Query psy2108
Match_columns 345
No_of_seqs 338 out of 1569
Neff 6.3
Searched_HMMs 46136
Date Sat Aug 17 00:27:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2108.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2108hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR03230 lipo_lipase lipoprot 100.0 1.8E-78 3.8E-83 607.2 27.9 318 10-331 6-365 (442)
2 PF00151 Lipase: Lipase; Inte 100.0 2E-71 4.3E-76 540.9 15.0 264 11-275 38-331 (331)
3 cd00707 Pancreat_lipase_like P 100.0 3.7E-65 8.1E-70 485.2 23.6 257 10-271 2-275 (275)
4 PRK00870 haloalkane dehalogena 99.5 4.2E-14 9.2E-19 134.5 12.8 104 35-146 45-152 (302)
5 PRK11126 2-succinyl-6-hydroxy- 99.5 1.1E-13 2.3E-18 126.2 13.2 98 36-144 2-102 (242)
6 PLN02824 hydrolase, alpha/beta 99.5 7.8E-14 1.7E-18 131.8 12.3 102 36-147 29-140 (294)
7 TIGR02240 PHA_depoly_arom poly 99.5 2.1E-13 4.5E-18 127.9 11.6 102 34-145 23-127 (276)
8 PLN02965 Probable pheophorbida 99.5 2.1E-13 4.5E-18 126.7 11.3 101 37-145 4-108 (255)
9 PLN02679 hydrolase, alpha/beta 99.5 4.8E-13 1E-17 131.6 13.0 103 35-145 87-192 (360)
10 PRK10673 acyl-CoA esterase; Pr 99.5 5.6E-13 1.2E-17 122.2 12.3 101 33-144 13-116 (255)
11 TIGR03611 RutD pyrimidine util 99.4 5.9E-13 1.3E-17 120.1 11.5 103 34-145 11-116 (257)
12 PRK03592 haloalkane dehalogena 99.4 1E-12 2.2E-17 124.3 12.6 99 35-143 26-127 (295)
13 PF12697 Abhydrolase_6: Alpha/ 99.4 1.1E-12 2.4E-17 114.6 11.0 98 39-145 1-102 (228)
14 TIGR03343 biphenyl_bphD 2-hydr 99.4 1.2E-12 2.5E-17 122.0 10.9 101 35-144 29-136 (282)
15 PRK03204 haloalkane dehalogena 99.4 1.6E-12 3.5E-17 123.5 12.0 99 35-143 33-135 (286)
16 PLN02298 hydrolase, alpha/beta 99.4 1.9E-12 4.1E-17 124.8 12.4 108 35-144 58-169 (330)
17 PLN02211 methyl indole-3-aceta 99.4 2E-12 4.3E-17 122.6 12.1 104 35-145 17-123 (273)
18 TIGR01250 pro_imino_pep_2 prol 99.4 3.9E-12 8.4E-17 116.1 13.0 103 35-144 24-131 (288)
19 PLN02578 hydrolase 99.4 2.9E-12 6.3E-17 125.6 12.5 101 35-145 85-188 (354)
20 PRK10349 carboxylesterase BioH 99.4 2.7E-12 5.9E-17 118.6 11.6 92 37-143 14-108 (256)
21 PLN02385 hydrolase; alpha/beta 99.4 3.3E-12 7.3E-17 124.6 12.6 108 35-145 86-198 (349)
22 TIGR02427 protocat_pcaD 3-oxoa 99.4 2.7E-12 6E-17 114.3 10.5 101 35-145 12-115 (251)
23 PHA02857 monoglyceride lipase; 99.4 6.6E-12 1.4E-16 117.3 13.1 106 34-143 23-131 (276)
24 TIGR03056 bchO_mg_che_rel puta 99.4 6.4E-12 1.4E-16 115.8 12.4 102 35-145 27-131 (278)
25 PRK10749 lysophospholipase L2; 99.3 1.1E-11 2.4E-16 120.2 13.6 107 34-144 52-166 (330)
26 TIGR03695 menH_SHCHC 2-succiny 99.3 9.4E-12 2E-16 110.3 11.6 101 36-144 1-105 (251)
27 PLN03087 BODYGUARD 1 domain co 99.3 1.6E-11 3.5E-16 125.7 14.0 103 34-143 199-308 (481)
28 PLN03084 alpha/beta hydrolase 99.3 1.7E-11 3.6E-16 122.4 12.8 101 35-145 126-233 (383)
29 PRK06489 hypothetical protein; 99.3 1.2E-11 2.5E-16 121.5 11.0 101 36-144 69-189 (360)
30 PLN02894 hydrolase, alpha/beta 99.3 3E-11 6.5E-16 121.0 13.5 108 33-146 102-213 (402)
31 TIGR01738 bioH putative pimelo 99.3 2E-11 4.3E-16 108.6 10.1 94 36-144 4-100 (245)
32 TIGR03101 hydr2_PEP hydrolase, 99.3 5.6E-11 1.2E-15 113.2 12.3 104 36-145 25-135 (266)
33 PRK14875 acetoin dehydrogenase 99.2 7.2E-11 1.6E-15 114.5 12.1 101 34-144 129-232 (371)
34 KOG4409|consensus 99.2 4.4E-11 9.6E-16 116.3 9.9 106 34-146 88-197 (365)
35 PRK08775 homoserine O-acetyltr 99.2 4.9E-11 1.1E-15 116.2 9.1 75 60-144 98-173 (343)
36 PLN02652 hydrolase; alpha/beta 99.2 4.2E-10 9E-15 112.8 14.4 107 34-144 134-245 (395)
37 TIGR01249 pro_imino_pep_1 prol 99.2 1.8E-10 3.9E-15 110.3 10.6 102 34-144 25-130 (306)
38 cd00741 Lipase Lipase. Lipase 99.1 2.3E-10 5E-15 99.1 9.1 109 87-198 9-126 (153)
39 KOG4178|consensus 99.1 9.1E-10 2E-14 106.5 12.5 124 32-166 40-166 (322)
40 TIGR01392 homoserO_Ac_trn homo 99.1 4.4E-10 9.4E-15 109.9 10.4 103 35-144 30-162 (351)
41 KOG1454|consensus 99.1 5.5E-10 1.2E-14 109.2 10.7 106 34-146 56-165 (326)
42 PRK07581 hypothetical protein; 99.1 3.4E-10 7.4E-15 109.6 8.6 105 36-144 41-159 (339)
43 PLN02511 hydrolase 99.0 1.2E-09 2.6E-14 108.9 11.6 104 34-142 98-208 (388)
44 PRK11071 esterase YqiA; Provis 99.0 1.1E-09 2.5E-14 98.7 10.3 87 37-145 2-94 (190)
45 PRK00175 metX homoserine O-ace 99.0 1.3E-09 2.8E-14 108.1 11.5 103 35-145 47-183 (379)
46 PRK10566 esterase; Provisional 99.0 1.9E-09 4.2E-14 99.2 11.7 94 34-129 25-128 (249)
47 PF12695 Abhydrolase_5: Alpha/ 99.0 1.7E-09 3.6E-14 90.6 10.3 90 38-142 1-93 (145)
48 COG2267 PldB Lysophospholipase 99.0 2E-09 4.4E-14 104.0 12.2 104 37-144 35-142 (298)
49 KOG2564|consensus 99.0 8.9E-10 1.9E-14 104.5 9.3 108 33-143 71-181 (343)
50 PLN02980 2-oxoglutarate decarb 99.0 1.8E-09 4E-14 124.7 12.9 101 34-143 1369-1479(1655)
51 PLN00021 chlorophyllase 99.0 2.8E-09 6.1E-14 103.7 12.3 101 35-144 51-166 (313)
52 PRK05855 short chain dehydroge 99.0 3E-09 6.6E-14 109.0 11.3 87 34-128 23-114 (582)
53 PRK10985 putative hydrolase; P 99.0 5E-09 1.1E-13 101.5 11.9 106 34-143 56-167 (324)
54 TIGR03100 hydr1_PEP hydrolase, 99.0 9.3E-09 2E-13 97.5 13.2 102 35-143 25-133 (274)
55 PRK05077 frsA fermentation/res 99.0 5.3E-09 1.1E-13 105.4 11.9 105 34-144 192-300 (414)
56 TIGR01836 PHA_synth_III_C poly 98.9 7.1E-09 1.5E-13 101.4 10.9 102 35-144 61-171 (350)
57 PF05990 DUF900: Alpha/beta hy 98.9 6.2E-09 1.3E-13 97.2 9.9 118 26-146 8-139 (233)
58 TIGR01840 esterase_phb esteras 98.9 1.4E-08 3.1E-13 92.4 11.4 109 34-143 11-129 (212)
59 COG0596 MhpC Predicted hydrola 98.9 1.7E-08 3.8E-13 88.0 11.2 100 36-145 21-124 (282)
60 PF00561 Abhydrolase_1: alpha/ 98.9 6.5E-09 1.4E-13 92.4 8.3 76 62-144 1-79 (230)
61 PRK13604 luxD acyl transferase 98.9 2E-08 4.4E-13 97.4 12.1 106 33-147 34-144 (307)
62 TIGR02821 fghA_ester_D S-formy 98.9 3E-08 6.6E-13 94.0 12.5 109 34-143 40-172 (275)
63 KOG2382|consensus 98.8 1.8E-08 4E-13 97.5 9.5 107 33-144 49-159 (315)
64 TIGR01607 PST-A Plasmodium sub 98.8 4.2E-08 9.2E-13 95.8 10.8 108 35-143 20-184 (332)
65 PF01674 Lipase_2: Lipase (cla 98.8 9.6E-09 2.1E-13 95.3 5.8 88 37-129 2-96 (219)
66 PLN02442 S-formylglutathione h 98.8 1.1E-07 2.4E-12 90.9 13.0 107 34-143 45-177 (283)
67 KOG1455|consensus 98.8 1.3E-07 2.7E-12 90.9 13.1 133 15-149 29-169 (313)
68 PRK07868 acyl-CoA synthetase; 98.7 7E-08 1.5E-12 107.0 11.1 104 34-142 65-175 (994)
69 PLN02872 triacylglycerol lipas 98.7 1.9E-08 4.1E-13 101.0 5.8 108 34-146 72-199 (395)
70 PRK11460 putative hydrolase; P 98.7 1.6E-07 3.4E-12 87.2 11.3 109 33-143 13-137 (232)
71 PRK10162 acetyl esterase; Prov 98.7 1.3E-07 2.8E-12 91.9 10.7 101 35-143 80-194 (318)
72 TIGR01838 PHA_synth_I poly(R)- 98.6 2.2E-07 4.7E-12 96.5 12.1 102 35-143 187-301 (532)
73 PF07819 PGAP1: PGAP1-like pro 98.6 3E-07 6.4E-12 85.5 10.9 105 34-142 2-121 (225)
74 PF00975 Thioesterase: Thioest 98.6 6.7E-07 1.4E-11 81.2 12.7 101 37-147 1-107 (229)
75 PF07859 Abhydrolase_3: alpha/ 98.6 6.6E-08 1.4E-12 86.8 6.0 97 39-143 1-109 (211)
76 COG1647 Esterase/lipase [Gener 98.5 5.9E-07 1.3E-11 83.0 10.4 108 30-145 9-119 (243)
77 TIGR03502 lipase_Pla1_cef extr 98.5 7.4E-07 1.6E-11 95.9 12.0 93 35-128 448-575 (792)
78 COG0429 Predicted hydrolase of 98.5 5.4E-07 1.2E-11 87.6 9.7 94 31-128 70-169 (345)
79 TIGR00976 /NonD putative hydro 98.5 5.7E-07 1.2E-11 93.6 9.5 109 35-148 21-136 (550)
80 PRK06765 homoserine O-acetyltr 98.5 1.1E-06 2.4E-11 88.1 10.9 103 34-143 54-195 (389)
81 PF02230 Abhydrolase_2: Phosph 98.4 1.3E-06 2.9E-11 79.7 9.5 116 31-148 9-144 (216)
82 COG0400 Predicted esterase [Ge 98.3 6.8E-06 1.5E-10 75.7 10.6 117 30-147 12-137 (207)
83 PF06342 DUF1057: Alpha/beta h 98.3 9.6E-06 2.1E-10 77.6 11.5 100 36-144 35-137 (297)
84 COG0657 Aes Esterase/lipase [L 98.2 8.1E-06 1.8E-10 78.5 9.3 101 35-143 78-190 (312)
85 PF00326 Peptidase_S9: Prolyl 98.1 4.3E-06 9.3E-11 75.6 6.4 89 54-143 7-98 (213)
86 KOG4627|consensus 98.1 8.9E-06 1.9E-10 74.7 7.6 101 30-140 60-168 (270)
87 KOG1552|consensus 98.1 3E-05 6.5E-10 73.2 10.5 101 34-142 58-161 (258)
88 cd01759 PLAT_PL PLAT/LH2 domai 98.0 1.1E-06 2.4E-11 73.5 0.6 50 278-331 1-54 (113)
89 PF07224 Chlorophyllase: Chlor 98.0 1.3E-05 2.9E-10 75.9 7.4 101 37-146 47-159 (307)
90 PF12740 Chlorophyllase2: Chlo 98.0 2.9E-05 6.3E-10 73.8 9.6 100 36-144 17-131 (259)
91 PF10230 DUF2305: Uncharacteri 98.0 7.6E-05 1.6E-09 71.1 11.9 123 36-158 2-136 (266)
92 PF01738 DLH: Dienelactone hyd 98.0 2.9E-05 6.4E-10 70.6 8.4 106 34-142 12-130 (218)
93 TIGR01839 PHA_synth_II poly(R) 98.0 5.5E-05 1.2E-09 78.8 11.1 103 33-142 212-326 (560)
94 PRK10252 entF enterobactin syn 97.9 5.6E-05 1.2E-09 85.4 12.0 101 35-145 1067-1172(1296)
95 PF06821 Ser_hydrolase: Serine 97.9 5.9E-05 1.3E-09 67.3 9.8 86 39-145 1-92 (171)
96 PF06057 VirJ: Bacterial virul 97.9 3E-05 6.6E-10 70.4 7.8 97 39-144 5-107 (192)
97 COG4782 Uncharacterized protei 97.9 7.2E-05 1.6E-09 73.7 9.9 111 30-142 110-232 (377)
98 PF06028 DUF915: Alpha/beta hy 97.9 5.8E-05 1.3E-09 71.7 8.7 105 35-141 10-140 (255)
99 PF10503 Esterase_phd: Esteras 97.9 0.00014 3E-09 67.7 10.8 102 35-138 15-126 (220)
100 PF00756 Esterase: Putative es 97.9 7.5E-05 1.6E-09 68.9 9.1 125 18-143 6-149 (251)
101 PF05057 DUF676: Putative seri 97.8 6.3E-05 1.4E-09 69.4 8.1 90 37-130 5-100 (217)
102 PF05728 UPF0227: Uncharacteri 97.8 0.00013 2.9E-09 66.1 8.9 86 39-147 2-94 (187)
103 COG3208 GrsT Predicted thioest 97.7 0.00011 2.4E-09 68.9 7.9 146 35-191 6-167 (244)
104 KOG4391|consensus 97.7 2.8E-05 6.1E-10 72.0 3.7 113 21-138 60-178 (300)
105 COG3319 Thioesterase domains o 97.7 0.0002 4.4E-09 68.1 9.5 99 37-145 1-104 (257)
106 PF06500 DUF1100: Alpha/beta h 97.7 8.8E-05 1.9E-09 74.7 7.0 105 34-143 188-295 (411)
107 PF12146 Hydrolase_4: Putative 97.7 0.00018 3.8E-09 56.3 7.2 61 35-96 15-78 (79)
108 KOG1838|consensus 97.6 0.00033 7.2E-09 70.4 9.8 90 34-127 123-218 (409)
109 COG0412 Dienelactone hydrolase 97.6 0.00053 1.2E-08 64.2 10.2 105 37-144 28-146 (236)
110 PF05448 AXE1: Acetyl xylan es 97.5 0.0011 2.5E-08 64.8 12.3 134 6-144 54-209 (320)
111 PRK10439 enterobactin/ferric e 97.5 0.0013 2.8E-08 66.6 12.5 119 20-143 194-322 (411)
112 cd01758 PLAT_LPL PLAT/ LH2 dom 97.5 4.6E-05 1E-09 65.9 1.7 52 278-330 1-57 (137)
113 COG3509 LpqC Poly(3-hydroxybut 97.5 0.00086 1.9E-08 64.7 10.3 117 11-130 38-166 (312)
114 PF03403 PAF-AH_p_II: Platelet 97.5 0.00039 8.5E-09 69.6 8.2 108 34-144 98-262 (379)
115 cd00312 Esterase_lipase Estera 97.4 0.00054 1.2E-08 70.0 9.1 105 34-142 93-211 (493)
116 PLN02733 phosphatidylcholine-s 97.3 0.00085 1.8E-08 68.5 8.9 92 49-150 110-204 (440)
117 PF05677 DUF818: Chlamydia CHL 97.3 0.0014 3E-08 64.5 9.7 69 56-128 166-235 (365)
118 COG3243 PhaC Poly(3-hydroxyalk 97.3 0.0013 2.7E-08 66.3 9.4 99 36-141 107-214 (445)
119 KOG1515|consensus 97.3 0.0019 4.2E-08 63.7 10.6 105 34-143 88-206 (336)
120 COG1075 LipA Predicted acetylt 97.3 0.00068 1.5E-08 66.7 7.4 101 36-146 59-166 (336)
121 PRK04940 hypothetical protein; 97.2 0.0023 4.9E-08 57.8 9.2 33 108-144 60-92 (180)
122 PF09752 DUF2048: Uncharacteri 97.2 0.0022 4.8E-08 63.3 9.9 108 32-144 88-210 (348)
123 COG2021 MET2 Homoserine acetyl 97.2 0.0011 2.5E-08 65.5 7.5 103 34-143 49-181 (368)
124 smart00824 PKS_TE Thioesterase 97.1 0.0047 1E-07 53.8 10.4 89 49-147 15-105 (212)
125 cd01755 PLAT_lipase PLAT/ LH2 97.1 0.00025 5.4E-09 59.8 2.1 52 278-331 1-56 (120)
126 KOG3724|consensus 97.0 0.0023 4.9E-08 68.5 8.5 129 9-141 55-217 (973)
127 PF12715 Abhydrolase_7: Abhydr 97.0 0.0025 5.4E-08 63.7 8.4 103 33-138 112-254 (390)
128 TIGR01849 PHB_depoly_PhaZ poly 96.9 0.013 2.8E-07 59.4 12.8 96 36-141 102-205 (406)
129 KOG2624|consensus 96.8 0.0012 2.6E-08 66.7 4.6 108 34-144 71-199 (403)
130 PF02129 Peptidase_S15: X-Pro 96.8 0.0058 1.2E-07 57.7 9.0 109 32-144 16-136 (272)
131 COG1506 DAP2 Dipeptidyl aminop 96.8 0.0037 8.1E-08 66.3 8.0 90 36-129 394-494 (620)
132 KOG4667|consensus 96.8 0.0088 1.9E-07 55.7 9.1 92 32-130 29-127 (269)
133 PF08538 DUF1749: Protein of u 96.7 0.013 2.9E-07 57.0 10.6 104 35-143 32-147 (303)
134 PTZ00472 serine carboxypeptida 96.7 0.0062 1.3E-07 62.6 8.8 67 61-129 121-192 (462)
135 COG2945 Predicted hydrolase of 96.7 0.017 3.7E-07 52.8 10.4 106 33-144 25-138 (210)
136 PLN02633 palmitoyl protein thi 96.6 0.0099 2.1E-07 57.9 9.1 96 36-140 25-127 (314)
137 COG2272 PnbA Carboxylesterase 96.6 0.0031 6.8E-08 64.6 5.7 107 35-145 93-218 (491)
138 PF11187 DUF2974: Protein of u 96.5 0.005 1.1E-07 57.4 6.0 49 93-144 72-123 (224)
139 PLN02606 palmitoyl-protein thi 96.5 0.015 3.1E-07 56.7 9.2 96 35-140 25-128 (306)
140 PF02450 LCAT: Lecithin:choles 96.5 0.0098 2.1E-07 59.7 8.4 83 49-143 67-159 (389)
141 PF10340 DUF2424: Protein of u 96.5 0.014 3.1E-07 58.3 9.2 99 36-143 122-234 (374)
142 KOG2112|consensus 96.4 0.022 4.8E-07 52.4 9.0 107 36-145 3-129 (206)
143 PF12048 DUF3530: Protein of u 96.3 0.063 1.4E-06 52.4 12.6 108 37-148 88-233 (310)
144 COG4814 Uncharacterized protei 96.3 0.036 7.9E-07 52.7 10.3 104 36-141 45-173 (288)
145 PF01764 Lipase_3: Lipase (cla 96.2 0.011 2.4E-07 49.5 6.1 40 89-130 47-86 (140)
146 COG4757 Predicted alpha/beta h 96.2 0.0048 1E-07 57.9 3.9 90 35-128 28-125 (281)
147 PRK10115 protease 2; Provision 96.2 0.03 6.6E-07 60.3 10.6 106 35-142 444-557 (686)
148 PF02089 Palm_thioest: Palmito 96.1 0.014 2.9E-07 56.3 6.3 101 35-140 4-112 (279)
149 COG3545 Predicted esterase of 96.1 0.035 7.6E-07 50.0 8.5 92 36-144 2-94 (181)
150 PF00135 COesterase: Carboxyle 96.0 0.012 2.5E-07 60.1 6.2 105 35-142 124-243 (535)
151 PF06259 Abhydrolase_8: Alpha/ 96.0 0.084 1.8E-06 47.6 10.7 83 61-146 60-146 (177)
152 PF08840 BAAT_C: BAAT / Acyl-C 95.9 0.018 3.8E-07 53.0 6.0 58 90-149 4-61 (213)
153 COG3946 VirJ Type IV secretory 95.7 0.016 3.4E-07 58.2 5.4 83 39-130 263-348 (456)
154 COG3458 Acetyl esterase (deace 95.7 0.027 5.9E-07 54.1 6.5 132 6-142 54-208 (321)
155 PF03583 LIP: Secretory lipase 95.7 0.042 9.1E-07 53.0 7.9 88 52-146 18-112 (290)
156 cd00519 Lipase_3 Lipase (class 95.6 0.024 5.2E-07 52.1 5.6 39 90-130 112-150 (229)
157 COG4188 Predicted dienelactone 95.6 0.078 1.7E-06 52.8 9.5 91 35-126 70-177 (365)
158 KOG2565|consensus 95.5 0.09 1.9E-06 52.6 9.5 91 37-134 153-254 (469)
159 PF01083 Cutinase: Cutinase; 95.4 0.049 1.1E-06 48.9 7.0 63 61-128 39-101 (179)
160 KOG2541|consensus 95.0 0.14 3E-06 49.2 8.7 101 32-140 19-124 (296)
161 KOG2984|consensus 94.9 0.026 5.7E-07 52.2 3.8 101 38-143 44-148 (277)
162 COG4099 Predicted peptidase [G 94.9 0.12 2.6E-06 50.3 8.4 96 37-138 192-298 (387)
163 COG2819 Predicted hydrolase of 94.3 0.55 1.2E-05 45.0 11.1 41 103-144 132-172 (264)
164 PRK05371 x-prolyl-dipeptidyl a 94.3 0.3 6.4E-06 53.5 10.6 86 55-143 273-372 (767)
165 PF03959 FSH1: Serine hydrolas 94.1 0.16 3.6E-06 46.3 7.2 106 35-145 3-146 (212)
166 COG2382 Fes Enterochelin ester 94.1 0.13 2.7E-06 50.0 6.5 113 27-143 89-211 (299)
167 PLN02408 phospholipase A1 94.0 0.097 2.1E-06 52.3 5.7 43 88-130 180-222 (365)
168 PLN02454 triacylglycerol lipas 94.0 0.12 2.6E-06 52.4 6.4 41 87-129 207-249 (414)
169 COG3571 Predicted hydrolase of 93.6 0.5 1.1E-05 42.5 8.7 97 37-141 15-121 (213)
170 PF08237 PE-PPE: PE-PPE domain 93.5 0.21 4.6E-06 46.6 6.8 81 60-145 1-91 (225)
171 KOG3847|consensus 93.3 0.28 6E-06 48.2 7.3 108 33-143 115-274 (399)
172 KOG1516|consensus 93.2 0.47 1E-05 49.2 9.4 89 36-126 112-213 (545)
173 COG3150 Predicted esterase [Ge 93.1 0.41 8.9E-06 43.1 7.5 90 39-148 2-95 (191)
174 PLN02847 triacylglycerol lipas 93.1 0.59 1.3E-05 49.5 9.8 25 106-130 249-273 (633)
175 KOG1553|consensus 92.9 0.26 5.7E-06 49.0 6.5 75 61-142 268-342 (517)
176 KOG3101|consensus 92.8 0.12 2.6E-06 48.2 3.8 107 36-143 44-175 (283)
177 PLN02324 triacylglycerol lipas 92.7 0.23 4.9E-06 50.4 6.0 42 88-129 195-236 (415)
178 PLN02571 triacylglycerol lipas 92.6 0.24 5.2E-06 50.3 6.1 21 109-129 227-247 (413)
179 PF05277 DUF726: Protein of un 92.5 0.18 3.8E-06 50.1 4.8 100 84-189 200-304 (345)
180 PLN00413 triacylglycerol lipas 92.4 0.2 4.2E-06 51.6 5.2 24 106-129 282-305 (479)
181 KOG2931|consensus 92.0 1.1 2.4E-05 43.7 9.3 99 35-143 45-156 (326)
182 KOG4372|consensus 91.9 0.091 2E-06 52.8 2.0 84 38-129 82-171 (405)
183 PLN02802 triacylglycerol lipas 91.8 0.16 3.5E-06 52.6 3.8 43 88-130 310-352 (509)
184 PLN02310 triacylglycerol lipas 91.8 0.25 5.4E-06 50.0 5.0 22 108-129 209-230 (405)
185 KOG2385|consensus 91.7 0.19 4.1E-06 52.1 4.0 118 80-205 423-547 (633)
186 PF03096 Ndr: Ndr family; Int 91.5 0.85 1.8E-05 44.1 8.2 100 35-144 22-134 (283)
187 PLN02761 lipase class 3 family 91.5 0.33 7.2E-06 50.5 5.6 42 88-129 270-315 (527)
188 PLN02162 triacylglycerol lipas 91.2 0.33 7.1E-06 50.0 5.2 24 106-129 276-299 (475)
189 COG0627 Predicted esterase [Ge 91.2 0.84 1.8E-05 44.8 7.9 33 109-142 153-185 (316)
190 PF02273 Acyl_transf_2: Acyl t 91.1 1.5 3.3E-05 41.8 9.1 98 35-139 29-129 (294)
191 PLN02753 triacylglycerol lipas 90.9 0.46 9.9E-06 49.6 6.0 42 88-129 289-333 (531)
192 PLN03037 lipase class 3 family 90.7 0.33 7.2E-06 50.5 4.7 22 108-129 318-339 (525)
193 KOG2281|consensus 90.0 0.69 1.5E-05 49.3 6.3 175 5-189 608-801 (867)
194 KOG3975|consensus 89.8 2.6 5.6E-05 40.4 9.5 123 35-158 28-161 (301)
195 PLN02719 triacylglycerol lipas 89.6 0.63 1.4E-05 48.4 5.7 42 88-129 275-319 (518)
196 PLN02934 triacylglycerol lipas 88.0 0.68 1.5E-05 48.1 4.7 24 106-129 319-342 (515)
197 PF07082 DUF1350: Protein of u 86.5 5.7 0.00012 37.8 9.6 68 57-130 43-112 (250)
198 PF04301 DUF452: Protein of un 86.2 3.1 6.7E-05 38.7 7.5 78 35-142 10-88 (213)
199 PF05577 Peptidase_S28: Serine 85.8 9.4 0.0002 38.5 11.6 104 31-135 24-139 (434)
200 PF00450 Peptidase_S10: Serine 85.3 2.9 6.3E-05 41.3 7.4 68 61-129 85-157 (415)
201 KOG2100|consensus 84.4 3.3 7.2E-05 45.4 8.0 113 29-143 519-643 (755)
202 KOG2369|consensus 83.2 1.6 3.5E-05 44.9 4.6 39 90-130 166-204 (473)
203 KOG4840|consensus 82.9 3.1 6.8E-05 39.3 6.0 100 37-143 37-143 (299)
204 PF11339 DUF3141: Protein of u 82.7 13 0.00028 39.2 10.8 103 27-139 59-170 (581)
205 PLN02517 phosphatidylcholine-s 81.2 2.2 4.7E-05 45.4 4.8 38 90-129 197-234 (642)
206 KOG3043|consensus 81.0 3.5 7.5E-05 38.8 5.5 95 43-142 49-152 (242)
207 KOG3967|consensus 80.4 8.4 0.00018 36.2 7.8 39 105-143 187-226 (297)
208 KOG4569|consensus 80.2 2.5 5.5E-05 41.7 4.7 37 92-130 157-193 (336)
209 COG5153 CVT17 Putative lipase 79.3 2.2 4.8E-05 41.6 3.8 26 105-130 273-298 (425)
210 KOG4540|consensus 79.3 2.2 4.8E-05 41.6 3.8 26 105-130 273-298 (425)
211 KOG2551|consensus 78.8 8.2 0.00018 36.2 7.2 32 92-127 92-123 (230)
212 KOG2029|consensus 77.9 5.3 0.00011 42.4 6.3 62 60-122 477-540 (697)
213 COG1770 PtrB Protease II [Amin 75.3 2.8 6.1E-05 44.8 3.6 74 96-171 515-599 (682)
214 COG2936 Predicted acyl esteras 69.5 13 0.00029 39.3 6.9 71 56-129 75-145 (563)
215 smart00037 CNX Connexin homolo 69.4 3.3 7.1E-05 27.3 1.5 24 184-209 9-34 (34)
216 KOG2237|consensus 64.8 6.6 0.00014 42.1 3.6 97 32-130 466-571 (712)
217 KOG4389|consensus 59.8 11 0.00023 39.5 3.9 61 59-121 164-231 (601)
218 KOG3253|consensus 58.5 20 0.00044 38.4 5.7 85 35-126 175-268 (784)
219 KOG4388|consensus 55.8 19 0.0004 38.5 4.9 58 60-125 426-486 (880)
220 PLN02213 sinapoylglucose-malat 55.4 43 0.00094 32.6 7.3 66 62-129 2-72 (319)
221 PLN03016 sinapoylglucose-malat 54.9 26 0.00056 35.9 5.8 67 61-129 115-186 (433)
222 PF11288 DUF3089: Protein of u 54.1 32 0.00069 31.9 5.7 66 60-128 44-115 (207)
223 PF06441 EHN: Epoxide hydrolas 50.3 8.1 0.00017 32.2 1.1 21 32-52 88-108 (112)
224 COG4822 CbiK Cobalamin biosynt 50.0 56 0.0012 30.7 6.6 66 32-117 134-203 (265)
225 PF05705 DUF829: Eukaryotic pr 47.2 1.1E+02 0.0025 27.8 8.4 81 38-126 1-86 (240)
226 TIGR03712 acc_sec_asp2 accesso 47.1 46 0.001 34.8 6.1 89 35-131 288-380 (511)
227 PF10081 Abhydrolase_9: Alpha/ 46.7 63 0.0014 31.4 6.7 68 55-125 55-126 (289)
228 KOG1202|consensus 45.9 83 0.0018 36.8 8.1 95 32-144 2119-2219(2376)
229 cd01752 PLAT_polycystin PLAT/L 45.6 29 0.00063 28.8 3.8 49 279-329 2-57 (120)
230 PF03283 PAE: Pectinacetyleste 44.3 40 0.00088 33.7 5.2 57 91-149 139-199 (361)
231 KOG2183|consensus 43.9 93 0.002 32.1 7.6 90 37-130 81-189 (492)
232 PF14253 AbiH: Bacteriophage a 42.2 18 0.0004 33.7 2.3 18 106-123 233-250 (270)
233 PLN02209 serine carboxypeptida 40.0 67 0.0015 33.0 6.1 67 61-129 117-188 (437)
234 cd01714 ETF_beta The electron 38.1 1.8E+02 0.004 26.3 8.2 71 57-142 73-147 (202)
235 COG2939 Carboxypeptidase C (ca 37.8 49 0.0011 34.6 4.7 78 61-139 146-231 (498)
236 cd07205 Pat_PNPLA6_PNPLA7_NTE1 36.6 75 0.0016 27.6 5.2 34 92-128 15-48 (175)
237 cd07210 Pat_hypo_W_succinogene 36.1 72 0.0016 29.4 5.2 34 91-127 14-47 (221)
238 cd07224 Pat_like Patatin-like 34.0 91 0.002 28.9 5.6 39 89-128 11-49 (233)
239 PF07519 Tannase: Tannase and 33.7 44 0.00095 34.6 3.7 43 101-144 108-150 (474)
240 PF11144 DUF2920: Protein of u 33.2 89 0.0019 31.9 5.6 29 109-138 185-213 (403)
241 KOG2182|consensus 32.9 2.9E+02 0.0062 29.1 9.3 115 31-149 81-210 (514)
242 PF10686 DUF2493: Protein of u 32.8 46 0.001 25.4 2.8 42 32-73 27-71 (71)
243 PF09994 DUF2235: Uncharacteri 32.2 77 0.0017 30.2 4.9 42 87-129 72-113 (277)
244 PF07643 DUF1598: Protein of u 31.6 74 0.0016 25.3 3.8 51 92-146 29-80 (84)
245 smart00827 PKS_AT Acyl transfe 31.6 82 0.0018 29.6 5.0 30 97-129 74-103 (298)
246 TIGR02816 pfaB_fam PfaB family 30.8 60 0.0013 34.4 4.1 29 99-129 258-286 (538)
247 cd07198 Patatin Patatin-like p 30.1 1.1E+02 0.0024 26.5 5.2 37 91-130 12-48 (172)
248 PF04083 Abhydro_lipase: Parti 28.8 29 0.00063 25.8 1.1 19 30-48 37-55 (63)
249 PF06792 UPF0261: Uncharacteri 28.4 3E+02 0.0066 28.1 8.5 83 51-138 19-124 (403)
250 TIGR03131 malonate_mdcH malona 27.7 1.1E+02 0.0023 29.0 5.0 22 108-129 76-97 (295)
251 cd07209 Pat_hypo_Ecoli_Z1214_l 27.4 1.4E+02 0.0029 27.2 5.4 34 93-129 14-47 (215)
252 cd00113 PLAT PLAT (Polycystin- 26.9 1E+02 0.0022 24.9 4.1 49 279-329 2-56 (116)
253 PLN02752 [acyl-carrier protein 26.2 77 0.0017 31.0 3.8 19 111-129 127-145 (343)
254 KOG1551|consensus 25.9 78 0.0017 30.9 3.6 36 106-142 193-228 (371)
255 PRK12467 peptide synthase; Pro 25.6 2.9E+02 0.0062 36.4 9.5 104 35-148 3691-3799(3956)
256 KOG1282|consensus 25.5 1.2E+02 0.0027 31.3 5.3 68 61-129 117-189 (454)
257 COG4425 Predicted membrane pro 25.2 1.2E+02 0.0027 31.6 5.0 73 44-121 332-410 (588)
258 cd07207 Pat_ExoU_VipD_like Exo 24.3 1.6E+02 0.0034 25.8 5.2 33 93-128 15-47 (194)
259 COG2830 Uncharacterized protei 24.0 1.7E+02 0.0037 26.6 5.1 77 38-144 13-90 (214)
260 PF00698 Acyl_transf_1: Acyl t 23.9 72 0.0016 30.7 3.1 22 107-128 83-104 (318)
261 cd07230 Pat_TGL4-5_like Triacy 23.5 1.5E+02 0.0033 30.2 5.5 35 91-128 87-121 (421)
262 COG3727 Vsr DNA G:T-mismatch r 23.4 1.2E+02 0.0027 26.3 4.0 12 33-44 54-65 (150)
263 TIGR00128 fabD malonyl CoA-acy 22.8 1.4E+02 0.0031 27.8 4.8 23 107-129 82-104 (290)
264 cd07208 Pat_hypo_Ecoli_yjju_li 22.2 1.7E+02 0.0037 27.3 5.2 35 91-128 12-47 (266)
265 COG0529 CysC Adenylylsulfate k 21.9 3.6E+02 0.0079 24.8 6.9 38 32-69 18-59 (197)
266 PF06309 Torsin: Torsin; Inte 21.8 1.1E+02 0.0024 26.2 3.4 26 33-58 49-79 (127)
267 PF00326 Peptidase_S9: Prolyl 21.2 2.7E+02 0.0058 24.5 6.1 59 35-102 143-209 (213)
268 PF10664 NdhM: Cyanobacterial 21.1 70 0.0015 26.4 2.0 37 82-118 65-102 (108)
269 COG3675 Predicted lipase [Lipi 20.4 24 0.00052 34.5 -1.0 63 61-130 133-197 (332)
No 1
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=100.00 E-value=1.8e-78 Score=607.16 Aligned_cols=318 Identities=25% Similarity=0.374 Sum_probs=274.6
Q ss_pred EEEEEEeeccccccc--ccc-c------chhccCCCccEEEEcCCCCC------hHHHHHHHhhc-CCeEEEEEcCCCCc
Q psy2108 10 TVSLTLNFRLRRFYA--IVT-E------EILIRQKTFTNVIYHLMSIS------IFFISTEYFKR-GDYNVWFVNWPELC 73 (345)
Q Consensus 10 ~~~~~~~~~~~~~~~--~~~-~------~~~~~~~~pt~vliHG~~~s------~~~l~~a~L~~-~~~NVI~vDw~~~~ 73 (345)
++.|.|+||.|+... .+. . .-.++..+||+|+||||..+ ...+.++++.+ .++|||+|||++++
T Consensus 6 ~~~F~L~Tr~n~~~~~~~l~~~~~~si~~s~Fn~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g 85 (442)
T TIGR03230 6 ESKFSLRTPEEPDDDTCYIVPGQPDSIADCNFNHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRA 85 (442)
T ss_pred ccEEEEEecCCCCCCceEEecCChhhhhhcCcCCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcC
Confidence 568999999998752 121 1 12367789999999999532 33466666644 47999999999999
Q ss_pred CCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCCCCCCCCCC
Q psy2108 74 RGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMPMFMSRDRD 153 (345)
Q Consensus 74 ~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP~F~~~~~~ 153 (345)
.+ .|+.++.+++.+|++|++||++|.+..+++++++|||||||||||||++|++.+ ++|+||||||||+|+|+..++.
T Consensus 86 ~s-~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p-~rV~rItgLDPAgP~F~~~~~~ 163 (442)
T TIGR03230 86 QQ-HYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTK-HKVNRITGLDPAGPTFEYADAP 163 (442)
T ss_pred CC-CCccccccHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCC-cceeEEEEEcCCCCcccccccc
Confidence 87 699888999999999999999998777889999999999999999999999875 8999999999999999998889
Q ss_pred CCCCccccceeeEEecCCC-----cCCccccCCCcccccCCCcCCCCCCCCC--------------CCCcCCCCchHHHH
Q psy2108 154 HRLDSEDAKFVDVIHTSAF-----VQGQYSRSGHVDFYMNGGIEQPGCWNAS--------------NPFDCNHRRAPQYF 214 (345)
Q Consensus 154 ~rL~~~DA~fVdviHT~~~-----~~G~~~piGh~DfypNGG~~QPGC~~~~--------------~~~~CsH~ra~~~f 214 (345)
.|||++||+|||||||+++ .+|+.+|+||+|||||||..||||.... +.+.|||.||++||
T Consensus 164 ~rLd~~DA~fVdVIHTd~~~~~~~~lG~~~piGh~DFYPNGG~~QPGC~~~~~~~~~~~~~~~~~~~~~~CsH~Ra~~~f 243 (442)
T TIGR03230 164 STLSPDDADFVDVLHTNTRGSPDRSIGIQRPVGHIDIYPNGGTFQPGCDIQETLLVIAEKGLGNMDQLVKCSHERSIHLF 243 (442)
T ss_pred cccCCCCCCeEEEEEecCCccccccccccccccceEeccCCCCCCCCCCccccccccccccccccCcCccchhHHHHHHH
Confidence 9999999999999999985 6999999999999999999999997531 23689999999999
Q ss_pred HHhhcc-CCCeeeeecCChhhhhcCCCCCCC--cccccCcccccccccccceeEEeeeCCCCceeeeEEEEEEeeeeccC
Q psy2108 215 AESINS-KEGFWGFPCAGIISYLFGMCPVKE--PIKLMGEMCAESFITSDTCFHLHSSTMKFTLVCVVFIVSTILLFQMS 291 (345)
Q Consensus 215 ~eSi~~-~~~f~a~~C~s~~~~~~g~C~~~~--~~~~mG~~~~~~~~~~~~G~yyl~T~~~~P~~~~~~~~~~~~~~~~~ 291 (345)
+|||.+ +++|+|++|.||++|..|.|.+|. +|+.|||++++.. ...+|.|||+|++.+||+.+||||++++++++
T Consensus 244 ~eSi~~~~~~f~a~~C~s~~~f~~g~C~~c~~~~c~~mG~~~~~~~-~~~~g~~yl~T~~~~Pf~~~~y~v~v~~~~~~- 321 (442)
T TIGR03230 244 IDSLLNEENPSMAYRCSSKEAFNKGLCLSCRKNRCNKLGYEINKVR-TKRSSKMYLKTREMMPYKVFHYQVKVHFFGKT- 321 (442)
T ss_pred HHHhcccCCCeeeEECCCHHHHhcCCCCCCCCCCCceeCccccccc-cCCceEEEEEeCCCCCceEEEEEEEEEEeccc-
Confidence 999954 579999999999999999998753 5899999998753 23369999999999999999999999988775
Q ss_pred cccccCCCeeEEEeecc-cCceeeeec---CCCchhHhHHHHHH
Q psy2108 292 AATYRKPPFNGSIFGKR-STNTIEFDS---NTGKTFASMCEIAS 331 (345)
Q Consensus 292 ~~~~~~ppf~~sL~Gt~-~~~~i~~~~---~~~~t~~~~~~~~~ 331 (345)
+...++++|+++|||++ +++++++.. ++|+||+++++...
T Consensus 322 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~t~~~~i~~~~ 365 (442)
T TIGR03230 322 SLSHTDQPMKISLYGTHGEKENIPFTLPEVSTNKTYSFLITTDV 365 (442)
T ss_pred cccccCCcEEEEEEcCCCCccceEEeeeeecCCCeEEEEEeccc
Confidence 44478999999999999 799999883 79999999987654
No 2
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=100.00 E-value=2e-71 Score=540.90 Aligned_cols=264 Identities=37% Similarity=0.506 Sum_probs=199.3
Q ss_pred EEEEEeecccccccccc--------cchhccCCCccEEEEcCCCC------ChHHHHHHHhhc--CCeEEEEEcCCCCcC
Q psy2108 11 VSLTLNFRLRRFYAIVT--------EEILIRQKTFTNVIYHLMSI------SIFFISTEYFKR--GDYNVWFVNWPELCR 74 (345)
Q Consensus 11 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~pt~vliHG~~~------s~~~l~~a~L~~--~~~NVI~vDw~~~~~ 74 (345)
+.+.|++|.++...... +.-.++.++||+|+||||.. |...++++++++ +++|||+|||+..+.
T Consensus 38 v~f~LyT~~n~~~~~~l~~~~~~~l~~s~fn~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~ 117 (331)
T PF00151_consen 38 VKFYLYTRSNPDNPQLLDNGDPESLRNSNFNPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGAS 117 (331)
T ss_dssp -EEEEEETTEECCEEEEBTSSTHHHHTSS--TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHS
T ss_pred eEEEEECCCCCCceeEeccCCcccccccccCCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcc
Confidence 56888888886432222 11236778999999999953 367788889988 899999999999988
Q ss_pred CCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCC-CCCCeeeccCCCCCCCCCCCCC
Q psy2108 75 GPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRP-YKLPRITGLDPAMPMFMSRDRD 153 (345)
Q Consensus 75 s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-~~v~rItgLDPAgP~F~~~~~~ 153 (345)
. .|..++.+++.||+.||+||+.|.+..|+++++||||||||||||||++|+++.+ +||+||||||||+|+|+..++.
T Consensus 118 ~-~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F~~~~~~ 196 (331)
T PF00151_consen 118 N-NYPQAVANTRLVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLFENNPPS 196 (331)
T ss_dssp S--HHHHHHHHHHHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTTTTS-TT
T ss_pred c-cccchhhhHHHHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccccCCChh
Confidence 7 7999999999999999999999997779999999999999999999999999974 5999999999999999998889
Q ss_pred CCCCccccceeeEEecCC-----CcCCccccCCCcccccCCCcCCCCCCCCC----CCCcCCCCchHHHHHHhhccCCCe
Q psy2108 154 HRLDSEDAKFVDVIHTSA-----FVQGQYSRSGHVDFYMNGGIEQPGCWNAS----NPFDCNHRRAPQYFAESINSKEGF 224 (345)
Q Consensus 154 ~rL~~~DA~fVdviHT~~-----~~~G~~~piGh~DfypNGG~~QPGC~~~~----~~~~CsH~ra~~~f~eSi~~~~~f 224 (345)
.||+++||+|||||||++ +.+|+.+|+||+|||||||..||||.... ....|||.||++||+|||.+++.|
T Consensus 197 ~rL~~~DA~fVdvIHT~~~~~~~~~~G~~~~~Gh~DFYpNgG~~QPGC~~~~~~~~~~~~CsH~ra~~~f~eSi~~~~~f 276 (331)
T PF00151_consen 197 ERLDKSDAKFVDVIHTNAGTLPGGGLGTSEPIGHVDFYPNGGRRQPGCGNDSLELTRFISCSHMRAVEYFAESINNPCNF 276 (331)
T ss_dssp TS--GGGSSEEEEE-SSES-HHH-SSBESS--SSEEEEETTTTS-TTSSS-CHTTCSHHHHHHHHHHHHHHHHHHSTTTT
T ss_pred HhhhccCCceEEEEEcCCccccCCccccccccccceeecCCCccCCCCccccccceecchhhhHHHHHHHHHHhcCCCCc
Confidence 999999999999999999 89999999999999999999999998753 234699999999999999999999
Q ss_pred eeeecCChhhhhcCCCCCCC--cccccCccccccc--ccccceeEEeeeCCCCce
Q psy2108 225 WGFPCAGIISYLFGMCPVKE--PIKLMGEMCAESF--ITSDTCFHLHSSTMKFTL 275 (345)
Q Consensus 225 ~a~~C~s~~~~~~g~C~~~~--~~~~mG~~~~~~~--~~~~~G~yyl~T~~~~P~ 275 (345)
+|++|.||.+|..|.|..|. .++.||+++++.. ....+|+|||+|++++||
T Consensus 277 ~a~~C~s~~~~~~g~C~~c~~~~~~~mG~~~~~~~~~~~~~~G~yyl~T~~~~Pf 331 (331)
T PF00151_consen 277 PAVRCSSYDSFLAGKCDGCNNNRCAVMGYHADKFKGKTSPARGIYYLETNAKSPF 331 (331)
T ss_dssp B-EE-S-HHHHHTTTS-S--TT---BSSGGGGGSTTTTSSSSEEEEE---SSST-
T ss_pred eeEeCcCHHHHhhcccccCCCCCCcCCCCCcccCCccccCCCeEEEEeeCCCCcC
Confidence 99999999999999998743 5799999965532 112469999999999998
No 3
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=100.00 E-value=3.7e-65 Score=485.18 Aligned_cols=257 Identities=37% Similarity=0.509 Sum_probs=226.1
Q ss_pred EEEEEEeeccccccccccc--------chhccCCCccEEEEcCCCCC-----hHHHHHHHhhcCCeEEEEEcCCCCcCCC
Q psy2108 10 TVSLTLNFRLRRFYAIVTE--------EILIRQKTFTNVIYHLMSIS-----IFFISTEYFKRGDYNVWFVNWPELCRGP 76 (345)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~pt~vliHG~~~s-----~~~l~~a~L~~~~~NVI~vDw~~~~~s~ 76 (345)
.++|.|+||.|+.....-. ...+++++|++|+||||..+ ...+++++++++++|||+|||++++..
