RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2107
(391 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 99.0 bits (245), Expect = 4e-24
Identities = 53/318 (16%), Positives = 116/318 (36%), Gaps = 59/318 (18%)
Query: 115 HDDWVSAIDFHND--WILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVA--------- 162
H V+ + FH +++ D ++ +W G+ + + GH V+ ++
Sbjct: 16 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 75
Query: 163 ------------------------------WLYNDGKDAAFISVSTDQTAMIWEWKVESN 192
+ +S S D+T +WE
Sbjct: 76 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV----Q 131
Query: 193 SIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTS 252
+ C+ GH + V ++ A+ D +++W + + + E+
Sbjct: 132 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECI 191
Query: 253 KKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEI 312
+ S+ S + + +++ S D T+K+WD G +
Sbjct: 192 SWAPESSYSSIS--------EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 243
Query: 313 VGNKSF-FDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI 371
VG+ ++ V + K +++ + DK +R++D K +K T ++H+ +V S+ +
Sbjct: 244 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWD--YKNKRCMK-TLNAHEHFVTSLDFHK- 299
Query: 372 DPQLFVSASFDNSVKLWD 389
V+ S D +VK+W+
Sbjct: 300 TAPYVVTGSVDQTVKVWE 317
Score = 71.7 bits (174), Expect = 2e-14
Identities = 39/236 (16%), Positives = 88/236 (37%), Gaps = 17/236 (7%)
Query: 110 LDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGK 169
+ H+ +I + D I++ D ++ +W + + + + DG
Sbjct: 97 MHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 156
Query: 170 DAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLK 229
S S DQT +W + EC R H +E ++ + +
Sbjct: 157 --LIASCSNDQTVRVWVV----ATKECKAELREHRHVVECISWAPESSYSSISEATGSET 210
Query: 230 IWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE- 288
S + S+ + + S+ L+TL GH + V + + +
Sbjct: 211 KKSGKPGPFLL---------SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKF 261
Query: 289 IITSSWDHTLKIWDAELGGMKSEIVGNKSF-FDVHYSPLSKLVITASADKQIRLYD 343
I++ + D TL++WD + + ++ F + + + V+T S D+ +++++
Sbjct: 262 ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 66.3 bits (160), Expect = 8e-13
Identities = 32/231 (13%), Positives = 74/231 (32%), Gaps = 52/231 (22%)
Query: 91 SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRG-EHKL 149
S + I + +++ + + I + D +V +W E K
Sbjct: 120 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 179
Query: 150 NIPGHGGPVKGVAWLYNDGKDAA-----------------FISVSTDQTAMIWEWKVESN 192
+ H V+ ++W + +S S D+T +W+ +
Sbjct: 180 ELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV----S 235
Query: 193 SIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTS 252
+ C+ GH+ + V + + D L++W
Sbjct: 236 TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK------------------ 277
Query: 253 KKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWD 302
++ + TL H+ ++++ + ++T S D T+K+W+
Sbjct: 278 -----------NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 54.4 bits (129), Expect = 7e-09
Identities = 35/197 (17%), Positives = 69/197 (35%), Gaps = 35/197 (17%)
Query: 197 IHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRK 256
+ GH + V + D +K+W +
Sbjct: 10 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE---------------------- 47
Query: 257 KEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIV--G 314
+ TLKGH +++ + + +++ S G +
Sbjct: 48 -------TGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 100
Query: 315 NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQ 374
+ + V P +++AS DK I++++ + TF+ H+EWV+ VR + D
Sbjct: 101 DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY---CVKTFTGHREWVRMVRPNQ-DGT 156
Query: 375 LFVSASFDNSVKLWDLR 391
L S S D +V++W +
Sbjct: 157 LIASCSNDQTVRVWVVA 173
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 92.9 bits (229), Expect = 1e-21
Identities = 34/291 (11%), Positives = 85/291 (29%), Gaps = 20/291 (6%)
Query: 115 HDDWVSAIDFHND--WILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYN----- 166
H + A+ + D +++ D + IW + IP V A+ +
Sbjct: 54 HLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVA 113
Query: 167 ---DGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG 223
+ ++ T + + ++ ++ + + T + + +
Sbjct: 114 CGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIET 173
Query: 224 WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYS-SASSRTPLITLKGHKEAISAVQ 282
+ + + T GH+ I+A+
Sbjct: 174 GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233
Query: 283 WTAV-DEIITSSWDHTLKI---WDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQ 338
+ + T S D T ++ + S V +S +L++ D
Sbjct: 234 FFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN 293
Query: 339 IRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389
++D + + H V + + D + S+D+ +K+W+
Sbjct: 294 CNVWDALKAD---RAGVLAGHDNRVSCLGVTD-DGMAVATGSWDSFLKIWN 340
Score = 44.7 bits (104), Expect = 1e-05
Identities = 35/220 (15%), Positives = 74/220 (33%), Gaps = 22/220 (10%)
Query: 187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSA------------- 233
V + RGH + + + + D L IW +
Sbjct: 38 DPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRS 97
Query: 234 ----DISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEI 289
+ + + L GH +S ++ ++I
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQI 157
Query: 290 ITSSWDHTLKIWDAELGG-MKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348
+TSS D T +WD E G + + +P ++L ++ + D +L+D +
Sbjct: 158 VTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM 217
Query: 349 GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW 388
+ TF+ H+ + ++ + P + F + S D + +L+
Sbjct: 218 ---CRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLF 253
Score = 33.6 bits (75), Expect = 0.037
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 352 VKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
+ T H + ++ W D +L VSAS D + +WD
Sbjct: 47 TRRTLRGHLAKIYAMHWGT-DSRLLVSASQDGKLIIWDS 84
Score = 31.2 bits (69), Expect = 0.20
Identities = 14/64 (21%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Query: 254 KRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEI 312
+ TL+GH I A+ W ++++S D L IWD+ I
Sbjct: 34 TNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI 93
Query: 313 VGNK 316
Sbjct: 94 PLRS 97
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 84.9 bits (208), Expect = 3e-19
Identities = 53/287 (18%), Positives = 112/287 (39%), Gaps = 19/287 (6%)
Query: 115 HDDWVSAIDFHNDWILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAF 173
V + + + I++G D+++ IW E K + GH G V + Y++
Sbjct: 14 TSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSV--LCLQYDERVIITG 71
Query: 174 ISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSA 233
S ST + + ++ + I + + A I
Sbjct: 72 SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLR 131
Query: 234 DI-----SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE 288
+ + ++ + S R + + S+ + TL GHK I+ +Q+
Sbjct: 132 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD-RL 190
Query: 289 IITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYD----- 343
+++ S D+T+++WD E G + G++ ++V + + D +I+++D
Sbjct: 191 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIV-SGAYDGKIKVWDLVAAL 249
Query: 344 -PKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389
P+ G + T H V +++ D VS+S D+++ +WD
Sbjct: 250 DPRAPAGTLCLRTLVEHSGRVFRLQF---DEFQIVSSSHDDTILIWD 293
Score = 55.2 bits (131), Expect = 4e-09
Identities = 57/260 (21%), Positives = 95/260 (36%), Gaps = 27/260 (10%)
Query: 145 GEHKLN-IPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH 203
G H L I KGV L D + +S D T IW+ N++EC + GH
Sbjct: 1 GRHSLQRIHCRSETSKGVYCLQYDDQ--KIVSGLRDNTIKIWDK----NTLECKRILTGH 54
Query: 204 ERGLETVTVSESRQ------------QFATGGWDCLLKIWSADISKERGDPSENGDEGTT 251
+ + E TG L + R +
Sbjct: 55 TGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKD 114
