--------------------------EEE--
T ss_pred CCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCC--------------------------CEE--
Confidence 233444432211233457778877766655554 4554432 1111111 111
Q ss_pred eecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEE--ECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC
Q psy2107 270 TLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEI--VGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK 347 (391)
Q Consensus 270 ~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~ 347 (391)
........+..+.+.+++.++..+.+|.+..-+-..+..-..+ .....+..+++.+++..++++ .+|.+++.+...+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~-~~G~~~~s~~D~G 235 (327)
T 2xbg_A 157 LVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIV-NGGKIAFSDPDNS 235 (327)
T ss_dssp EECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEE-TTTEEEEEETTEE
T ss_pred eecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEe-CCceEEEecCCCC
Confidence 1123345677888887777776666666554321112222222 223467888899988766554 5787777632111
Q ss_pred CcceEEEEe-ccccCcEEEEEECCCCCCEEEEeeCCCcEE
Q psy2107 348 EGAIVKSTF-SSHKEWVQSVRWSPIDPQLFVSASFDNSVK 386 (391)
Q Consensus 348 ~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~ 386 (391)
........- ..+...+.++++.+ ++.+++.+ .+|.|.
T Consensus 236 ~tW~~~~~~~~~~~~~~~~v~~~~-~~~~~~~g-~~g~i~ 273 (327)
T 2xbg_A 236 ENWGELLSPLRRNSVGFLDLAYRT-PNEVWLAG-GAGALL 273 (327)
T ss_dssp EEECCCBCTTSSCCSCEEEEEESS-SSCEEEEE-STTCEE
T ss_pred CeeEeccCCcccCCcceEEEEecC-CCEEEEEe-CCCeEE
Confidence 100000000 01223588999988 55555544 466663
No 288
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.61 E-value=0.025 Score=47.93 Aligned_cols=179 Identities=9% Similarity=0.022 Sum_probs=105.4
Q ss_pred CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccc
Q psy2107 179 DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFA-TGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKK 257 (391)
Q Consensus 179 dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (391)
...|+..|+. ...... .+. .......++|++.+..|+ +-...+.|..++++.....
T Consensus 9 ~~~I~~i~~~--~~~~~~--~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~------------------ 65 (316)
T 1ijq_A 9 RHEVRKMTLD--RSEYTS--LIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------------------ 65 (316)
T ss_dssp BSSEEEEETT--SCCCEE--EEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC------------------------
T ss_pred CCeEEEEECC--CcceEe--hhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCC------------------
Confidence 3568888854 322222 222 345678999998665554 4455688999988641100
Q ss_pred ccccCCCCCceeeecCccCcccEEEec-cCCeEEEE-ECCCeEEEEecccCceeEEEE-CCeeeEEEEECCCCCEEEEee
Q psy2107 258 EYSSASSRTPLITLKGHKEAISAVQWT-AVDEIITS-SWDHTLKIWDAELGGMKSEIV-GNKSFFDVHYSPLSKLVITAS 334 (391)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~-~~~~i~~~~~~p~~~~l~~g~ 334 (391)
......+...-.....+++. .++.|+.+ ...+.|.++|+........+. .-.....+++.|.+..|..+.
T Consensus 66 -------~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d 138 (316)
T 1ijq_A 66 -------SSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTD 138 (316)
T ss_dssp ---------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEE
T ss_pred -------cccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEc
Confidence 00111122222345778887 35665554 567899999987544333333 224668899999766555444
Q ss_pred C-C-CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 335 A-D-KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 335 ~-d-g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
. . +.|..+++.... ........-...+.++++|+++.++++-+..+.|..+|+
T Consensus 139 ~~~~~~I~~~~~dG~~---~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~ 193 (316)
T 1ijq_A 139 WGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 193 (316)
T ss_dssp CSSSCEEEEEETTSCC---EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cCCCCeEEEEcCCCCC---eEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEec
Confidence 3 3 688888875432 111122234568999999877777777777778888875
No 289
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.53 E-value=0.032 Score=47.24 Aligned_cols=178 Identities=8% Similarity=-0.038 Sum_probs=104.7
Q ss_pred CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccc
Q psy2107 179 DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQF-ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKK 257 (391)
Q Consensus 179 dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (391)
...|+..+++........+ +.+ ......++|++.+..| ++-...+.|..++++....
T Consensus 12 ~~~I~~i~l~~~~~~~~~~--~~~-~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~------------------- 69 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIV--VGG-LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES------------------- 69 (318)
T ss_dssp EEEEEEEETTCTTSCCEEE--EEE-EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSC-------------------
T ss_pred cCeEEEEECCCCceEEEEE--ecC-CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCc-------------------
Confidence 4678888865322112211 111 2346789999854444 5555678898888865321
Q ss_pred ccccCCCCCceeeecCccCcccEEEec-cCCeEEEE-ECCCeEEEEecccCceeEEE-ECCeeeEEEEECCCCCEEEEee
Q psy2107 258 EYSSASSRTPLITLKGHKEAISAVQWT-AVDEIITS-SWDHTLKIWDAELGGMKSEI-VGNKSFFDVHYSPLSKLVITAS 334 (391)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~-~~dg~i~iwd~~~~~~~~~~-~~~~~i~~~~~~p~~~~l~~g~ 334 (391)
....+...-.....+++. .++.|+.+ ...+.|.++++......... ..-.....+++.|.+..|..+.
T Consensus 70 ---------~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td 140 (318)
T 3sov_A 70 ---------VQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTD 140 (318)
T ss_dssp ---------CCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEE
T ss_pred ---------eEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEe
Confidence 011111122345677877 35555544 45678999998643322222 2223568899998766655554
Q ss_pred --CCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 335 --ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 335 --~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
..+.|..+++.... ........-...+.|+++|+++.++++-+..+.|..+|+
T Consensus 141 ~~~~~~I~r~~~dG~~---~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~ 195 (318)
T 3sov_A 141 WGEVPKIERAGMDGSS---RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL 195 (318)
T ss_dssp CSSSCEEEEEETTSCS---CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cCCCCEEEEEEcCCCC---eEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcC
Confidence 35788888875432 111222233467999999977777777777788888875
No 290
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.52 E-value=0.039 Score=49.05 Aligned_cols=193 Identities=9% Similarity=0.082 Sum_probs=107.4
Q ss_pred CeeEEEEEecCCC---CeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC----c-E
Q psy2107 157 PVKGVAWLYNDGK---DAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC----L-L 228 (391)
Q Consensus 157 ~v~~l~~~~~~~~---~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg----~-i 228 (391)
....++| +++ +.++++ ...+.|+.++.. ... +..+.........++++++++ |+.+...+ . +
T Consensus 140 ~P~gvav---d~~s~~g~Lyv~-D~~~~I~~id~~--~g~---v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv 209 (433)
T 4hw6_A 140 NIWRMMF---DPNSNYDDLYWV-GQRDAFRHVDFV--NQY---VDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGI 209 (433)
T ss_dssp CCCEEEE---CTTTTTCEEEEE-CBTSCEEEEETT--TTE---EEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEE
T ss_pred CCceEEE---ccccCCCEEEEE-eCCCCEEEEECC--CCE---EEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceE
Confidence 3567888 552 554444 333888888842 222 233333455688999999999 44444322 1 2
Q ss_pred EEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEEEEE-CCCeEEEEecccC
Q psy2107 229 KIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITSS-WDHTLKIWDAELG 306 (391)
Q Consensus 229 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~-~dg~i~iwd~~~~ 306 (391)
...+... . ......+. .-.....+++++ ++.|+.+. .++.|+.+|..++
T Consensus 210 ~~~~~~~-~---------------------------~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g 260 (433)
T 4hw6_A 210 YLFTRAS-G---------------------------FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATG 260 (433)
T ss_dssp EEECGGG-T---------------------------TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTC
T ss_pred EEEECCC-C---------------------------eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCC
Confidence 2222211 0 00001111 123345677886 67777665 5678999998877
Q ss_pred ceeEEE-ECC--eeeEEEEECCCCCEEE-EeeCCCcEEEEcCCCCCcc----eEEEEecc------------ccCcEEEE
Q psy2107 307 GMKSEI-VGN--KSFFDVHYSPLSKLVI-TASADKQIRLYDPKVKEGA----IVKSTFSS------------HKEWVQSV 366 (391)
Q Consensus 307 ~~~~~~-~~~--~~i~~~~~~p~~~~l~-~g~~dg~i~iwd~~~~~~~----~~~~~~~~------------h~~~v~~~ 366 (391)
.....+ ... .....++|+|++++|. +-...+.|+.++....... .......+ .-.....+
T Consensus 261 ~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~gi 340 (433)
T 4hw6_A 261 TLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQG 340 (433)
T ss_dssp CEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEE
T ss_pred eEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccE
Confidence 663332 221 1234699999999554 4455688999876532111 01111000 11346789
Q ss_pred EE---------CCCCCCEEEEeeCCCcEEEEe
Q psy2107 367 RW---------SPIDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 367 ~~---------~~~~~~~l~s~~~dg~v~iwd 389 (391)
++ .+ ++.++++-...+.|+.++
T Consensus 341 av~~n~~y~~dd~-~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 341 IFVKNEAYAGEED-EYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp EEEECGGGTTSSC-CEEEEEEETTTTEEEEEC
T ss_pred EEEccccccccCC-CCcEEEEECCCCEEEEEC
Confidence 99 55 566777766677888775
No 291
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.50 E-value=0.00067 Score=64.37 Aligned_cols=221 Identities=9% Similarity=-0.067 Sum_probs=116.6
Q ss_pred CCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC
Q psy2107 135 DHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE 214 (391)
Q Consensus 135 dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 214 (391)
.+.|+..++.+.....+......+..++|.+. .+.++++-...+.|+.+++............+.........|++.+
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~--~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~ 462 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 462 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETT--TTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccc--cCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe
Confidence 35778888866555544444456778899432 3445555556688888885421000011111111122345678875
Q ss_pred C-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEEEE
Q psy2107 215 S-RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITS 292 (391)
Q Consensus 215 ~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~ 292 (391)
. ++++++-...+.|.+++++.... ...+.........+++.+ .+.|+.+
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~~~-----------------------------~~l~~~~~~~P~giavDp~~g~ly~t 513 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGVKR-----------------------------KTLFREQGSKPRAIVVDPVHGFMYWT 513 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSCCE-----------------------------EEECCCSSCCCCCEECCSSSSCCEEC
T ss_pred eCCcEEEEeccCCeEEEEecCCCce-----------------------------EEEEeCCCCCcceEEEccCCCcEEEc
Confidence 4 44445545567888888754211 111111123346777775 4555554
Q ss_pred EC--CCeEEEEecccCceeEEEE-C-CeeeEEEEECCCCCEE-EEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEE
Q psy2107 293 SW--DHTLKIWDAELGGMKSEIV-G-NKSFFDVHYSPLSKLV-ITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVR 367 (391)
Q Consensus 293 ~~--dg~i~iwd~~~~~~~~~~~-~-~~~i~~~~~~p~~~~l-~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 367 (391)
.. .+.|..+++.. .....+. . -.....|+|+|++..| ++-+..+.|..+++...... .+............|+
T Consensus 514 d~~~~~~I~~~~~dG-~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~-~~~~~~~~~~~P~gla 591 (699)
T 1n7d_A 514 DWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK-TILEDEKRLAHPFSLA 591 (699)
T ss_dssp CCSSSCCEEBCCSSS-CCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCE-EECCCSSSCSSCCCCE
T ss_pred ccCCCCeEEEEeCCC-CCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceE-EEEecCCcCCCceEeE
Confidence 32 26777777653 2222221 1 1245679999875544 44456678999998643311 2111111223345566
Q ss_pred ECCCCCCEEEEeeCCCcEEEEec
Q psy2107 368 WSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 368 ~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
+.. ..++++....+.|..+|.
T Consensus 592 vd~--~~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 592 VFE--DKVFWTDIINEAIFSANR 612 (699)
T ss_dssp EET--TEEEEECSTTTCEEEEET
T ss_pred EEC--CEEEEEeCCCCeEEEEEc
Confidence 654 356777777788888763
No 292
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.50 E-value=0.012 Score=49.30 Aligned_cols=223 Identities=11% Similarity=0.177 Sum_probs=109.9
Q ss_pred cCCEEEEEE-CC-----CeEEEEcCCCceEEeccCC---CCCeeEEEEEecCCCCeEEEEEeCC-----CcEEEEeecCC
Q psy2107 125 HNDWILTGC-YD-----HSVHIWTRRGEHKLNIPGH---GGPVKGVAWLYNDGKDAAFISVSTD-----QTAMIWEWKVE 190 (391)
Q Consensus 125 ~~~~l~t~~-~d-----g~i~iwd~~~~~~~~~~~~---~~~v~~l~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~ 190 (391)
.+.+++.|+ .+ ..+.+||.....-..+... .....++.. ++.+++.|+.+ ..+.+||..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~~l~v~GG~~~~~~~~~~~~~d~~-- 86 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSL-----HDRIYVIGGYDGRSRLSSVECLDYT-- 86 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-----TTEEEEECCBCSSCBCCCEEEEETT--
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEE-----CCEEEEEcCCCCCccCceEEEEECC--
Confidence 345566666 32 3688889865544433321 111222222 56677777755 357777743
Q ss_pred CCc---eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107 191 SNS---IECIHVCRGHERGLETVTVSESRQQFATGGWD-----CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA 262 (391)
Q Consensus 191 ~~~---~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (391)
... +..+..+........++.+ ++++++.|+.+ ..+.+||+.+.+-
T Consensus 87 ~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W------------------------ 140 (301)
T 2vpj_A 87 ADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQW------------------------ 140 (301)
T ss_dssp CCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEE------------------------
T ss_pred CCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeE------------------------
Confidence 444 5555443322222223333 56677777654 3577788765321
Q ss_pred CCCCceeeecCccCcccEEEeccCCeEEEEECC-----CeEEEEecccCceeEEEECCe---eeEEEEECCCCCEEEEee
Q psy2107 263 SSRTPLITLKGHKEAISAVQWTAVDEIITSSWD-----HTLKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVITAS 334 (391)
Q Consensus 263 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~~g~ 334 (391)
..+..+...... .+++...+..++.|+.+ ..+.+||+.+.+-...-..+. ....+.+ ++++++.|+
T Consensus 141 ---~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG 214 (301)
T 2vpj_A 141 ---SMLGDMQTAREG-AGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGG 214 (301)
T ss_dssp ---EEEEECSSCCBS-CEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred ---EECCCCCCCccc-ceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeC
Confidence 111111111111 12222233445555543 468889987765433211111 1122222 467777776
Q ss_pred CC-----CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCC-----cEEEEec
Q psy2107 335 AD-----KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN-----SVKLWDL 390 (391)
Q Consensus 335 ~d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg-----~v~iwdl 390 (391)
.+ ..+.+||+.+..-. .+..+.........+.+ ++.+++.|+.++ .|.+||+
T Consensus 215 ~~~~~~~~~v~~yd~~~~~W~-~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~ 276 (301)
T 2vpj_A 215 FDGTAHLSSVEAYNIRTDSWT-TVTSMTTPRCYVGATVL---RGRLYAIAGYDGNSLLSSIECYDP 276 (301)
T ss_dssp BCSSSBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEEE---TTEEEEECCBCSSSBEEEEEEEET
T ss_pred CCCCcccceEEEEeCCCCcEE-ECCCCCCcccceeEEEE---CCEEEEEcCcCCCcccccEEEEcC
Confidence 54 46899998765422 11122212222233333 456788887663 4677775
No 293
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.49 E-value=0.015 Score=48.81 Aligned_cols=222 Identities=12% Similarity=0.091 Sum_probs=107.4
Q ss_pred CCEEEEEECC----CeEEEEcCCCceEEeccCCC---CCeeEEEEEecCCCCeEEEEEeCCC-----cEEEEeecCCCCc
Q psy2107 126 NDWILTGCYD----HSVHIWTRRGEHKLNIPGHG---GPVKGVAWLYNDGKDAAFISVSTDQ-----TAMIWEWKVESNS 193 (391)
Q Consensus 126 ~~~l~t~~~d----g~i~iwd~~~~~~~~~~~~~---~~v~~l~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~~~~ 193 (391)
+.+++.|+.+ ..+..||.....-..+.... ..-..+.+ ++.+++.|+.++ .+.+|| .....
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~~lyv~GG~~~~~~~~~~~~~d--~~~~~ 88 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM-----AGLVFAVGGFNGSLRVRTVDSYD--PVKDQ 88 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-----TTEEEEESCBCSSSBCCCEEEEE--TTTTE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE-----CCEEEEEeCcCCCccccceEEEC--CCCCc
Confidence 4455566543 35788888554433332111 11122222 566777777553 466777 44555
Q ss_pred eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCce
Q psy2107 194 IECIHVCRGHERGLETVTVSESRQQFATGGWDC-----LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPL 268 (391)
Q Consensus 194 ~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (391)
+..+..+........++.+ ++++++.|+.++ .+.+||+.+.+-. .+
T Consensus 89 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~---------------------------~~ 139 (302)
T 2xn4_A 89 WTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWF---------------------------HV 139 (302)
T ss_dssp EEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEE---------------------------EE
T ss_pred eeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEe---------------------------ec
Confidence 5555443322222223333 566777777653 4667777653211 00
Q ss_pred eeecCccCcccEEEeccCCeEEEEEC-------CCeEEEEecccCceeEEEECCe---eeEEEEECCCCCEEEEeeCC--
Q psy2107 269 ITLKGHKEAISAVQWTAVDEIITSSW-------DHTLKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVITASAD-- 336 (391)
Q Consensus 269 ~~~~~~~~~v~~~~~~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~~g~~d-- 336 (391)
..+...... .+++...+..++.|+. -..+.+||+.+.+-...-..+. ....+.+ ++++++.|+.+
T Consensus 140 ~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~ 216 (302)
T 2xn4_A 140 APMNTRRSS-VGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGP 216 (302)
T ss_dssp CCCSSCCBS-CEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSS
T ss_pred CCCCCcccC-ceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCC
Confidence 011111111 1222223334555543 2358889988765433211111 1122222 56777777654
Q ss_pred ---CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCC-----cEEEEec
Q psy2107 337 ---KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN-----SVKLWDL 390 (391)
Q Consensus 337 ---g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg-----~v~iwdl 390 (391)
..+.+||+.+..-. .+..+.........+.+ ++.+++.|+.++ .+.+||+
T Consensus 217 ~~~~~~~~yd~~~~~W~-~~~~~~~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 217 LVRKSVEVYDPTTNAWR-QVADMNMCRRNAGVCAV---NGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp SBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEET
T ss_pred cccceEEEEeCCCCCEe-eCCCCCCccccCeEEEE---CCEEEEECCcCCCcccccEEEEcC
Confidence 46889998765422 11122111111222333 556788887664 4788876
No 294
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.35 E-value=0.067 Score=46.95 Aligned_cols=198 Identities=11% Similarity=0.000 Sum_probs=115.4
Q ss_pred CCCcEEEEEec--CC-EEEEEECCCeEEEEcCCCc-----eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107 115 HDDWVSAIDFH--ND-WILTGCYDHSVHIWTRRGE-----HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE 186 (391)
Q Consensus 115 h~~~V~~~~~~--~~-~l~t~~~dg~i~iwd~~~~-----~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd 186 (391)
....+.+++|+ .+ ++.+-...+.|+.+++++. ....+.........+++.+. .+.+.++-...+.|.+.+
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~--~~~lY~~d~~~~~I~~~~ 187 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI--HSNIYWTDSVLGTVSVAD 187 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETT--TTEEEEEETTTTEEEEEC
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEec--CCceEEEECCCCeEEEEe
Confidence 34567788987 34 4455556788998988652 22222223445677888321 566667767788888887
Q ss_pred ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107 187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW--DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS 264 (391)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (391)
++ ..... ..+.........|++.|.+..|+.... .+.|...+++...
T Consensus 188 ~~--g~~~~--~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~--------------------------- 236 (400)
T 3p5b_L 188 TK--GVKRK--TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--------------------------- 236 (400)
T ss_dssp TT--TCSEE--EEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS---------------------------
T ss_pred CC--CCceE--EEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc---------------------------
Confidence 43 22222 222333456789999996666655542 3678888775411
Q ss_pred CCceeeecCccCcccEEEec-cCCeEEEEE-CCCeEEEEecccCceeEEEECC---eeeEEEEECCCCCEEEEeeCCCcE
Q psy2107 265 RTPLITLKGHKEAISAVQWT-AVDEIITSS-WDHTLKIWDAELGGMKSEIVGN---KSFFDVHYSPLSKLVITASADKQI 339 (391)
Q Consensus 265 ~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~---~~i~~~~~~p~~~~l~~g~~dg~i 339 (391)
........-.....|+++ ..+.|+.+. ..+.|..+|+............ .....+++. .+.++++-...+.|
T Consensus 237 --~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V 313 (400)
T 3p5b_L 237 --IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAI 313 (400)
T ss_dssp --CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSE
T ss_pred --cEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeE
Confidence 111122222456789998 456666664 5678999998654333333321 234466663 34455566667889
Q ss_pred EEEcCCCCC
Q psy2107 340 RLYDPKVKE 348 (391)
Q Consensus 340 ~iwd~~~~~ 348 (391)
..+|..+++
T Consensus 314 ~~~~~~~G~ 322 (400)
T 3p5b_L 314 FSANRLTGS 322 (400)
T ss_dssp EEEESSSCC
T ss_pred EEEEcCCCC
Confidence 888865544
No 295
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.33 E-value=0.12 Score=49.50 Aligned_cols=198 Identities=11% Similarity=0.004 Sum_probs=113.0
Q ss_pred CCCcEEEEEec--CC-EEEEEECCCeEEEEcCCCc-----eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107 115 HDDWVSAIDFH--ND-WILTGCYDHSVHIWTRRGE-----HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE 186 (391)
Q Consensus 115 h~~~V~~~~~~--~~-~l~t~~~dg~i~iwd~~~~-----~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd 186 (391)
....+.+|+|+ .. ++++-...+.|+.+++.+. ....+.........|++.+. .++++++-...+.|.+.+
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~--~~~LY~tD~~~~~I~v~~ 499 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI--HSNIYWTDSVLGTVSVAD 499 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT--TTEEEEEETTTTEEEEEE
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeec--CCcEEEEecCCCeEEEEe
Confidence 34567788886 33 5555566688988888652 22223323345667887322 346677777788898888
Q ss_pred ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107 187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW--DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS 264 (391)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (391)
++ ...... .+.........|++.|.+.+|+.... .+.|...+++...
T Consensus 500 ld--G~~~~~--l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~--------------------------- 548 (791)
T 3m0c_C 500 TK--GVKRKT--LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--------------------------- 548 (791)
T ss_dssp TT--SSSEEE--EEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC---------------------------
T ss_pred CC--CCeEEE--EEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc---------------------------
Confidence 54 322222 22233456889999997656655543 2678887775411
Q ss_pred CCceeeecCccCcccEEEec-cCCeEEEEE-CCCeEEEEecccCceeEEEECC---eeeEEEEECCCCCEEEEeeCCCcE
Q psy2107 265 RTPLITLKGHKEAISAVQWT-AVDEIITSS-WDHTLKIWDAELGGMKSEIVGN---KSFFDVHYSPLSKLVITASADKQI 339 (391)
Q Consensus 265 ~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~---~~i~~~~~~p~~~~l~~g~~dg~i 339 (391)
....+...-.....|+++ ..+.|+.+. ..+.|...++........+... .....|++.. +.++++-...+.|
T Consensus 549 --~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I 625 (791)
T 3m0c_C 549 --IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAI 625 (791)
T ss_dssp --EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEE
T ss_pred --eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEE
Confidence 111222223456788888 566766664 4568999988644443333321 1334566642 3444444556778
Q ss_pred EEEcCCCCC
Q psy2107 340 RLYDPKVKE 348 (391)
Q Consensus 340 ~iwd~~~~~ 348 (391)
...+..++.
T Consensus 626 ~~~dk~tG~ 634 (791)
T 3m0c_C 626 FSANRLTGS 634 (791)
T ss_dssp EEEETTTCC
T ss_pred EEEeCCCCc
Confidence 888765554
No 296
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.32 E-value=0.064 Score=45.94 Aligned_cols=176 Identities=10% Similarity=0.119 Sum_probs=95.1
Q ss_pred CCCcEEEEeecCCCCceeEEEEEec-----CCCCeEEEEEcC--CCC--EEEEEeC--CCcEEEEECCCCCCCCCCCCCC
Q psy2107 178 TDQTAMIWEWKVESNSIECIHVCRG-----HERGLETVTVSE--SRQ--QFATGGW--DCLLKIWSADISKERGDPSENG 246 (391)
Q Consensus 178 ~dg~v~iwd~~~~~~~~~~~~~~~~-----~~~~v~~l~~~~--~~~--~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~ 246 (391)
.+|.|.++|.+........+. +.+ .......+.+.+ ++. ++++-.. +..|.+|+++....
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~-~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~-------- 151 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELE-IIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEK-------- 151 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECE-EECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTT--------
T ss_pred CCCeEEEEecCCCCCceEEEE-ccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCC--------
Confidence 689999999653333333332 222 223566777655 343 3333322 46777877754211
Q ss_pred CCCccccccccccccCCCCCceeeecCc-cCcccEEEeccCCeEEEEEC------------------CCeEEEEecccCc
Q psy2107 247 DEGTTSKKRKKEYSSASSRTPLITLKGH-KEAISAVQWTAVDEIITSSW------------------DHTLKIWDAELGG 307 (391)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~l~s~~~------------------dg~i~iwd~~~~~ 307 (391)
....+..+.+. -...+.+...+++.++.++. .|.|.-+|. ++
T Consensus 152 -----------------~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~ 212 (355)
T 3sre_A 152 -----------------SLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND 212 (355)
T ss_dssp -----------------EEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC
T ss_pred -----------------EEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce
Confidence 01122233322 23456788887777666543 144555554 33
Q ss_pred eeEEEECCeeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCC
Q psy2107 308 MKSEIVGNKSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD 382 (391)
Q Consensus 308 ~~~~~~~~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 382 (391)
.......-...+.++|+|+++.|..+ +..+.|+.|++...........+ ...+..-.+++.++++++.+++..+
T Consensus 213 ~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 213 VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 32222222356789999999877665 45789999998642211122233 2345678888988325566655544
No 297
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.31 E-value=0.066 Score=45.90 Aligned_cols=179 Identities=9% Similarity=0.163 Sum_probs=103.7
Q ss_pred CCCeEEEEcCCC--ceEEec--cC-----CCCCeeEEEEEecCCCC--eEEEEEeC--CCcEEEEeecCCCCceeEEEEE
Q psy2107 134 YDHSVHIWTRRG--EHKLNI--PG-----HGGPVKGVAWLYNDGKD--AAFISVST--DQTAMIWEWKVESNSIECIHVC 200 (391)
Q Consensus 134 ~dg~i~iwd~~~--~~~~~~--~~-----~~~~v~~l~~~~~~~~~--~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~ 200 (391)
.+|.|.++|.+. .....+ .+ .......+.+.+. .++ .++++-.. +.+|.+|+++........+..+
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d-~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFID-DDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEEC-TTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEEC-CCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc
Confidence 689999999852 222222 22 2235677777663 233 24444333 5788999987665555556566
Q ss_pred ecC-CCCeEEEEEcCCCCEEEEEeC---C--------------CcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107 201 RGH-ERGLETVTVSESRQQFATGGW---D--------------CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA 262 (391)
Q Consensus 201 ~~~-~~~v~~l~~~~~~~~l~sg~~---d--------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (391)
.+. -...+.+.+.++|.+.++... | |.|.-+|.