T Consensus 2 ~~~f~l~t~~~~~~~~~~~~~~~~~~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~- 80 (275)
T cd00707 2 DVRFLLYTRENPNCPQLLFADDPSSLKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANP- 80 (275)
T ss_pred CCEEEEecCCCCCCceEecCCChhhhhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECcccccc-
Confidence 4689999999977543321 13366678999999999542 456778888878999999999998554
Q ss_pred CccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCCCCCCCCCCCCC
Q psy2108 77 CYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMPMFMSRDRDHRL 156 (345)
Q Consensus 77 ~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP~F~~~~~~~rL 156 (345)
.|+.+..+++.++++++++|+.|.+..+++++++|||||||||||||++|++++ ++|+||++||||+|+|+...+..||
T Consensus 81 ~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~-~~v~~iv~LDPa~p~f~~~~~~~rl 159 (275)
T cd00707 81 NYPQAVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLN-GKLGRITGLDPAGPLFSGADPEDRL 159 (275)
T ss_pred ChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhc-CccceeEEecCCcccccCCCccccc
Confidence 798888899999999999999998877788999999999999999999999986 7999999999999999988889999
Q ss_pred CccccceeeEEecCCCcCCccccCCCcccccCCCcCCCCCCCCC---CCCcCCCCchHHHHHHhhccCCCeeeeecCChh
Q psy2108 157 DSEDAKFVDVIHTSAFVQGQYSRSGHVDFYMNGGIEQPGCWNAS---NPFDCNHRRAPQYFAESINSKEGFWGFPCAGII 233 (345)
Q Consensus 157 ~~~DA~fVdviHT~~~~~G~~~piGh~DfypNGG~~QPGC~~~~---~~~~CsH~ra~~~f~eSi~~~~~f~a~~C~s~~ 233 (345)
+++||+|||||||+++.+|+.+|+||+|||||||..||||.... ....|||.||++||+|||.++++|+|++|++|+
T Consensus 160 ~~~dA~~V~vihT~~~~~G~~~~~gh~dfypngg~~QpgC~~~~~~~~~~~CsH~ra~~~~~esi~~~~~f~a~~C~~~~ 239 (275)
T cd00707 160 DPSDAQFVDVIHTDGGLLGFSQPIGHADFYPNGGRDQPGCPKDILSSDFVACSHQRAVHYFAESILSPCGFVAYPCSSYD 239 (275)
T ss_pred CCCCCCeEEEEEeCCCCCCccccccceEeccCCCCCCCCCCCccccccccccchHHHHHHHHHHccCCCCceeEeCCCHH
Confidence 99999999999999999999999999999999999999998642 246899999999999999988999999999999
Q ss_pred hhhcCCCCCCC-cccccCcccccccccccceeEEeeeCC
Q psy2108 234 SYLFGMCPVKE-PIKLMGEMCAESFITSDTCFHLHSSTM 271 (345)
Q Consensus 234 ~~~~g~C~~~~-~~~~mG~~~~~~~~~~~~G~yyl~T~~ 271 (345)
+|..+.|..+. .+..||+++++..+ +|+|||+|++
T Consensus 240 ~~~~~~C~~~~~~~~~mG~~~~~~~~---~G~~~~~T~~ 275 (275)
T cd00707 240 EFLAGKCFPCGSGCVRMGYHADRFRR---EGKFYLKTNA 275 (275)
T ss_pred HHhcCCCCCCCCCCcccCCccCCCCC---CceEEEEcCC
Confidence 99999998764 57899999887542 5999999985
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.55 E-value=4.2e-14 Score=134.49 Aligned_cols=104 Identities=10% Similarity=0.020 Sum_probs=81.3
Q ss_pred CCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccc-cccCHHHHHHHHHHHHHHHHhhcCCCCCCE
Q psy2108 35 KTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVI-SVYNLEQVGKCVAQMIKRLSKYIGDVEPDM 110 (345)
Q Consensus 35 ~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~-a~~~~~~vg~~la~~i~~L~~~~g~~~~~v 110 (345)
++|++||||||..+ |..+.+. |.+.+|+|+++|++++|.|..-.. ...+....+++++++++.| +.+++
T Consensus 45 ~~~~lvliHG~~~~~~~w~~~~~~-L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l------~~~~v 117 (302)
T PRK00870 45 DGPPVLLLHGEPSWSYLYRKMIPI-LAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL------DLTDV 117 (302)
T ss_pred CCCEEEEECCCCCchhhHHHHHHH-HHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc------CCCCE
Confidence 46899999998654 5555554 555589999999999998842111 2345677788888887766 46799
Q ss_pred EEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCCC
Q psy2108 111 HLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMPM 146 (345)
Q Consensus 111 hLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP~ 146 (345)
+||||||||.||..++...+ ++|.+++.++|+.|.
T Consensus 118 ~lvGhS~Gg~ia~~~a~~~p-~~v~~lvl~~~~~~~ 152 (302)
T PRK00870 118 TLVCQDWGGLIGLRLAAEHP-DRFARLVVANTGLPT 152 (302)
T ss_pred EEEEEChHHHHHHHHHHhCh-hheeEEEEeCCCCCC
Confidence 99999999999999998775 899999999986543
No 5
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.53 E-value=1.1e-13 Score=126.16 Aligned_cols=98 Identities=17% Similarity=0.132 Sum_probs=76.6
Q ss_pred CccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEE
Q psy2108 36 TFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHL 112 (345)
Q Consensus 36 ~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhL 112 (345)
+|++||+||+..+ |..+.+. | .+|+||++||+++|.|. .+. ..+....++++.++++.+ ..++++|
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~-l--~~~~vi~~D~~G~G~S~-~~~-~~~~~~~~~~l~~~l~~~------~~~~~~l 70 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEA-L--PDYPRLYIDLPGHGGSA-AIS-VDGFADVSRLLSQTLQSY------NILPYWL 70 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHH-c--CCCCEEEecCCCCCCCC-Ccc-ccCHHHHHHHHHHHHHHc------CCCCeEE
Confidence 5789999999765 5555554 4 36999999999999884 232 346677777777777655 5789999
Q ss_pred EEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 113 IGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 113 IGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
|||||||.||..++.+.++.+|.+|+.++|..
T Consensus 71 vG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 71 VGYSLGGRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred EEECHHHHHHHHHHHhCCcccccEEEEeCCCC
Confidence 99999999999998887545699999887653
No 6
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.52 E-value=7.8e-14 Score=131.82 Aligned_cols=102 Identities=12% Similarity=0.030 Sum_probs=81.9
Q ss_pred CccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccc-------cccCHHHHHHHHHHHHHHHHhhcCC
Q psy2108 36 TFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVI-------SVYNLEQVGKCVAQMIKRLSKYIGD 105 (345)
Q Consensus 36 ~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~-------a~~~~~~vg~~la~~i~~L~~~~g~ 105 (345)
+|++||+|||..+ |..+... |+ .+++||++|++|+|.|. .+. ...+....++++.++|+.+
T Consensus 29 ~~~vlllHG~~~~~~~w~~~~~~-L~-~~~~vi~~DlpG~G~S~-~~~~~~~~~~~~~~~~~~a~~l~~~l~~l------ 99 (294)
T PLN02824 29 GPALVLVHGFGGNADHWRKNTPV-LA-KSHRVYAIDLLGYGYSD-KPNPRSAPPNSFYTFETWGEQLNDFCSDV------ 99 (294)
T ss_pred CCeEEEECCCCCChhHHHHHHHH-HH-hCCeEEEEcCCCCCCCC-CCccccccccccCCHHHHHHHHHHHHHHh------
Confidence 5899999999765 5555554 44 35899999999999984 332 2467788889998888877
Q ss_pred CCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCCCC
Q psy2108 106 VEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMPMF 147 (345)
Q Consensus 106 ~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP~F 147 (345)
..++++||||||||.||..++.+.+ ++|.+|+.++|+.+.+
T Consensus 100 ~~~~~~lvGhS~Gg~va~~~a~~~p-~~v~~lili~~~~~~~ 140 (294)
T PLN02824 100 VGDPAFVICNSVGGVVGLQAAVDAP-ELVRGVMLINISLRGL 140 (294)
T ss_pred cCCCeEEEEeCHHHHHHHHHHHhCh-hheeEEEEECCCcccc
Confidence 4689999999999999999998875 8999999999975443
No 7
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.48 E-value=2.1e-13 Score=127.93 Aligned_cols=102 Identities=16% Similarity=0.164 Sum_probs=81.7
Q ss_pred CCCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCE
Q psy2108 34 QKTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDM 110 (345)
Q Consensus 34 ~~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~v 110 (345)
++.+++||+||+..+ |..+... |. .+++||++|++|+|.|. -+....+...+++++.++|+.| .++++
T Consensus 23 ~~~~plvllHG~~~~~~~w~~~~~~-L~-~~~~vi~~Dl~G~G~S~-~~~~~~~~~~~~~~~~~~i~~l------~~~~~ 93 (276)
T TIGR02240 23 EGLTPLLIFNGIGANLELVFPFIEA-LD-PDLEVIAFDVPGVGGSS-TPRHPYRFPGLAKLAARMLDYL------DYGQV 93 (276)
T ss_pred CCCCcEEEEeCCCcchHHHHHHHHH-hc-cCceEEEECCCCCCCCC-CCCCcCcHHHHHHHHHHHHHHh------CcCce
Confidence 355899999999765 4445443 54 47999999999999984 2333456778888888888877 46899
Q ss_pred EEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCC
Q psy2108 111 HLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMP 145 (345)
Q Consensus 111 hLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP 145 (345)
+||||||||.||..++.+.+ ++|++|+.++|+..
T Consensus 94 ~LvG~S~GG~va~~~a~~~p-~~v~~lvl~~~~~~ 127 (276)
T TIGR02240 94 NAIGVSWGGALAQQFAHDYP-ERCKKLILAATAAG 127 (276)
T ss_pred EEEEECHHHHHHHHHHHHCH-HHhhheEEeccCCc
Confidence 99999999999999998875 89999999999753
No 8
>PLN02965 Probable pheophorbidase
Probab=99.48 E-value=2.1e-13 Score=126.71 Aligned_cols=101 Identities=15% Similarity=0.100 Sum_probs=78.6
Q ss_pred ccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCC-CCEEE
Q psy2108 37 FTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVE-PDMHL 112 (345)
Q Consensus 37 pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~-~~vhL 112 (345)
.++||+|||..+ |..+... |+..+|+||++|++|+|.|..-.....+....++++.++|+.| +. ++++|
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~-L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~~l 76 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATL-LDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL------PPDHKVIL 76 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHH-HhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc------CCCCCEEE
Confidence 359999998643 5555554 5445799999999999988422222456777788888888776 34 59999
Q ss_pred EEecHHHHHHHHHHHHcCCCCCCeeeccCCCCC
Q psy2108 113 IGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMP 145 (345)
Q Consensus 113 IGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP 145 (345)
|||||||.||..++.+.+ ++|.+++.++++.+
T Consensus 77 vGhSmGG~ia~~~a~~~p-~~v~~lvl~~~~~~ 108 (255)
T PLN02965 77 VGHSIGGGSVTEALCKFT-DKISMAIYVAAAMV 108 (255)
T ss_pred EecCcchHHHHHHHHhCc-hheeEEEEEccccC
Confidence 999999999999998875 89999999999754
No 9
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.46 E-value=4.8e-13 Score=131.60 Aligned_cols=103 Identities=14% Similarity=0.087 Sum_probs=78.8
Q ss_pred CCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEE
Q psy2108 35 KTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMH 111 (345)
Q Consensus 35 ~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vh 111 (345)
.+|++||+|||..+ |..+.. .|.+ +|+||++|++|+|.|........+....++++.++++.| ..++++
T Consensus 87 ~gp~lvllHG~~~~~~~w~~~~~-~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l------~~~~~~ 158 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHWRRNIG-VLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV------VQKPTV 158 (360)
T ss_pred CCCeEEEECCCCCCHHHHHHHHH-HHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh------cCCCeE
Confidence 45899999999876 444444 3544 799999999999988422122456677888888887766 468999
Q ss_pred EEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCC
Q psy2108 112 LIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMP 145 (345)
Q Consensus 112 LIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP 145 (345)
||||||||.||..++....+++|.+++.++|++.
T Consensus 159 lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~ 192 (360)
T PLN02679 159 LIGNSVGSLACVIAASESTRDLVRGLVLLNCAGG 192 (360)
T ss_pred EEEECHHHHHHHHHHHhcChhhcCEEEEECCccc
Confidence 9999999999987775433489999999999754
No 10
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.46 E-value=5.6e-13 Score=122.16 Aligned_cols=101 Identities=15% Similarity=0.177 Sum_probs=79.4
Q ss_pred cCCCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCC
Q psy2108 33 RQKTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPD 109 (345)
Q Consensus 33 ~~~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~ 109 (345)
..++|++|++||+..+ +..+... |. .+++||++|++++|.+. .+ ........++++..+|+.| ..++
T Consensus 13 ~~~~~~iv~lhG~~~~~~~~~~~~~~-l~-~~~~vi~~D~~G~G~s~-~~-~~~~~~~~~~d~~~~l~~l------~~~~ 82 (255)
T PRK10673 13 PHNNSPIVLVHGLFGSLDNLGVLARD-LV-NDHDIIQVDMRNHGLSP-RD-PVMNYPAMAQDLLDTLDAL------QIEK 82 (255)
T ss_pred CCCCCCEEEECCCCCchhHHHHHHHH-Hh-hCCeEEEECCCCCCCCC-CC-CCCCHHHHHHHHHHHHHHc------CCCc
Confidence 3467999999998654 4445444 43 47999999999999874 33 3356777788888888776 4678
Q ss_pred EEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 110 MHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 110 vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
++||||||||.+|..++...+ ++|.+++.+|++.
T Consensus 83 ~~lvGhS~Gg~va~~~a~~~~-~~v~~lvli~~~~ 116 (255)
T PRK10673 83 ATFIGHSMGGKAVMALTALAP-DRIDKLVAIDIAP 116 (255)
T ss_pred eEEEEECHHHHHHHHHHHhCH-hhcceEEEEecCC
Confidence 999999999999998887764 8999999999753
No 11
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.45 E-value=5.9e-13 Score=120.07 Aligned_cols=103 Identities=14% Similarity=0.109 Sum_probs=78.8
Q ss_pred CCCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCE
Q psy2108 34 QKTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDM 110 (345)
Q Consensus 34 ~~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~v 110 (345)
+++|++|++|||+.+ |..+.. .|. .+++||++|++++|.+..-.....+....++++.++++.+ ..+++
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~-~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~------~~~~~ 82 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLD-VLT-QRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL------NIERF 82 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHH-HHH-hccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh------CCCcE
Confidence 457899999999865 334433 344 4799999999999987432223456677777887777765 46789
Q ss_pred EEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCC
Q psy2108 111 HLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMP 145 (345)
Q Consensus 111 hLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP 145 (345)
+|+||||||.+|..++...+ ++|.+++.+++...
T Consensus 83 ~l~G~S~Gg~~a~~~a~~~~-~~v~~~i~~~~~~~ 116 (257)
T TIGR03611 83 HFVGHALGGLIGLQLALRYP-ERLLSLVLINAWSR 116 (257)
T ss_pred EEEEechhHHHHHHHHHHCh-HHhHHheeecCCCC
Confidence 99999999999999887764 78999999987543
No 12
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.44 E-value=1e-12 Score=124.34 Aligned_cols=99 Identities=11% Similarity=-0.018 Sum_probs=79.9
Q ss_pred CCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEE
Q psy2108 35 KTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMH 111 (345)
Q Consensus 35 ~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vh 111 (345)
++|++||+||+..+ |..+...+ .+ +++||++|++++|.|. .+....+....++++..+++.| ..+++|
T Consensus 26 ~g~~vvllHG~~~~~~~w~~~~~~L-~~-~~~via~D~~G~G~S~-~~~~~~~~~~~a~dl~~ll~~l------~~~~~~ 96 (295)
T PRK03592 26 EGDPIVFLHGNPTSSYLWRNIIPHL-AG-LGRCLAPDLIGMGASD-KPDIDYTFADHARYLDAWFDAL------GLDDVV 96 (295)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHH-hh-CCEEEEEcCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHh------CCCCeE
Confidence 45899999998765 55555544 33 4699999999999984 4444457788888888888877 468999
Q ss_pred EEEecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 112 LIGFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 112 LIGHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
||||||||.||..++.+.+ ++|++|+.++|.
T Consensus 97 lvGhS~Gg~ia~~~a~~~p-~~v~~lil~~~~ 127 (295)
T PRK03592 97 LVGHDWGSALGFDWAARHP-DRVRGIAFMEAI 127 (295)
T ss_pred EEEECHHHHHHHHHHHhCh-hheeEEEEECCC
Confidence 9999999999999998875 899999999983
No 13
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.42 E-value=1.1e-12 Score=114.62 Aligned_cols=98 Identities=20% Similarity=0.221 Sum_probs=76.7
Q ss_pred EEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccc-cccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEE
Q psy2108 39 NVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVI-SVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIG 114 (345)
Q Consensus 39 ~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~-a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIG 114 (345)
+||+||+..+ +..+.+. |+ .+++|+++|+++++.+..... ........++++.++++.+ ..++++|||
T Consensus 1 vv~~hG~~~~~~~~~~~~~~-l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~------~~~~~~lvG 72 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEA-LA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL------GIKKVILVG 72 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHH-HH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT------TTSSEEEEE
T ss_pred eEEECCCCCCHHHHHHHHHH-Hh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc------ccccccccc
Confidence 6899998754 6667665 45 699999999999998853221 2456677777777777766 348999999
Q ss_pred ecHHHHHHHHHHHHcCCCCCCeeeccCCCCC
Q psy2108 115 FSLGAHVAAYTSKYLRPYKLPRITGLDPAMP 145 (345)
Q Consensus 115 HSLGAhVAg~ag~~~~~~~v~rItgLDPAgP 145 (345)
||+||.+|..++.+.+ ++|.+++.++|...
T Consensus 73 ~S~Gg~~a~~~a~~~p-~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 73 HSMGGMIALRLAARYP-DRVKGLVLLSPPPP 102 (228)
T ss_dssp ETHHHHHHHHHHHHSG-GGEEEEEEESESSS
T ss_pred cccccccccccccccc-cccccceeeccccc
Confidence 9999999999998875 79999999999864
No 14
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.41 E-value=1.2e-12 Score=121.98 Aligned_cols=101 Identities=14% Similarity=0.119 Sum_probs=72.8
Q ss_pred CCccEEEEcCCCCC---hHHH---HHHHhhcCCeEEEEEcCCCCcCCCCcccc-ccCHHHHHHHHHHHHHHHHhhcCCCC
Q psy2108 35 KTFTNVIYHLMSIS---IFFI---STEYFKRGDYNVWFVNWPELCRGPCYVIS-VYNLEQVGKCVAQMIKRLSKYIGDVE 107 (345)
Q Consensus 35 ~~pt~vliHG~~~s---~~~l---~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a-~~~~~~vg~~la~~i~~L~~~~g~~~ 107 (345)
+.|++||+|||..+ |..+ ...++ ..+|+|+++|++++|.|. .+.. .......++++.++++.+ +.
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~~~~~~l~-~~~~~vi~~D~~G~G~S~-~~~~~~~~~~~~~~~l~~~l~~l------~~ 100 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYYRNIGPFV-DAGYRVILKDSPGFNKSD-AVVMDEQRGLVNARAVKGLMDAL------DI 100 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHHHHHHHHH-hCCCEEEEECCCCCCCCC-CCcCcccccchhHHHHHHHHHHc------CC
Confidence 45789999998643 2221 22233 457999999999999984 2211 111123456666666655 57
Q ss_pred CCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 108 PDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 108 ~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
++++++||||||.||..++.+.+ ++|.+++.++|++
T Consensus 101 ~~~~lvG~S~Gg~ia~~~a~~~p-~~v~~lvl~~~~~ 136 (282)
T TIGR03343 101 EKAHLVGNSMGGATALNFALEYP-DRIGKLILMGPGG 136 (282)
T ss_pred CCeeEEEECchHHHHHHHHHhCh-HhhceEEEECCCC
Confidence 89999999999999998888774 8999999999874
No 15
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.41 E-value=1.6e-12 Score=123.51 Aligned_cols=99 Identities=6% Similarity=0.002 Sum_probs=75.7
Q ss_pred CCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccc-cccCHHHHHHHHHHHHHHHHhhcCCCCCCE
Q psy2108 35 KTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVI-SVYNLEQVGKCVAQMIKRLSKYIGDVEPDM 110 (345)
Q Consensus 35 ~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~-a~~~~~~vg~~la~~i~~L~~~~g~~~~~v 110 (345)
++|++||+||+..+ |..+... |. .+|+||++|++++|.|. .+. ........++++.++++.+ +.+++
T Consensus 33 ~~~~iv~lHG~~~~~~~~~~~~~~-l~-~~~~vi~~D~~G~G~S~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 103 (286)
T PRK03204 33 TGPPILLCHGNPTWSFLYRDIIVA-LR-DRFRCVAPDYLGFGLSE-RPSGFGYQIDEHARVIGEFVDHL------GLDRY 103 (286)
T ss_pred CCCEEEEECCCCccHHHHHHHHHH-Hh-CCcEEEEECCCCCCCCC-CCCccccCHHHHHHHHHHHHHHh------CCCCE
Confidence 35899999999765 4445544 54 36999999999999874 322 2345566677777776665 46889
Q ss_pred EEEEecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 111 HLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 111 hLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
+|+||||||.||..++...+ ++|++++.++|.
T Consensus 104 ~lvG~S~Gg~va~~~a~~~p-~~v~~lvl~~~~ 135 (286)
T PRK03204 104 LSMGQDWGGPISMAVAVERA-DRVRGVVLGNTW 135 (286)
T ss_pred EEEEECccHHHHHHHHHhCh-hheeEEEEECcc
Confidence 99999999999998887764 899999988875
No 16
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.41 E-value=1.9e-12 Score=124.82 Aligned_cols=108 Identities=9% Similarity=0.001 Sum_probs=81.3
Q ss_pred CCccEEEEcCCCCC----hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCE
Q psy2108 35 KTFTNVIYHLMSIS----IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDM 110 (345)
Q Consensus 35 ~~pt~vliHG~~~s----~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~v 110 (345)
.++++||+||++.+ +..+.. .|...+|+|+++|++|+|.|..............+++..+++.|.........++
T Consensus 58 ~~~~VvllHG~~~~~~~~~~~~~~-~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i 136 (330)
T PLN02298 58 PRALIFMVHGYGNDISWTFQSTAI-FLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPR 136 (330)
T ss_pred CceEEEEEcCCCCCcceehhHHHH-HHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCE
Confidence 45779999999642 223333 3556689999999999998842222234677788999999999965322334579
Q ss_pred EEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 111 HLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 111 hLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
+|+||||||.+|..++...+ ++|++++.+.|..
T Consensus 137 ~l~GhSmGG~ia~~~a~~~p-~~v~~lvl~~~~~ 169 (330)
T PLN02298 137 FLYGESMGGAICLLIHLANP-EGFDGAVLVAPMC 169 (330)
T ss_pred EEEEecchhHHHHHHHhcCc-ccceeEEEecccc
Confidence 99999999999998887664 7899999999864
No 17
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.40 E-value=2e-12 Score=122.57 Aligned_cols=104 Identities=15% Similarity=0.132 Sum_probs=77.4
Q ss_pred CCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEE
Q psy2108 35 KTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMH 111 (345)
Q Consensus 35 ~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vh 111 (345)
++|++||+||+..+ |..+.. +|+..+|+|+++|+++++.+..-+....+....++++.++|+.+ + ..++++
T Consensus 17 ~~p~vvliHG~~~~~~~w~~~~~-~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l----~-~~~~v~ 90 (273)
T PLN02211 17 QPPHFVLIHGISGGSWCWYKIRC-LMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSL----P-ENEKVI 90 (273)
T ss_pred CCCeEEEECCCCCCcCcHHHHHH-HHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhc----C-CCCCEE
Confidence 56899999997542 666655 45556899999999999976322222356666666776666654 1 247999
Q ss_pred EEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCC
Q psy2108 112 LIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMP 145 (345)
Q Consensus 112 LIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP 145 (345)
||||||||.++..++...+ ++|.+++.+++..+
T Consensus 91 lvGhS~GG~v~~~~a~~~p-~~v~~lv~~~~~~~ 123 (273)
T PLN02211 91 LVGHSAGGLSVTQAIHRFP-KKICLAVYVAATML 123 (273)
T ss_pred EEEECchHHHHHHHHHhCh-hheeEEEEeccccC
Confidence 9999999999999988764 89999999987543
No 18
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.39 E-value=3.9e-12 Score=116.14 Aligned_cols=103 Identities=12% Similarity=-0.016 Sum_probs=76.5
Q ss_pred CCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCcccc--ccCHHHHHHHHHHHHHHHHhhcCCCCCC
Q psy2108 35 KTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVIS--VYNLEQVGKCVAQMIKRLSKYIGDVEPD 109 (345)
Q Consensus 35 ~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a--~~~~~~vg~~la~~i~~L~~~~g~~~~~ 109 (345)
+++++|++||+..+ +......++...+++||++|+++++.+..-... ..++..+++++..+++.+ ..++
T Consensus 24 ~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 97 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKL------GLDK 97 (288)
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHc------CCCc
Confidence 36889999997432 333334456555899999999999987421111 245677777777766655 4678
Q ss_pred EEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 110 MHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 110 vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
++||||||||.+|..++...+ ++|.+++.++|+.
T Consensus 98 ~~liG~S~Gg~ia~~~a~~~p-~~v~~lvl~~~~~ 131 (288)
T TIGR01250 98 FYLLGHSWGGMLAQEYALKYG-QHLKGLIISSMLD 131 (288)
T ss_pred EEEEEeehHHHHHHHHHHhCc-cccceeeEecccc
Confidence 999999999999999988774 8999999988864
No 19
>PLN02578 hydrolase
Probab=99.39 E-value=2.9e-12 Score=125.57 Aligned_cols=101 Identities=20% Similarity=0.192 Sum_probs=80.1
Q ss_pred CCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEE
Q psy2108 35 KTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMH 111 (345)
Q Consensus 35 ~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vh 111 (345)
++|++||+||++.+ |..+... |. .+|+|+++|++++|.|. -+....+....++++.++++.+ ..++++
T Consensus 85 ~g~~vvliHG~~~~~~~w~~~~~~-l~-~~~~v~~~D~~G~G~S~-~~~~~~~~~~~a~~l~~~i~~~------~~~~~~ 155 (354)
T PLN02578 85 EGLPIVLIHGFGASAFHWRYNIPE-LA-KKYKVYALDLLGFGWSD-KALIEYDAMVWRDQVADFVKEV------VKEPAV 155 (354)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHH-Hh-cCCEEEEECCCCCCCCC-CcccccCHHHHHHHHHHHHHHh------ccCCeE
Confidence 56889999999765 4444444 43 36999999999999874 3333456677778888887776 357899
Q ss_pred EEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCC
Q psy2108 112 LIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMP 145 (345)
Q Consensus 112 LIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP 145 (345)
+|||||||.||..++.+.+ ++|++++.++|+++
T Consensus 156 lvG~S~Gg~ia~~~A~~~p-~~v~~lvLv~~~~~ 188 (354)
T PLN02578 156 LVGNSLGGFTALSTAVGYP-ELVAGVALLNSAGQ 188 (354)
T ss_pred EEEECHHHHHHHHHHHhCh-HhcceEEEECCCcc
Confidence 9999999999999998875 89999999999865
No 20
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.39 E-value=2.7e-12 Score=118.60 Aligned_cols=92 Identities=15% Similarity=0.255 Sum_probs=67.8
Q ss_pred ccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEE
Q psy2108 37 FTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLI 113 (345)
Q Consensus 37 pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLI 113 (345)
|++||||||..+ |..+..+ |. .+|+|+++|++++|.|..+. ..+...+++ .+.+. ..++++||
T Consensus 14 ~~ivllHG~~~~~~~w~~~~~~-L~-~~~~vi~~Dl~G~G~S~~~~--~~~~~~~~~-------~l~~~---~~~~~~lv 79 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRCIDEE-LS-SHFTLHLVDLPGFGRSRGFG--ALSLADMAE-------AVLQQ---APDKAIWL 79 (256)
T ss_pred CeEEEECCCCCChhHHHHHHHH-Hh-cCCEEEEecCCCCCCCCCCC--CCCHHHHHH-------HHHhc---CCCCeEEE
Confidence 569999999765 4445454 44 46999999999999885332 234333322 22222 36899999
Q ss_pred EecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 114 GFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 114 GHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
||||||.||..++...+ ++|++++.++|+
T Consensus 80 GhS~Gg~ia~~~a~~~p-~~v~~lili~~~ 108 (256)
T PRK10349 80 GWSLGGLVASQIALTHP-ERVQALVTVASS 108 (256)
T ss_pred EECHHHHHHHHHHHhCh-HhhheEEEecCc
Confidence 99999999999988764 899999999985
No 21
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.38 E-value=3.3e-12 Score=124.55 Aligned_cols=108 Identities=12% Similarity=0.068 Sum_probs=80.8
Q ss_pred CCccEEEEcCCCCC----hHHHHHHHhhcCCeEEEEEcCCCCcCCCCcccc-ccCHHHHHHHHHHHHHHHHhhcCCCCCC
Q psy2108 35 KTFTNVIYHLMSIS----IFFISTEYFKRGDYNVWFVNWPELCRGPCYVIS-VYNLEQVGKCVAQMIKRLSKYIGDVEPD 109 (345)
Q Consensus 35 ~~pt~vliHG~~~s----~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a-~~~~~~vg~~la~~i~~L~~~~g~~~~~ 109 (345)
.++++||+|||+.+ +..+... |.+.+|+|+++|++|+|.|. -+.. ..+...+.+++.++++.+......+..+
T Consensus 86 ~~~~iv~lHG~~~~~~~~~~~~~~~-l~~~g~~v~~~D~~G~G~S~-~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~ 163 (349)
T PLN02385 86 PKAAVCFCHGYGDTCTFFFEGIARK-IASSGYGVFAMDYPGFGLSE-GLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLP 163 (349)
T ss_pred CCeEEEEECCCCCccchHHHHHHHH-HHhCCCEEEEecCCCCCCCC-CCCCCcCCHHHHHHHHHHHHHHHHhccccCCCC
Confidence 45789999999653 3445444 44568999999999999884 2211 2356677788888888775432234558
Q ss_pred EEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCC
Q psy2108 110 MHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMP 145 (345)
Q Consensus 110 vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP 145 (345)
++|+||||||.||..++.+.+ ++|.+++.++|+..
T Consensus 164 ~~LvGhSmGG~val~~a~~~p-~~v~glVLi~p~~~ 198 (349)
T PLN02385 164 SFLFGQSMGGAVALKVHLKQP-NAWDGAILVAPMCK 198 (349)
T ss_pred EEEEEeccchHHHHHHHHhCc-chhhheeEeccccc
Confidence 999999999999999888764 89999999998753
No 22
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.37 E-value=2.7e-12 Score=114.25 Aligned_cols=101 Identities=13% Similarity=0.050 Sum_probs=78.1
Q ss_pred CCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEE
Q psy2108 35 KTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMH 111 (345)
Q Consensus 35 ~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vh 111 (345)
++|++|++||++.+ +..+.+ +|. .+++|+++|++++|.+. .+....+....++++.++++.+ +.++++
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~-~l~-~~~~v~~~d~~G~G~s~-~~~~~~~~~~~~~~~~~~i~~~------~~~~v~ 82 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLP-ALT-PDFRVLRYDKRGHGLSD-APEGPYSIEDLADDVLALLDHL------GIERAV 82 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHH-Hhh-cccEEEEecCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHh------CCCceE
Confidence 57899999998754 444444 454 57999999999999874 3333446777777777777766 467899
Q ss_pred EEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCC
Q psy2108 112 LIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMP 145 (345)
Q Consensus 112 LIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP 145 (345)
|+||||||.+|..++...+ ++|.+++.++|+..
T Consensus 83 liG~S~Gg~~a~~~a~~~p-~~v~~li~~~~~~~ 115 (251)
T TIGR02427 83 FCGLSLGGLIAQGLAARRP-DRVRALVLSNTAAK 115 (251)
T ss_pred EEEeCchHHHHHHHHHHCH-HHhHHHhhccCccc
Confidence 9999999999998887754 78999999998643
No 23
>PHA02857 monoglyceride lipase; Provisional
Probab=99.37 E-value=6.6e-12 Score=117.27 Aligned_cols=106 Identities=11% Similarity=0.016 Sum_probs=75.3
Q ss_pred CCCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCE
Q psy2108 34 QKTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDM 110 (345)
Q Consensus 34 ~~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~v 110 (345)
..++.++++||+..+ +..+.+. |.+.+++|+++|++|+|.|..............+++.+.++.+.+. .+.+++
T Consensus 23 ~~~~~v~llHG~~~~~~~~~~~~~~-l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~--~~~~~~ 99 (276)
T PHA02857 23 YPKALVFISHGAGEHSGRYEELAEN-ISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKST--YPGVPV 99 (276)
T ss_pred CCCEEEEEeCCCccccchHHHHHHH-HHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhh--CCCCCE
Confidence 345667777999653 6666664 5556899999999999987533222333333445555555555432 245689
Q ss_pred EEEEecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 111 HLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 111 hLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
+|+||||||.||..++...+ ++|++|+.++|.
T Consensus 100 ~lvG~S~GG~ia~~~a~~~p-~~i~~lil~~p~ 131 (276)
T PHA02857 100 FLLGHSMGATISILAAYKNP-NLFTAMILMSPL 131 (276)
T ss_pred EEEEcCchHHHHHHHHHhCc-cccceEEEeccc
Confidence 99999999999998887764 789999999985
No 24
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.36 E-value=6.4e-12 Score=115.75 Aligned_cols=102 Identities=14% Similarity=0.043 Sum_probs=77.6
Q ss_pred CCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEE
Q psy2108 35 KTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMH 111 (345)
Q Consensus 35 ~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vh 111 (345)
++|++|++||++.+ +..+... |++ +++|+++|++++|.+..-.....+....++++.++++.+ ..++++
T Consensus 27 ~~~~vv~~hG~~~~~~~~~~~~~~-l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~------~~~~~~ 98 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSWRDLMPP-LAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE------GLSPDG 98 (278)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHH-Hhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc------CCCCce
Confidence 46899999999765 4445443 443 699999999999987421111346677777777776654 457899
Q ss_pred EEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCC
Q psy2108 112 LIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMP 145 (345)
Q Consensus 112 LIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP 145 (345)
||||||||.+|..++...+ .++.+++.++++..
T Consensus 99 lvG~S~Gg~~a~~~a~~~p-~~v~~~v~~~~~~~ 131 (278)
T TIGR03056 99 VIGHSAGAAIALRLALDGP-VTPRMVVGINAALM 131 (278)
T ss_pred EEEECccHHHHHHHHHhCC-cccceEEEEcCccc
Confidence 9999999999999998775 78999999998643
No 25
>PRK10749 lysophospholipase L2; Provisional
Probab=99.34 E-value=1.1e-11 Score=120.22 Aligned_cols=107 Identities=12% Similarity=0.024 Sum_probs=80.9
Q ss_pred CCCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccc-----cccCHHHHHHHHHHHHHHHHhhcCC
Q psy2108 34 QKTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVI-----SVYNLEQVGKCVAQMIKRLSKYIGD 105 (345)
Q Consensus 34 ~~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~-----a~~~~~~vg~~la~~i~~L~~~~g~ 105 (345)
..++++||+||+..+ +..+...++ ..+++|+++|++|+|.|..... ...+.....+++..+++.+... .
T Consensus 52 ~~~~~vll~HG~~~~~~~y~~~~~~l~-~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~ 128 (330)
T PRK10749 52 HHDRVVVICPGRIESYVKYAELAYDLF-HLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQP--G 128 (330)
T ss_pred CCCcEEEEECCccchHHHHHHHHHHHH-HCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhc--C
Confidence 345789999999765 445555544 5689999999999998842211 1135677788888888876543 2
Q ss_pred CCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 106 VEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 106 ~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
+..+++|+||||||.||..++...+ +++++++.+.|+.
T Consensus 129 ~~~~~~l~GhSmGG~ia~~~a~~~p-~~v~~lvl~~p~~ 166 (330)
T PRK10749 129 PYRKRYALAHSMGGAILTLFLQRHP-GVFDAIALCAPMF 166 (330)
T ss_pred CCCCeEEEEEcHHHHHHHHHHHhCC-CCcceEEEECchh
Confidence 5689999999999999987777664 8999999999874
No 26
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.34 E-value=9.4e-12 Score=110.29 Aligned_cols=101 Identities=13% Similarity=0.111 Sum_probs=71.1
Q ss_pred CccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccc-cccCHHHHHHHHHHHHHHHHhhcCCCCCCEE
Q psy2108 36 TFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVI-SVYNLEQVGKCVAQMIKRLSKYIGDVEPDMH 111 (345)
Q Consensus 36 ~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~-a~~~~~~vg~~la~~i~~L~~~~g~~~~~vh 111 (345)
+|++|++||+..+ +..+.+ .|. .+++|+++|+++++.+..... .........++ ++..+.+. ++.++++
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~-~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~ 73 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIE-LLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQD---ILATLLDQ--LGIEPFF 73 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHH-Hhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHH---HHHHHHHH--cCCCeEE
Confidence 4789999998765 445544 354 589999999999998742211 12233333333 23333332 2568999
Q ss_pred EEEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 112 LIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 112 LIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
|+||||||++|..++.+.+ ++|.+++.++|..
T Consensus 74 l~G~S~Gg~ia~~~a~~~~-~~v~~lil~~~~~ 105 (251)
T TIGR03695 74 LVGYSMGGRIALYYALQYP-ERVQGLILESGSP 105 (251)
T ss_pred EEEeccHHHHHHHHHHhCc-hheeeeEEecCCC
Confidence 9999999999999988875 7899999998863
No 27
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.33 E-value=1.6e-11 Score=125.71 Aligned_cols=103 Identities=18% Similarity=0.227 Sum_probs=74.3
Q ss_pred CCCccEEEEcCCCCChHHH----HHHHh--hcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHH-HHHHHHHhhcCCC
Q psy2108 34 QKTFTNVIYHLMSISIFFI----STEYF--KRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVA-QMIKRLSKYIGDV 106 (345)
Q Consensus 34 ~~~pt~vliHG~~~s~~~l----~~a~L--~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la-~~i~~L~~~~g~~ 106 (345)
+.+|++||+|||..+...+ ...+. .+.+|+||++||+++|.++.-.......+...+++. .+++.+ +
T Consensus 199 ~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~l------g 272 (481)
T PLN03087 199 KAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERY------K 272 (481)
T ss_pred CCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHc------C
Confidence 3468999999998653322 22221 135899999999999988422222345555555553 444444 5
Q ss_pred CCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 107 EPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 107 ~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
.++++|+||||||.||..++...+ ++|.+++.++|+
T Consensus 273 ~~k~~LVGhSmGG~iAl~~A~~~P-e~V~~LVLi~~~ 308 (481)
T PLN03087 273 VKSFHIVAHSLGCILALALAVKHP-GAVKSLTLLAPP 308 (481)
T ss_pred CCCEEEEEECHHHHHHHHHHHhCh-HhccEEEEECCC
Confidence 789999999999999999888875 899999999984
No 28
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.31 E-value=1.7e-11 Score=122.39 Aligned_cols=101 Identities=11% Similarity=0.124 Sum_probs=80.9
Q ss_pred CCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCcccc----ccCHHHHHHHHHHHHHHHHhhcCCCC
Q psy2108 35 KTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVIS----VYNLEQVGKCVAQMIKRLSKYIGDVE 107 (345)
Q Consensus 35 ~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a----~~~~~~vg~~la~~i~~L~~~~g~~~ 107 (345)
++|++||||||..+ |..+... |+ .+++||++||+++|.|. -+.. ..+....+++|.++++.| ..
T Consensus 126 ~~~~ivllHG~~~~~~~w~~~~~~-L~-~~~~Via~DlpG~G~S~-~p~~~~~~~ys~~~~a~~l~~~i~~l------~~ 196 (383)
T PLN03084 126 NNPPVLLIHGFPSQAYSYRKVLPV-LS-KNYHAIAFDWLGFGFSD-KPQPGYGFNYTLDEYVSSLESLIDEL------KS 196 (383)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHH-Hh-cCCEEEEECCCCCCCCC-CCcccccccCCHHHHHHHHHHHHHHh------CC
Confidence 56899999999765 5555554 44 47999999999999874 2221 346777888888888877 46
Q ss_pred CCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCC
Q psy2108 108 PDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMP 145 (345)
Q Consensus 108 ~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP 145 (345)
++++|+|||+||.||..++...+ ++|.+++.++|+.+
T Consensus 197 ~~~~LvG~s~GG~ia~~~a~~~P-~~v~~lILi~~~~~ 233 (383)
T PLN03084 197 DKVSLVVQGYFSPPVVKYASAHP-DKIKKLILLNPPLT 233 (383)
T ss_pred CCceEEEECHHHHHHHHHHHhCh-HhhcEEEEECCCCc
Confidence 89999999999999998888775 89999999999753
No 29
>PRK06489 hypothetical protein; Provisional
Probab=99.30 E-value=1.2e-11 Score=121.47 Aligned_cols=101 Identities=11% Similarity=0.077 Sum_probs=71.3
Q ss_pred CccEEEEcCCCCChH-----HHHHHHh------hcCCeEEEEEcCCCCcCCCCcccc-------ccCHHHHHHHHHHHH-
Q psy2108 36 TFTNVIYHLMSISIF-----FISTEYF------KRGDYNVWFVNWPELCRGPCYVIS-------VYNLEQVGKCVAQMI- 96 (345)
Q Consensus 36 ~pt~vliHG~~~s~~-----~l~~a~L------~~~~~NVI~vDw~~~~~s~~Y~~a-------~~~~~~vg~~la~~i- 96 (345)
+|++||+|||..+.. .+.+.+. ...+|+||++|++|+|.|.. +.. ..++...++++..++
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~-p~~~~~~~~~~~~~~~~a~~~~~~l~ 147 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSK-PSDGLRAAFPRYDYDDMVEAQYRLVT 147 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCC-CCcCCCCCCCcccHHHHHHHHHHHHH
Confidence 689999999976532 2333221 13579999999999998742 211 234555555544432
Q ss_pred HHHHhhcCCCCCCEE-EEEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 97 KRLSKYIGDVEPDMH-LIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 97 ~~L~~~~g~~~~~vh-LIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
+.| ++++++ ||||||||.||..++.+.+ ++|.+++.++++.
T Consensus 148 ~~l------gi~~~~~lvG~SmGG~vAl~~A~~~P-~~V~~LVLi~s~~ 189 (360)
T PRK06489 148 EGL------GVKHLRLILGTSMGGMHAWMWGEKYP-DFMDALMPMASQP 189 (360)
T ss_pred Hhc------CCCceeEEEEECHHHHHHHHHHHhCc-hhhheeeeeccCc
Confidence 333 568886 8999999999999998875 8999999998863
No 30
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.29 E-value=3e-11 Score=120.98 Aligned_cols=108 Identities=15% Similarity=0.067 Sum_probs=73.4
Q ss_pred cCCCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHH-HHHHHHHHhhcCCCCC
Q psy2108 33 RQKTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCV-AQMIKRLSKYIGDVEP 108 (345)
Q Consensus 33 ~~~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~l-a~~i~~L~~~~g~~~~ 108 (345)
+.++|++||+||+..+ +....+. |.+ +|+|+++||+++|.+..............+.+ ..+.+++.. ++++
T Consensus 102 ~~~~p~vvllHG~~~~~~~~~~~~~~-L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~---l~~~ 176 (402)
T PLN02894 102 KEDAPTLVMVHGYGASQGFFFRNFDA-LAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKA---KNLS 176 (402)
T ss_pred CCCCCEEEEECCCCcchhHHHHHHHH-HHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHH---cCCC
Confidence 3467999999999764 3334443 443 69999999999998742211112222222222 222333322 2567
Q ss_pred CEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCCC
Q psy2108 109 DMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMPM 146 (345)
Q Consensus 109 ~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP~ 146 (345)
+++|+||||||.+|..++.+.+ ++|.+++.++|++..
T Consensus 177 ~~~lvGhS~GG~la~~~a~~~p-~~v~~lvl~~p~~~~ 213 (402)
T PLN02894 177 NFILLGHSFGGYVAAKYALKHP-EHVQHLILVGPAGFS 213 (402)
T ss_pred CeEEEEECHHHHHHHHHHHhCc-hhhcEEEEECCcccc
Confidence 9999999999999999888774 899999999998643
No 31
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.28 E-value=2e-11 Score=108.59 Aligned_cols=94 Identities=13% Similarity=0.208 Sum_probs=67.4
Q ss_pred CccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEE
Q psy2108 36 TFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHL 112 (345)
Q Consensus 36 ~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhL 112 (345)
.|++|++|||+.+ +..+.+ .|. .+++||++|+++++.+... ...++..+. +.+.+. ..++++|
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~-~l~-~~~~vi~~d~~G~G~s~~~--~~~~~~~~~-------~~~~~~---~~~~~~l 69 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDE-ELS-AHFTLHLVDLPGHGRSRGF--GPLSLADAA-------EAIAAQ---APDPAIW 69 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHH-hhc-cCeEEEEecCCcCccCCCC--CCcCHHHHH-------HHHHHh---CCCCeEE
Confidence 4789999999765 444544 344 4699999999999987421 122333332 223222 2368999
Q ss_pred EEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 113 IGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 113 IGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
|||||||.+|..++.+.+ ++|.+++.+++..