Query: 252 SKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSE 311
+ +S + T L GH+ A++ V + I+++S D T+K+W+
Sbjct: 115 RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD-DKYIVSASGDRTIKVWNTSTCEFVRT 173
Query: 312 IVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI 371
+ G+K +LV++ S+D IRL+D + + + VR
Sbjct: 174 LNGHKRGIA-CLQYRDRLVVSGSSDNTIRLWDIECGA------CLRVLEGHEELVRCIRF 226
Query: 372 DPQLFVSASFDNSVKLWDLR 391
D + VS ++D +K+WDL
Sbjct: 227 DNKRIVSGAYDGKIKVWDLV 246
Score = 36.7 bits (83), Expect = 0.003
Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Query: 95 VIDVEYLESTPTPSPLDCIL----HDDWVSAIDFHNDWILTGCYDHSVHIW 141
V D+ P+ C+ H V + F I++ +D ++ IW
Sbjct: 242 VWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 292
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 82.2 bits (201), Expect = 8e-18
Identities = 46/330 (13%), Positives = 102/330 (30%), Gaps = 57/330 (17%)
Query: 115 HDDWVSAIDFHND--WILTGCYDHSVHIW-------------------TRRGEHKLNIPG 153
H V + F ND ++ TGC + + ++ + + P
Sbjct: 61 HTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPS 119
Query: 154 HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVS 213
++ V + + A + I K+ + +
Sbjct: 120 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV 179
Query: 214 ESRQQFATGGWDCLLKIWSADISKERGDP-------------SENGDEGTTSKKRKKEYS 260
WD S +S E G + + D + +
Sbjct: 180 SGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL 239
Query: 261 SASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNKSF- 318
+ + GHK+++ +V +T + +++ S D ++K+W+ + KS+ S
Sbjct: 240 VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGT 299
Query: 319 ------------FDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSV 366
V + + +++ S D+ + +D K G + H+ V SV
Sbjct: 300 CEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWD--KKSGNPLL-MLQGHRNSVISV 356
Query: 367 RWSPI-----DPQLFVSASFDNSVKLWDLR 391
+ + +F + S D ++W +
Sbjct: 357 AVANGSSLGPEYNVFATGSGDCKARIWKYK 386
Score = 62.5 bits (150), Expect = 2e-11
Identities = 38/245 (15%), Positives = 77/245 (31%), Gaps = 28/245 (11%)
Query: 112 CILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDA 171
H+ + ++D+ + + G
Sbjct: 159 LQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGK 218
Query: 172 AFISVSTDQTAMIWEW---KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLL 228
+ S D+ +W+ + GH+ + +V + Q +G D +
Sbjct: 219 YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSV 278
Query: 229 KIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE 288
K+W+ + K + + +S T +T GHK+ + +V T DE
Sbjct: 279 KLWNLQ-----------------NANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE 321
Query: 289 -IITSSWDHTLKIWD-------AELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIR 340
I++ S D + WD L G ++ ++ P + T S D + R
Sbjct: 322 YILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKAR 381
Query: 341 LYDPK 345
++ K
Sbjct: 382 IWKYK 386
Score = 46.3 bits (108), Expect = 3e-06
Identities = 49/258 (18%), Positives = 86/258 (33%), Gaps = 39/258 (15%)
Query: 171 AAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKI 230
+ T+ +++ + +H H + V S + ATG + ++
Sbjct: 29 PDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQV 87
Query: 231 WSADISKERG---DPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-- 285
+ D S + S R+ + G A A
Sbjct: 88 YRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRI 147
Query: 286 ---------------------------VDEIITSSWDHTLKIWDAELGGMKSEIVGNKSF 318
D++++ S D T++IWD G +
Sbjct: 148 WDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGV 207
Query: 319 FDVHYSP-LSKLVITASADKQIRLYDPK----VKEGAIVKSTFSSHKEWVQSVRWSPIDP 373
V SP K + S D+ +R++D + V+ + + HK+ V SV ++ D
Sbjct: 208 TTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-DG 266
Query: 374 QLFVSASFDNSVKLWDLR 391
Q VS S D SVKLW+L+
Sbjct: 267 QSVVSGSLDRSVKLWNLQ 284
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 79.9 bits (195), Expect = 3e-17
Identities = 48/290 (16%), Positives = 109/290 (37%), Gaps = 29/290 (10%)
Query: 115 HDDWV-SAIDFHNDWILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYNDGKDAA 172
HDD V + + F + I++G D+++ +W G+ + GH G V
Sbjct: 15 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--------- 65
Query: 173 FISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWS 232
+ + N+ + + + ++ +G D L++W
Sbjct: 66 --RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 123
Query: 233 ADISKERGDPSENGDEGTTSKKRKKEY-----------SSASSRTPLITLKGHKEAISAV 281
+ + + + + + T L TL+GH + ++
Sbjct: 124 IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 183
Query: 282 QWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRL 341
Q+ +++ S D ++++WD E G + G++S ++++ +AD +++
Sbjct: 184 QFDG-IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT-SGMELKDNILVSGNADSTVKI 241
Query: 342 YDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
+D K + + H+ V + +++S D +VKLWDL+
Sbjct: 242 WDIKTGQCLQTLQGPNKHQSAVT---CLQFNKNFVITSSDDGTVKLWDLK 288
Score = 61.4 bits (147), Expect = 5e-11
Identities = 49/288 (17%), Positives = 97/288 (33%), Gaps = 51/288 (17%)
Query: 112 CILHDDWVSAIDFHNDWILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYNDGKD 170
H V + H +++G D ++ +W G+ + GH V+ V +
Sbjct: 93 LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--- 149
Query: 171 AAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKI 230
+S + D +W+ + C+H +GH ++ +G D +++
Sbjct: 150 --VVSGAYDFMVKVWDP----ETETCLHTLQGHTN--RVYSLQFDGIHVVSGSLDTSIRV 201
Query: 231 WSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEII 290
W + + TL GH+ S ++ + ++
Sbjct: 202 WDVETGN-----------------------------CIHTLTGHQSLTSGMELKD-NILV 231
Query: 291 TSSWDHTLKIWDAELGGMKSEIVGNK--SFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348
+ + D T+KIWD + G + G VIT+S D ++L+D K E
Sbjct: 232 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE 291
Query: 349 --GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNS----VKLWDL 390
+V V +R S + S + + + + D
Sbjct: 292 FIRNLVTLESGGSGGVVWRIRASN-TKLVCAVGSRNGTEETKLLVLDF 338
Score = 43.3 bits (100), Expect = 3e-05
Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 9/130 (6%)
Query: 261 SASSRTPLITLKGHKEAI-SAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFF 319
LKGH + + + +Q+ + I++ S D+TLK+W A G +VG
Sbjct: 2 RRGELKSPKVLKGHDDHVITCLQFCG-NRIVSGSDDNTLKVWSAVTGKCLRTLVG----- 55
Query: 320 DVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSA 379
H + + + A + +VR + + VS
Sbjct: 56 --HTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSG 113
Query: 380 SFDNSVKLWD 389
S D ++++WD
Sbjct: 114 SRDATLRVWD 123
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 78.7 bits (192), Expect = 8e-17
Identities = 29/293 (9%), Positives = 72/293 (24%), Gaps = 24/293 (8%)
Query: 115 HDDWVSAIDFHND--WILTGCYDHSVHIW------TRRGEHKLNIPGHGGPVKGVAWLYN 166
H + V A+ N + TG V +W + +L+ ++ L
Sbjct: 50 HGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLL-P 107
Query: 167 DGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC 226
DG ++ + E + + G
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 167
Query: 227 LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV 286
+ + +G ++ K + L+ ++ + +
Sbjct: 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQI 227
Query: 287 DEIITSSWDHTLKIWDAELGGMKSEIVG---------NKSFFDVHYSPLSKLVITASADK 337
+ L + + + ++ K ++ D
Sbjct: 228 FSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDN 287
Query: 338 QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
+ + GA + + V S S D + V+ S D ++++
Sbjct: 288 LLNAWR--TPYGASIFQS--KESSSVLSCDISV-DDKYIVTGSGDKKATVYEV 335
Score = 59.4 bits (142), Expect = 2e-10
Identities = 28/259 (10%), Positives = 74/259 (28%), Gaps = 10/259 (3%)
Query: 95 VIDVEYLESTPTPSPLDCILHDDWVSAIDFHND---------WILTGCYDHSVHIWTRRG 145
V D+ + + S LDC+ D+++ + D +D + +
Sbjct: 76 VWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKA 135