T Consensus 160 ~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~----------------------------- 210 (355)
T 3sre_A 160 RHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP----------------------------- 210 (355)
T ss_dssp CCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-----------------------------
T ss_pred ccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-----------------------------
Confidence 543 235788999999987666431 1 22222222
Q ss_pred CCCCceeeecCccCcccEEEeccCC-eEEEE-ECCCeEEEEeccc-Cce--eEEEECCeeeEEEEECC-CCCEEEEeeCC
Q psy2107 263 SSRTPLITLKGHKEAISAVQWTAVD-EIITS-SWDHTLKIWDAEL-GGM--KSEIVGNKSFFDVHYSP-LSKLVITASAD 336 (391)
Q Consensus 263 ~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~-~~dg~i~iwd~~~-~~~--~~~~~~~~~i~~~~~~p-~~~~l~~g~~d 336 (391)
. ....+...-..-+.++|+|++ .++.+ +..+.|..|++.. +.. ...+......-.+++.+ +|++.+++..+
T Consensus 211 --~-~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 211 --N-DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp --T-CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESC
T ss_pred --C-eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCC
Confidence 1 111222222345789999776 45554 5678999999863 332 22344445677899999 59987766544
Q ss_pred -CcEEEEcCC
Q psy2107 337 -KQIRLYDPK 345 (391)
Q Consensus 337 -g~i~iwd~~ 345 (391)
+.|..|+..
T Consensus 288 g~~v~~~~P~ 297 (355)
T 3sre_A 288 GMRIFFYDAE 297 (355)
T ss_dssp HHHHHSCCTT
T ss_pred ceEEEEECCC
Confidence 345445544
No 298
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.30 E-value=0.06 Score=45.20 Aligned_cols=221 Identities=10% Similarity=0.091 Sum_probs=108.7
Q ss_pred EEEEEEC--CCeEEEEcCCCceEEeccC---CCCCeeEEEEEecCCCCeEEEEEeCC----CcEEEEeecCCCCceeEEE
Q psy2107 128 WILTGCY--DHSVHIWTRRGEHKLNIPG---HGGPVKGVAWLYNDGKDAAFISVSTD----QTAMIWEWKVESNSIECIH 198 (391)
Q Consensus 128 ~l~t~~~--dg~i~iwd~~~~~~~~~~~---~~~~v~~l~~~~~~~~~~~l~s~~~d----g~v~iwd~~~~~~~~~~~~ 198 (391)
+++.|+. ...+.+||.....-..+.. ......++.+ ++.+++.|+.+ ..+.+|| .....+..+.
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~~lyv~GG~~~~~~~~~~~~d--~~~~~W~~~~ 86 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW-----DNVVYILGGSQLFPIKRMDCYN--VVKDSWYSKL 86 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE-----TTEEEEECCBSSSBCCEEEEEE--TTTTEEEEEE
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE-----CCEEEEEeCCCCCCcceEEEEe--CCCCeEEECC
Confidence 4555554 3578889986544333321 1122222333 56677777755 5667777 4455565554
Q ss_pred EEecCCCCeEEEEEcCCCCEEEEEeCC------CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec
Q psy2107 199 VCRGHERGLETVTVSESRQQFATGGWD------CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK 272 (391)
Q Consensus 199 ~~~~~~~~v~~l~~~~~~~~l~sg~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (391)
.+.........+.+ ++++++.|+.+ ..+.+||..+.+-. .+..+.
T Consensus 87 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~---------------------------~~~~~p 137 (306)
T 3ii7_A 87 GPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWH---------------------------TKPSML 137 (306)
T ss_dssp CCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEE---------------------------EECCCS
T ss_pred CCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceE---------------------------eCCCCc
Confidence 44322222233333 56677777765 45778887653311 000011
Q ss_pred CccCcccEEEeccCCeEEEEEC---------CCeEEEEecccCceeEEEECCe--eeEEEEECCCCCEEEEeeCC-----
Q psy2107 273 GHKEAISAVQWTAVDEIITSSW---------DHTLKIWDAELGGMKSEIVGNK--SFFDVHYSPLSKLVITASAD----- 336 (391)
Q Consensus 273 ~~~~~v~~~~~~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~--~i~~~~~~p~~~~l~~g~~d----- 336 (391)
..... .+++...+..++.|+. -..+.+||+.+.+-...-.... .-.+++.. ++++++.|+.+
T Consensus 138 ~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~ 215 (306)
T 3ii7_A 138 TQRCS-HGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGL 215 (306)
T ss_dssp SCCBS-CEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEB
T ss_pred CCcce-eEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCC
Confidence 00111 1122223334455543 3458889988765332211111 11122222 56677777643
Q ss_pred CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCC-----CcEEEEec
Q psy2107 337 KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD-----NSVKLWDL 390 (391)
Q Consensus 337 g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----g~v~iwdl 390 (391)
..+.+||+.+..-. .+..+.........+.+ ++.+++.|+.+ ..+.+||+
T Consensus 216 ~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~~~~yd~ 270 (306)
T 3ii7_A 216 DNVEYYDIKLNEWK-MVSPMPWKGVTVKCAAV---GSIVYVLAGFQGVGRLGHILEYNT 270 (306)
T ss_dssp CCEEEEETTTTEEE-ECCCCSCCBSCCEEEEE---TTEEEEEECBCSSSBCCEEEEEET
T ss_pred ceEEEeeCCCCcEE-ECCCCCCCccceeEEEE---CCEEEEEeCcCCCeeeeeEEEEcC
Confidence 46889998765421 11122222222333444 45678888755 45777775
No 299
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.27 E-value=0.076 Score=45.70 Aligned_cols=240 Identities=11% Similarity=0.076 Sum_probs=115.1
Q ss_pred cEEEEEec--CCEEEEEECCCeEEEEcCCCceE--Eecc---CCCCCeeEEEEEecCCC---C-eEEEEEeCC-----Cc
Q psy2107 118 WVSAIDFH--NDWILTGCYDHSVHIWTRRGEHK--LNIP---GHGGPVKGVAWLYNDGK---D-AAFISVSTD-----QT 181 (391)
Q Consensus 118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~--~~~~---~~~~~v~~l~~~~~~~~---~-~~l~s~~~d-----g~ 181 (391)
.-..++|. |+ ++.+..+|.|++++ ++... ..+. ........|+| +++ + .+.++-... +.
T Consensus 32 ~P~~ia~~pdG~-l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~---~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 32 VPWALAFLPDGG-MLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLAL---HPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CEEEEEECTTSC-EEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEE---CTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CceEEEEcCCCe-EEEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEE---CCCCCCCCEEEEEEecCCCCCccE
Confidence 34578887 44 55556779999998 44321 1111 12356788999 555 3 444443332 56
Q ss_pred EEEEeecCCCCce---eEE-EEEe---cCCCCeEEEEEcCCCCEEEEEeCC-------------CcEEEEECCCCCCCCC
Q psy2107 182 AMIWEWKVESNSI---ECI-HVCR---GHERGLETVTVSESRQQFATGGWD-------------CLLKIWSADISKERGD 241 (391)
Q Consensus 182 v~iwd~~~~~~~~---~~~-~~~~---~~~~~v~~l~~~~~~~~l~sg~~d-------------g~i~iwd~~~~~~~~~ 241 (391)
|..++.. .... +.+ ..+. +.......++|.|+|.+.++-+.. |.|.-++.+..-...
T Consensus 107 v~r~~~~--~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~- 183 (352)
T 2ism_A 107 VVRLRHL--GERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPG- 183 (352)
T ss_dssp EEEEEEC--SSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTT-
T ss_pred EEEEEeC--CCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCC-
Confidence 7777654 2211 112 2233 111234689999999766664322 344444433200000
Q ss_pred CCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEEEEECCCeE-------EEEecccCc------
Q psy2107 242 PSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITSSWDHTL-------KIWDAELGG------ 307 (391)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~dg~i-------~iwd~~~~~------ 307 (391)
+ +.. ..........-.++. ....++|++ .+.|+++.....- .+.-+..+.
T Consensus 184 ----n-pf~----------~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~ 247 (352)
T 2ism_A 184 ----N-PFL----------GRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPR 247 (352)
T ss_dssp ----C-TTT----------TCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTT
T ss_pred ----C-ccc----------CCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCc
Confidence 0 000 000001111122332 245678886 6676666432221 122222221
Q ss_pred ------------eeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcc---eEEEEeccccCcEEEEEECCCC
Q psy2107 308 ------------MKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGA---IVKSTFSSHKEWVQSVRWSPID 372 (391)
Q Consensus 308 ------------~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~---~~~~~~~~h~~~v~~~~~~~~~ 372 (391)
+...+..+.....++| .+|.++++....+.|...++...... .....+..-...+..+++.|++
T Consensus 248 ~~g~~~~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG 326 (352)
T 2ism_A 248 VVGRGNDPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDG 326 (352)
T ss_dssp CCSCCCCTTSCCCSEECTTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTS
T ss_pred ccCCCCCCCCcCCeEecCCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCC
Confidence 2223322334566777 45776666666677887776543211 0011221223578999999955
Q ss_pred CCEEEEe-eCCC
Q psy2107 373 PQLFVSA-SFDN 383 (391)
Q Consensus 373 ~~~l~s~-~~dg 383 (391)
.++++. ..+|
T Consensus 327 -~lyv~~~~~~g 337 (352)
T 2ism_A 327 -ALYVTTSNRDG 337 (352)
T ss_dssp -CEEEEECSTTT
T ss_pred -cEEEEEeCCCC
Confidence 444444 3344
No 300
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.23 E-value=0.021 Score=48.09 Aligned_cols=227 Identities=10% Similarity=0.070 Sum_probs=109.2
Q ss_pred EEEecCCEEEEEECC----CeEEEEcCCCceEEeccCCC---CCeeEEEEEecCCCCeEEEEEeC----C-----CcEEE
Q psy2107 121 AIDFHNDWILTGCYD----HSVHIWTRRGEHKLNIPGHG---GPVKGVAWLYNDGKDAAFISVST----D-----QTAMI 184 (391)
Q Consensus 121 ~~~~~~~~l~t~~~d----g~i~iwd~~~~~~~~~~~~~---~~v~~l~~~~~~~~~~~l~s~~~----d-----g~v~i 184 (391)
++...+.+++.|+.+ ..+.+||.....-..+.... .....+.. ++.+++.|+. + ..+.+
T Consensus 20 ~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~~lyv~GG~~~~~~~~~~~~~~~~ 94 (308)
T 1zgk_A 20 APKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV-----GGLLYAVGGRNNSPDGNTDSSALDC 94 (308)
T ss_dssp -CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-----TTEEEEECCEEEETTEEEECCCEEE
T ss_pred ccCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE-----CCEEEEECCCcCCCCCCeecceEEE
Confidence 344456677777742 46888998655444332211 11122222 5667777765 2 35667
Q ss_pred EeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCCCCCCCCCCCCCCcccccccccc
Q psy2107 185 WEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD-----CLLKIWSADISKERGDPSENGDEGTTSKKRKKEY 259 (391)
Q Consensus 185 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (391)
||. .+..+..+..+........++.+ ++++++.|+.+ ..+.+||..+.+-..
T Consensus 95 ~d~--~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~------------------- 151 (308)
T 1zgk_A 95 YNP--MTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHL------------------- 151 (308)
T ss_dssp EET--TTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEE-------------------
T ss_pred ECC--CCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeE-------------------
Confidence 773 34455444333322222223333 56677777643 357778876533210
Q ss_pred ccCCCCCceeeecCccCcccEEEeccCCeEEEEECC-----CeEEEEecccCceeEEEECC--e-eeEEEEECCCCCEEE
Q psy2107 260 SSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWD-----HTLKIWDAELGGMKSEIVGN--K-SFFDVHYSPLSKLVI 331 (391)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~--~-~i~~~~~~p~~~~l~ 331 (391)
+..+......- +++...+..++.|+.+ ..+.+||+.+.+-...-..+ . ....+.+ ++++++
T Consensus 152 --------~~~~p~~r~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv 220 (308)
T 1zgk_A 152 --------VAPMLTRRIGV-GVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYA 220 (308)
T ss_dssp --------CCCCSSCCBSC-EEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEE
T ss_pred --------CCCCCccccce-EEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEE
Confidence 00011111111 1222233445555543 45888998766432221111 1 1122223 567777
Q ss_pred EeeCC-----CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCC-----cEEEEec
Q psy2107 332 TASAD-----KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN-----SVKLWDL 390 (391)
Q Consensus 332 ~g~~d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg-----~v~iwdl 390 (391)
.|+.+ ..+.+||+.+..-. .+..+.........+.+ ++.+++.|+.++ .+.+||+
T Consensus 221 ~GG~~~~~~~~~v~~yd~~~~~W~-~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~ 285 (308)
T 1zgk_A 221 AGGYDGQDQLNSVERYDVETETWT-FVAPMKHRRSALGITVH---QGRIYVLGGYDGHTFLDSVECYDP 285 (308)
T ss_dssp ECCBCSSSBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCEEEEEET
T ss_pred EeCCCCCCccceEEEEeCCCCcEE-ECCCCCCCccceEEEEE---CCEEEEEcCcCCCcccceEEEEcC
Confidence 77654 56899998765421 11112211122223333 456788887553 4667775
No 301
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.05 E-value=0.019 Score=51.55 Aligned_cols=153 Identities=10% Similarity=0.041 Sum_probs=88.6
Q ss_pred CeEEEEEcCC-C-CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec-C---ccCccc
Q psy2107 206 GLETVTVSES-R-QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK-G---HKEAIS 279 (391)
Q Consensus 206 ~v~~l~~~~~-~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~v~ 279 (391)
....|+|+|. . +++++-...+.|++.|+..+.. ..+. . ......
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v------------------------------~~l~~~~~~~~~~p~ 189 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRML------------------------------SSPLNINTIPTNRIR 189 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEE------------------------------EEEECCTTSSCSBEE
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEE------------------------------EEEEccCccccCCCc
Confidence 4578999983 4 4444444446788888865332 1211 1 123467
Q ss_pred EEEe-------ccCCe-EEEEECCC-------eEEEEeccc-Ccee-----EEEECCeeeEEEEECCC-CCEEEEeeCCC
Q psy2107 280 AVQW-------TAVDE-IITSSWDH-------TLKIWDAEL-GGMK-----SEIVGNKSFFDVHYSPL-SKLVITASADK 337 (391)
Q Consensus 280 ~~~~-------~~~~~-l~s~~~dg-------~i~iwd~~~-~~~~-----~~~~~~~~i~~~~~~p~-~~~l~~g~~dg 337 (391)
.++| ++++. |+++...+ .|.+++... +... ..+........++++|+ +.++++-..++
T Consensus 190 ~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g 269 (496)
T 3kya_A 190 SIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKG 269 (496)
T ss_dssp EEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTT
T ss_pred EEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCC
Confidence 8899 75554 77766543 256665333 2221 22222224457788995 55555666778
Q ss_pred cEEEEcCC-------CCCc-----------ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107 338 QIRLYDPK-------VKEG-----------AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 338 ~i~iwd~~-------~~~~-----------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 389 (391)
.|+.+|+. ++.. ...+... +.......|+|+|++..++++-.....|+.++
T Consensus 270 ~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid 338 (496)
T 3kya_A 270 QVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSD 338 (496)
T ss_dssp EEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEEEEecccccccccCceeecccccccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEe
Confidence 89999986 4332 0011122 23345789999995544566666677888755
No 302
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.05 E-value=0.21 Score=46.70 Aligned_cols=215 Identities=6% Similarity=-0.073 Sum_probs=127.0
Q ss_pred CCCeEEEEcCCCceEE-ecc-CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEE
Q psy2107 134 YDHSVHIWTRRGEHKL-NIP-GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVT 211 (391)
Q Consensus 134 ~dg~i~iwd~~~~~~~-~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~ 211 (391)
....|+..++.+.... .+. ..-.....|+|.+. ++.++++-..++.|..++++ ....+. .+.........++
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~--~~~lywtD~~~~~I~r~~~~--g~~~~~--v~~~g~~~P~GlA 86 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVT--DNRIYWTDISLKTISRAFMN--GSALEH--VVEFGLDYPEGMA 86 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETT--TTEEEEEETTTTEEEEEETT--SCSCEE--EECSSCSCCCEEE
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECC--CCEEEEEECCCCeEEEEECC--CCCcEE--EEeCCCCCcceEE
Confidence 4567888888543222 222 22346778999543 45666676778888888753 222222 2222234577899
Q ss_pred EcCCCCEE-EEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeE
Q psy2107 212 VSESRQQF-ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEI 289 (391)
Q Consensus 212 ~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l 289 (391)
+.+.+..| ++-...+.|.+.+++... ....+...-.....+++.| .+.|
T Consensus 87 vD~~~~~LY~tD~~~~~I~v~~~dG~~-----------------------------~~~l~~~~l~~P~~iavdp~~G~l 137 (628)
T 4a0p_A 87 VDWLGKNLYWADTGTNRIEVSKLDGQH-----------------------------RQVLVWKDLDSPRALALDPAEGFM 137 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSTT-----------------------------CEEEECSSCCCEEEEEEETTTTEE
T ss_pred EEeCCCEEEEEECCCCEEEEEecCCCc-----------------------------EEEEEeCCCCCcccEEEccCCCeE
Confidence 98765544 554556788888886421 1111112223457888885 6777
Q ss_pred EEEEC--CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCcceEEEEeccccCcEEEE
Q psy2107 290 ITSSW--DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSV 366 (391)
Q Consensus 290 ~s~~~--dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~ 366 (391)
+.+.. .+.|...++...........-.....++++++++.|..+ ...+.|..+|+..... ... ........++
T Consensus 138 Y~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~---~~~l~~P~gl 213 (628)
T 4a0p_A 138 YWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVI---ADDLPHPFGL 213 (628)
T ss_dssp EEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEE---EECCSCEEEE
T ss_pred EEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEe---eccCCCceEE
Confidence 76653 467777777544333333333467889999987666555 4567899999865432 222 2233345678
Q ss_pred EECCCCCCEEEEeeCCCcEEEEe
Q psy2107 367 RWSPIDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 367 ~~~~~~~~~l~s~~~dg~v~iwd 389 (391)
++.. +.+++|-...+.|...|
T Consensus 214 av~~--~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 214 TQYQ--DYIYWTDWSRRSIERAN 234 (628)
T ss_dssp EEET--TEEEEEETTTTEEEEEE
T ss_pred EEEC--CEEEEecCCCCEEEEEE
Confidence 7754 45666665667777665
No 303
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.05 E-value=0.11 Score=43.62 Aligned_cols=160 Identities=10% Similarity=0.090 Sum_probs=96.3
Q ss_pred CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC----C--CCeEEEEE---cCCCCEEEEEe-
Q psy2107 154 HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH----E--RGLETVTV---SESRQQFATGG- 223 (391)
Q Consensus 154 ~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~----~--~~v~~l~~---~~~~~~l~sg~- 223 (391)
...--.+++|.+. ++.++++.-..++|..|+.. .+....+ .+.+- . ..+..|.| .|+++++++..
T Consensus 11 ~~~yPE~~~wd~~--~g~~~vs~l~~g~V~~~~~~--~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~ 85 (334)
T 2p9w_A 11 KNLTPEDTIYDRT--RQVFYQSNLYKGRIEVYNPK--TQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKN 85 (334)
T ss_dssp TTCCCSCEEEETT--TTEEEEEETTTTEEEEECTT--TCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEE
T ss_pred cccCCcCccCcCC--CCEEEEEeccCCEEEEEcCC--CCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcc
Confidence 3344557888432 45555555579999999842 2322323 23221 1 13579999 68877777543
Q ss_pred ------------CCCcEEEEECC---CCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc-----------cCc
Q psy2107 224 ------------WDCLLKIWSAD---ISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH-----------KEA 277 (391)
Q Consensus 224 ------------~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~ 277 (391)
.+..|..+|+. +++.. ....+... ...
T Consensus 86 ~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~---------------------------~~~dL~~~~~~~~~~~g~~~~~ 138 (334)
T 2p9w_A 86 AKSFNFADQSSHGASSFHSFNLPLSENSKPV---------------------------WSVNFEKVQDEFEKKAGKRPFG 138 (334)
T ss_dssp TTTTCTTSCCSSSCCEEEEEESSCCTTCCCS---------------------------EEEESHHHHHHHHHHHSSCCEE
T ss_pred cccccccccccCCCCEEEEEcCCcCCCCCEE---------------------------EEecCccccccccccccccccC
Confidence 25778899987 43321 11111111 123
Q ss_pred ccEEEeccCCe-EEEEECC-CeEEEEecccCceeEEEE-CC------eeeEEEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107 278 ISAVQWTAVDE-IITSSWD-HTLKIWDAELGGMKSEIV-GN------KSFFDVHYSPLSKLVITASADKQIRLYDPKV 346 (391)
Q Consensus 278 v~~~~~~~~~~-l~s~~~d-g~i~iwd~~~~~~~~~~~-~~------~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~ 346 (391)
...++..+.+. .++++.. +.|...+... +....+. .. ...+.+++.|+|+.|++....|.+..+|+..
T Consensus 139 ~nDvavD~~GnaYVt~s~~~~~I~rV~pdG-~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 139 VVQSAQDRDGNSYVAFALGMPAIARVSADG-KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEEEECTTSCEEEEEEESSCEEEEECTTS-CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CceeEECCCCCEEEeCCCCCCeEEEEeCCC-CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 66788886655 5557777 7776666543 3233221 11 1366899999999888876699999999874
No 304
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.99 E-value=0.23 Score=46.28 Aligned_cols=217 Identities=8% Similarity=-0.002 Sum_probs=117.9
Q ss_pred CCCeEEEEcCCCce--EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEE
Q psy2107 134 YDHSVHIWTRRGEH--KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVT 211 (391)
Q Consensus 134 ~dg~i~iwd~~~~~--~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~ 211 (391)
....|+..++++.. .......-.....++|.+. ++.++++-...+.|..++++ ... .....+.........++
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~--~~~ly~sD~~~~~I~r~~~~--g~~-~~~~v~~~~~~~P~GlA 90 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFS--HGLIYWSDVSEEAIKRTEFN--KTE-SVQNVVVSGLLSPDGLA 90 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETT--TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCEEEEE
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeC--CCEEEEEECCCCeEEEEEcc--CCC-ceEEEEeCCCCCcCeEE
Confidence 34567888875532 2223334455778999542 45556665567888888754 211 11122333335788999
Q ss_pred EcCCCCEE-EEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeE
Q psy2107 212 VSESRQQF-ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEI 289 (391)
Q Consensus 212 ~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l 289 (391)
+.+.+..| ++-...+.|.+.+++... ........-.....|++.| .+.|
T Consensus 91 vD~~~~~ly~~d~~~~~I~v~~~dG~~-----------------------------~~~l~~~~l~~P~~Iavdp~~g~l 141 (619)
T 3s94_A 91 CDWLGEKLYWTDSETNRIEVSNLDGSL-----------------------------RKVLFWQELDQPRAIALDPSSGFM 141 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCS-----------------------------CEEEECSSCSCCCCEEEETTTTEE
T ss_pred EEecCCEEEEEeCCCCEEEEEECCCCC-----------------------------EEEEEeCCCCCCceEEEecCCCeE
Confidence 99855544 455567889999986421 1111112334466888885 4666
Q ss_pred EEEEC--CCeEEEEecccCceeEEEEC--CeeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCcceEEEEeccccCcEE
Q psy2107 290 ITSSW--DHTLKIWDAELGGMKSEIVG--NKSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQ 364 (391)
Q Consensus 290 ~s~~~--dg~i~iwd~~~~~~~~~~~~--~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 364 (391)
+.+.. .+.|...++. |.....+.. -.....+++++++..|..+ ...+.|..+|+.......+.. +......
T Consensus 142 y~tD~g~~~~I~r~~~d-G~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~---~~~~~P~ 217 (619)
T 3s94_A 142 YWTDWGEVPKIERAGMD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK---GSLPHPF 217 (619)
T ss_dssp EEEECSSSCEEEEEETT-SCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC------------CC
T ss_pred EEeccCCCCEEEEEECC-CCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEe---CCCCCce
Confidence 66653 3566666654 333333322 2356889999876655544 456789999986533222211 1122235
Q ss_pred EEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 365 SVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 365 ~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
+|++.. + .++++-...+.|...|.
T Consensus 218 gi~~~~-~-~ly~td~~~~~V~~~d~ 241 (619)
T 3s94_A 218 ALTLFE-D-ILYWTDWSTHSILACNK 241 (619)
T ss_dssp CEEESS-S-EEEEECTTTCSEEEEES
T ss_pred EEEEeC-C-EEEEecCCCCEEEEEEC
Confidence 667765 3 55666656667766653
No 305
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.93 E-value=0.36 Score=48.55 Aligned_cols=112 Identities=13% Similarity=0.156 Sum_probs=70.3
Q ss_pred ccCcccEEEeccCCeEEEEECCCeEEEEecccCceeE-EEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceE
Q psy2107 274 HKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKS-EIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIV 352 (391)
Q Consensus 274 ~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~ 352 (391)
..++|++++--. ++|++|- ..+|++|++...+.+. .......+..+.....++++++|..-..|.++..+.......
T Consensus 884 v~g~v~al~~~~-g~Lla~i-g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~ 961 (1158)
T 3ei3_A 884 VKGAVYSMVEFN-GKLLASI-NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFE 961 (1158)
T ss_dssp ESSCEEEEEEET-TEEEEEE-TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEE
T ss_pred cCCcCEEEeeeC-CEEEEEc-CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEE
Confidence 367788887554 4655554 5899999998765444 111111233223333578999998888888876543333322
Q ss_pred EEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107 353 KSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 353 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 389 (391)
...-..+..+++++.+-. +. .++.+..+|.+.+..
T Consensus 962 ~~a~D~~~~~vta~~~ld-~~-t~l~aD~~gNl~vl~ 996 (1158)
T 3ei3_A 962 EIARDFNPNWMSAVEILD-DD-NFLGAENAFNLFVCQ 996 (1158)
T ss_dssp EEEECCSCBCEEEEEEEE-TT-EEEEEETTSEEEEEE
T ss_pred EEEeecccccEEEEEEEc-cC-cEEEEcCCCcEEEEe
Confidence 222334567899999875 33 577788999988875
No 306
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.88 E-value=0.16 Score=42.60 Aligned_cols=218 Identities=11% Similarity=0.106 Sum_probs=127.9
Q ss_pred CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCC-
Q psy2107 126 NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHE- 204 (391)
Q Consensus 126 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~- 204 (391)
.+.+|.=. ..++.|+|++.+....-......|.-=.|. +++ .|+-.+ +..|..|++.. ...+...+..|.
T Consensus 78 ~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWi--s~~--~L~lVT-~taVyHWs~~~---~s~P~kvFdR~~~ 148 (365)
T 2xzh_A 78 SKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWI--SLN--TVALVT-DNAVYHWSMEG---ESQPVKMFDRHSS 148 (365)
T ss_dssp SSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEEC--SSS--EEEEEE-SSEEEEEESST---TCCCEEEEECCGG
T ss_pred ccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEec--CCC--eEEEEc-CCcEEEEcccC---CCCCceeeecchh
Confidence 34444444 678999999666544433445678777884 223 344333 56799999642 335566666553
Q ss_pred ---CCeEEEEEcCCCCEEEEEe-------CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc
Q psy2107 205 ---RGLETVTVSESRQQFATGG-------WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH 274 (391)
Q Consensus 205 ---~~v~~l~~~~~~~~l~sg~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (391)
..|..-..+++.++++..+ -.|.+.+|..+. +.-+.+.+|
T Consensus 149 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er------------------------------~~sQ~ieGh 198 (365)
T 2xzh_A 149 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR------------------------------KVSQPIEGH 198 (365)
T ss_dssp GTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT------------------------------TEEEEECCS
T ss_pred cccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc------------------------------cccceeeee
Confidence 3566777788888776543 236788888863 345567777
Q ss_pred cCcccEEEeccC----CeEEEEEC---CCeEEEEecccC---cee-----EEEE--C---CeeeEEEEECCCCCEEEEee
Q psy2107 275 KEAISAVQWTAV----DEIITSSW---DHTLKIWDAELG---GMK-----SEIV--G---NKSFFDVHYSPLSKLVITAS 334 (391)
Q Consensus 275 ~~~v~~~~~~~~----~~l~s~~~---dg~i~iwd~~~~---~~~-----~~~~--~---~~~i~~~~~~p~~~~l~~g~ 334 (391)
......+..... ..++.+.. .+.++|-++... ... ..+. . ..=..++..++....+..-+
T Consensus 199 aa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviT 278 (365)
T 2xzh_A 199 AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT 278 (365)
T ss_dssp EEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEE
T ss_pred eeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEe
Confidence 665444443311 12333322 268999888432 111 1111 1 11234677787778888888
Q ss_pred CCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEE
Q psy2107 335 ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 386 (391)
Q Consensus 335 ~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~ 386 (391)
.-|.|++||+.++. ++..-+-...+|...+-+...+- ++.....|.|.