T Consensus 70 vG~S~Gg~~a~~~a~~~p-~~v~~~il~~~~~ 100 (245)
T TIGR01738 70 LGWSLGGLVALHIAATHP-DRVRALVTVASSP 100 (245)
T ss_pred EEEcHHHHHHHHHHHHCH-HhhheeeEecCCc
Confidence 999999999998888764 7899999999864
No 32
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.25 E-value=5.6e-11 Score=113.19 Aligned_cols=104 Identities=16% Similarity=0.147 Sum_probs=79.7
Q ss_pred CccEEEEcCCCCC-------hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCC
Q psy2108 36 TFTNVIYHLMSIS-------IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEP 108 (345)
Q Consensus 36 ~pt~vliHG~~~s-------~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~ 108 (345)
++++|++||+... +..+.+ .|.+.+|+|+++|++++|.+.... .........+++..++++|.+. +.+
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~-~La~~Gy~Vl~~Dl~G~G~S~g~~-~~~~~~~~~~Dv~~ai~~L~~~---~~~ 99 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQAR-AFAAGGFGVLQIDLYGCGDSAGDF-AAARWDVWKEDVAAAYRWLIEQ---GHP 99 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHH-HHHHCCCEEEEECCCCCCCCCCcc-ccCCHHHHHHHHHHHHHHHHhc---CCC
Confidence 5789999998642 222344 355678999999999999874222 2235566778888888888764 368
Q ss_pred CEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCC
Q psy2108 109 DMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMP 145 (345)
Q Consensus 109 ~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP 145 (345)
+++|+||||||.+|..++...+ +++.+++.++|...
T Consensus 100 ~v~LvG~SmGG~vAl~~A~~~p-~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 100 PVTLWGLRLGALLALDAANPLA-AKCNRLVLWQPVVS 135 (266)
T ss_pred CEEEEEECHHHHHHHHHHHhCc-cccceEEEeccccc
Confidence 9999999999999998887764 79999999999744
No 33
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.23 E-value=7.2e-11 Score=114.54 Aligned_cols=101 Identities=18% Similarity=0.207 Sum_probs=77.1
Q ss_pred CCCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCE
Q psy2108 34 QKTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDM 110 (345)
Q Consensus 34 ~~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~v 110 (345)
.++|++|++|||..+ +..+... |.+ +|+|+++|+++++.+. ......+...+++++.++++.+ +.+++
T Consensus 129 ~~~~~vl~~HG~~~~~~~~~~~~~~-l~~-~~~v~~~d~~g~G~s~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 199 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNWLFNHAA-LAA-GRPVIALDLPGHGASS-KAVGAGSLDELAAAVLAFLDAL------GIERA 199 (371)
T ss_pred CCCCeEEEECCCCCccchHHHHHHH-Hhc-CCEEEEEcCCCCCCCC-CCCCCCCHHHHHHHHHHHHHhc------CCccE
Confidence 346899999999765 4445443 444 5999999999999873 2223456677777777766554 56789
Q ss_pred EEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 111 HLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 111 hLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
+|+||||||.+|..++...+ .++.+++.++|.+
T Consensus 200 ~lvG~S~Gg~~a~~~a~~~~-~~v~~lv~~~~~~ 232 (371)
T PRK14875 200 HLVGHSMGGAVALRLAARAP-QRVASLTLIAPAG 232 (371)
T ss_pred EEEeechHHHHHHHHHHhCc-hheeEEEEECcCC
Confidence 99999999999998887764 7899999998864
No 34
>KOG4409|consensus
Probab=99.22 E-value=4.4e-11 Score=116.31 Aligned_cols=106 Identities=13% Similarity=0.125 Sum_probs=75.6
Q ss_pred CCCccEEEEcCCCCChHHHHHHH--hhcCCeEEEEEcCCCCcCCCCccc-cccCHHHHHHHHHHHHHHHHhh-cCCCCCC
Q psy2108 34 QKTFTNVIYHLMSISIFFISTEY--FKRGDYNVWFVNWPELCRGPCYVI-SVYNLEQVGKCVAQMIKRLSKY-IGDVEPD 109 (345)
Q Consensus 34 ~~~pt~vliHG~~~s~~~l~~a~--L~~~~~NVI~vDw~~~~~s~~Y~~-a~~~~~~vg~~la~~i~~L~~~-~g~~~~~ 109 (345)
.++.++|+|||+++....+..++ |.. ..||.++||++.|+|. -|. +...+. ..-.|++.+++- ..+++++
T Consensus 88 ~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SS-RP~F~~d~~~----~e~~fvesiE~WR~~~~L~K 161 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSS-RPKFSIDPTT----AEKEFVESIEQWRKKMGLEK 161 (365)
T ss_pred cCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCC-CCCCCCCccc----chHHHHHHHHHHHHHcCCcc
Confidence 46688999999987533222222 333 7899999999999984 221 111111 112666666531 1357899
Q ss_pred EEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCCC
Q psy2108 110 MHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMPM 146 (345)
Q Consensus 110 vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP~ 146 (345)
+.|+||||||.+|..++..++ ++|..+++.||+|--
T Consensus 162 milvGHSfGGYLaa~YAlKyP-erV~kLiLvsP~Gf~ 197 (365)
T KOG4409|consen 162 MILVGHSFGGYLAAKYALKYP-ERVEKLILVSPWGFP 197 (365)
T ss_pred eeEeeccchHHHHHHHHHhCh-HhhceEEEecccccc
Confidence 999999999999998888886 899999999999844
No 35
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.20 E-value=4.9e-11 Score=116.20 Aligned_cols=75 Identities=11% Similarity=0.110 Sum_probs=60.7
Q ss_pred CCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCC-EEEEEecHHHHHHHHHHHHcCCCCCCeee
Q psy2108 60 GDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPD-MHLIGFSLGAHVAAYTSKYLRPYKLPRIT 138 (345)
Q Consensus 60 ~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~-vhLIGHSLGAhVAg~ag~~~~~~~v~rIt 138 (345)
.+|+||++|++|++.+. . ....+...++++..+++.| .+++ ++||||||||.||..++.+.+ ++|.+++
T Consensus 98 ~~~~Vi~~Dl~G~g~s~--~-~~~~~~~~a~dl~~ll~~l------~l~~~~~lvG~SmGG~vA~~~A~~~P-~~V~~Lv 167 (343)
T PRK08775 98 ARFRLLAFDFIGADGSL--D-VPIDTADQADAIALLLDAL------GIARLHAFVGYSYGALVGLQFASRHP-ARVRTLV 167 (343)
T ss_pred cccEEEEEeCCCCCCCC--C-CCCCHHHHHHHHHHHHHHc------CCCcceEEEEECHHHHHHHHHHHHCh-HhhheEE
Confidence 47999999999998763 2 2245666788888887776 4666 479999999999999998875 8999999
Q ss_pred ccCCCC
Q psy2108 139 GLDPAM 144 (345)
Q Consensus 139 gLDPAg 144 (345)
.++++.
T Consensus 168 Li~s~~ 173 (343)
T PRK08775 168 VVSGAH 173 (343)
T ss_pred EECccc
Confidence 999974
No 36
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.17 E-value=4.2e-10 Score=112.76 Aligned_cols=107 Identities=17% Similarity=0.192 Sum_probs=78.6
Q ss_pred CCCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCE
Q psy2108 34 QKTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDM 110 (345)
Q Consensus 34 ~~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~v 110 (345)
+.++++|++||++.+ +..+.+. |.+.+|+|+++||+++|.+..-...........+++..+++.+.... +..++
T Consensus 134 ~~~~~Vl~lHG~~~~~~~~~~~a~~-L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i 210 (395)
T PLN02652 134 EMRGILIIIHGLNEHSGRYLHFAKQ-LTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSEN--PGVPC 210 (395)
T ss_pred CCceEEEEECCchHHHHHHHHHHHH-HHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhC--CCCCE
Confidence 345789999999764 4555554 44568999999999999874211112355667788999999886542 33579
Q ss_pred EEEEecHHHHHHHHHHHHcCC--CCCCeeeccCCCC
Q psy2108 111 HLIGFSLGAHVAAYTSKYLRP--YKLPRITGLDPAM 144 (345)
Q Consensus 111 hLIGHSLGAhVAg~ag~~~~~--~~v~rItgLDPAg 144 (345)
+|+||||||.+|..++.+ +. .+|..++...|+.
T Consensus 211 ~lvGhSmGG~ial~~a~~-p~~~~~v~glVL~sP~l 245 (395)
T PLN02652 211 FLFGHSTGGAVVLKAASY-PSIEDKLEGIVLTSPAL 245 (395)
T ss_pred EEEEECHHHHHHHHHHhc-cCcccccceEEEECccc
Confidence 999999999999887753 21 4799999988864
No 37
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.15 E-value=1.8e-10 Score=110.29 Aligned_cols=102 Identities=10% Similarity=-0.039 Sum_probs=74.1
Q ss_pred CCCccEEEEcCCCCC--hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccc--cccCHHHHHHHHHHHHHHHHhhcCCCCCC
Q psy2108 34 QKTFTNVIYHLMSIS--IFFISTEYFKRGDYNVWFVNWPELCRGPCYVI--SVYNLEQVGKCVAQMIKRLSKYIGDVEPD 109 (345)
Q Consensus 34 ~~~pt~vliHG~~~s--~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~--a~~~~~~vg~~la~~i~~L~~~~g~~~~~ 109 (345)
++.+++|++||+..+ ...+.. ++...+++||++|++++|.+. -+. ...+...+.+++..+++.+ ++++
T Consensus 25 ~~~~~lvllHG~~~~~~~~~~~~-~~~~~~~~vi~~D~~G~G~S~-~~~~~~~~~~~~~~~dl~~l~~~l------~~~~ 96 (306)
T TIGR01249 25 PDGKPVVFLHGGPGSGTDPGCRR-FFDPETYRIVLFDQRGCGKST-PHACLEENTTWDLVADIEKLREKL------GIKN 96 (306)
T ss_pred CCCCEEEEECCCCCCCCCHHHHh-ccCccCCEEEEECCCCCCCCC-CCCCcccCCHHHHHHHHHHHHHHc------CCCC
Confidence 446789999997543 333433 333457999999999999874 221 1234555666666666555 4688
Q ss_pred EEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 110 MHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 110 vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
++++||||||.+|..++.+.+ ++|.+++.++++.
T Consensus 97 ~~lvG~S~GG~ia~~~a~~~p-~~v~~lvl~~~~~ 130 (306)
T TIGR01249 97 WLVFGGSWGSTLALAYAQTHP-EVVTGLVLRGIFL 130 (306)
T ss_pred EEEEEECHHHHHHHHHHHHCh-Hhhhhheeecccc
Confidence 999999999999999988775 7899999998754
No 38
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.13 E-value=2.3e-10 Score=99.06 Aligned_cols=109 Identities=29% Similarity=0.429 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCC---CCCCeeeccCCCCCCCCCCCCCCCCCccccce
Q psy2108 87 QVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRP---YKLPRITGLDPAMPMFMSRDRDHRLDSEDAKF 163 (345)
Q Consensus 87 ~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~---~~v~rItgLDPAgP~F~~~~~~~rL~~~DA~f 163 (345)
.+.+.+...++..... .+..+|+++||||||+||..++..+.. .++.++++++|+.+....... ..+.+.++.+
T Consensus 9 ~~~~~i~~~~~~~~~~--~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~-~~~~~~~~~~ 85 (153)
T cd00741 9 SLANLVLPLLKSALAQ--YPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAE-DRLDPSDALF 85 (153)
T ss_pred HHHHHHHHHHHHHHHH--CCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHH-HhhhccCCcc
Confidence 3445555555444332 367899999999999999999998863 378999999999987653221 3566788999
Q ss_pred eeEEecCCCcCCcc------ccCCCcccccCCCcCCCCCCC
Q psy2108 164 VDVIHTSAFVQGQY------SRSGHVDFYMNGGIEQPGCWN 198 (345)
Q Consensus 164 VdviHT~~~~~G~~------~piGh~DfypNGG~~QPGC~~ 198 (345)
|..||+..+.++.. -..+..+||.|++..++-|..
T Consensus 86 ~~~i~~~~D~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (153)
T cd00741 86 VDRIVNDNDIVPRLPPGGEGYPHGGAEFYINGGKSQPGCCK 126 (153)
T ss_pred EEEEEECCCccCCCCCCcCCCeecceEEEECCCCCCCcccc
Confidence 99999998876665 578899999999988777654
No 39
>KOG4178|consensus
Probab=99.10 E-value=9.1e-10 Score=106.51 Aligned_cols=124 Identities=16% Similarity=0.141 Sum_probs=91.7
Q ss_pred ccCCCccEEEEcCCCCChHHHHHH--HhhcCCeEEEEEcCCCCcCCCCccc-cccCHHHHHHHHHHHHHHHHhhcCCCCC
Q psy2108 32 IRQKTFTNVIYHLMSISIFFISTE--YFKRGDYNVWFVNWPELCRGPCYVI-SVYNLEQVGKCVAQMIKRLSKYIGDVEP 108 (345)
Q Consensus 32 ~~~~~pt~vliHG~~~s~~~l~~a--~L~~~~~NVI~vDw~~~~~s~~Y~~-a~~~~~~vg~~la~~i~~L~~~~g~~~~ 108 (345)
....+|.++++||+-.+|-+++.. .|+..+|+|||+|.+|.+.|..-+. ...++..++.++..+|+.| ..+
T Consensus 40 g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~L------g~~ 113 (322)
T KOG4178|consen 40 GPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHL------GLK 113 (322)
T ss_pred cCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHh------ccc
Confidence 677889999999997654444332 2444569999999999998842222 3567788888888888888 489
Q ss_pred CEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCCCCCCCCCCCCCCccccceeeE
Q psy2108 109 DMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMPMFMSRDRDHRLDSEDAKFVDV 166 (345)
Q Consensus 109 ~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP~F~~~~~~~rL~~~DA~fVdv 166 (345)
+++|+||++||.||...+..++ ++|.+++.+.-..+ .+..++++..-|.|.+-
T Consensus 114 k~~lvgHDwGaivaw~la~~~P-erv~~lv~~nv~~~----~p~~~~~~~~~~~f~~~ 166 (322)
T KOG4178|consen 114 KAFLVGHDWGAIVAWRLALFYP-ERVDGLVTLNVPFP----NPKLKPLDSSKAIFGKS 166 (322)
T ss_pred eeEEEeccchhHHHHHHHHhCh-hhcceEEEecCCCC----CcccchhhhhccccCcc
Confidence 9999999999999999998885 89999998876655 22234444444444443
No 40
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.09 E-value=4.4e-10 Score=109.89 Aligned_cols=103 Identities=13% Similarity=0.043 Sum_probs=74.2
Q ss_pred CCccEEEEcCCCCCh--------------HHHHH--HHhhcCCeEEEEEcCCC--CcCCCC---------cc--ccccCH
Q psy2108 35 KTFTNVIYHLMSISI--------------FFIST--EYFKRGDYNVWFVNWPE--LCRGPC---------YV--ISVYNL 85 (345)
Q Consensus 35 ~~pt~vliHG~~~s~--------------~~l~~--a~L~~~~~NVI~vDw~~--~~~s~~---------Y~--~a~~~~ 85 (345)
..+++||+||++.+. ..+.. ..|...+|+||++|.+| ++.+.. |. .....+
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITI 109 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcH
Confidence 457899999987643 22221 12334689999999999 554421 10 013456
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCC-EEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 86 EQVGKCVAQMIKRLSKYIGDVEPD-MHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 86 ~~vg~~la~~i~~L~~~~g~~~~~-vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
...++++.++++.| .+++ ++|+||||||.||..++...+ ++|.+++.++++.
T Consensus 110 ~~~~~~~~~~~~~l------~~~~~~~l~G~S~Gg~ia~~~a~~~p-~~v~~lvl~~~~~ 162 (351)
T TIGR01392 110 RDDVKAQKLLLDHL------GIEQIAAVVGGSMGGMQALEWAIDYP-ERVRAIVVLATSA 162 (351)
T ss_pred HHHHHHHHHHHHHc------CCCCceEEEEECHHHHHHHHHHHHCh-HhhheEEEEccCC
Confidence 77778887777766 4678 999999999999998888775 8999999999853
No 41
>KOG1454|consensus
Probab=99.08 E-value=5.5e-10 Score=109.23 Aligned_cols=106 Identities=20% Similarity=0.184 Sum_probs=74.1
Q ss_pred CCCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccc-cCHHHHHHHHHHHHHHHHhhcCCCCCC
Q psy2108 34 QKTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISV-YNLEQVGKCVAQMIKRLSKYIGDVEPD 109 (345)
Q Consensus 34 ~~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~-~~~~~vg~~la~~i~~L~~~~g~~~~~ 109 (345)
..+|++|++|||+++ |+.....+.+..++.|.++|..|++.+...+... .+.+ +..+++..+..+ +..++
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~----~~v~~i~~~~~~--~~~~~ 129 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLR----ELVELIRRFVKE--VFVEP 129 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehh----HHHHHHHHHHHh--hcCcc
Confidence 578999999999865 5555554433335899999999998443444332 2333 333344444333 24677
Q ss_pred EEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCCC
Q psy2108 110 MHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMPM 146 (345)
Q Consensus 110 vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP~ 146 (345)
++|+||||||.+|..++..++ +.|+.+++||-.+|.
T Consensus 130 ~~lvghS~Gg~va~~~Aa~~P-~~V~~lv~~~~~~~~ 165 (326)
T KOG1454|consen 130 VSLVGHSLGGIVALKAAAYYP-ETVDSLVLLDLLGPP 165 (326)
T ss_pred eEEEEeCcHHHHHHHHHHhCc-ccccceeeecccccc
Confidence 999999999999999999886 999999988744433
No 42
>PRK07581 hypothetical protein; Validated
Probab=99.07 E-value=3.4e-10 Score=109.65 Aligned_cols=105 Identities=10% Similarity=-0.011 Sum_probs=68.0
Q ss_pred CccEEEEcCCCCC---hHHHHH--HHhhcCCeEEEEEcCCCCcCCCCcccc---ccC-----HHHHHHHHHHHHHHHHhh
Q psy2108 36 TFTNVIYHLMSIS---IFFIST--EYFKRGDYNVWFVNWPELCRGPCYVIS---VYN-----LEQVGKCVAQMIKRLSKY 102 (345)
Q Consensus 36 ~pt~vliHG~~~s---~~~l~~--a~L~~~~~NVI~vDw~~~~~s~~Y~~a---~~~-----~~~vg~~la~~i~~L~~~ 102 (345)
.|++|++||++.+ +..+.. ..|...+|+||++|++|+|.|. .+.. ... ...++++++.....|.+.
T Consensus 41 ~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 119 (339)
T PRK07581 41 DNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSS-SPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK 119 (339)
T ss_pred CCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCC-CCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH
Confidence 3456666665532 221110 1243457999999999999884 2211 111 122456666544434333
Q ss_pred cCCCCCC-EEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 103 IGDVEPD-MHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 103 ~g~~~~~-vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
. .+++ ++||||||||.||..++.+.+ ++|.+++.++.+.
T Consensus 120 l--gi~~~~~lvG~S~GG~va~~~a~~~P-~~V~~Lvli~~~~ 159 (339)
T PRK07581 120 F--GIERLALVVGWSMGAQQTYHWAVRYP-DMVERAAPIAGTA 159 (339)
T ss_pred h--CCCceEEEEEeCHHHHHHHHHHHHCH-HHHhhheeeecCC
Confidence 2 5689 589999999999999999886 8999999998754
No 43
>PLN02511 hydrolase
Probab=99.05 E-value=1.2e-09 Score=108.95 Aligned_cols=104 Identities=11% Similarity=0.055 Sum_probs=72.1
Q ss_pred CCCccEEEEcCCCCC-----hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCC
Q psy2108 34 QKTFTNVIYHLMSIS-----IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEP 108 (345)
Q Consensus 34 ~~~pt~vliHG~~~s-----~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~ 108 (345)
.++|++|++||+..+ +..+...++ ..+|+||++|++++|.++.. ..........+++.+++++|...+ +..
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~-~~g~~vv~~d~rG~G~s~~~-~~~~~~~~~~~Dl~~~i~~l~~~~--~~~ 173 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRAR-SKGWRVVVFNSRGCADSPVT-TPQFYSASFTGDLRQVVDHVAGRY--PSA 173 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHH-HCCCEEEEEecCCCCCCCCC-CcCEEcCCchHHHHHHHHHHHHHC--CCC
Confidence 467899999999532 233444444 46899999999999987432 111112234578888899987642 456
Q ss_pred CEEEEEecHHHHHHHHHHHHcCCCC--CCeeeccCC
Q psy2108 109 DMHLIGFSLGAHVAAYTSKYLRPYK--LPRITGLDP 142 (345)
Q Consensus 109 ~vhLIGHSLGAhVAg~ag~~~~~~~--v~rItgLDP 142 (345)
++++|||||||.|+..+....+ ++ |.+++.+.+
T Consensus 174 ~~~lvG~SlGg~i~~~yl~~~~-~~~~v~~~v~is~ 208 (388)
T PLN02511 174 NLYAAGWSLGANILVNYLGEEG-ENCPLSGAVSLCN 208 (388)
T ss_pred CEEEEEechhHHHHHHHHHhcC-CCCCceEEEEECC
Confidence 8999999999999987766554 44 677666643
No 44
>PRK11071 esterase YqiA; Provisional
Probab=99.04 E-value=1.1e-09 Score=98.75 Aligned_cols=87 Identities=16% Similarity=0.185 Sum_probs=60.1
Q ss_pred ccEEEEcCCCCChHHHH----HHHhhc--CCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCE
Q psy2108 37 FTNVIYHLMSISIFFIS----TEYFKR--GDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDM 110 (345)
Q Consensus 37 pt~vliHG~~~s~~~l~----~a~L~~--~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~v 110 (345)
|++|++|||.++...++ ..++.+ .+++|+++|+++++ ...++.+.++++.+ ..+++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~------~~~~~ 63 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEH------GGDPL 63 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHc------CCCCe
Confidence 68999999976633322 234533 37999999999752 12334444444332 46799
Q ss_pred EEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCC
Q psy2108 111 HLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMP 145 (345)
Q Consensus 111 hLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP 145 (345)
+|+||||||.+|..++...+ . +++.++|+..
T Consensus 64 ~lvG~S~Gg~~a~~~a~~~~-~---~~vl~~~~~~ 94 (190)
T PRK11071 64 GLVGSSLGGYYATWLSQCFM-L---PAVVVNPAVR 94 (190)
T ss_pred EEEEECHHHHHHHHHHHHcC-C---CEEEECCCCC
Confidence 99999999999999988764 2 5678888643
No 45
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.04 E-value=1.3e-09 Score=108.07 Aligned_cols=103 Identities=12% Similarity=0.010 Sum_probs=74.6
Q ss_pred CCccEEEEcCCCCChHH----------------HH---HHHhhcCCeEEEEEcCCCC--cCCC-C--ccc---------c
Q psy2108 35 KTFTNVIYHLMSISIFF----------------IS---TEYFKRGDYNVWFVNWPEL--CRGP-C--YVI---------S 81 (345)
Q Consensus 35 ~~pt~vliHG~~~s~~~----------------l~---~a~L~~~~~NVI~vDw~~~--~~s~-~--Y~~---------a 81 (345)
.+|++||+||++.+... +. .+++ ..+|+||++|++++ +.+. . .+. .
T Consensus 47 ~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~-~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~ 125 (379)
T PRK00175 47 RSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPID-TDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFP 125 (379)
T ss_pred CCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccC-ccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCC
Confidence 36899999999765432 21 1222 45899999999873 2221 0 000 1
Q ss_pred ccCHHHHHHHHHHHHHHHHhhcCCCCCC-EEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCC
Q psy2108 82 VYNLEQVGKCVAQMIKRLSKYIGDVEPD-MHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMP 145 (345)
Q Consensus 82 ~~~~~~vg~~la~~i~~L~~~~g~~~~~-vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP 145 (345)
..++...++++.++++.| ++++ ++|+||||||.||..++...+ ++|.+++.+|++.+
T Consensus 126 ~~~~~~~~~~~~~~l~~l------~~~~~~~lvG~S~Gg~ia~~~a~~~p-~~v~~lvl~~~~~~ 183 (379)
T PRK00175 126 VITIRDWVRAQARLLDAL------GITRLAAVVGGSMGGMQALEWAIDYP-DRVRSALVIASSAR 183 (379)
T ss_pred cCCHHHHHHHHHHHHHHh------CCCCceEEEEECHHHHHHHHHHHhCh-HhhhEEEEECCCcc
Confidence 346777888888888776 5678 599999999999998888875 89999999998764
No 46
>PRK10566 esterase; Provisional
Probab=99.04 E-value=1.9e-09 Score=99.15 Aligned_cols=94 Identities=13% Similarity=0.000 Sum_probs=65.6
Q ss_pred CCCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCH-------HHHHHHHHHHHHHHHhhc
Q psy2108 34 QKTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNL-------EQVGKCVAQMIKRLSKYI 103 (345)
Q Consensus 34 ~~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~-------~~vg~~la~~i~~L~~~~ 103 (345)
.+.|++|++||+..+ +..+.+ .|.+.||+|+++|+++++.+. ........ ....+++..++++|.+..
T Consensus 25 ~~~p~vv~~HG~~~~~~~~~~~~~-~l~~~G~~v~~~d~~g~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 102 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLVYSYFAV-ALAQAGFRVIMPDAPMHGARF-SGDEARRLNHFWQILLQNMQEFPTLRAAIREEG 102 (249)
T ss_pred CCCCEEEEeCCCCcccchHHHHHH-HHHhCCCEEEEecCCcccccC-CCccccchhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 346899999998654 444444 455669999999999987641 11111111 122356677788887654
Q ss_pred CCCCCCEEEEEecHHHHHHHHHHHHc
Q psy2108 104 GDVEPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 104 g~~~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
.++.++|+++||||||++|..++...
T Consensus 103 ~~~~~~i~v~G~S~Gg~~al~~~~~~ 128 (249)
T PRK10566 103 WLLDDRLAVGGASMGGMTALGIMARH 128 (249)
T ss_pred CcCccceeEEeecccHHHHHHHHHhC
Confidence 46789999999999999999888764
No 47
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.04 E-value=1.7e-09 Score=90.60 Aligned_cols=90 Identities=18% Similarity=0.184 Sum_probs=67.7
Q ss_pred cEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEE
Q psy2108 38 TNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIG 114 (345)
Q Consensus 38 t~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIG 114 (345)
++|++||++.+ +..+.+.+. +.+++|+.+|+++.+.+.. ...+.++++.+.+... +.+++.|+|
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~-~~G~~v~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~-~~~~i~l~G 67 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALA-EQGYAVVAFDYPGHGDSDG-----------ADAVERVLADIRAGYP-DPDRIILIG 67 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHH-HTTEEEEEESCTTSTTSHH-----------SHHHHHHHHHHHHHHC-TCCEEEEEE
T ss_pred CEEEECCCCCCHHHHHHHHHHHH-HCCCEEEEEecCCCCccch-----------hHHHHHHHHHHHhhcC-CCCcEEEEE
Confidence 58999999866 444555444 4599999999998866511 1255555665533223 789999999
Q ss_pred ecHHHHHHHHHHHHcCCCCCCeeeccCC
Q psy2108 115 FSLGAHVAAYTSKYLRPYKLPRITGLDP 142 (345)
Q Consensus 115 HSLGAhVAg~ag~~~~~~~v~rItgLDP 142 (345)
|||||.+|..++... .+++.++.+.|
T Consensus 68 ~S~Gg~~a~~~~~~~--~~v~~~v~~~~ 93 (145)
T PF12695_consen 68 HSMGGAIAANLAARN--PRVKAVVLLSP 93 (145)
T ss_dssp ETHHHHHHHHHHHHS--TTESEEEEESE
T ss_pred EccCcHHHHHHhhhc--cceeEEEEecC
Confidence 999999999988764 59999999999
No 48
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.04 E-value=2e-09 Score=103.96 Aligned_cols=104 Identities=13% Similarity=0.150 Sum_probs=76.5
Q ss_pred ccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCC-CccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEE
Q psy2108 37 FTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGP-CYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHL 112 (345)
Q Consensus 37 pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~-~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhL 112 (345)
.++|++||.... ...+++.+ ...||.|++.||+|+|.|. .-.-.......+-.++..+++.+... .+..+++|
T Consensus 35 g~Vvl~HG~~Eh~~ry~~la~~l-~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~--~~~~p~~l 111 (298)
T COG2267 35 GVVVLVHGLGEHSGRYEELADDL-AARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEP--DPGLPVFL 111 (298)
T ss_pred cEEEEecCchHHHHHHHHHHHHH-HhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhcc--CCCCCeEE
Confidence 689999999865 45566654 4679999999999999984 12212223444555666666655432 25689999
Q ss_pred EEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 113 IGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 113 IGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
+||||||-||..+....+ .+|.++++..|+-
T Consensus 112 ~gHSmGg~Ia~~~~~~~~-~~i~~~vLssP~~ 142 (298)
T COG2267 112 LGHSMGGLIALLYLARYP-PRIDGLVLSSPAL 142 (298)
T ss_pred EEeCcHHHHHHHHHHhCC-ccccEEEEECccc
Confidence 999999999999988875 7899999888763
No 49
>KOG2564|consensus
Probab=99.03 E-value=8.9e-10 Score=104.46 Aligned_cols=108 Identities=18% Similarity=0.162 Sum_probs=81.2
Q ss_pred cCCCccEEEEcCCCC---ChHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCC
Q psy2108 33 RQKTFTNVIYHLMSI---SIFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPD 109 (345)
Q Consensus 33 ~~~~pt~vliHG~~~---s~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~ 109 (345)
.+.+|.+++.||.+. +|..++.++..+-..+|+++|+++||.+..-.......+..++++..+|+.|. |-.+.+
T Consensus 71 ~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~f---ge~~~~ 147 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELF---GELPPQ 147 (343)
T ss_pred CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHh---ccCCCc
Confidence 346688999999865 47778888877778899999999999986444445677778889988888774 346889
Q ss_pred EEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 110 MHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 110 vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
|.||||||||.||.+.+..-.-..+..|+-+|-.
T Consensus 148 iilVGHSmGGaIav~~a~~k~lpsl~Gl~viDVV 181 (343)
T KOG2564|consen 148 IILVGHSMGGAIAVHTAASKTLPSLAGLVVIDVV 181 (343)
T ss_pred eEEEeccccchhhhhhhhhhhchhhhceEEEEEe
Confidence 9999999999999877653111236666666643
No 50
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.01 E-value=1.8e-09 Score=124.69 Aligned_cols=101 Identities=15% Similarity=0.192 Sum_probs=78.0
Q ss_pred CCCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCcc-------ccccCHHHHHHHHHHHHHHHHhhc
Q psy2108 34 QKTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYV-------ISVYNLEQVGKCVAQMIKRLSKYI 103 (345)
Q Consensus 34 ~~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~-------~a~~~~~~vg~~la~~i~~L~~~~ 103 (345)
.++|++||+|||+.+ |..+... |. .+++||++|++++|.+..-. ....++..+++++.++++.|
T Consensus 1369 ~~~~~vVllHG~~~s~~~w~~~~~~-L~-~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l---- 1442 (1655)
T PLN02980 1369 AEGSVVLFLHGFLGTGEDWIPIMKA-IS-GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI---- 1442 (1655)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHH-Hh-CCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh----
Confidence 356899999999765 4444443 43 46999999999999874211 11345777788888777766
Q ss_pred CCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 104 GDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 104 g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
..++++|+||||||.||..++.+.+ ++|++++.+++.
T Consensus 1443 --~~~~v~LvGhSmGG~iAl~~A~~~P-~~V~~lVlis~~ 1479 (1655)
T PLN02980 1443 --TPGKVTLVGYSMGARIALYMALRFS-DKIEGAVIISGS 1479 (1655)
T ss_pred --CCCCEEEEEECHHHHHHHHHHHhCh-HhhCEEEEECCC
Confidence 4689999999999999999988875 899999999875
No 51
>PLN00021 chlorophyllase
Probab=99.01 E-value=2.8e-09 Score=103.73 Aligned_cols=101 Identities=18% Similarity=0.074 Sum_probs=68.7
Q ss_pred CCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhh--------c
Q psy2108 35 KTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKY--------I 103 (345)
Q Consensus 35 ~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~--------~ 103 (345)
+.|++|++|||... +..+... |...++.|+++|+.+.+.. ... ..+ ++..++++|+.+. .
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~-Las~G~~VvapD~~g~~~~-~~~---~~i----~d~~~~~~~l~~~l~~~l~~~~ 121 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQH-IASHGFIVVAPQLYTLAGP-DGT---DEI----KDAAAVINWLSSGLAAVLPEGV 121 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHH-HHhCCCEEEEecCCCcCCC-Cch---hhH----HHHHHHHHHHHhhhhhhccccc
Confidence 45889999998643 5555554 4556899999999876432 111 111 2334444444421 2
Q ss_pred CCCCCCEEEEEecHHHHHHHHHHHHcCC----CCCCeeeccCCCC
Q psy2108 104 GDVEPDMHLIGFSLGAHVAAYTSKYLRP----YKLPRITGLDPAM 144 (345)
Q Consensus 104 g~~~~~vhLIGHSLGAhVAg~ag~~~~~----~~v~rItgLDPAg 144 (345)
..++++++|+||||||++|..++...+. .++..++++||..
T Consensus 122 ~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 122 RPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred ccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 3467899999999999999888866532 3689999999964
No 52
>PRK05855 short chain dehydrogenase; Validated
Probab=98.97 E-value=3e-09 Score=108.98 Aligned_cols=87 Identities=14% Similarity=0.088 Sum_probs=65.0
Q ss_pred CCCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCcc-ccccCHHHHHHHHHHHHHHHHhhcCCCCCC
Q psy2108 34 QKTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYV-ISVYNLEQVGKCVAQMIKRLSKYIGDVEPD 109 (345)
Q Consensus 34 ~~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~-~a~~~~~~vg~~la~~i~~L~~~~g~~~~~ 109 (345)
+++|++||+|||..+ |..+... | ..+++|+++|++++|.|..-. .........++++..+++.+ .+++
T Consensus 23 ~~~~~ivllHG~~~~~~~w~~~~~~-L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l------~~~~ 94 (582)
T PRK05855 23 PDRPTVVLVHGYPDNHEVWDGVAPL-L-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAV------SPDR 94 (582)
T ss_pred CCCCeEEEEcCCCchHHHHHHHHHH-h-hcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHh------CCCC
Confidence 457899999999765 4555554 4 357999999999999873211 12345778888888888876 2444
Q ss_pred -EEEEEecHHHHHHHHHHHH
Q psy2108 110 -MHLIGFSLGAHVAAYTSKY 128 (345)
Q Consensus 110 -vhLIGHSLGAhVAg~ag~~ 128 (345)
++|+||||||.+|..++..
T Consensus 95 ~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 95 PVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred cEEEEecChHHHHHHHHHhC
Confidence 9999999999998766654
No 53
>PRK10985 putative hydrolase; Provisional
Probab=98.96 E-value=5e-09 Score=101.51 Aligned_cols=106 Identities=11% Similarity=0.085 Sum_probs=70.2
Q ss_pred CCCccEEEEcCCCCC-----hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCC
Q psy2108 34 QKTFTNVIYHLMSIS-----IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEP 108 (345)
Q Consensus 34 ~~~pt~vliHG~~~s-----~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~ 108 (345)
.++|++|++||+..+ ...+... |.+.|++|+++|+++++.++.-........ ..+++..+++++.+.. +.+
T Consensus 56 ~~~p~vll~HG~~g~~~~~~~~~~~~~-l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~-~~~D~~~~i~~l~~~~--~~~ 131 (324)
T PRK10985 56 RHKPRLVLFHGLEGSFNSPYAHGLLEA-AQKRGWLGVVMHFRGCSGEPNRLHRIYHSG-ETEDARFFLRWLQREF--GHV 131 (324)
T ss_pred CCCCEEEEeCCCCCCCcCHHHHHHHHH-HHHCCCEEEEEeCCCCCCCccCCcceECCC-chHHHHHHHHHHHHhC--CCC
Confidence 356899999999643 2334443 456799999999999876532111111111 1357777888887653 457
Q ss_pred CEEEEEecHHHHHHHHHHHHcCCC-CCCeeeccCCC
Q psy2108 109 DMHLIGFSLGAHVAAYTSKYLRPY-KLPRITGLDPA 143 (345)
Q Consensus 109 ~vhLIGHSLGAhVAg~ag~~~~~~-~v~rItgLDPA 143 (345)
+++++||||||.++..+....+++ ++.+++.+.|.
T Consensus 132 ~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p 167 (324)
T PRK10985 132 PTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAP 167 (324)
T ss_pred CEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCC
Confidence 899999999999766544443322 48888888763
No 54
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.96 E-value=9.3e-09 Score=97.46 Aligned_cols=102 Identities=12% Similarity=0.083 Sum_probs=75.0
Q ss_pred CCccEEEEcCCCC----C---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCC
Q psy2108 35 KTFTNVIYHLMSI----S---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVE 107 (345)
Q Consensus 35 ~~pt~vliHG~~~----s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~ 107 (345)
+++.+|++||... + +..+.+. |.+.+++|+++|++++|.|... ........+++..++++|.+... ..
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~-l~~~G~~v~~~Dl~G~G~S~~~---~~~~~~~~~d~~~~~~~l~~~~~-g~ 99 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARR-LAEAGFPVLRFDYRGMGDSEGE---NLGFEGIDADIAAAIDAFREAAP-HL 99 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHH-HHHCCCEEEEeCCCCCCCCCCC---CCCHHHHHHHHHHHHHHHHhhCC-CC
Confidence 4567888887542 2 2334454 4556899999999999987432 13455667888899999876421 35
Q ss_pred CCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 108 PDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 108 ~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
++++|+||||||.+|..++.. ..+|++++.++|.
T Consensus 100 ~~i~l~G~S~Gg~~a~~~a~~--~~~v~~lil~~p~ 133 (274)
T TIGR03100 100 RRIVAWGLCDAASAALLYAPA--DLRVAGLVLLNPW 133 (274)
T ss_pred CcEEEEEECHHHHHHHHHhhh--CCCccEEEEECCc
Confidence 789999999999999888754 2689999999874
No 55
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=98.95 E-value=5.3e-09 Score=105.40 Aligned_cols=105 Identities=12% Similarity=0.134 Sum_probs=73.6
Q ss_pred CCCccEEEEcCCCCC----hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCC
Q psy2108 34 QKTFTNVIYHLMSIS----IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPD 109 (345)
Q Consensus 34 ~~~pt~vliHG~~~s----~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~ 109 (345)
.+.|++|+.||+.+. +..+.+ +|...||+|+++|++++|.+...+. ....... ...++++|.+...++.++
T Consensus 192 ~~~P~Vli~gG~~~~~~~~~~~~~~-~La~~Gy~vl~~D~pG~G~s~~~~~-~~d~~~~---~~avld~l~~~~~vd~~r 266 (414)
T PRK05077 192 GPFPTVLVCGGLDSLQTDYYRLFRD-YLAPRGIAMLTIDMPSVGFSSKWKL-TQDSSLL---HQAVLNALPNVPWVDHTR 266 (414)
T ss_pred CCccEEEEeCCcccchhhhHHHHHH-HHHhCCCEEEEECCCCCCCCCCCCc-cccHHHH---HHHHHHHHHhCcccCccc
Confidence 356777777777542 334444 4556789999999999988743321 1222222 235567776544567899
Q ss_pred EEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 110 MHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 110 vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
|.++||||||++|..++...+ .+|+.++.++|..
T Consensus 267 i~l~G~S~GG~~Al~~A~~~p-~ri~a~V~~~~~~ 300 (414)
T PRK05077 267 VAAFGFRFGANVAVRLAYLEP-PRLKAVACLGPVV 300 (414)
T ss_pred EEEEEEChHHHHHHHHHHhCC-cCceEEEEECCcc
Confidence 999999999999998887653 7899999998763
No 56
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=98.91 E-value=7.1e-09 Score=101.42 Aligned_cols=102 Identities=9% Similarity=0.122 Sum_probs=74.5
Q ss_pred CCccEEEEcCCCCC--------hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHH-HHHHHHHHHHHhhcCC
Q psy2108 35 KTFTNVIYHLMSIS--------IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVG-KCVAQMIKRLSKYIGD 105 (345)
Q Consensus 35 ~~pt~vliHG~~~s--------~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg-~~la~~i~~L~~~~g~ 105 (345)
.++++|++||+... ...+... |.+.||+|+++||++.+.+.. ..+..... +++...++++.+..
T Consensus 61 ~~~pvl~v~~~~~~~~~~d~~~~~~~~~~-L~~~G~~V~~~D~~g~g~s~~----~~~~~d~~~~~~~~~v~~l~~~~-- 133 (350)
T TIGR01836 61 HKTPLLIVYALVNRPYMLDLQEDRSLVRG-LLERGQDVYLIDWGYPDRADR----YLTLDDYINGYIDKCVDYICRTS-- 133 (350)
T ss_pred CCCcEEEeccccccceeccCCCCchHHHH-HHHCCCeEEEEeCCCCCHHHh----cCCHHHHHHHHHHHHHHHHHHHh--
Confidence 34569999997421 2456664 445689999999998765421 22344443 45788888887764
Q ss_pred CCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 106 VEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 106 ~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
+.+++++|||||||.++..++...+ ++|.+++.+.|..
T Consensus 134 ~~~~i~lvGhS~GG~i~~~~~~~~~-~~v~~lv~~~~p~ 171 (350)
T TIGR01836 134 KLDQISLLGICQGGTFSLCYAALYP-DKIKNLVTMVTPV 171 (350)
T ss_pred CCCcccEEEECHHHHHHHHHHHhCc-hheeeEEEecccc
Confidence 4689999999999999998877664 7899999998754
No 57
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.91 E-value=6.2e-09 Score=97.24 Aligned_cols=118 Identities=14% Similarity=0.125 Sum_probs=86.7
Q ss_pred cccchhccCCCccEEEEcCCCCChHHH-HHH-----HhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHH
Q psy2108 26 VTEEILIRQKTFTNVIYHLMSISIFFI-STE-----YFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRL 99 (345)
Q Consensus 26 ~~~~~~~~~~~pt~vliHG~~~s~~~l-~~a-----~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L 99 (345)
+.+.....+++..+|+||||..++.+- ..+ .+.. ...||.+.||..+.-..|.....+...-+..++++|..|
T Consensus 8 ~~~~l~~~~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~-~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L 86 (233)
T PF05990_consen 8 LNQRLAKSPDKEVLVFVHGYNNSFEDALRRAAQLAHDLGF-PGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDL 86 (233)
T ss_pred HHHHHhhCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCC-CceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 334444556888999999998764331 111 2222 338999999998876678877778888899999999999
Q ss_pred HhhcCCCCCCEEEEEecHHHHHHHHHHHHcCC--------CCCCeeeccCCCCCC
Q psy2108 100 SKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRP--------YKLPRITGLDPAMPM 146 (345)
Q Consensus 100 ~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~--------~~v~rItgLDPAgP~ 146 (345)
.+. .+.++||||+||||+.|...+-+.+.. .+++.|+.+.|.-+.
T Consensus 87 ~~~--~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 87 ARA--PGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred Hhc--cCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 765 257899999999999999888766431 256778888776543
No 58
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=98.89 E-value=1.4e-08 Score=92.37 Aligned_cols=109 Identities=8% Similarity=-0.053 Sum_probs=75.3
Q ss_pred CCCccEEEEcCCCCChHHHH-----HHHhhcCCeEEEEEcCCCCcCCC-C---ccccc-cCHHHHHHHHHHHHHHHHhhc
Q psy2108 34 QKTFTNVIYHLMSISIFFIS-----TEYFKRGDYNVWFVNWPELCRGP-C---YVISV-YNLEQVGKCVAQMIKRLSKYI 103 (345)
Q Consensus 34 ~~~pt~vliHG~~~s~~~l~-----~a~L~~~~~NVI~vDw~~~~~s~-~---Y~~a~-~~~~~vg~~la~~i~~L~~~~ 103 (345)
.+.|++|++||++.+...+. ..++.+.++.|+++|.++.+... + +.... .....-..++.++++.+.+..
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 90 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANY 90 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhc
Confidence 46799999999876533322 22455578999999998865321 1 11110 001112356778888888777
Q ss_pred CCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 104 GDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 104 g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
+++.+++.|+||||||.+|..++...+ +++..++.+...
T Consensus 91 ~id~~~i~l~G~S~Gg~~a~~~a~~~p-~~~~~~~~~~g~ 129 (212)
T TIGR01840 91 SIDPNRVYVTGLSAGGGMTAVLGCTYP-DVFAGGASNAGL 129 (212)
T ss_pred CcChhheEEEEECHHHHHHHHHHHhCc-hhheEEEeecCC
Confidence 788899999999999999998887764 778888777654
No 59
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.88 E-value=1.7e-08 Score=88.00 Aligned_cols=100 Identities=19% Similarity=0.130 Sum_probs=69.7
Q ss_pred CccEEEEcCCCCChHHHHH---HHhhcC-CeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEE
Q psy2108 36 TFTNVIYHLMSISIFFIST---EYFKRG-DYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMH 111 (345)
Q Consensus 36 ~pt~vliHG~~~s~~~l~~---a~L~~~-~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vh 111 (345)
.|+++++||+..+...... .+.... .++|+++|+++++.+. .. ........+++..+++.+ ..++++
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~--~~-~~~~~~~~~~~~~~~~~~------~~~~~~ 91 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD--PA-GYSLSAYADDLAALLDAL------GLEKVV 91 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC--cc-cccHHHHHHHHHHHHHHh------CCCceE
Confidence 5599999999755222222 222211 2899999999998874 11 112222355666666654 456699
Q ss_pred EEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCC
Q psy2108 112 LIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMP 145 (345)
Q Consensus 112 LIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP 145 (345)
|+|||+||.++..++...+ .++++++.++|..+
T Consensus 92 l~G~S~Gg~~~~~~~~~~p-~~~~~~v~~~~~~~ 124 (282)
T COG0596 92 LVGHSMGGAVALALALRHP-DRVRGLVLIGPAPP 124 (282)
T ss_pred EEEecccHHHHHHHHHhcc-hhhheeeEecCCCC
Confidence 9999999999999988875 79999999998765
No 60
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.87 E-value=6.5e-09 Score=92.43 Aligned_cols=76 Identities=12% Similarity=0.198 Sum_probs=61.4
Q ss_pred eEEEEEcCCCCcCCCC---ccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeee
Q psy2108 62 YNVWFVNWPELCRGPC---YVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRIT 138 (345)
Q Consensus 62 ~NVI~vDw~~~~~s~~---Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rIt 138 (345)
|.||++||+|.+.+.. ......++..+.+++..+++.+ +.+++++|||||||.++..++...+ ++|++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~~vG~S~Gg~~~~~~a~~~p-~~v~~lv 73 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL------GIKKINLVGHSMGGMLALEYAAQYP-ERVKKLV 73 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH------TTSSEEEEEETHHHHHHHHHHHHSG-GGEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh------CCCCeEEEEECCChHHHHHHHHHCc-hhhcCcE
Confidence 6899999999998853 3345566666666666666655 5677999999999999999998886 7999999
Q ss_pred ccCCCC
Q psy2108 139 GLDPAM 144 (345)
Q Consensus 139 gLDPAg 144 (345)
.+.|+.