Query: 146 EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHER 205
E + P + D + + ++ + ++
Sbjct: 136 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDG 195
Query: 206 GLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSR 265
++ + L+ G+ + ++
Sbjct: 196 TKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNK 255
Query: 266 TPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYS 324
L H+ + ++++ + +++ D+ L W G + + S S
Sbjct: 256 PDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDIS 315
Query: 325 PLSKLVITASADKQIRLYD 343
K ++T S DK+ +Y+
Sbjct: 316 VDDKYIVTGSGDKKATVYE 334
Score = 47.9 bits (112), Expect = 9e-07
Identities = 37/274 (13%), Positives = 70/274 (25%), Gaps = 26/274 (9%)
Query: 135 DHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN-S 193
D + R ++N HG V V N + + +W+ N S
Sbjct: 31 DALIGPGIPRHARQINTLNHGEVVCAVTI-SNPTR---HVYTGGKGCVKVWDISHPGNKS 86
Query: 194 IECIHVCRGHERGLETVTVSESRQQFATGG----------------WDCLLKIWSADISK 237
C + + + + GG L +
Sbjct: 87 PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYA 146
Query: 238 ERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHT 297
P S + + A ++ T D+T
Sbjct: 147 LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNT 206
Query: 298 LKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS 357
++ WD G + F + Y P + + + + + K
Sbjct: 207 VRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD----KYQLH 262
Query: 358 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
H+ V S++++ + FVS DN + W
Sbjct: 263 LHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTP 295
Score = 37.1 bits (84), Expect = 0.003
Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 5/80 (6%)
Query: 312 IVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI 371
+G+K + H + ++ L P + A +T + H E V +V S
Sbjct: 6 AMGSKPAYSFHVTADGQMQPVPFPPDA--LIGPGIPRHARQINTLN-HGEVVCAVTISN- 61
Query: 372 DPQLFVSASFDNSVKLWDLR 391
+ + VK+WD+
Sbjct: 62 PTRHVYTGG-KGCVKVWDIS 80
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 69.2 bits (167), Expect = 9e-14
Identities = 34/289 (11%), Positives = 75/289 (25%), Gaps = 15/289 (5%)
Query: 115 HDDWVSAIDFHND--WILTGCYDHSVHIW-TRRGEHKLNIP-GHGGPVKGVAWLYND--- 167
H+ ++A+ D + + + ++ W G P H + G+
Sbjct: 11 HNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLF 70
Query: 168 ----GKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG 223
+ + +S
Sbjct: 71 TVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKL 130
Query: 224 WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQW 283
+ + S+ ++ + K ++ S I +++
Sbjct: 131 TEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNN 190
Query: 284 TAVDEIITSSWDHTLKIW--DAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRL 341
A S + EL S V +SP + + T S D + +
Sbjct: 191 GAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIV 250
Query: 342 YDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
++ + + V SV W + VSA D+++K W++
Sbjct: 251 WNMNKPSDHPIIIKGAHAMSSVNSVIWL--NETTIVSAGQDSNIKFWNV 297
Score = 43.1 bits (99), Expect = 3e-05
Identities = 22/191 (11%), Positives = 50/191 (26%), Gaps = 26/191 (13%)
Query: 112 CILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDA 171
+ S + ND + + +
Sbjct: 132 EVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNG 191
Query: 172 AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIW 231
AF+ + +I + + + H + V+ S + ATG D + +W
Sbjct: 192 AFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVW 251
Query: 232 SADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIIT 291
+ + S +I ++++V W I++
Sbjct: 252 NMN--------------------------KPSDHPIIIKGAHAMSSVNSVIWLNETTIVS 285
Query: 292 SSWDHTLKIWD 302
+ D +K W+
Sbjct: 286 AGQDSNIKFWN 296
Score = 42.7 bits (98), Expect = 5e-05
Identities = 7/40 (17%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Query: 352 VKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
+ H + + ++ S D + SA + + WD+
Sbjct: 4 IDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDIS 42
Score = 41.1 bits (94), Expect = 1e-04
Identities = 17/131 (12%), Positives = 36/131 (27%), Gaps = 28/131 (21%)
Query: 195 ECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKK 254
V GH + + ++ S + + + + W
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIS-------------------- 42
Query: 255 RKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG 314
+ + + H I+ ++ T+ ++ T SWD LK+ A G+ S
Sbjct: 43 --------TGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAV 94
Query: 315 NKSFFDVHYSP 325
Sbjct: 95 ANKLSSQPLGL 105
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 65.4 bits (157), Expect = 1e-12
Identities = 38/288 (13%), Positives = 82/288 (28%), Gaps = 27/288 (9%)
Query: 115 HDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFI 174
H+ ++A+ + +++G YD + W+ H+ H + + K +
Sbjct: 12 HNKGITALTVNP--LISGSYDGRIMEWSSSSMHQ----DHSNLIVSLDN----SKAQEYS 61
Query: 175 SVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSAD 234
S+S D T + + ++ +T + + D + +
Sbjct: 62 SISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNS 121
Query: 235 ISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA--------- 285
G + + + + S + +
Sbjct: 122 PGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGD 181
Query: 286 ----VDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRL 341
+ S + W + + LV T S D I +
Sbjct: 182 VMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFI 241
Query: 342 YDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389
Y VK + ++HK+ V ++ W P VS+ D +K W+
Sbjct: 242 YS--VKRPMKIIKALNAHKDGVNNLLWET--PSTLVSSGADACIKRWN 285
Score = 48.0 bits (112), Expect = 7e-07
Identities = 20/200 (10%), Positives = 56/200 (28%), Gaps = 35/200 (17%)
Query: 110 LDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIP---GHGGPVKGVAWLYN 166
+ + + SA+ +++ G + + + + +++ ++ +
Sbjct: 114 IKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPS 173
Query: 167 DGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHER----GLETVTVSESRQQFATG 222
+ AA + + +V+++ ATG
Sbjct: 174 ETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATG 233
Query: 223 GWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQ 282
D + I+S + L HK+ ++ +
Sbjct: 234 SLDTNIFIYSVK----------------------------RPMKIIKALNAHKDGVNNLL 265
Query: 283 WTAVDEIITSSWDHTLKIWD 302
W +++S D +K W+
Sbjct: 266 WETPSTLVSSGADACIKRWN 285
Score = 40.3 bits (92), Expect = 2e-04
Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 267 PLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELG 306
L T+ GH + I+A+ + +I+ S+D + W +
Sbjct: 5 VLKTISGHNKGITALTV---NPLISGSYDGRIMEWSSSSM 41
Score = 38.4 bits (87), Expect = 9e-04
Identities = 8/37 (21%), Positives = 17/37 (45%), Gaps = 5/37 (13%)
Query: 355 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
T S H + + ++ +P+ +S S+D + W
Sbjct: 8 TISGHNKGITALTVNPL-----ISGSYDGRIMEWSSS 39
Score = 32.2 bits (71), Expect = 0.089
Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 195 ECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSAD 234
E + GH +G+ +TV+ +G +D + WS+
Sbjct: 4 EVLKTISGHNKGITALTVN----PLISGSYDGRIMEWSSS 39
Score = 28.8 bits (62), Expect = 1.2
Identities = 30/245 (12%), Positives = 62/245 (25%), Gaps = 12/245 (4%)
Query: 151 IPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW----KVESNSIECIHVCRGHERG 206
I GH + + IS S D M W + SN I + +
Sbjct: 9 ISGHNKGITALTV-------NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQ-EY 60
Query: 207 LETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT 266
+ T ++ + N D+ + + +
Sbjct: 61 SSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLN 120
Query: 267 PLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPL 326
+ + AV + I +D + + S + + +
Sbjct: 121 SPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAG 180
Query: 327 SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 386
+ D Q R K S K + I+ L + S D ++
Sbjct: 181 DVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIF 240