T Consensus 279 K~G~ihlyDleTgt---~i~~nrIS~d~iF~ta~~~~~~G-i~~Vnr~GqVl 326 (365)
T 2xzh_A 279 KYGYIHLYDLETGT---CIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVL 326 (365)
T ss_dssp TTSEEEEEETTTCC---EEEEEECCSSCEEEEEEEGGGTE-EEEEETTCEEE
T ss_pred CCcEEEEEEcccCc---EEEEeccCCCceEEecccCCCCc-EEEEcCCCEEE
Confidence 99999999999877 55544444555655444332222 44444555543
No 307
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.84 E-value=0.2 Score=43.10 Aligned_cols=246 Identities=11% Similarity=0.042 Sum_probs=118.1
Q ss_pred EEEEEec--CCEEEEEECCCeEEEEcCCCceEEe---c----cCCCCCeeEEEEEecCCC----CeEEEEEeC-------
Q psy2107 119 VSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLN---I----PGHGGPVKGVAWLYNDGK----DAAFISVST------- 178 (391)
Q Consensus 119 V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~---~----~~~~~~v~~l~~~~~~~~----~~~l~s~~~------- 178 (391)
-..|+|. ++.++.+...|.|++++.++..... + .........+++ +++ +.+.++-+.
T Consensus 20 P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~---~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 20 PWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVL---APDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp EEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEE---CTTHHHHCEEEEEEEEECSSSCE
T ss_pred cEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEE---CCCCCCCCEEEEEEeCCCCCCCc
Confidence 4577886 5525566678999999865432211 1 112345678999 553 444444332
Q ss_pred CCcEEEEeecCCCCceeEEEE-Eec------CCCCeEEEEEcCCCCEEEEEeCC-------------CcEEEEECCCCCC
Q psy2107 179 DQTAMIWEWKVESNSIECIHV-CRG------HERGLETVTVSESRQQFATGGWD-------------CLLKIWSADISKE 238 (391)
Q Consensus 179 dg~v~iwd~~~~~~~~~~~~~-~~~------~~~~v~~l~~~~~~~~l~sg~~d-------------g~i~iwd~~~~~~ 238 (391)
...|..|++............ +.. ....-..|+|.|+|.+.++-+.. |.|.-++.+..-.
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 224555554322222221221 111 11224579999999665554332 3455555432100
Q ss_pred CCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEEEEECCC--eEEEEecccC---------
Q psy2107 239 RGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITSSWDH--TLKIWDAELG--------- 306 (391)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~dg--~i~iwd~~~~--------- 306 (391)
.. .+... .......+ .-.++. ....++|++ .+.|+++.... .=.|.-+..+
T Consensus 177 ~~------npf~~---------~~~~~~~i-~a~G~r-np~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~ 239 (353)
T 2g8s_A 177 DD------NPFIK---------ESGVRAEI-WSYGIR-NPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLAT 239 (353)
T ss_dssp TT------CTTTT---------STTSCTTE-EEECCS-EEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBC
T ss_pred CC------CCCcC---------CCCCCccE-EEEcCc-CccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCcc
Confidence 00 00000 00001111 112333 356788887 77877765432 1122111111
Q ss_pred ----------------------ceeEEEECCeeeEEEEECC-------CCCEEEEeeCCCcEEEEcCCCCCcceEEEEec
Q psy2107 307 ----------------------GMKSEIVGNKSFFDVHYSP-------LSKLVITASADKQIRLYDPKVKEGAIVKSTFS 357 (391)
Q Consensus 307 ----------------------~~~~~~~~~~~i~~~~~~p-------~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~ 357 (391)
.+...+..+.....++|.. +|.++++....+.|...++...........+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~ 319 (353)
T 2g8s_A 240 WGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILT 319 (353)
T ss_dssp SSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESG
T ss_pred CCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEccc
Confidence 1122333344566777753 46677776677888888776432111111222
Q ss_pred cccCcEEEEEECCCCCCEEEE-eeCCCcE
Q psy2107 358 SHKEWVQSVRWSPIDPQLFVS-ASFDNSV 385 (391)
Q Consensus 358 ~h~~~v~~~~~~~~~~~~l~s-~~~dg~v 385 (391)
.....+..+++.|++ .++++ -..+|.|
T Consensus 320 ~~~~rp~~v~~~pdG-~lyv~td~~~g~I 347 (353)
T 2g8s_A 320 DRGQRIRDVRTGPDG-YLYVLTDESSGEL 347 (353)
T ss_dssp GGCCCEEEEEECTTS-CEEEEECSTTEEE
T ss_pred CCCCceeEEEECCCC-cEEEEEeCCCCEE
Confidence 334579999999955 45543 3234543
No 308
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.81 E-value=0.23 Score=43.43 Aligned_cols=217 Identities=12% Similarity=0.102 Sum_probs=130.8
Q ss_pred CEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCC--
Q psy2107 127 DWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHE-- 204 (391)
Q Consensus 127 ~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-- 204 (391)
+.+|.=. ..++.|+|++.+....-......|.-=.|... + .|+-.+ +..|..|++.. ...+...+..|.
T Consensus 78 ~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~--~--~l~lVT-~taVyHWsi~~---~s~P~kvFdR~~~L 148 (494)
T 1bpo_A 78 KVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL--N--TVALVT-DNAVYHWSMEG---ESQPVKMFDRHSSL 148 (494)
T ss_dssp SCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEET--T--EEEEEC-SSEEEEEESSS---SCCCEEEEECCGGG
T ss_pred cEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCC--C--eEEEEc-CCeeEEecccC---CCCchhheecchhc
Confidence 3444433 67999999966554443334567777788632 3 344333 56899999642 335666666553
Q ss_pred --CCeEEEEEcCCCCEEEEEe-------CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCcc
Q psy2107 205 --RGLETVTVSESRQQFATGG-------WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHK 275 (391)
Q Consensus 205 --~~v~~l~~~~~~~~l~sg~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (391)
..|..-..+++.++++..| -.|.+.+|..+. +.-+.+.+|.
T Consensus 149 ~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er------------------------------~~sQ~ieGha 198 (494)
T 1bpo_A 149 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR------------------------------KVSQPIEGHA 198 (494)
T ss_dssp TTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT------------------------------CCEEEECCSE
T ss_pred ccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc------------------------------cccchheeee
Confidence 4566777788888876443 236788888863 4456677887
Q ss_pred CcccEEEeccC----CeEEEEEC---CCeEEEEecccC---ce---eEEEE----C---CeeeEEEEECCCCCEEEEeeC
Q psy2107 276 EAISAVQWTAV----DEIITSSW---DHTLKIWDAELG---GM---KSEIV----G---NKSFFDVHYSPLSKLVITASA 335 (391)
Q Consensus 276 ~~v~~~~~~~~----~~l~s~~~---dg~i~iwd~~~~---~~---~~~~~----~---~~~i~~~~~~p~~~~l~~g~~ 335 (391)
.....+..... ..++.+.. .+.++|-++... .. .+... . ..-..++..++....+..-+.
T Consensus 199 a~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK 278 (494)
T 1bpo_A 199 ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK 278 (494)
T ss_dssp EEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEET
T ss_pred eeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEec
Confidence 66555554421 12333333 378999988543 11 11111 1 112356788888888888889
Q ss_pred CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEE
Q psy2107 336 DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 386 (391)
Q Consensus 336 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~ 386 (391)
-|.|++||+.++. ++..-+-...+|...+-+...+- ++.....|.|.
T Consensus 279 ~G~i~lyDleTgt---~i~~nrIs~~~iF~t~~~~~~~G-i~~Vnr~GqVl 325 (494)
T 1bpo_A 279 YGYIHLYDLETGT---CIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVL 325 (494)
T ss_dssp TSEEEEEETTTCC---EEEEEECCSSCEEEEEEETTTTE-EEEEETTCEEE
T ss_pred CceEEEEecccce---eeeeecccCCceEEecccCCCCc-EEEEccCceEE
Confidence 9999999999877 55544445555655555442332 44444556543
No 309
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.80 E-value=0.098 Score=43.76 Aligned_cols=188 Identities=10% Similarity=0.149 Sum_probs=93.8
Q ss_pred EEecCCEEEEEECC-----CeEEEEcCCCceEEeccC---CCCCeeEEEEEecCCCCeEEEEEeCCC-----cEEEEeec
Q psy2107 122 IDFHNDWILTGCYD-----HSVHIWTRRGEHKLNIPG---HGGPVKGVAWLYNDGKDAAFISVSTDQ-----TAMIWEWK 188 (391)
Q Consensus 122 ~~~~~~~l~t~~~d-----g~i~iwd~~~~~~~~~~~---~~~~v~~l~~~~~~~~~~~l~s~~~dg-----~v~iwd~~ 188 (391)
+...+.+++.|+.+ ..+.+||.....-..+.. ......++.+ ++.+++.|+.++ .+.+||
T Consensus 58 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~~~d-- 130 (302)
T 2xn4_A 58 VYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL-----NGLLYAVGGFDGSTGLSSVEAYN-- 130 (302)
T ss_dssp EEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-----TTEEEEEEEECSSCEEEEEEEEE--
T ss_pred EEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE-----CCEEEEEcCCCCCccCceEEEEe--
Confidence 34456677777755 358888885544333321 1122222333 566777777654 355666
Q ss_pred CCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC-------CcEEEEECCCCCCCCCCCCCCCCCcccccccccccc
Q psy2107 189 VESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD-------CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSS 261 (391)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (391)
..+..+..+..+........++.+ ++++++.|+.+ ..+.+||+.+.+-.
T Consensus 131 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~---------------------- 186 (302)
T 2xn4_A 131 IKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWT---------------------- 186 (302)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEE----------------------
T ss_pred CCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEE----------------------
Confidence 445555555433322222222222 56667776643 34778887653211
Q ss_pred CCCCCceeeecCccCcccEEEeccCCeEEEEECC-----CeEEEEecccCceeEEEECCe---eeEEEEECCCCCEEEEe
Q psy2107 262 ASSRTPLITLKGHKEAISAVQWTAVDEIITSSWD-----HTLKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVITA 333 (391)
Q Consensus 262 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~~g 333 (391)
.+..+...... .++....+..++.|+.+ ..+.+||+.+.+-...-.... ....+.+ ++++++.|
T Consensus 187 -----~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~G 258 (302)
T 2xn4_A 187 -----YIAEMSTRRSG-AGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVVG 258 (302)
T ss_dssp -----EECCCSSCCBS-CEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred -----ECCCCcccccc-ccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEEC
Confidence 00011111111 12222344456666554 368899988765432211111 1112222 56777777
Q ss_pred eCCC-----cEEEEcCCCCC
Q psy2107 334 SADK-----QIRLYDPKVKE 348 (391)
Q Consensus 334 ~~dg-----~i~iwd~~~~~ 348 (391)
+.++ .+.+||+.+..
T Consensus 259 G~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 259 GDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp CBCSSSBCCCEEEEETTTTE
T ss_pred CcCCCcccccEEEEcCCCCe
Confidence 7553 48899987653
No 310
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.75 E-value=0.0069 Score=57.47 Aligned_cols=193 Identities=12% Similarity=0.032 Sum_probs=100.6
Q ss_pred cEEEEEec--CCEEE-EEECCCeEEEEcCCC----ceEEe-ccCCCCCeeEEEEEecCC-CCeEEEEEeCCCcEEEEeec
Q psy2107 118 WVSAIDFH--NDWIL-TGCYDHSVHIWTRRG----EHKLN-IPGHGGPVKGVAWLYNDG-KDAAFISVSTDQTAMIWEWK 188 (391)
Q Consensus 118 ~V~~~~~~--~~~l~-t~~~dg~i~iwd~~~----~~~~~-~~~~~~~v~~l~~~~~~~-~~~~l~s~~~dg~v~iwd~~ 188 (391)
.+.+++|+ +..|+ +-...+.|+.+++.+ ..... +.........|++ +. .+.++++-...+.|.++++.
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glav---D~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV---DWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEEC---CCSSSBCEECCTTTSCEEEEBSS
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEE---EeeCCcEEEEeccCCeEEEEecC
Confidence 34466775 34444 434557888888754 22211 1111223456676 42 44555665667888888843
Q ss_pred CCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC-C-CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107 189 VESNSIECIHVCRGHERGLETVTVSESRQQFATGGW-D-CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT 266 (391)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (391)
..... ..+.........|+++|.+.+|+.+.. . +.|..++++...
T Consensus 484 --g~~~~--~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~----------------------------- 530 (699)
T 1n7d_A 484 --GVKRK--TLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD----------------------------- 530 (699)
T ss_dssp --SCCEE--EECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-----------------------------
T ss_pred --CCceE--EEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-----------------------------
Confidence 22211 122222345678889886554544432 2 567666654311
Q ss_pred ceeeecCccCcccEEEecc-CCeEEEE-ECCCeEEEEecccCceeEEEEC-C---eeeEEEEECCCCCEEEEeeCCCcEE
Q psy2107 267 PLITLKGHKEAISAVQWTA-VDEIITS-SWDHTLKIWDAELGGMKSEIVG-N---KSFFDVHYSPLSKLVITASADKQIR 340 (391)
Q Consensus 267 ~~~~~~~~~~~v~~~~~~~-~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~-~---~~i~~~~~~p~~~~l~~g~~dg~i~ 340 (391)
........-.....|++++ ++.|+.+ +..+.|..+|+.... ...+.. . .....+++..+ .++++....+.|.
T Consensus 531 ~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~ 608 (699)
T 1n7d_A 531 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIF 608 (699)
T ss_dssp CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-CEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEE
T ss_pred eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-eEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEE
Confidence 0011111123456789984 4555555 456789999986433 233321 1 12344555443 4555556678899
Q ss_pred EEcCCCCC
Q psy2107 341 LYDPKVKE 348 (391)
Q Consensus 341 iwd~~~~~ 348 (391)
.++..+++
T Consensus 609 ~~d~~~G~ 616 (699)
T 1n7d_A 609 SANRLTGS 616 (699)
T ss_dssp EEETTTEE
T ss_pred EEEccCCC
Confidence 99875543
No 311
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.71 E-value=0.051 Score=47.23 Aligned_cols=105 Identities=15% Similarity=0.172 Sum_probs=72.3
Q ss_pred cCCeEEEEECCCeEEEEecccCceeEEEECC-----eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC---c------c
Q psy2107 285 AVDEIITSSWDHTLKIWDAELGGMKSEIVGN-----KSFFDVHYSPLSKLVITASADKQIRLYDPKVKE---G------A 350 (391)
Q Consensus 285 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~---~------~ 350 (391)
.+..++.+ .++.||.-++.....-+.+..+ ..+..+..+|+|++||..+ +..|.|-.+..+. . +
T Consensus 31 n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccc
Confidence 33444444 3588998888755555555554 2678899999999999886 6679998876321 0 1
Q ss_pred eEEEEecc------ccCcEEEEEECCCC--CCEEEEeeCCCcEEEEecC
Q psy2107 351 IVKSTFSS------HKEWVQSVRWSPID--PQLFVSASFDNSVKLWDLR 391 (391)
Q Consensus 351 ~~~~~~~~------h~~~v~~~~~~~~~--~~~l~s~~~dg~v~iwdlr 391 (391)
.....+.- ...+|..+.|+|-+ +..|++-..|+.|++||+.
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~ 157 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDIL 157 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETT
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcc
Confidence 11122221 25679999999954 3378999999999999984
No 312
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.59 E-value=0.47 Score=44.24 Aligned_cols=195 Identities=9% Similarity=-0.003 Sum_probs=107.4
Q ss_pred CcEEEEEec--CCEEE-EEECCCeEEEEcCCCce--EEeccCCCCCeeEEEEEecCC-CCeEEEEEeCCCcEEEEeecCC
Q psy2107 117 DWVSAIDFH--NDWIL-TGCYDHSVHIWTRRGEH--KLNIPGHGGPVKGVAWLYNDG-KDAAFISVSTDQTAMIWEWKVE 190 (391)
Q Consensus 117 ~~V~~~~~~--~~~l~-t~~~dg~i~iwd~~~~~--~~~~~~~~~~v~~l~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~ 190 (391)
....+++|+ ++.|+ +-...+.|..+++++.. ...+...-.....+++ +. .++++++-...+.|.+.+++
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAv---D~~~~~ly~~d~~~~~I~v~~~d-- 114 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLAC---DWLGEKLYWTDSETNRIEVSNLD-- 114 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEE---ETTTTEEEEEETTTTEEEEEETT--
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEE---EecCCEEEEEeCCCCEEEEEECC--
Confidence 356688887 44444 44456789888886542 2222222356778888 44 45566666778899998854
Q ss_pred CCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCce
Q psy2107 191 SNSIECIHVCRGHERGLETVTVSESRQQFATGGW--DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPL 268 (391)
Q Consensus 191 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (391)
......+ ....-.....|++.|.+..|+.... .+.|...+++... ..
T Consensus 115 G~~~~~l--~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~-----------------------------~~ 163 (619)
T 3s94_A 115 GSLRKVL--FWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-----------------------------RF 163 (619)
T ss_dssp SCSCEEE--ECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS-----------------------------CE
T ss_pred CCCEEEE--EeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc-----------------------------eE
Confidence 2222222 2233455778999997555555443 3566666664311 11
Q ss_pred eeecCccCcccEEEecc-CCeEEEE-ECCCeEEEEecccCceeEEEE-CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCC
Q psy2107 269 ITLKGHKEAISAVQWTA-VDEIITS-SWDHTLKIWDAELGGMKSEIV-GNKSFFDVHYSPLSKLVITASADKQIRLYDPK 345 (391)
Q Consensus 269 ~~~~~~~~~v~~~~~~~-~~~l~s~-~~dg~i~iwd~~~~~~~~~~~-~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~ 345 (391)
......-.....+++++ .+.|+.+ ...+.|...|+.......... .-.....+++..+ ..+++-...+.|...|..
T Consensus 164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~ 242 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKY 242 (619)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESS
T ss_pred EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECC
Confidence 11112233457788884 5666666 446788888886433222222 1112345677654 444555567788888876
Q ss_pred CCC
Q psy2107 346 VKE 348 (391)
Q Consensus 346 ~~~ 348 (391)
+++
T Consensus 243 tg~ 245 (619)
T 3s94_A 243 TGE 245 (619)
T ss_dssp SCC
T ss_pred CCc
Confidence 543
No 313
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.58 E-value=0.26 Score=41.07 Aligned_cols=189 Identities=13% Similarity=0.203 Sum_probs=96.1
Q ss_pred EEEecCCEEEEEECC-----CeEEEEcCCCce---EEe---ccCCCCCeeEEEEEecCCCCeEEEEEeCCC-----cEEE
Q psy2107 121 AIDFHNDWILTGCYD-----HSVHIWTRRGEH---KLN---IPGHGGPVKGVAWLYNDGKDAAFISVSTDQ-----TAMI 184 (391)
Q Consensus 121 ~~~~~~~~l~t~~~d-----g~i~iwd~~~~~---~~~---~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg-----~v~i 184 (391)
++...+.+++.|+.+ ..+.+||..... -.. +........++.+ ++.+++.|+.++ .+.+
T Consensus 58 ~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~-----~~~lyv~GG~~~~~~~~~~~~ 132 (301)
T 2vpj_A 58 SVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL-----GDMIYVSGGFDGSRRHTSMER 132 (301)
T ss_dssp EEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE-----TTEEEEECCBCSSCBCCEEEE
T ss_pred EEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE-----CCEEEEEcccCCCcccceEEE
Confidence 334557777777765 468899984333 222 2221222222333 566777776543 4666
Q ss_pred EeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCCCCCCCCCCCCCCcccccccccc
Q psy2107 185 WEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD-----CLLKIWSADISKERGDPSENGDEGTTSKKRKKEY 259 (391)
Q Consensus 185 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (391)
|| .....+..+..+........++.+ ++++++.|+.+ ..+.+||+.+.+-.
T Consensus 133 ~d--~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-------------------- 188 (301)
T 2vpj_A 133 YD--PNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWT-------------------- 188 (301)
T ss_dssp EE--TTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEE--------------------
T ss_pred Ec--CCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEE--------------------
Confidence 77 445566665544432222223333 56677777754 35778887653321
Q ss_pred ccCCCCCceeeecCccCcccEEEeccCCeEEEEECC-----CeEEEEecccCceeEEEECCe---eeEEEEECCCCCEEE
Q psy2107 260 SSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWD-----HTLKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVI 331 (391)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~ 331 (391)
.+..+...... .++....+..++.|+.+ ..+.+||+.+.+-...-..+. ....+.+ ++++++
T Consensus 189 -------~~~~~p~~r~~-~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v 258 (301)
T 2vpj_A 189 -------NVTPMATKRSG-AGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYA 258 (301)
T ss_dssp -------EECCCSSCCBS-CEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEE
T ss_pred -------eCCCCCccccc-ceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEE
Confidence 01011111111 12222233445666553 468899998765433221111 1122222 567777
Q ss_pred EeeCC-----CcEEEEcCCCCC
Q psy2107 332 TASAD-----KQIRLYDPKVKE 348 (391)
Q Consensus 332 ~g~~d-----g~i~iwd~~~~~ 348 (391)
.|+.+ ..+.+||+.+.+
T Consensus 259 ~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 259 IAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp ECCBCSSSBEEEEEEEETTTTE
T ss_pred EcCcCCCcccccEEEEcCCCCe
Confidence 77655 457888887654
No 314
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.55 E-value=0.41 Score=42.99 Aligned_cols=244 Identities=9% Similarity=0.048 Sum_probs=132.1
Q ss_pred cEEEEEecC---C-EEEEEECCCeEEEEcCCCceEEeccCCC----CCeeEEEE-------EecCCCCeEEEEEeCCC-c
Q psy2107 118 WVSAIDFHN---D-WILTGCYDHSVHIWTRRGEHKLNIPGHG----GPVKGVAW-------LYNDGKDAAFISVSTDQ-T 181 (391)
Q Consensus 118 ~V~~~~~~~---~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~----~~v~~l~~-------~~~~~~~~~l~s~~~dg-~ 181 (391)
.-..|+|++ + ++++....+.|++.|++...+..+..-. .....++| .+ ++..|+.+...+ .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~---~G~~lyvad~~~~~ 216 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYAD---EAEYMIVAIDYDGK 216 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBC---TTCEEEEEECCCTT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCC---CCCEEEEEeCCCCC
Confidence 455777774 2 4555454577999999877776654322 24677887 54 455454444433 2
Q ss_pred ------EEEEeecCCCCce------eEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECC-------CCCCCCC
Q psy2107 182 ------AMIWEWKVESNSI------ECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLLKIWSAD-------ISKERGD 241 (391)
Q Consensus 182 ------v~iwd~~~~~~~~------~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~-------~~~~~~~ 241 (391)
|.+++... .... ..+..+ .....++++| ++.++++-..++.|..+|+. ++.....
T Consensus 217 ~~~~~~V~~i~r~~-~G~~~~~~~~~~v~~~----~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp 291 (496)
T 3kya_A 217 GDESPSVYIIKRNA-DGTFDDRSDIQLIAAY----KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDP 291 (496)
T ss_dssp GGGEEEEEEEECCT-TSCCSTTSCEEEEEEE----SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCC
T ss_pred cccCceEEEEecCC-CCceeecccceeeccC----CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecc
Confidence 44554221 0121 222222 2345778899 45555666677889999986 3221000
Q ss_pred CCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEE-ECCCeEEEEecc--cCce--eEEEECC
Q psy2107 242 PSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITS-SWDHTLKIWDAE--LGGM--KSEIVGN 315 (391)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~-~~dg~i~iwd~~--~~~~--~~~~~~~ 315 (391)
..... . .....+... ........++|+|++. |+.+ +..+.|+.++.. .+.. ...+.+.
T Consensus 292 ~~~~~--------------~-g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~ 355 (496)
T 3kya_A 292 IVKNN--------------P-NTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGG 355 (496)
T ss_dssp BGGGC--------------T-TTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEB
T ss_pred ccccc--------------c-cccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCC
Confidence 00000 0 000011111 1233457899997765 5555 456788886643 3321 1222211
Q ss_pred ----------------eeeE-EEEEC-------CCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc------------
Q psy2107 316 ----------------KSFF-DVHYS-------PLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH------------ 359 (391)
Q Consensus 316 ----------------~~i~-~~~~~-------p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h------------ 359 (391)
.... .++.. +++.++++=..+.+|+.++. .+. +.++.+.
T Consensus 356 ~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~----v~TiaG~g~~~~~~~~~~~ 430 (496)
T 3kya_A 356 YKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGI----VSTYAGRGASTSLADGNQW 430 (496)
T ss_dssp TTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCB----EEEEEESCTTHHHHHSCSC
T ss_pred CCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CCC----EEEEecccccccccCcccc
Confidence 0123 44444 45667776677889999984 332 2222211
Q ss_pred ------------cCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 360 ------------KEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 360 ------------~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
-.....|+++++++.++++=.....|+.+++
T Consensus 431 G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~ 473 (496)
T 3kya_A 431 GTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISM 473 (496)
T ss_dssp CCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred ccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEEC
Confidence 1347899999854677777777888998875
No 315
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.53 E-value=0.26 Score=41.42 Aligned_cols=92 Identities=11% Similarity=0.073 Sum_probs=45.9
Q ss_pred cCCeEEEEEC-C-----CeEEEEecccCceeEEEECCe---eeEEEEECCCCCEEEEeeCCC-----cEEEEcCCCCCcc
Q psy2107 285 AVDEIITSSW-D-----HTLKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVITASADK-----QIRLYDPKVKEGA 350 (391)
Q Consensus 285 ~~~~l~s~~~-d-----g~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~~g~~dg-----~i~iwd~~~~~~~ 350 (391)
.+..++.|+. + ..+.+||..+.+-...-..+. ...++.+ ++++++.|+.++ .+.+||+.+..-.
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence 3344556654 2 468889988764322211111 1122222 567777776554 5888998765422
Q ss_pred eEEEEeccccCcEEEEEECCCCCCEEEEeeCC
Q psy2107 351 IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD 382 (391)
Q Consensus 351 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 382 (391)
.+..+.........+.+ ++.+++.|+.+
T Consensus 226 -~~~~~p~~r~~~~~~~~---~~~l~v~GG~~ 253 (315)
T 4asc_A 226 -PFEAFPQERSSLSLVSL---VGTLYAIGGFA 253 (315)
T ss_dssp -EECCCSSCCBSCEEEEE---TTEEEEEEEEE
T ss_pred -ECCCCCCcccceeEEEE---CCEEEEECCcc
Confidence 12122212222233333 45677777764
No 316
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.50 E-value=0.55 Score=43.86 Aligned_cols=194 Identities=9% Similarity=-0.020 Sum_probs=114.2
Q ss_pred CcEEEEEec--CC-EEEEEECCCeEEEEcCCCceEEeccC-CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCC
Q psy2107 117 DWVSAIDFH--ND-WILTGCYDHSVHIWTRRGEHKLNIPG-HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN 192 (391)
Q Consensus 117 ~~V~~~~~~--~~-~l~t~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 192 (391)
..+.+|+|+ .+ ++++-..++.|+.+++++.....+.. .......+++.+ ..+++.++-...+.|.+.+++ ..