T Consensus 74 l~~~~~ 79 (230)
T PF00561_consen 74 LISPPP 79 (230)
T ss_dssp EESESS
T ss_pred EEeeec
Confidence 998864
No 61
>PRK13604 luxD acyl transferase; Provisional
Probab=98.87 E-value=2e-08 Score=97.37 Aligned_cols=106 Identities=12% Similarity=0.018 Sum_probs=75.6
Q ss_pred cCCCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCC-cCCC-CccccccCHHHHHHHHHHHHHHHHhhcCCCC
Q psy2108 33 RQKTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPEL-CRGP-CYVISVYNLEQVGKCVAQMIKRLSKYIGDVE 107 (345)
Q Consensus 33 ~~~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~-~~s~-~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~ 107 (345)
..+.+++|+.||+... ...+++ +|.+.|++|+..|++++ |.|. .|... .+..-.+++...++||++. ..
T Consensus 34 ~~~~~~vIi~HGf~~~~~~~~~~A~-~La~~G~~vLrfD~rg~~GeS~G~~~~~--t~s~g~~Dl~aaid~lk~~---~~ 107 (307)
T PRK13604 34 PKKNNTILIASGFARRMDHFAGLAE-YLSSNGFHVIRYDSLHHVGLSSGTIDEF--TMSIGKNSLLTVVDWLNTR---GI 107 (307)
T ss_pred CCCCCEEEEeCCCCCChHHHHHHHH-HHHHCCCEEEEecCCCCCCCCCCccccC--cccccHHHHHHHHHHHHhc---CC
Confidence 3455789999999765 334444 56678999999999876 6653 22111 1111246888889999765 45
Q ss_pred CCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCCCC
Q psy2108 108 PDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMPMF 147 (345)
Q Consensus 108 ~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP~F 147 (345)
++|.|+||||||.+|..++.. .+++-++.+.|+..+-
T Consensus 108 ~~I~LiG~SmGgava~~~A~~---~~v~~lI~~sp~~~l~ 144 (307)
T PRK13604 108 NNLGLIAASLSARIAYEVINE---IDLSFLITAVGVVNLR 144 (307)
T ss_pred CceEEEEECHHHHHHHHHhcC---CCCCEEEEcCCcccHH
Confidence 789999999999998666642 3588899998886643
No 62
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=98.85 E-value=3e-08 Score=94.00 Aligned_cols=109 Identities=8% Similarity=0.002 Sum_probs=67.8
Q ss_pred CCCccEEEEcCCCCChHHH-----HHHHhhcCCeEEEEEcCCCCcCC--------------CCccccccC----HHHHHH
Q psy2108 34 QKTFTNVIYHLMSISIFFI-----STEYFKRGDYNVWFVNWPELCRG--------------PCYVISVYN----LEQVGK 90 (345)
Q Consensus 34 ~~~pt~vliHG~~~s~~~l-----~~a~L~~~~~NVI~vDw~~~~~s--------------~~Y~~a~~~----~~~vg~ 90 (345)
.+.|+++++||++.+...+ ...++.+.++.||++|....+.. ..|...... ....-.
T Consensus 40 ~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~ 119 (275)
T TIGR02821 40 GPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYS 119 (275)
T ss_pred CCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHH
Confidence 3569999999997642222 23455556899999998432211 012111000 001112
Q ss_pred HHH-HHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 91 CVA-QMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 91 ~la-~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
.++ ++...+.+.++++.+++.|+||||||++|..++...+ +.+..++.+.|+
T Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p-~~~~~~~~~~~~ 172 (275)
T TIGR02821 120 YIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNP-DRFKSVSAFAPI 172 (275)
T ss_pred HHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCc-ccceEEEEECCc
Confidence 322 2333344445677899999999999999999988775 788888887776
No 63
>KOG2382|consensus
Probab=98.81 E-value=1.8e-08 Score=97.46 Aligned_cols=107 Identities=18% Similarity=0.169 Sum_probs=84.8
Q ss_pred cCCCccEEEEcCCCC---ChHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCC
Q psy2108 33 RQKTFTNVIYHLMSI---SIFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPD 109 (345)
Q Consensus 33 ~~~~pt~vliHG~~~---s~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~ 109 (345)
....|+++++||..+ +|..+..++-++-+..|++||.+.||.++ +. ...+-..++.++..||+..... ....+
T Consensus 49 ~~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp-~~-~~h~~~~ma~dv~~Fi~~v~~~--~~~~~ 124 (315)
T KOG2382|consen 49 LERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSP-KI-TVHNYEAMAEDVKLFIDGVGGS--TRLDP 124 (315)
T ss_pred cCCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCc-cc-cccCHHHHHHHHHHHHHHcccc--cccCC
Confidence 347799999999744 58888888766678899999999999996 33 4567778899999999877432 14678
Q ss_pred EEEEEecHHH-HHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 110 MHLIGFSLGA-HVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 110 vhLIGHSLGA-hVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
+.|+|||||| .+|....... +..+.|++-+|-+.
T Consensus 125 ~~l~GHsmGG~~~~m~~t~~~-p~~~~rliv~D~sP 159 (315)
T KOG2382|consen 125 VVLLGHSMGGVKVAMAETLKK-PDLIERLIVEDISP 159 (315)
T ss_pred ceecccCcchHHHHHHHHHhc-CcccceeEEEecCC
Confidence 9999999999 6666666655 48899999999763
No 64
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.77 E-value=4.2e-08 Score=95.77 Aligned_cols=108 Identities=16% Similarity=0.174 Sum_probs=72.0
Q ss_pred CCccEEEEcCCCCChH-----------------------------HHHHHHhhcCCeEEEEEcCCCCcCCCCccc---cc
Q psy2108 35 KTFTNVIYHLMSISIF-----------------------------FISTEYFKRGDYNVWFVNWPELCRGPCYVI---SV 82 (345)
Q Consensus 35 ~~pt~vliHG~~~s~~-----------------------------~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~---a~ 82 (345)
.+-+++++||++.... .+... |.+.|++|+++|++|+|.+..... ..
T Consensus 20 ~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~-l~~~G~~V~~~D~rGHG~S~~~~~~~g~~ 98 (332)
T TIGR01607 20 AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIEN-FNKNGYSVYGLDLQGHGESDGLQNLRGHI 98 (332)
T ss_pred CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHH-HHHCCCcEEEecccccCCCccccccccch
Confidence 4568999999865432 23443 556789999999999998743211 12
Q ss_pred cCHHHHHHHHHHHHHHHHhhc-----------------CCC-CCCEEEEEecHHHHHHHHHHHHcCC-------CCCCee
Q psy2108 83 YNLEQVGKCVAQMIKRLSKYI-----------------GDV-EPDMHLIGFSLGAHVAAYTSKYLRP-------YKLPRI 137 (345)
Q Consensus 83 ~~~~~vg~~la~~i~~L~~~~-----------------g~~-~~~vhLIGHSLGAhVAg~ag~~~~~-------~~v~rI 137 (345)
.+...+.+++.++++.+.+.. ..+ -..+.|+||||||.|+..++..++. ..|..+
T Consensus 99 ~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~ 178 (332)
T TIGR01607 99 NCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGC 178 (332)
T ss_pred hhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceE
Confidence 356777788888887765410 011 2369999999999999887765431 145666
Q ss_pred eccCCC
Q psy2108 138 TGLDPA 143 (345)
Q Consensus 138 tgLDPA 143 (345)
+.+.|+
T Consensus 179 i~~s~~ 184 (332)
T TIGR01607 179 ISLSGM 184 (332)
T ss_pred EEeccc
Confidence 656554
No 65
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.76 E-value=9.6e-09 Score=95.29 Aligned_cols=88 Identities=19% Similarity=0.238 Sum_probs=55.2
Q ss_pred ccEEEEcCCCC----ChHHHHHHHhhcCCeE---EEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCC
Q psy2108 37 FTNVIYHLMSI----SIFFISTEYFKRGDYN---VWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPD 109 (345)
Q Consensus 37 pt~vliHG~~~----s~~~l~~a~L~~~~~N---VI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~ 109 (345)
.|+|||||.+. .|..+++. |+..||. |.+++|.................. .++|++||+...+.+| - +
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~-l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~-~~~l~~fI~~Vl~~TG--a-k 76 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPY-LKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCES-AKQLRAFIDAVLAYTG--A-K 76 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHH-HHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHH-HHHHHHHHHHHHHHHT-----
T ss_pred CCEEEECCCCcchhhCHHHHHHH-HHHcCCCcceeEeccCCCCCCCCcccccccchhh-HHHHHHHHHHHHHhhC--C-E
Confidence 47999999865 26666664 5566898 899999765442211112223333 4899999999998887 3 9
Q ss_pred EEEEEecHHHHHHHHHHHHc
Q psy2108 110 MHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 110 vhLIGHSLGAhVAg~ag~~~ 129 (345)
|.|||||||+-+|-++-+..
T Consensus 77 VDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 77 VDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEEEEETCHHHHHHHHHHHC
T ss_pred EEEEEcCCcCHHHHHHHHHc
Confidence 99999999999999998754
No 66
>PLN02442 S-formylglutathione hydrolase
Probab=98.76 E-value=1.1e-07 Score=90.87 Aligned_cols=107 Identities=11% Similarity=-0.035 Sum_probs=67.5
Q ss_pred CCCccEEEEcCCCCChH---HHH--HHHhhcCCeEEEEEcCCCCcC-----C---------CCccccc-------cCHHH
Q psy2108 34 QKTFTNVIYHLMSISIF---FIS--TEYFKRGDYNVWFVNWPELCR-----G---------PCYVISV-------YNLEQ 87 (345)
Q Consensus 34 ~~~pt~vliHG~~~s~~---~l~--~a~L~~~~~NVI~vDw~~~~~-----s---------~~Y~~a~-------~~~~~ 87 (345)
++.|+++++||+..+-. .+. ..++...++.||++|....+. + ..|..+. .....
T Consensus 45 ~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (283)
T PLN02442 45 GKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDY 124 (283)
T ss_pred CCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhh
Confidence 46799999999875421 111 235566789999999865431 0 0121111 11122
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 88 VGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 88 vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
+.+++..+++...+ .++.++++|+||||||++|..++.+.+ +++..++.+.|.
T Consensus 125 ~~~~l~~~i~~~~~--~~~~~~~~i~G~S~GG~~a~~~a~~~p-~~~~~~~~~~~~ 177 (283)
T PLN02442 125 VVKELPKLLSDNFD--QLDTSRASIFGHSMGGHGALTIYLKNP-DKYKSVSAFAPI 177 (283)
T ss_pred HHHHHHHHHHHHHH--hcCCCceEEEEEChhHHHHHHHHHhCc-hhEEEEEEECCc
Confidence 33334333333322 247899999999999999998888765 788888888876
No 67
>KOG1455|consensus
Probab=98.75 E-value=1.3e-07 Score=90.91 Aligned_cols=133 Identities=12% Similarity=0.035 Sum_probs=92.3
Q ss_pred EeecccccccccccchhccCC----CccEEEEcCCCCC----hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHH
Q psy2108 15 LNFRLRRFYAIVTEEILIRQK----TFTNVIYHLMSIS----IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLE 86 (345)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~----~pt~vliHG~~~s----~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~ 86 (345)
..+-.|+....+.-+.|...+ +-.++++||++.. ...++.. |...|+-|.++||.|||.|..-..-+.+..
T Consensus 29 ~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~-l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d 107 (313)
T KOG1455|consen 29 ESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKR-LAKSGFAVYAIDYEGHGRSDGLHAYVPSFD 107 (313)
T ss_pred eeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHH-HHhCCCeEEEeeccCCCcCCCCcccCCcHH
Confidence 334444444456555554422 2357889998642 4445554 456799999999999999853333356778
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCCCCCC
Q psy2108 87 QVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMPMFMS 149 (345)
Q Consensus 87 ~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP~F~~ 149 (345)
.+.+++-.+++.+......+--..-|.||||||.||..++..- ++.....++.-|.-+.-+.
T Consensus 108 ~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~-p~~w~G~ilvaPmc~i~~~ 169 (313)
T KOG1455|consen 108 LVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKD-PNFWDGAILVAPMCKISED 169 (313)
T ss_pred HHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhC-CcccccceeeecccccCCc
Confidence 8888888888876533233445689999999999999999874 4788888888887665544
No 68
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.70 E-value=7e-08 Score=106.99 Aligned_cols=104 Identities=16% Similarity=0.276 Sum_probs=63.7
Q ss_pred CCCccEEEEcCCCCC--hHHHH-----HHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCC
Q psy2108 34 QKTFTNVIYHLMSIS--IFFIS-----TEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDV 106 (345)
Q Consensus 34 ~~~pt~vliHG~~~s--~~~l~-----~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~ 106 (345)
..++++||||||..+ .+++. -.+|.+.+++|+++||..-.....+ ...+.......+.+.++.+.+. .
T Consensus 65 ~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~G~~~~~~~~--~~~~l~~~i~~l~~~l~~v~~~---~ 139 (994)
T PRK07868 65 PVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDFGSPDKVEGG--MERNLADHVVALSEAIDTVKDV---T 139 (994)
T ss_pred CCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcCCCCChhHcC--ccCCHHHHHHHHHHHHHHHHHh---h
Confidence 467899999999654 22211 1356566899999999532111011 0122222223344444444333 2
Q ss_pred CCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCC
Q psy2108 107 EPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDP 142 (345)
Q Consensus 107 ~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDP 142 (345)
.+++||+||||||.+|..++...++++|++++.+++
T Consensus 140 ~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~ 175 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGS 175 (994)
T ss_pred CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEec
Confidence 468999999999999976665444468999997554
No 69
>PLN02872 triacylglycerol lipase
Probab=98.69 E-value=1.9e-08 Score=100.96 Aligned_cols=108 Identities=12% Similarity=0.118 Sum_probs=74.9
Q ss_pred CCCccEEEEcCCCCC---h------HHHHHHHhhcCCeEEEEEcCCCCcCCC---Ccccc-----ccCHHHHH-HHHHHH
Q psy2108 34 QKTFTNVIYHLMSIS---I------FFISTEYFKRGDYNVWFVNWPELCRGP---CYVIS-----VYNLEQVG-KCVAQM 95 (345)
Q Consensus 34 ~~~pt~vliHG~~~s---~------~~l~~a~L~~~~~NVI~vDw~~~~~s~---~Y~~a-----~~~~~~vg-~~la~~ 95 (345)
.++|+++++||+..+ | ..+.. .|...||.|+++||++.+.+. .+... .......+ .++.++
T Consensus 72 ~~~~~Vll~HGl~~ss~~w~~~~~~~sla~-~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~ 150 (395)
T PLN02872 72 QRGPPVLLQHGLFMAGDAWFLNSPEQSLGF-ILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEM 150 (395)
T ss_pred CCCCeEEEeCcccccccceeecCcccchHH-HHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHH
Confidence 346899999998432 2 12322 355678999999999865321 11111 13456677 799999
Q ss_pred HHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCC--CCCCeeeccCCCCCC
Q psy2108 96 IKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRP--YKLPRITGLDPAMPM 146 (345)
Q Consensus 96 i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~--~~v~rItgLDPAgP~ 146 (345)
|+++.+. ..+++++|||||||.++..+.. .+. ++|..+++|.|+..+
T Consensus 151 id~i~~~---~~~~v~~VGhS~Gg~~~~~~~~-~p~~~~~v~~~~~l~P~~~~ 199 (395)
T PLN02872 151 IHYVYSI---TNSKIFIVGHSQGTIMSLAALT-QPNVVEMVEAAALLCPISYL 199 (395)
T ss_pred HHHHHhc---cCCceEEEEECHHHHHHHHHhh-ChHHHHHHHHHHHhcchhhh
Confidence 9999754 2479999999999999875553 221 478999999998754
No 70
>PRK11460 putative hydrolase; Provisional
Probab=98.68 E-value=1.6e-07 Score=87.24 Aligned_cols=109 Identities=14% Similarity=0.074 Sum_probs=66.7
Q ss_pred cCCCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCC------CCccc----c---ccCHHHHHHHHHHHH
Q psy2108 33 RQKTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRG------PCYVI----S---VYNLEQVGKCVAQMI 96 (345)
Q Consensus 33 ~~~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s------~~Y~~----a---~~~~~~vg~~la~~i 96 (345)
.+.+|++|++||++++ +..+... |.+...++.+++..+.... ..|.. . ...+....+.+.+++
T Consensus 13 ~~~~~~vIlLHG~G~~~~~~~~l~~~-l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i 91 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVAMGEIGSW-FAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETV 91 (232)
T ss_pred CCCCcEEEEEeCCCCChHHHHHHHHH-HHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHH
Confidence 4567899999999876 3444443 3333333444443332110 01211 0 111223334555666
Q ss_pred HHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 97 KRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 97 ~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
+++.+..+++.++|+|+|||+||.+|..++...+ +.++.++++.+.
T Consensus 92 ~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~-~~~~~vv~~sg~ 137 (232)
T PRK11460 92 RYWQQQSGVGASATALIGFSQGAIMALEAVKAEP-GLAGRVIAFSGR 137 (232)
T ss_pred HHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCC-CcceEEEEeccc
Confidence 6666666778899999999999999998887654 677888877554
No 71
>PRK10162 acetyl esterase; Provisional
Probab=98.67 E-value=1.3e-07 Score=91.87 Aligned_cols=101 Identities=13% Similarity=-0.018 Sum_probs=66.7
Q ss_pred CCccEEEEcCCC---C---ChHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHH---hhcCC
Q psy2108 35 KTFTNVIYHLMS---I---SIFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLS---KYIGD 105 (345)
Q Consensus 35 ~~pt~vliHG~~---~---s~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~---~~~g~ 105 (345)
..|++|++||-+ . .+..+...+....++.|++|||+..... .|+.+. +++...++|+. +..|+
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~-~~p~~~-------~D~~~a~~~l~~~~~~~~~ 151 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEA-RFPQAI-------EEIVAVCCYFHQHAEDYGI 151 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCC-CCCCcH-------HHHHHHHHHHHHhHHHhCC
Confidence 458899999832 2 2444555555446899999999965443 366443 33444444543 23577
Q ss_pred CCCCEEEEEecHHHHHHHHHHHHcCC-----CCCCeeeccCCC
Q psy2108 106 VEPDMHLIGFSLGAHVAAYTSKYLRP-----YKLPRITGLDPA 143 (345)
Q Consensus 106 ~~~~vhLIGHSLGAhVAg~ag~~~~~-----~~v~rItgLDPA 143 (345)
+.++|.|+|+|+||++|..++..+.. .++..++.+.|.
T Consensus 152 d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~ 194 (318)
T PRK10162 152 NMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGL 194 (318)
T ss_pred ChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCc
Confidence 88999999999999999988876531 345555555553
No 72
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.64 E-value=2.2e-07 Score=96.55 Aligned_cols=102 Identities=8% Similarity=0.069 Sum_probs=69.6
Q ss_pred CCccEEEEcCCCCC--------hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCH-HHHHHHHHHHHHHHHhhcCC
Q psy2108 35 KTFTNVIYHLMSIS--------IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNL-EQVGKCVAQMIKRLSKYIGD 105 (345)
Q Consensus 35 ~~pt~vliHG~~~s--------~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~-~~vg~~la~~i~~L~~~~g~ 105 (345)
.++++|+||||... -..+.+. |.+.|++|+++||++++.+... ... ..+.+.+.+.|+.+.+..
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~-L~~qGf~V~~iDwrgpg~s~~~----~~~ddY~~~~i~~al~~v~~~~-- 259 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRW-LVEQGHTVFVISWRNPDASQAD----KTFDDYIRDGVIAALEVVEAIT-- 259 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHH-HHHCCcEEEEEECCCCCccccc----CChhhhHHHHHHHHHHHHHHhc--
Confidence 56889999998532 2345554 4456899999999998765211 112 233355777777776653
Q ss_pred CCCCEEEEEecHHHHHHHH----HHHHcCCCCCCeeeccCCC
Q psy2108 106 VEPDMHLIGFSLGAHVAAY----TSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 106 ~~~~vhLIGHSLGAhVAg~----ag~~~~~~~v~rItgLDPA 143 (345)
+.++++++||||||.++.. ++....+++|+.++.+...
T Consensus 260 g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~ 301 (532)
T TIGR01838 260 GEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTL 301 (532)
T ss_pred CCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecC
Confidence 5789999999999998632 2322213689999988865
No 73
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.61 E-value=3e-07 Score=85.52 Aligned_cols=105 Identities=17% Similarity=0.192 Sum_probs=67.6
Q ss_pred CCCccEEEEcCCCCChHHHH---HHH-----hh--cCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhc
Q psy2108 34 QKTFTNVIYHLMSISIFFIS---TEY-----FK--RGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYI 103 (345)
Q Consensus 34 ~~~pt~vliHG~~~s~~~l~---~a~-----L~--~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~ 103 (345)
.++.++|||||..++...++ ... .. ...++++.+|+...... .+ ...+..-++.+++.++.|.+.+
T Consensus 2 ~~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~-~~---g~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 2 LSGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSA-FH---GRTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccc-cc---cccHHHHHHHHHHHHHHHHHhh
Confidence 35788999999877644332 221 11 12588999999875332 11 1223344555555555554432
Q ss_pred ---CCCCCCEEEEEecHHHHHHHHHHHHcC--CCCCCeeeccCC
Q psy2108 104 ---GDVEPDMHLIGFSLGAHVAAYTSKYLR--PYKLPRITGLDP 142 (345)
Q Consensus 104 ---g~~~~~vhLIGHSLGAhVAg~ag~~~~--~~~v~rItgLDP 142 (345)
.-+.++|.||||||||-||-.+..... ..+|..|+-|..
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~t 121 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGT 121 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcC
Confidence 347899999999999999988876532 247888888763
No 74
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.60 E-value=6.7e-07 Score=81.19 Aligned_cols=101 Identities=17% Similarity=0.170 Sum_probs=71.9
Q ss_pred ccEEEEcCCCCC---hHHHHHHHhhcCC-eEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEE
Q psy2108 37 FTNVIYHLMSIS---IFFISTEYFKRGD-YNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHL 112 (345)
Q Consensus 37 pt~vliHG~~~s---~~~l~~a~L~~~~-~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhL 112 (345)
+|++++|+.+++ ...+++.+ ..+ ++|+.+++++.... .....+++.++...++-|.... +-..++|
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l--~~~~~~v~~i~~~~~~~~---~~~~~si~~la~~y~~~I~~~~-----~~gp~~L 70 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARAL--PDDVIGVYGIEYPGRGDD---EPPPDSIEELASRYAEAIRARQ-----PEGPYVL 70 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHH--TTTEEEEEEECSTTSCTT---SHEESSHHHHHHHHHHHHHHHT-----SSSSEEE
T ss_pred CeEEEEcCCccCHHHHHHHHHhC--CCCeEEEEEEecCCCCCC---CCCCCCHHHHHHHHHHHhhhhC-----CCCCeee
Confidence 479999987654 67787754 344 99999999998632 1223556665555544444331 2238999
Q ss_pred EEecHHHHHHHHHHHHcC--CCCCCeeeccCCCCCCC
Q psy2108 113 IGFSLGAHVAAYTSKYLR--PYKLPRITGLDPAMPMF 147 (345)
Q Consensus 113 IGHSLGAhVAg~ag~~~~--~~~v~rItgLDPAgP~F 147 (345)
+|||+||.||-.+++++. +.++.+++.+|...|..
T Consensus 71 ~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~ 107 (229)
T PF00975_consen 71 AGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSI 107 (229)
T ss_dssp EEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTC
T ss_pred hccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCc
Confidence 999999999999999874 36799999999877765
No 75
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.60 E-value=6.6e-08 Score=86.84 Aligned_cols=97 Identities=20% Similarity=0.098 Sum_probs=65.4
Q ss_pred EEEEcC--CC----CChHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhh---cCCCCCC
Q psy2108 39 NVIYHL--MS----ISIFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKY---IGDVEPD 109 (345)
Q Consensus 39 ~vliHG--~~----~s~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~---~g~~~~~ 109 (345)
+|++|| |. .+...+...+.++.++.|+++|++-.... .|+ ..-+++.+.++|+.++ .+++.++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~-~~p-------~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEA-PFP-------AALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTS-STT-------HHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccc-ccc-------ccccccccceeeeccccccccccccc
Confidence 689997 42 23455555556556899999999964333 343 3346777777777654 5778999
Q ss_pred EEEEEecHHHHHHHHHHHHcCC---CCCCeeeccCCC
Q psy2108 110 MHLIGFSLGAHVAAYTSKYLRP---YKLPRITGLDPA 143 (345)
Q Consensus 110 vhLIGHSLGAhVAg~ag~~~~~---~~v~rItgLDPA 143 (345)
|.|+|+|.|||+|..++..... .+++.++.+.|.
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPW 109 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCH
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhccccc
Confidence 9999999999999998876542 247888888883
No 76
>COG1647 Esterase/lipase [General function prediction only]
Probab=98.54 E-value=5.9e-07 Score=82.96 Aligned_cols=108 Identities=12% Similarity=0.131 Sum_probs=81.2
Q ss_pred hhccCCCccEEEEcCCCCChHHHHH--HHhhcCCeEEEEEcCCCCcCCC-CccccccCHHHHHHHHHHHHHHHHhhcCCC
Q psy2108 30 ILIRQKTFTNVIYHLMSISIFFIST--EYFKRGDYNVWFVNWPELCRGP-CYVISVYNLEQVGKCVAQMIKRLSKYIGDV 106 (345)
Q Consensus 30 ~~~~~~~pt~vliHG~~~s~~~l~~--a~L~~~~~NVI~vDw~~~~~s~-~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~ 106 (345)
..+......++||||+.++..+++. .+|++.||.|.++.++|||..+ .+. ..+.++.=+++-+-.+.|.+. .
T Consensus 9 f~f~~G~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl--~t~~~DW~~~v~d~Y~~L~~~---g 83 (243)
T COG1647 9 FTFEGGNRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFL--KTTPRDWWEDVEDGYRDLKEA---G 83 (243)
T ss_pred eeeccCCEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHh--cCCHHHHHHHHHHHHHHHHHc---C
Confidence 3455666789999999887665543 3678889999999999999764 111 223455556666667777654 4
Q ss_pred CCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCC
Q psy2108 107 EPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMP 145 (345)
Q Consensus 107 ~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP 145 (345)
.+.|.++|.||||-.|+..|.+++ +++|+.+.++--
T Consensus 84 y~eI~v~GlSmGGv~alkla~~~p---~K~iv~m~a~~~ 119 (243)
T COG1647 84 YDEIAVVGLSMGGVFALKLAYHYP---PKKIVPMCAPVN 119 (243)
T ss_pred CCeEEEEeecchhHHHHHHHhhCC---ccceeeecCCcc
Confidence 789999999999999999999874 788998887643
No 77
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.51 E-value=7.4e-07 Score=95.92 Aligned_cols=93 Identities=14% Similarity=0.063 Sum_probs=67.0
Q ss_pred CCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCC----------------c------cccccCHHHHH
Q psy2108 35 KTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPC----------------Y------VISVYNLEQVG 89 (345)
Q Consensus 35 ~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~----------------Y------~~a~~~~~~vg 89 (345)
..|++|++||+... |..+... |.+.+|+||++|+++||.+.. | ..+..+.+...
T Consensus 448 g~P~VVllHG~~g~~~~~~~lA~~-La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v 526 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENALAFAGT-LAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSI 526 (792)
T ss_pred CCcEEEEeCCCCCCHHHHHHHHHH-HHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHH
Confidence 45789999999765 5555554 445689999999999998721 1 11234778777
Q ss_pred HHHHHHHHHHH------hh----cCCCCCCEEEEEecHHHHHHHHHHHH
Q psy2108 90 KCVAQMIKRLS------KY----IGDVEPDMHLIGFSLGAHVAAYTSKY 128 (345)
Q Consensus 90 ~~la~~i~~L~------~~----~g~~~~~vhLIGHSLGAhVAg~ag~~ 128 (345)
.++..+...|. +. ..++..+++++||||||.++..+...
T Consensus 527 ~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 527 LDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 88887777775 11 12456799999999999999877754
No 78
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.50 E-value=5.4e-07 Score=87.63 Aligned_cols=94 Identities=15% Similarity=0.070 Sum_probs=69.3
Q ss_pred hccCCCccEEEEcCCCCC-----hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCC
Q psy2108 31 LIRQKTFTNVIYHLMSIS-----IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGD 105 (345)
Q Consensus 31 ~~~~~~pt~vliHG~~~s-----~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~ 105 (345)
+..+++|++|++||..++ .+.+..++. +.++.|+++||++.+.+++ ..........-++++.++++|... .
T Consensus 70 p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~-~rg~~~Vv~~~Rgcs~~~n-~~p~~yh~G~t~D~~~~l~~l~~~--~ 145 (345)
T COG0429 70 PRAAKKPLVVLFHGLEGSSNSPYARGLMRALS-RRGWLVVVFHFRGCSGEAN-TSPRLYHSGETEDIRFFLDWLKAR--F 145 (345)
T ss_pred ccccCCceEEEEeccCCCCcCHHHHHHHHHHH-hcCCeEEEEecccccCCcc-cCcceecccchhHHHHHHHHHHHh--C
Confidence 456688999999998432 455556544 5679999999999987743 222222222347999999999875 2
Q ss_pred CCCCEEEEEecHHH-HHHHHHHHH
Q psy2108 106 VEPDMHLIGFSLGA-HVAAYTSKY 128 (345)
Q Consensus 106 ~~~~vhLIGHSLGA-hVAg~ag~~ 128 (345)
+..++..+|+|||| ++|-+.|+.
T Consensus 146 ~~r~~~avG~SLGgnmLa~ylgee 169 (345)
T COG0429 146 PPRPLYAVGFSLGGNMLANYLGEE 169 (345)
T ss_pred CCCceEEEEecccHHHHHHHHHhh
Confidence 67899999999999 888888875
No 79
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.46 E-value=5.7e-07 Score=93.64 Aligned_cols=109 Identities=8% Similarity=-0.029 Sum_probs=78.6
Q ss_pred CCccEEEEcCCCCChH-------HHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCC
Q psy2108 35 KTFTNVIYHLMSISIF-------FISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVE 107 (345)
Q Consensus 35 ~~pt~vliHG~~~s~~-------~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~ 107 (345)
+.|++|++||++.... .... ++...+|.|+++|.++++.|..-.. ... ....+++.++|++|.+. ...-
T Consensus 21 ~~P~Il~~~gyg~~~~~~~~~~~~~~~-~l~~~Gy~vv~~D~RG~g~S~g~~~-~~~-~~~~~D~~~~i~~l~~q-~~~~ 96 (550)
T TIGR00976 21 PVPVILSRTPYGKDAGLRWGLDKTEPA-WFVAQGYAVVIQDTRGRGASEGEFD-LLG-SDEAADGYDLVDWIAKQ-PWCD 96 (550)
T ss_pred CCCEEEEecCCCCchhhccccccccHH-HHHhCCcEEEEEeccccccCCCceE-ecC-cccchHHHHHHHHHHhC-CCCC
Confidence 5689999999875421 1223 4446799999999999988742111 111 34668999999999765 2233
Q ss_pred CCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCCCCC
Q psy2108 108 PDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMPMFM 148 (345)
Q Consensus 108 ~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP~F~ 148 (345)
.+|.++|||+||.+|..++...+ .+|+.|+...+..-.+.
T Consensus 97 ~~v~~~G~S~GG~~a~~~a~~~~-~~l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 97 GNVGMLGVSYLAVTQLLAAVLQP-PALRAIAPQEGVWDLYR 136 (550)
T ss_pred CcEEEEEeChHHHHHHHHhccCC-CceeEEeecCcccchhH
Confidence 69999999999999998887654 68888888777755543
No 80
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.45 E-value=1.1e-06 Score=88.07 Aligned_cols=103 Identities=18% Similarity=0.132 Sum_probs=73.0
Q ss_pred CCCccEEEEcCCCCC----------------hHHHHHH--HhhcCCeEEEEEcCCCCcCC--CC----------------
Q psy2108 34 QKTFTNVIYHLMSIS----------------IFFISTE--YFKRGDYNVWFVNWPELCRG--PC---------------- 77 (345)
Q Consensus 34 ~~~pt~vliHG~~~s----------------~~~l~~a--~L~~~~~NVI~vDw~~~~~s--~~---------------- 77 (345)
.+.+.||+.|+++.+ |..+.-. .+....|-||++|..+.+.+ |.
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 445788889998653 2222111 23445799999999876531 10
Q ss_pred cc--ccccCHHHHHHHHHHHHHHHHhhcCCCCCCEE-EEEecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 78 YV--ISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMH-LIGFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 78 Y~--~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vh-LIGHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
|. .+..+++++++++.++++.| ++++++ +|||||||.+|...+.+.+ ++|++++.+..+
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~l------gi~~~~~vvG~SmGG~ial~~a~~~P-~~v~~lv~ia~~ 195 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSL------GIARLHAVMGPSMGGMQAQEWAVHYP-HMVERMIGVIGN 195 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHc------CCCCceEEEEECHHHHHHHHHHHHCh-HhhheEEEEecC
Confidence 10 12356777777777777765 578997 9999999999999998885 899999999765
No 81
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.41 E-value=1.3e-06 Score=79.69 Aligned_cols=116 Identities=16% Similarity=0.088 Sum_probs=69.3
Q ss_pred hccCCCccEEEEcCCCCChHHHHHHH---hhcCCeEEEEEcCCC------CcCC--CCcccc---------ccCHHHHHH
Q psy2108 31 LIRQKTFTNVIYHLMSISIFFISTEY---FKRGDYNVWFVNWPE------LCRG--PCYVIS---------VYNLEQVGK 90 (345)
Q Consensus 31 ~~~~~~pt~vliHG~~~s~~~l~~a~---L~~~~~NVI~vDw~~------~~~s--~~Y~~a---------~~~~~~vg~ 90 (345)
+-.++++++|++||++++...+.... +...+..+|.+.-+. .+.. ..|... ...+....+
T Consensus 9 ~~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 9 PKGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp -SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 34567789999999998754444322 234578888876432 1110 123211 123344556
Q ss_pred HHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCCCCC
Q psy2108 91 CVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMPMFM 148 (345)
Q Consensus 91 ~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP~F~ 148 (345)
.|.++|+.+.+. +++.++|.|+|+|.||.+|..++.+.+ ++++.+++|-...|...
T Consensus 89 ~l~~li~~~~~~-~i~~~ri~l~GFSQGa~~al~~~l~~p-~~~~gvv~lsG~~~~~~ 144 (216)
T PF02230_consen 89 RLDELIDEEVAY-GIDPSRIFLGGFSQGAAMALYLALRYP-EPLAGVVALSGYLPPES 144 (216)
T ss_dssp HHHHHHHHHHHT-T--GGGEEEEEETHHHHHHHHHHHCTS-STSSEEEEES---TTGC
T ss_pred HHHHHHHHHHHc-CCChhheehhhhhhHHHHHHHHHHHcC-cCcCEEEEeeccccccc
Confidence 667777766554 688999999999999999999998775 79999999998776643
No 82
>COG0400 Predicted esterase [General function prediction only]
Probab=98.26 E-value=6.8e-06 Score=75.71 Aligned_cols=117 Identities=15% Similarity=0.043 Sum_probs=79.3
Q ss_pred hhccCCCccEEEEcCCCCChHHHHHH-HhhcCCeEEEEEc----CCCCcCC-CCccccccCHHHHH---HHHHHHHHHHH
Q psy2108 30 ILIRQKTFTNVIYHLMSISIFFISTE-YFKRGDYNVWFVN----WPELCRG-PCYVISVYNLEQVG---KCVAQMIKRLS 100 (345)
Q Consensus 30 ~~~~~~~pt~vliHG~~~s~~~l~~a-~L~~~~~NVI~vD----w~~~~~s-~~Y~~a~~~~~~vg---~~la~~i~~L~ 100 (345)
.+..+..|++|++||++.+-.++... .+..++..++.+- |.+..+- ..|.....+.+.+. +.++++|+.+.
T Consensus 12 ~~~~p~~~~iilLHG~Ggde~~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~ 91 (207)
T COG0400 12 KPGDPAAPLLILLHGLGGDELDLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELA 91 (207)
T ss_pred CCCCCCCcEEEEEecCCCChhhhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHH
Confidence 45566778899999999876666552 1113566666543 2222211 01222333444444 44555555556
Q ss_pred hhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCCCC
Q psy2108 101 KYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMPMF 147 (345)
Q Consensus 101 ~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP~F 147 (345)
+++|++.+++.++|||-||.||..++...+ +.+++++++-|..|.-
T Consensus 92 ~~~gi~~~~ii~~GfSqGA~ial~~~l~~~-~~~~~ail~~g~~~~~ 137 (207)
T COG0400 92 EEYGIDSSRIILIGFSQGANIALSLGLTLP-GLFAGAILFSGMLPLE 137 (207)
T ss_pred HHhCCChhheEEEecChHHHHHHHHHHhCc-hhhccchhcCCcCCCC
Confidence 677999999999999999999999998875 7899999999987753
No 83
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.25 E-value=9.6e-06 Score=77.60 Aligned_cols=100 Identities=20% Similarity=0.204 Sum_probs=76.0
Q ss_pred CccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEE
Q psy2108 36 TFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHL 112 (345)
Q Consensus 36 ~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhL 112 (345)
..|+|-+||--+| +.-+++ .|...+.+||.++|||++.++.|+.-..+-..-...+..||+.| ++. +++..
T Consensus 35 ~gTVv~~hGsPGSH~DFkYi~~-~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l----~i~-~~~i~ 108 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHNDFKYIRP-PLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDEL----GIK-GKLIF 108 (297)
T ss_pred ceeEEEecCCCCCccchhhhhh-HHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHc----CCC-CceEE
Confidence 3489999998665 444555 56677999999999999998877765554444455666666665 554 78999
Q ss_pred EEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 113 IGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 113 IGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
||||.|+-.|...+... ++..++.+.|.|
T Consensus 109 ~gHSrGcenal~la~~~---~~~g~~lin~~G 137 (297)
T PF06342_consen 109 LGHSRGCENALQLAVTH---PLHGLVLINPPG 137 (297)
T ss_pred EEeccchHHHHHHHhcC---ccceEEEecCCc
Confidence 99999999999988765 466888888876
No 84
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.17 E-value=8.1e-06 Score=78.45 Aligned_cols=101 Identities=12% Similarity=-0.012 Sum_probs=67.8
Q ss_pred CCccEEEEcC--CC----CChHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHh---hcCC
Q psy2108 35 KTFTNVIYHL--MS----ISIFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSK---YIGD 105 (345)
Q Consensus 35 ~~pt~vliHG--~~----~s~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~---~~g~ 105 (345)
..|++|++|| |- .....+...++...++-|++|||+-.-+. .|+.+. +++.+.+.|+.+ ++|.
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~-~~p~~~-------~d~~~a~~~l~~~~~~~g~ 149 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH-PFPAAL-------EDAYAAYRWLRANAAELGI 149 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC-CCCchH-------HHHHHHHHHHHhhhHhhCC
Confidence 4799999998 31 12323444456667999999999976554 466544 233344455543 3578
Q ss_pred CCCCEEEEEecHHHHHHHHHHHHcCCC---CCCeeeccCCC
Q psy2108 106 VEPDMHLIGFSLGAHVAAYTSKYLRPY---KLPRITGLDPA 143 (345)
Q Consensus 106 ~~~~vhLIGHSLGAhVAg~ag~~~~~~---~v~rItgLDPA 143 (345)
++++|.+.|+|.|||+|..++.....+ .....+++-|.
T Consensus 150 dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~ 190 (312)
T COG0657 150 DPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPL 190 (312)
T ss_pred CccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecc
Confidence 899999999999999999998876422 33444444443
No 85
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.14 E-value=4.3e-06 Score=75.61 Aligned_cols=89 Identities=12% Similarity=-0.016 Sum_probs=62.8
Q ss_pred HHHhhcCCeEEEEEcCCCCcCCC-Ccccc-cc-CHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcC
Q psy2108 54 TEYFKRGDYNVWFVNWPELCRGP-CYVIS-VY-NLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLR 130 (345)
Q Consensus 54 ~a~L~~~~~NVI~vDw~~~~~s~-~Y~~a-~~-~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~ 130 (345)
..+|...||.|+.+|+++.+..- .+..+ .. .-...-+++.+.+++|.+...+++++|.|+|||+|||+|..++.+.+
T Consensus 7 ~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~ 86 (213)
T PF00326_consen 7 AQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHP 86 (213)
T ss_dssp HHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTC
T ss_pred HHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccc
Confidence 45777789999999999865320 01111 11 11234567888889998776788999999999999999999998664
Q ss_pred CCCCCeeeccCCC
Q psy2108 131 PYKLPRITGLDPA 143 (345)
Q Consensus 131 ~~~v~rItgLDPA 143 (345)
++++.++...|.
T Consensus 87 -~~f~a~v~~~g~ 98 (213)
T PF00326_consen 87 -DRFKAAVAGAGV 98 (213)
T ss_dssp -CGSSEEEEESE-
T ss_pred -eeeeeeecccee
Confidence 788888877764
No 86
>KOG4627|consensus
Probab=98.11 E-value=8.9e-06 Score=74.67 Aligned_cols=101 Identities=21% Similarity=0.142 Sum_probs=64.3
Q ss_pred hhc-cCCCccEEEEcC--CCC-----ChHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHh
Q psy2108 30 ILI-RQKTFTNVIYHL--MSI-----SIFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSK 101 (345)
Q Consensus 30 ~~~-~~~~pt~vliHG--~~~-----s~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~ 101 (345)
++. ....+..||||| |.. ....+.. .+ +.+|.|..|||.-- .-.......-.+....++|+.+
T Consensus 60 Iwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~-a~-~~gY~vasvgY~l~-------~q~htL~qt~~~~~~gv~filk 130 (270)
T KOG4627|consen 60 IWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGP-AV-RRGYRVASVGYNLC-------PQVHTLEQTMTQFTHGVNFILK 130 (270)
T ss_pred EecCCCCccEEEEEecchhhcCchhcccchhhh-hh-hcCeEEEEeccCcC-------cccccHHHHHHHHHHHHHHHHH
Confidence 444 335578899998 532 1222233 33 45899999999532 1233344444566677888876
Q ss_pred hcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeecc
Q psy2108 102 YIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGL 140 (345)
Q Consensus 102 ~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgL 140 (345)
.+. +.+++.+-|||.|||+|..+-.+..+.+|..++.+
T Consensus 131 ~~~-n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~ 168 (270)
T KOG4627|consen 131 YTE-NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILL 168 (270)
T ss_pred hcc-cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHH
Confidence 643 46789999999999999988777544444444433
No 87
>KOG1552|consensus
Probab=98.07 E-value=3e-05 Score=73.22 Aligned_cols=101 Identities=16% Similarity=0.044 Sum_probs=75.4
Q ss_pred CCCccEEEEcCCCCChHHHHHHHh---hcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCE
Q psy2108 34 QKTFTNVIYHLMSISIFFISTEYF---KRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDM 110 (345)
Q Consensus 34 ~~~pt~vliHG~~~s~~~l~~a~L---~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~v 110 (345)
...+++++.||......++..-|+ ..-++||+..|++|.|.|..-+ +..++. +++-...++|++..| +.++|
T Consensus 58 ~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~p-sE~n~y---~Di~avye~Lr~~~g-~~~~I 132 (258)
T KOG1552|consen 58 AAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKP-SERNLY---ADIKAVYEWLRNRYG-SPERI 132 (258)
T ss_pred ccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCc-ccccch---hhHHHHHHHHHhhcC-CCceE
Confidence 345899999998654333333222 2247999999999999885433 334444 688888999999888 89999
Q ss_pred EEEEecHHHHHHHHHHHHcCCCCCCeeeccCC
Q psy2108 111 HLIGFSLGAHVAAYTSKYLRPYKLPRITGLDP 142 (345)
Q Consensus 111 hLIGHSLGAhVAg~ag~~~~~~~v~rItgLDP 142 (345)
.|.|+|||+..+-..|.+. + +..++...|
T Consensus 133 il~G~SiGt~~tv~Lasr~--~-~~alVL~SP 161 (258)
T KOG1552|consen 133 ILYGQSIGTVPTVDLASRY--P-LAAVVLHSP 161 (258)
T ss_pred EEEEecCCchhhhhHhhcC--C-cceEEEecc
Confidence 9999999999987777664 2 777777766
No 88
>cd01759 PLAT_PL PLAT/LH2 domain of pancreatic triglyceride lipase. Lipases hydrolyze phospholipids and triglycerides to generate fatty acids for energy production or for storage and to release inositol phosphates that act as second messengers. The central role of triglyceride lipases is in energy production. The proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=98.05 E-value=1.1e-06 Score=73.46 Aligned_cols=50 Identities=18% Similarity=0.256 Sum_probs=42.9
Q ss_pred eEEEEEEeeeeccCcccccCCCeeEEEeecc-cCceeeeec---CCCchhHhHHHHHH
Q psy2108 278 VVFIVSTILLFQMSAATYRKPPFNGSIFGKR-STNTIEFDS---NTGKTFASMCEIAS 331 (345)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~ppf~~sL~Gt~-~~~~i~~~~---~~~~t~~~~~~~~~ 331 (345)
+||||+++++++.+ ++|+|.++|||++ +++++++.. ++|+||+++++...
T Consensus 1 ~~Yqv~V~~s~~~~----~~g~~~vsL~G~~g~s~~~~i~~g~l~pg~tys~li~~d~ 54 (113)
T cd01759 1 WRYKVSVTLSGKKK----VTGTILVSLYGNKGNTRQYEIFKGTLKPGNTYSAFIDVDV 54 (113)
T ss_pred CeEEEEEEEecccc----cCceEEEEEEcCCCCccceEEEeeeecCCCEEEEEEEccC
Confidence 58999998888753 8999999999999 799999984 79999999987654
No 89
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.03 E-value=1.3e-05 Score=75.90 Aligned_cols=101 Identities=16% Similarity=0.106 Sum_probs=67.9
Q ss_pred ccEEEEcCCCCCh---HHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhh--------cCC
Q psy2108 37 FTNVIYHLMSISI---FFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKY--------IGD 105 (345)
Q Consensus 37 pt~vliHG~~~s~---~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~--------~g~ 105 (345)
|.++|+|||..++ .++... +...|+=|++++...... +.. .+. .+..|+.++||.+. -..