Query: 387 LWDLR 391
++ ++
Sbjct: 241 IYSVK 245
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 63.0 bits (151), Expect = 1e-11
Identities = 43/314 (13%), Positives = 89/314 (28%), Gaps = 41/314 (13%)
Query: 115 HDDWVSAIDFHND--WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAA 172
H+ V+ +D+ D I+T D + ++WT +G + + +
Sbjct: 50 HNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKK 109
Query: 173 FISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWS 232
F S + I ++ E++ C H+ + + ++ + A G D +I+S
Sbjct: 110 FAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFS 169
Query: 233 ADISKERGDPSENGDEGTT-------------------SKKRKKEYSSASSRTPLITL-- 271
A I + P+ + S + L
Sbjct: 170 AYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLAD 229
Query: 272 ----------KGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFD- 320
+ AV + ++ + D ++ + K G
Sbjct: 230 ADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQ 289
Query: 321 VHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP---IDPQLFV 377
L+ + DK+ + S HK V + F
Sbjct: 290 SSQRGLTARERFQNLDKKASSEGSAAAGAGL----DSLHKNSVSQISVLSGGKAKCSQFC 345
Query: 378 SASFDNSVKLWDLR 391
+ D + +WD+R
Sbjct: 346 TTGMDGGMSIWDVR 359
Score = 54.9 bits (130), Expect = 6e-09
Identities = 10/70 (14%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Query: 320 DVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSA 379
++ + + ++ +Y+ + + H V V W+P D V+
Sbjct: 12 CHAWNKDRTQIAICPNNHEVHIYEKSGNK-WVQVHELKEHNGQVTGVDWAP-DSNRIVTC 69
Query: 380 SFDNSVKLWD 389
D + +W
Sbjct: 70 GTDRNAYVWT 79
Score = 45.6 bits (106), Expect = 6e-06
Identities = 26/196 (13%), Positives = 55/196 (28%), Gaps = 34/196 (17%)
Query: 203 HERGLETVT---VSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEY 259
H +E ++ ++ R Q A + + I+
Sbjct: 3 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKS------------------------- 37
Query: 260 SSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGN--- 315
+ + LK H ++ V W I+T D +W + K +V
Sbjct: 38 --GNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRIN 95
Query: 316 KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL 375
++ V ++P K S + I + + + V + L
Sbjct: 96 RAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVL 155
Query: 376 FVSASFDNSVKLWDLR 391
+ S D +++
Sbjct: 156 LAAGSCDFKCRIFSAY 171
Score = 42.9 bits (99), Expect = 4e-05
Identities = 14/76 (18%), Positives = 24/76 (31%), Gaps = 5/76 (6%)
Query: 157 PVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESR 216
P+ AW D + I+E N +H + H + V +
Sbjct: 9 PISCHAWN-KDRT--QIAICPNNHEVHIYEK--SGNKWVQVHELKEHNGQVTGVDWAPDS 63
Query: 217 QQFATGGWDCLLKIWS 232
+ T G D +W+
Sbjct: 64 NRIVTCGTDRNAYVWT 79
Score = 36.0 bits (81), Expect = 0.006
Identities = 22/149 (14%), Positives = 38/149 (25%), Gaps = 14/149 (9%)
Query: 91 SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLN 150
S ++ + + + + L + + G V KL+
Sbjct: 220 SHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLS 279
Query: 151 IPGHGGPVKGVAWLYNDGKDAA-----FISVSTDQTAMIWEWKVESNSIECIHVCRGHER 205
G K + ++ S A + NS+ I V G +
Sbjct: 280 FGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKA 339
Query: 206 GLETVTVSESRQQFATGGWDCLLKIWSAD 234
QF T G D + IW
Sbjct: 340 KC---------SQFCTTGMDGGMSIWDVR 359
Score = 34.1 bits (76), Expect = 0.026
Identities = 26/234 (11%), Positives = 51/234 (21%), Gaps = 42/234 (17%)
Query: 123 DFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTA 182
+ + GE G V GV + N + A S D T
Sbjct: 169 SAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWV---SHDSTV 225
Query: 183 MIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDP 242
+ + + + G DC +++ D
Sbjct: 226 CLADADKKMAVATLASETLPL-----LAVTFITESSLVAAGHDCFPVLFTYD-------- 272
Query: 243 SENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIW 301
S ++ G + + + D
Sbjct: 273 ---------------------SAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSE 311
Query: 302 DAELGGMKSEIVGNKSFFDVHYSPLSK----LVITASADKQIRLYDPKVKEGAI 351
+ G + + S + K T D + ++D + E A+
Sbjct: 312 GSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESAL 365
Score = 33.7 bits (75), Expect = 0.034
Identities = 5/38 (13%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
Query: 354 STFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
+ S E + W+ D ++ V +++
Sbjct: 1 AYHSFLVEPISCHAWNK-DRTQIAICPNNHEVHIYEKS 37
Score = 26.7 bits (57), Expect = 5.4
Identities = 9/63 (14%), Positives = 19/63 (30%), Gaps = 1/63 (1%)
Query: 134 YDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYND-GKDAAFISVSTDQTAMIWEWKVESN 192
D H V ++ L K + F + D IW+ + +
Sbjct: 304 LDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES 363
Query: 193 SIE 195
+++
Sbjct: 364 ALK 366
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 62.9 bits (151), Expect = 1e-11
Identities = 34/316 (10%), Positives = 85/316 (26%), Gaps = 46/316 (14%)
Query: 115 HDDWVSAIDFHND--WILTGCYDHSVHIWTRRGEHK----LNIPGHGGPVKGVAWLYNDG 168
D++S I +L +D S+ ++ + K L + P+ ++ N
Sbjct: 10 PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTD 69
Query: 169 KDAAFISVSTDQTAMIWE---------------WKVESNSIECIHVCRGHERGLETVTVS 213
+V + + + GL V
Sbjct: 70 LQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDP 129
Query: 214 ESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG 273
+ + D + + + + + + T++
Sbjct: 130 RNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEE 189
Query: 274 HKEAISAVQWTAV----DEIITSSWDHTLKIWDAELGGMKSEIVGNKSFF---------- 319
+ + SS D + + + G +F
Sbjct: 190 SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTN 249
Query: 320 ------DVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDP 373
+ +SP K + TA +D I ++ ++ +K+ +++ V V+ +
Sbjct: 250 LAYPVNSIEFSPRHKFLYTAGSDGIISCWN--LQTRKKIKNFAKFNEDSV--VKIAC-SD 304
Query: 374 QLFVSASFDNSVKLWD 389
+ A+ D++ K
Sbjct: 305 NILCLATSDDTFKTNA 320
Score = 44.5 bits (103), Expect = 1e-05
Identities = 6/37 (16%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 355 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
+ K+++ ++ P L + S+D S+ ++
Sbjct: 6 IEQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFD 41
Score = 42.1 bits (97), Expect = 7e-05
Identities = 9/67 (13%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
Query: 270 TLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVG----NKSFFDVHYS 324
+ K+ IS ++ ++ +SWD +L ++ ++ +++ ++
Sbjct: 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFI 65
Query: 325 PLSKLVI 331
+ L I
Sbjct: 66 DNTDLQI 72
Score = 38.7 bits (88), Expect = 9e-04
Identities = 16/260 (6%), Positives = 66/260 (25%), Gaps = 26/260 (10%)
Query: 112 CILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGK-- 169
+ + +D ++ +D + + R I
Sbjct: 98 NEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMD 157
Query: 170 --DAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCL 227
+ I + + + + I + + + + ++ +A D
Sbjct: 158 TNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR 217
Query: 228 LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD 287
+ + D + + S+ + + +++++++
Sbjct: 218 VAVEFFDDQGDDYNSSKR--------------FAFRCHRLNLKDTNLAYPVNSIEFSPRH 263
Query: 288 EIITS-SWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKV 346
+ + + D + W+ + V + ++ A++D +
Sbjct: 264 KFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNA--- 320
Query: 347 KEGAIVKSTFSSHKEWVQSV 366
+ T + + +
Sbjct: 321 ----AIDQTIELNASSIYII 336
Score = 38.7 bits (88), Expect = 0.001
Identities = 21/223 (9%), Positives = 59/223 (26%), Gaps = 26/223 (11%)
Query: 194 IECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDP----------- 242
++ + + + + + + + S+ WD L ++ DI + D
Sbjct: 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL 60
Query: 243 ---------------SENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD 287
+ G+ + + ++ + + + A
Sbjct: 61 CCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASW 120
Query: 288 EIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK 347