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~--~~~~LY~tD~~~~~I~v~~~d--G~ 112 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDW--LGKNLYWADTGTNRIEVSKLD--GQ 112 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEET--TTTEEEEEETTTTEEEEEETT--ST
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEe--CCCEEEEEECCCCEEEEEecC--CC
Confidence 356788887 33 55565677899999986654333322 223466777732 245566666667888888853 22
Q ss_pred ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee
Q psy2107 193 SIECIHVCRGHERGLETVTVSESRQQFATGGW--DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT 270 (391)
Q Consensus 193 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (391)
....+ +...-.....|++.|....|..... .+.|...+++... ...
T Consensus 113 ~~~~l--~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~------------------------------~~~ 160 (628)
T 4a0p_A 113 HRQVL--VWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE------------------------------RTT 160 (628)
T ss_dssp TCEEE--ECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS------------------------------CEE
T ss_pred cEEEE--EeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc------------------------------eEE
Confidence 22222 2233456789999986555555542 4677777765411 111
Q ss_pred ecCccCcccEEEecc-CCeEEEEE-CCCeEEEEecccCceeEEEE-CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC
Q psy2107 271 LKGHKEAISAVQWTA-VDEIITSS-WDHTLKIWDAELGGMKSEIV-GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK 347 (391)
Q Consensus 271 ~~~~~~~v~~~~~~~-~~~l~s~~-~dg~i~iwd~~~~~~~~~~~-~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~ 347 (391)
+...-.....+++++ .+.|+.+. ..+.|..+|+..... ..+. .-.....+++.. +.++++-...+.|...|..++
T Consensus 161 l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 161 LVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred EECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCC
Confidence 112234567888884 56666664 567899999865433 2222 222345677754 445555555788888886655
Q ss_pred C
Q psy2107 348 E 348 (391)
Q Consensus 348 ~ 348 (391)
+
T Consensus 239 ~ 239 (628)
T 4a0p_A 239 Q 239 (628)
T ss_dssp C
T ss_pred C
Confidence 4
No 317
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.32 E-value=0.45 Score=40.88 Aligned_cols=237 Identities=10% Similarity=0.006 Sum_probs=118.9
Q ss_pred cEEEEEec-CCEEEEEECCCeEEEEcCCCc-eEEecc---CCCCCeeEEEEEecCC-CCeEEEEEeC---C----CcEEE
Q psy2107 118 WVSAIDFH-NDWILTGCYDHSVHIWTRRGE-HKLNIP---GHGGPVKGVAWLYNDG-KDAAFISVST---D----QTAMI 184 (391)
Q Consensus 118 ~V~~~~~~-~~~l~t~~~dg~i~iwd~~~~-~~~~~~---~~~~~v~~l~~~~~~~-~~~~l~s~~~---d----g~v~i 184 (391)
.-..++|. ...|+.+..+|.|++++.++. .+..+. ........|++.|.-. ++.+.++-+. + ..|..
T Consensus 30 ~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r 109 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIR 109 (354)
T ss_dssp CEEEEEEEETTEEEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEE
T ss_pred CCeEEEEcCCCeEEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEE
Confidence 34577886 235666677799999986554 222221 1234578899933211 2444444332 3 45666
Q ss_pred EeecCCCCce---eEE-EEEec-CCCCeEEEEEcCCCCEEEEEeCC-------------CcEEEEECCCCCCCCCCCCCC
Q psy2107 185 WEWKVESNSI---ECI-HVCRG-HERGLETVTVSESRQQFATGGWD-------------CLLKIWSADISKERGDPSENG 246 (391)
Q Consensus 185 wd~~~~~~~~---~~~-~~~~~-~~~~v~~l~~~~~~~~l~sg~~d-------------g~i~iwd~~~~~~~~~~~~~~ 246 (391)
|+........ +.+ ..+.. .......|+|.|+|.++++-+.. |.|.-++.+..-. .
T Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p-----~-- 182 (354)
T 3a9g_A 110 GRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPP-----A-- 182 (354)
T ss_dssp EEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCC-----T--
T ss_pred EEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCC-----C--
Confidence 6643221111 111 11221 11234679999999877664432 2333333321000 0
Q ss_pred CCCccccccccccccCCCC-CceeeecCccCcccEEEecc-CCeEEEEECCC----eEEEEecccC--------------
Q psy2107 247 DEGTTSKKRKKEYSSASSR-TPLITLKGHKEAISAVQWTA-VDEIITSSWDH----TLKIWDAELG-------------- 306 (391)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~dg----~i~iwd~~~~-------------- 306 (391)
.... .....-.++.. ...++|++ .+.|+++.... .|.+.. .+
T Consensus 183 ---------------~npf~~~~i~a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~ 244 (354)
T 3a9g_A 183 ---------------DNPFPNSPIWSYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGR 244 (354)
T ss_dssp ---------------TSSSTTCCEEEECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCC
T ss_pred ---------------CCCCCCCcEEEEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCC
Confidence 0000 01111223333 46788997 67777765432 233322 11
Q ss_pred ----ceeEEE-ECCeeeEEEEEC-------CCCCEEEEeeCCCcEEEEcCCCCCcceEEEE-eccccCcEEEEEECCCCC
Q psy2107 307 ----GMKSEI-VGNKSFFDVHYS-------PLSKLVITASADKQIRLYDPKVKEGAIVKST-FSSHKEWVQSVRWSPIDP 373 (391)
Q Consensus 307 ----~~~~~~-~~~~~i~~~~~~-------p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~ 373 (391)
.++..+ ..+.....++|. .+|.++++....+.|...++.......-... +.+-...+..+++.|++
T Consensus 245 ~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG- 323 (354)
T 3a9g_A 245 GEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDG- 323 (354)
T ss_dssp TTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTS-
T ss_pred CCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCC-
Confidence 122232 223456778883 4577777766677888888764211111122 22334578999999954
Q ss_pred CEEEEee
Q psy2107 374 QLFVSAS 380 (391)
Q Consensus 374 ~~l~s~~ 380 (391)
.++++..
T Consensus 324 ~lyv~~~ 330 (354)
T 3a9g_A 324 GILISTS 330 (354)
T ss_dssp CEEEEEC
T ss_pred cEEEEEe
Confidence 5555553
No 318
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.32 E-value=0.39 Score=40.14 Aligned_cols=189 Identities=9% Similarity=0.053 Sum_probs=94.9
Q ss_pred EEEecCCEEEEEECC----CeEEEEcCCCceEEec---cCCCCCeeEEEEEecCCCCeEEEEEeCC------CcEEEEee
Q psy2107 121 AIDFHNDWILTGCYD----HSVHIWTRRGEHKLNI---PGHGGPVKGVAWLYNDGKDAAFISVSTD------QTAMIWEW 187 (391)
Q Consensus 121 ~~~~~~~~l~t~~~d----g~i~iwd~~~~~~~~~---~~~~~~v~~l~~~~~~~~~~~l~s~~~d------g~v~iwd~ 187 (391)
++.+.+.+++.|+.+ ..+.+||.....-..+ ........++.+ ++.+++.|+.+ ..+.+||.
T Consensus 51 ~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~~~~d~ 125 (306)
T 3ii7_A 51 CVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA-----EGKIYTSGGSEVGNSALYLFECYDT 125 (306)
T ss_dssp EEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE-----TTEEEEECCBBTTBSCCCCEEEEET
T ss_pred EEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE-----CCEEEEECCCCCCCcEeeeEEEEeC
Confidence 334567777777755 6788899855433322 221222222333 56677777765 45777774
Q ss_pred cCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC---------CCcEEEEECCCCCCCCCCCCCCCCCccccccccc
Q psy2107 188 KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW---------DCLLKIWSADISKERGDPSENGDEGTTSKKRKKE 258 (391)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (391)
....+..+..+........++.+ ++++++.|+. -..+.+||+.+.+-.
T Consensus 126 --~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~------------------- 182 (306)
T 3ii7_A 126 --RTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWT------------------- 182 (306)
T ss_dssp --TTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEE-------------------
T ss_pred --CCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEE-------------------
Confidence 45555554333322222222222 5666676654 244778887653211
Q ss_pred cccCCCCCceeeecCccCcccEEEeccCCeEEEEECC-----CeEEEEecccCceeEEEECC--e-eeEEEEECCCCCEE
Q psy2107 259 YSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWD-----HTLKIWDAELGGMKSEIVGN--K-SFFDVHYSPLSKLV 330 (391)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~--~-~i~~~~~~p~~~~l 330 (391)
.+..+...... .++....+..++.|+.+ ..+.+||+.+.+-...-..+ . ...++.+ +++++
T Consensus 183 --------~~~~~p~~r~~-~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~ 251 (306)
T 3ii7_A 183 --------ELCPMIEARKN-HGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVY 251 (306)
T ss_dssp --------EECCCSSCCBS-CEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEE
T ss_pred --------ECCCccchhhc-ceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEE
Confidence 01011111111 12222233445555543 46888998876432221111 1 1222333 56777
Q ss_pred EEeeCC-----CcEEEEcCCCCC
Q psy2107 331 ITASAD-----KQIRLYDPKVKE 348 (391)
Q Consensus 331 ~~g~~d-----g~i~iwd~~~~~ 348 (391)
+.|+.+ ..+.+||+.+.+
T Consensus 252 v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 252 VLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEECBCSSSBCCEEEEEETTTTE
T ss_pred EEeCcCCCeeeeeEEEEcCCCCe
Confidence 777744 568899987754
No 319
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.20 E-value=0.31 Score=40.83 Aligned_cols=188 Identities=11% Similarity=0.117 Sum_probs=92.4
Q ss_pred EecCCEEEEEEC----C-----CeEEEEcCCCceEEeccC---CCCCeeEEEEEecCCCCeEEEEEeCC-----CcEEEE
Q psy2107 123 DFHNDWILTGCY----D-----HSVHIWTRRGEHKLNIPG---HGGPVKGVAWLYNDGKDAAFISVSTD-----QTAMIW 185 (391)
Q Consensus 123 ~~~~~~l~t~~~----d-----g~i~iwd~~~~~~~~~~~---~~~~v~~l~~~~~~~~~~~l~s~~~d-----g~v~iw 185 (391)
...+.+++.|+. + ..+.+||.....-..+.. ......++.+ ++.+++.|+.+ ..+.+|
T Consensus 68 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~~y 142 (308)
T 1zgk_A 68 VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI-----DGHIYAVGGSHGCIHHNSVERY 142 (308)
T ss_dssp EETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE-----TTEEEEECCEETTEECCCEEEE
T ss_pred EECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE-----CCEEEEEcCCCCCcccccEEEE
Confidence 445666776665 2 468888886554433321 1112222333 56677777644 356677
Q ss_pred eecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCCCCCCCCCCCCCCccccccccccc
Q psy2107 186 EWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD-----CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYS 260 (391)
Q Consensus 186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (391)
|. .+..+..+..+........++.+ ++++++.|+.+ ..+.+||+.+.+-..
T Consensus 143 d~--~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-------------------- 198 (308)
T 1zgk_A 143 EP--ERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM-------------------- 198 (308)
T ss_dssp ET--TTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE--------------------
T ss_pred CC--CCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee--------------------
Confidence 73 34455544333322222223333 56677777754 457788876533210
Q ss_pred cCCCCCceeeecCccCcccEEEeccCCeEEEEECC-----CeEEEEecccCceeEEEECCe--eeEEEEECCCCCEEEEe
Q psy2107 261 SASSRTPLITLKGHKEAISAVQWTAVDEIITSSWD-----HTLKIWDAELGGMKSEIVGNK--SFFDVHYSPLSKLVITA 333 (391)
Q Consensus 261 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~--~i~~~~~~p~~~~l~~g 333 (391)
+..+...... .++....+..++.|+.+ ..+.+||+.+.+-...-..+. .-.+++.. ++++++.|
T Consensus 199 -------~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~G 269 (308)
T 1zgk_A 199 -------ITAMNTIRSG-AGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH-QGRIYVLG 269 (308)
T ss_dssp -------CCCCSSCCBS-CEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEEC
T ss_pred -------CCCCCCcccc-ceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE-CCEEEEEc
Confidence 0001111111 12222244445666554 568899988764332211111 11122222 56777777
Q ss_pred eCC-----CcEEEEcCCCCC
Q psy2107 334 SAD-----KQIRLYDPKVKE 348 (391)
Q Consensus 334 ~~d-----g~i~iwd~~~~~ 348 (391)
+.+ ..+.+||+.+.+
T Consensus 270 G~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 270 GYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp CBCSSCBCCEEEEEETTTTE
T ss_pred CcCCCcccceEEEEcCCCCE
Confidence 644 457788877643
No 320
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.09 E-value=0.44 Score=40.85 Aligned_cols=94 Identities=7% Similarity=-0.003 Sum_probs=47.1
Q ss_pred EecCCEEEEEECC-CeEEEEcCCC--ceEEeccCC----CCCeeEEEEEecCCCCeEEEEEeC-C---------CcEEEE
Q psy2107 123 DFHNDWILTGCYD-HSVHIWTRRG--EHKLNIPGH----GGPVKGVAWLYNDGKDAAFISVST-D---------QTAMIW 185 (391)
Q Consensus 123 ~~~~~~l~t~~~d-g~i~iwd~~~--~~~~~~~~~----~~~v~~l~~~~~~~~~~~l~s~~~-d---------g~v~iw 185 (391)
...+.+++.|+.+ ..+.+||... ..-..+..- .....++.+ ++.+++.|+. + ..+.+|
T Consensus 17 ~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~-----~~~lyv~GG~~~~~~~~~~~~~~v~~y 91 (357)
T 2uvk_A 17 IDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI-----DGNLYVFGGIGKNSEGLTQVFNDVHKY 91 (357)
T ss_dssp EETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE-----TTEEEEECCEEECTTSCEEECCCEEEE
T ss_pred EECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE-----CCEEEEEcCCCCCCCccceeeccEEEE
Confidence 3456666666644 4688888842 222222211 111222333 4667777765 2 357777
Q ss_pred eecCCCCceeEEEEEe-cCCCCeEEEEEcCCCCEEEEEeCC
Q psy2107 186 EWKVESNSIECIHVCR-GHERGLETVTVSESRQQFATGGWD 225 (391)
Q Consensus 186 d~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~sg~~d 225 (391)
| ..+..+..+.... .......++. .++++++.|+.+
T Consensus 92 d--~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 92 N--PKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp E--TTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred e--CCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 7 4455555443332 1122222222 466777888764
No 321
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.08 E-value=0.46 Score=39.89 Aligned_cols=107 Identities=10% Similarity=0.075 Sum_probs=54.8
Q ss_pred EEEecCCEEEEEEC----C-------CeEEEEcCCCceEEeccCCCCC---eeEEEEEecCCCCeEEEEEeCC-------
Q psy2107 121 AIDFHNDWILTGCY----D-------HSVHIWTRRGEHKLNIPGHGGP---VKGVAWLYNDGKDAAFISVSTD------- 179 (391)
Q Consensus 121 ~~~~~~~~l~t~~~----d-------g~i~iwd~~~~~~~~~~~~~~~---v~~l~~~~~~~~~~~l~s~~~d------- 179 (391)
++...+.+++.|+. + ..+.+||.....-..+.....+ ...+.+ ++.+++.|+.+
T Consensus 41 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~~lyv~GG~~~~~~~~~ 115 (315)
T 4asc_A 41 LVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA-----LNSIYVVGGREIKDGERC 115 (315)
T ss_dssp EECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE-----TTEEEEECCEESSTTCCB
T ss_pred EEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE-----CCEEEEEeCCcCCCCCcc
Confidence 33445777777874 1 1277788865443333221111 112222 55677777632
Q ss_pred -CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC-C-----CcEEEEECCCC
Q psy2107 180 -QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW-D-----CLLKIWSADIS 236 (391)
Q Consensus 180 -g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-d-----g~i~iwd~~~~ 236 (391)
..+.+||. .+..+..+..+........++. -++++++.|+. + ..+.+||..+.
T Consensus 116 ~~~~~~~d~--~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 116 LDSVMCYDR--LSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp CCCEEEEET--TTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred cceEEEECC--CCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 35777774 4445554433332222222222 35567777776 2 45788887653
No 322
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.05 E-value=0.48 Score=39.86 Aligned_cols=82 Identities=20% Similarity=0.308 Sum_probs=40.2
Q ss_pred CeEEEEecccCceeEEEECCe--eeEEEEECCCCCEEEEeeCC-----CcEEEEcCCCCCcceEEEEeccccCcEEEEEE
Q psy2107 296 HTLKIWDAELGGMKSEIVGNK--SFFDVHYSPLSKLVITASAD-----KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRW 368 (391)
Q Consensus 296 g~i~iwd~~~~~~~~~~~~~~--~i~~~~~~p~~~~l~~g~~d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~ 368 (391)
..+.+||+.+.+-...-.... .-.+++.. ++++++.|+.+ ..+.+||+.+..-. .+..+.........+.+
T Consensus 175 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~ 252 (318)
T 2woz_A 175 NRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNKWE-VMTEFPQERSSISLVSL 252 (318)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCCEE-ECCCCSSCCBSCEEEEE
T ss_pred ceEEEEcCCCCEEEECCCCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCeEE-ECCCCCCcccceEEEEE
Confidence 358899988765332211111 11122222 46777777543 35778998765422 11122222222223333
Q ss_pred CCCCCCEEEEeeCC
Q psy2107 369 SPIDPQLFVSASFD 382 (391)
Q Consensus 369 ~~~~~~~l~s~~~d 382 (391)
++.+++.||.+
T Consensus 253 ---~~~i~v~GG~~ 263 (318)
T 2woz_A 253 ---AGSLYAIGGFA 263 (318)
T ss_dssp ---TTEEEEECCBC
T ss_pred ---CCEEEEECCee
Confidence 45677777764
No 323
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.99 E-value=0.71 Score=40.25 Aligned_cols=110 Identities=10% Similarity=0.086 Sum_probs=75.3
Q ss_pred cccEEEeccCCeEEEEECCCeEEEEecccCc------------eeEEEEC-------CeeeEEEEECCC---CCEEEEee
Q psy2107 277 AISAVQWTAVDEIITSSWDHTLKIWDAELGG------------MKSEIVG-------NKSFFDVHYSPL---SKLVITAS 334 (391)
Q Consensus 277 ~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~------------~~~~~~~-------~~~i~~~~~~p~---~~~l~~g~ 334 (391)
.|..+..+|+|.+++-..+..|.|-.+..+. ..+.+.. ..+|..+.|+|- +..|++-.
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLt 146 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLK 146 (452)
T ss_dssp TTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEE
T ss_pred ceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEe
Confidence 5778999998988888888899999887322 1223332 347999999996 45888889
Q ss_pred CCCcEEEEcCCCCCcceE-E------EEeccccCcEEEEEECCCCCCEEEEe--eCCCcEEE
Q psy2107 335 ADKQIRLYDPKVKEGAIV-K------STFSSHKEWVQSVRWSPIDPQLFVSA--SFDNSVKL 387 (391)
Q Consensus 335 ~dg~i~iwd~~~~~~~~~-~------~~~~~h~~~v~~~~~~~~~~~~l~s~--~~dg~v~i 387 (391)
.|+.|++||+......+. . .....+...|.+++|.+ ++..|... +..|.|+-
T Consensus 147 sD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~-~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 147 EDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSK-DGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp TTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECT-TSSCEEEEECTTSCEEEE
T ss_pred cCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcC-CCcEEEEEecCCCCCEEE
Confidence 999999999976322111 1 01112235789999998 66555553 47777753
No 324
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.76 E-value=0.53 Score=36.97 Aligned_cols=149 Identities=9% Similarity=0.042 Sum_probs=80.8
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec--CccCcccEEE
Q psy2107 205 RGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK--GHKEAISAVQ 282 (391)
Q Consensus 205 ~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~ 282 (391)
..++.++|+|++.+.++ .+|.+.-.+..+..... + ...-..+- +.. .-.++.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~------------------W-----~~s~t~IG~~Gw~-~F~a~~ 94 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDN------------------W-----MGRAKKIGNGGWN-QFQFLF 94 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCC------------------H-----HHHCEEEECSCGG-GCSEEE
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCccc------------------c-----cccccEecccccc-cceEEE
Confidence 47889999999986666 66765554442211100 0 00001110 111 147888
Q ss_pred eccCCeEEEEECCCeEEEEecccCcee-----EEEECC---eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcc----
Q psy2107 283 WTAVDEIITSSWDHTLKIWDAELGGMK-----SEIVGN---KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGA---- 350 (391)
Q Consensus 283 ~~~~~~l~s~~~dg~i~iwd~~~~~~~-----~~~~~~---~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~---- 350 (391)
|.+++.|+++ .||.|.-++-.+.... .+.-+. ..+..+.+.|+|.+.++. |+.++-....+....
T Consensus 95 fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~ 171 (236)
T 1tl2_A 95 FDPNGYLYAV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLA 171 (236)
T ss_dssp ECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHH
T ss_pred ECCCCCEEEe-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCccccc
Confidence 8899998888 6799987775332111 111111 367899999999988877 777654433321110
Q ss_pred eEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcE
Q psy2107 351 IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSV 385 (391)
Q Consensus 351 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v 385 (391)
.....-...-..-+.+.|.+ ++.+.+.. +|.+
T Consensus 172 ~~~~~g~~g~~~yr~l~f~~-~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 172 RATKIGQGGWDTFKFLFFSS-VGTLFGVQ--GGKF 203 (236)
T ss_dssp HCEEEESSSGGGEEEEEECT-TSCEEEEE--TTEE
T ss_pred ccceeccCCcceEEEEEECC-CCcEEEEe--CCeE
Confidence 00111112333456677988 65544433 6644
No 325
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.68 E-value=0.84 Score=38.71 Aligned_cols=109 Identities=11% Similarity=0.015 Sum_probs=61.9
Q ss_pred CCEEEEEECCCeEEEEcC-CCceEEeccCC-CCCeeEEEEEecCC-CCeEEEEE-eCCCcEEEEeecCCCCceeEEEEEe
Q psy2107 126 NDWILTGCYDHSVHIWTR-RGEHKLNIPGH-GGPVKGVAWLYNDG-KDAAFISV-STDQTAMIWEWKVESNSIECIHVCR 201 (391)
Q Consensus 126 ~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~-~~~v~~l~~~~~~~-~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~ 201 (391)
++.++.++.||.|.-.|. +++...++... ..++....- +..+ ++..++.. +.||.|..++.. .+ .....+.
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~-~~~~~~~~~~vv~p~~dG~l~a~~~~--~G--~~~~~~~ 84 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQE-PSRLETYETLIIEPFGDGNIYYFNAH--QG--LQKLPLS 84 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCC-SCTTTSSEEEEECCSTTTEEEEEETT--TE--EEEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecC-CccccCCcEEEEEECCCCEEEEEECC--CC--cEEeeec
Confidence 558899999999999998 67777776543 122222110 1111 22334333 579999888843 22 2222222
Q ss_pred c----CCCCeEE---EEE-c----CCCCEEEEEeCCCcEEEEECCCCCCC
Q psy2107 202 G----HERGLET---VTV-S----ESRQQFATGGWDCLLKIWSADISKER 239 (391)
Q Consensus 202 ~----~~~~v~~---l~~-~----~~~~~l~sg~~dg~i~iwd~~~~~~~ 239 (391)
. ...++.. ... . ..+..+++|+.+|.+...|.++++..
T Consensus 85 ~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 85 IRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEII 134 (339)
T ss_dssp HHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred cccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEE
Confidence 1 1112221 000 0 03457889999999999999887753
No 326
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.63 E-value=0.66 Score=39.71 Aligned_cols=54 Identities=9% Similarity=0.158 Sum_probs=29.6
Q ss_pred EEEecCCEEEEEEC-C---------CeEEEEcCCCceEEeccCCC-C---CeeEEEEEecCCCCeEEEEEeCC
Q psy2107 121 AIDFHNDWILTGCY-D---------HSVHIWTRRGEHKLNIPGHG-G---PVKGVAWLYNDGKDAAFISVSTD 179 (391)
Q Consensus 121 ~~~~~~~~l~t~~~-d---------g~i~iwd~~~~~~~~~~~~~-~---~v~~l~~~~~~~~~~~l~s~~~d 179 (391)
++.+.+.+++.|+. + ..+.+||.....-..+.... . ...++.+ ++.+++.|+.+
T Consensus 61 ~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~-----~~~iyv~GG~~ 128 (357)
T 2uvk_A 61 SAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVH-----NGKAYVTGGVN 128 (357)
T ss_dssp EEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEE-----TTEEEEEECCC
T ss_pred EEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEE-----CCEEEEEeCcC
Confidence 33445667777765 2 46888998654433332211 1 1222333 56778888765
No 327
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.53 E-value=0.71 Score=46.84 Aligned_cols=177 Identities=12% Similarity=0.132 Sum_probs=102.1
Q ss_pred CCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC----CCCeEE
Q psy2107 134 YDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH----ERGLET 209 (391)
Q Consensus 134 ~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~----~~~v~~ 209 (391)
...++.|+|+..+....-.....+|.-=.|. +++ .|+-.+ +..|..|++.. ...++..+..| ...|..
T Consensus 84 ag~~lQiFnl~~k~klks~~~~e~VvfWkWi--s~~--~l~lVT-~~aVyHW~~~~---~s~P~k~fdR~~~L~~~QIin 155 (1630)
T 1xi4_A 84 AGKTLQIFNIEMKSKMKAHTMTDDVTFWKWI--SLN--TVALVT-DNAVYHWSMEG---ESQPVKMFDRHSSLAGCQIIN 155 (1630)
T ss_pred cCCeEEEeehHHhhhhcccccCCCceEEEec--CCC--eeEEEc-CCeEEEeccCC---CCccHHHHhcchhcccCeeEE
Confidence 3679999999544333322345567777775 223 333333 56799999642 23444444444 346777
Q ss_pred EEEcCCCCEEEEEe-------CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEE
Q psy2107 210 VTVSESRQQFATGG-------WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQ 282 (391)
Q Consensus 210 l~~~~~~~~l~sg~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 282 (391)
-..+++.++++..| -.|.+.+|..+.. ..+.+.||......+.
T Consensus 156 Y~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~------------------------------~sQ~iegha~~F~~~~ 205 (1630)
T 1xi4_A 156 YRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK------------------------------VSQPIEGHAASFAQFK 205 (1630)
T ss_pred eeeCCCCCeEEEEeeccCCCcccceeeeeecccc------------------------------cchhhhHhHhhhheec
Confidence 77788888776433 3477888887642 2334455555444443
Q ss_pred ec----cCCeEEEEE---CCCeEEEEecccC---ceeEE-------EEC---CeeeEEEEECCCCCEEEEeeCCCcEEEE
Q psy2107 283 WT----AVDEIITSS---WDHTLKIWDAELG---GMKSE-------IVG---NKSFFDVHYSPLSKLVITASADKQIRLY 342 (391)
Q Consensus 283 ~~----~~~~l~s~~---~dg~i~iwd~~~~---~~~~~-------~~~---~~~i~~~~~~p~~~~l~~g~~dg~i~iw 342 (391)
.. +...++.+. ..+.++|-++... ..... +.. ..-..++..++....+..-+.-|.|++|
T Consensus 206 ~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~ 285 (1630)
T 1xi4_A 206 MEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLY 285 (1630)
T ss_pred cCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEE
Confidence 33 111222221 1368888887543 11111 000 1123467778777778888889999999
Q ss_pred cCCCCC
Q psy2107 343 DPKVKE 348 (391)
Q Consensus 343 d~~~~~ 348 (391)
|+.++.
T Consensus 286 d~~t~~ 291 (1630)
T 1xi4_A 286 DLETGT 291 (1630)
T ss_pred ecccch
Confidence 999876
No 328
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.49 E-value=0.15 Score=40.08 Aligned_cols=105 Identities=10% Similarity=0.051 Sum_probs=64.4
Q ss_pred CcccEEEeccCCeEEEEECCCeEEEEecccCcee------EEEE--CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC
Q psy2107 276 EAISAVQWTAVDEIITSSWDHTLKIWDAELGGMK------SEIV--GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK 347 (391)
Q Consensus 276 ~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~------~~~~--~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~ 347 (391)
..+..++|+|++.|++. .+|.+.-.+..+.... ..+- .-.....+.|.|+|.+.++ .||.|+-++..+.