T Consensus 47 PVilF~HG~~l~ns~Ys~lL~H-IASHGfIVVAPQl~~~~~----p~~---~~E-i~~aa~V~~WL~~gL~~~Lp~~V~~ 117 (307)
T PF07224_consen 47 PVILFLHGFNLYNSFYSQLLAH-IASHGFIVVAPQLYTLFP----PDG---QDE-IKSAASVINWLPEGLQHVLPENVEA 117 (307)
T ss_pred cEEEEeechhhhhHHHHHHHHH-HhhcCeEEEechhhcccC----CCc---hHH-HHHHHHHHHHHHhhhhhhCCCCccc
Confidence 6788899997653 344443 445689999999876432 111 111 24556666666432 124
Q ss_pred CCCCEEEEEecHHHHHHHHHHHHc-CCCCCCeeeccCCCCCC
Q psy2108 106 VEPDMHLIGFSLGAHVAAYTSKYL-RPYKLPRITGLDPAMPM 146 (345)
Q Consensus 106 ~~~~vhLIGHSLGAhVAg~ag~~~-~~~~v~rItgLDPAgP~ 146 (345)
+++++-|+|||-||..|-.++-.+ ..-++..++||||..-.
T Consensus 118 nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 118 NLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred ccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 789999999999999997666443 23579999999997543
No 90
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.02 E-value=2.9e-05 Score=73.76 Aligned_cols=100 Identities=16% Similarity=0.052 Sum_probs=68.8
Q ss_pred CccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhh----c----C
Q psy2108 36 TFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKY----I----G 104 (345)
Q Consensus 36 ~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~----~----g 104 (345)
-|.+||+||+... ...+... ++..||-|+++|+..... ... ..-.+.++++++||.+. . .
T Consensus 17 yPVv~f~~G~~~~~s~Ys~ll~h-vAShGyIVV~~d~~~~~~----~~~----~~~~~~~~~vi~Wl~~~L~~~l~~~v~ 87 (259)
T PF12740_consen 17 YPVVLFLHGFLLINSWYSQLLEH-VASHGYIVVAPDLYSIGG----PDD----TDEVASAAEVIDWLAKGLESKLPLGVK 87 (259)
T ss_pred cCEEEEeCCcCCCHHHHHHHHHH-HHhCceEEEEecccccCC----CCc----chhHHHHHHHHHHHHhcchhhcccccc
Confidence 4788899998643 4444444 334689999999765322 111 22235667777887542 1 2
Q ss_pred CCCCCEEEEEecHHHHHHHHHHHHcC----CCCCCeeeccCCCC
Q psy2108 105 DVEPDMHLIGFSLGAHVAAYTSKYLR----PYKLPRITGLDPAM 144 (345)
Q Consensus 105 ~~~~~vhLIGHSLGAhVAg~ag~~~~----~~~v~rItgLDPAg 144 (345)
.+++++.|.|||-||.+|-.++.... ..+++.+++|||..
T Consensus 88 ~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 88 PDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred ccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 46789999999999999987765542 24799999999986
No 91
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.99 E-value=7.6e-05 Score=71.05 Aligned_cols=123 Identities=15% Similarity=0.127 Sum_probs=80.3
Q ss_pred CccEEEEcCCCCC---hHHHHHHHhh--cCCeEEEEEcCCCCcCCCCccc--cccCHHHHHHHHHHHHHHHHhhcC---C
Q psy2108 36 TFTNVIYHLMSIS---IFFISTEYFK--RGDYNVWFVNWPELCRGPCYVI--SVYNLEQVGKCVAQMIKRLSKYIG---D 105 (345)
Q Consensus 36 ~pt~vliHG~~~s---~~~l~~a~L~--~~~~NVI~vDw~~~~~s~~Y~~--a~~~~~~vg~~la~~i~~L~~~~g---~ 105 (345)
++.+|+|.|.-+- ..+...++.+ ...+.|+++...|+...+.-.. .......+-++|...++.+.+... .
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 4567889997553 3333333332 3689999999999976542210 012333455666666666654322 1
Q ss_pred CCCCEEEEEecHHHHHHHHHHHHcC--CCCCCeeeccCCCCCCCCCCCCCCCCCc
Q psy2108 106 VEPDMHLIGFSLGAHVAAYTSKYLR--PYKLPRITGLDPAMPMFMSRDRDHRLDS 158 (345)
Q Consensus 106 ~~~~vhLIGHSLGAhVAg~ag~~~~--~~~v~rItgLDPAgP~F~~~~~~~rL~~ 158 (345)
+-.+++|||||+||.|+..+.++++ ..+|.+..+|=|.--.....+...+|.+
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~G~~l~~ 136 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPNGRRLTP 136 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCchhHHHHH
Confidence 4678999999999999999999986 4789999999887544443333334443
No 92
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=97.97 E-value=2.9e-05 Score=70.56 Aligned_cols=106 Identities=13% Similarity=-0.006 Sum_probs=69.8
Q ss_pred CCCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcC-CC-CccccccC--------HHHHHHHHHHHHHHHH
Q psy2108 34 QKTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCR-GP-CYVISVYN--------LEQVGKCVAQMIKRLS 100 (345)
Q Consensus 34 ~~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~-s~-~Y~~a~~~--------~~~vg~~la~~i~~L~ 100 (345)
.+.|.||++|++... ...+++.+. ..||.|+++|+-.... .+ .+...... ...+.+++...+++|.
T Consensus 12 ~~~~~Vvv~~d~~G~~~~~~~~ad~lA-~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~ 90 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNPNIRDLADRLA-EEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLR 90 (218)
T ss_dssp SSEEEEEEE-BTTBS-HHHHHHHHHHH-HTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCchHHHHHHHHHH-hcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 467899999987543 455667654 5689999999755433 11 12211111 2345667777899998
Q ss_pred hhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCC
Q psy2108 101 KYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDP 142 (345)
Q Consensus 101 ~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDP 142 (345)
+....+.++|-+||+|+||.+|..++... .+++..+..=|
T Consensus 91 ~~~~~~~~kig~vGfc~GG~~a~~~a~~~--~~~~a~v~~yg 130 (218)
T PF01738_consen 91 AQPEVDPGKIGVVGFCWGGKLALLLAARD--PRVDAAVSFYG 130 (218)
T ss_dssp CTTTCEEEEEEEEEETHHHHHHHHHHCCT--TTSSEEEEES-
T ss_pred hccccCCCcEEEEEEecchHHhhhhhhhc--cccceEEEEcC
Confidence 76445678999999999999999988653 46777777666
No 93
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.95 E-value=5.5e-05 Score=78.83 Aligned_cols=103 Identities=14% Similarity=0.181 Sum_probs=69.7
Q ss_pred cCCCccEEEEcCCCC--------ChHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcC
Q psy2108 33 RQKTFTNVIYHLMSI--------SIFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIG 104 (345)
Q Consensus 33 ~~~~pt~vliHG~~~--------s~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g 104 (345)
+..+.|+|+|+.|-. .-..+.+ ||...|+.|++|||+.-.... .........+.|.+.|+.+.+..|
T Consensus 212 ~v~~~PLLIVPp~INK~YIlDL~P~~SlVr-~lv~qG~~VflIsW~nP~~~~----r~~~ldDYv~~i~~Ald~V~~~tG 286 (560)
T TIGR01839 212 QQHARPLLVVPPQINKFYIFDLSPEKSFVQ-YCLKNQLQVFIISWRNPDKAH----REWGLSTYVDALKEAVDAVRAITG 286 (560)
T ss_pred CcCCCcEEEechhhhhhheeecCCcchHHH-HHHHcCCeEEEEeCCCCChhh----cCCCHHHHHHHHHHHHHHHHHhcC
Confidence 345678999999731 1233444 444579999999999854431 223334433577778888877654
Q ss_pred CCCCCEEEEEecHHHHHHHH----HHHHcCCCCCCeeeccCC
Q psy2108 105 DVEPDMHLIGFSLGAHVAAY----TSKYLRPYKLPRITGLDP 142 (345)
Q Consensus 105 ~~~~~vhLIGHSLGAhVAg~----ag~~~~~~~v~rItgLDP 142 (345)
.++|+++||||||-++.. ++++.+.++|+.+|.|-.
T Consensus 287 --~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllat 326 (560)
T TIGR01839 287 --SRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVS 326 (560)
T ss_pred --CCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeec
Confidence 689999999999999985 333332247999886543
No 94
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.95 E-value=5.6e-05 Score=85.39 Aligned_cols=101 Identities=20% Similarity=0.213 Sum_probs=73.8
Q ss_pred CCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEE
Q psy2108 35 KTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMH 111 (345)
Q Consensus 35 ~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vh 111 (345)
++++++++||++.+ +..+.. .| ..+++|+++|.++++... .....+..+++++++.++.+. +-..++
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~-~l-~~~~~v~~~~~~g~~~~~---~~~~~l~~la~~~~~~i~~~~-----~~~p~~ 1136 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSR-YL-DPQWSIYGIQSPRPDGPM---QTATSLDEVCEAHLATLLEQQ-----PHGPYH 1136 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHH-hc-CCCCcEEEEECCCCCCCC---CCCCCHHHHHHHHHHHHHhhC-----CCCCEE
Confidence 35789999998764 455554 34 357999999999886431 223567777777777766541 234799
Q ss_pred EEEecHHHHHHHHHHHHcC--CCCCCeeeccCCCCC
Q psy2108 112 LIGFSLGAHVAAYTSKYLR--PYKLPRITGLDPAMP 145 (345)
Q Consensus 112 LIGHSLGAhVAg~ag~~~~--~~~v~rItgLDPAgP 145 (345)
|+||||||.||..++.++. +.++..++.+|+..+
T Consensus 1137 l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~ 1172 (1296)
T PRK10252 1137 LLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWPP 1172 (1296)
T ss_pred EEEechhhHHHHHHHHHHHHcCCceeEEEEecCCCc
Confidence 9999999999999998753 368889998887543
No 95
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=97.95 E-value=5.9e-05 Score=67.33 Aligned_cols=86 Identities=19% Similarity=0.223 Sum_probs=52.7
Q ss_pred EEEEcCCCCC----hH-HHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEE
Q psy2108 39 NVIYHLMSIS----IF-FISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLI 113 (345)
Q Consensus 39 ~vliHG~~~s----~~-~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLI 113 (345)
+++|||+.++ |. -+... +... ++|-..|| ..+ ++.+.+..|.+.....-+++.||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~-l~~~-~~V~~~~~----~~P--------------~~~~W~~~l~~~i~~~~~~~ilV 60 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQ-LENS-VRVEQPDW----DNP--------------DLDEWVQALDQAIDAIDEPTILV 60 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHH-HTTS-EEEEEC------TS----------------HHHHHHHHHHCCHC-TTTEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHh-CCCC-eEEecccc----CCC--------------CHHHHHHHHHHHHhhcCCCeEEE
Confidence 5899999653 44 34444 4433 88988888 222 33445555554433345679999
Q ss_pred EecHHHHHHHHHH-HHcCCCCCCeeeccCCCCC
Q psy2108 114 GFSLGAHVAAYTS-KYLRPYKLPRITGLDPAMP 145 (345)
Q Consensus 114 GHSLGAhVAg~ag-~~~~~~~v~rItgLDPAgP 145 (345)
|||||+..+..+. ... ..+|+++.++-|..+
T Consensus 61 aHSLGc~~~l~~l~~~~-~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 61 AHSLGCLTALRWLAEQS-QKKVAGALLVAPFDP 92 (171)
T ss_dssp EETHHHHHHHHHHHHTC-CSSEEEEEEES--SC
T ss_pred EeCHHHHHHHHHHhhcc-cccccEEEEEcCCCc
Confidence 9999999998777 443 489999999988765
No 96
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.94 E-value=3e-05 Score=70.39 Aligned_cols=97 Identities=21% Similarity=0.195 Sum_probs=75.3
Q ss_pred EEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEe
Q psy2108 39 NVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGF 115 (345)
Q Consensus 39 ~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGH 115 (345)
+|++-|-+.| -..+..+ |++.|+.|+.+|=.. |......-..++.+++++|+...+.. ..+++.|||+
T Consensus 5 ~v~~SGDgGw~~~d~~~a~~-l~~~G~~VvGvdsl~------Yfw~~rtP~~~a~Dl~~~i~~y~~~w--~~~~vvLiGY 75 (192)
T PF06057_consen 5 AVFFSGDGGWRDLDKQIAEA-LAKQGVPVVGVDSLR------YFWSERTPEQTAADLARIIRHYRARW--GRKRVVLIGY 75 (192)
T ss_pred EEEEeCCCCchhhhHHHHHH-HHHCCCeEEEechHH------HHhhhCCHHHHHHHHHHHHHHHHHHh--CCceEEEEee
Confidence 4566664443 5667665 556799999999543 44444555788999999999888764 4689999999
Q ss_pred cHHHHHHHHHHHHcCC---CCCCeeeccCCCC
Q psy2108 116 SLGAHVAAYTSKYLRP---YKLPRITGLDPAM 144 (345)
Q Consensus 116 SLGAhVAg~ag~~~~~---~~v~rItgLDPAg 144 (345)
|.||-|.=++-.+++. .+|..+..|.|+.
T Consensus 76 SFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 76 SFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred cCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 9999999988888873 7899999999974
No 97
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.88 E-value=7.2e-05 Score=73.71 Aligned_cols=111 Identities=14% Similarity=0.091 Sum_probs=79.6
Q ss_pred hhccCCCccEEEEcCCCCChHHHHHH-----HhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcC
Q psy2108 30 ILIRQKTFTNVIYHLMSISIFFISTE-----YFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIG 104 (345)
Q Consensus 30 ~~~~~~~pt~vliHG~~~s~~~l~~a-----~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g 104 (345)
+.+...+..+||+||+..++.+-... .-...+.-.|++-|+..|.-..|..-...+..-...|+.+|..|.+.
T Consensus 110 ~~~s~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~-- 187 (377)
T COG4782 110 ISFSSAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATD-- 187 (377)
T ss_pred ccccCCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhC--
Confidence 33446777899999997653321111 11234567889999999887778766666777788999999999765
Q ss_pred CCCCCEEEEEecHHHHHHHHHHHHcC-------CCCCCeeeccCC
Q psy2108 105 DVEPDMHLIGFSLGAHVAAYTSKYLR-------PYKLPRITGLDP 142 (345)
Q Consensus 105 ~~~~~vhLIGHSLGAhVAg~ag~~~~-------~~~v~rItgLDP 142 (345)
-+.++||||.||||..+...+-+++. +.+|+.++.--|
T Consensus 188 ~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaP 232 (377)
T COG4782 188 KPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAP 232 (377)
T ss_pred CCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCC
Confidence 25899999999999999999888763 134555554433
No 98
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=97.87 E-value=5.8e-05 Score=71.67 Aligned_cols=105 Identities=18% Similarity=0.214 Sum_probs=61.9
Q ss_pred CCccEEEEcCCCCC---hHHHHHHHh-hcC-CeEEEEEc------------CCCCcCCC----Cccccc-cCHHHHHHHH
Q psy2108 35 KTFTNVIYHLMSIS---IFFISTEYF-KRG-DYNVWFVN------------WPELCRGP----CYVISV-YNLEQVGKCV 92 (345)
Q Consensus 35 ~~pt~vliHG~~~s---~~~l~~a~L-~~~-~~NVI~vD------------w~~~~~s~----~Y~~a~-~~~~~vg~~l 92 (345)
..-|.||||||+++ ...|.+++. +.+ .-.|+.++ |......| .|.... .+...-++.+
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 44568999999753 677777665 322 23444443 22222221 111222 3566778999
Q ss_pred HHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCC-C---CCCeeeccC
Q psy2108 93 AQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRP-Y---KLPRITGLD 141 (345)
Q Consensus 93 a~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-~---~v~rItgLD 141 (345)
...|..|.+.+ ..+++.+|||||||.++-++...... . +|.+++.|+
T Consensus 90 ~~vl~~L~~~Y--~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia 140 (255)
T PF06028_consen 90 KKVLKYLKKKY--HFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIA 140 (255)
T ss_dssp HHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES
T ss_pred HHHHHHHHHhc--CCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEec
Confidence 99999998865 57999999999999999877665432 2 456666554
No 99
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=97.85 E-value=0.00014 Score=67.73 Aligned_cols=102 Identities=11% Similarity=0.040 Sum_probs=68.8
Q ss_pred CCccEEEEcCCCCChHHHHH-----HHhhcCCeEEEEEcCCCCcCC-CC---cccccc-CHHHHHHHHHHHHHHHHhhcC
Q psy2108 35 KTFTNVIYHLMSISIFFIST-----EYFKRGDYNVWFVNWPELCRG-PC---YVISVY-NLEQVGKCVAQMIKRLSKYIG 104 (345)
Q Consensus 35 ~~pt~vliHG~~~s~~~l~~-----a~L~~~~~NVI~vDw~~~~~s-~~---Y~~a~~-~~~~vg~~la~~i~~L~~~~g 104 (345)
+.|.+|++||.+.+..++.. ++-.+.++-|+.++....+.. .+ +..... ...+ ...|+.+|+.+.+.++
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d-~~~i~~lv~~v~~~~~ 93 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGD-VAFIAALVDYVAARYN 93 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccc-hhhHHHHHHhHhhhcc
Confidence 56888999999876554433 234456788888886542211 11 111111 1122 3478899999988889
Q ss_pred CCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeee
Q psy2108 105 DVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRIT 138 (345)
Q Consensus 105 ~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rIt 138 (345)
++.++|++.|+|.||..+..++..++ +.+.-+-
T Consensus 94 iD~~RVyv~G~S~Gg~ma~~la~~~p-d~faa~a 126 (220)
T PF10503_consen 94 IDPSRVYVTGLSNGGMMANVLACAYP-DLFAAVA 126 (220)
T ss_pred cCCCceeeEEECHHHHHHHHHHHhCC-ccceEEE
Confidence 99999999999999999998887775 5555433
No 100
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.85 E-value=7.5e-05 Score=68.87 Aligned_cols=125 Identities=10% Similarity=-0.028 Sum_probs=76.0
Q ss_pred cccccccccccchhccCCCccEEEEcCCCCCh-----HHHHHHHhhc---CCeEEEEEcCCCCcCC--CCc--------c
Q psy2108 18 RLRRFYAIVTEEILIRQKTFTNVIYHLMSISI-----FFISTEYFKR---GDYNVWFVNWPELCRG--PCY--------V 79 (345)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~pt~vliHG~~~s~-----~~l~~a~L~~---~~~NVI~vDw~~~~~s--~~Y--------~ 79 (345)
|.++....+..+-.-..+-|+++++||+..+. ....+.+... ...-||++|....... ..+ .
T Consensus 6 ~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~ 85 (251)
T PF00756_consen 6 RDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRA 85 (251)
T ss_dssp EEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBC
T ss_pred CeEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEeccccccccccccccccccccc
Confidence 34444444444444455668899999973321 1222222332 2356777887665411 011 1
Q ss_pred ccccCHHHHHHHH-HHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 80 ISVYNLEQVGKCV-AQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 80 ~a~~~~~~vg~~l-a~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
..........+.| -+++.++++.+....+..-|+|+||||..|..++.+.+ +..+.+.++.|+
T Consensus 86 ~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~P-d~F~~~~~~S~~ 149 (251)
T PF00756_consen 86 DDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHP-DLFGAVIAFSGA 149 (251)
T ss_dssp TSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHST-TTESEEEEESEE
T ss_pred ccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCc-cccccccccCcc
Confidence 1112223333444 36677777776655555899999999999999998875 899999999976
No 101
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.83 E-value=6.3e-05 Score=69.37 Aligned_cols=90 Identities=19% Similarity=0.124 Sum_probs=51.2
Q ss_pred ccEEEEcCCCCC---hHHHHHHHhhc-CCe--EEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCE
Q psy2108 37 FTNVIYHLMSIS---IFFISTEYFKR-GDY--NVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDM 110 (345)
Q Consensus 37 pt~vliHG~~~s---~~~l~~a~L~~-~~~--NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~v 110 (345)
-.+|++||+.++ +..+++.+... +++ ..+.+..... ........++..|+.+++-|....+.......+|
T Consensus 5 hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~----n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~I 80 (217)
T PF05057_consen 5 HLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSN----NEFKTFDGIDVCGERLAEEILEHIKDYESKIRKI 80 (217)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccc----cccccchhhHHHHHHHHHHHHHhccccccccccc
Confidence 358999998765 33344444331 111 1222222111 1122234566677777666655543322234689
Q ss_pred EEEEecHHHHHHHHHHHHcC
Q psy2108 111 HLIGFSLGAHVAAYTSKYLR 130 (345)
Q Consensus 111 hLIGHSLGAhVAg~ag~~~~ 130 (345)
.+|||||||-|+-+|-....
T Consensus 81 sfIgHSLGGli~r~al~~~~ 100 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALGLLH 100 (217)
T ss_pred eEEEecccHHHHHHHHHHhh
Confidence 99999999999998877653
No 102
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=97.76 E-value=0.00013 Score=66.15 Aligned_cols=86 Identities=24% Similarity=0.358 Sum_probs=53.1
Q ss_pred EEEEcCCCCCh-----HHHHHHHhhc--CCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEE
Q psy2108 39 NVIYHLMSISI-----FFISTEYFKR--GDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMH 111 (345)
Q Consensus 39 ~vliHG~~~s~-----~~l~~a~L~~--~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vh 111 (345)
++.+||+.++. ..++ +++.+ .+.+++++|.+.. + . ..++.+.+.+.+. ..+++.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~-~~~~~~~~~~~~~~p~l~~~------p------~---~a~~~l~~~i~~~---~~~~~~ 62 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALK-QYFAEHGPDIQYPCPDLPPF------P------E---EAIAQLEQLIEEL---KPENVV 62 (187)
T ss_pred eEEecCCCCCCCCHHHHHHH-HHHHHhCCCceEECCCCCcC------H------H---HHHHHHHHHHHhC---CCCCeE
Confidence 68899997652 2233 34433 2456676666531 1 1 2223333333332 456699
Q ss_pred EEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCCCC
Q psy2108 112 LIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMPMF 147 (345)
Q Consensus 112 LIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP~F 147 (345)
|||.||||..|.+++.+++ ++. +.+.||-..+
T Consensus 63 liGSSlGG~~A~~La~~~~---~~a-vLiNPav~p~ 94 (187)
T PF05728_consen 63 LIGSSLGGFYATYLAERYG---LPA-VLINPAVRPY 94 (187)
T ss_pred EEEEChHHHHHHHHHHHhC---CCE-EEEcCCCCHH
Confidence 9999999999999998873 444 8889985443
No 103
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.72 E-value=0.00011 Score=68.93 Aligned_cols=146 Identities=14% Similarity=0.076 Sum_probs=84.2
Q ss_pred CCccEEEEcC--CCC-ChHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHH-HHHhhcCCCCCCE
Q psy2108 35 KTFTNVIYHL--MSI-SIFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIK-RLSKYIGDVEPDM 110 (345)
Q Consensus 35 ~~pt~vliHG--~~~-s~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~-~L~~~~g~~~~~v 110 (345)
.++.++.+|= -++ .+..+.. .| ..+..+++|.|+|.+.... -....++..+++.|+.-|. .+ .-..+
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~-~l-p~~iel~avqlPGR~~r~~-ep~~~di~~Lad~la~el~~~~------~d~P~ 76 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSR-RL-PADIELLAVQLPGRGDRFG-EPLLTDIESLADELANELLPPL------LDAPF 76 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHh-hC-CchhheeeecCCCcccccC-CcccccHHHHHHHHHHHhcccc------CCCCe
Confidence 4456777773 332 2555554 34 3579999999999876421 1134556656666555544 22 22369
Q ss_pred EEEEecHHHHHHHHHHHHcCCC--CCCeeeccCCCCCCCCCCCCCCCCCccccceeeEEecCCC----------cCCccc
Q psy2108 111 HLIGFSLGAHVAAYTSKYLRPY--KLPRITGLDPAMPMFMSRDRDHRLDSEDAKFVDVIHTSAF----------VQGQYS 178 (345)
Q Consensus 111 hLIGHSLGAhVAg~ag~~~~~~--~v~rItgLDPAgP~F~~~~~~~rL~~~DA~fVdviHT~~~----------~~G~~~ 178 (345)
-+.||||||.||-.+++++... .+..+....-..|.... .....+.+|++|++-+---+| ..-+.-
T Consensus 77 alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~--~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~L 154 (244)
T COG3208 77 ALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDR--GKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFL 154 (244)
T ss_pred eecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcc--cCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHH
Confidence 9999999999999999987522 12223333333442222 233444588887765433222 112234
Q ss_pred cCCCcccccCCCc
Q psy2108 179 RSGHVDFYMNGGI 191 (345)
Q Consensus 179 piGh~DfypNGG~ 191 (345)
|+=.+||....+.
T Consensus 155 PilRAD~~~~e~Y 167 (244)
T COG3208 155 PILRADFRALESY 167 (244)
T ss_pred HHHHHHHHHhccc
Confidence 5666777777664
No 104
>KOG4391|consensus
Probab=97.71 E-value=2.8e-05 Score=72.02 Aligned_cols=113 Identities=18% Similarity=0.113 Sum_probs=75.9
Q ss_pred ccccccccc---hhccCCCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHH
Q psy2108 21 RFYAIVTEE---ILIRQKTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQ 94 (345)
Q Consensus 21 ~~~~~~~~~---~~~~~~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~ 94 (345)
|+++.|+.+ +.-+..+||++.+|+..++ .-.+++-+...-+.||++|+++|.|.|..-|. ..... -+-..
T Consensus 60 ~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gsps-E~GL~---lDs~a 135 (300)
T KOG4391|consen 60 RTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPS-EEGLK---LDSEA 135 (300)
T ss_pred EcCcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCcc-cccee---ccHHH
Confidence 455666555 2234478999999987543 33444555555689999999999998853332 11111 23344
Q ss_pred HHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeee
Q psy2108 95 MIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRIT 138 (345)
Q Consensus 95 ~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rIt 138 (345)
.|+.|......+-.++.|.|-||||.||-..+.... .++..|+
T Consensus 136 vldyl~t~~~~dktkivlfGrSlGGAvai~lask~~-~ri~~~i 178 (300)
T KOG4391|consen 136 VLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNS-DRISAII 178 (300)
T ss_pred HHHHHhcCccCCcceEEEEecccCCeeEEEeeccch-hheeeee
Confidence 588888766667789999999999999987776543 4555544
No 105
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.70 E-value=0.0002 Score=68.10 Aligned_cols=99 Identities=20% Similarity=0.193 Sum_probs=69.5
Q ss_pred ccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEE
Q psy2108 37 FTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLI 113 (345)
Q Consensus 37 pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLI 113 (345)
||++++|+-.+. +..+.. ++. ....|+.++.++.+... ....+...+++....-|..++ +--.++|+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~-~l~-~~~~v~~l~a~g~~~~~---~~~~~l~~~a~~yv~~Ir~~Q-----P~GPy~L~ 70 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAA-ALG-PLLPVYGLQAPGYGAGE---QPFASLDDMAAAYVAAIRRVQ-----PEGPYVLL 70 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHH-Hhc-cCceeeccccCcccccc---cccCCHHHHHHHHHHHHHHhC-----CCCCEEEE
Confidence 689999987665 444544 443 46889999998875321 123455544444433344442 44589999
Q ss_pred EecHHHHHHHHHHHHcC--CCCCCeeeccCCCCC
Q psy2108 114 GFSLGAHVAAYTSKYLR--PYKLPRITGLDPAMP 145 (345)
Q Consensus 114 GHSLGAhVAg~ag~~~~--~~~v~rItgLDPAgP 145 (345)
||||||-||-.+++++. ++.|.+++.||+..+
T Consensus 71 G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 71 GWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999999998864 468999999999888
No 106
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=97.68 E-value=8.8e-05 Score=74.68 Aligned_cols=105 Identities=12% Similarity=0.152 Sum_probs=65.0
Q ss_pred CCCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCE
Q psy2108 34 QKTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDM 110 (345)
Q Consensus 34 ~~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~v 110 (345)
...|++|++=|.-.. ...+...++...|++++++|.++.|.+..++.. .+...+ ...+|++|.+..-++.++|
T Consensus 188 ~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~-~D~~~l---~~aVLd~L~~~p~VD~~RV 263 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT-QDSSRL---HQAVLDYLASRPWVDHTRV 263 (411)
T ss_dssp S-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S-CCHH---HHHHHHHHHHSTTEEEEEE
T ss_pred CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-cCHHHH---HHHHHHHHhcCCccChhhe
Confidence 344667776666433 233333355567999999999999987544422 233333 3455777766545677899
Q ss_pred EEEEecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 111 HLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 111 hLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
.++|.|+||++|-.++..- +.||+.++.+.|.
T Consensus 264 ~~~G~SfGGy~AvRlA~le-~~RlkavV~~Ga~ 295 (411)
T PF06500_consen 264 GAWGFSFGGYYAVRLAALE-DPRLKAVVALGAP 295 (411)
T ss_dssp EEEEETHHHHHHHHHHHHT-TTT-SEEEEES--
T ss_pred EEEEeccchHHHHHHHHhc-ccceeeEeeeCch
Confidence 9999999999999888653 3799999999885
No 107
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=97.67 E-value=0.00018 Score=56.30 Aligned_cols=61 Identities=13% Similarity=0.104 Sum_probs=44.4
Q ss_pred CCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHH
Q psy2108 35 KTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMI 96 (345)
Q Consensus 35 ~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i 96 (345)
.+.+++++||+... ...++. +|...+++|++.|++++|.|.....-..+...+-+++.+|+
T Consensus 15 ~k~~v~i~HG~~eh~~ry~~~a~-~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 15 PKAVVVIVHGFGEHSGRYAHLAE-FLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CCEEEEEeCCcHHHHHHHHHHHH-HHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 46789999999654 556665 45678999999999999999533333456666666666655
No 108
>KOG1838|consensus
Probab=97.60 E-value=0.00033 Score=70.35 Aligned_cols=90 Identities=17% Similarity=0.203 Sum_probs=62.6
Q ss_pred CCCccEEEEcCCCC-C----hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCC
Q psy2108 34 QKTFTNVIYHLMSI-S----IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEP 108 (345)
Q Consensus 34 ~~~pt~vliHG~~~-s----~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~ 108 (345)
...|++|++||... + +..+.... ++.||+|++++-+|.+.++ -......+..--.++.++++.+++. ++..
T Consensus 123 ~~~P~vvilpGltg~S~~~YVr~lv~~a-~~~G~r~VVfN~RG~~g~~-LtTpr~f~ag~t~Dl~~~v~~i~~~--~P~a 198 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHESYVRHLVHEA-QRKGYRVVVFNHRGLGGSK-LTTPRLFTAGWTEDLREVVNHIKKR--YPQA 198 (409)
T ss_pred CCCcEEEEecCCCCCChhHHHHHHHHHH-HhCCcEEEEECCCCCCCCc-cCCCceeecCCHHHHHHHHHHHHHh--CCCC
Confidence 45699999999743 2 45555543 4568999999999987663 2211111112236888888999775 4788
Q ss_pred CEEEEEecHHHHHHH-HHHH
Q psy2108 109 DMHLIGFSLGAHVAA-YTSK 127 (345)
Q Consensus 109 ~vhLIGHSLGAhVAg-~ag~ 127 (345)
++..+|+||||.+.. |.|.
T Consensus 199 ~l~avG~S~Gg~iL~nYLGE 218 (409)
T KOG1838|consen 199 PLFAVGFSMGGNILTNYLGE 218 (409)
T ss_pred ceEEEEecchHHHHHHHhhh
Confidence 999999999999875 4443
No 109
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.57 E-value=0.00053 Score=64.21 Aligned_cols=105 Identities=10% Similarity=0.071 Sum_probs=72.1
Q ss_pred ccEEEEcCCC---CChHHHHHHHhhcCCeEEEEEcCCC-CcCCCCcc--cc-c-------cCHHHHHHHHHHHHHHHHhh
Q psy2108 37 FTNVIYHLMS---ISIFFISTEYFKRGDYNVWFVNWPE-LCRGPCYV--IS-V-------YNLEQVGKCVAQMIKRLSKY 102 (345)
Q Consensus 37 pt~vliHG~~---~s~~~l~~a~L~~~~~NVI~vDw~~-~~~s~~Y~--~a-~-------~~~~~vg~~la~~i~~L~~~ 102 (345)
|.+|++|++. ...+++.+. |...||-|+++|.-. .+....+. .. . .....+-.++...+++|...
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~r-lA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~ 106 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARR-LAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQ 106 (236)
T ss_pred CEEEEEecccCCchHHHHHHHH-HHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhC
Confidence 8899999864 346777765 556799999999754 22221222 10 1 11145667888889999876
Q ss_pred cCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 103 IGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 103 ~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
.....++|-++|+||||++|..++...+ +++..+..-|..
T Consensus 107 ~~~~~~~ig~~GfC~GG~~a~~~a~~~~--~v~a~v~fyg~~ 146 (236)
T COG0412 107 PQVDPKRIGVVGFCMGGGLALLAATRAP--EVKAAVAFYGGL 146 (236)
T ss_pred CCCCCceEEEEEEcccHHHHHHhhcccC--CccEEEEecCCC
Confidence 4456899999999999999999987532 566666555543
No 110
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=97.53 E-value=0.0011 Score=64.82 Aligned_cols=134 Identities=16% Similarity=0.100 Sum_probs=78.8
Q ss_pred eEEEEEEEEEeecccccccccccchhccCCCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcC-CCCccc-
Q psy2108 6 VYCFTVSLTLNFRLRRFYAIVTEEILIRQKTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCR-GPCYVI- 80 (345)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~-s~~Y~~- 80 (345)
+.|++|++. +..-.+-++.+........+.|.+|.+||.+.. +.+.. .| ...|+-|+++|.++.+. +..+..
T Consensus 54 ~~vy~v~f~-s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~-~~-a~~G~~vl~~d~rGqg~~~~d~~~~ 130 (320)
T PF05448_consen 54 VEVYDVSFE-SFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLL-PW-AAAGYAVLAMDVRGQGGRSPDYRGS 130 (320)
T ss_dssp EEEEEEEEE-EGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHH-HH-HHTT-EEEEE--TTTSSSS-B-SSB
T ss_pred EEEEEEEEE-ccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCccccc-cc-ccCCeEEEEecCCCCCCCCCCcccc
Confidence 456677775 333344444444223234566889999998654 22221 23 35689999999999872 211110
Q ss_pred -----------cccC------HHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 81 -----------SVYN------LEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 81 -----------a~~~------~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
...+ .+.+-.+.-..+++|.....++.++|.+.|.|.||.++..++..- .+|+++...-|+
T Consensus 131 ~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd--~rv~~~~~~vP~ 208 (320)
T PF05448_consen 131 SGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALD--PRVKAAAADVPF 208 (320)
T ss_dssp SSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS--ST-SEEEEESES
T ss_pred CCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhC--ccccEEEecCCC
Confidence 0111 233445666777888766566778999999999999999998853 578887777765
Q ss_pred C
Q psy2108 144 M 144 (345)
Q Consensus 144 g 144 (345)
.
T Consensus 209 l 209 (320)
T PF05448_consen 209 L 209 (320)
T ss_dssp S
T ss_pred c
Confidence 4
No 111
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.49 E-value=0.0013 Score=66.60 Aligned_cols=119 Identities=9% Similarity=0.059 Sum_probs=71.5
Q ss_pred cccccccccchhccCCCccEEEEcCC--CC--ChHHHHHHHhhcCC---eEEEEEcCCCC-cCCCCccccccCHHHHHHH
Q psy2108 20 RRFYAIVTEEILIRQKTFTNVIYHLM--SI--SIFFISTEYFKRGD---YNVWFVNWPEL-CRGPCYVISVYNLEQVGKC 91 (345)
Q Consensus 20 ~~~~~~~~~~~~~~~~~pt~vliHG~--~~--s~~~l~~a~L~~~~---~NVI~vDw~~~-~~s~~Y~~a~~~~~~vg~~ 91 (345)
++.+.....+-. ..+.|+++++||- .. ....+.+.+.+.+. .-|+.+|-... .+...++... ......
T Consensus 194 r~v~VY~P~~y~-~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~---~f~~~l 269 (411)
T PRK10439 194 RRVWIYTTGDAA-PEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNA---DFWLAV 269 (411)
T ss_pred eEEEEEECCCCC-CCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchH---HHHHHH
Confidence 444444443322 4567899999993 22 24445555555432 34667775321 1221232211 111122
Q ss_pred HHHHHHHHHhhcCC--CCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 92 VAQMIKRLSKYIGD--VEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 92 la~~i~~L~~~~g~--~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
+.+++-++.+.+.+ +.++..|+|+||||..|.+++-+.+ ++.+++..+.|+
T Consensus 270 ~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~P-d~Fg~v~s~Sgs 322 (411)
T PRK10439 270 QQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWP-ERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCc-ccccEEEEeccc
Confidence 24445555555443 5678999999999999999998875 899999999987
No 112
>cd01758 PLAT_LPL PLAT/ LH2 domain present in lipoprotein lipase (LPL). LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs) and has therefeore has a profound influence on triglyceride and high-density lipoprotein (HDL) cholesterol levels in the blood. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=97.48 E-value=4.6e-05 Score=65.86 Aligned_cols=52 Identities=13% Similarity=0.206 Sum_probs=43.3
Q ss_pred eEEEEEEeeeeccCcccccCCCeeEEEeecc-cCceeeeec----CCCchhHhHHHHH
Q psy2108 278 VVFIVSTILLFQMSAATYRKPPFNGSIFGKR-STNTIEFDS----NTGKTFASMCEIA 330 (345)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~ppf~~sL~Gt~-~~~~i~~~~----~~~~t~~~~~~~~ 330 (345)
|||||++++.++. ++..+++.+.++|||++ +++++++.. .+|+|++|+++..
T Consensus 1 yhYqVtV~~~~~~-~~~~t~~~v~i~L~G~~g~S~~~~l~~~~~~~~G~t~sfLi~t~ 57 (137)
T cd01758 1 FHYQLKIHFFNQT-NRIETDPTFTISLYGTLGESENLPLTLPEGITGNKTNSFLITTE 57 (137)
T ss_pred CeEEEEEEEeccc-CCCcccceEEEEEEcCCCcccCEEEecCcccCCCCeEEEEEECC
Confidence 6899999888876 45568999999999999 799999972 4899999987643
No 113
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.47 E-value=0.00086 Score=64.68 Aligned_cols=117 Identities=16% Similarity=0.117 Sum_probs=78.2
Q ss_pred EEEEEeecccccccccccchhccCCCccEEEEcCCCCChHHHH-----HHHhhcCCeEEEEEc-----CCCCcCCCCccc
Q psy2108 11 VSLTLNFRLRRFYAIVTEEILIRQKTFTNVIYHLMSISIFFIS-----TEYFKRGDYNVWFVN-----WPELCRGPCYVI 80 (345)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~pt~vliHG~~~s~~~l~-----~a~L~~~~~NVI~vD-----w~~~~~s~~Y~~ 80 (345)
-|+.-+.+.+.+.-.+....+- +.|.+|++||-.++-..+. +++..++++=|..+| |..-+.-..|..
T Consensus 38 ~s~~~~g~~r~y~l~vP~g~~~--~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p 115 (312)
T COG3509 38 ASFDVNGLKRSYRLYVPPGLPS--GAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGP 115 (312)
T ss_pred cccccCCCccceEEEcCCCCCC--CCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCc
Confidence 4667777777776666644433 3378889999765422111 334456788888886 311111112211
Q ss_pred c--ccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcC
Q psy2108 81 S--VYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLR 130 (345)
Q Consensus 81 a--~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~ 130 (345)
+ ...+.+|+ .|++++..|..++++++++|++.|.|-||.+|..++-..+
T Consensus 116 ~~~~~g~ddVg-flr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p 166 (312)
T COG3509 116 ADRRRGVDDVG-FLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYP 166 (312)
T ss_pred ccccCCccHHH-HHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCc
Confidence 1 44556665 7888899999889999999999999999999998887654
No 114
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=97.46 E-value=0.00039 Score=69.59 Aligned_cols=108 Identities=18% Similarity=0.044 Sum_probs=58.0
Q ss_pred CCCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCcc--ccc-------------------c------
Q psy2108 34 QKTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYV--ISV-------------------Y------ 83 (345)
Q Consensus 34 ~~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~--~a~-------------------~------ 83 (345)
.+-|++||-||++++ ...+...+- ..||=|++||.+.......|. ... .
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLA-S~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELA-SHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHH-HTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHH-hCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 566889999998754 555666544 468999999999764321111 000 0
Q ss_pred ----CHHHH---HHHHHHHHHHHHhh--------------------cCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCe
Q psy2108 84 ----NLEQV---GKCVAQMIKRLSKY--------------------IGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPR 136 (345)
Q Consensus 84 ----~~~~v---g~~la~~i~~L~~~--------------------~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~r 136 (345)
....+ .+++...++.|.+. ..+++++|.++|||+||..|..+++.- .+++.
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d--~r~~~ 254 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD--TRFKA 254 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH---TT--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc--cCcce
Confidence 00112 23344455555420 013467899999999999999888763 68999
Q ss_pred eeccCCCC
Q psy2108 137 ITGLDPAM 144 (345)
Q Consensus 137 ItgLDPAg 144 (345)
.+.|||..
T Consensus 255 ~I~LD~W~ 262 (379)
T PF03403_consen 255 GILLDPWM 262 (379)
T ss_dssp EEEES---
T ss_pred EEEeCCcc
Confidence 99999974
No 115
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.44 E-value=0.00054 Score=69.96 Aligned_cols=105 Identities=14% Similarity=0.028 Sum_probs=64.2
Q ss_pred CCCccEEEEcCC----CCChHHHHHHHhhcCC-eEEEEEcCCCCcCCCCccc-----cccCHHHHHHHHHHHHHHHHh--
Q psy2108 34 QKTFTNVIYHLM----SISIFFISTEYFKRGD-YNVWFVNWPELCRGPCYVI-----SVYNLEQVGKCVAQMIKRLSK-- 101 (345)
Q Consensus 34 ~~~pt~vliHG~----~~s~~~l~~a~L~~~~-~NVI~vDw~~~~~s~~Y~~-----a~~~~~~vg~~la~~i~~L~~-- 101 (345)
.+.|++|+|||- +.........+.++.+ +-|+.++++-.... |.. ...|.. -.+....|+|+++
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~~~~vv~~~yRlg~~g--~~~~~~~~~~~n~g--~~D~~~al~wv~~~i 168 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLYPGDGLAREGDNVIVVSINYRLGVLG--FLSTGDIELPGNYG--LKDQRLALKWVQDNI 168 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCCChHHHHhcCCCEEEEEecccccccc--cccCCCCCCCcchh--HHHHHHHHHHHHHHH
Confidence 467999999983 2221111223444445 89999999843221 111 111222 2466666788865
Q ss_pred -hcCCCCCCEEEEEecHHHHHHHHHHHHcC-CCCCCeeeccCC
Q psy2108 102 -YIGDVEPDMHLIGFSLGAHVAAYTSKYLR-PYKLPRITGLDP 142 (345)
Q Consensus 102 -~~g~~~~~vhLIGHSLGAhVAg~ag~~~~-~~~v~rItgLDP 142 (345)
.+|.++++|+|+|||.||+.+......-. .+.+.|.+.+..
T Consensus 169 ~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg 211 (493)
T cd00312 169 AAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSG 211 (493)
T ss_pred HHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcC
Confidence 35789999999999999999987765421 234666665543
No 116
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=97.32 E-value=0.00085 Score=68.52 Aligned_cols=92 Identities=11% Similarity=0.037 Sum_probs=61.8
Q ss_pred hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHH
Q psy2108 49 IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKY 128 (345)
Q Consensus 49 ~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~ 128 (345)
+..+.++ |.+.+|. ...|..+++.+..+ + .......++++++|+.+.+.. +.++++||||||||.++-.+...
T Consensus 110 ~~~li~~-L~~~GY~-~~~dL~g~gYDwR~--~-~~~~~~~~~Lk~lIe~~~~~~--g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 110 FHDMIEQ-LIKWGYK-EGKTLFGFGYDFRQ--S-NRLPETMDGLKKKLETVYKAS--GGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHH-HHHcCCc-cCCCcccCCCCccc--c-ccHHHHHHHHHHHHHHHHHHc--CCCCEEEEEECHhHHHHHHHHHH
Confidence 6677775 4456664 47888887765222 1 123444577888888776553 35789999999999999977765
Q ss_pred cC---CCCCCeeeccCCCCCCCCCC
Q psy2108 129 LR---PYKLPRITGLDPAMPMFMSR 150 (345)
Q Consensus 129 ~~---~~~v~rItgLDPAgP~F~~~ 150 (345)
.+ .+.|++++.| |+| |.+.
T Consensus 183 ~p~~~~k~I~~~I~l--a~P-~~Gs 204 (440)
T PLN02733 183 HSDVFEKYVNSWIAI--AAP-FQGA 204 (440)
T ss_pred CCHhHHhHhccEEEE--CCC-CCCC
Confidence 43 1458888888 444 4443
No 117
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.31 E-value=0.0014 Score=64.53 Aligned_cols=69 Identities=23% Similarity=0.221 Sum_probs=55.6
Q ss_pred HhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHh-hcCCCCCCEEEEEecHHHHHHHHHHHH
Q psy2108 56 YFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSK-YIGDVEPDMHLIGFSLGAHVAAYTSKY 128 (345)
Q Consensus 56 ~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~-~~g~~~~~vhLIGHSLGAhVAg~ag~~ 128 (345)
+...-+.||++.+++|.+.|...+ +...+.++-...+++|++ ..|.++++|.+-||||||.|++.|.+.