+ + D + S +I + Q++ + +
Sbjct: 121 DGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLC 180
Query: 348 EGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
E S K ++ V P + + + +S D V +
Sbjct: 181 EDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFF 223
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 60.6 bits (145), Expect = 8e-11
Identities = 33/308 (10%), Positives = 85/308 (27%), Gaps = 32/308 (10%)
Query: 115 HDDWVSAIDFHNDWILTGCYDHSVHIW-------TRRGEHKLNIPGHGGPVKGVAWL--- 164
HD + ++ N + ++ D + +W + + H + V L
Sbjct: 13 HDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAI 72
Query: 165 -YNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG 223
+ + + S + + E + + I + + A+
Sbjct: 73 ERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASND 132
Query: 224 WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQW 283
++ + D+ + ++ + + + + + ++V
Sbjct: 133 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDI 192
Query: 284 TAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSF-------FDVHYSPLSKLVITASAD 336
+ I T + T++I + S V +SP L+ A
Sbjct: 193 SERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDS 252
Query: 337 KQIRLYDP-------------KVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN 383
+ +H WV S+ ++ SA +D
Sbjct: 253 NSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGET-LCSAGWDG 311
Query: 384 SVKLWDLR 391
++ WD++
Sbjct: 312 KLRFWDVK 319
Score = 51.0 bits (120), Expect = 1e-07
Identities = 19/122 (15%), Positives = 37/122 (30%), Gaps = 33/122 (27%)
Query: 270 TLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKL 329
K H I +V ++ S D LK+WD +L ++ + S F
Sbjct: 9 AGKAHDADIFSVSACN-SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF---------- 57
Query: 330 VITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389
V + H + +Q++ + L + SF + +
Sbjct: 58 ----------------------VHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYR 95
Query: 390 LR 391
+
Sbjct: 96 IT 97
Score = 41.4 bits (95), Expect = 1e-04
Identities = 35/319 (10%), Positives = 78/319 (24%), Gaps = 40/319 (12%)
Query: 101 LESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGE-----------HKL 149
S L + + F + T + + + E L
Sbjct: 54 YSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLL 113
Query: 150 NIPGHGGPVKGVAWLYNDGKDAA--FISVSTDQTAMIWE-WKVESNSIECIHVCRGHERG 206
+ + W ++ + + ++ T IW+ S
Sbjct: 114 DSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLEL 173
Query: 207 LETVTVSESRQQF------------ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKK 254
TV + QF ATG + ++I + +
Sbjct: 174 QGTVESPMTPSQFATSVDISERGLIATGFNNGTVQIS---ELSTLRPLYNFESQHSMINN 230
Query: 255 RKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG 314
S S + H ++ + E +L + E
Sbjct: 231 SNSIRSVKFSPQGSLLAIAHDS--NSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAH 288
Query: 315 NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQ----SVRWSP 370
+ + ++ + + +A D ++R +D VK + T + H + ++ +
Sbjct: 289 SSWVMSLSFNDSGETLCSAGWDGKLRFWD--VKTKERIT-TLNMHCDDIEIEEDILAVDE 345
Query: 371 IDPQLFVSASFDNSVKLWD 389
VK
Sbjct: 346 -HGDSLAEPGVF-DVKFLK 362
Score = 41.0 bits (94), Expect = 2e-04
Identities = 27/256 (10%), Positives = 67/256 (26%), Gaps = 63/256 (24%)
Query: 108 SPLDCILHDDWVSAIDFHNDWIL-TGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYN 166
+ + + +++D ++ TG + +V I L + +
Sbjct: 176 TVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIR 235
Query: 167 ----------------DGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETV 210
T+ I V ++S + H + ++
Sbjct: 236 SVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSL 295
Query: 211 TVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT 270
+ ++S + + GWD L+ W ++ + T
Sbjct: 296 SFNDSGETLCSAGWDGKLRFWDVK-----------------------------TKERITT 326
Query: 271 LKGHKEAIS----AVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPL 326
L H + I + + + +K K + + L
Sbjct: 327 LNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK-------------KGWRSGMGADL 373
Query: 327 SKLVITASADKQIRLY 342
++ + D+ IR +
Sbjct: 374 NESLCCVCLDRSIRWF 389
Score = 33.7 bits (75), Expect = 0.034
Identities = 18/280 (6%), Positives = 49/280 (17%), Gaps = 40/280 (14%)
Query: 115 HDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFI 174
FH + + + V +
Sbjct: 144 VKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDI----SERGLIA 199
Query: 175 SVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSAD 234
+ + T I E A
Sbjct: 200 TGFNNGTVQISELSTLRPLYNFESQHSMINN-----------SNSIRSVKFSPQGSLLAI 248
Query: 235 ISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSS 293
E ++ S + H + ++ + + + ++
Sbjct: 249 AHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG 308
Query: 294 WDHTLKIWDAELGGMKSEIVGNKS-----FFDVHYSPLSKLVITASADKQIRLYDPKVKE 348
WD L+ WD + + + + + + ++ +
Sbjct: 309 WDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFD-VKFLKKGWRS 367
Query: 349 GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW 388
G + D S++ +
Sbjct: 368 GMGADLN------------------ESLCCVCLDRSIRWF 389
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 58.8 bits (140), Expect = 3e-10
Identities = 47/314 (14%), Positives = 95/314 (30%), Gaps = 50/314 (15%)
Query: 115 HDDWV-SAIDFHNDWILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYNDGKDAA 172
H V + + F +++++TG D + ++ + + L + GH G V + + +
Sbjct: 11 HMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG----- 65
Query: 173 FISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWS 232
I VS + W ++ + + ++ + TG D L +W
Sbjct: 66 -ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 124
Query: 233 ADISKERGDPSENGDEGTTSKKRKKEYSSASS---------------------------- 264
D E D ++
Sbjct: 125 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLI 184
Query: 265 -------RTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKS 317
+ I S + I++S D T++IWD E G + + G+ +
Sbjct: 185 VWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTA 244
Query: 318 FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFV 377
+ LV A+ FS H + ++ + + V
Sbjct: 245 LVGLLRLSDKFLVSAAADGSIRGWDANDYSR------KFSYHHTNLSAITTFYVSDNILV 298
Query: 378 SASFDNSVKLWDLR 391
S S +N +++LR
Sbjct: 299 SGS-ENQFNIYNLR 311
Score = 58.0 bits (138), Expect = 5e-10
Identities = 38/305 (12%), Positives = 87/305 (28%), Gaps = 33/305 (10%)
Query: 115 HDDWVSAIDFHND-WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAF 173
HD V A+ + + +++G D +V +W + ++ +
Sbjct: 52 HDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYI 111
Query: 174 ISVSTDQTAMIWEWKVESNSIE-----------------CIHVCRGHERGLETVTVSESR 216
++ S D T +W+ ES+ + V TVS
Sbjct: 112 VTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHG 171
Query: 217 QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYS-----------SASSR 265
+G +D L +W K S + D ++ +
Sbjct: 172 NIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE 231
Query: 266 TPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSP 325
+ D+ + S+ + + + +
Sbjct: 232 NGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFY 291
Query: 326 LSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSV 385
+S ++ + ++ Q +Y+ ++ G +V + + + SV + L + D
Sbjct: 292 VSDNILVSGSENQFNIYN--LRSGKLVHANILKDADQIWSVNFKG--KTLVAAVEKDGQS 347
Query: 386 KLWDL 390
L L
Sbjct: 348 FLEIL 352
Score = 37.6 bits (85), Expect = 0.002
Identities = 12/126 (9%), Positives = 31/126 (24%), Gaps = 9/126 (7%)
Query: 112 CILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDA 171
+ + + +D L ++ H + + Y
Sbjct: 238 TLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDN-- 295
Query: 172 AFISVSTDQTAMIWEWKVESNSIECIHV-CRGHERGLETVTVSESRQQFATGGWDCLLKI 230
+ ++ I+ + S + +H + +V + A D +
Sbjct: 296 -ILVSGSENQFNIYNLR----SGKLVHANILKDADQIWSVNFKG-KTLVAAVEKDGQSFL 349
Query: 231 WSADIS 236
D S
Sbjct: 350 EILDFS 355
Score = 34.5 bits (77), Expect = 0.019