T Consensus 41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred ccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 36779999999998888 7888777666442211 1111 1112478899999998887 4699988886442
Q ss_pred CcceE----EEEeccccCcEEEEEECCCCCCEEEEeeCCCcEE
Q psy2107 348 EGAIV----KSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 386 (391)
Q Consensus 348 ~~~~~----~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~ 386 (391)
..... ...-..-=..+..|.+.| ++.+.+. . |+.++
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav-~-dg~ly 157 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAV-H-GQQFY 157 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEE-E-TTEEE
T ss_pred CCCceeccccEeccCCCCceEEEEECC-CceEEEE-e-CCcEE
Confidence 21110 000111114579999999 6654444 4 77753
No 329
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.45 E-value=0.72 Score=43.73 Aligned_cols=191 Identities=13% Similarity=0.093 Sum_probs=93.5
Q ss_pred CCeEEEEEeCC----CcEEEEeecCCCCceeEEE-E-----EecCCCCeEEEEEcCCCCEEEEEeCCC------cEEEEE
Q psy2107 169 KDAAFISVSTD----QTAMIWEWKVESNSIECIH-V-----CRGHERGLETVTVSESRQQFATGGWDC------LLKIWS 232 (391)
Q Consensus 169 ~~~~l~s~~~d----g~v~iwd~~~~~~~~~~~~-~-----~~~~~~~v~~l~~~~~~~~l~sg~~dg------~i~iwd 232 (391)
++.+++.|+.+ ..+.+||.. ...+..+. . .......-.++.+..++++++.||.++ .+.+||
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~--~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIH--YDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEEC--SSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred CCEEEEECCCCCCCcCcEEEEECC--CCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 45567777653 356777744 45555544 2 111122223333322677777877543 466777
Q ss_pred CCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCC--eEEEEecccCceeE
Q psy2107 233 ADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDH--TLKIWDAELGGMKS 310 (391)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~ 310 (391)
..+.+-. .+..+......-.++.+..+..++.|+.++ .+.+||..+..-..
T Consensus 475 ~~t~~W~---------------------------~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~ 527 (695)
T 2zwa_A 475 MKTREWS---------------------------MIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKD 527 (695)
T ss_dssp TTTTEEE---------------------------ECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEE
T ss_pred CCCCcEE---------------------------ECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEE
Confidence 7652211 000111111111222223445566676544 68999988765332
Q ss_pred EEE---C--C-eeeEEEEECCC-CCEEEEeeC--C-----CcEEEEcCCCCCc-----ceEEEEec-cccCcEEEEEECC
Q psy2107 311 EIV---G--N-KSFFDVHYSPL-SKLVITASA--D-----KQIRLYDPKVKEG-----AIVKSTFS-SHKEWVQSVRWSP 370 (391)
Q Consensus 311 ~~~---~--~-~~i~~~~~~p~-~~~l~~g~~--d-----g~i~iwd~~~~~~-----~~~~~~~~-~h~~~v~~~~~~~ 370 (391)
.-. . . ....++.+..+ +++++.|+. + +.+.+||+.+... ...+.... ........+.+.
T Consensus 528 ~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~- 606 (695)
T 2zwa_A 528 VTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYIT- 606 (695)
T ss_dssp CCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEE-
T ss_pred ccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeC-
Confidence 211 0 1 12233455554 667777765 2 4588999877651 11222211 111222333332
Q ss_pred CCCCEEEEeeCC--------CcEEEEec
Q psy2107 371 IDPQLFVSASFD--------NSVKLWDL 390 (391)
Q Consensus 371 ~~~~~l~s~~~d--------g~v~iwdl 390 (391)
++.+++.||.+ ..|.+||+
T Consensus 607 -~~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 607 -PRKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp -TTEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred -CCEEEEECCccCCCCCCCCCeEEEEEC
Confidence 25678888753 45777775
No 330
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.41 E-value=0.34 Score=41.64 Aligned_cols=103 Identities=10% Similarity=0.104 Sum_probs=62.3
Q ss_pred CcccEEEeccCCeEEEEECCCeEEEEecccCc-eeEEEE----CCeeeEEEEECCC---CCEEEEeeC----C----CcE
Q psy2107 276 EAISAVQWTAVDEIITSSWDHTLKIWDAELGG-MKSEIV----GNKSFFDVHYSPL---SKLVITASA----D----KQI 339 (391)
Q Consensus 276 ~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~----~~~~i~~~~~~p~---~~~l~~g~~----d----g~i 339 (391)
.....++|.+++.++.+..+|.|+++| .+++ .+..+. .......++++|+ +..|.++.. + +.|
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 345789999889999998899999997 4454 111111 2246789999997 444444332 2 567
Q ss_pred EEEcCCCCC-----cceEEEEec-cccCcEEEEEECCCCCCEEEEee
Q psy2107 340 RLYDPKVKE-----GAIVKSTFS-SHKEWVQSVRWSPIDPQLFVSAS 380 (391)
Q Consensus 340 ~iwd~~~~~-----~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~ 380 (391)
..|+..... ...+...+. ........|+|.| ++.++++.+
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G 153 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTG 153 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECC
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEEC
Confidence 777765431 111222222 1112346799999 556777654
No 331
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.40 E-value=2 Score=41.16 Aligned_cols=220 Identities=10% Similarity=0.094 Sum_probs=121.0
Q ss_pred CCcEEEEEec-CCEEEEEECCCeEEEEcCCCceEEecc----CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC
Q psy2107 116 DDWVSAIDFH-NDWILTGCYDHSVHIWTRRGEHKLNIP----GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE 190 (391)
Q Consensus 116 ~~~V~~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~----~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 190 (391)
...|+||.-+ ..++-.|+.+| +..||-.. ...+. .....|.++.. +.++ .|..|+.+| +..||..
T Consensus 21 ~n~V~~I~qD~~G~lWigT~~G-L~ryDG~~--~~~~~~~~~~~~~~i~~i~~---d~~g-~lWigT~~G-l~~yd~~-- 90 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIWIGSNKG-LFSYDGYS--TQQHFTYGENNNTRIYCGVI---IDNT-YLYMGTDNG-ILVYNYR-- 90 (758)
T ss_dssp CCCEEEEEECTTSCEEEEESSC-EEEECSSC--EEECSCTTSTTSSCEEEEEE---ETTT-EEEEEETTE-EEEEETT--
T ss_pred cceEEEEEECCCCCEEEEECCC-ccccCCCc--eEEEEccCCCCCceEEEEEE---cCCC-cEEEEeCCC-eEEEeCC--
Confidence 4579999988 34666777887 55566322 11111 12346777765 4444 566666655 7788843
Q ss_pred CCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee
Q psy2107 191 SNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT 270 (391)
Q Consensus 191 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (391)
...... ........|.++.. .++ .|..|+.+ -|..+|..+.+. ..
T Consensus 91 ~~~f~~--~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~------------------------------~~ 135 (758)
T 3ott_A 91 ADRYEQ--PETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKL------------------------------TS 135 (758)
T ss_dssp TTEECC--CSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCE------------------------------EE
T ss_pred CCEEEC--cccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeE------------------------------EE
Confidence 222111 11111235777654 344 46666666 577888754221 11
Q ss_pred e-----cCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECC-------eeeEEEEECCCCCEEEEeeCCCc
Q psy2107 271 L-----KGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN-------KSFFDVHYSPLSKLVITASADKQ 338 (391)
Q Consensus 271 ~-----~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------~~i~~~~~~p~~~~l~~g~~dg~ 338 (391)
+ ......|.++....++.+..++.. -+..+|..+++.. .+... ..|.++...+++..|..|+. +.
T Consensus 136 ~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~G 212 (758)
T 3ott_A 136 FDTRRNGLPNNTIYSIIRTKDNQIYVGTYN-GLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GY 212 (758)
T ss_dssp ECHHHHCCSCSCEEEEEECTTCCEEEEETT-EEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EE
T ss_pred eccCCCCcCCCeEEEEEEcCCCCEEEEeCC-CHhhCccCCCceE-EecCCCccccccceeEEEEEECCCCEEEEEEC-CC
Confidence 1 011345777777767777777765 4777887665432 22211 23778887777775555654 45
Q ss_pred EEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107 339 IRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 339 i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 389 (391)
+..+|..+..-. ....+ ....|.++.... ++.+. .|+.+ -+.+++
T Consensus 213 l~~~~~~~~~~~-~~~~l--~~~~i~~i~~d~-~g~lW-igT~~-Gl~~~~ 257 (758)
T 3ott_A 213 LFQYFPSTGQIK-QTEAF--HNNSIKSLALDG-NGDLL-AGTDN-GLYVYH 257 (758)
T ss_dssp EEEEETTTTEEE-EEEEE--EEEEEEEEEECT-TCCEE-EEETT-EEEEEC
T ss_pred CeEEcCCCCeEE-eccCC--CCCeEEEEEEcC-CCCEE-EEeCC-ceeEEe
Confidence 888887654311 11111 234588888877 44433 34444 455555
No 332
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.34 E-value=0.73 Score=38.71 Aligned_cols=105 Identities=9% Similarity=0.095 Sum_probs=52.1
Q ss_pred EecCCEEEEEEC----CC-------eEEEEcCCCceEEeccCCC---CCeeEEEEEecCCCCeEEEEEeCC-------Cc
Q psy2107 123 DFHNDWILTGCY----DH-------SVHIWTRRGEHKLNIPGHG---GPVKGVAWLYNDGKDAAFISVSTD-------QT 181 (391)
Q Consensus 123 ~~~~~~l~t~~~----dg-------~i~iwd~~~~~~~~~~~~~---~~v~~l~~~~~~~~~~~l~s~~~d-------g~ 181 (391)
...+.+++.|+. ++ .+.+||.....-..+.... .....+.+ ++.+++.|+.+ ..
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~ 128 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV-----DDKIYVVAGKDLQTEASLDS 128 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE-----TTEEEEEEEEBTTTCCEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE-----CCEEEEEcCccCCCCcccce
Confidence 344677777773 12 2777887554444332211 11222222 56677777754 23
Q ss_pred EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC------CCcEEEEECCCC
Q psy2107 182 AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW------DCLLKIWSADIS 236 (391)
Q Consensus 182 v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~------dg~i~iwd~~~~ 236 (391)
+.+|| ..+..+..+..+......-.++. .++++++.|+. -..+.+||+.+.
T Consensus 129 ~~~yd--~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 129 VLCYD--PVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp EEEEE--TTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTT
T ss_pred EEEEe--CCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCC
Confidence 55666 44555555433222111112222 35666777764 235788888653
No 333
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.31 E-value=0.79 Score=39.31 Aligned_cols=30 Identities=10% Similarity=0.032 Sum_probs=22.7
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy2107 205 RGLETVTVSESRQQFATGGWDCLLKIWSAD 234 (391)
Q Consensus 205 ~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~ 234 (391)
.....|+|.|+++.|+++...|.|++++.+
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~ 47 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG 47 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC
Confidence 356799999999834455677999998853
No 334
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.20 E-value=1.3 Score=37.90 Aligned_cols=71 Identities=7% Similarity=-0.038 Sum_probs=43.4
Q ss_pred CCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe---cCCCCeEEEEEcCC---CCEEEEEeC-C---
Q psy2107 156 GPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR---GHERGLETVTVSES---RQQFATGGW-D--- 225 (391)
Q Consensus 156 ~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~---~~~~~v~~l~~~~~---~~~l~sg~~-d--- 225 (391)
..-..++| .+++.++++ ..+|.|.+++ . .....+..+. ........|+++|+ +..|..+.. .
T Consensus 31 ~~P~~ia~---~pdG~l~V~-e~~g~I~~i~-~---g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~ 102 (352)
T 2ism_A 31 EVPWALAF---LPDGGMLIA-ERPGRIRLFR-E---GRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGG 102 (352)
T ss_dssp SCEEEEEE---CTTSCEEEE-ETTTEEEEEE-T---TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTS
T ss_pred CCceEEEE---cCCCeEEEE-eCCCeEEEEE-C---CCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCC
Confidence 34568999 677875554 5669888887 2 2333333222 12356889999998 444544433 2
Q ss_pred --CcEEEEECC
Q psy2107 226 --CLLKIWSAD 234 (391)
Q Consensus 226 --g~i~iwd~~ 234 (391)
+.|..++..
T Consensus 103 ~~~~v~r~~~~ 113 (352)
T 2ism_A 103 LRNQVVRLRHL 113 (352)
T ss_dssp SEEEEEEEEEC
T ss_pred CccEEEEEEeC
Confidence 567777765
No 335
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.97 E-value=1.9 Score=38.45 Aligned_cols=104 Identities=7% Similarity=-0.022 Sum_probs=58.8
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec------CccCc
Q psy2107 204 ERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK------GHKEA 277 (391)
Q Consensus 204 ~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 277 (391)
-.....|+|.|+|+++++-...+.|++++..++.. ..+..+. .....
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~---------------------------~~~~~~~~~~~~~~g~~G 78 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSV---------------------------KTVFQVPEIVNDADGQNG 78 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE---------------------------EEEEECTTCCCCTTSSCS
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcE---------------------------eEEecCCccccccCCCCc
Confidence 34567999999998666644334688887543221 0111111 12345
Q ss_pred ccEEEecc----CCeEEEEEC-------------CCeEEEEecccC-------ceeEE-EEC--CeeeEEEEECCCCCEE
Q psy2107 278 ISAVQWTA----VDEIITSSW-------------DHTLKIWDAELG-------GMKSE-IVG--NKSFFDVHYSPLSKLV 330 (391)
Q Consensus 278 v~~~~~~~----~~~l~s~~~-------------dg~i~iwd~~~~-------~~~~~-~~~--~~~i~~~~~~p~~~~l 330 (391)
...|+|+| ++.|+.+.. ...|.-|++..+ +.+.. +.. .+....++|.|+|.+.
T Consensus 79 llgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Ly 158 (454)
T 1cru_A 79 LLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIY 158 (454)
T ss_dssp EEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEE
T ss_pred eeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEE
Confidence 66899997 566665543 235555655322 11111 221 2346889999999876
Q ss_pred EEee
Q psy2107 331 ITAS 334 (391)
Q Consensus 331 ~~g~ 334 (391)
++.+
T Consensus 159 v~~G 162 (454)
T 1cru_A 159 YTIG 162 (454)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 6643
No 336
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=94.97 E-value=1.3 Score=36.56 Aligned_cols=216 Identities=11% Similarity=0.086 Sum_probs=108.7
Q ss_pred cEEEEEecCCEEEEEECCCeEEEEcCC--CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCcee
Q psy2107 118 WVSAIDFHNDWILTGCYDHSVHIWTRR--GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE 195 (391)
Q Consensus 118 ~V~~~~~~~~~l~t~~~dg~i~iwd~~--~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 195 (391)
.|..++......+.-. ||.|..|-.. ++.-... .....|..++. .. ...++. . ||.|..|-.+....-..
T Consensus 25 ~i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~p~-~~~~~i~~ia~---G~-~hs~~l-~-~G~v~~wG~n~~Gqlg~ 96 (282)
T 3qhy_B 25 GVDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMPA-ATQSGVDAIAA---GN-YHSLAL-K-DGEVIAWGGNEDGQTTV 96 (282)
T ss_dssp SCCEEEECSSEEEEEE-TTEEEEEECCSSSTTSCCG-GGGSCCCEEEE---CS-SEEEEE-E-TTEEEEEECCTTSTTCC
T ss_pred CCcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCCCCc-cCCCCEEEEEe---CC-CEEEEE-E-CCEEEEeeCCCCCCCCC
Confidence 5777777655444446 9999999652 2211111 12335777776 32 333443 4 99999997432211111
Q ss_pred EEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCcc
Q psy2107 196 CIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHK 275 (391)
Q Consensus 196 ~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (391)
+ ..-...|..++...+. .+.-. ||.|..|-.....+... +. ...
T Consensus 97 P----~~~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~gqlg~-------------------------~~----~~~ 140 (282)
T 3qhy_B 97 P----AEARSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDGQTTV-------------------------PA----EAQ 140 (282)
T ss_dssp C----GGGSSSEEEEEEETTE--EEEEE-TTEEEEEECCTTSTTSC-------------------------CG----GGG
T ss_pred C----cccCCCeEEEECcCCE--EEEEe-CCeEEEecCCCCCcCCC-------------------------Cc----cCC
Confidence 1 0113467777776543 33444 89999997654222110 00 012
Q ss_pred CcccEEEeccCCeEEEEECCCeEEEEecccC-ceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEE
Q psy2107 276 EAISAVQWTAVDEIITSSWDHTLKIWDAELG-GMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKS 354 (391)
Q Consensus 276 ~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 354 (391)
..|..++-.....++. . ||.|..|-.... ++-........|..++..... .++. .||.|+.|-........
T Consensus 141 ~~i~~i~~G~~~~~~l-~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg--- 212 (282)
T 3qhy_B 141 SGVTALDGGVYTALAV-K-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTT--- 212 (282)
T ss_dssp SSEEEEEECSSEEEEE-E-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTC---
T ss_pred CCeEEEEcccCEEEEE-E-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCC---
Confidence 2355554433222332 3 788888865432 211111112356666655332 3333 48999999654321110
Q ss_pred EeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107 355 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 355 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 389 (391)
.-......|..++... . ..+.-. ||.|..|-
T Consensus 213 ~p~~~~~~v~~i~~G~-~--h~~al~-~g~v~~wG 243 (282)
T 3qhy_B 213 VPTEALSGVSAIASGE-W--YSLALK-NGKVIAWG 243 (282)
T ss_dssp CCGGGGSSCCEEEECS-S--CEEEEE-TTEEEEES
T ss_pred CCcccCCCceEEEcCC-C--EEEEEE-CCEEEEec
Confidence 0011223577777644 2 233333 88998883
No 337
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.00 E-value=3.1 Score=36.98 Aligned_cols=62 Identities=10% Similarity=0.160 Sum_probs=36.4
Q ss_pred CCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEec------CCCCeEEEEEcCC---CCEEEEE
Q psy2107 156 GPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRG------HERGLETVTVSES---RQQFATG 222 (391)
Q Consensus 156 ~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~------~~~~v~~l~~~~~---~~~l~sg 222 (391)
...+.++| .+++.++++-...+.|++++. .......+..+.. .......|+|+|+ +..|...
T Consensus 27 ~~P~~~a~---~pdG~l~V~e~~gg~I~~~~~--~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 27 NKPHALLW---GPDNQIWLTERATGKILRVNP--ESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp SSEEEEEE---CTTSCEEEEETTTCEEEEECT--TTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred CCceEEEE---cCCCcEEEEEcCCCEEEEEEC--CCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 35678999 667887766544456877762 2233333333321 2456779999995 4444443
No 338
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.92 E-value=1.1 Score=42.52 Aligned_cols=111 Identities=12% Similarity=0.078 Sum_probs=59.8
Q ss_pred EEEe--cCCEEEEEECC------CeEEEEcCCCceEEeccCCCCC--eeEEEEEecCCCCeEEEEEeCCC--cEEEEeec
Q psy2107 121 AIDF--HNDWILTGCYD------HSVHIWTRRGEHKLNIPGHGGP--VKGVAWLYNDGKDAAFISVSTDQ--TAMIWEWK 188 (391)
Q Consensus 121 ~~~~--~~~~l~t~~~d------g~i~iwd~~~~~~~~~~~~~~~--v~~l~~~~~~~~~~~l~s~~~dg--~v~iwd~~ 188 (391)
++.+ .+.+++.|+.+ ..+.+||.....-..+.....+ -.+++. -.++.+++.|+.++ .+.+||
T Consensus 445 ~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~---~~~~~iyv~GG~~~~~~v~~yd-- 519 (695)
T 2zwa_A 445 FTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACS---LPDGNVLILGGVTEGPAMLLYN-- 519 (695)
T ss_dssp EEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEE---CTTSCEEEECCBCSSCSEEEEE--
T ss_pred EEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEE---EcCCEEEEECCCCCCCCEEEEE--
Confidence 4455 66677777754 3578888855433333211111 112222 12567777777654 577777
Q ss_pred CCCCceeEEEE---EecCCCCeEEEEEcCC-CCEEEEEeC--C-----CcEEEEECCCC
Q psy2107 189 VESNSIECIHV---CRGHERGLETVTVSES-RQQFATGGW--D-----CLLKIWSADIS 236 (391)
Q Consensus 189 ~~~~~~~~~~~---~~~~~~~v~~l~~~~~-~~~l~sg~~--d-----g~i~iwd~~~~ 236 (391)
..+..+..+.. .........++.+..+ +++++.|+. + +.+.+||+.+.
T Consensus 520 ~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 520 VTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred CCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 44555554432 1112222334555655 667777775 2 35788888763
No 339
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=93.86 E-value=2.6 Score=35.46 Aligned_cols=103 Identities=10% Similarity=0.054 Sum_probs=63.7
Q ss_pred CCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC---CCcEEEEeecCC-CCc----eeEEEEEec---C
Q psy2107 135 DHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST---DQTAMIWEWKVE-SNS----IECIHVCRG---H 203 (391)
Q Consensus 135 dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~-~~~----~~~~~~~~~---~ 203 (391)
.|.+.+|..+.+....+.+|.+....+...-+.....+++.+.. .+.+.+-++... .+. .+.+..+.. -
T Consensus 179 ~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~ 258 (365)
T 2xzh_A 179 VGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQ 258 (365)
T ss_dssp EEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCT
T ss_pred ceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCcccc
Confidence 37899999998888888888655444433111111223443333 257888886433 111 112222221 2
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy2107 204 ERGLETVTVSESRQQFATGGWDCLLKIWSADISK 237 (391)
Q Consensus 204 ~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~ 237 (391)
.+--.++..++.-..+..-+.-|.|++||++++.
T Consensus 259 ~DFPVamqvs~kygviyviTK~G~ihlyDleTgt 292 (365)
T 2xzh_A 259 NDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 292 (365)
T ss_dssp TCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred CCceEEEEecccCCEEEEEeCCcEEEEEEcccCc
Confidence 3455678888888889999999999999998844
No 340
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.76 E-value=2.8 Score=35.65 Aligned_cols=153 Identities=10% Similarity=0.043 Sum_probs=83.9
Q ss_pred EEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee----ec
Q psy2107 197 IHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT----LK 272 (391)
Q Consensus 197 ~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 272 (391)
+..+...-.....|+|.|+|+++++--..|.|++++...++. ..+.. ..
T Consensus 24 ~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~---------------------------~~v~~~~~v~~ 76 (347)
T 3das_A 24 LRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRK---------------------------TELGEVPGVSP 76 (347)
T ss_dssp EEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE---------------------------EEEEECTTCCC
T ss_pred eEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcE---------------------------eeecccCceee
Confidence 334444455678999999999766655589999887643221 01111 11
Q ss_pred CccCcccEEEeccC----CeEEEE---ECCCeEEEEecccC----------ceeE-EEE--CCeeeEEEEECCCCCEEEE
Q psy2107 273 GHKEAISAVQWTAV----DEIITS---SWDHTLKIWDAELG----------GMKS-EIV--GNKSFFDVHYSPLSKLVIT 332 (391)
Q Consensus 273 ~~~~~v~~~~~~~~----~~l~s~---~~dg~i~iwd~~~~----------~~~~-~~~--~~~~i~~~~~~p~~~~l~~ 332 (391)
........|+++|+ +.|+.. ..++.|.-|.+..+ +.+. .+. ..+....++|.|+|.+.++
T Consensus 77 ~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt 156 (347)
T 3das_A 77 SGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAG 156 (347)
T ss_dssp BTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEE
T ss_pred cCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEE
Confidence 23455678999863 666554 23455666655431 1111 122 1224567999999987776
Q ss_pred eeC-------------CCcEEEEcCCCCC---cc--eEEEEeccccCcEEEEEECCCCCCEEEE
Q psy2107 333 ASA-------------DKQIRLYDPKVKE---GA--IVKSTFSSHKEWVQSVRWSPIDPQLFVS 378 (391)
Q Consensus 333 g~~-------------dg~i~iwd~~~~~---~~--~~~~~~~~h~~~v~~~~~~~~~~~~l~s 378 (391)
.+. .|.|.-++....- .+ .....-.+|.. ...++|+| ++.++++
T Consensus 157 ~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RN-p~Gla~dp-~G~L~~~ 218 (347)
T 3das_A 157 TGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRN-VQGLAWDD-KQRLFAS 218 (347)
T ss_dssp CBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSB-CCEEEECT-TCCEEEE
T ss_pred ECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCC-cceEEECC-CCCEEEE
Confidence 432 3555555543210 00 01112235654 56899999 4554443
No 341
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=92.04 E-value=5.9 Score=34.80 Aligned_cols=103 Identities=10% Similarity=0.054 Sum_probs=65.3
Q ss_pred CCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC---CcEEEEeecCC-CCc----eeEEEEEec---C
Q psy2107 135 DHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD---QTAMIWEWKVE-SNS----IECIHVCRG---H 203 (391)
Q Consensus 135 dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~-~~~----~~~~~~~~~---~ 203 (391)
.|.+.+|..+.+....+.+|.+....+...-+.....+++.+... +.+.+-++... .+. .+.+..+.. -
T Consensus 178 ~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~ 257 (494)
T 1bpo_A 178 VGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQ 257 (494)
T ss_dssp EEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTST
T ss_pred cceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccc
Confidence 478999999888888888987655554441111112344444443 78888886432 111 111111111 1
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy2107 204 ERGLETVTVSESRQQFATGGWDCLLKIWSADISK 237 (391)
Q Consensus 204 ~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~ 237 (391)
.+--.++..++.-..+..-+.-|.|.+||++++.
T Consensus 258 ~DFPvamqvs~kygviyviTK~G~i~lyDleTgt 291 (494)
T 1bpo_A 258 NDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 291 (494)
T ss_dssp TCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred cCceeEEEecccCCEEEEEecCceEEEEecccce
Confidence 3445678888888889999999999999998844
No 342
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.95 E-value=8.9 Score=36.65 Aligned_cols=256 Identities=11% Similarity=0.041 Sum_probs=127.5
Q ss_pred CcEEEEEec-CCEEEEEECCCeEEEEcCCCceEEeccC--C----CCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC
Q psy2107 117 DWVSAIDFH-NDWILTGCYDHSVHIWTRRGEHKLNIPG--H----GGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV 189 (391)
Q Consensus 117 ~~V~~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~--~----~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 189 (391)
..|.++..+ ...|..|+.+| |..++........+.. . ...|.++.. +.++..|..|+. +.+..++.
T Consensus 146 ~~i~~i~~d~~g~lWigt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~---d~~~~~lWigt~-~Gl~~~~~-- 218 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYVGTYNG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLE---DTTRQCVWIGTE-GYLFQYFP-- 218 (758)
T ss_dssp SCEEEEEECTTCCEEEEETTE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEE---ETTTTEEEEEEE-EEEEEEET--
T ss_pred CeEEEEEEcCCCCEEEEeCCC-HhhCccCCCceEEecCCCccccccceeEEEEE---ECCCCEEEEEEC-CCCeEEcC--
Confidence 468888776 33444566554 6778875544433221 1 224777766 444554555553 45777773
Q ss_pred CCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCC----CCCC---Ccc-cccccccccc
Q psy2107 190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSE----NGDE---GTT-SKKRKKEYSS 261 (391)
Q Consensus 190 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~----~~~~---~~~-~~~~~~~~~~ 261 (391)
..........+. ...|.++....++.+ ..|+.+ -+.+++..+.....-... .... ... ...+....|.