T Consensus 166 ~ak~~~aNvl~fNYpGVg~S~G~~----s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 166 FAKELGANVLVFNYPGVGSSTGPP----SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred HHHHcCCcEEEECCCccccCCCCC----CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHh
Confidence 334568999999999999886443 346777777888999975 347889999999999999999987664
No 118
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.29 E-value=0.0013 Score=66.30 Aligned_cols=99 Identities=16% Similarity=0.257 Sum_probs=70.2
Q ss_pred CccEEEEcCCCC--------ChHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHH-HHHHHHHHHHHhhcCCC
Q psy2108 36 TFTNVIYHLMSI--------SIFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVG-KCVAQMIKRLSKYIGDV 106 (345)
Q Consensus 36 ~pt~vliHG~~~--------s~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg-~~la~~i~~L~~~~g~~ 106 (345)
.+++++||-|.. ....+.. +|.+.+..|.++||..- .+..+..+..+.- +.+.+-|+..++.+|
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~-~l~~~g~~vfvIsw~nP----d~~~~~~~~edYi~e~l~~aid~v~~itg-- 179 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVR-WLLEQGLDVFVISWRNP----DASLAAKNLEDYILEGLSEAIDTVKDITG-- 179 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHH-HHHHcCCceEEEeccCc----hHhhhhccHHHHHHHHHHHHHHHHHHHhC--
Confidence 467999998742 1233333 45567899999999863 3444455554433 666667777776654
Q ss_pred CCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccC
Q psy2108 107 EPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLD 141 (345)
Q Consensus 107 ~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLD 141 (345)
.++|++|||+.||.++..+..+++.++|+.+|.|-
T Consensus 180 ~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lt 214 (445)
T COG3243 180 QKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLT 214 (445)
T ss_pred ccccceeeEecchHHHHHHHHhhhhcccccceeee
Confidence 68999999999999998888887644588888753
No 119
>KOG1515|consensus
Probab=97.28 E-value=0.0019 Score=63.70 Aligned_cols=105 Identities=16% Similarity=0.035 Sum_probs=69.3
Q ss_pred CCCccEEEEcCCC----C--C--hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHH-HHhhcC
Q psy2108 34 QKTFTNVIYHLMS----I--S--IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKR-LSKYIG 104 (345)
Q Consensus 34 ~~~pt~vliHG~~----~--s--~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~-L~~~~g 104 (345)
.+.|.+|++||-+ + + ...+.....++-+..|+.|||+-.-+. .||.+-.+. =..+-.+.+. +.+ .+
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh-~~Pa~y~D~---~~Al~w~~~~~~~~-~~ 162 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEH-PFPAAYDDG---WAALKWVLKNSWLK-LG 162 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCC-CCCccchHH---HHHHHHHHHhHHHH-hC
Confidence 5778999999832 1 1 233333333456899999999976665 477554322 2333333332 222 37
Q ss_pred CCCCCEEEEEecHHHHHHHHHHHHcCC-----CCCCeeeccCCC
Q psy2108 105 DVEPDMHLIGFSLGAHVAAYTSKYLRP-----YKLPRITGLDPA 143 (345)
Q Consensus 105 ~~~~~vhLIGHSLGAhVAg~ag~~~~~-----~~v~rItgLDPA 143 (345)
+++++|.|.|-|.||.||-.++.+... -+|..++.+=|.
T Consensus 163 ~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~ 206 (336)
T KOG1515|consen 163 ADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPF 206 (336)
T ss_pred CCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecc
Confidence 899999999999999999988887652 456777777664
No 120
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.28 E-value=0.00068 Score=66.74 Aligned_cols=101 Identities=15% Similarity=0.174 Sum_probs=68.8
Q ss_pred CccEEEEcCCCCC---hHHHHHHHhhcCCeE---EEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCC
Q psy2108 36 TFTNVIYHLMSIS---IFFISTEYFKRGDYN---VWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPD 109 (345)
Q Consensus 36 ~pt~vliHG~~~s---~~~l~~a~L~~~~~N---VI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~ 109 (345)
..++|++||.... +..+.. ++...++. |..+++++. .. .++. ...++++...|+......| .++
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~-~~-~~~~-----~~~~~ql~~~V~~~l~~~g--a~~ 128 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDY-RLAILGWLTNGVYAFELSGG-DG-TYSL-----AVRGEQLFAYVDEVLAKTG--AKK 128 (336)
T ss_pred CceEEEEccCcCCcchhhhhhh-hhcchHHHhccccccccccc-CC-Cccc-----cccHHHHHHHHHHHHhhcC--CCc
Confidence 4589999997432 344433 35555555 888888765 22 2332 2345666666666655533 589
Q ss_pred EEEEEecHHHHHHHHHHHHcC-CCCCCeeeccCCCCCC
Q psy2108 110 MHLIGFSLGAHVAAYTSKYLR-PYKLPRITGLDPAMPM 146 (345)
Q Consensus 110 vhLIGHSLGAhVAg~ag~~~~-~~~v~rItgLDPAgP~ 146 (345)
+.||||||||-++-++...++ ..+|.+++.|-+.-..
T Consensus 129 v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 129 VNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred eEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 999999999999998888764 2689999988876544
No 121
>PRK04940 hypothetical protein; Provisional
Probab=97.20 E-value=0.0023 Score=57.83 Aligned_cols=33 Identities=18% Similarity=0.204 Sum_probs=27.9
Q ss_pred CCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 108 PDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 108 ~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
+++.|||.||||.-|-+.+.+++ + |-+.++||-
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g---~-~aVLiNPAv 92 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG---I-RQVIFNPNL 92 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC---C-CEEEECCCC
Confidence 57999999999999999998864 3 667888884
No 122
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.20 E-value=0.0022 Score=63.31 Aligned_cols=108 Identities=13% Similarity=0.052 Sum_probs=70.8
Q ss_pred ccCCCccEEEEcCCCCC--h---HHHHHHHhhcCCeEEEEEcCCCCcCCC-Cc--cccccCHH-------HHHHHHHHHH
Q psy2108 32 IRQKTFTNVIYHLMSIS--I---FFISTEYFKRGDYNVWFVNWPELCRGP-CY--VISVYNLE-------QVGKCVAQMI 96 (345)
Q Consensus 32 ~~~~~pt~vliHG~~~s--~---~~l~~a~L~~~~~NVI~vDw~~~~~s~-~Y--~~a~~~~~-------~vg~~la~~i 96 (345)
..+.+|..|.+.|.+.. + ..|+..+++. |.+-+++--+-++.-. .. -....++. ..-.+.+.++
T Consensus 88 ~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~-gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll 166 (348)
T PF09752_consen 88 DSPYRPVCIHLAGTGDHGFWRRRRLMARPLLKE-GIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALL 166 (348)
T ss_pred ccCCCceEEEecCCCccchhhhhhhhhhHHHHc-CcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHH
Confidence 34557888888887754 1 2235556654 8888888866665421 00 00111221 1234667889
Q ss_pred HHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 97 KRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 97 ~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
.||+++ | ..++-|.|.|||||+|..++...+ ..|.-+-.|.|+.
T Consensus 167 ~Wl~~~-G--~~~~g~~G~SmGG~~A~laa~~~p-~pv~~vp~ls~~s 210 (348)
T PF09752_consen 167 HWLERE-G--YGPLGLTGISMGGHMAALAASNWP-RPVALVPCLSWSS 210 (348)
T ss_pred HHHHhc-C--CCceEEEEechhHhhHHhhhhcCC-CceeEEEeecccC
Confidence 999887 5 569999999999999999998875 6677666666654
No 123
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=97.16 E-value=0.0011 Score=65.54 Aligned_cols=103 Identities=15% Similarity=0.091 Sum_probs=67.9
Q ss_pred CCCccEEEEcCCCC--------------ChHHHHHH--HhhcCCeEEEEEcCCCCcCCCC-----ccc--------cccC
Q psy2108 34 QKTFTNVIYHLMSI--------------SIFFISTE--YFKRGDYNVWFVNWPELCRGPC-----YVI--------SVYN 84 (345)
Q Consensus 34 ~~~pt~vliHG~~~--------------s~~~l~~a--~L~~~~~NVI~vDw~~~~~s~~-----Y~~--------a~~~ 84 (345)
.+...++++|+++. ||..+.-. -+....|-||++|-.|...... -+. +...
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t 128 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT 128 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence 55667899999864 55554322 2344579999999888652211 111 2233
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCEE-EEEecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 85 LEQVGKCVAQMIKRLSKYIGDVEPDMH-LIGFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 85 ~~~vg~~la~~i~~L~~~~g~~~~~vh-LIGHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
+++..+.-..+++.| ..++++ +||-||||+.|...+..++ ++|++++-|-.+
T Consensus 129 i~D~V~aq~~ll~~L------GI~~l~avvGgSmGGMqaleWa~~yP-d~V~~~i~ia~~ 181 (368)
T COG2021 129 IRDMVRAQRLLLDAL------GIKKLAAVVGGSMGGMQALEWAIRYP-DRVRRAIPIATA 181 (368)
T ss_pred HHHHHHHHHHHHHhc------CcceEeeeeccChHHHHHHHHHHhCh-HHHhhhheeccc
Confidence 433332223344444 578888 9999999999999998885 899999987664
No 124
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.12 E-value=0.0047 Score=53.85 Aligned_cols=89 Identities=15% Similarity=0.105 Sum_probs=57.5
Q ss_pred hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHH
Q psy2108 49 IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKY 128 (345)
Q Consensus 49 ~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~ 128 (345)
+..+... +. .+++|+++|.++++.+... ......+.+.+ ++.+.+. .+..+++++||||||.+|...+..
T Consensus 15 ~~~~~~~-l~-~~~~v~~~~~~g~~~~~~~---~~~~~~~~~~~---~~~l~~~--~~~~~~~l~g~s~Gg~~a~~~a~~ 84 (212)
T smart00824 15 YARLAAA-LR-GRRDVSALPLPGFGPGEPL---PASADALVEAQ---AEAVLRA--AGGRPFVLVGHSSGGLLAHAVAAR 84 (212)
T ss_pred HHHHHHh-cC-CCccEEEecCCCCCCCCCC---CCCHHHHHHHH---HHHHHHh--cCCCCeEEEEECHHHHHHHHHHHH
Confidence 4455443 43 4689999999988654211 22333333333 3333332 134679999999999999988887
Q ss_pred cC--CCCCCeeeccCCCCCCC
Q psy2108 129 LR--PYKLPRITGLDPAMPMF 147 (345)
Q Consensus 129 ~~--~~~v~rItgLDPAgP~F 147 (345)
+. +.++..++.+|+..|..
T Consensus 85 l~~~~~~~~~l~~~~~~~~~~ 105 (212)
T smart00824 85 LEARGIPPAAVVLLDTYPPGD 105 (212)
T ss_pred HHhCCCCCcEEEEEccCCCCC
Confidence 53 35788898888866543
No 125
>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain. This family contains two major subgroups, the lipoprotein lipase (LPL) and the pancreatic triglyceride lipase. LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs). The central role of triglyceride lipases is in energy production. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=97.11 E-value=0.00025 Score=59.82 Aligned_cols=52 Identities=15% Similarity=0.191 Sum_probs=43.0
Q ss_pred eEEEEEEeeeeccCcccccCCCeeEEEeecc-cCceeeeec---CCCchhHhHHHHHH
Q psy2108 278 VVFIVSTILLFQMSAATYRKPPFNGSIFGKR-STNTIEFDS---NTGKTFASMCEIAS 331 (345)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~ppf~~sL~Gt~-~~~~i~~~~---~~~~t~~~~~~~~~ 331 (345)
|||||++++.+.++ + .+++++.++|||++ +++++++.. .+|++++|+++...
T Consensus 1 ~hY~vtV~~~~~~~-a-gt~~~v~v~L~G~~g~s~~~~l~~~~~~~g~~~sfli~t~~ 56 (120)
T cd01755 1 WHYQVKVHLSGKKN-L-EVDGTFTVSLYGTKGETEQLPIVLGELKPNKTYSFLIDTEV 56 (120)
T ss_pred CEEEEEEEEeCccc-c-CcCccEEEEEEcCCCCcccEEEeCCcccCCCEEEEEEEcCC
Confidence 58999988887763 3 78999999999999 789999873 68899999876543
No 126
>KOG3724|consensus
Probab=97.01 E-value=0.0023 Score=68.54 Aligned_cols=129 Identities=15% Similarity=0.055 Sum_probs=74.0
Q ss_pred EEEEEEEeecccccccccccchh-------ccCCCccEEEEcCCCCChHHHH---HH----H-----------hhcCCeE
Q psy2108 9 FTVSLTLNFRLRRFYAIVTEEIL-------IRQKTFTNVIYHLMSISIFFIS---TE----Y-----------FKRGDYN 63 (345)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~pt~vliHG~~~s~~~l~---~a----~-----------L~~~~~N 63 (345)
.|++..|-.+.+++--.+..|.. ++..+-|++||.|..+|..+++ .+ | .....+.
T Consensus 55 i~i~~r~t~~a~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~D 134 (973)
T KOG3724|consen 55 IEIPERLTPQADKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFD 134 (973)
T ss_pred cCCcccccCCCCceEEEEecccccccccccccCCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccc
Confidence 46666677777776666544422 3345568999999876643332 11 1 1123467
Q ss_pred EEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHH----hhcCCC---CCCEEEEEecHHHHHHHHHHHH--cCCCCC
Q psy2108 64 VWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLS----KYIGDV---EPDMHLIGFSLGAHVAAYTSKY--LRPYKL 134 (345)
Q Consensus 64 VI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~----~~~g~~---~~~vhLIGHSLGAhVAg~ag~~--~~~~~v 134 (345)
.++||..+.-.. -+ .....+-++.|-+.|..+. .+...+ +..|.||||||||.||-.+... ...+.|
T Consensus 135 FFaVDFnEe~tA-m~---G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sV 210 (973)
T KOG3724|consen 135 FFAVDFNEEFTA-MH---GHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSV 210 (973)
T ss_pred eEEEcccchhhh-hc---cHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchh
Confidence 888888763221 11 1222333344444444433 211223 6789999999999999877643 113567
Q ss_pred CeeeccC
Q psy2108 135 PRITGLD 141 (345)
Q Consensus 135 ~rItgLD 141 (345)
..|+-|.
T Consensus 211 ntIITls 217 (973)
T KOG3724|consen 211 NTIITLS 217 (973)
T ss_pred hhhhhhc
Confidence 7776554
No 127
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.01 E-value=0.0025 Score=63.67 Aligned_cols=103 Identities=12% Similarity=-0.014 Sum_probs=57.4
Q ss_pred cCCCccEEEEcCCCCC---------------------hHHHHHHHhhcCCeEEEEEcCCCCcCCC--Ccccc--------
Q psy2108 33 RQKTFTNVIYHLMSIS---------------------IFFISTEYFKRGDYNVWFVNWPELCRGP--CYVIS-------- 81 (345)
Q Consensus 33 ~~~~pt~vliHG~~~s---------------------~~~l~~a~L~~~~~NVI~vDw~~~~~s~--~Y~~a-------- 81 (345)
+..-|.+|++||.+.. ...+.. +|.+.||-|+++|-.+.|... .+...
T Consensus 112 ~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~-~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~ 190 (390)
T PF12715_consen 112 KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGD-QLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQA 190 (390)
T ss_dssp -S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHH-HHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHH
T ss_pred CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHH-HHHhCCCEEEEEccccccccccccccccccchhHHH
Confidence 3445889999986421 122344 466789999999988877531 11110
Q ss_pred -ccCHHHHH--------HHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeee
Q psy2108 82 -VYNLEQVG--------KCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRIT 138 (345)
Q Consensus 82 -~~~~~~vg--------~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rIt 138 (345)
..+.-..| .+.-..+++|...-.++.++|-++||||||..+.+++.. .+||.-.+
T Consensus 191 la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaAL--DdRIka~v 254 (390)
T PF12715_consen 191 LARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAAL--DDRIKATV 254 (390)
T ss_dssp HHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH---TT--EEE
T ss_pred HHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHc--chhhHhHh
Confidence 01111112 223345666765556788999999999999999999975 35775443
No 128
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=96.94 E-value=0.013 Score=59.37 Aligned_cols=96 Identities=18% Similarity=0.213 Sum_probs=62.9
Q ss_pred CccEEEEcCCCCC----hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEE
Q psy2108 36 TFTNVIYHLMSIS----IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMH 111 (345)
Q Consensus 36 ~pt~vliHG~~~s----~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vh 111 (345)
.|++|+|--++.. .+.+.+.+| . |+.|.++||..-...+ .........+..+.|.++|+.+ | .+ +|
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll-~-g~dVYl~DW~~p~~vp-~~~~~f~ldDYi~~l~~~i~~~----G--~~-v~ 171 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALL-P-DHDVYITDWVNARMVP-LSAGKFDLEDYIDYLIEFIRFL----G--PD-IH 171 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHh-C-CCcEEEEeCCCCCCCc-hhcCCCCHHHHHHHHHHHHHHh----C--CC-Cc
Confidence 4789999887754 244455555 4 8999999998754331 2223334444334555555544 3 45 99
Q ss_pred EEEecHHHHHHHHHHHHcC----CCCCCeeeccC
Q psy2108 112 LIGFSLGAHVAAYTSKYLR----PYKLPRITGLD 141 (345)
Q Consensus 112 LIGHSLGAhVAg~ag~~~~----~~~v~rItgLD 141 (345)
|+|+++||-.+..+...+. +.+++.+|.+-
T Consensus 172 l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~ 205 (406)
T TIGR01849 172 VIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMG 205 (406)
T ss_pred EEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEe
Confidence 9999999999877776653 13688888653
No 129
>KOG2624|consensus
Probab=96.84 E-value=0.0012 Score=66.66 Aligned_cols=108 Identities=18% Similarity=0.178 Sum_probs=73.5
Q ss_pred CCCccEEEEcCCCCC---------hHHHHHHHhhcCCeEEEEEcCCCCcCCC---Ccccc------ccCHHHHH-HHHHH
Q psy2108 34 QKTFTNVIYHLMSIS---------IFFISTEYFKRGDYNVWFVNWPELCRGP---CYVIS------VYNLEQVG-KCVAQ 94 (345)
Q Consensus 34 ~~~pt~vliHG~~~s---------~~~l~~a~L~~~~~NVI~vDw~~~~~s~---~Y~~a------~~~~~~vg-~~la~ 94 (345)
.++|++++.||...+ ...+.- .|...||.|..-+-+|.--+. .+... ......+| .+|..
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf-~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA 149 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAF-LLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPA 149 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHH-HHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHH
Confidence 788999999997422 122322 355679999988888732220 11110 11233333 48889
Q ss_pred HHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcC--CCCCCeeeccCCCC
Q psy2108 95 MIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLR--PYKLPRITGLDPAM 144 (345)
Q Consensus 95 ~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~--~~~v~rItgLDPAg 144 (345)
+|+.+.+.+ ..+++|.||||.|.-+.-.+...-+ ..||+...+|.|+.
T Consensus 150 ~IdyIL~~T--~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 150 MIDYILEKT--GQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred HHHHHHHhc--cccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 999998776 4799999999999998866655432 26899999999997
No 130
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=96.84 E-value=0.0058 Score=57.75 Aligned_cols=109 Identities=8% Similarity=-0.120 Sum_probs=71.1
Q ss_pred ccCCCccEEEEcCCCCCh---HHHHHH---------HhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHH
Q psy2108 32 IRQKTFTNVIYHLMSISI---FFISTE---------YFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRL 99 (345)
Q Consensus 32 ~~~~~pt~vliHG~~~s~---~~l~~a---------~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L 99 (345)
...+.|+||..|+++... ...... .+.+.||.|+++|-++.+.|....... -+.=+++..+.|+||
T Consensus 16 ~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~--~~~e~~D~~d~I~W~ 93 (272)
T PF02129_consen 16 GGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM--SPNEAQDGYDTIEWI 93 (272)
T ss_dssp TSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--SHHHHHHHHHHHHHH
T ss_pred CCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--ChhHHHHHHHHHHHH
Confidence 445668899999987532 111110 144579999999999998875332221 344568999999999
Q ss_pred HhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 100 SKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 100 ~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
.+. ..+-.+|=++|.|-+|..+-.++..-+ ..|+-|+...+..
T Consensus 94 ~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~-p~LkAi~p~~~~~ 136 (272)
T PF02129_consen 94 AAQ-PWSNGKVGMYGISYGGFTQWAAAARRP-PHLKAIVPQSGWS 136 (272)
T ss_dssp HHC-TTEEEEEEEEEETHHHHHHHHHHTTT--TTEEEEEEESE-S
T ss_pred HhC-CCCCCeEEeeccCHHHHHHHHHHhcCC-CCceEEEecccCC
Confidence 875 333458999999999999999887433 5666666555443
No 131
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=96.78 E-value=0.0037 Score=66.34 Aligned_cols=90 Identities=13% Similarity=-0.068 Sum_probs=59.3
Q ss_pred CccEEEEcCCC-----CChHHHHHHHhhcCCeEEEEEcCCCCcCCCCcccc----cc--CHHHHHHHHHHHHHHHHhhcC
Q psy2108 36 TFTNVIYHLMS-----ISIFFISTEYFKRGDYNVWFVNWPELCRGPCYVIS----VY--NLEQVGKCVAQMIKRLSKYIG 104 (345)
Q Consensus 36 ~pt~vliHG~~-----~s~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a----~~--~~~~vg~~la~~i~~L~~~~g 104 (345)
-|++|++||-- .+.....+ .|...+|.|+.+|+++-. .|-.+ .. --..--+++-+.+++|.+...
T Consensus 394 yP~i~~~hGGP~~~~~~~~~~~~q-~~~~~G~~V~~~n~RGS~---GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~ 469 (620)
T COG1506 394 YPLIVYIHGGPSAQVGYSFNPEIQ-VLASAGYAVLAPNYRGST---GYGREFADAIRGDWGGVDLEDLIAAVDALVKLPL 469 (620)
T ss_pred CCEEEEeCCCCccccccccchhhH-HHhcCCeEEEEeCCCCCC---ccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCC
Confidence 38899999851 11222223 455679999999999742 33221 10 000122466666777777656
Q ss_pred CCCCCEEEEEecHHHHHHHHHHHHc
Q psy2108 105 DVEPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 105 ~~~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
++.+++++.|||-||-++..+....
T Consensus 470 ~d~~ri~i~G~SyGGymtl~~~~~~ 494 (620)
T COG1506 470 VDPERIGITGGSYGGYMTLLAATKT 494 (620)
T ss_pred cChHHeEEeccChHHHHHHHHHhcC
Confidence 7888999999999999999888764
No 132
>KOG4667|consensus
Probab=96.76 E-value=0.0088 Score=55.68 Aligned_cols=92 Identities=12% Similarity=0.091 Sum_probs=66.0
Q ss_pred ccCCCccEEEEcCCCCC-----hHHHHHHHhhcCCeEEEEEcCCCCcCCC--CccccccCHHHHHHHHHHHHHHHHhhcC
Q psy2108 32 IRQKTFTNVIYHLMSIS-----IFFISTEYFKRGDYNVWFVNWPELCRGP--CYVISVYNLEQVGKCVAQMIKRLSKYIG 104 (345)
Q Consensus 32 ~~~~~pt~vliHG~~~s-----~~~l~~a~L~~~~~NVI~vDw~~~~~s~--~Y~~a~~~~~~vg~~la~~i~~L~~~~g 104 (345)
.-..+..+|++||+.+. ...++. .+++.++-++-+|+++.|.|. .|+ .+.+.-+++|...++.+.+.
T Consensus 29 ~tgs~e~vvlcHGfrS~Kn~~~~~~vA~-~~e~~gis~fRfDF~GnGeS~gsf~~---Gn~~~eadDL~sV~q~~s~~-- 102 (269)
T KOG4667|consen 29 ETGSTEIVVLCHGFRSHKNAIIMKNVAK-ALEKEGISAFRFDFSGNGESEGSFYY---GNYNTEADDLHSVIQYFSNS-- 102 (269)
T ss_pred ccCCceEEEEeeccccccchHHHHHHHH-HHHhcCceEEEEEecCCCCcCCcccc---CcccchHHHHHHHHHHhccC--
Confidence 34466789999999654 233333 466789999999999998873 333 33444568999999988653
Q ss_pred CCCCCEEEEEecHHHHHHHHHHHHcC
Q psy2108 105 DVEPDMHLIGFSLGAHVAAYTSKYLR 130 (345)
Q Consensus 105 ~~~~~vhLIGHSLGAhVAg~ag~~~~ 130 (345)
+.-=-.++|||=|+-|+...+..+.
T Consensus 103 -nr~v~vi~gHSkGg~Vvl~ya~K~~ 127 (269)
T KOG4667|consen 103 -NRVVPVILGHSKGGDVVLLYASKYH 127 (269)
T ss_pred -ceEEEEEEeecCccHHHHHHHHhhc
Confidence 2333468999999999987776664
No 133
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=96.73 E-value=0.013 Score=56.98 Aligned_cols=104 Identities=12% Similarity=0.065 Sum_probs=63.3
Q ss_pred CCccEEEEcCCCC------ChHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcC--CC
Q psy2108 35 KTFTNVIYHLMSI------SIFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIG--DV 106 (345)
Q Consensus 35 ~~pt~vliHG~~~------s~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g--~~ 106 (345)
+.-.+|||-|.+. ....|++++ ...++.|+-+-++.--. .|- ......=+++|+++|++|+...+ .+
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL-~~~~wsl~q~~LsSSy~--G~G--~~SL~~D~~eI~~~v~ylr~~~~g~~~ 106 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEAL-EETGWSLFQVQLSSSYS--GWG--TSSLDRDVEEIAQLVEYLRSEKGGHFG 106 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHH-T-TT-EEEEE--GGGBT--TS---S--HHHHHHHHHHHHHHHHHHS-----
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHh-ccCCeEEEEEEecCccC--CcC--cchhhhHHHHHHHHHHHHHHhhccccC
Confidence 4557999999864 267788764 55689999999875211 121 22334445789999999987632 36
Q ss_pred CCCEEEEEecHHHHHHHHHHHHcCC----CCCCeeeccCCC
Q psy2108 107 EPDMHLIGFSLGAHVAAYTSKYLRP----YKLPRITGLDPA 143 (345)
Q Consensus 107 ~~~vhLIGHSLGAhVAg~ag~~~~~----~~v~rItgLDPA 143 (345)
.++|.|+|||-|.|-+..+...... .+|.+++.-.|.
T Consensus 107 ~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApV 147 (303)
T PF08538_consen 107 REKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPV 147 (303)
T ss_dssp -S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE-
T ss_pred CccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCC
Confidence 8999999999999999988776532 457777766554
No 134
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.71 E-value=0.0062 Score=62.57 Aligned_cols=67 Identities=19% Similarity=0.196 Sum_probs=48.3
Q ss_pred CeEEEEEcCC-CCcCCCCccc---cccCHHHHHHHHHHHHHHHHhhc-CCCCCCEEEEEecHHHHHHHHHHHHc
Q psy2108 61 DYNVWFVNWP-ELCRGPCYVI---SVYNLEQVGKCVAQMIKRLSKYI-GDVEPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 61 ~~NVI~vDw~-~~~~s~~Y~~---a~~~~~~vg~~la~~i~~L~~~~-g~~~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
..|||.+|.+ +.|.| |.. ...+...+++++.++|+.+.+.+ .+...+++|+|||+|||.+-.++.++
T Consensus 121 ~~~~l~iDqP~G~G~S--~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i 192 (462)
T PTZ00472 121 EAYVIYVDQPAGVGFS--YADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRI 192 (462)
T ss_pred ccCeEEEeCCCCcCcc--cCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHH
Confidence 4899999987 44443 221 23455788999999988665432 33458999999999999997777665
No 135
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.69 E-value=0.017 Score=52.77 Aligned_cols=106 Identities=16% Similarity=0.111 Sum_probs=68.5
Q ss_pred cCCCccEEEEcCC---CC--C---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcC
Q psy2108 33 RQKTFTNVIYHLM---SI--S---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIG 104 (345)
Q Consensus 33 ~~~~pt~vliHG~---~~--s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g 104 (345)
.+.+|..|++|-. +. . ...+..+ |.+.|+.++-.|+++.|+|..-.. .-+..+ ++.+..++||++..-
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~-l~~~G~atlRfNfRgVG~S~G~fD--~GiGE~-~Da~aaldW~~~~hp 100 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARA-LVKRGFATLRFNFRGVGRSQGEFD--NGIGEL-EDAAAALDWLQARHP 100 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHH-HHhCCceEEeecccccccccCccc--CCcchH-HHHHHHHHHHHhhCC
Confidence 3566788889853 11 2 3444444 456799999999999888742111 112222 466777899986521
Q ss_pred CCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 105 DVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 105 ~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
......|.|+|.||.||+.++.+.+ +...-|..+-|.+
T Consensus 101 -~s~~~~l~GfSFGa~Ia~~la~r~~-e~~~~is~~p~~~ 138 (210)
T COG2945 101 -DSASCWLAGFSFGAYIAMQLAMRRP-EILVFISILPPIN 138 (210)
T ss_pred -CchhhhhcccchHHHHHHHHHHhcc-cccceeeccCCCC
Confidence 2233578999999999999998875 4444555555544
No 136
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.64 E-value=0.0099 Score=57.95 Aligned_cols=96 Identities=13% Similarity=0.059 Sum_probs=54.5
Q ss_pred CccEEEEcCCCCC-----hHHHHHHHhhcCCeEEEEEcCCCCcCCCCcc-ccccCHHHHHHHHHHHHHHHHhhcCCCCCC
Q psy2108 36 TFTNVIYHLMSIS-----IFFISTEYFKRGDYNVWFVNWPELCRGPCYV-ISVYNLEQVGKCVAQMIKRLSKYIGDVEPD 109 (345)
Q Consensus 36 ~pt~vliHG~~~s-----~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~-~a~~~~~~vg~~la~~i~~L~~~~g~~~~~ 109 (345)
..|+|+-||++.+ ...+++..-...|.-|.++-......+ .|. .....+..|.+.|++ +..| .+-
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~ig~~~~~-s~~~~~~~Qve~vce~l~~-~~~l-------~~G 95 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEIGNGVGD-SWLMPLTQQAEIACEKVKQ-MKEL-------SQG 95 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEECCCccc-cceeCHHHHHHHHHHHHhh-chhh-------hCc
Confidence 3579999999753 333444332234555555544433222 232 122233344444444 3333 235
Q ss_pred EEEEEecHHHHHHHHHHHHcCC-CCCCeeecc
Q psy2108 110 MHLIGFSLGAHVAAYTSKYLRP-YKLPRITGL 140 (345)
Q Consensus 110 vhLIGHSLGAhVAg~ag~~~~~-~~v~rItgL 140 (345)
+|+||||-||.++-.+..+.+. .+|..++-|
T Consensus 96 ~naIGfSQGGlflRa~ierc~~~p~V~nlISl 127 (314)
T PLN02633 96 YNIVGRSQGNLVARGLIEFCDGGPPVYNYISL 127 (314)
T ss_pred EEEEEEccchHHHHHHHHHCCCCCCcceEEEe
Confidence 9999999999999888887763 356666654
No 137
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=96.62 E-value=0.0031 Score=64.59 Aligned_cols=107 Identities=21% Similarity=0.081 Sum_probs=65.7
Q ss_pred CCccEEEEcCCC----CC---hHHHHHHHhhcCCeEEEEEcCCCCcCCC----Ccc--cc-ccCHHHHHHHHHHHHHHHH
Q psy2108 35 KTFTNVIYHLMS----IS---IFFISTEYFKRGDYNVWFVNWPELCRGP----CYV--IS-VYNLEQVGKCVAQMIKRLS 100 (345)
Q Consensus 35 ~~pt~vliHG~~----~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~----~Y~--~a-~~~~~~vg~~la~~i~~L~ 100 (345)
+.|++|+|||-+ +. ..+-. .+-+++++=|+.|+++-.+..- .+. .+ ..|. .+-+++ ..|+|++
T Consensus 93 ~~PVmV~IHGG~y~~Gs~s~~~ydgs-~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~-Gl~Dqi-lALkWV~ 169 (491)
T COG2272 93 KLPVMVYIHGGGYIMGSGSEPLYDGS-ALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNL-GLLDQI-LALKWVR 169 (491)
T ss_pred CCcEEEEEeccccccCCCcccccChH-HHHhcCCEEEEEeCcccccceeeehhhccccccccccc-cHHHHH-HHHHHHH
Confidence 559999999832 21 12221 2334455889999998654321 111 11 1121 122333 3477776
Q ss_pred h---hcCCCCCCEEEEEecHHHHHHHHHHHHcC--CCCCCeeeccCCCCC
Q psy2108 101 K---YIGDVEPDMHLIGFSLGAHVAAYTSKYLR--PYKLPRITGLDPAMP 145 (345)
Q Consensus 101 ~---~~g~~~~~vhLIGHSLGAhVAg~ag~~~~--~~~v~rItgLDPAgP 145 (345)
+ .+|-+++||.|+|+|.||+.+...-+. + ++-..|.+.+.|+.+
T Consensus 170 ~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 170 DNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 4 468899999999999999988655442 3 256778888887765
No 138
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.52 E-value=0.005 Score=57.45 Aligned_cols=49 Identities=16% Similarity=0.306 Sum_probs=36.7
Q ss_pred HHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcC---CCCCCeeeccCCCC
Q psy2108 93 AQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLR---PYKLPRITGLDPAM 144 (345)
Q Consensus 93 a~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~---~~~v~rItgLDPAg 144 (345)
.++++.+.+. -.+++.+.|||+||.+|-+++..+. ..+|.++...|..|
T Consensus 72 ~~yl~~~~~~---~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 72 LAYLKKIAKK---YPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHh---CCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 4455555443 2346999999999999999998854 25889999999744
No 139
>PLN02606 palmitoyl-protein thioesterase
Probab=96.51 E-value=0.015 Score=56.68 Aligned_cols=96 Identities=13% Similarity=0.091 Sum_probs=51.4
Q ss_pred CCccEEEEcCCCCC-----hHHHHHHHhh-cCCeEEEEEcCCCCcCCCCc-cccccCHHHHHHHHHHHHHHHHhhcCCCC
Q psy2108 35 KTFTNVIYHLMSIS-----IFFISTEYFK-RGDYNVWFVNWPELCRGPCY-VISVYNLEQVGKCVAQMIKRLSKYIGDVE 107 (345)
Q Consensus 35 ~~pt~vliHG~~~s-----~~~l~~a~L~-~~~~NVI~vDw~~~~~s~~Y-~~a~~~~~~vg~~la~~i~~L~~~~g~~~ 107 (345)
+..|+|+.||++.+ ...+++ ++. ..++-+..|-....-.+ .+ -.....+..|.+.|+. +..| .
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~-~i~~~~~~pg~~v~ig~~~~~-s~~~~~~~Qv~~vce~l~~-~~~L-------~ 94 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQ-FLINHSGYPGTCVEIGNGVQD-SLFMPLRQQASIACEKIKQ-MKEL-------S 94 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHH-HHHhCCCCCeEEEEECCCccc-ccccCHHHHHHHHHHHHhc-chhh-------c
Confidence 45689999999732 344444 333 22433333322111111 12 2222333444444444 3333 2
Q ss_pred CCEEEEEecHHHHHHHHHHHHcCC-CCCCeeecc
Q psy2108 108 PDMHLIGFSLGAHVAAYTSKYLRP-YKLPRITGL 140 (345)
Q Consensus 108 ~~vhLIGHSLGAhVAg~ag~~~~~-~~v~rItgL 140 (345)
+-+|+||||-||+++-.+..+.+. ..|..++-|
T Consensus 95 ~G~naIGfSQGglflRa~ierc~~~p~V~nlISl 128 (306)
T PLN02606 95 EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSL 128 (306)
T ss_pred CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEe
Confidence 459999999999999888877753 345555544
No 140
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.51 E-value=0.0098 Score=59.70 Aligned_cols=83 Identities=16% Similarity=0.190 Sum_probs=56.1
Q ss_pred hHHHHHHHhh---cCCeEEEE--EcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHH
Q psy2108 49 IFFISTEYFK---RGDYNVWF--VNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAA 123 (345)
Q Consensus 49 ~~~l~~a~L~---~~~~NVI~--vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg 123 (345)
+..+.+.+.+ +.+.++++ .|||.-.. ........|.++|+.+.+. .-++|.||||||||.++-
T Consensus 67 ~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~---------~~~~~~~~lk~~ie~~~~~---~~~kv~li~HSmGgl~~~ 134 (389)
T PF02450_consen 67 FAKLIENLEKLGYDRGKDLFAAPYDWRLSPA---------ERDEYFTKLKQLIEEAYKK---NGKKVVLIAHSMGGLVAR 134 (389)
T ss_pred HHHHHHHHHhcCcccCCEEEEEeechhhchh---------hHHHHHHHHHHHHHHHHHh---cCCcEEEEEeCCCchHHH
Confidence 5666665433 13455555 49985322 1234456777777777554 357999999999999999
Q ss_pred HHHHHcCC-----CCCCeeeccCCC
Q psy2108 124 YTSKYLRP-----YKLPRITGLDPA 143 (345)
Q Consensus 124 ~ag~~~~~-----~~v~rItgLDPA 143 (345)
++-+.... +.|++++.|.+.
T Consensus 135 ~fl~~~~~~~W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 135 YFLQWMPQEEWKDKYIKRFISIGTP 159 (389)
T ss_pred HHHHhccchhhHHhhhhEEEEeCCC
Confidence 88877642 369999988764
No 141
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.47 E-value=0.014 Score=58.31 Aligned_cols=99 Identities=16% Similarity=0.164 Sum_probs=60.4
Q ss_pred CccEEEEcCCC----CC---hHHHHHHHhhcCCeEEEEEcCCCCc---CCCCccccccCHHHHHHHHHHHHHHHHhhcCC
Q psy2108 36 TFTNVIYHLMS----IS---IFFISTEYFKRGDYNVWFVNWPELC---RGPCYVISVYNLEQVGKCVAQMIKRLSKYIGD 105 (345)
Q Consensus 36 ~pt~vliHG~~----~s---~~~l~~a~L~~~~~NVI~vDw~~~~---~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~ 105 (345)
.|.+|.+||-+ .. ...+..-+-.-++..|+++|++--. ..-.||.. + .++.+..+.|.+..
T Consensus 122 DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~~~~~~~~yPtQ------L-~qlv~~Y~~Lv~~~-- 192 (374)
T PF10340_consen 122 DPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTSSDEHGHKYPTQ------L-RQLVATYDYLVESE-- 192 (374)
T ss_pred CcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccccccCCCcCchH------H-HHHHHHHHHHHhcc--
Confidence 48889999853 11 2222221111236799999998655 23245522 2 34445566676332
Q ss_pred CCCCEEEEEecHHHHHHHHHHHHcCC-CC---CCeeeccCCC
Q psy2108 106 VEPDMHLIGFSLGAHVAAYTSKYLRP-YK---LPRITGLDPA 143 (345)
Q Consensus 106 ~~~~vhLIGHSLGAhVAg~ag~~~~~-~~---v~rItgLDPA 143 (345)
+.+||+|+|-|.|||+|...-+++.. ++ -++++++.|.
T Consensus 193 G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPW 234 (374)
T PF10340_consen 193 GNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPW 234 (374)
T ss_pred CCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCC
Confidence 46899999999999999877777642 12 2456666664
No 142
>KOG2112|consensus
Probab=96.35 E-value=0.022 Score=52.42 Aligned_cols=107 Identities=18% Similarity=0.133 Sum_probs=70.3
Q ss_pred CccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCC--------CCc---------cccccCHHHHHHHHHHH
Q psy2108 36 TFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRG--------PCY---------VISVYNLEQVGKCVAQM 95 (345)
Q Consensus 36 ~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s--------~~Y---------~~a~~~~~~vg~~la~~ 95 (345)
+-++|++||.+++ +.++... |.-.+..-|++--+..--+ ..| +.........++.++.+
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~-l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQ-LPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHc-CCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 4589999998654 3333333 4446777777743321100 011 11223445566777777
Q ss_pred HHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCC
Q psy2108 96 IKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMP 145 (345)
Q Consensus 96 i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP 145 (345)
++...+. |.+.++|-+-|+|+||.+|.+++-.++ ..+..+.++-+-.|
T Consensus 82 i~~e~~~-Gi~~~rI~igGfs~G~a~aL~~~~~~~-~~l~G~~~~s~~~p 129 (206)
T KOG2112|consen 82 IDNEPAN-GIPSNRIGIGGFSQGGALALYSALTYP-KALGGIFALSGFLP 129 (206)
T ss_pred HHHHHHc-CCCccceeEcccCchHHHHHHHHhccc-cccceeeccccccc
Confidence 7766555 889999999999999999999998884 77777777665444
No 143
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=96.32 E-value=0.063 Score=52.41 Aligned_cols=108 Identities=15% Similarity=0.029 Sum_probs=71.9
Q ss_pred ccEEEEcCCCCC------hHHHHHHHhhcCCeEEEEEcCCCCcCC--CCcc---------------cc------------
Q psy2108 37 FTNVIYHLMSIS------IFFISTEYFKRGDYNVWFVNWPELCRG--PCYV---------------IS------------ 81 (345)
Q Consensus 37 pt~vliHG~~~s------~~~l~~a~L~~~~~NVI~vDw~~~~~s--~~Y~---------------~a------------ 81 (345)
-.+|+|||++.+ ...+++. |...|++.+++-.+..... +... ..
T Consensus 88 G~vIilp~~g~~~d~p~~i~~LR~~-L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 166 (310)
T PF12048_consen 88 GAVIILPDWGEHPDWPGLIAPLRRE-LPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEA 166 (310)
T ss_pred eEEEEecCCCCCCCcHhHHHHHHHH-hhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHh
Confidence 479999998743 4556664 4567999999888772110 0000 00
Q ss_pred ---ccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCCCCC
Q psy2108 82 ---VYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMPMFM 148 (345)
Q Consensus 82 ---~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP~F~ 148 (345)
..+...+-..|...+.++.+. +-.++.||||+.||..+..+-...+...+..++.++|-.|.-.
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~~---~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~ 233 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQQ---GGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQPD 233 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcch
Confidence 011234556677777777665 4577999999999999876665544456899999999766543
No 144
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=96.29 E-value=0.036 Score=52.66 Aligned_cols=104 Identities=13% Similarity=0.071 Sum_probs=65.4
Q ss_pred CccEEEEcCCCCC---hHHHHHHHhhcC----CeEEEEEcCCCCcC-------CCCccc-------cccCHHHHHHHHHH
Q psy2108 36 TFTNVIYHLMSIS---IFFISTEYFKRG----DYNVWFVNWPELCR-------GPCYVI-------SVYNLEQVGKCVAQ 94 (345)
Q Consensus 36 ~pt~vliHG~~~s---~~~l~~a~L~~~----~~NVI~vDw~~~~~-------s~~Y~~-------a~~~~~~vg~~la~ 94 (345)
.-|.|+|||.+.. ...|.+.++... +.=++.||=-+--. ...||. -..+.....+.+-.
T Consensus 45 ~iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 45 AIPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred ccceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 4578999998753 445555555432 23466666544110 012331 12233455778888
Q ss_pred HHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCC----CCCCeeeccC
Q psy2108 95 MIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRP----YKLPRITGLD 141 (345)
Q Consensus 95 ~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~----~~v~rItgLD 141 (345)
.+..|.+++ +.+++.+|||||||--.-++...+.. -.|.+++.|+
T Consensus 125 ~msyL~~~Y--~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~ 173 (288)
T COG4814 125 AMSYLQKHY--NIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLA 173 (288)
T ss_pred HHHHHHHhc--CCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEec
Confidence 888998864 67899999999999887766655542 2577777775
No 145
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.24 E-value=0.011 Score=49.55 Aligned_cols=40 Identities=20% Similarity=0.262 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcC
Q psy2108 89 GKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLR 130 (345)
Q Consensus 89 g~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~ 130 (345)
.+.+.+-|..+.+.. +..+|.+.||||||.+|..++..+.
T Consensus 47 ~~~~~~~l~~~~~~~--~~~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 47 YDQILDALKELVEKY--PDYSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc--cCccchhhccchHHHHHHHHHHhhh
Confidence 344445455554442 3578999999999999999888764
No 146
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.20 E-value=0.0048 Score=57.94 Aligned_cols=90 Identities=8% Similarity=0.019 Sum_probs=57.2
Q ss_pred CCccEEEEcCCCC----ChHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccc---cCHH-HHHHHHHHHHHHHHhhcCCC
Q psy2108 35 KTFTNVIYHLMSI----SIFFISTEYFKRGDYNVWFVNWPELCRGPCYVISV---YNLE-QVGKCVAQMIKRLSKYIGDV 106 (345)
Q Consensus 35 ~~pt~vliHG~~~----s~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~---~~~~-~vg~~la~~i~~L~~~~g~~ 106 (345)
+.+-.+++-|-.. ..+.++. .+.+.++.|+..|+++.++|. -.... .... ---.+++..|.++.+. .+
T Consensus 28 ~~~g~~~va~a~Gv~~~fYRrfA~-~a~~~Gf~Vlt~dyRG~g~S~-p~~~~~~~~~~~DwA~~D~~aal~~~~~~--~~ 103 (281)
T COG4757 28 KASGRLVVAGATGVGQYFYRRFAA-AAAKAGFEVLTFDYRGIGQSR-PASLSGSQWRYLDWARLDFPAALAALKKA--LP 103 (281)
T ss_pred CCCCcEEecccCCcchhHhHHHHH-HhhccCceEEEEecccccCCC-ccccccCccchhhhhhcchHHHHHHHHhh--CC
Confidence 3344566654322 2444544 456789999999999998873 11111 1112 2234666667777653 13
Q ss_pred CCCEEEEEecHHHHHHHHHHHH
Q psy2108 107 EPDMHLIGFSLGAHVAAYTSKY 128 (345)
Q Consensus 107 ~~~vhLIGHSLGAhVAg~ag~~ 128 (345)
--..+.||||+|||+.|.++++
T Consensus 104 ~~P~y~vgHS~GGqa~gL~~~~ 125 (281)
T COG4757 104 GHPLYFVGHSFGGQALGLLGQH 125 (281)
T ss_pred CCceEEeeccccceeecccccC
Confidence 4578999999999999999875
No 147
>PRK10115 protease 2; Provisional
Probab=96.20 E-value=0.03 Score=60.29 Aligned_cols=106 Identities=9% Similarity=-0.146 Sum_probs=69.4
Q ss_pred CCccEEEEcCC-CC----ChHHHHHHHhhcCCeEEEEEcCCCCcCC-CCccccccCHH--HHHHHHHHHHHHHHhhcCCC
Q psy2108 35 KTFTNVIYHLM-SI----SIFFISTEYFKRGDYNVWFVNWPELCRG-PCYVISVYNLE--QVGKCVAQMIKRLSKYIGDV 106 (345)
Q Consensus 35 ~~pt~vliHG~-~~----s~~~l~~a~L~~~~~NVI~vDw~~~~~s-~~Y~~a~~~~~--~vg~~la~~i~~L~~~~g~~ 106 (345)
+.|++|.+||- .. .+......+++ .|+-|+.++.+|.+.. ..+..+..... ..-+++...+++|.++.-.+
T Consensus 444 ~~P~ll~~hGg~~~~~~p~f~~~~~~l~~-rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d 522 (686)
T PRK10115 444 HNPLLVYGYGSYGASIDADFSFSRLSLLD-RGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGS 522 (686)
T ss_pred CCCEEEEEECCCCCCCCCCccHHHHHHHH-CCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCC
Confidence 45899999983 22 24444555665 5899999999986532 11111110000 12246666778887764468
Q ss_pred CCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCC
Q psy2108 107 EPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDP 142 (345)
Q Consensus 107 ~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDP 142 (345)
.+++-+.|-|-||.+++.+..+.+ ++.+-++.--|
T Consensus 523 ~~rl~i~G~S~GG~l~~~~~~~~P-dlf~A~v~~vp 557 (686)
T PRK10115 523 PSLCYGMGGSAGGMLMGVAINQRP-ELFHGVIAQVP 557 (686)
T ss_pred hHHeEEEEECHHHHHHHHHHhcCh-hheeEEEecCC
Confidence 999999999999999998887654 66666664433
No 148
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=96.06 E-value=0.014 Score=56.29 Aligned_cols=101 Identities=18% Similarity=0.090 Sum_probs=48.5
Q ss_pred CCccEEEEcCCCCC------hHHHHHHHhh--cCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCC
Q psy2108 35 KTFTNVIYHLMSIS------IFFISTEYFK--RGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDV 106 (345)
Q Consensus 35 ~~pt~vliHG~~~s------~~~l~~a~L~--~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~ 106 (345)
...|+|+.||++.+ ...++. +++ .+|.-|..|+........ .. ..-...+-+++..+.+.|.+...+
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~-~i~~~~PG~yV~si~ig~~~~~D--~~-~s~f~~v~~Qv~~vc~~l~~~p~L- 78 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKE-LIEEQHPGTYVHSIEIGNDPSED--VE-NSFFGNVNDQVEQVCEQLANDPEL- 78 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHH-HHHHHSTT--EEE--SSSSHHHH--HH-HHHHSHHHHHHHHHHHHHHH-GGG-
T ss_pred CCCcEEEEEcCccccCChhHHHHHHH-HHHHhCCCceEEEEEECCCcchh--hh-hhHHHHHHHHHHHHHHHHhhChhh-
Confidence 44579999999743 233332 221 367889999886532110 00 000122334444444444432111
Q ss_pred CCCEEEEEecHHHHHHHHHHHHcCCCCCCeeecc
Q psy2108 107 EPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGL 140 (345)
Q Consensus 107 ~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgL 140 (345)
.+-+|+||||-||.++-.+..+.+...|..++.|
T Consensus 79 ~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISl 112 (279)
T PF02089_consen 79 ANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISL 112 (279)
T ss_dssp TT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEE
T ss_pred hcceeeeeeccccHHHHHHHHHCCCCCceeEEEe
Confidence 2569999999999999888888764466666554
No 149
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=96.06 E-value=0.035 Score=49.96 Aligned_cols=92 Identities=14% Similarity=0.034 Sum_probs=55.3
Q ss_pred CccEEEEcCCCCC-hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEE
Q psy2108 36 TFTNVIYHLMSIS-IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIG 114 (345)
Q Consensus 36 ~pt~vliHG~~~s-~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIG 114 (345)
...+|+|||+..| -..+...+.++ .-|+-.|+.. .+ ..+...+.++++-+.+.. -.+.+.||+
T Consensus 2 ~~~~lIVpG~~~Sg~~HWq~~we~~-l~~a~rveq~-------~w----~~P~~~dWi~~l~~~v~a----~~~~~vlVA 65 (181)
T COG3545 2 MTDVLIVPGYGGSGPNHWQSRWESA-LPNARRVEQD-------DW----EAPVLDDWIARLEKEVNA----AEGPVVLVA 65 (181)
T ss_pred CceEEEecCCCCCChhHHHHHHHhh-CccchhcccC-------CC----CCCCHHHHHHHHHHHHhc----cCCCeEEEE
Confidence 4568999999755 22222333322 2332111111 11 123345666665555533 244599999
Q ss_pred ecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 115 FSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 115 HSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
||||.-.+.-+..+.. .+|..+..+-|+.