Identities = 5/39 (12%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 353 KSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
++T H V + + ++ + D ++++D
Sbjct: 5 RTTLRGHMTSVITC-LQF-EDNYVITGADDKMIRVYDSI 41
Score = 34.1 bits (76), Expect = 0.023
Identities = 17/195 (8%), Positives = 61/195 (31%), Gaps = 4/195 (2%)
Query: 112 CILHDDWVSAIDFHNDWILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYNDGKD 170
H V + H + +++G YD+++ +W + + + GH + + + +
Sbjct: 157 LRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRC 216
Query: 171 AAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKI 230
+ +T + + ++ + + + + + + +
Sbjct: 217 ISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRK 276
Query: 231 WSADISKERGDPSENGDEG---TTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD 287
+S + + + + S+ + Y+ S + + + I +V +
Sbjct: 277 FSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT 336
Query: 288 EIITSSWDHTLKIWD 302
+ D +
Sbjct: 337 LVAAVEKDGQSFLEI 351
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 56.8 bits (135), Expect = 1e-09
Identities = 35/290 (12%), Positives = 70/290 (24%), Gaps = 40/290 (13%)
Query: 115 HDDWVSAIDFHND----WILTGCYDHSV---------HIWTRRGEHKLNIPGHGGPVKGV 161
V+ + F ++ +G V + K GP+ +
Sbjct: 62 GSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDI 121
Query: 162 AWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFAT 221
+W +G+ + D + W + V +R + T
Sbjct: 122 SW-DFEGRRLCVVGEGRDNFGVFISWD---SGNSLGEVSGHSQRINACHLKQSRPMRSMT 177
Query: 222 GGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAV 281
G D + + K + +G+ S +
Sbjct: 178 VGDDGSVVFYQGPPFKFSASDRTHHKQGSF------VRDVEFSPDSGEFVITVGSDRKIS 231
Query: 282 QWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRL 341
+ + + S+ T AD IR+
Sbjct: 232 CFDGKSGEFLKYIEDDQEPVQ--------------GGIFALSWLDSQKFATVGADATIRV 277
Query: 342 YDPKVKEGAIVKS-TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
+D V V+ T + Q V +S S D ++ ++L
Sbjct: 278 WD--VTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 39.1 bits (89), Expect = 7e-04
Identities = 14/73 (19%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Query: 321 VHYSPLSKLVITASADK-QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI-DPQLFVS 378
+ Y P + + +R D + V V +V++SPI Q S
Sbjct: 23 LSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCS 82
Query: 379 ASFDNSVKLWDLR 391
V +W
Sbjct: 83 GDESGKVIVWGWT 95
Score = 35.3 bits (79), Expect = 0.010
Identities = 32/298 (10%), Positives = 68/298 (22%), Gaps = 28/298 (9%)
Query: 101 LESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDH----SVHIWTRRGEHKLNIPGH 154
L+ P P ++ + + + + I C + + + GH
Sbjct: 5 LKEIIPPQPST---QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGH 61
Query: 155 GG-PVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVS 213
G V V + S ++W W + S + + L
Sbjct: 62 GSSVVTTVKF-SPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISD 120
Query: 214 ESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG 273
+ G + D G S ++
Sbjct: 121 ---ISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRIN-------------- 163
Query: 274 HKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITA 333
+ ++ S ++ DV +SP S +
Sbjct: 164 ACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVIT 223
Query: 334 SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
+ + S +D Q F + D ++++WD+
Sbjct: 224 VGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVT 281
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 55.2 bits (132), Expect = 5e-09
Identities = 14/103 (13%), Positives = 30/103 (29%), Gaps = 2/103 (1%)
Query: 289 IITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348
+T + + D +K+ + + S + + D ++ + D +KE
Sbjct: 35 SVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKE 94
Query: 349 GAIVKS--TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389
V S + S D A + + D
Sbjct: 95 PTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMD 137
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 53.6 bits (127), Expect = 1e-08
Identities = 30/309 (9%), Positives = 70/309 (22%), Gaps = 21/309 (6%)
Query: 95 VIDVEYLESTPTPSPLDCILHDDWVSAIDFHND---WILTGCYDHSVHIW----TRRGEH 147
V+DV + + D + + ++ + H
Sbjct: 22 VVDVASDTVYKSCV----MPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH 77
Query: 148 KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGL 207
G + + + + + V+ +E G E
Sbjct: 78 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP 137
Query: 208 ETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTP 267
+ D L + DI K + +K YS+
Sbjct: 138 VRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYF 197
Query: 268 LITLKGHKEAISAVQWTAVD----EIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHY 323
E + T+ + D + G ++ + +
Sbjct: 198 WPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTG 257
Query: 324 SPLSKLVITAS-ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD 382
K ++ YD +K+ ++K+ H V +
Sbjct: 258 LRSPKDPNQIYGVLNRLAKYD--LKQRKLIKAANLDH--TYYCVAFDK-KGDKLYLGGTF 312
Query: 383 NSVKLWDLR 391
N + +++
Sbjct: 313 NDLAVFNPD 321
Score = 46.3 bits (108), Expect = 3e-06
Identities = 22/264 (8%), Positives = 58/264 (21%), Gaps = 52/264 (19%)
Query: 82 TSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIW 141
T L + ++V P+ V + +D L +
Sbjct: 110 TQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMD 169
Query: 142 TRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR 201
+ G++ + +P KG + W + + ++
Sbjct: 170 VKTGKYTVALPLRNWNRKGYS---------------APDVLYFWPHQSPRHEFSMLYTI- 213
Query: 202 GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSS 261
+ +Q AT
Sbjct: 214 --------ARFKDDKQDPATADLLYGYLSVDL---------------------------- 237
Query: 262 ASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDV 321
+ +T E + D + L +D + + + +++ V
Sbjct: 238 KTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTYYCV 297
Query: 322 HYSPLSKLVITASADKQIRLYDPK 345
+ + + +++P
Sbjct: 298 AFDKKGDKLYLGGTFNDLAVFNPD 321
Score = 42.8 bits (99), Expect = 5e-05
Identities = 9/67 (13%), Positives = 21/67 (31%), Gaps = 2/67 (2%)
Query: 324 SPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN 383
+ +I + + + D + KS K + +P + +V +
Sbjct: 5 KAGHEYMIVTNYPNNLHVVDVA--SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYG 62
Query: 384 SVKLWDL 390
+ DL
Sbjct: 63 DIYGIDL 69
Score = 38.6 bits (88), Expect = 9e-04
Identities = 13/107 (12%), Positives = 33/107 (30%), Gaps = 6/107 (5%)
Query: 289 IITSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSK-LVITASADKQIRLYDP- 344
+I +++ + L + D + V +P ++ + + I D
Sbjct: 11 MIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLD 70
Query: 345 --KVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389
K A + S + S SP +++ + + +
Sbjct: 71 TCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY 117
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 53.4 bits (126), Expect = 2e-08
Identities = 25/278 (8%), Positives = 68/278 (24%), Gaps = 26/278 (9%)
Query: 115 HDDWVSAIDFHND--WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAA 172
H + + +G +V IW + V + D +
Sbjct: 57 HSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKR 116
Query: 173 FISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWS 232
+V + + ++ + + S + + + +
Sbjct: 117 IAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEG 176
Query: 233 ADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITS 292
+ + +++ + +
Sbjct: 177 PPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGD---------------GTIVLYNGVDG 221
Query: 293 SWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIV 352
+ + + F + +SP + +ASADK I++++ V +
Sbjct: 222 TKTGVFEDDSLKNVAHSGS------VFGLTWSPDGTKIASASADKTIKIWN--VATLKVE 273
Query: 353 KSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
K+ + Q + Q VS S + + +
Sbjct: 274 KTIPVGTRIEDQQLGIIW-TKQALVSISANGFINFVNP 310
Score = 38.7 bits (88), Expect = 8e-04
Identities = 8/68 (11%), Positives = 20/68 (29%), Gaps = 5/68 (7%)