T Consensus 219 ~~~~~~~~~~l~--~~~i~~i~~d~~g~l-WigT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi 294 (758)
T 3ott_A 219 STGQIKQTEAFH--NNSIKSLALDGNGDL-LAGTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWL 294 (758)
T ss_dssp TTTEEEEEEEEE--EEEEEEEEECTTCCE-EEEETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEE
T ss_pred CCCeEEeccCCC--CCeEEEEEEcCCCCE-EEEeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE
Confidence 333333222222 345888888888874 445544 577888765432110000 0000 000 0000000111
Q ss_pred CCCC--------Cceeeec-------CccCcccEEEeccCCeEEEEECCCeEEEEecccCc--eeEEEEC--------Ce
Q psy2107 262 ASSR--------TPLITLK-------GHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGG--MKSEIVG--------NK 316 (391)
Q Consensus 262 ~~~~--------~~~~~~~-------~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~--------~~ 316 (391)
.... .....+. .....|.++.-..++.|..|+.+| +..++..++. ....+.. ..
T Consensus 295 GT~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 373 (758)
T 3ott_A 295 GTDYGISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHN 373 (758)
T ss_dssp EESSSEEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCS
T ss_pred EeCCcccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEEeeCCc-ceeecccccccceeEEeccCCcCCCCCCC
Confidence 0000 0011110 012357777777778888888655 5566655432 1222221 23
Q ss_pred eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecc----ccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107 317 SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS----HKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 317 ~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 389 (391)
.|.++.-.++|++-+ |+ ++-+..||..+..-.... .... ....|.++...+ ++. |-.|+..+-+.++|
T Consensus 374 ~v~~i~~d~~g~lWi-gt-~~GL~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~i~~d~-~g~-lWigT~~~Gl~~~~ 445 (758)
T 3ott_A 374 RIRHIYEDKEQQLWI-AT-DGSINRYDYATRQFIHYN-IVDNTGTYNTNWTYYIFEDT-AGQ-LWISTCLGGIFVVD 445 (758)
T ss_dssp CEEEEEECTTSCEEE-EE-TTEEEEEETTTTEEEEEE-EECCC--CBSSSEEEEEECT-TSE-EEEEESSSCEEEEE
T ss_pred ceEEEEECCCCCEEE-Ee-CCcHhhcCcCCCcEEEee-cCCCcCCCCCceEEEEEEcC-CCC-EEEEECCCceEEEc
Confidence 578888888777554 44 457899998764311111 0011 234588888776 443 44466555566665
No 343
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=91.64 E-value=0.78 Score=38.92 Aligned_cols=143 Identities=6% Similarity=0.002 Sum_probs=77.6
Q ss_pred CeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC-CCCeEEEEE--cC-CCCEEEEE-eCCCcEEEEECCCCCCCCCCCC
Q psy2107 170 DAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH-ERGLETVTV--SE-SRQQFATG-GWDCLLKIWSADISKERGDPSE 244 (391)
Q Consensus 170 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~v~~l~~--~~-~~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~ 244 (391)
+..++.++.||.|.-.|.. +++.+..+... ..++....- .+ ++..++.. +.||.|..++..++....
T Consensus 10 ~~~V~v~t~dG~l~Ald~~----tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~---- 81 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRR----NGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKL---- 81 (339)
T ss_dssp EEEEEEEETTSCEEEEETT----TTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEE----
T ss_pred CCEEEEEeCCCeEEEEECC----CCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEe----
Confidence 3478889999999988833 44555665543 112221110 01 22333333 589999999986643210
Q ss_pred CCCCCccccccccccccCCCCCceeeecC--ccCcccE---E------EeccCCeEEEEECCCeEEEEecccCceeEEEE
Q psy2107 245 NGDEGTTSKKRKKEYSSASSRTPLITLKG--HKEAISA---V------QWTAVDEIITSSWDHTLKIWDAELGGMKSEIV 313 (391)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~---~------~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 313 (391)
...... ...++.. . ..+.++.+++|+.+|.+.-.|+++|+.+..+.
T Consensus 82 -----------------------~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 82 -----------------------PLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp -----------------------EEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred -----------------------eeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 000000 0111110 0 00245789999999999999999999999987
Q ss_pred CCeee--------EEEEEC-----CCCCEEEEeeCCCcEEEEc
Q psy2107 314 GNKSF--------FDVHYS-----PLSKLVITASADKQIRLYD 343 (391)
Q Consensus 314 ~~~~i--------~~~~~~-----p~~~~l~~g~~dg~i~iwd 343 (391)
...+. .|.... ..+..|+.|..+..+.+.+
T Consensus 139 ~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~ 181 (339)
T 2be1_A 139 PGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS 181 (339)
T ss_dssp TTCBCC--------------------CCEEEEEEEEEECEECC
T ss_pred cCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC
Confidence 55321 111110 1235677776666666655
No 344
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=90.35 E-value=7.7 Score=32.99 Aligned_cols=242 Identities=10% Similarity=0.113 Sum_probs=115.9
Q ss_pred cEEEEEec--CCEEEEEECCCeEEEEcCCCceEE---ecc----CCCCCeeEEEEEecC-CCCeEEEEEe--CCCcEEEE
Q psy2107 118 WVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKL---NIP----GHGGPVKGVAWLYND-GKDAAFISVS--TDQTAMIW 185 (391)
Q Consensus 118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~---~~~----~~~~~v~~l~~~~~~-~~~~~l~s~~--~dg~v~iw 185 (391)
.-..|+|. |+++++-...|.|++++..+.... .+. ...+....|++.|.- .++.+.++-+ .++.|.-|
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~ 112 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM 112 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence 45678886 556655555899999986432222 221 234567899994311 0243434322 34455555
Q ss_pred eecCCC------CceeEE-EEEe-cCCCCeEEEEEcCCCCEEEEEeCC-------------CcEEEEECCCCCCCCCCCC
Q psy2107 186 EWKVES------NSIECI-HVCR-GHERGLETVTVSESRQQFATGGWD-------------CLLKIWSADISKERGDPSE 244 (391)
Q Consensus 186 d~~~~~------~~~~~~-~~~~-~~~~~v~~l~~~~~~~~l~sg~~d-------------g~i~iwd~~~~~~~~~~~~ 244 (391)
.+.... ...+.+ ..+. .....-..|+|.|+|.+.++.+.. |.|.-.+.+..-.
T Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip------ 186 (347)
T 3das_A 113 LYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA------ 186 (347)
T ss_dssp EBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC------
T ss_pred EeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc------
Confidence 443210 012222 2232 112234679999999877775532 2222222211000
Q ss_pred CCCCCccccccccccccCCCC-CceeeecCccCcccEEEeccCCeEEEEEC--CCeEEEEecccCc--------------
Q psy2107 245 NGDEGTTSKKRKKEYSSASSR-TPLITLKGHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGG-------------- 307 (391)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~-------------- 307 (391)
..... .....-.+|.. ...++|++.+.|+++-. |+.=.|--+..+.
T Consensus 187 ----------------~~nPf~~~~i~a~G~RN-p~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~ 249 (347)
T 3das_A 187 ----------------PGNPFPGSPVYSYGHRN-VQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGS 249 (347)
T ss_dssp ----------------TTCSSTTCCEEEBCCSB-CCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCT
T ss_pred ----------------CCCCCCCCeEEeeCCCC-cceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCc
Confidence 00000 01112224443 46788888777777643 3222222222211
Q ss_pred ----eeEEEECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCc-ceEEEEeccccCcEEEEEECCCCCCEEEEeeC
Q psy2107 308 ----MKSEIVGN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEG-AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF 381 (391)
Q Consensus 308 ----~~~~~~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 381 (391)
++..+..+ .....++|. +|.++...-..+.|....+..... ......+.+....+..|+..|++.-++++...
T Consensus 250 ~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td~~ 328 (347)
T 3das_A 250 GFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTSNT 328 (347)
T ss_dssp TCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEECTT
T ss_pred cccCCcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEcCC
Confidence 12223222 244566665 356666655566666666543211 01123344445689999999955444444434
Q ss_pred CC
Q psy2107 382 DN 383 (391)
Q Consensus 382 dg 383 (391)
||
T Consensus 329 ~g 330 (347)
T 3das_A 329 DG 330 (347)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 345
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=89.22 E-value=8.6 Score=31.94 Aligned_cols=175 Identities=7% Similarity=-0.094 Sum_probs=83.6
Q ss_pred EecCCEEEEEE--CCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCC------------cEEEEeec
Q psy2107 123 DFHNDWILTGC--YDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQ------------TAMIWEWK 188 (391)
Q Consensus 123 ~~~~~~l~t~~--~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg------------~v~iwd~~ 188 (391)
+++++.++-.. .++.|...+.++.....+.... +. -+ ++++..|.-+.... .-.|+.+.
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~~--~~--~i---~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~ 94 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSNDT--AM--YI---NADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIK 94 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTSCSCEEEEEEE--EE--EE---EECSSEEEEEEECC------CCSSCCSEEEEEEE
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCCCCCEEccCCc--ee--eE---EEcCCEEEEEECCCCcccccceeccCCCeEEEEe
Confidence 45667655554 3566777777665555544321 22 22 23566555554322 23344443
Q ss_pred CCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe--CCCcEEEE--ECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107 189 VESNSIECIHVCRGHERGLETVTVSESRQQFATGG--WDCLLKIW--SADISKERGDPSENGDEGTTSKKRKKEYSSASS 264 (391)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~--~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (391)
........+.. .. +..|+++++.|+-.. .++.-.|| +++..
T Consensus 95 ~dg~~~~~l~~-----~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs---------------------------- 139 (302)
T 3s25_A 95 RNGHGSTVLDP-----DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGE---------------------------- 139 (302)
T ss_dssp TTSCCCEEEEC-----SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSC----------------------------
T ss_pred CCCCcceEeec-----CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCC----------------------------
Confidence 44443333221 11 236777888887665 34444444 44321
Q ss_pred CCceeeecCccCcccEEEeccCCeEEEEEC-CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCC--CcEEE
Q psy2107 265 RTPLITLKGHKEAISAVQWTAVDEIITSSW-DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD--KQIRL 341 (391)
Q Consensus 265 ~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d--g~i~i 341 (391)
....+..+.. ..+.|. ++.|+-.+. ...|...++..+.....+..... ..+.|++.+|+-...+ ..|..
T Consensus 140 --~~~~lt~~~~--~~~~~~-g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~~~---~~~~P~g~~iy~t~~~~~~~I~~ 211 (302)
T 3s25_A 140 --EKKKIKNHYL--FTCNTS-DRYFYYNNPKNGQLYRYDTASQSEALFYDCNCY---KPVVLDDTNVYYMDVNRDNAIVH 211 (302)
T ss_dssp --CCEEEESSCC--CCSEEE-TTEEEEECTTTCCEEEEETTTTEEEEEECSCEE---EEEEEETTEEEEEEGGGTTEEEE
T ss_pred --CeEEEeCCCc--eEeeEE-CCEEEEEeCCCceEEEEECCCCCEEEEeCCCcc---ceeeecCCEEEEEEcCCCcEEEE
Confidence 1222222221 122222 334444433 56777777765544333332221 2345888877755433 35666
Q ss_pred EcCCCC
Q psy2107 342 YDPKVK 347 (391)
Q Consensus 342 wd~~~~ 347 (391)
-++...
T Consensus 212 ~~ldG~ 217 (302)
T 3s25_A 212 VNINNP 217 (302)
T ss_dssp ECSSSC
T ss_pred EECCCC
Confidence 666543
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=86.87 E-value=14 Score=33.58 Aligned_cols=112 Identities=13% Similarity=0.059 Sum_probs=67.4
Q ss_pred CeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec
Q psy2107 206 GLETVTVSESRQQFATGG-WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT 284 (391)
Q Consensus 206 ~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 284 (391)
....+.++|+|++++.++ .+.++.++|++.-.....-. .......+..-..-.-.....+|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k-----------------~~~~~~~~~ae~e~GlGPlHt~Fd 386 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGK-----------------LADPRDVIVGEPELGLGPLHTTFD 386 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTC-----------------CSCGGGGEEECCBCCSCEEEEEEC
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhcc-----------------ccCcccceEeeccCCCcccEEEEC
Confidence 456788899999987765 57899999987421100000 000011111111122334567888
Q ss_pred cCCeEEEEE-CCCeEEEEecccC----------ceeEEEECCeeeEEEEE------CCCCCEEEEee
Q psy2107 285 AVDEIITSS-WDHTLKIWDAELG----------GMKSEIVGNKSFFDVHY------SPLSKLVITAS 334 (391)
Q Consensus 285 ~~~~l~s~~-~dg~i~iwd~~~~----------~~~~~~~~~~~i~~~~~------~p~~~~l~~g~ 334 (391)
+.+..++.. -|..|.-|++... ..+..+..+..+-.+.- .|+|++|++..
T Consensus 387 ~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 387 GRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp SSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred CCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 777766654 7999999999754 45666666655544443 57888888874
No 347
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=86.34 E-value=33 Score=35.43 Aligned_cols=199 Identities=12% Similarity=0.086 Sum_probs=99.4
Q ss_pred CcEEEEEec-CCEEEEEECCCeEEEEcCCC--ceEEeccCC----CCCeeEEEEEecCCCCeEEEEEe-------CCCcE
Q psy2107 117 DWVSAIDFH-NDWILTGCYDHSVHIWTRRG--EHKLNIPGH----GGPVKGVAWLYNDGKDAAFISVS-------TDQTA 182 (391)
Q Consensus 117 ~~V~~~~~~-~~~l~t~~~dg~i~iwd~~~--~~~~~~~~~----~~~v~~l~~~~~~~~~~~l~s~~-------~dg~v 182 (391)
..|.--.|- .+.|+-.+ +..|.-|++.+ .....+..| ...|..-.. +++.+.++..| -.|.+
T Consensus 106 e~VvfWkWis~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~---d~~~kW~~l~gi~~~~~~v~G~m 181 (1630)
T 1xi4_A 106 DDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRT---DAKQKWLLLTGISAQQNRVVGAM 181 (1630)
T ss_pred CCceEEEecCCCeeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeee---CCCCCeEEEEeeccCCCccccee
Confidence 455555664 55554444 35799999853 333333333 233433333 55666554332 35788
Q ss_pred EEEeecCCCCceeEEEEEecCCCCeEEEEEcC--C-CCEEEEEeC---CCcEEEEECCCCCCCCCCCCCCCCCccccccc
Q psy2107 183 MIWEWKVESNSIECIHVCRGHERGLETVTVSE--S-RQQFATGGW---DCLLKIWSADISKERGDPSENGDEGTTSKKRK 256 (391)
Q Consensus 183 ~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~-~~~l~sg~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 256 (391)
.+|..+ . ...+.+.||......+.... . ...+..+.. .+.++|-++........ ...
T Consensus 182 QLyS~e--r---~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~--------~f~---- 244 (1630)
T 1xi4_A 182 QLYSVD--R---KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ--------PFP---- 244 (1630)
T ss_pred eeeecc--c---ccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCC--------CCc----
Confidence 888743 1 22344556665554444422 1 122322222 26888888854311000 000
Q ss_pred cccccCCCCCceee-ec--CccCcccEEEec-cCCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEE
Q psy2107 257 KEYSSASSRTPLIT-LK--GHKEAISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVI 331 (391)
Q Consensus 257 ~~~~~~~~~~~~~~-~~--~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~ 331 (391)
.+.+.. +. ....-..++..+ ..+.++..+.-|.+.+||+.++.++..-+-.. +|...+......-++
T Consensus 245 --------kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~ 316 (1630)
T 1xi4_A 245 --------KKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGII 316 (1630)
T ss_pred --------cccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceE
Confidence 000100 11 112223345555 55778888999999999999999876655333 444444333322233
Q ss_pred EeeCCCcEEEEcC
Q psy2107 332 TASADKQIRLYDP 344 (391)
Q Consensus 332 ~g~~dg~i~iwd~ 344 (391)
+....|.|.-..+
T Consensus 317 ~vnr~G~vl~v~v 329 (1630)
T 1xi4_A 317 GVNRKGQVLSVCV 329 (1630)
T ss_pred EEcCCceEEEEEE
Confidence 3334555544433
No 348
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=86.29 E-value=15 Score=31.60 Aligned_cols=111 Identities=9% Similarity=-0.076 Sum_probs=53.8
Q ss_pred CcEEEEEec---CCEEEEEECCC----eEEEEcCCCceEEecc------C--------CCCCeeEEEEEecCCCCeEEEE
Q psy2107 117 DWVSAIDFH---NDWILTGCYDH----SVHIWTRRGEHKLNIP------G--------HGGPVKGVAWLYNDGKDAAFIS 175 (391)
Q Consensus 117 ~~V~~~~~~---~~~l~t~~~dg----~i~iwd~~~~~~~~~~------~--------~~~~v~~l~~~~~~~~~~~l~s 175 (391)
..|.+|+++ ++.+..++..| .|...+-.+..-..+. . ....|.++++.|.+. ...+.+
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASE-PGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTS-TTCEEE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCC-CCEEEE
Confidence 468999997 34555665555 4544432222211111 1 112477788843210 334555
Q ss_pred EeCCCcEEEEeecCCCCceeEEEEEe----------------cCCCCeEEEEEcCC-CCEEEEEeCCCcEEE
Q psy2107 176 VSTDQTAMIWEWKVESNSIECIHVCR----------------GHERGLETVTVSES-RQQFATGGWDCLLKI 230 (391)
Q Consensus 176 ~~~dg~v~iwd~~~~~~~~~~~~~~~----------------~~~~~v~~l~~~~~-~~~l~sg~~dg~i~i 230 (391)
+...+.|...+ .....++.+.... .....+.+|.++|. ...|+.+..++.|..
T Consensus 134 g~~~ggl~~S~--DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~ 203 (394)
T 3b7f_A 134 GTSPQGLFRST--DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFE 203 (394)
T ss_dssp EEETTEEEEES--STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEE
T ss_pred EecCCcEEEEc--CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEE
Confidence 55566555443 3333444332111 01235789999883 344555554444433
No 349
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.09 E-value=18 Score=35.75 Aligned_cols=32 Identities=9% Similarity=0.280 Sum_probs=27.4
Q ss_pred eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107 317 SFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348 (391)
Q Consensus 317 ~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~ 348 (391)
.+.+++..++..++++-+.|+++|+|++.++.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCC
Confidence 46677778888899999999999999998765
No 350
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=83.57 E-value=5.7 Score=36.10 Aligned_cols=92 Identities=10% Similarity=0.059 Sum_probs=61.7
Q ss_pred eEEEEeccc----C-ceeEEEECCeeeEEEEECCCCCEEEEee-CCCcEEEEcCCCCC----------cceEEEEecccc
Q psy2107 297 TLKIWDAEL----G-GMKSEIVGNKSFFDVHYSPLSKLVITAS-ADKQIRLYDPKVKE----------GAIVKSTFSSHK 360 (391)
Q Consensus 297 ~i~iwd~~~----~-~~~~~~~~~~~i~~~~~~p~~~~l~~g~-~dg~i~iwd~~~~~----------~~~~~~~~~~h~ 360 (391)
.+.+.|.+. + .....+........+..+|||+++++++ .+.++.++|++... ...+..... -.
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~G 377 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LG 377 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CC
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CC
Confidence 356666654 2 3444555556677889999999887654 57899999986311 111222332 23
Q ss_pred CcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107 361 EWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390 (391)
Q Consensus 361 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl 390 (391)
-.....+|.+ +++...|.--|..|.-|++
T Consensus 378 lGPlHt~Fd~-~G~aYTtlfidSqvvkWni 406 (638)
T 3sbq_A 378 LGPLHTTFDG-RGNAYTTLFIDSQVVKWNM 406 (638)
T ss_dssp SCEEEEEECS-SSEEEEEETTTTEEEEEEH
T ss_pred CcccEEEECC-CCceEeeeeecceEEEEec
Confidence 4578899999 5566677778999999986
No 351
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.03 E-value=41 Score=33.21 Aligned_cols=36 Identities=19% Similarity=0.218 Sum_probs=28.7
Q ss_pred ccEEEec-cCCeEEEEECCCeEEEEecccCceeEEEE
Q psy2107 278 ISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKSEIV 313 (391)
Q Consensus 278 v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 313 (391)
+.+++.. ....+++-+.|+++|+|++.+++++.+..
T Consensus 238 ~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 4455555 44578899999999999999999988764
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=81.65 E-value=28 Score=30.94 Aligned_cols=104 Identities=13% Similarity=0.134 Sum_probs=0.0
Q ss_pred cEEEeccCCe--EEEEECCCeEEEEecccCc---eeEEEEC----------CeeeEEEEECCC----CCEEEEeeCCC--
Q psy2107 279 SAVQWTAVDE--IITSSWDHTLKIWDAELGG---MKSEIVG----------NKSFFDVHYSPL----SKLVITASADK-- 337 (391)
Q Consensus 279 ~~~~~~~~~~--l~s~~~dg~i~iwd~~~~~---~~~~~~~----------~~~i~~~~~~p~----~~~l~~g~~dg-- 337 (391)
+.|+|.|++. ++++...|.|++++..... .+..+.. ......++++|+ +.+.++-+.+.
T Consensus 17 ~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~~ 96 (463)
T 2wg3_C 17 VGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQER 96 (463)
T ss_dssp EEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCCS
T ss_pred eEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCCC
Q ss_pred ----------cEEEEcCCC-------CCcceEEEEec--cccCcEEEEEECCCCCCEEEEeeCCC
Q psy2107 338 ----------QIRLYDPKV-------KEGAIVKSTFS--SHKEWVQSVRWSPIDPQLFVSASFDN 383 (391)
Q Consensus 338 ----------~i~iwd~~~-------~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~dg 383 (391)
.|.-|.+.. ......+..+. .....-..|+|.| +++++++.++.+
T Consensus 97 ~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~ 160 (463)
T 2wg3_C 97 WAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGM 160 (463)
T ss_dssp SCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTT
T ss_pred cccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCC
No 353
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=77.01 E-value=35 Score=29.33 Aligned_cols=105 Identities=7% Similarity=-0.042 Sum_probs=52.5
Q ss_pred cccEEEecc---CCeEEEEECCCeEEEEecccCceeEEEE--------------------CCeeeEEEEECCC-CCEEEE
Q psy2107 277 AISAVQWTA---VDEIITSSWDHTLKIWDAELGGMKSEIV--------------------GNKSFFDVHYSPL-SKLVIT 332 (391)
Q Consensus 277 ~v~~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------------~~~~i~~~~~~p~-~~~l~~ 332 (391)
.|.++++.+ .+.+++++..+.|...+- .++.-..+. ....+.++.+.|. ...|..
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 466788874 566777776666554431 122111111 1235788999884 344444
Q ss_pred eeCCCcEEEEcCCCCCcceEEEE-ecc-c--------cCcEEEEEECCCCCCEEEEeeCCC
Q psy2107 333 ASADKQIRLYDPKVKEGAIVKST-FSS-H--------KEWVQSVRWSPIDPQLFVSASFDN 383 (391)
Q Consensus 333 g~~dg~i~iwd~~~~~~~~~~~~-~~~-h--------~~~v~~~~~~~~~~~~l~s~~~dg 383 (391)
+..++.|...+-. ++....... ... + ...+.+++++|.+...|..+...+
T Consensus 195 g~~~ggl~~s~Dg-G~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 195 GMSSGGVFESTDA-GTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp EEETBEEEEESST-TSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred EECCCCEEEECCC-CCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 5445545544321 121111100 000 0 124889999986545566665544
No 354
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=74.81 E-value=40 Score=28.98 Aligned_cols=245 Identities=11% Similarity=0.057 Sum_probs=121.7
Q ss_pred cEEEEEecCCEEEEEECCCeEEEEcCC--C-------c---eEEeccC-CCCCeeEEEEEecCCCCeEEEEEeCCCcEEE
Q psy2107 118 WVSAIDFHNDWILTGCYDHSVHIWTRR--G-------E---HKLNIPG-HGGPVKGVAWLYNDGKDAAFISVSTDQTAMI 184 (391)
Q Consensus 118 ~V~~~~~~~~~l~t~~~dg~i~iwd~~--~-------~---~~~~~~~-~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~i 184 (391)
.|..++......+.-..||.|..|-.. + . ....+.. ....+..++. +......++-..||.|..
T Consensus 54 ~i~~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i---~~G~~h~~al~~~G~v~~ 130 (389)
T 3kci_A 54 RPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV---NSGGKHCLALSSEGEVYS 130 (389)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEE---CTTCSEEEEEETTSCEEE
T ss_pred ceEEEEeCCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEE---CcCCCeEEEEcCCCCEEE
Confidence 455666667777778899999999531 1 1 1111111 1223444554 334456666788999999
Q ss_pred EeecCCC-------CceeEEEEEec-CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccc
Q psy2107 185 WEWKVES-------NSIECIHVCRG-HERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRK 256 (391)
Q Consensus 185 wd~~~~~-------~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 256 (391)
|-..... ........+.. ....|..++.. ..+.+.-..||.|..|=.....+........
T Consensus 131 wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~---------- 198 (389)
T 3kci_A 131 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSED---------- 198 (389)
T ss_dssp EECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCC----------
T ss_pred EeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcc----------
Confidence 9532110 00111111111 12256666654 3456666789999999765422221100000
Q ss_pred cccccCCCCCceeeecCccCcccEEEecc-CCeEEEEECCCeEEEEecccC-ce--------eEEEEC----CeeeEEEE
Q psy2107 257 KEYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAELG-GM--------KSEIVG----NKSFFDVH 322 (391)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~dg~i~iwd~~~~-~~--------~~~~~~----~~~i~~~~ 322 (391)
...+..........|..++... ....++-..||.|..|-.... ++ ...... ...+..++
T Consensus 199 -------~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~ 271 (389)
T 3kci_A 199 -------QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE 271 (389)
T ss_dssp -------EEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEE
T ss_pred -------cccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEe
Confidence 0001111011123455555432 345666678999999964321 10 011111 11355555
Q ss_pred ECCCCCEEEEeeCCCcEEEEcCCCC--------CcceEEEEecc-ccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107 323 YSPLSKLVITASADKQIRLYDPKVK--------EGAIVKSTFSS-HKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 323 ~~p~~~~l~~g~~dg~i~iwd~~~~--------~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 389 (391)
.. ....++-..+|.|+.|-.... ........+.. ....|..++. +....+....||.|..|-
T Consensus 272 ~G--~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~---G~~h~~al~~~G~v~~wG 342 (389)
T 3kci_A 272 CG--SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIAT---GSLHCVCCTEDGEVYTWG 342 (389)
T ss_dssp EE--TTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEE---CSSEEEEEETTCCEEEEE
T ss_pred CC--CCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEe---ccCeEEEECCCCCEEEee
Confidence 43 233344467899999964321 00111112221 2235777776 445566678899999994
No 355
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=74.46 E-value=27 Score=32.91 Aligned_cols=38 Identities=21% Similarity=0.200 Sum_probs=30.6
Q ss_pred CcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEEC
Q psy2107 276 EAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG 314 (391)
Q Consensus 276 ~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 314 (391)
..|.++.+ +...+++-+.|+++|+||+++++++.+...
T Consensus 222 ~~Is~~~~-~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLF-HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEE-TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEecc-CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 34555554 467899999999999999999998888765
No 356
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=71.37 E-value=40 Score=27.47 Aligned_cols=198 Identities=12% Similarity=0.078 Sum_probs=101.0
Q ss_pred cEEEEEecCCEEEEEECCCeEEEEcCCC-ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeE
Q psy2107 118 WVSAIDFHNDWILTGCYDHSVHIWTRRG-EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIEC 196 (391)
Q Consensus 118 ~V~~~~~~~~~l~t~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 196 (391)
.|..++......+.-. ||.|..|-... .++..-..-...|..++. ... ..+.-. ||.|..|-.+....-..+
T Consensus 64 ~i~~ia~G~~hs~~l~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~---G~~--hs~al~-~G~v~~wG~n~~gqlg~~ 136 (282)
T 3qhy_B 64 GVDAIAAGNYHSLALK-DGEVIAWGGNEDGQTTVPAEARSGVDAIAA---GAW--ASYALK-DGKVIAWGDDSDGQTTVP 136 (282)
T ss_dssp CCCEEEECSSEEEEEE-TTEEEEEECCTTSTTCCCGGGSSSEEEEEE---ETT--EEEEEE-TTEEEEEECCTTSTTSCC
T ss_pred CEEEEEeCCCEEEEEE-CCEEEEeeCCCCCCCCCCcccCCCeEEEEC---cCC--EEEEEe-CCeEEEecCCCCCcCCCC
Confidence 5677777655433335 99999996521 111110111346777776 222 333345 999999974322111100
Q ss_pred EEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccC
Q psy2107 197 IHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKE 276 (391)
Q Consensus 197 ~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (391)
......|..++...+.. +.-. ||.|..|-.....+.. .+.. -..