T Consensus 66 HSLGc~~v~h~~~~~~-~~V~GalLVAppd 94 (181)
T COG3545 66 HSLGCATVAHWAEHIQ-RQVAGALLVAPPD 94 (181)
T ss_pred ecccHHHHHHHHHhhh-hccceEEEecCCC
Confidence 9999999998888775 5888888877764
No 150
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.05 E-value=0.012 Score=60.05 Aligned_cols=105 Identities=15% Similarity=-0.061 Sum_probs=61.6
Q ss_pred CCccEEEEcCCC----CC---hHHHHHHHhhcCCeEEEEEcCCCCcCC---CCccccc-cCHHHHHHHHHHHHHHHHhh-
Q psy2108 35 KTFTNVIYHLMS----IS---IFFISTEYFKRGDYNVWFVNWPELCRG---PCYVISV-YNLEQVGKCVAQMIKRLSKY- 102 (345)
Q Consensus 35 ~~pt~vliHG~~----~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s---~~Y~~a~-~~~~~vg~~la~~i~~L~~~- 102 (345)
+.|++|+|||-+ +. ...- ..++..++.=|+.+.||-..-. ....... .|.-. .|....|+|++++
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~-~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl--~Dq~~AL~WV~~nI 200 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDG-ASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGL--LDQRLALKWVQDNI 200 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHT-HHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHH--HHHHHHHHHHHHHG
T ss_pred ccceEEEeecccccCCCcccccccc-cccccCCCEEEEEecccccccccccccccccCchhhhh--hhhHHHHHHHHhhh
Confidence 579999999832 22 1221 2244556888999999864311 0011111 45443 2444558888754
Q ss_pred --cCCCCCCEEEEEecHHHHHHHHHHHHc-CCCCCCeeeccCC
Q psy2108 103 --IGDVEPDMHLIGFSLGAHVAAYTSKYL-RPYKLPRITGLDP 142 (345)
Q Consensus 103 --~g~~~~~vhLIGHSLGAhVAg~ag~~~-~~~~v~rItgLDP 142 (345)
+|-++++|+|.|||.||..++.....- ..+.+.|.+....
T Consensus 201 ~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 201 AAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred hhcccCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 677999999999999999998766541 1367888887776
No 151
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=95.97 E-value=0.084 Score=47.60 Aligned_cols=83 Identities=12% Similarity=0.101 Sum_probs=59.6
Q ss_pred CeEEEEEcCCCCcCCC--Ccccc--ccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCe
Q psy2108 61 DYNVWFVNWPELCRGP--CYVIS--VYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPR 136 (345)
Q Consensus 61 ~~NVI~vDw~~~~~s~--~Y~~a--~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~r 136 (345)
+-+|-+|-|.+.- .| ....+ ....+.-+..|+.|++-|.... -+...+++||||.|.-++|.+.+.. +..+..
T Consensus 60 ~~~vAvV~WlgYd-aP~~~~~~a~~~~~A~~ga~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~-~~~vdd 136 (177)
T PF06259_consen 60 GGSVAVVAWLGYD-APAGGLPDAASPGYARAGAPRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQG-GLRVDD 136 (177)
T ss_pred CCCeEEEEEcCCC-CCCCccccccCchHHHHHHHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhC-CCCccc
Confidence 3467777786541 12 11111 1234667889999999997654 3567999999999999999999873 478999
Q ss_pred eeccCCCCCC
Q psy2108 137 ITGLDPAMPM 146 (345)
Q Consensus 137 ItgLDPAgP~ 146 (345)
++.+-..|..
T Consensus 137 vv~~GSPG~g 146 (177)
T PF06259_consen 137 VVLVGSPGMG 146 (177)
T ss_pred EEEECCCCCC
Confidence 9988876654
No 152
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=95.87 E-value=0.018 Score=53.01 Aligned_cols=58 Identities=17% Similarity=0.280 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCCCCCC
Q psy2108 90 KCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMPMFMS 149 (345)
Q Consensus 90 ~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP~F~~ 149 (345)
++..+.++||.+...++.++|-|+|.|.||-+|..+|.+++ .|+.++.+.|+.-.|..
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~--~i~avVa~~ps~~~~~~ 61 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP--QISAVVAISPSSVVFQG 61 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS--SEEEEEEES--SB--SS
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC--CccEEEEeCCceeEecc
Confidence 35567789998876777899999999999999999999985 99999999999888864
No 153
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=95.74 E-value=0.016 Score=58.25 Aligned_cols=83 Identities=22% Similarity=0.209 Sum_probs=62.8
Q ss_pred EEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEe
Q psy2108 39 NVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGF 115 (345)
Q Consensus 39 ~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGH 115 (345)
-||+.|-+.| -.++.. .|++.|+.||-||=. .|......-..++.+++++|++-...+| ..++.|||+
T Consensus 263 av~~SGDGGWr~lDk~v~~-~l~~~gvpVvGvdsL------RYfW~~rtPe~~a~Dl~r~i~~y~~~w~--~~~~~liGy 333 (456)
T COG3946 263 AVFYSGDGGWRDLDKEVAE-ALQKQGVPVVGVDSL------RYFWSERTPEQIAADLSRLIRFYARRWG--AKRVLLIGY 333 (456)
T ss_pred EEEEecCCchhhhhHHHHH-HHHHCCCceeeeehh------hhhhccCCHHHHHHHHHHHHHHHHHhhC--cceEEEEee
Confidence 4455554443 344444 466789999999953 3555566668899999999999877654 689999999
Q ss_pred cHHHHHHHHHHHHcC
Q psy2108 116 SLGAHVAAYTSKYLR 130 (345)
Q Consensus 116 SLGAhVAg~ag~~~~ 130 (345)
|.||-|-=++-++++
T Consensus 334 SfGADvlP~~~n~L~ 348 (456)
T COG3946 334 SFGADVLPFAYNRLP 348 (456)
T ss_pred cccchhhHHHHHhCC
Confidence 999999988888886
No 154
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.67 E-value=0.027 Score=54.06 Aligned_cols=132 Identities=14% Similarity=0.002 Sum_probs=84.3
Q ss_pred eEEEEEEEEEeecccccccccccchhccCCCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCC----CCc
Q psy2108 6 VYCFTVSLTLNFRLRRFYAIVTEEILIRQKTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRG----PCY 78 (345)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s----~~Y 78 (345)
|-|+++.+.=+.-.++ .+-+--.+.-+.+.|.+|-.||.+.. +.++.. ....+|-|+++|-+|.+.+ ..+
T Consensus 54 ve~ydvTf~g~~g~rI-~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~--wa~~Gyavf~MdvRGQg~~~~dt~~~ 130 (321)
T COG3458 54 VEVYDVTFTGYGGARI-KGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLH--WAVAGYAVFVMDVRGQGSSSQDTADP 130 (321)
T ss_pred eEEEEEEEeccCCceE-EEEEEeecccCCccceEEEEeeccCCCCCcccccc--ccccceeEEEEecccCCCccccCCCC
Confidence 6688877765443332 22222112223466889999998643 334432 3456899999999998765 233
Q ss_pred cccc----------------cCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCC
Q psy2108 79 VISV----------------YNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDP 142 (345)
Q Consensus 79 ~~a~----------------~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDP 142 (345)
+... ...+.|=.++.+.++.|.....++.++|-+-|-|.||.||..++..- .||++....=|
T Consensus 131 p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~--~rik~~~~~~P 208 (321)
T COG3458 131 PGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALD--PRIKAVVADYP 208 (321)
T ss_pred CCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcC--hhhhccccccc
Confidence 3220 01233455777777777665567889999999999999999888642 46766665444
No 155
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=95.65 E-value=0.042 Score=52.99 Aligned_cols=88 Identities=16% Similarity=0.265 Sum_probs=56.2
Q ss_pred HHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhh---cCCCC-CCEEEEEecHHHHHHHHHHH
Q psy2108 52 ISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKY---IGDVE-PDMHLIGFSLGAHVAAYTSK 127 (345)
Q Consensus 52 l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~---~g~~~-~~vhLIGHSLGAhVAg~ag~ 127 (345)
+...+|+ .||.|++.||.|.+. .|... +.-|..+-+.|...++. .|++. .++-|.|||-||+-++.++.
T Consensus 18 ~l~~~L~-~GyaVv~pDY~Glg~--~y~~~----~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~ 90 (290)
T PF03583_consen 18 FLAAWLA-RGYAVVAPDYEGLGT--PYLNG----RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAE 90 (290)
T ss_pred HHHHHHH-CCCEEEecCCCCCCC--cccCc----HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHH
Confidence 4456775 589999999999876 36543 33455555555544432 24433 58999999999999998875
Q ss_pred HcCC--CCCC-eeeccCCCCCC
Q psy2108 128 YLRP--YKLP-RITGLDPAMPM 146 (345)
Q Consensus 128 ~~~~--~~v~-rItgLDPAgP~ 146 (345)
.-+. ..+. +|.|.-..+|.
T Consensus 91 l~~~YApeL~~~l~Gaa~gg~~ 112 (290)
T PF03583_consen 91 LAPSYAPELNRDLVGAAAGGPP 112 (290)
T ss_pred HhHHhCcccccceeEEeccCCc
Confidence 4220 2333 46665555554
No 156
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.56 E-value=0.024 Score=52.09 Aligned_cols=39 Identities=26% Similarity=0.235 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcC
Q psy2108 90 KCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLR 130 (345)
Q Consensus 90 ~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~ 130 (345)
..+...+..+.+. .+-.++.+.||||||.+|..++..+.
T Consensus 112 ~~~~~~~~~~~~~--~p~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 112 NQVLPELKSALKQ--YPDYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred HHHHHHHHHHHhh--CCCceEEEEccCHHHHHHHHHHHHHH
Confidence 3444444444333 35678999999999999999888764
No 157
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=95.55 E-value=0.078 Score=52.79 Aligned_cols=91 Identities=11% Similarity=0.023 Sum_probs=56.6
Q ss_pred CCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCc--CC-CCccccccCH----HHHHHHHHHHHHHHHhh--
Q psy2108 35 KTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELC--RG-PCYVISVYNL----EQVGKCVAQMIKRLSKY-- 102 (345)
Q Consensus 35 ~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~--~s-~~Y~~a~~~~----~~vg~~la~~i~~L~~~-- 102 (345)
..|.+++-||.++. +..+++ .+...++-|.++|.++-- .. ..|....... ..--.++..+|++|.+.
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~-~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~ 148 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAE-HLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTA 148 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHH-HHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhc
Confidence 45778888999875 333333 455678999999998831 11 1121100001 11224666666666544
Q ss_pred ---c--CCCCCCEEEEEecHHHHHHHHHH
Q psy2108 103 ---I--GDVEPDMHLIGFSLGAHVAAYTS 126 (345)
Q Consensus 103 ---~--g~~~~~vhLIGHSLGAhVAg~ag 126 (345)
. .++..+|-++|||+||+-+.+.+
T Consensus 149 sP~l~~~ld~~~Vgv~GhS~GG~T~m~la 177 (365)
T COG4188 149 SPALAGRLDPQRVGVLGHSFGGYTAMELA 177 (365)
T ss_pred CcccccccCccceEEEecccccHHHHHhc
Confidence 1 25678999999999999998665
No 158
>KOG2565|consensus
Probab=95.46 E-value=0.09 Score=52.57 Aligned_cols=91 Identities=10% Similarity=0.066 Sum_probs=65.2
Q ss_pred ccEEEEcCCCCChHHHHHH--HhhcC---------CeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCC
Q psy2108 37 FTNVIYHLMSISIFFISTE--YFKRG---------DYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGD 105 (345)
Q Consensus 37 pt~vliHG~~~s~~~l~~a--~L~~~---------~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~ 105 (345)
.|++++|||-+++++.-+- +|... -++||++-.+|.+-|..-.....+.-.+|+.+++++-.|
T Consensus 153 ~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRL------ 226 (469)
T KOG2565|consen 153 KPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRL------ 226 (469)
T ss_pred cceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHh------
Confidence 4799999999886654331 23222 279999999999877432333445556666666665555
Q ss_pred CCCCEEEEEecHHHHHHHHHHHHcCCCCC
Q psy2108 106 VEPDMHLIGFSLGAHVAAYTSKYLRPYKL 134 (345)
Q Consensus 106 ~~~~vhLIGHSLGAhVAg~ag~~~~~~~v 134 (345)
+.++..+=|---|+-|+...+..++ +.|
T Consensus 227 g~nkffiqGgDwGSiI~snlasLyP-enV 254 (469)
T KOG2565|consen 227 GYNKFFIQGGDWGSIIGSNLASLYP-ENV 254 (469)
T ss_pred CcceeEeecCchHHHHHHHHHhhcc-hhh
Confidence 6899999999999999999998886 444
No 159
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.42 E-value=0.049 Score=48.87 Aligned_cols=63 Identities=19% Similarity=0.151 Sum_probs=35.6
Q ss_pred CeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHH
Q psy2108 61 DYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKY 128 (345)
Q Consensus 61 ~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~ 128 (345)
...|..|+|+.......|..+ +..=.+.+.+.|+...... +-.++.|+|||.||+|++.+...
T Consensus 39 ~~~~~~V~YpA~~~~~~y~~S---~~~G~~~~~~~i~~~~~~C--P~~kivl~GYSQGA~V~~~~~~~ 101 (179)
T PF01083_consen 39 SVAVQGVEYPASLGPNSYGDS---VAAGVANLVRLIEEYAARC--PNTKIVLAGYSQGAMVVGDALSG 101 (179)
T ss_dssp EEEEEE--S---SCGGSCHHH---HHHHHHHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHH
T ss_pred eeEEEecCCCCCCCccccccc---HHHHHHHHHHHHHHHHHhC--CCCCEEEEecccccHHHHHHHHh
Confidence 467777888864432123322 2222334444455444432 55689999999999999988766
No 160
>KOG2541|consensus
Probab=94.95 E-value=0.14 Score=49.17 Aligned_cols=101 Identities=11% Similarity=0.159 Sum_probs=61.9
Q ss_pred ccCCCccEEEEcCCCCC-----hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCC
Q psy2108 32 IRQKTFTNVIYHLMSIS-----IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDV 106 (345)
Q Consensus 32 ~~~~~pt~vliHG~~~s-----~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~ 106 (345)
.....-|+|++||++++ ...+.+.+-+-.+.-|.++|....... .+ ..+.. +++..+.+.+... .--
T Consensus 19 ~s~s~~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig~g~~~-s~---l~pl~---~Qv~~~ce~v~~m-~~l 90 (296)
T KOG2541|consen 19 VSPSPVPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIGDGIKD-SS---LMPLW---EQVDVACEKVKQM-PEL 90 (296)
T ss_pred cCcccCCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEecCCcch-hh---hccHH---HHHHHHHHHHhcc-hhc
Confidence 33443679999998642 455555444456889999998765222 11 12233 3333333433311 112
Q ss_pred CCCEEEEEecHHHHHHHHHHHHcCCCCCCeeecc
Q psy2108 107 EPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGL 140 (345)
Q Consensus 107 ~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgL 140 (345)
.+-+++||.|-||.+|-.+.....+..|...+-|
T Consensus 91 sqGynivg~SQGglv~Raliq~cd~ppV~n~ISL 124 (296)
T KOG2541|consen 91 SQGYNIVGYSQGGLVARALIQFCDNPPVKNFISL 124 (296)
T ss_pred cCceEEEEEccccHHHHHHHHhCCCCCcceeEec
Confidence 4569999999999999999888765566655544
No 161
>KOG2984|consensus
Probab=94.94 E-value=0.026 Score=52.15 Aligned_cols=101 Identities=10% Similarity=-0.045 Sum_probs=65.5
Q ss_pred cEEEEcCCC-CChHHHHHHHh---hcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEE
Q psy2108 38 TNVIYHLMS-ISIFFISTEYF---KRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLI 113 (345)
Q Consensus 38 t~vliHG~~-~s~~~l~~a~L---~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLI 113 (345)
-++++-|.. +.+.++...++ ..-.+.||+.|-++.|.| .-|+-..-+...-++.-..++.++. ++++++.++
T Consensus 44 ~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~S-rPP~Rkf~~~ff~~Da~~avdLM~a---Lk~~~fsvl 119 (277)
T KOG2984|consen 44 YILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTS-RPPERKFEVQFFMKDAEYAVDLMEA---LKLEPFSVL 119 (277)
T ss_pred eeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCC-CCCcccchHHHHHHhHHHHHHHHHH---hCCCCeeEe
Confidence 466778853 33444333322 222389999999999988 3444333444443443333333332 278999999
Q ss_pred EecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 114 GFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 114 GHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
|+|=||-.|..++.+.+ ++|.|++-...+
T Consensus 120 GWSdGgiTalivAak~~-e~v~rmiiwga~ 148 (277)
T KOG2984|consen 120 GWSDGGITALIVAAKGK-EKVNRMIIWGAA 148 (277)
T ss_pred eecCCCeEEEEeeccCh-hhhhhheeeccc
Confidence 99999999988887764 899998876554
No 162
>COG4099 Predicted peptidase [General function prediction only]
Probab=94.93 E-value=0.12 Score=50.34 Aligned_cols=96 Identities=9% Similarity=-0.111 Sum_probs=56.9
Q ss_pred ccEEEEcCCCCChHHHHHH---------HhhcC-CeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHH-HHHhhcCC
Q psy2108 37 FTNVIYHLMSISIFFISTE---------YFKRG-DYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIK-RLSKYIGD 105 (345)
Q Consensus 37 pt~vliHG~~~s~~~l~~a---------~L~~~-~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~-~L~~~~g~ 105 (345)
|-+||+||-+.-..+.... +...+ .+=|+++-|...-.. ...++...-..+-++|+ .|.+.+++
T Consensus 192 PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d-----~e~~t~~~l~~~idli~~vlas~ynI 266 (387)
T COG4099 192 PLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFAD-----SEEKTLLYLIEKIDLILEVLASTYNI 266 (387)
T ss_pred cEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccc-----cccccchhHHHHHHHHHHHHhhccCc
Confidence 7888999975432222111 11112 234666666552211 11222222233444454 66677889
Q ss_pred CCCCEEEEEecHHHHHHHHHHHHcCCCCCCeee
Q psy2108 106 VEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRIT 138 (345)
Q Consensus 106 ~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rIt 138 (345)
+-++|++||.|+||.-+.++...++ +....++
T Consensus 267 D~sRIYviGlSrG~~gt~al~~kfP-dfFAaa~ 298 (387)
T COG4099 267 DRSRIYVIGLSRGGFGTWALAEKFP-DFFAAAV 298 (387)
T ss_pred ccceEEEEeecCcchhhHHHHHhCc-hhhheee
Confidence 9999999999999999888887775 5544444
No 163
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=94.30 E-value=0.55 Score=44.97 Aligned_cols=41 Identities=17% Similarity=0.202 Sum_probs=34.3
Q ss_pred cCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 103 IGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 103 ~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
+..+.++-.|+||||||-++.++....+ ...++.....|+.
T Consensus 132 y~~~~~~~~i~GhSlGGLfvl~aLL~~p-~~F~~y~~~SPSl 172 (264)
T COG2819 132 YRTNSERTAIIGHSLGGLFVLFALLTYP-DCFGRYGLISPSL 172 (264)
T ss_pred cccCcccceeeeecchhHHHHHHHhcCc-chhceeeeecchh
Confidence 4567788999999999999999987654 7888888888873
No 164
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=94.30 E-value=0.3 Score=53.49 Aligned_cols=86 Identities=13% Similarity=0.010 Sum_probs=60.1
Q ss_pred HHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhc--------------CCCCCCEEEEEecHHHH
Q psy2108 55 EYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYI--------------GDVEPDMHLIGFSLGAH 120 (345)
Q Consensus 55 a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~--------------g~~~~~vhLIGHSLGAh 120 (345)
.|+...||+|+++|.+|.+.|....... . +.=.++....|+||.... ...-.+|-++|.|+||.
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~~~~-~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~ 350 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCPTTG-D-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGT 350 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcCccC-C-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHH
Confidence 3555679999999999998875443221 1 223467888899997321 11246999999999999
Q ss_pred HHHHHHHHcCCCCCCeeeccCCC
Q psy2108 121 VAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 121 VAg~ag~~~~~~~v~rItgLDPA 143 (345)
++-.++..- +..++.|+...+.
T Consensus 351 ~~~~aAa~~-pp~LkAIVp~a~i 372 (767)
T PRK05371 351 LPNAVATTG-VEGLETIIPEAAI 372 (767)
T ss_pred HHHHHHhhC-CCcceEEEeeCCC
Confidence 998777654 3577788765443
No 165
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=94.14 E-value=0.16 Score=46.33 Aligned_cols=106 Identities=17% Similarity=0.166 Sum_probs=47.1
Q ss_pred CCccEEEEcCCCCC-------hHHHHHHHhhcCCeEEEEEcCCCCcCC-------------------CCccc---c--cc
Q psy2108 35 KTFTNVIYHLMSIS-------IFFISTEYFKRGDYNVWFVNWPELCRG-------------------PCYVI---S--VY 83 (345)
Q Consensus 35 ~~pt~vliHG~~~s-------~~~l~~a~L~~~~~NVI~vDw~~~~~s-------------------~~Y~~---a--~~ 83 (345)
+++.++++||++.+ ...|+.+ |...++..+.+|=+-.... +.|.. . ..
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~-l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKA-LKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHH-HHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHH-HhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 46779999999876 3344443 3333689999986543310 11100 0 01
Q ss_pred CHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCC-------CCCCeeeccCCCCC
Q psy2108 84 NLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRP-------YKLPRITGLDPAMP 145 (345)
Q Consensus 84 ~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~-------~~v~rItgLDPAgP 145 (345)
....+-+.+..+.+.+.++ | + =.=|+|||.||-+|+.+...... ..++-++.+....|
T Consensus 82 ~~~~~~~sl~~l~~~i~~~-G--P-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p 146 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEEN-G--P-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPP 146 (212)
T ss_dssp GG---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----
T ss_pred cccCHHHHHHHHHHHHHhc-C--C-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCC
Confidence 1333445555666666554 2 1 35699999999999877754321 13455555555444
No 166
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=94.11 E-value=0.13 Score=50.03 Aligned_cols=113 Identities=10% Similarity=-0.070 Sum_probs=72.0
Q ss_pred ccchhccCCCccEEEEcCC----CCChHHHHHHHhhc---CCeEEEEEcCCCCcC-CCCccccccCHHHHHHHHHHHHHH
Q psy2108 27 TEEILIRQKTFTNVIYHLM----SISIFFISTEYFKR---GDYNVWFVNWPELCR-GPCYVISVYNLEQVGKCVAQMIKR 98 (345)
Q Consensus 27 ~~~~~~~~~~pt~vliHG~----~~s~~~l~~a~L~~---~~~NVI~vDw~~~~~-s~~Y~~a~~~~~~vg~~la~~i~~ 98 (345)
+.+-.-..+.|.+++.||- +.....+.++++.. ....+|.+|.-.-.. ...|.......+.+++.|- =+
T Consensus 89 ppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLl---P~ 165 (299)
T COG2382 89 PPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELL---PY 165 (299)
T ss_pred CCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhh---hh
Confidence 3333344577899999994 23345555666543 368999999865211 0123333344454555443 33
Q ss_pred HHhhcC--CCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 99 LSKYIG--DVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 99 L~~~~g--~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
+++.+. -..+.-.|+|-||||-+|.++|..++ ++.+++....|+
T Consensus 166 v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~P-e~FG~V~s~Sps 211 (299)
T COG2382 166 VEERYPTSADADGRVLAGDSLGGLVSLYAGLRHP-ERFGHVLSQSGS 211 (299)
T ss_pred hhccCcccccCCCcEEeccccccHHHHHHHhcCc-hhhceeeccCCc
Confidence 433322 13456789999999999999999885 899999988776
No 167
>PLN02408 phospholipase A1
Probab=94.00 E-value=0.097 Score=52.32 Aligned_cols=43 Identities=30% Similarity=0.423 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcC
Q psy2108 88 VGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLR 130 (345)
Q Consensus 88 vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~ 130 (345)
+-++|.+-|..|.+.+.-..-+|++.||||||.+|-.++..+.
T Consensus 180 ~r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~ 222 (365)
T PLN02408 180 LQEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIK 222 (365)
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHH
Confidence 4445545455555443322236999999999999999887764
No 168
>PLN02454 triacylglycerol lipase
Probab=94.00 E-value=0.12 Score=52.43 Aligned_cols=41 Identities=24% Similarity=0.276 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCC--CEEEEEecHHHHHHHHHHHHc
Q psy2108 87 QVGKCVAQMIKRLSKYIGDVEP--DMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 87 ~vg~~la~~i~~L~~~~g~~~~--~vhLIGHSLGAhVAg~ag~~~ 129 (345)
.+-++|-..|+.|.+.+ +-+ +|++.||||||.+|..++..+
T Consensus 207 S~r~qvl~~V~~l~~~Y--p~~~~sI~vTGHSLGGALAtLaA~di 249 (414)
T PLN02454 207 SARSQLLAKIKELLERY--KDEKLSIVLTGHSLGASLATLAAFDI 249 (414)
T ss_pred HHHHHHHHHHHHHHHhC--CCCCceEEEEecCHHHHHHHHHHHHH
Confidence 35556666666666543 233 499999999999999988654
No 169
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=93.58 E-value=0.5 Score=42.45 Aligned_cols=97 Identities=18% Similarity=0.135 Sum_probs=59.6
Q ss_pred ccEEEEcCCCCC-----hHHHHHHHhhcCCeEEEEEcCCCCcCCCC----cccccc-CHHHHHHHHHHHHHHHHhhcCCC
Q psy2108 37 FTNVIYHLMSIS-----IFFISTEYFKRGDYNVWFVNWPELCRGPC----YVISVY-NLEQVGKCVAQMIKRLSKYIGDV 106 (345)
Q Consensus 37 pt~vliHG~~~s-----~~~l~~a~L~~~~~NVI~vDw~~~~~s~~----Y~~a~~-~~~~vg~~la~~i~~L~~~~g~~ 106 (345)
-|+|+-||-+.+ ...+..+ |.+.++.|.-..++..++-.. -+.... --+..-..++++-..| .
T Consensus 15 ~tilLaHGAGasmdSt~m~~~a~~-la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l------~ 87 (213)
T COG3571 15 VTILLAHGAGASMDSTSMTAVAAA-LARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGL------A 87 (213)
T ss_pred EEEEEecCCCCCCCCHHHHHHHHH-HHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcc------c
Confidence 378889997543 4445554 456789999999877654310 011111 1122222334433322 3
Q ss_pred CCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccC
Q psy2108 107 EPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLD 141 (345)
Q Consensus 107 ~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLD 141 (345)
-..+.+-||||||-+|..++..+. -.|.-++.|.
T Consensus 88 ~gpLi~GGkSmGGR~aSmvade~~-A~i~~L~clg 121 (213)
T COG3571 88 EGPLIIGGKSMGGRVASMVADELQ-APIDGLVCLG 121 (213)
T ss_pred CCceeeccccccchHHHHHHHhhc-CCcceEEEec
Confidence 347999999999999999998775 4577777663
No 170
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=93.54 E-value=0.21 Score=46.58 Aligned_cols=81 Identities=26% Similarity=0.294 Sum_probs=50.0
Q ss_pred CCeEEEEEcCCCCcCCCCccc----cccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCC----
Q psy2108 60 GDYNVWFVNWPELCRGPCYVI----SVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRP---- 131 (345)
Q Consensus 60 ~~~NVI~vDw~~~~~s~~Y~~----a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~---- 131 (345)
.++++..|+|+.. .++. ....-..|++-++.+.+.+.+... .-+++.++|+|.||.||+.+.+++..
T Consensus 1 p~~~~~~V~YPa~----f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-~~~~vvV~GySQGA~Va~~~~~~l~~~~~~ 75 (225)
T PF08237_consen 1 PGYNVVAVDYPAS----FWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-AGGPVVVFGYSQGAVVASNVLRRLAADGDP 75 (225)
T ss_pred CCcceEEecCCch----hcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-CCCCEEEEEECHHHHHHHHHHHHHHhcCCC
Confidence 3688899999872 1111 011113345555566666654322 56789999999999999998887642
Q ss_pred --CCCCeeeccCCCCC
Q psy2108 132 --YKLPRITGLDPAMP 145 (345)
Q Consensus 132 --~~v~rItgLDPAgP 145 (345)
..+.=+..=||..|
T Consensus 76 ~~~~l~fVl~gnP~rp 91 (225)
T PF08237_consen 76 PPDDLSFVLIGNPRRP 91 (225)
T ss_pred CcCceEEEEecCCCCC
Confidence 23444445566555
No 171
>KOG3847|consensus
Probab=93.33 E-value=0.28 Score=48.21 Aligned_cols=108 Identities=20% Similarity=0.117 Sum_probs=63.3
Q ss_pred cCCCccEEEEcCCCCCh---HHHHHHHhhcCCeEEEEEcCCCCcCCCCccc----------------------c---ccC
Q psy2108 33 RQKTFTNVIYHLMSISI---FFISTEYFKRGDYNVWFVNWPELCRGPCYVI----------------------S---VYN 84 (345)
Q Consensus 33 ~~~~pt~vliHG~~~s~---~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~----------------------a---~~~ 84 (345)
.++.|.+||-||.+++- ..+--. |+..|+-|.+|..+.......|.. . ...
T Consensus 115 ~~k~PvvvFSHGLggsRt~YSa~c~~-LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~ir 193 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRTLYSAYCTS-LASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIR 193 (399)
T ss_pred CCCccEEEEecccccchhhHHHHhhh-HhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEee
Confidence 45668899999998762 222222 445689999998776543211110 0 001
Q ss_pred HHHHHHHHHH---HHHHHHhh---------------------cCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeecc
Q psy2108 85 LEQVGKCVAQ---MIKRLSKY---------------------IGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGL 140 (345)
Q Consensus 85 ~~~vg~~la~---~i~~L~~~---------------------~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgL 140 (345)
-+.|++.+.+ .++.|++. -.++.+++.+||||.||..+....... .+.+.-++|
T Consensus 194 Neqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~--t~FrcaI~l 271 (399)
T KOG3847|consen 194 NEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH--TDFRCAIAL 271 (399)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc--cceeeeeee
Confidence 1344443333 33333221 013456789999999999887776543 467788888
Q ss_pred CCC
Q psy2108 141 DPA 143 (345)
Q Consensus 141 DPA 143 (345)
|.-
T Consensus 272 D~W 274 (399)
T KOG3847|consen 272 DAW 274 (399)
T ss_pred eee
Confidence 864
No 172
>KOG1516|consensus
Probab=93.16 E-value=0.47 Score=49.19 Aligned_cols=89 Identities=20% Similarity=0.087 Sum_probs=51.6
Q ss_pred CccEEEEcCCC---CC---hHHHHHHH-hhcCCeEEEEEcCCCCcCC---CCccccccCHHHHHHHHHHHHHHHHh---h
Q psy2108 36 TFTNVIYHLMS---IS---IFFISTEY-FKRGDYNVWFVNWPELCRG---PCYVISVYNLEQVGKCVAQMIKRLSK---Y 102 (345)
Q Consensus 36 ~pt~vliHG~~---~s---~~~l~~a~-L~~~~~NVI~vDw~~~~~s---~~Y~~a~~~~~~vg~~la~~i~~L~~---~ 102 (345)
.|++|.|||-+ .+ .......+ +..++.=|+.+.++-..-. ..-..+..|.... +...-++|+++ .
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~--Dq~~AL~wv~~~I~~ 189 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLF--DQLLALRWVKDNIPS 189 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHH--HHHHHHHHHHHHHHh
Confidence 79999999842 12 22222333 3334555666666543111 0101112344333 44444777764 4
Q ss_pred cCCCCCCEEEEEecHHHHHHHHHH
Q psy2108 103 IGDVEPDMHLIGFSLGAHVAAYTS 126 (345)
Q Consensus 103 ~g~~~~~vhLIGHSLGAhVAg~ag 126 (345)
+|-++++|+|+|||.||..+.+..
T Consensus 190 FGGdp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 190 FGGDPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred cCCCCCeEEEEeechhHHHHHHHh
Confidence 677999999999999999997654
No 173
>COG3150 Predicted esterase [General function prediction only]
Probab=93.13 E-value=0.41 Score=43.08 Aligned_cols=90 Identities=13% Similarity=0.157 Sum_probs=50.0
Q ss_pred EEEEcCCCCChH----HHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEE
Q psy2108 39 NVIYHLMSISIF----FISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIG 114 (345)
Q Consensus 39 ~vliHG~~~s~~----~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIG 114 (345)
+|.|||+.+|.. .+...++. -.+-.+.++.... ++++ + ++++.++.+.... .-++.-|+|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~---~~~~~i~y~~p~l-~h~p------~----~a~~ele~~i~~~--~~~~p~ivG 65 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFID---EDVRDIEYSTPHL-PHDP------Q----QALKELEKAVQEL--GDESPLIVG 65 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHh---ccccceeeecCCC-CCCH------H----HHHHHHHHHHHHc--CCCCceEEe
Confidence 788999976622 22233432 2233333332211 1233 2 3333344443332 235599999
Q ss_pred ecHHHHHHHHHHHHcCCCCCCeeeccCCCCCCCC
Q psy2108 115 FSLGAHVAAYTSKYLRPYKLPRITGLDPAMPMFM 148 (345)
Q Consensus 115 HSLGAhVAg~ag~~~~~~~v~rItgLDPAgP~F~ 148 (345)
-||||.-|-..+.+.+ | |-+.++||---++
T Consensus 66 ssLGGY~At~l~~~~G---i-rav~~NPav~P~e 95 (191)
T COG3150 66 SSLGGYYATWLGFLCG---I-RAVVFNPAVRPYE 95 (191)
T ss_pred ecchHHHHHHHHHHhC---C-hhhhcCCCcCchh
Confidence 9999999999998764 2 3456788754443
No 174
>PLN02847 triacylglycerol lipase
Probab=93.12 E-value=0.59 Score=49.47 Aligned_cols=25 Identities=32% Similarity=0.480 Sum_probs=21.3
Q ss_pred CCCCEEEEEecHHHHHHHHHHHHcC
Q psy2108 106 VEPDMHLIGFSLGAHVAAYTSKYLR 130 (345)
Q Consensus 106 ~~~~vhLIGHSLGAhVAg~ag~~~~ 130 (345)
+-=++.++||||||.||..++..+.
T Consensus 249 PdYkLVITGHSLGGGVAALLAilLR 273 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYILR 273 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHHHh
Confidence 3348999999999999999988764
No 175
>KOG1553|consensus
Probab=92.90 E-value=0.26 Score=48.97 Aligned_cols=75 Identities=21% Similarity=0.317 Sum_probs=52.3
Q ss_pred CeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeecc
Q psy2108 61 DYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGL 140 (345)
Q Consensus 61 ~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgL 140 (345)
+|.|+..+.++++.|..-|-+. |..-..+.+ +++-.+..|+..++|.|.|+|.||.-+.+++..++ .|+.++ |
T Consensus 268 gYsvLGwNhPGFagSTG~P~p~-n~~nA~DaV---vQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YP--dVkavv-L 340 (517)
T KOG1553|consen 268 GYSVLGWNHPGFAGSTGLPYPV-NTLNAADAV---VQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYP--DVKAVV-L 340 (517)
T ss_pred CceeeccCCCCccccCCCCCcc-cchHHHHHH---HHHHHHHcCCCccceEEEEeecCCchHHHHhhcCC--CceEEE-e
Confidence 7999999999999885433332 222222333 33333444899999999999999999999998886 455544 4
Q ss_pred CC
Q psy2108 141 DP 142 (345)
Q Consensus 141 DP 142 (345)
|.
T Consensus 341 DA 342 (517)
T KOG1553|consen 341 DA 342 (517)
T ss_pred ec
Confidence 43
No 176
>KOG3101|consensus
Probab=92.83 E-value=0.12 Score=48.20 Aligned_cols=107 Identities=13% Similarity=0.067 Sum_probs=60.8
Q ss_pred CccEEEEcCCCCC--hHHHH---HHHhhcCCeEEEEEcCCCCcCCC--------------Ccccccc-----CHHHHHHH
Q psy2108 36 TFTNVIYHLMSIS--IFFIS---TEYFKRGDYNVWFVNWPELCRGP--------------CYVISVY-----NLEQVGKC 91 (345)
Q Consensus 36 ~pt~vliHG~~~s--~~~l~---~a~L~~~~~NVI~vDw~~~~~s~--------------~Y~~a~~-----~~~~vg~~ 91 (345)
-|++.++-|.... +.-.+ +...++.+.-|+.+|=+.-|-.. .|..|.. +.+...-.
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 4888899998643 11111 11233557888888866543210 1322211 22222223
Q ss_pred HHHHHHHHH-hhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 92 VAQMIKRLS-KYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 92 la~~i~~L~-~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
+-++.+.|. ....+++.++-+.|||||||=|...+-+- +.+-+.+.+..|.
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn-~~kykSvSAFAPI 175 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKN-PSKYKSVSAFAPI 175 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcC-cccccceeccccc
Confidence 344444443 23346677899999999999876554332 3677888877664
No 177
>PLN02324 triacylglycerol lipase
Probab=92.73 E-value=0.23 Score=50.44 Aligned_cols=42 Identities=26% Similarity=0.330 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHc
Q psy2108 88 VGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 88 vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
+-++|.+-|..|.+.+.-.--+|++.||||||.+|..++..+
T Consensus 195 areqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 195 AQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred HHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHH
Confidence 445555545555544221113699999999999999888654
No 178
>PLN02571 triacylglycerol lipase
Probab=92.63 E-value=0.24 Score=50.27 Aligned_cols=21 Identities=29% Similarity=0.477 Sum_probs=18.8
Q ss_pred CEEEEEecHHHHHHHHHHHHc
Q psy2108 109 DMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 109 ~vhLIGHSLGAhVAg~ag~~~ 129 (345)
+|++.||||||.+|..++..+
T Consensus 227 sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 227 SITICGHSLGAALATLNAVDI 247 (413)
T ss_pred cEEEeccchHHHHHHHHHHHH
Confidence 699999999999999888764
No 179
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=92.48 E-value=0.18 Score=50.14 Aligned_cols=100 Identities=21% Similarity=0.302 Sum_probs=58.9
Q ss_pred CHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCC----CCCCeeeccCCCCCCCCCCCCCCCCC-c
Q psy2108 84 NLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRP----YKLPRITGLDPAMPMFMSRDRDHRLD-S 158 (345)
Q Consensus 84 ~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~----~~v~rItgLDPAgP~F~~~~~~~rL~-~ 158 (345)
..+.+|+.||+.|..- . ..-..|+||||||||-|.-++-..+.. +.|..++.+-.+-|.-. ... ..+. -
T Consensus 200 rA~~aG~~LA~~L~~~--~--~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~-~~W-~~~r~v 273 (345)
T PF05277_consen 200 RAEKAGKVLADALLSR--N--QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDP-EEW-RKIRSV 273 (345)
T ss_pred HHHHHHHHHHHHHHHh--c--CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCH-HHH-HHHHHH
Confidence 4455777777765532 1 234569999999999999988877652 23677777753332211 111 1111 1
Q ss_pred cccceeeEEecCCCcCCccccCCCcccccCC
Q psy2108 159 EDAKFVDVIHTSAFVQGQYSRSGHVDFYMNG 189 (345)
Q Consensus 159 ~DA~fVdviHT~~~~~G~~~piGh~DfypNG 189 (345)
-...+|.+.-.+...+++.-+.-...+-+.|
T Consensus 274 VsGr~vN~YS~~D~vL~~lyr~~~~~~~vaG 304 (345)
T PF05277_consen 274 VSGRLVNVYSENDWVLGFLYRASSLGLSVAG 304 (345)
T ss_pred ccCeEEEEecCcHHHHHHHHHhcccCcccce
Confidence 2346777776666667775554444444454
No 180
>PLN00413 triacylglycerol lipase
Probab=92.44 E-value=0.2 Score=51.65 Aligned_cols=24 Identities=29% Similarity=0.346 Sum_probs=20.7
Q ss_pred CCCCEEEEEecHHHHHHHHHHHHc
Q psy2108 106 VEPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 106 ~~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
+-.++++.||||||.+|..++..+
T Consensus 282 p~~kliVTGHSLGGALAtLaA~~L 305 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTAVL 305 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHHHH
Confidence 556899999999999999988643
No 181
>KOG2931|consensus
Probab=91.98 E-value=1.1 Score=43.69 Aligned_cols=99 Identities=11% Similarity=0.194 Sum_probs=68.9
Q ss_pred CCccEEEEcCCCCC----------hHHHHHHHhhcCCeEEEEEcCCCCcCC-CCcccc--ccCHHHHHHHHHHHHHHHHh
Q psy2108 35 KTFTNVIYHLMSIS----------IFFISTEYFKRGDYNVWFVNWPELCRG-PCYVIS--VYNLEQVGKCVAQMIKRLSK 101 (345)
Q Consensus 35 ~~pt~vliHG~~~s----------~~~l~~a~L~~~~~NVI~vDw~~~~~s-~~Y~~a--~~~~~~vg~~la~~i~~L~~ 101 (345)
++|.+|-.|..+.+ ..+++. ++. .+.|+-||-+|+... +..+.. ....+.+|++|-..++++
T Consensus 45 ~kpaiiTyhDlglN~~scFq~ff~~p~m~e-i~~--~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f-- 119 (326)
T KOG2931|consen 45 NKPAIITYHDLGLNHKSCFQGFFNFPDMAE-ILE--HFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHF-- 119 (326)
T ss_pred CCceEEEecccccchHhHhHHhhcCHhHHH-HHh--heEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhc--
Confidence 48888889976532 233333 332 499999999987432 112221 335666777776666666
Q ss_pred hcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCC
Q psy2108 102 YIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPA 143 (345)
Q Consensus 102 ~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPA 143 (345)
.++.|.-+|--.||.|-..+|...+ +||..|+++.+-
T Consensus 120 ----~lk~vIg~GvGAGAyIL~rFAl~hp-~rV~GLvLIn~~ 156 (326)
T KOG2931|consen 120 ----GLKSVIGMGVGAGAYILARFALNHP-ERVLGLVLINCD 156 (326)
T ss_pred ----CcceEEEecccccHHHHHHHHhcCh-hheeEEEEEecC
Confidence 6899999999999999887777665 899999887663
No 182
>KOG4372|consensus
Probab=91.86 E-value=0.091 Score=52.84 Aligned_cols=84 Identities=19% Similarity=0.180 Sum_probs=52.1
Q ss_pred cEEEEcCCCC-ChHHHHHHH----hhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHH-HHHHHhhcCCCCCCEE
Q psy2108 38 TNVIYHLMSI-SIFFISTEY----FKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQM-IKRLSKYIGDVEPDMH 111 (345)
Q Consensus 38 t~vliHG~~~-s~~~l~~a~----L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~-i~~L~~~~g~~~~~vh 111 (345)
-+|++||..+ ....++... ...++..++.-+..+. +.+....++.+|..+|+. ++.+.+ .+.++|-
T Consensus 82 LvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~-----~~~T~~Gv~~lG~Rla~~~~e~~~~---~si~kIS 153 (405)
T KOG4372|consen 82 LVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNN-----MCQTFDGVDVLGERLAEEVKETLYD---YSIEKIS 153 (405)
T ss_pred EEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccc-----hhhccccceeeecccHHHHhhhhhc---cccceee
Confidence 4788999654 433333322 2235665555555432 333355667778887775 334433 2579999
Q ss_pred EEEecHHHHHHHHHHHHc
Q psy2108 112 LIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 112 LIGHSLGAhVAg~ag~~~ 129 (345)
.|||||||-++-+|-.++
T Consensus 154 fvghSLGGLvar~AIgyl 171 (405)
T KOG4372|consen 154 FVGHSLGGLVARYAIGYL 171 (405)
T ss_pred eeeeecCCeeeeEEEEee
Confidence 999999999998776554
No 183
>PLN02802 triacylglycerol lipase
Probab=91.84 E-value=0.16 Score=52.60 Aligned_cols=43 Identities=26% Similarity=0.342 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcC
Q psy2108 88 VGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLR 130 (345)
Q Consensus 88 vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~ 130 (345)
+.++|-+-|..|.+.+.-.--+|++.||||||.+|-.++..+.