Query: 321 VHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS 380
+ +P + + + V + ++ H + SP S
Sbjct: 23 LGNTPAGDKIQYCN-GTSVYTVP--VGSLTDTE-IYTEHSHQTTVAKTSP-SGYYCASGD 77
Query: 381 FDNSVKLW 388
+V++W
Sbjct: 78 VHGNVRIW 85
Score = 35.6 bits (80), Expect = 0.007
Identities = 9/79 (11%), Positives = 20/79 (25%), Gaps = 3/79 (3%)
Query: 109 PLDCILHDDWVSAIDFHNDWILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYND 167
+ I + D ++ IW + + IP +
Sbjct: 233 KNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWT 292
Query: 168 GKDAAFISVSTDQTAMIWE 186
+ A +S+S +
Sbjct: 293 KQ--ALVSISANGFINFVN 309
Score = 35.3 bits (79), Expect = 0.009
Identities = 18/195 (9%), Positives = 42/195 (21%), Gaps = 31/195 (15%)
Query: 112 CILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDA 171
+ I + + K H V V + + A
Sbjct: 146 ARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFA 205
Query: 172 AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIW 231
+ T + + H + +T S + A+ D +KIW
Sbjct: 206 STGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIW 265
Query: 232 SADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE--I 289
+ ++ T+ + +
Sbjct: 266 NV-----------------------------ATLKVEKTIPVGTRIEDQQLGIIWTKQAL 296
Query: 290 ITSSWDHTLKIWDAE 304
++ S + + + E
Sbjct: 297 VSISANGFINFVNPE 311
Score = 34.1 bits (76), Expect = 0.023
Identities = 31/245 (12%), Positives = 55/245 (22%), Gaps = 27/245 (11%)
Query: 170 DAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLK 229
I + S+ + H S S A+G ++
Sbjct: 28 AGDKIQYCNGTSVYTVPVG----SLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVR 83
Query: 230 IWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE- 288
IW + + G S + + + + +
Sbjct: 84 IWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLT 143
Query: 289 -------------------IITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKL 329
I S + + K V Y+P L
Sbjct: 144 GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSL 203
Query: 330 VITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI---DPQLFVSASFDNSVK 386
+ D I LY+ V S + D SAS D ++K
Sbjct: 204 FASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIK 263
Query: 387 LWDLR 391
+W++
Sbjct: 264 IWNVA 268
Score = 27.6 bits (59), Expect = 2.9
Identities = 9/92 (9%), Positives = 21/92 (22%), Gaps = 2/92 (2%)
Query: 280 AVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSF-FDVHYSPLSKLVITASADKQ 338
+ T + I ++ + SP +
Sbjct: 22 VLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGN 81
Query: 339 IRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP 370
+R++D + T V+ + W
Sbjct: 82 VRIWDTTQTTHILKT-TIPVFSGPVKDISWDS 112
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 51.8 bits (122), Expect = 6e-08
Identities = 25/306 (8%), Positives = 54/306 (17%), Gaps = 26/306 (8%)
Query: 90 ISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKL 149
I D + T + V A+ + + I T E
Sbjct: 59 IHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK 118
Query: 150 ---NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW--EWKVESNSIECIHVCRGHE 204
+ N A + +T V I
Sbjct: 119 PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTEN 178
Query: 205 RGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS 264
+ + L + +
Sbjct: 179 SHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPR 238
Query: 265 RTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYS 324
+ + + L+ + +
Sbjct: 239 SMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLES-------------SILIYSVPVHG 285
Query: 325 PLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNS 384
+ A + YD K ++ + K + +R S D + + D
Sbjct: 286 EFAAYYQGAPEKGVLLKYDVKTRK-------VTEVKNNLTDLRLSA-DRKTVMVRKDDGK 337
Query: 385 VKLWDL 390
+ + L
Sbjct: 338 IYTFPL 343
Score = 39.8 bits (91), Expect = 3e-04
Identities = 23/245 (9%), Positives = 51/245 (20%), Gaps = 32/245 (13%)
Query: 108 SPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYND 167
+ + +++ G ++H++ G D
Sbjct: 131 TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE---NSHDYAPAFD 187
Query: 168 GKDAAFISVSTDQTAMIWE---WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW 224
+S + + V + G +
Sbjct: 188 ADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEY 247
Query: 225 DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT 284
D K+ +I L+ S
Sbjct: 248 DLN----------------------DMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHG 285
Query: 285 AVDEII-TSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYD 343
+ L +D + +E+ N + D+ S K V+ D +I +
Sbjct: 286 EFAAYYQGAPEKGVLLKYDVK-TRKVTEVKNNLT--DLRLSADRKTVMVRKDDGKIYTFP 342
Query: 344 PKVKE 348
+ E
Sbjct: 343 LEKPE 347
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 49.2 bits (116), Expect = 5e-07
Identities = 14/103 (13%), Positives = 28/103 (27%), Gaps = 2/103 (1%)
Query: 289 IITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348
+T + + D + + I + S + ++ D +I + D KE
Sbjct: 35 SVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKE 94
Query: 349 GAIVKS--TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389
V + S D A + + D
Sbjct: 95 PTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMD 137
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 41.3 bits (95), Expect = 1e-04
Identities = 24/283 (8%), Positives = 66/283 (23%), Gaps = 16/283 (5%)
Query: 95 VIDVEYLESTPTPSPLDCILHDDWVSAIDFHND--WILTGCYDHSVHIWTRRGEHKLNIP 152
ID+ E+ + D + + + +
Sbjct: 60 KIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVAL 119
Query: 153 GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMI----WEWKVESNSIECIHVCRGHERGLE 208
+ + + ++ + D + + ++ + + E
Sbjct: 120 YDAETLS-RRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAE 178
Query: 209 TVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPL 268
T + + ++ K+ + A +
Sbjct: 179 TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI 238
Query: 269 ITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSK 328
+ + A++ + A + L+ +D E + S++ V+ S
Sbjct: 239 MDVFYFSTAVNPAKTRAFG------AYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGS 292
Query: 329 LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI 371
V A + YD + E K S+ +
Sbjct: 293 TVWLGGALGDLAAYDAETLE---KKGQVDLPGNASMSLASVRL 332
Score = 39.8 bits (91), Expect = 4e-04
Identities = 8/65 (12%), Positives = 23/65 (35%), Gaps = 3/65 (4%)
Query: 328 KLVITASADKQIRLYDPKVKEGAIVKS-TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 386
++ + ++ + D + + A+ K T + +P + + + S+
Sbjct: 2 DYILAPARPDKLVVIDTE--KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLV 59
Query: 387 LWDLR 391
DL
Sbjct: 60 KIDLV 64
Score = 34.0 bits (76), Expect = 0.025
Identities = 16/108 (14%), Positives = 29/108 (26%), Gaps = 6/108 (5%)
Query: 289 IITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLS----KLVITASADKQIRLYDP 344
I+ + L + D E + I + ++ T + + + D
Sbjct: 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63
Query: 345 KVKE--GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
E G I ST + + SP L + S
Sbjct: 64 VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFE 111
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 38.6 bits (88), Expect = 8e-04
Identities = 24/218 (11%), Positives = 44/218 (20%), Gaps = 19/218 (8%)
Query: 104 TPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNI----PGHGGPVK 159
+ + D D C D S+ E I H
Sbjct: 136 LEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEF 195
Query: 160 GVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQF 219
+ K + + + S + + Q
Sbjct: 196 LINHPAYSQKAGRLVWPTYTGKIHQIDL--SSGDAKFLPAVEALTEAERADGWRPGGWQQ 253
Query: 220 ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAIS 279
+R + A + L + I
Sbjct: 254 VAYHRALDRIYLL---VDQRDEWRHKTASRFVVVL------DAKTGERLAKFEMGH-EID 303
Query: 280 AVQWTAVDE---IITSSWDHTLKIWDAELGGMKSEIVG 314
++ + ++ S+ D TL I DAE G +
Sbjct: 304 SINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ 341