T Consensus 137 ----~~~~~~i~~i~~G~~~~--~~l~-~G~v~~wG~n~~gqlg-------------------------~p~~----~~~ 180 (282)
T 3qhy_B 137 ----AEAQSGVTALDGGVYTA--LAVK-NGGVIAWGDNYFGQTT-------------------------VPAE----AQS 180 (282)
T ss_dssp ----GGGGSSEEEEEECSSEE--EEEE-TTEEEEEECCTTSTTS-------------------------CCGG----GGS
T ss_pred ----ccCCCCeEEEEcccCEE--EEEE-CCEEEEecCCCCCCCC-------------------------Ccee----cCC
Confidence 11234577776654433 2233 7999999765432211 0000 123
Q ss_pred cccEEEeccCCeEEEEECCCeEEEEecccCceeE-EEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEE
Q psy2107 277 AISAVQWTAVDEIITSSWDHTLKIWDAELGGMKS-EIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKST 355 (391)
Q Consensus 277 ~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 355 (391)
.|..++-.....++. .||.|..|-......+- .......|..++..... .++. . ||.|+.|-.......
T Consensus 181 ~v~~i~~G~~hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-~~al-~-~g~v~~wG~n~~gq~----- 250 (282)
T 3qhy_B 181 GVDDVAGGIFHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWY-SLAL-K-NGKVIAWGSSRTAPS----- 250 (282)
T ss_dssp SEEEEEECSSEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSC-EEEE-E-TTEEEEESTTCCCCG-----
T ss_pred CeEEEEecCCEEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCE-EEEE-E-CCEEEEecCCCCccc-----
Confidence 455555444334444 58999999754322111 11112246666655433 3333 3 999999975543211
Q ss_pred eccccCcEEEEEECC
Q psy2107 356 FSSHKEWVQSVRWSP 370 (391)
Q Consensus 356 ~~~h~~~v~~~~~~~ 370 (391)
+-...|.+++...
T Consensus 251 --~v~~~v~~iaaG~ 263 (282)
T 3qhy_B 251 --SVQSGVSSIEAGP 263 (282)
T ss_dssp --GGSSCEEEEEECS
T ss_pred --cCCCCcEEEEECc
Confidence 1134588888755
No 357
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=64.80 E-value=37 Score=31.02 Aligned_cols=57 Identities=12% Similarity=0.177 Sum_probs=40.9
Q ss_pred ccEEEeccCCeEEEEECC-------------CeEEEEecccCceeEEEECC--eeeEEEEECCCCCEEEEee
Q psy2107 278 ISAVQWTAVDEIITSSWD-------------HTLKIWDAELGGMKSEIVGN--KSFFDVHYSPLSKLVITAS 334 (391)
Q Consensus 278 v~~~~~~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~--~~i~~~~~~p~~~~l~~g~ 334 (391)
...|.|.+.+.|..+... ..|..++..++++...+... ..++.++|+||++.|.++-
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 457888877777664432 15667777778776666544 4789999999999887763
No 358
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=57.88 E-value=47 Score=30.56 Aligned_cols=56 Identities=13% Similarity=0.191 Sum_probs=40.3
Q ss_pred ccEEEeccCCeEEEEECC-------------CeEEEEecccCceeEEEECC--eeeEEEEECCCCCEEEEe
Q psy2107 278 ISAVQWTAVDEIITSSWD-------------HTLKIWDAELGGMKSEIVGN--KSFFDVHYSPLSKLVITA 333 (391)
Q Consensus 278 v~~~~~~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~--~~i~~~~~~p~~~~l~~g 333 (391)
.-.|+|++.+.|+.+... ..+.+.+..+++..+.+..+ ..++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 356888987877776543 23556666777776666654 489999999999988765
No 359
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=57.84 E-value=21 Score=36.04 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=28.0
Q ss_pred cEEEec-cCCeEEEEECCCeEEEEecccCceeEEEE
Q psy2107 279 SAVQWT-AVDEIITSSWDHTLKIWDAELGGMKSEIV 313 (391)
Q Consensus 279 ~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 313 (391)
.+++.. ....+++-+.|+++|+|++.+++++.+..
T Consensus 241 vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 241 ISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp SCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred EEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 344444 45678899999999999999999988865
No 360
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=56.65 E-value=85 Score=26.04 Aligned_cols=192 Identities=9% Similarity=0.031 Sum_probs=102.9
Q ss_pred CCEEEEEECCCeEEEEcCCCc--------eEE--eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC-CCCc-
Q psy2107 126 NDWILTGCYDHSVHIWTRRGE--------HKL--NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV-ESNS- 193 (391)
Q Consensus 126 ~~~l~t~~~dg~i~iwd~~~~--------~~~--~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~- 193 (391)
.+.+++.+.+|.|+--.+..- -.. .+.. ...+..+.... ....++..+..|.++-..... +...
T Consensus 8 e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~---~~~~ll~~T~~G~~~~~~~~~ip~~~r 83 (312)
T 1suu_A 8 ENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVN---THDYLFMISNEGKLYLINAYEIKDSSR 83 (312)
T ss_dssp CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEE---TTCEEEEEETTSEEEEEEGGGSCC---
T ss_pred CCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEEC---CCCEEEEEECCCeEEEEEHHHCCCCCc
Confidence 456888899999987754211 111 2222 23344443322 334567778888877665321 0000
Q ss_pred ---eeE---EEEEecCCCCeEEEEEcC---CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107 194 ---IEC---IHVCRGHERGLETVTVSE---SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS 264 (391)
Q Consensus 194 ---~~~---~~~~~~~~~~v~~l~~~~---~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (391)
+.. ...+. ....|.++...+ +..+++..+..|.++...+..-.... ..
T Consensus 84 ~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r----------------------~~ 140 (312)
T 1suu_A 84 ASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVK----------------------SR 140 (312)
T ss_dssp ----CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC--------------------------
T ss_pred cCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccC----------------------CC
Confidence 000 00111 123455544332 45678889999999988875421100 00
Q ss_pred CCceeeecCccCcccEEEec-cCCeEEEEECCCeEEEEeccc---------CceeEEEECCeeeEEEEECCCCCEEEEee
Q psy2107 265 RTPLITLKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAEL---------GGMKSEIVGNKSFFDVHYSPLSKLVITAS 334 (391)
Q Consensus 265 ~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~---------~~~~~~~~~~~~i~~~~~~p~~~~l~~g~ 334 (391)
......+.. .+.+..+... ++..++..+.+|.+..+.... |.....+.....+..+....++..+++.+
T Consensus 141 G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt 219 (312)
T 1suu_A 141 GVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVS 219 (312)
T ss_dssp CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEE
T ss_pred cEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEE
Confidence 111222333 3344444443 566789999999998887653 11122223334566665555566788888
Q ss_pred CCCcEEEEcCC
Q psy2107 335 ADKQIRLYDPK 345 (391)
Q Consensus 335 ~dg~i~iwd~~ 345 (391)
..|.....++.
T Consensus 220 ~~G~~kr~~~~ 230 (312)
T 1suu_A 220 ENGYGKRLNMS 230 (312)
T ss_dssp TTSEEEEEEGG
T ss_pred CCCceEEEEHH
Confidence 89998888763
No 361
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=52.39 E-value=73 Score=29.35 Aligned_cols=58 Identities=22% Similarity=0.284 Sum_probs=37.1
Q ss_pred eEEEEECCCCCEEEEeeCC------------CcEEEEcCCCCCcceEEEEecc-ccCcEEEEEECCCCCCEEEE
Q psy2107 318 FFDVHYSPLSKLVITASAD------------KQIRLYDPKVKEGAIVKSTFSS-HKEWVQSVRWSPIDPQLFVS 378 (391)
Q Consensus 318 i~~~~~~p~~~~l~~g~~d------------g~i~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s 378 (391)
.-.|+|+|.|+++++-..+ +.+.+.+..+++ +.+.+.+ -...++.++|+||+..+++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~---~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGE---IRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCC---EEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCe---EEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4668999999976654322 235566665555 3333433 34689999999966555554
No 362
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=51.56 E-value=28 Score=35.13 Aligned_cols=31 Identities=10% Similarity=0.273 Sum_probs=25.2
Q ss_pred eEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107 318 FFDVHYSPLSKLVITASADKQIRLYDPKVKE 348 (391)
Q Consensus 318 i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~ 348 (391)
+.+++..++..++++-+.|+++|+|++.++.
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCC
Confidence 4455566778899999999999999998764
No 363
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=51.04 E-value=1.2e+02 Score=26.01 Aligned_cols=238 Identities=11% Similarity=0.080 Sum_probs=109.8
Q ss_pred cCCEEEEEECCCeEEEEcC--CCc-------eEE---ecc-CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107 125 HNDWILTGCYDHSVHIWTR--RGE-------HKL---NIP-GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES 191 (391)
Q Consensus 125 ~~~~l~t~~~dg~i~iwd~--~~~-------~~~---~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 191 (391)
....++.-..||+|..|-. .++ ... .+. .....+..++. .....+.-..||.|..|-.+...
T Consensus 9 ~~~~~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~i~~i~~-----G~~~~~~l~~~G~v~~wG~n~~G 83 (389)
T 3kci_A 9 SGRENLYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG-----GEQTLFAVTADGKLYATGYGAGG 83 (389)
T ss_dssp ------------CEEEEEECTTSTTSSCSCSEEEEEEECHHHHHTCEEEEEE-----ETTEEEEEETTSCEEEEECCGGG
T ss_pred CcccceeECCCCeEEEeeCCCCccCCCCcCccccCCEecccccCCceEEEEe-----CCCeEEEEcCCCcEEEEECCCCC
Confidence 4556666677788888843 111 111 000 01123444543 23345566789999999532110
Q ss_pred -------CceeEEEEEec-CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107 192 -------NSIECIHVCRG-HERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS 263 (391)
Q Consensus 192 -------~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (391)
........+.. ....+..++++....+.+.-..||.|..|-.....+........
T Consensus 84 qLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~----------------- 146 (389)
T 3kci_A 84 RLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP----------------- 146 (389)
T ss_dssp TTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCC-----------------
T ss_pred CCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCcc-----------------
Confidence 01111111111 22345667777777788888899999999765433221100000
Q ss_pred CCCceeeecC-ccCcccEEEeccCCeEEEEECCCeEEEEeccc-Cc--------eeEEEE----CCeeeEEEEECCCCCE
Q psy2107 264 SRTPLITLKG-HKEAISAVQWTAVDEIITSSWDHTLKIWDAEL-GG--------MKSEIV----GNKSFFDVHYSPLSKL 329 (391)
Q Consensus 264 ~~~~~~~~~~-~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~--------~~~~~~----~~~~i~~~~~~p~~~~ 329 (391)
...+. .+.. ....|..++-. ....++...+|.|..|-... ++ ...... ....+..++.......
T Consensus 147 ~~~p~-~v~~l~~~~i~~va~G-~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~ 224 (389)
T 3kci_A 147 CDRPR-VIESLRGIEVVDVAAG-GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQ 224 (389)
T ss_dssp EEEEE-ECGGGTTSCEEEEEEC-SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCE
T ss_pred CcCCe-EecccCCCeEEEEEeC-cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcE
Confidence 00011 1111 11234444433 34456667889999996532 11 011111 1124666665543345
Q ss_pred EEEeeCCCcEEEEcCCCC--------CcceEEEEecc-ccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107 330 VITASADKQIRLYDPKVK--------EGAIVKSTFSS-HKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 330 l~~g~~dg~i~iwd~~~~--------~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 389 (391)
.++-..||.|+.|-.... ........+.. ....|..++.. ..+.+.-..||.|..|-
T Consensus 225 t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G---~~hs~alt~~G~v~~wG 290 (389)
T 3kci_A 225 TLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG---SQFSVALTKSGAVYTWG 290 (389)
T ss_dssp EEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEE---TTEEEEEETTSCEEEEE
T ss_pred EEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCC---CCEEEEEeCCCeEEEEe
Confidence 555678999999964321 00111112221 12347777763 34566667899999984
No 364
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=47.14 E-value=34 Score=32.22 Aligned_cols=31 Identities=16% Similarity=0.318 Sum_probs=26.6
Q ss_pred CcEEEEEecCCEEEEEECCCeEEEEcCCCce
Q psy2107 117 DWVSAIDFHNDWILTGCYDHSVHIWTRRGEH 147 (391)
Q Consensus 117 ~~V~~~~~~~~~l~t~~~dg~i~iwd~~~~~ 147 (391)
..|.|+.+...++++-+.|.++|+|++.+.+
T Consensus 222 ~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 222 SVISCKLFHERYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp CEEEEEEETTTEEEEEETTCEEEEEETTTTE
T ss_pred ceEEEeccCCcEEEEEEcCCeEEEEEcCCCc
Confidence 4688888888899999999999999995544
No 365
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=45.37 E-value=1.7e+02 Score=26.92 Aligned_cols=61 Identities=21% Similarity=0.266 Sum_probs=39.2
Q ss_pred eeEEEEECCCCCEEEEeeC------------CCcEEEEcCCCCCcceEEEEecc-ccCcEEEEEECCCCCCEEEEee
Q psy2107 317 SFFDVHYSPLSKLVITASA------------DKQIRLYDPKVKEGAIVKSTFSS-HKEWVQSVRWSPIDPQLFVSAS 380 (391)
Q Consensus 317 ~i~~~~~~p~~~~l~~g~~------------dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~ 380 (391)
....|+|.++|.+.++... .+.+..++..+++ +...+.+ ....++.++|+||+..++++.-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGe---l~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGE---IRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCC---EEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCe---EEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 4567999999987773321 2257777766555 3333333 2356899999996666666553
No 366
>1wz3_A Autophagy 12B, ATG12B, APG12B; ubiquitin-fold, plant protein; 1.80A {Arabidopsis thaliana} SCOP: d.15.1.7
Probab=44.80 E-value=63 Score=21.29 Aligned_cols=77 Identities=14% Similarity=0.239 Sum_probs=49.9
Q ss_pred CceEEEEEEeCCCccccCCceEEEecCCCcchHHHHHHHHhccCCCCCCCCCceeeEEeCCeEe---hhhHHHHHHHcCC
Q psy2107 14 PSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGELL---RTSVTSFLESKGI 90 (391)
Q Consensus 14 ~~~v~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~f~~~~~~l---~~~~~~~l~~~~~ 90 (391)
++.|.++|..-..-=.+....+.||.+.+-.++-.++.+-|+.. . + |- .+|+.++ ...+.+.-.....
T Consensus 11 ~~KV~V~~~~~~~~P~l~k~KflV~~~~t~~~~~~~lRkrL~l~-----a--l-Fl-yvn~~~~Ps~d~~m~~LY~~~kd 81 (96)
T 1wz3_A 11 VQKIVVHLRATGGAPILKQSKFKVSGSDKFANVIDFLRRQLHSD-----S--L-FV-YVNSAFSPNPDESVIDLYNNFGF 81 (96)
T ss_dssp -CEEEEEEEECTTCCCCSCCEEEEETTSBTHHHHHHHHHHHTCS-----S--C-EE-EEEEEECCCTTSBHHHHHHHHCB
T ss_pred CCeEEEEEEECCCCCcccccEEEeCCCCcHHHHHHHHHHhcCCc-----e--E-EE-EECCcccCChhhHHHHHHHHhCC
Confidence 56899999997443346667899999999999999999988764 1 1 22 2333232 2234444444442
Q ss_pred CccceEEEEEE
Q psy2107 91 SSENVIDVEYL 101 (391)
Q Consensus 91 ~~~~~~~~~~~ 101 (391)
++.+-+.|.
T Consensus 82 --DGfLyi~Ys 90 (96)
T 1wz3_A 82 --DGKLVVNYA 90 (96)
T ss_dssp --TTBEEEEEE
T ss_pred --CCEEEEEEe
Confidence 777777775
No 367
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=44.77 E-value=1.3e+02 Score=24.79 Aligned_cols=190 Identities=8% Similarity=-0.029 Sum_probs=98.0
Q ss_pred CEEEEEECCCeEEEEcCCCceE----------EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEee---cCCCC-
Q psy2107 127 DWILTGCYDHSVHIWTRRGEHK----------LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW---KVESN- 192 (391)
Q Consensus 127 ~~l~t~~~dg~i~iwd~~~~~~----------~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~---~~~~~- 192 (391)
+.+++.+.+|.|+--.++.-.. ..+... ..+..+... .....++..+..|.+.-+.. .....
T Consensus 4 ~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~---~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 4 DVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVA---NTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp EEEEEEETTSEEEEEECC---------------------CCEEEEEEE---ETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred cEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEE---CCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 3677888899887665532111 112222 233333332 13345666677787655542 11111
Q ss_pred -ceeEEE---EEecCCCCeEEEEEc---CCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCC
Q psy2107 193 -SIECIH---VCRGHERGLETVTVS---ESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSR 265 (391)
Q Consensus 193 -~~~~~~---~~~~~~~~v~~l~~~---~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (391)
.+.++. .+. ....|.++..- .++.+++..+..|.++-..+..-.... ...
T Consensus 80 a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~----------------------r~G 136 (307)
T 1zi0_A 80 ARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLR----------------------TAG 136 (307)
T ss_dssp SCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCC----------------------TTC
T ss_pred CCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccc----------------------cCC
Confidence 112111 122 23345555432 345678999999999988774311100 001
Q ss_pred CceeeecCccCcccEEEe-ccCCeEEEEECCCeEEEEecccC---------ceeEEEECCeeeEEEEECCCCCEEEEeeC
Q psy2107 266 TPLITLKGHKEAISAVQW-TAVDEIITSSWDHTLKIWDAELG---------GMKSEIVGNKSFFDVHYSPLSKLVITASA 335 (391)
Q Consensus 266 ~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~dg~i~iwd~~~~---------~~~~~~~~~~~i~~~~~~p~~~~l~~g~~ 335 (391)
.....+..+ +.+..+.. .+...++..+.+|.+..+....- .....+.....+..+...+++..+++.+.
T Consensus 137 ~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~ 215 (307)
T 1zi0_A 137 KVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQ 215 (307)
T ss_dssp EESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEET
T ss_pred eEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEc
Confidence 111123333 33333333 35567888899998888876421 11112233345666665555667888888
Q ss_pred CCcEEEEcC
Q psy2107 336 DKQIRLYDP 344 (391)
Q Consensus 336 dg~i~iwd~ 344 (391)
.|.++-.++
T Consensus 216 ~G~~Kr~~~ 224 (307)
T 1zi0_A 216 NGYGKRTAV 224 (307)
T ss_dssp TSEEEEECG
T ss_pred CCceEEEEH
Confidence 999888876
No 368
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=42.33 E-value=1.7e+02 Score=25.25 Aligned_cols=243 Identities=14% Similarity=0.089 Sum_probs=119.8
Q ss_pred CcEEEEEecCCEEEEEECC-CeEEEEcCC--C--------c--eEEeccC-CCCCeeEEEEEecCCCCeEEEEEeCCCcE
Q psy2107 117 DWVSAIDFHNDWILTGCYD-HSVHIWTRR--G--------E--HKLNIPG-HGGPVKGVAWLYNDGKDAAFISVSTDQTA 182 (391)
Q Consensus 117 ~~V~~~~~~~~~l~t~~~d-g~i~iwd~~--~--------~--~~~~~~~-~~~~v~~l~~~~~~~~~~~l~s~~~dg~v 182 (391)
..|..++.-....+.-..| +.|+.|-.. + . ....+.. ....|..|+. .....++-..||.|
T Consensus 68 ~~i~~va~G~~ht~al~~~gg~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~-----G~~h~~alt~~G~v 142 (406)
T 4d9s_A 68 HQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIAC-----GDSHCLAVTMEGEV 142 (406)
T ss_dssp SCEEEEEECSSEEEEEETTTTEEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEE-----CSSEEEEEETTSCE
T ss_pred CCEEEEEeCcceEEEEECCCCEEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEE-----ChhheEEEcCCCcE
Confidence 3677888777666656666 499999531 1 0 1111111 2335777775 23455566789999
Q ss_pred EEEeecCCC------CceeE-EEEEec-CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccc
Q psy2107 183 MIWEWKVES------NSIEC-IHVCRG-HERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKK 254 (391)
Q Consensus 183 ~iwd~~~~~------~~~~~-~~~~~~-~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 254 (391)
..|-.+... ..... ...+.. ....|..++... .+.+.-..+|.|..|-.....+...-...
T Consensus 143 ~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~G~--~hs~alt~~G~v~~wG~n~~GqlG~g~~~--------- 211 (406)
T 4d9s_A 143 QSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGA--EHTAAVTEDGDLYGWGWGRYGNLGLGDRT--------- 211 (406)
T ss_dssp EEEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEEECS--SEEEEEETTSCEEEEECCTTSTTCSSSSC---------
T ss_pred EEeCCCCCccCCCCCCCCcccceEecccCCCcEEEEecCC--CeEEEEeCCCCEEEeeCCCCCCCCCCCCC---------
Confidence 999643211 00011 111111 122566666543 45666678999999976543222110000
Q ss_pred cccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccC-ce--------eEEEE----CCeeeEEE
Q psy2107 255 RKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELG-GM--------KSEIV----GNKSFFDV 321 (391)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~--------~~~~~----~~~~i~~~ 321 (391)
....+..........|..++-. ....+.-..+|.|..|-.... ++ ..... ....|..+
T Consensus 212 --------~~~~p~~v~~~~~~~i~~va~G-~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i 282 (406)
T 4d9s_A 212 --------DRLVPERVTSTGGEKMSMVACG-WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQI 282 (406)
T ss_dssp --------CEEEEEECCCSTTCCEEEEEEC-SSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEE
T ss_pred --------CcCccEEecccCCceEEEEEEC-CCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEE
Confidence 0000110001112234444432 344555577888888864321 10 00001 11235555
Q ss_pred EECCCCCEEEEeeCCCcEEEEcCCCCC---------cceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107 322 HYSPLSKLVITASADKQIRLYDPKVKE---------GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 322 ~~~p~~~~l~~g~~dg~i~iwd~~~~~---------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 389 (391)
+.. ....++-..||.|+.|=..... ...+..........|..++. +..+.+.-..||.|..|-
T Consensus 283 ~~G--~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~va~---G~~hs~alt~~G~v~~wG 354 (406)
T 4d9s_A 283 SGG--WRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSC---GWRHTLAVTERNNVFAWG 354 (406)
T ss_dssp EEC--SSEEEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEEEE---CSSEEEEEETTSCEEEEE
T ss_pred Eec--CCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEEEe---CCCeEEEEeCCCCEEEec
Confidence 543 2334444678899998543210 01111111122346777776 445666677899999984
No 369
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=42.28 E-value=1.5e+02 Score=24.59 Aligned_cols=198 Identities=9% Similarity=-0.009 Sum_probs=103.5
Q ss_pred CCeEEEEEeCCCcEEEEeecCCCCc-----eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCC
Q psy2107 169 KDAAFISVSTDQTAMIWEWKVESNS-----IECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPS 243 (391)
Q Consensus 169 ~~~~l~s~~~dg~v~iwd~~~~~~~-----~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 243 (391)
+..++++.+.+|.|+--.+..-... ......+.. .+.+..+........++..+..|.++-.....-..... .
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r-~ 84 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSR-A 84 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCc-c
Confidence 4567888999999998764311100 111111222 23455555555556788888899887776643111000 0
Q ss_pred CCCCCCccccccccccccCCCCCc---eeeecCccCcccEE-Ee---ccCCeEEEEECCCeEEEEecccC-------cee
Q psy2107 244 ENGDEGTTSKKRKKEYSSASSRTP---LITLKGHKEAISAV-QW---TAVDEIITSSWDHTLKIWDAELG-------GMK 309 (391)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~-~~---~~~~~l~s~~~dg~i~iwd~~~~-------~~~ 309 (391)
....+ ...+.. ...|..+ .. .++..++..+..|.++...+..- ...
T Consensus 85 -------------------~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~ 144 (312)
T 1suu_A 85 -------------------SKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIV 144 (312)
T ss_dssp ----------------------CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEEC
T ss_pred -------------------CCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEE
Confidence 00000 111221 2223333 22 24566888999999998877532 222
Q ss_pred EEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC----C--cceEEEEeccccCcEEEEEECCCCCCEEEEeeCCC
Q psy2107 310 SEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK----E--GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN 383 (391)
Q Consensus 310 ~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~----~--~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg 383 (391)
..+.....+..+........++..+.+|.+..+....- . .......+.. ...|.++.... ++..+++.+..|
T Consensus 145 i~L~~~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~-~~~~l~~vt~~G 222 (312)
T 1suu_A 145 IKLNDKDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVK-ENPYLLIVSENG 222 (312)
T ss_dssp BCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECT-TCSEEEEEETTS
T ss_pred EecCCCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEEC-CCCeEEEEECCC
Confidence 22333345555555444567777888998888875321 1 0111112222 34566665544 334577888888
Q ss_pred cEEEEec
Q psy2107 384 SVKLWDL 390 (391)
Q Consensus 384 ~v~iwdl 390 (391)
..+...+
T Consensus 223 ~~kr~~~ 229 (312)
T 1suu_A 223 YGKRLNM 229 (312)
T ss_dssp EEEEEEG
T ss_pred ceEEEEH
Confidence 8877654
No 370
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=42.14 E-value=1.4e+02 Score=24.47 Aligned_cols=103 Identities=10% Similarity=0.082 Sum_probs=55.7
Q ss_pred EEEEEecCCEEEEEECC--------------CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEe--CCCcE
Q psy2107 119 VSAIDFHNDWILTGCYD--------------HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVS--TDQTA 182 (391)
Q Consensus 119 V~~~~~~~~~l~t~~~d--------------g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~--~dg~v 182 (391)
+..+...+++|+-+... ..|+..++++.....+.... . ..|.+ +++.|+-.. .++.-
T Consensus 57 ~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~--~--~~~s~---~g~~Iy~~~~~~~~~~ 129 (302)
T 3s25_A 57 AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP--C--IYASL---IGNYIYYLHYDTQTAT 129 (302)
T ss_dssp EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSC--E--EEEEE---ETTEEEEEEESSSSCE
T ss_pred eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCC--c--cEEEE---eCCEEEEEeecCCCCc
Confidence 34455557766655442 36777777665544443222 2 24533 455565554 45666
Q ss_pred EEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCC
Q psy2107 183 MIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW-DCLLKIWSADI 235 (391)
Q Consensus 183 ~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~ 235 (391)
.||.+.......+. +..+.. .+++++++.|+-.+. ...|..-++..
T Consensus 130 ~Iy~~~~dGs~~~~---lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g 176 (302)
T 3s25_A 130 SLYRIRIDGEEKKK---IKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTAS 176 (302)
T ss_dssp EEEEEETTSCCCEE---EESSCC----CCSEEETTEEEEECTTTCCEEEEETTT
T ss_pred eEEEEECCCCCeEE---EeCCCc----eEeeEECCEEEEEeCCCceEEEEECCC
Confidence 67766555443332 222222 345777777775554 56777777654
No 371
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=40.25 E-value=1.8e+02 Score=25.00 Aligned_cols=90 Identities=12% Similarity=0.026 Sum_probs=0.0
Q ss_pred eEEEEecccC--ceeEEEECCee-------eEEEEEC---C-----CCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc
Q psy2107 297 TLKIWDAELG--GMKSEIVGNKS-------FFDVHYS---P-----LSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH 359 (391)
Q Consensus 297 ~i~iwd~~~~--~~~~~~~~~~~-------i~~~~~~---p-----~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h 359 (391)
.|.+||+.+. +.++++..+.. +..+.+. | ++-..++=+..+.|.|+|+.+++...........