Score = 38.2 bits (87), Expect = 0.001
Identities = 29/283 (10%), Positives = 67/283 (23%), Gaps = 20/283 (7%)
Query: 118 WVSAIDFHNDWILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAW------LYNDGKD 170
+++ I G V ++ +I P V L DGK
Sbjct: 60 FIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKT 119
Query: 171 AAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKI 230
F S + + + + + + F D L
Sbjct: 120 LLFYQFSPAPAVGVVDLE----GKAFKRMLDVPDC---YHIFPTAPDTFFMHCRDGSLAK 172
Query: 231 WSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEII 290
+ S + + K + +
Sbjct: 173 VAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLP 232
Query: 291 TSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHY-SPLSKLVITASADKQIRLYDPKVKEG 349
+ D G ++ +++ ++ +A + + + D K E
Sbjct: 233 AVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE- 291
Query: 350 AIVKSTFSSHKEWVQSVRWSP-IDPQLFVSASFDNSVKLWDLR 391
+ + S+ S P L+ ++ D ++ + D
Sbjct: 292 ---RLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAE 331
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 38.3 bits (87), Expect = 0.001
Identities = 23/304 (7%), Positives = 59/304 (19%), Gaps = 13/304 (4%)
Query: 91 SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHND---WILTGCYDHSVHIWTRRGEH 147
I V L + + V + D + + V + +
Sbjct: 11 PESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDD 70
Query: 148 KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD-QTAMIWEWKVESNSIECIHVCRGHERG 206
A IS Q + + + S+ +
Sbjct: 71 GALT---------FAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVV 121
Query: 207 LETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT 266
+ + L S++G A R
Sbjct: 122 DVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRH 181
Query: 267 PLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPL 326
+ ++VD ++ ++ +
Sbjct: 182 MVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDG 241
Query: 327 SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 386
L I ++ + K F + + L + + +
Sbjct: 242 RHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHIS 301
Query: 387 LWDL 390
++++
Sbjct: 302 VYEI 305
Score = 38.3 bits (87), Expect = 0.001
Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 329 LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW 388
+ I + +QI +++ EGA+ + VQ + SP L+V + V +
Sbjct: 6 VYIASPESQQIHVWNLN-HEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAY 64
Query: 389 DL 390
+
Sbjct: 65 RI 66
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 37.9 bits (86), Expect = 0.001
Identities = 25/273 (9%), Positives = 62/273 (22%), Gaps = 17/273 (6%)
Query: 131 TGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV 189
++ + + IP P+ G DG +++ + I +
Sbjct: 7 ANSESDNISVIDVTSNKVTATIPVGSNPM-GAVI-SPDGT-KVYVANAHSNDVSIIDTAT 63
Query: 190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEG 249
+ + A+ + + + S G
Sbjct: 64 NNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLAL 123
Query: 250 TTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITS-----------SWDHTL 298
+ K+ ++ +I + + I +
Sbjct: 124 SPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSIS 183
Query: 299 KIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS 358
I + + V +K +T + I
Sbjct: 184 VIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITA-RIPV 242
Query: 359 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
+ +P +++V+ SF N+V + D
Sbjct: 243 GP-DPAGIAVTPDGKKVYVALSFCNTVSVIDTA 274
Score = 36.4 bits (82), Expect = 0.004
Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 4/60 (6%)
Query: 331 ITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
I S I + D + V +T SP +++V+ + N V + D
Sbjct: 6 IANSESDNISVIDVTSNK---VTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDT 61
Score = 36.0 bits (81), Expect = 0.006
Identities = 8/57 (14%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Query: 290 ITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSP-LSKLVITASADKQIRLYDPK 345
I +S + + D + + I + SP +K+ + + + + D
Sbjct: 6 IANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTA 62
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 37.7 bits (86), Expect = 0.002
Identities = 17/284 (5%), Positives = 58/284 (20%), Gaps = 26/284 (9%)
Query: 118 WVSAIDFHNDWILTGCYDHSVHIW-TRRGEHKLNIPGHGGP---VKGVAWLYNDGKDAAF 173
+ G V ++ +I P V + + +A
Sbjct: 78 DFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSAC 137
Query: 174 ISVSTDQTAMIWEWKVESNSIECIHVCRG-----HERGLETVTVSESRQQFATGGWDCLL 228
+ ++ V S + + S A+
Sbjct: 138 LLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAA--A 195
Query: 229 KIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE 288
+ + + + + + +S +
Sbjct: 196 PAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAG----------ATM 245
Query: 289 IITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348
+ + + D + K+ + + +A +
Sbjct: 246 KAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTAS--V 303
Query: 349 GAIVKSTFSSHKEWVQSVRWSPID-PQLFVSASFDNSVKLWDLR 391
G S+ ++ + + +++ + ++D
Sbjct: 304 GQTSGPI--SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAA 345
Score = 31.9 bits (71), Expect = 0.13
Identities = 17/219 (7%), Positives = 38/219 (17%), Gaps = 28/219 (12%)
Query: 95 VIDVEYLESTPTPSPLDC--ILHDDWVSAIDFHND--WILTGCYDHSVHIWTRRGEHKLN 150
+ V C I + + +
Sbjct: 150 GLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTG- 208
Query: 151 IPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETV 210
+ Y + I + + + G+E G +
Sbjct: 209 --AQNCSSQAAQANY----PGMLVWAVASS---ILQGDIPAAGATMKAAIDGNESGRKAD 259
Query: 211 TVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT 270
+ Q + + + +AS
Sbjct: 260 NFRSAGFQMVAKLKNTDGIMILTV----------EHSRSCLAAAENTSSVTASVGQTSGP 309
Query: 271 LKGHKEAISAVQWTAVDE---IITSSWDHTLKIWDAELG 306
+ + A+ S+ L I+DA
Sbjct: 310 I-SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 36.5 bits (83), Expect = 0.005
Identities = 19/146 (13%), Positives = 36/146 (24%), Gaps = 22/146 (15%)
Query: 262 ASSRTPLITLKGHKE---AIS------AVQWTAVDEIITSSWDHTLKIWDAELGGMKSEI 312
A ++ L + G AI+ V T + ++I D EI
Sbjct: 5 ADAKKLLGQIDGGFGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHAGEI 64
Query: 313 VGNK----SFFDVHYSPLSK---LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQS 365
V + + S + A+ + V S +
Sbjct: 65 VIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVI-----DAVSKKMLSEIDTAAC 119
Query: 366 VRWSPIDPQLFVSASFDN-SVKLWDL 390
V P F + ++ +
Sbjct: 120 VLAYPAGDDRFTALCESGKALTVTLD 145
>d1dqaa1 d.58.20.1 (A:587-703) NAD-binding domain of HMG-CoA
reductase {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 26.6 bits (59), Expect = 2.4
Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 5/65 (7%)
Query: 264 SRTPLITLKGHKEAISAVQWTAVDE---IITSSWDHTLKIWDAELGGMKSEIVGNKSFFD 320
+R P++ L ++ W E +I ++D T + A L + + I G +
Sbjct: 3 TRGPVVRLPRACDSAEVKAWLETSEGFAVIKEAFDSTSRF--ARLQKLHTSIAGRNLYIR 60
Query: 321 VHYSP 325
Sbjct: 61 FQSRS 65
>d1p32a_ d.25.1.1 (A:) Acidic mitochondrial matrix protein p32
{Human (Homo sapiens) [TaxId: 9606]}
Length = 209
Score = 26.4 bits (58), Expect = 5.3
Identities = 8/38 (21%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 56 EDSNEDNYKDIQFDFLIAGELLRTSVTSFLESKGISSE 93
E +D + D L L + FL +G+ +
Sbjct: 143 ESEWKDTNYTLNTDSL--DWALYDHLMDFLADRGVDNT 178
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.131 0.401
Gapped
Lambda K H
0.267 0.0373 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,479,997
Number of extensions: 67064
Number of successful extensions: 463
Number of sequences better than 10.0: 1
Number of HSP's gapped: 254
Number of HSP's successfully gapped: 133
Length of query: 391
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 304
Effective length of database: 1,213,086
Effective search space: 368778144
Effective search space used: 368778144
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 54 (25.5 bits)