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Q ss_pred c---------------CcEEEEEECCC----CCCEEEEeeCCCcEE
Q psy2107 360 K---------------EWVQSVRWSPI----DPQLFVSASFDNSVK 386 (391)
Q Consensus 360 ~---------------~~v~~~~~~~~----~~~~l~s~~~dg~v~ 386 (391)
. ..|..|+.+|+ +..+....-....+.
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly 249 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVY 249 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEE
No 372
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=40.11 E-value=1.6e+02 Score=24.54 Aligned_cols=162 Identities=10% Similarity=0.051 Sum_probs=86.6
Q ss_pred CCeEEEEEcC---CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEE
Q psy2107 205 RGLETVTVSE---SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAV 281 (391)
Q Consensus 205 ~~v~~l~~~~---~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 281 (391)
..|.++..-+ +..+++..+.+|.++--.+..-.... ........+.....-+...
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~----------------------r~G~~~i~lke~D~lv~~~ 152 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNR----------------------SGGIVAVNLRDNDELVGAV 152 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCC----------------------SSCEESCBCCTTCCEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccc----------------------cCceEEEEECCCCEEEEEE
Confidence 4455554433 57789999999999988875422100 0011112233322333333
Q ss_pred EeccCCeEEEEECCCeEEEEecc--c---------CceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC--
Q psy2107 282 QWTAVDEIITSSWDHTLKIWDAE--L---------GGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE-- 348 (391)
Q Consensus 282 ~~~~~~~l~s~~~dg~i~iwd~~--~---------~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~-- 348 (391)
.......++..+..|.+..+... . |.....+.....|..+...+.+.+++..+..|.++.-.+..-.
T Consensus 153 ~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~ 232 (327)
T 3uc1_A 153 LCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQ 232 (327)
T ss_dssp EECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBC
T ss_pred EecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHcccc
Confidence 33455678888889988877665 2 1111223334466666666667788888999998887643211
Q ss_pred ----cceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107 349 ----GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 349 ----~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 389 (391)
.......+..-.+.+..+.... +...++..+.+|.+.-++
T Consensus 233 ~R~~~G~~~~~l~~~~d~lv~~~~~~-~~~~i~l~T~~G~~ir~~ 276 (327)
T 3uc1_A 233 GRGGKGVLTVMYDRRRGRLVGALIVD-DDSELYAVTSGGGVIRTA 276 (327)
T ss_dssp CTTSCCEESSCCCTTTCSEEEEEEEC-TTCEEEEEEGGGCEEEEE
T ss_pred CcCCCcEEEEEecCCCCeEEEEEEeC-CCccEEEEcCCCeEEEEe
Confidence 1111112222123354444433 333455566677665553
No 373
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=36.00 E-value=2.1e+02 Score=24.66 Aligned_cols=253 Identities=9% Similarity=-0.023 Sum_probs=124.8
Q ss_pred cEEEEEecCCEEEEEECCCeEEEEcCC--Cc------------eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEE
Q psy2107 118 WVSAIDFHNDWILTGCYDHSVHIWTRR--GE------------HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAM 183 (391)
Q Consensus 118 ~V~~~~~~~~~l~t~~~dg~i~iwd~~--~~------------~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~ 183 (391)
.|..|+......+.-..||.|+.|-.. ++ ....+ .....|..|+. .....++-..||.|.
T Consensus 76 ~v~~va~G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v-~~~~~i~~va~-----G~~hs~al~~~G~v~ 149 (423)
T 3mvd_K 76 DAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLI-DLPGKALCISA-----GDSHSACLLEDGRVF 149 (423)
T ss_dssp SEEEEEECSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEEC-CCSSCEEEEEE-----CSSEEEEEETTSCEE
T ss_pred CceEEeeCCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEE-cCCCCEEEEEc-----CcCeEEEEeCCCeEE
Confidence 477888778888888999999999541 11 11111 12345666665 233455567899999
Q ss_pred EEee--cCCC------CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccc
Q psy2107 184 IWEW--KVES------NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKR 255 (391)
Q Consensus 184 iwd~--~~~~------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 255 (391)
.|-. +... ...............|..++... .+.+.-..+|.|..|=.....+..............
T Consensus 150 ~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G~--~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~--- 224 (423)
T 3mvd_K 150 AWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGA--DHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGR--- 224 (423)
T ss_dssp EEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEECS--SEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCST---
T ss_pred EEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecCC--CeEEEEecCCeEEEeeCCcCCccCCCcccccccccc---
Confidence 9973 1100 00111111111234566666543 456666789999999765433332211100000000
Q ss_pred ccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCc-----------eeEEEE-CCeeeEEEEE
Q psy2107 256 KKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGG-----------MKSEIV-GNKSFFDVHY 323 (391)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-----------~~~~~~-~~~~i~~~~~ 323 (391)
........+..........|..++-.....++.-..++.|..|-..... ...... ....|..++.
T Consensus 225 ---~~~~~~~~p~~v~~~~~~~v~~i~~g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~ 301 (423)
T 3mvd_K 225 ---RGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAG 301 (423)
T ss_dssp ---TTTTTTSSCEEECCTTCCCEEEEEEETTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEE
T ss_pred ---cccccccCCeEEeecCCccEEEEEECCcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEc
Confidence 0000001122111122234555543333334444678888888643211 001111 1234555554
Q ss_pred CCCCCEEEEeeCCCcEEEEcCCCC---------CcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107 324 SPLSKLVITASADKQIRLYDPKVK---------EGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 324 ~p~~~~l~~g~~dg~i~iwd~~~~---------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 389 (391)
. ....++-..+|.|+.|=.... ........+..-...|..|+.. ....+.-..||.|+.|-
T Consensus 302 G--~~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G---~~hs~alt~~G~v~~wG 371 (423)
T 3mvd_K 302 G--QHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCG---EVCSYAVTIDGKLYSWG 371 (423)
T ss_dssp C--SSEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEE---TTEEEEEETTSCEEEEE
T ss_pred c--cCeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcC---CCeEEEEcCCCCEEEEC
Confidence 3 234444467899999964311 0011112222223368888774 34555567899999994
No 374
>3lkx_A Transcription factor BTF3; beta-barrel, chaperone; 2.50A {Homo sapiens}
Probab=32.08 E-value=14 Score=22.45 Aligned_cols=43 Identities=14% Similarity=0.278 Sum_probs=32.4
Q ss_pred EEEEEEeCCCccccCCceEEEecCCCcchHHHHHHHHhccCCC
Q psy2107 17 VQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSN 59 (391)
Q Consensus 17 v~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~ll~~~~~ 59 (391)
.-+||..-..+..++..+|.|-+.....++++|+-.++.+.+.
T Consensus 18 ~vihF~nPkVqaS~~aNT~vv~G~~e~K~l~ellP~Il~qlG~ 60 (66)
T 3lkx_A 18 TVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGA 60 (66)
T ss_dssp EEEEEESCEEEEECC-CEEEEESCEEEEEGGGGTTGGGGGCCT
T ss_pred EEEEecCcceEEeeccCeeEecCCCEEeEHHHHChhhhhccCh
Confidence 4577776555555777799999999999999998888877543
No 375
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=31.92 E-value=3.4e+02 Score=25.73 Aligned_cols=106 Identities=15% Similarity=0.119 Sum_probs=55.8
Q ss_pred cEEEEEec---CCEEEEEECCCeEEEEcCCCceEEeccCC-------CCCeeEEEEEecCCCCeEEEEEeC-C-----Cc
Q psy2107 118 WVSAIDFH---NDWILTGCYDHSVHIWTRRGEHKLNIPGH-------GGPVKGVAWLYNDGKDAAFISVST-D-----QT 181 (391)
Q Consensus 118 ~V~~~~~~---~~~l~t~~~dg~i~iwd~~~~~~~~~~~~-------~~~v~~l~~~~~~~~~~~l~s~~~-d-----g~ 181 (391)
.|.+|+++ ++.++++...|.|..++-.+..-..+..+ ...|.+|++.|.+++ ..+++.+. . +.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~-~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPN-RVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTT-CEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCC-EEEEEecccccccccCC
Confidence 78889987 35677777667666665444433333222 245889999664333 33333321 1 12
Q ss_pred EEEEeecCCCCceeEEEEEe---cC---CCCeEEEEEcCC-CCEEEEEeC
Q psy2107 182 AMIWEWKVESNSIECIHVCR---GH---ERGLETVTVSES-RQQFATGGW 224 (391)
Q Consensus 182 v~iwd~~~~~~~~~~~~~~~---~~---~~~v~~l~~~~~-~~~l~sg~~ 224 (391)
..+|.-.....+++.+..-. .+ ...+..|+++|. ...++.+..
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec
Confidence 45565433444555443210 00 113467999885 355666653
No 376
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=31.38 E-value=2.4e+02 Score=25.65 Aligned_cols=72 Identities=4% Similarity=-0.129 Sum_probs=44.5
Q ss_pred eeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe--cCCCCeE-EEEEcCCCCEEEEEeCCCcEEE
Q psy2107 158 VKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR--GHERGLE-TVTVSESRQQFATGGWDCLLKI 230 (391)
Q Consensus 158 v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~--~~~~~v~-~l~~~~~~~~l~sg~~dg~i~i 230 (391)
.++|+... ..+...++.|..+|.|.-..+.........+..+. ....+|. .|.+++++.+|++++.++.+++
T Consensus 402 lT~vav~~-~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYV-YNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEE-ETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEeec-cCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 45555543 23456788899999887665432211112233332 2245785 8999999999999988765554
No 377
>4gdk_A Ubiquitin-like protein ATG12; protein-protein conjugate, protein-protein complex, ubiquiti protein, E3 ligase, ubiquitin-like fold; 2.70A {Homo sapiens} PDB: 4gdl_A
Probab=30.95 E-value=1.1e+02 Score=19.86 Aligned_cols=80 Identities=16% Similarity=0.257 Sum_probs=53.9
Q ss_pred ceEEEEEEeCCCccccCCceEEEecCCCcchHHHHHHHHhccCCCCCCCCCceeeEEeCCeEe---hhhHHHHHHHcCCC
Q psy2107 15 SEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGELL---RTSVTSFLESKGIS 91 (391)
Q Consensus 15 ~~v~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~f~~~~~~l---~~~~~~~l~~~~~~ 91 (391)
+.|.++|..-..-=.+....+.||.+.+-.++-.++.+-|+-..++. +=+++|+.+. ...+.+.-....
T Consensus 4 ~Kv~v~fk~~g~~P~l~k~KflVp~~~tv~~~~~~lRkrL~l~~~~a------lFlyVnn~~~P~~d~~~~~Ly~~~k-- 75 (91)
T 4gdk_A 4 KKIDILLKAVGDTPIMKTKKWAVERTRTIQGLIDFIKKFLKLVASEQ------LFIYVNQSFAPSPDQEVGTLYECFG-- 75 (91)
T ss_dssp CEEEEEEEECSSSCCCSCCEEEEETTCBHHHHHHHHHHHTTCCSSSC------CEEEETTTBCCCTTCBHHHHHHHHC--
T ss_pred ceEEEEEEecCCCCcccccEEEcCCCCCHHHHHHHHHHHhCCCCCCe------EEEEECCccCCChhhHHHHHHHHhC--
Confidence 46999999864333466678999999999999999988887654322 3344566543 234555555554
Q ss_pred ccceEEEEEEe
Q psy2107 92 SENVIDVEYLE 102 (391)
Q Consensus 92 ~~~~~~~~~~~ 102 (391)
.++.+-+.|..
T Consensus 76 ~DGfLyv~Ys~ 86 (91)
T 4gdk_A 76 SDGKLVLHYCK 86 (91)
T ss_dssp BTTEEEEEEES
T ss_pred CCCEEEEEEeC
Confidence 67788887763
No 378
>3mcb_B Transcription factor BTF3; beta-barrel like structure, NAC, heterodimer, chaperone; 1.90A {Homo sapiens}
Probab=30.01 E-value=12 Score=21.98 Aligned_cols=39 Identities=15% Similarity=0.324 Sum_probs=29.5
Q ss_pred EEEEEEeCCCccccCCceEEEecCCCcchHHHHHHHHhc
Q psy2107 17 VQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILK 55 (391)
Q Consensus 17 v~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~ll~ 55 (391)
.-+||..-..+..++..+|.|.+.....+|++|+-.++.
T Consensus 18 ~vihF~nPkVqaS~~aNTfvv~G~~e~K~l~e~lP~Il~ 56 (58)
T 3mcb_B 18 TVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILN 56 (58)
T ss_dssp EEEEEESCEEEEETTTTEEEEESCEEEEEGGGGTTGGGG
T ss_pred EEEEecCcceEEeeccceEEEecCCeeeEHHHHChhhhh
Confidence 557777665555677789999999888899887766654
No 379
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=29.65 E-value=2.7e+02 Score=23.90 Aligned_cols=241 Identities=12% Similarity=0.147 Sum_probs=120.0
Q ss_pred CcEEEEEecCCEEEEEECCCeEEEEcCC--Cc----------eEEeccC-CCCCeeEEEEEecCCCCeEEEEEeCC-CcE
Q psy2107 117 DWVSAIDFHNDWILTGCYDHSVHIWTRR--GE----------HKLNIPG-HGGPVKGVAWLYNDGKDAAFISVSTD-QTA 182 (391)
Q Consensus 117 ~~V~~~~~~~~~l~t~~~dg~i~iwd~~--~~----------~~~~~~~-~~~~v~~l~~~~~~~~~~~l~s~~~d-g~v 182 (391)
..|..|+.-....+.-..||.|..|-.. ++ ....+.. ....|..++. . ....++-..+ +.|
T Consensus 16 ~~v~~ia~G~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~---G--~~ht~al~~~gg~v 90 (406)
T 4d9s_A 16 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC---G--ADHTVAYSQSGMEV 90 (406)
T ss_dssp CCEEEEEECSSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEE---C--SSEEEEEETTTTEE
T ss_pred cceEEEecCCCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEe---C--cceEEEEECCCCEE
Confidence 3677888877887888889999999531 11 1112211 2335777775 2 2233334445 589
Q ss_pred EEEeecCCC------C--ceeEEEEEec-CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccc
Q psy2107 183 MIWEWKVES------N--SIECIHVCRG-HERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSK 253 (391)
Q Consensus 183 ~iwd~~~~~------~--~~~~~~~~~~-~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 253 (391)
..|-..... . ...+. .+.. ....|..++.. ..+.+.-..||.|..|-.....+........
T Consensus 91 ~~wG~n~~GqLG~g~~~~~~~p~-~v~~l~~~~i~~ia~G--~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~------- 160 (406)
T 4d9s_A 91 YSWGWGDFGRLGHGNSSDLFTPL-PIKALHGIRIKQIACG--DSHCLAVTMEGEVQSWGRNQNGQLGLGDTED------- 160 (406)
T ss_dssp EEEECCGGGTTCSSSCCCEEEEE-ECGGGTTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSCCC-------
T ss_pred EEEcCCCCcCCCCCCCCccccce-EecccCCCCEEEEEEC--hhheEEEcCCCcEEEeCCCCCccCCCCCCCC-------
Confidence 999532110 0 01111 1111 22356666654 3456666789999999865433322100000
Q ss_pred ccccccccCCCCCceeeecC-ccCcccEEEeccCCeEEEEECCCeEEEEecccC-c--------eeE--EEE--CCeeeE
Q psy2107 254 KRKKEYSSASSRTPLITLKG-HKEAISAVQWTAVDEIITSSWDHTLKIWDAELG-G--------MKS--EIV--GNKSFF 319 (391)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~--------~~~--~~~--~~~~i~ 319 (391)
...+. .+.. ....|..++-. ....++-..+|.|..|-.... + ... .+. ....+.
T Consensus 161 ----------~~~p~-~v~~~~~~~i~~va~G-~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~ 228 (406)
T 4d9s_A 161 ----------SLVPQ-KIQAFEGIRIKMVAAG-AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS 228 (406)
T ss_dssp ----------EEEEE-ECGGGTTCCEEEEEEC-SSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEE
T ss_pred ----------cccce-EecccCCCcEEEEecC-CCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEE
Confidence 00000 1111 11234444433 344556678899999964321 1 000 011 112455
Q ss_pred EEEECCCCCEEEEeeCCCcEEEEcCCCCC--------cceEEEEecc-ccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107 320 DVHYSPLSKLVITASADKQIRLYDPKVKE--------GAIVKSTFSS-HKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389 (391)
Q Consensus 320 ~~~~~p~~~~l~~g~~dg~i~iwd~~~~~--------~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 389 (391)
.++.. ....++-..+|.|+.|-..... .......+.. ....|..++. +..+.+.-..||.|..|-
T Consensus 229 ~va~G--~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~---G~~hs~alt~~G~v~~wG 302 (406)
T 4d9s_A 229 MVACG--WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISG---GWRHTMALTSDGKLYGWG 302 (406)
T ss_dssp EEEEC--SSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEE---CSSEEEEEETTSCEEEEE
T ss_pred EEEEC--CCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEe---cCCEEEEEcCCCeEEEee
Confidence 55543 2334444678899998643211 0111111211 2234777776 445566667889999884
No 380
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=29.64 E-value=2.2e+02 Score=22.96 Aligned_cols=200 Identities=9% Similarity=0.016 Sum_probs=102.6
Q ss_pred CCeeEEEEEecCCCCeEEEEEeCCCcEEEEeec-CCCCceeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEC
Q psy2107 156 GPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWK-VESNSIECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLLKIWSA 233 (391)
Q Consensus 156 ~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~ 233 (391)
..+..+.... ....|+.-+.+|.++--... .+......+ +. ....|..+.... +..+++..+.+|.++-..+
T Consensus 24 D~~~~~~~~~---t~~~ll~fT~~G~v~~~~~~~lp~~~~~~l--l~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l 97 (276)
T 3no0_A 24 APVVNILRVP---FTEGLFLVSNRGRVYWIAGSQALQGSKVSL--KS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPL 97 (276)
T ss_dssp CCEEEEEEEE---TTSCEEEEETTSEEEEECSHHHHTSEECCC--SS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEG
T ss_pred CeEEEEEEEC---CCCEEEEEcCCCeEEEEEhhhCccCccccc--CC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEH
Confidence 4455554433 23346666778876643311 111111112 32 345566665421 4678999999999999887
Q ss_pred CCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec-cCCeEEEEECCCeEEEEeccc-------
Q psy2107 234 DISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAEL------- 305 (391)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~------- 305 (391)
..-. .. ........++. ...+..+... ....++..+..|.+..+....
T Consensus 98 ~~~~-~~----------------------~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~ 153 (276)
T 3no0_A 98 AEFE-YK----------------------AQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPG 153 (276)
T ss_dssp GGTT-TC----------------------STTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred HHhh-hh----------------------cCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCC
Confidence 5421 00 00111112222 2333333333 455788889999988877532
Q ss_pred --CceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC----cceEEEEeccccCcEEEEEECCCCCCEEEEe
Q psy2107 306 --GGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE----GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSA 379 (391)
Q Consensus 306 --~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 379 (391)
|.....+.....+..+...+++..++..+..|.++...+..-. ...-...+ ...+.+..+.... +...++..
T Consensus 154 a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~-~~~~i~~~ 231 (276)
T 3no0_A 154 ARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIK-EEVELLIT 231 (276)
T ss_dssp CCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEES-SEEEEEEE
T ss_pred CCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeC-CCCEEEEE
Confidence 1111223333456655555556788888899998888653211 10011112 2234455543333 33346666
Q ss_pred eCCCcEEE
Q psy2107 380 SFDNSVKL 387 (391)
Q Consensus 380 ~~dg~v~i 387 (391)
+.+|.+..
T Consensus 232 t~~G~~ir 239 (276)
T 3no0_A 232 TKNGKAFY 239 (276)
T ss_dssp ETTSCEEE
T ss_pred cCCCeEEE
Confidence 77777765
No 381
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=25.99 E-value=3.1e+02 Score=23.38 Aligned_cols=151 Identities=7% Similarity=-0.017 Sum_probs=78.7
Q ss_pred CCEEEEEECCCeEEEEcCC----------CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEee---cCCC-
Q psy2107 126 NDWILTGCYDHSVHIWTRR----------GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW---KVES- 191 (391)
Q Consensus 126 ~~~l~t~~~dg~i~iwd~~----------~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~---~~~~- 191 (391)
.+.+++.+.+|.|+--.++ +.....+.. ...+..+... + ....++..+..|.+.-+.. ....
T Consensus 7 e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~--~-t~d~ll~fT~~G~~~~~~~~eip~~~r 82 (370)
T 3l6v_A 7 EDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLV--N-THDTLLTFTSSGKVFWLPVHQLPEAGS 82 (370)
T ss_dssp CCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEE--C-TTCEEEEEETTSEEEEEEGGGSCBCCT
T ss_pred CCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEe--c-CCCEEEEEeCCCeEEEEEHHHCcCCCc
Confidence 4578899999999875431 122233433 3445444442 2 3445666677887765542 1111
Q ss_pred -CceeEEE---EEecCCCCeEEEEEcC---CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107 192 -NSIECIH---VCRGHERGLETVTVSE---SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS 264 (391)
Q Consensus 192 -~~~~~~~---~~~~~~~~v~~l~~~~---~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (391)
..+..+. .+. ....|.++..-. .+.+|+.++..|.++...+..-.... ..
T Consensus 83 ~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~----------------------~~ 139 (370)
T 3l6v_A 83 NARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRL----------------------AR 139 (370)
T ss_dssp TSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCC----------------------TT
T ss_pred ccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhccc----------------------CC
Confidence 1111111 122 234555554432 45689999999999998875422100 00
Q ss_pred CCceeeecCccCcccEEEe-ccCCeEEEEECCCeEEEEecc
Q psy2107 265 RTPLITLKGHKEAISAVQW-TAVDEIITSSWDHTLKIWDAE 304 (391)
Q Consensus 265 ~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~dg~i~iwd~~ 304 (391)
......+.. ...+..+.. .++..++..+..|.+..+...
T Consensus 140 G~~ai~L~~-~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 140 GKIAINLDE-GDALVGVALTDGDRDVLLFASNGKTVRFGES 179 (370)
T ss_dssp CEESSCCCT-TCCEEEEEEECSCCEEEEEETTSEEEEEEGG
T ss_pred ceEEEEeCC-CCEEEEEEEeCCCceEEEEeCCCeEEEEEcc
Confidence 111112222 223333333 355678888888888777754
No 382
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=24.62 E-value=2.2e+02 Score=25.49 Aligned_cols=77 Identities=6% Similarity=-0.047 Sum_probs=0.0
Q ss_pred CCceeeecCccCcccEEEec-c----CCe--EEEEECCCeEEEEecccCc-----------eeEEEECCeeeEEEEECCC
Q psy2107 265 RTPLITLKGHKEAISAVQWT-A----VDE--IITSSWDHTLKIWDAELGG-----------MKSEIVGNKSFFDVHYSPL 326 (391)
Q Consensus 265 ~~~~~~~~~~~~~v~~~~~~-~----~~~--l~s~~~dg~i~iwd~~~~~-----------~~~~~~~~~~i~~~~~~p~ 326 (391)
..++..........++|+.. - +++ ++.|+.+|.|.=.-+.... .+..+....+|..+.++++
T Consensus 393 ~~Pll~~~~~~~~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~ 472 (495)
T 1q47_A 393 NRPIMIKTDVNYQFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTK 472 (495)
T ss_dssp GSCSEEESSSSSCEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETT
T ss_pred cccEEEecCCccceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCC
Q ss_pred CCEEEEeeCCCcEEE
Q psy2107 327 SKLVITASADKQIRL 341 (391)
Q Consensus 327 ~~~l~~g~~dg~i~i 341 (391)
..+|.+++.++.++|
T Consensus 473 ~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 473 QQQLYIGSTAGVAQL 487 (495)
T ss_dssp TTEEEEEBSSCEEEE
T ss_pred CCEEEEEECCeEEEE
No 383
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=22.84 E-value=3.3e+02 Score=25.49 Aligned_cols=58 Identities=9% Similarity=0.041 Sum_probs=37.2
Q ss_pred eEEEEEeCCCcEEEEeecCCCCceeEEEEEe--cCCCCeEEEEEcCCC--CEEEEEeCCCcEEE
Q psy2107 171 AAFISVSTDQTAMIWEWKVESNSIECIHVCR--GHERGLETVTVSESR--QQFATGGWDCLLKI 230 (391)
Q Consensus 171 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~--~~~~~v~~l~~~~~~--~~l~sg~~dg~i~i 230 (391)
..++.|..+|.|.-.-.. .. ....+.... ....+|..|.++++. .+|++++.++.+++
T Consensus 416 tV~flGT~~G~l~Kvv~~-~~-~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 416 DVMFVSTDRGALHKAISL-EH-AVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEETTSEEEEEEEC-SS-SEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEEcCCcEEEEEEec-CC-CceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 467788899987544221 11 222222222 235689999999987 89999888876665
No 384
>2eke_C Ubiquitin-like protein SMT3; UBC9, SUMO binding motif, SBM, ligase/protein binding complex; 1.90A {Saccharomyces cerevisiae} SCOP: d.15.1.1
Probab=22.81 E-value=1.8e+02 Score=19.51 Aligned_cols=72 Identities=17% Similarity=0.319 Sum_probs=41.8
Q ss_pred CCceEEEEEEeCCCccccCCceEEEecCCCcchHHHHHHHHhccCCCCCCCCCceeeEEeCCeEehhhHHHHHHHcCCCc
Q psy2107 13 VPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGELLRTSVTSFLESKGISS 92 (391)
Q Consensus 13 ~~~~v~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~~~~~~~ 92 (391)
....+++...+ ++. .-.+.|-.+ ..+..+.+.+....+-.. -.+.|..+|+.+... ......++..
T Consensus 28 ~~~~I~IkV~~-~g~----~i~fkIk~t---t~l~kL~~ay~ek~gi~~----~~~rF~FdG~rl~~~--~Tp~dl~med 93 (106)
T 2eke_C 28 PETHINLKVSD-GSS----EIFFKIKKT---TPLRRLMEAFAKRQGKEM----DSLRFLYDGIRIQAD--QTPEDLDMED 93 (106)
T ss_dssp CCSEEEEEEEC-SSC----EEEEEEETT---SCTHHHHHHHHHHHTCCG----GGEEEEETTEECCTT--CCTTTTTCCT
T ss_pred CCCeEEEEEec-CCc----EEEEEeCCC---CHHHHHHHHHHHHhCCCc----ccEEEEECCeEcCCC--CCHHHcCCCC
Confidence 35678888887 554 124555433 357778888877655333 457888899877531 2233334444
Q ss_pred cceEEE
Q psy2107 93 ENVIDV 98 (391)
Q Consensus 93 ~~~~~~ 98 (391)
+..+.+
T Consensus 94 gD~Idv 99 (106)
T 2eke_C 94 NDIIEA 99 (106)
T ss_dssp TEEEEE
T ss_pred CCEEEE
Confidence 555544
No 385
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=20.10 E-value=4.3e+02 Score=24.79 Aligned_cols=60 Identities=8% Similarity=0.014 Sum_probs=37.4
Q ss_pred eEEEEEeCCCcEEEEeecCCCC----ceeEEEEEe--cCCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy2107 171 AAFISVSTDQTAMIWEWKVESN----SIECIHVCR--GHERGLETVTVSESRQQFATGGWDCLLKI 230 (391)
Q Consensus 171 ~~l~s~~~dg~v~iwd~~~~~~----~~~~~~~~~--~~~~~v~~l~~~~~~~~l~sg~~dg~i~i 230 (391)
..++.|+.+|.|.---+..... ....+..+. ....+|..|.++++..+|.+++.++.+++
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4677888999875322111110 011222222 34668999999999999999998876665
Done!