T Consensus 310 ~reqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~ 352 (509)
T PLN02802 310 LSESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADELA 352 (509)
T ss_pred HHHHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHHH
Confidence 3344444445454432211237999999999999998887653
No 184
>PLN02310 triacylglycerol lipase
Probab=91.79 E-value=0.25 Score=50.02 Aligned_cols=22 Identities=23% Similarity=0.304 Sum_probs=19.4
Q ss_pred CCEEEEEecHHHHHHHHHHHHc
Q psy2108 108 PDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 108 ~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
-+|++.||||||.+|..++..+
T Consensus 209 ~sI~vTGHSLGGALAtLaA~dl 230 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYEA 230 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHHH
Confidence 4799999999999999888654
No 185
>KOG2385|consensus
Probab=91.69 E-value=0.19 Score=52.06 Aligned_cols=118 Identities=23% Similarity=0.296 Sum_probs=74.7
Q ss_pred ccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCC----CCCCeeeccCCCCCCCCCCCCCCC
Q psy2108 80 ISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRP----YKLPRITGLDPAMPMFMSRDRDHR 155 (345)
Q Consensus 80 ~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~----~~v~rItgLDPAgP~F~~~~~~~r 155 (345)
.+.......|+.+|+.|..= . .....|+||||||||-|--..-..+.. +-|.+++.+...-|.= +...
T Consensus 423 ia~dRa~kaG~lLAe~L~~r--~--qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k----~~~w 494 (633)
T KOG2385|consen 423 IALDRADKAGELLAEALCKR--S--QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK----AKLW 494 (633)
T ss_pred HHhhHHHHHHHHHHHHHHHh--c--cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC----HHHH
Confidence 44556667888888876543 1 245789999999999998866554431 4577777776533321 1122
Q ss_pred CC--c-cccceeeEEecCCCcCCccccCCCcccccCCCcCCCCCCCCCCCCcC
Q psy2108 156 LD--S-EDAKFVDVIHTSAFVQGQYSRSGHVDFYMNGGIEQPGCWNASNPFDC 205 (345)
Q Consensus 156 L~--~-~DA~fVdviHT~~~~~G~~~piGh~DfypNGG~~QPGC~~~~~~~~C 205 (345)
++ . -...||.+.-|+.-.+|+.-..--.-|-.=+|.+||-|......+.|
T Consensus 495 ~k~r~vVsGRFVNgYs~nDW~L~~lfRa~s~~~~avaGi~~~~~i~giEnvdv 547 (633)
T KOG2385|consen 495 LKARSVVSGRFVNGYSTNDWTLGYLFRASSAQFGAVAGIPQPICIPGIENVDV 547 (633)
T ss_pred HHHHhheecceeeeeecchHHHHHHHHHhhcccccccCCCccccCCCccccch
Confidence 22 1 22379999999987777754444444544567889999765433333
No 186
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=91.54 E-value=0.85 Score=44.13 Aligned_cols=100 Identities=11% Similarity=0.190 Sum_probs=61.8
Q ss_pred CCccEEEEcCCCCC----------hHHHHHHHhhcCCeEEEEEcCCCCcCC-CCcccc--ccCHHHHHHHHHHHHHHHHh
Q psy2108 35 KTFTNVIYHLMSIS----------IFFISTEYFKRGDYNVWFVNWPELCRG-PCYVIS--VYNLEQVGKCVAQMIKRLSK 101 (345)
Q Consensus 35 ~~pt~vliHG~~~s----------~~~l~~a~L~~~~~NVI~vDw~~~~~s-~~Y~~a--~~~~~~vg~~la~~i~~L~~ 101 (345)
++|++|-.|=.+.+ ..++ ...+ +.+.|+=||-+|+... +..+.. ..+++.+|++|...++.+
T Consensus 22 ~kp~ilT~HDvGlNh~scF~~ff~~~~m-~~i~--~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f-- 96 (283)
T PF03096_consen 22 NKPAILTYHDVGLNHKSCFQGFFNFEDM-QEIL--QNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHF-- 96 (283)
T ss_dssp TS-EEEEE--TT--HHHHCHHHHCSHHH-HHHH--TTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHH--
T ss_pred CCceEEEeccccccchHHHHHHhcchhH-HHHh--hceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhC--
Confidence 69999999965433 2223 2233 4799999999997543 112221 346677888888887777
Q ss_pred hcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 102 YIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 102 ~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
.++.+..+|--.||.|-...+-..+ ++|..++++.|..
T Consensus 97 ----~lk~vIg~GvGAGAnIL~rfAl~~p-~~V~GLiLvn~~~ 134 (283)
T PF03096_consen 97 ----GLKSVIGFGVGAGANILARFALKHP-ERVLGLILVNPTC 134 (283)
T ss_dssp ----T---EEEEEETHHHHHHHHHHHHSG-GGEEEEEEES---
T ss_pred ----CccEEEEEeeccchhhhhhccccCc-cceeEEEEEecCC
Confidence 5789999999999999887776665 8999999888753
No 187
>PLN02761 lipase class 3 family protein
Probab=91.48 E-value=0.33 Score=50.52 Aligned_cols=42 Identities=31% Similarity=0.426 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHhhcCC----CCCCEEEEEecHHHHHHHHHHHHc
Q psy2108 88 VGKCVAQMIKRLSKYIGD----VEPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 88 vg~~la~~i~~L~~~~g~----~~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
+-++|-+.|..|.+.++- +.-+|++.||||||.+|..++..+
T Consensus 270 aR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DI 315 (527)
T PLN02761 270 AREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDI 315 (527)
T ss_pred HHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHH
Confidence 344555556666554310 223799999999999999888654
No 188
>PLN02162 triacylglycerol lipase
Probab=91.19 E-value=0.33 Score=49.97 Aligned_cols=24 Identities=33% Similarity=0.350 Sum_probs=20.2
Q ss_pred CCCCEEEEEecHHHHHHHHHHHHc
Q psy2108 106 VEPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 106 ~~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
+-.++++.||||||.+|-.++..+
T Consensus 276 p~~kliVTGHSLGGALAtLaAa~L 299 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPAIL 299 (475)
T ss_pred CCceEEEEecChHHHHHHHHHHHH
Confidence 456899999999999999887643
No 189
>COG0627 Predicted esterase [General function prediction only]
Probab=91.17 E-value=0.84 Score=44.84 Aligned_cols=33 Identities=12% Similarity=0.080 Sum_probs=25.5
Q ss_pred CEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCC
Q psy2108 109 DMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDP 142 (345)
Q Consensus 109 ~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDP 142 (345)
+--++|||||||=|...+.+.+ ++.+.+..+-|
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~p-d~f~~~sS~Sg 185 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHP-DRFKSASSFSG 185 (316)
T ss_pred CceeEEEeccchhhhhhhhhCc-chhceeccccc
Confidence 7899999999999998887764 56665555443
No 190
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=91.08 E-value=1.5 Score=41.80 Aligned_cols=98 Identities=14% Similarity=0.071 Sum_probs=55.1
Q ss_pred CCccEEEEcCCCC---ChHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEE
Q psy2108 35 KTFTNVIYHLMSI---SIFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMH 111 (345)
Q Consensus 35 ~~pt~vliHG~~~---s~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vh 111 (345)
+.+++|+-.|+.. ....++. ||+..|+.||-.|-..|..-..=.........--+++...++||.+. +.+++-
T Consensus 29 ~~~tiliA~Gf~rrmdh~agLA~-YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~V~dwl~~~---g~~~~G 104 (294)
T PF02273_consen 29 RNNTILIAPGFARRMDHFAGLAE-YLSANGFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLTVIDWLATR---GIRRIG 104 (294)
T ss_dssp -S-EEEEE-TT-GGGGGGHHHHH-HHHTTT--EEEE---B-------------HHHHHHHHHHHHHHHHHT---T---EE
T ss_pred cCCeEEEecchhHHHHHHHHHHH-HHhhCCeEEEeccccccccCCCCChhhcchHHhHHHHHHHHHHHHhc---CCCcch
Confidence 4488999999964 3666654 88888999999998765321111112233444567889999999854 578999
Q ss_pred EEEecHHHHHHHHHHHHcCCCCCCeeec
Q psy2108 112 LIGFSLGAHVAAYTSKYLRPYKLPRITG 139 (345)
Q Consensus 112 LIGHSLGAhVAg~ag~~~~~~~v~rItg 139 (345)
||--||-|-||-..+... .+..++.
T Consensus 105 LIAaSLSaRIAy~Va~~i---~lsfLit 129 (294)
T PF02273_consen 105 LIAASLSARIAYEVAADI---NLSFLIT 129 (294)
T ss_dssp EEEETTHHHHHHHHTTTS-----SEEEE
T ss_pred hhhhhhhHHHHHHHhhcc---CcceEEE
Confidence 999999999998887643 3555443
No 191
>PLN02753 triacylglycerol lipase
Probab=90.93 E-value=0.46 Score=49.57 Aligned_cols=42 Identities=24% Similarity=0.363 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHhhcCC---CCCCEEEEEecHHHHHHHHHHHHc
Q psy2108 88 VGKCVAQMIKRLSKYIGD---VEPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 88 vg~~la~~i~~L~~~~g~---~~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
+.++|-+.|+.|.+.+.- +--+|++.||||||.+|..++..+
T Consensus 289 ~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dl 333 (531)
T PLN02753 289 AREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDI 333 (531)
T ss_pred HHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHH
Confidence 445555555555544321 235899999999999999888654
No 192
>PLN03037 lipase class 3 family protein; Provisional
Probab=90.65 E-value=0.33 Score=50.51 Aligned_cols=22 Identities=23% Similarity=0.320 Sum_probs=19.1
Q ss_pred CCEEEEEecHHHHHHHHHHHHc
Q psy2108 108 PDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 108 ~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
-+|++.||||||.+|..++..+
T Consensus 318 ~SItVTGHSLGGALAtLaA~DI 339 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYEA 339 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHHH
Confidence 3699999999999999888554
No 193
>KOG2281|consensus
Probab=89.96 E-value=0.69 Score=49.29 Aligned_cols=175 Identities=14% Similarity=0.098 Sum_probs=98.7
Q ss_pred eeEEE-E-EEEEEeecccccccccccchhccC--CCccEEEEcCCC---------CChHHHHHHHhhcCCeEEEEEcCCC
Q psy2108 5 PVYCF-T-VSLTLNFRLRRFYAIVTEEILIRQ--KTFTNVIYHLMS---------ISIFFISTEYFKRGDYNVWFVNWPE 71 (345)
Q Consensus 5 ~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~--~~pt~vliHG~~---------~s~~~l~~a~L~~~~~NVI~vDw~~ 71 (345)
|=||. | +|++. .-.-+.|+-+.+.-.+++ +-||++.|-|-- .+...++-..|+..||-|+.+|-+|
T Consensus 608 Pdy~p~eif~fqs-~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRG 686 (867)
T KOG2281|consen 608 PDYVPPEIFSFQS-KTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRG 686 (867)
T ss_pred CccCChhheeeec-CCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCC
Confidence 44555 2 45555 222334555554444444 458999998842 1245566667777899999999998
Q ss_pred CcCC-CCccccc-cC--HHHHHHHHHHHHHHHHhhcC-CCCCCEEEEEecHHHHHHHHHHHHcCCCCCCee-eccCCCCC
Q psy2108 72 LCRG-PCYVISV-YN--LEQVGKCVAQMIKRLSKYIG-DVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRI-TGLDPAMP 145 (345)
Q Consensus 72 ~~~s-~~Y~~a~-~~--~~~vg~~la~~i~~L~~~~g-~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rI-tgLDPAgP 145 (345)
-+.- ..+-.+. .+ .-.+-++| +-+++|.+.+| +++++|-+-|+|-||.++...-.+.+ +|=|. ++=.|..
T Consensus 687 S~hRGlkFE~~ik~kmGqVE~eDQV-eglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P--~IfrvAIAGapVT- 762 (867)
T KOG2281|consen 687 SAHRGLKFESHIKKKMGQVEVEDQV-EGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYP--NIFRVAIAGAPVT- 762 (867)
T ss_pred ccccchhhHHHHhhccCeeeehhhH-HHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCc--ceeeEEeccCcce-
Confidence 6543 1111000 01 11122333 44677777665 58999999999999999988776664 33332 2222211
Q ss_pred CCCCCCCCCCCCccccceeeEEecCCCcCCccccCCCcccccCC
Q psy2108 146 MFMSRDRDHRLDSEDAKFVDVIHTSAFVQGQYSRSGHVDFYMNG 189 (345)
Q Consensus 146 ~F~~~~~~~rL~~~DA~fVdviHT~~~~~G~~~piGh~DfypNG 189 (345)
.++..+. .- -..|++.-.++...||...-.+|+.=.|+-
T Consensus 763 ~W~~YDT--gY---TERYMg~P~~nE~gY~agSV~~~Veklpde 801 (867)
T KOG2281|consen 763 DWRLYDT--GY---TERYMGYPDNNEHGYGAGSVAGHVEKLPDE 801 (867)
T ss_pred eeeeecc--cc---hhhhcCCCccchhcccchhHHHHHhhCCCC
Confidence 1111000 00 013555555555567776777788777763
No 194
>KOG3975|consensus
Probab=89.84 E-value=2.6 Score=40.37 Aligned_cols=123 Identities=13% Similarity=0.075 Sum_probs=70.6
Q ss_pred CCccEEEEcCCCC---ChHHHHHHHhhcCC--eEEEEEcCCCCcCCC---Ccccc--ccCHHHHHHHHHHHHHHHHhhcC
Q psy2108 35 KTFTNVIYHLMSI---SIFFISTEYFKRGD--YNVWFVNWPELCRGP---CYVIS--VYNLEQVGKCVAQMIKRLSKYIG 104 (345)
Q Consensus 35 ~~pt~vliHG~~~---s~~~l~~a~L~~~~--~NVI~vDw~~~~~s~---~Y~~a--~~~~~~vg~~la~~i~~L~~~~g 104 (345)
+++-++.|-|.-+ -..++..++.+.-. ..|..+--.+|+.-+ .-... ....-.+..+|..-++++++..
T Consensus 28 ~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~- 106 (301)
T KOG3975|consen 28 DKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYV- 106 (301)
T ss_pred CceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhC-
Confidence 4556667777643 35566665543211 336666666665432 00001 1122235567777788887651
Q ss_pred CCCCCEEEEEecHHHHHHHHHHHHcC-CCCCCeeeccCCCCCCCCCCCCCCCCCc
Q psy2108 105 DVEPDMHLIGFSLGAHVAAYTSKYLR-PYKLPRITGLDPAMPMFMSRDRDHRLDS 158 (345)
Q Consensus 105 ~~~~~vhLIGHSLGAhVAg~ag~~~~-~~~v~rItgLDPAgP~F~~~~~~~rL~~ 158 (345)
-.-.++++||||.||.+....-.... ...|.+..+|=|.---....+...|+.+
T Consensus 107 Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~ 161 (301)
T KOG3975|consen 107 PKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTK 161 (301)
T ss_pred CCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeee
Confidence 12357999999999999987766432 3578888888775433333333444444
No 195
>PLN02719 triacylglycerol lipase
Probab=89.64 E-value=0.63 Score=48.41 Aligned_cols=42 Identities=29% Similarity=0.384 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHhhcCC---CCCCEEEEEecHHHHHHHHHHHHc
Q psy2108 88 VGKCVAQMIKRLSKYIGD---VEPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 88 vg~~la~~i~~L~~~~g~---~~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
+.++|-+-|..|.+.+.- ..-+|++.||||||.+|..++..+
T Consensus 275 aReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 275 AREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred HHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHH
Confidence 344554555555544321 123799999999999999888655
No 196
>PLN02934 triacylglycerol lipase
Probab=88.05 E-value=0.68 Score=48.14 Aligned_cols=24 Identities=25% Similarity=0.340 Sum_probs=20.4
Q ss_pred CCCCEEEEEecHHHHHHHHHHHHc
Q psy2108 106 VEPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 106 ~~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
+-.++++.||||||.+|-.++..+
T Consensus 319 p~~kIvVTGHSLGGALAtLaA~~L 342 (515)
T PLN02934 319 KNAKFVVTGHSLGGALAILFPTVL 342 (515)
T ss_pred CCCeEEEeccccHHHHHHHHHHHH
Confidence 556899999999999999887543
No 197
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=86.51 E-value=5.7 Score=37.80 Aligned_cols=68 Identities=16% Similarity=0.137 Sum_probs=41.1
Q ss_pred hhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCC--CEEEEEecHHHHHHHHHHHHcC
Q psy2108 57 FKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEP--DMHLIGFSLGAHVAAYTSKYLR 130 (345)
Q Consensus 57 L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~--~vhLIGHSLGAhVAg~ag~~~~ 130 (345)
|.+.||-||+.=+... -.|...| +.+-+.....++.|.+..++... .++=||||||+-+-..++....
T Consensus 43 La~~Gy~ViAtPy~~t--fDH~~~A----~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~ 112 (250)
T PF07082_consen 43 LADRGYAVIATPYVVT--FDHQAIA----REVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFD 112 (250)
T ss_pred HHhCCcEEEEEecCCC--CcHHHHH----HHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhcc
Confidence 3456899998877542 1233322 22333344445555544344333 5777999999999998887653
No 198
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=86.17 E-value=3.1 Score=38.66 Aligned_cols=78 Identities=14% Similarity=0.144 Sum_probs=46.2
Q ss_pred CCccEEEEcCCCCChHHHHHHHhhcCCeEE-EEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEE
Q psy2108 35 KTFTNVIYHLMSISIFFISTEYFKRGDYNV-WFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLI 113 (345)
Q Consensus 35 ~~pt~vliHG~~~s~~~l~~a~L~~~~~NV-I~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLI 113 (345)
+...+|+.-||+..-..+....+ .+++.| ++.||+.+--. .+ +. ..++|+||
T Consensus 10 ~~~LilfF~GWg~d~~~f~hL~~-~~~~D~l~~yDYr~l~~d--------------------~~-~~-----~y~~i~lv 62 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSPFSHLIL-PENYDVLICYDYRDLDFD--------------------FD-LS-----GYREIYLV 62 (213)
T ss_pred CCeEEEEEecCCCChHHhhhccC-CCCccEEEEecCcccccc--------------------cc-cc-----cCceEEEE
Confidence 34567778899987555543222 234444 45677654211 01 11 35799999
Q ss_pred EecHHHHHHHHHHHHcCCCCCCeeeccCC
Q psy2108 114 GFSLGAHVAAYTSKYLRPYKLPRITGLDP 142 (345)
Q Consensus 114 GHSLGAhVAg~ag~~~~~~~v~rItgLDP 142 (345)
++|||--+|..+-+. -++.+-+++.-
T Consensus 63 AWSmGVw~A~~~l~~---~~~~~aiAING 88 (213)
T PF04301_consen 63 AWSMGVWAANRVLQG---IPFKRAIAING 88 (213)
T ss_pred EEeHHHHHHHHHhcc---CCcceeEEEEC
Confidence 999999988665432 34566665543
No 199
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=85.79 E-value=9.4 Score=38.50 Aligned_cols=104 Identities=13% Similarity=-0.105 Sum_probs=61.9
Q ss_pred hccCCCccEEEEcCCCCC-----hHHHHHHHhhcCCeEEEEEcCCCCcCCCCcccc------ccCHHHHHHHHHHHHHHH
Q psy2108 31 LIRQKTFTNVIYHLMSIS-----IFFISTEYFKRGDYNVWFVNWPELCRGPCYVIS------VYNLEQVGKCVAQMIKRL 99 (345)
Q Consensus 31 ~~~~~~pt~vliHG~~~s-----~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a------~~~~~~vg~~la~~i~~L 99 (345)
..++.+|.+|++=|-+.- ...+...+.++-+.-||++..|-.|.|..+... -.+++..-+|+|.|++.+
T Consensus 24 ~~~~~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~ 103 (434)
T PF05577_consen 24 YYKPGGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYV 103 (434)
T ss_dssp T--TTSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHH
T ss_pred hcCCCCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHH
Confidence 344456766666554321 111222333444788999999999987433221 136677788999999999
Q ss_pred HhhcC-CCCCCEEEEEecHHHHHHHHHHHHcCCCCCC
Q psy2108 100 SKYIG-DVEPDMHLIGFSLGAHVAAYTSKYLRPYKLP 135 (345)
Q Consensus 100 ~~~~g-~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~ 135 (345)
+.... .+-.++.++|-|-||.+|.++-..+| +.+.
T Consensus 104 ~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP-~~~~ 139 (434)
T PF05577_consen 104 KKKYNTAPNSPWIVFGGSYGGALAAWFRLKYP-HLFD 139 (434)
T ss_dssp HHHTTTGCC--EEEEEETHHHHHHHHHHHH-T-TT-S
T ss_pred HHhhcCCCCCCEEEECCcchhHHHHHHHhhCC-CeeE
Confidence 86543 23357999999999999999988886 5544
No 200
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=85.28 E-value=2.9 Score=41.28 Aligned_cols=68 Identities=16% Similarity=0.199 Sum_probs=46.9
Q ss_pred CeEEEEEcCCCCcCCCCccccc----cCHHHHHHHHHHHHHHHHhhc-CCCCCCEEEEEecHHHHHHHHHHHHc
Q psy2108 61 DYNVWFVNWPELCRGPCYVISV----YNLEQVGKCVAQMIKRLSKYI-GDVEPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 61 ~~NVI~vDw~~~~~s~~Y~~a~----~~~~~vg~~la~~i~~L~~~~-g~~~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
..||+-||.+...-- .|.... .+...+++++.+||+.....+ .+.-.+++|.|-|-|||-+-.++.++
T Consensus 85 ~an~l~iD~PvGtGf-S~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i 157 (415)
T PF00450_consen 85 FANLLFIDQPVGTGF-SYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYI 157 (415)
T ss_dssp TSEEEEE--STTSTT--EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHH
T ss_pred ccceEEEeecCceEE-eeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhh
Confidence 589999998865332 344332 367889999999998765443 34455899999999999887666654
No 201
>KOG2100|consensus
Probab=84.40 E-value=3.3 Score=45.36 Aligned_cols=113 Identities=12% Similarity=-0.061 Sum_probs=65.6
Q ss_pred chhccCCCccEEEEcCCCC-------ChHHHHHHHhhcCCeEEEEEcCCCCcCC-CCcccccc-CH--HHHHHHHHHHHH
Q psy2108 29 EILIRQKTFTNVIYHLMSI-------SIFFISTEYFKRGDYNVWFVNWPELCRG-PCYVISVY-NL--EQVGKCVAQMIK 97 (345)
Q Consensus 29 ~~~~~~~~pt~vliHG~~~-------s~~~l~~a~L~~~~~NVI~vDw~~~~~s-~~Y~~a~~-~~--~~vg~~la~~i~ 97 (345)
+.+-+.+-|.+|.+||--. +..++........++-|+.||.++-+-. ..+..+.. +. ..| ++.-..+.
T Consensus 519 ~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev-~D~~~~~~ 597 (755)
T KOG2100|consen 519 NFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEV-KDQIEAVK 597 (755)
T ss_pred CCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcch-HHHHHHHH
Confidence 3334445677888898532 1223333345567899999999985432 12221111 11 112 22223333
Q ss_pred HHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCee-eccCCC
Q psy2108 98 RLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRI-TGLDPA 143 (345)
Q Consensus 98 ~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rI-tgLDPA 143 (345)
.+.+..-++.++|-+.|+|-||-++..+...-+ +++-+. +.+.|.
T Consensus 598 ~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~-~~~fkcgvavaPV 643 (755)
T KOG2100|consen 598 KVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDP-GDVFKCGVAVAPV 643 (755)
T ss_pred HHHhcccccHHHeEEeccChHHHHHHHHhhhCc-CceEEEEEEecce
Confidence 343443578899999999999999987766543 455554 777775
No 202
>KOG2369|consensus
Probab=83.25 E-value=1.6 Score=44.90 Aligned_cols=39 Identities=21% Similarity=0.256 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcC
Q psy2108 90 KCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLR 130 (345)
Q Consensus 90 ~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~ 130 (345)
..++++|+...+.. .-++|.||+||||+.+.-+.-+.+.
T Consensus 166 ~kLK~~iE~~~~~~--G~kkVvlisHSMG~l~~lyFl~w~~ 204 (473)
T KOG2369|consen 166 SKLKKKIETMYKLN--GGKKVVLISHSMGGLYVLYFLKWVE 204 (473)
T ss_pred HHHHHHHHHHHHHc--CCCceEEEecCCccHHHHHHHhccc
Confidence 34555555554432 2489999999999999999887764
No 203
>KOG4840|consensus
Probab=82.90 E-value=3.1 Score=39.28 Aligned_cols=100 Identities=13% Similarity=0.163 Sum_probs=63.0
Q ss_pred ccEEEEcCCCC------ChHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCE
Q psy2108 37 FTNVIYHLMSI------SIFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDM 110 (345)
Q Consensus 37 pt~vliHG~~~------s~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~v 110 (345)
--+|||-|.+. ....+.+ +|.+..+.++.+-.+..-. .|- ....++=.++|-.+|+.|... +. -++|
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~-~lde~~wslVq~q~~Ssy~--G~G--t~slk~D~edl~~l~~Hi~~~-~f-St~v 109 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNR-YLDENSWSLVQPQLRSSYN--GYG--TFSLKDDVEDLKCLLEHIQLC-GF-STDV 109 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHH-HHhhccceeeeeecccccc--ccc--cccccccHHHHHHHHHHhhcc-Cc-ccce
Confidence 34778888753 2555555 5666789999888765321 122 233444457888888877543 33 3499
Q ss_pred EEEEecHHHHHHHHHHHH-cCCCCCCeeeccCCC
Q psy2108 111 HLIGFSLGAHVAAYTSKY-LRPYKLPRITGLDPA 143 (345)
Q Consensus 111 hLIGHSLGAhVAg~ag~~-~~~~~v~rItgLDPA 143 (345)
.|+|||-|.+=..++-.. ..+.+|..-++..|.
T Consensus 110 VL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApV 143 (299)
T KOG4840|consen 110 VLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPV 143 (299)
T ss_pred EEEecCccchHHHHHHHhccchHHHHHHHHhCcc
Confidence 999999999988776632 223455555556554
No 204
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=82.66 E-value=13 Score=39.18 Aligned_cols=103 Identities=16% Similarity=0.102 Sum_probs=71.9
Q ss_pred ccchhccCCCccEEEE-----cCC--CC--ChHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHH
Q psy2108 27 TEEILIRQKTFTNVIY-----HLM--SI--SIFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIK 97 (345)
Q Consensus 27 ~~~~~~~~~~pt~vli-----HG~--~~--s~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~ 97 (345)
.++...++.++|.|+| ||- +. .-.++--+ |+ .|+-|..|.+... |.....+..|....+.|++
T Consensus 59 p~~~~~d~~krP~vViDPRAGHGpGIGGFK~dSevG~A-L~-~GHPvYFV~F~p~------P~pgQTl~DV~~ae~~Fv~ 130 (581)
T PF11339_consen 59 PEGVPVDPTKRPFVVIDPRAGHGPGIGGFKPDSEVGVA-LR-AGHPVYFVGFFPE------PEPGQTLEDVMRAEAAFVE 130 (581)
T ss_pred CCCCCCCCCCCCeEEeCCCCCCCCCccCCCcccHHHHH-HH-cCCCeEEEEecCC------CCCCCcHHHHHHHHHHHHH
Confidence 3445566666666666 542 11 12334444 43 4788988888643 3446778889999999999
Q ss_pred HHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeec
Q psy2108 98 RLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITG 139 (345)
Q Consensus 98 ~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItg 139 (345)
.+.+... ...+..|||..-||..+..+++..+ ++++-|+.
T Consensus 131 ~V~~~hp-~~~kp~liGnCQgGWa~~mlAA~~P-d~~gplvl 170 (581)
T PF11339_consen 131 EVAERHP-DAPKPNLIGNCQGGWAAMMLAALRP-DLVGPLVL 170 (581)
T ss_pred HHHHhCC-CCCCceEEeccHHHHHHHHHHhcCc-CccCceee
Confidence 9976543 2239999999999999998888775 78888774
No 205
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=81.21 E-value=2.2 Score=45.45 Aligned_cols=38 Identities=11% Similarity=0.038 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHc
Q psy2108 90 KCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 90 ~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
..|.++|+.+.+.. .-++|.|||||||+.++-+.-+.+
T Consensus 197 ~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~lyFL~wv 234 (642)
T PLN02517 197 SRLKSNIELMVATN--GGKKVVVVPHSMGVLYFLHFMKWV 234 (642)
T ss_pred HHHHHHHHHHHHHc--CCCeEEEEEeCCchHHHHHHHHhc
Confidence 35666666665432 247899999999999999876543
No 206
>KOG3043|consensus
Probab=80.97 E-value=3.5 Score=38.82 Aligned_cols=95 Identities=15% Similarity=0.108 Sum_probs=58.7
Q ss_pred cCCCCC-hHHHHHHHhhcCCeEEEEEcCCCCc-CCCC-----ccc--cccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEE
Q psy2108 43 HLMSIS-IFFISTEYFKRGDYNVWFVNWPELC-RGPC-----YVI--SVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLI 113 (345)
Q Consensus 43 HG~~~s-~~~l~~a~L~~~~~NVI~vDw~~~~-~s~~-----Y~~--a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLI 113 (345)
-||..+ .+..++. ++-.+|+|+++|+-..- .++. ++. -..+-+..=+++..++++|+.+ | ...+|=++
T Consensus 49 fG~~~~n~r~~Adk-~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~-g-~~kkIGv~ 125 (242)
T KOG3043|consen 49 FGFQFPNTREGADK-VALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNH-G-DSKKIGVV 125 (242)
T ss_pred eccccHHHHHHHHH-HhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHc-C-CcceeeEE
Confidence 366655 5566664 44569999999987650 1111 110 0123334557899999999865 4 57899999
Q ss_pred EecHHHHHHHHHHHHcCCCCCCeeeccCC
Q psy2108 114 GFSLGAHVAAYTSKYLRPYKLPRITGLDP 142 (345)
Q Consensus 114 GHSLGAhVAg~ag~~~~~~~v~rItgLDP 142 (345)
|+.+||-++-...... ..+.+++.+=|
T Consensus 126 GfCwGak~vv~~~~~~--~~f~a~v~~hp 152 (242)
T KOG3043|consen 126 GFCWGAKVVVTLSAKD--PEFDAGVSFHP 152 (242)
T ss_pred EEeecceEEEEeeccc--hhheeeeEecC
Confidence 9999998865433221 14455554433
No 207
>KOG3967|consensus
Probab=80.38 E-value=8.4 Score=36.23 Aligned_cols=39 Identities=13% Similarity=0.096 Sum_probs=32.4
Q ss_pred CCCCCEEEEEecHHHHHHHHHHHHcCC-CCCCeeeccCCC
Q psy2108 105 DVEPDMHLIGFSLGAHVAAYTSKYLRP-YKLPRITGLDPA 143 (345)
Q Consensus 105 ~~~~~vhLIGHSLGAhVAg~ag~~~~~-~~v~rItgLDPA 143 (345)
...+++.++.||-||....-.-.+++. ++|..|..-|.+
T Consensus 187 a~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 187 AKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred cCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 367999999999999999888888763 677777777876
No 208
>KOG4569|consensus
Probab=80.17 E-value=2.5 Score=41.67 Aligned_cols=37 Identities=22% Similarity=0.314 Sum_probs=25.8
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcC
Q psy2108 92 VAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLR 130 (345)
Q Consensus 92 la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~ 130 (345)
+.+-++.|.+.+ +-=+|.+-||||||.+|..++..+.
T Consensus 157 ~~~~~~~L~~~~--~~~~i~vTGHSLGgAlA~laa~~i~ 193 (336)
T KOG4569|consen 157 LDAELRRLIELY--PNYSIWVTGHSLGGALASLAALDLV 193 (336)
T ss_pred HHHHHHHHHHhc--CCcEEEEecCChHHHHHHHHHHHHH
Confidence 333344444332 3458999999999999999988754
No 209
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=79.33 E-value=2.2 Score=41.60 Aligned_cols=26 Identities=23% Similarity=0.322 Sum_probs=22.9
Q ss_pred CCCCCEEEEEecHHHHHHHHHHHHcC
Q psy2108 105 DVEPDMHLIGFSLGAHVAAYTSKYLR 130 (345)
Q Consensus 105 ~~~~~vhLIGHSLGAhVAg~ag~~~~ 130 (345)
++-.+|.|-||||||.+|...|.+++
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 273 YPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCCceEEEeccccchHHHHHhccccC
Confidence 46679999999999999999998764
No 210
>KOG4540|consensus
Probab=79.33 E-value=2.2 Score=41.60 Aligned_cols=26 Identities=23% Similarity=0.322 Sum_probs=22.9
Q ss_pred CCCCCEEEEEecHHHHHHHHHHHHcC
Q psy2108 105 DVEPDMHLIGFSLGAHVAAYTSKYLR 130 (345)
Q Consensus 105 ~~~~~vhLIGHSLGAhVAg~ag~~~~ 130 (345)
++-.+|.|-||||||.+|...|.+++
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 273 YPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCCceEEEeccccchHHHHHhccccC
Confidence 46679999999999999999998764
No 211
>KOG2551|consensus
Probab=78.80 E-value=8.2 Score=36.22 Aligned_cols=32 Identities=28% Similarity=0.380 Sum_probs=21.9
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHH
Q psy2108 92 VAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSK 127 (345)
Q Consensus 92 la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~ 127 (345)
++-+-+++.++ | +.+- |||+|-||.+|++++.
T Consensus 92 l~yl~~~i~en-G-PFDG--llGFSQGA~laa~l~~ 123 (230)
T KOG2551|consen 92 LEYLEDYIKEN-G-PFDG--LLGFSQGAALAALLAG 123 (230)
T ss_pred HHHHHHHHHHh-C-CCcc--ccccchhHHHHHHhhc
Confidence 44444455444 4 4443 7999999999998876
No 212
>KOG2029|consensus
Probab=77.88 E-value=5.3 Score=42.45 Aligned_cols=62 Identities=11% Similarity=0.136 Sum_probs=39.4
Q ss_pred CCeEEEEEcCCCCcCC-CCccccccCHHHHHHHHHHHHHHHHhhcCCC-CCCEEEEEecHHHHHH
Q psy2108 60 GDYNVWFVNWPELCRG-PCYVISVYNLEQVGKCVAQMIKRLSKYIGDV-EPDMHLIGFSLGAHVA 122 (345)
Q Consensus 60 ~~~NVI~vDw~~~~~s-~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~-~~~vhLIGHSLGAhVA 122 (345)
++.+||.+++..--.. ..|-.+....+.++....+|++.|+.. ++. -.-|.-|||||||-.|
T Consensus 477 p~~Rii~l~Y~Tsit~w~~~~p~e~~r~sl~~Rs~~lleql~~~-~VG~~RPivwI~HSmGGLl~ 540 (697)
T KOG2029|consen 477 PKSRIIGLEYTTSITDWRARCPAEAHRRSLAARSNELLEQLQAA-GVGDDRPIVWIGHSMGGLLA 540 (697)
T ss_pred ccceEEEeecccchhhhcccCcccchhhHHHHHHHHHHHHHHHh-ccCCCCceEEEecccchHHH
Confidence 4578888877652111 011122334556677777888888765 665 4568999999999554
No 213
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=75.35 E-value=2.8 Score=44.84 Aligned_cols=74 Identities=20% Similarity=0.256 Sum_probs=49.5
Q ss_pred HHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeec-----------cCCCCCCCCCCCCCCCCCcccccee
Q psy2108 96 IKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITG-----------LDPAMPMFMSRDRDHRLDSEDAKFV 164 (345)
Q Consensus 96 i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItg-----------LDPAgP~F~~~~~~~rL~~~DA~fV 164 (345)
.+.|.++.--..+++.++|-|.||.++|.++..-+ +..+.|++ |||+.|+-.. +..+.=+|.|+++-
T Consensus 515 a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P-~lf~~iiA~VPFVDvltTMlD~slPLT~~-E~~EWGNP~d~e~y 592 (682)
T COG1770 515 ARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAP-DLFAGIIAQVPFVDVLTTMLDPSLPLTVT-EWDEWGNPLDPEYY 592 (682)
T ss_pred HHHHHHcCcCCccceEEeccCchhHHHHHHHhhCh-hhhhheeecCCccchhhhhcCCCCCCCcc-chhhhCCcCCHHHH
Confidence 45565542236789999999999999999998754 66666664 6777776432 23344445566666
Q ss_pred eEEecCC
Q psy2108 165 DVIHTSA 171 (345)
Q Consensus 165 dviHT~~ 171 (345)
+.|-+..
T Consensus 593 ~yikSYS 599 (682)
T COG1770 593 DYIKSYS 599 (682)
T ss_pred HHHhhcC
Confidence 6665554
No 214
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=69.45 E-value=13 Score=39.34 Aligned_cols=71 Identities=11% Similarity=0.005 Sum_probs=50.5
Q ss_pred HhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHc
Q psy2108 56 YFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 56 ~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
++...||-||.+|-+|-+.|..-...... + =+++-.+.|+||.+. -..-.+|-.+|-|-+|...-+++..-
T Consensus 75 ~~aa~GYavV~qDvRG~~~SeG~~~~~~~-~-E~~Dg~D~I~Wia~Q-pWsNG~Vgm~G~SY~g~tq~~~Aa~~ 145 (563)
T COG2936 75 WFAAQGYAVVNQDVRGRGGSEGVFDPESS-R-EAEDGYDTIEWLAKQ-PWSNGNVGMLGLSYLGFTQLAAAALQ 145 (563)
T ss_pred eeecCceEEEEecccccccCCcccceecc-c-cccchhHHHHHHHhC-CccCCeeeeecccHHHHHHHHHHhcC
Confidence 45567999999999998777421111111 1 235777889999764 22345899999999999999888754
No 215
>smart00037 CNX Connexin homologues. Connexin channels participate in the regulation of signaling between developing and differentiated cell types.
Probab=69.42 E-value=3.3 Score=27.26 Aligned_cols=24 Identities=46% Similarity=0.818 Sum_probs=15.6
Q ss_pred ccccCCCcCCCCCCCC--CCCCcCCCCc
Q psy2108 184 DFYMNGGIEQPGCWNA--SNPFDCNHRR 209 (345)
Q Consensus 184 DfypNGG~~QPGC~~~--~~~~~CsH~r 209 (345)
||--| +.||||.+- +..+..||.|
T Consensus 9 ~FvCn--T~QPGC~nvCyD~~fPiSh~R 34 (34)
T smart00037 9 DFVCN--TQQPGCENVCYDQAFPISHVR 34 (34)
T ss_pred hceec--CCCCCccceeccccccCccCC
Confidence 55545 679999763 2345677776
No 216
>KOG2237|consensus
Probab=64.75 E-value=6.6 Score=42.06 Aligned_cols=97 Identities=7% Similarity=-0.119 Sum_probs=54.6
Q ss_pred ccCCCccEEEEcCC-CC----ChHHHHHHHhhcCCeEEEEEcCCCCcCC--CCccccccCHH--HHHHHHHHHHHHHHhh
Q psy2108 32 IRQKTFTNVIYHLM-SI----SIFFISTEYFKRGDYNVWFVNWPELCRG--PCYVISVYNLE--QVGKCVAQMIKRLSKY 102 (345)
Q Consensus 32 ~~~~~pt~vliHG~-~~----s~~~l~~a~L~~~~~NVI~vDw~~~~~s--~~Y~~a~~~~~--~vg~~la~~i~~L~~~ 102 (345)
.+.++|.+|..||- +. ++..-+.-++. .|.-....|-+|+|.- ..+......-+ .+.+.+ .-.+.|.++
T Consensus 466 ~dg~~P~LLygYGay~isl~p~f~~srl~lld-~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfi-a~AeyLve~ 543 (712)
T KOG2237|consen 466 LDGSKPLLLYGYGAYGISLDPSFRASRLSLLD-RGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFI-ACAEYLVEN 543 (712)
T ss_pred hcCCCceEEEEecccceeeccccccceeEEEe-cceEEEEEeeccCcccccchhhccchhhhcccHHHHH-HHHHHHHHc
Confidence 34466777777762 21 23332333454 4666666777877643 11211110000 111222 224566665
Q ss_pred cCCCCCCEEEEEecHHHHHHHHHHHHcC
Q psy2108 103 IGDVEPDMHLIGFSLGAHVAAYTSKYLR 130 (345)
Q Consensus 103 ~g~~~~~vhLIGHSLGAhVAg~ag~~~~ 130 (345)
.-..++++.+.|.|.||-++|.+...-|
T Consensus 544 gyt~~~kL~i~G~SaGGlLvga~iN~rP 571 (712)
T KOG2237|consen 544 GYTQPSKLAIEGGSAGGLLVGACINQRP 571 (712)
T ss_pred CCCCccceeEecccCccchhHHHhccCc
Confidence 3357899999999999999999987654
No 217
>KOG4389|consensus
Probab=59.81 E-value=11 Score=39.53 Aligned_cols=61 Identities=18% Similarity=0.104 Sum_probs=43.0
Q ss_pred cCCeEEEEEcCCCCcCCC----CccccccCHHHHHHHHHHHHHHHHhh---cCCCCCCEEEEEecHHHHH
Q psy2108 59 RGDYNVWFVNWPELCRGP----CYVISVYNLEQVGKCVAQMIKRLSKY---IGDVEPDMHLIGFSLGAHV 121 (345)
Q Consensus 59 ~~~~NVI~vDw~~~~~s~----~Y~~a~~~~~~vg~~la~~i~~L~~~---~g~~~~~vhLIGHSLGAhV 121 (345)
+++.=|+.++++-.+-.- .-+.+..|+...-++|| |.|++++ +|-++++|.|.|-|.||.-
T Consensus 164 ~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLA--l~WV~~Ni~aFGGnp~~vTLFGESAGaAS 231 (601)
T KOG4389|consen 164 VENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLA--LQWVQENIAAFGGNPSRVTLFGESAGAAS 231 (601)
T ss_pred eccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHH--HHHHHHhHHHhCCCcceEEEeccccchhh
Confidence 444555555666543221 23467789988888887 7888764 5779999999999999853
No 218
>KOG3253|consensus
Probab=58.46 E-value=20 Score=38.39 Aligned_cols=85 Identities=15% Similarity=0.047 Sum_probs=52.2
Q ss_pred CCccEEEEcCCC------CChHHHHHHH-hhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHH--HHhhcCC
Q psy2108 35 KTFTNVIYHLMS------ISIFFISTEY-FKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKR--LSKYIGD 105 (345)
Q Consensus 35 ~~pt~vliHG~~------~s~~~l~~a~-L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~--L~~~~g~ 105 (345)
..|.+|++||.. .+.+.+...+ +.-+-..|-..|+... ....++...++.+-.|... ++-...+
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~-------igG~nI~h~ae~~vSf~r~kvlei~gef 247 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNP-------IGGANIKHAAEYSVSFDRYKVLEITGEF 247 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCC-------CCCcchHHHHHHHHHHhhhhhhhhhccC
Confidence 447788999864 1122222221 1112245666666543 2336777788888777773 3333346
Q ss_pred CCCCEEEEEecHHHHHHHHHH
Q psy2108 106 VEPDMHLIGFSLGAHVAAYTS 126 (345)
Q Consensus 106 ~~~~vhLIGHSLGAhVAg~ag 126 (345)
+...|.|+|.||||-||-.+.
T Consensus 248 pha~IiLvGrsmGAlVachVS 268 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVS 268 (784)
T ss_pred CCCceEEEecccCceeeEEec
Confidence 889999999999988876654
No 219
>KOG4388|consensus
Probab=55.81 E-value=19 Score=38.55 Aligned_cols=58 Identities=12% Similarity=0.024 Sum_probs=37.8
Q ss_pred CCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHh---hcCCCCCCEEEEEecHHHHHHHHH
Q psy2108 60 GDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSK---YIGDVEPDMHLIGFSLGAHVAAYT 125 (345)
Q Consensus 60 ~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~---~~g~~~~~vhLIGHSLGAhVAg~a 125 (345)
-|.-||.|||+-.-.. .+|.+.. .+--.--|+.+ ..|---|+|.++|-|.||.+.--+
T Consensus 426 L~cPiiSVdYSLAPEa-PFPRale-------Ev~fAYcW~inn~allG~TgEriv~aGDSAGgNL~~~V 486 (880)
T KOG4388|consen 426 LGCPIISVDYSLAPEA-PFPRALE-------EVFFAYCWAINNCALLGSTGERIVLAGDSAGGNLCFTV 486 (880)
T ss_pred hCCCeEEeeeccCCCC-CCCcHHH-------HHHHHHHHHhcCHHHhCcccceEEEeccCCCcceeehh
Confidence 3788999999865555 3665432 22222334432 236667999999999999876433
No 220
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=55.40 E-value=43 Score=32.56 Aligned_cols=66 Identities=12% Similarity=0.138 Sum_probs=41.2
Q ss_pred eEEEEEcCCCCcCCCCcccc----ccCHHHHHHHHHHHHHHHHh-hcCCCCCCEEEEEecHHHHHHHHHHHHc
Q psy2108 62 YNVWFVNWPELCRGPCYVIS----VYNLEQVGKCVAQMIKRLSK-YIGDVEPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 62 ~NVI~vDw~~~~~s~~Y~~a----~~~~~~vg~~la~~i~~L~~-~~g~~~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
.|||-+|-|....- .|... ..+...+ +++-.||+...+ ...+.-.++||.|-|-|||-+=.++.++
T Consensus 2 aNvLfiDqPvGvGf-Sy~~~~~~~~~d~~~a-~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I 72 (319)
T PLN02213 2 ANIIFLDQPVGSGF-SYSKTPIDKTGDISEV-KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEI 72 (319)
T ss_pred ccEEEecCCCCCCC-CCCCCCCCccccHHHH-HHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHH
Confidence 48999999954332 34322 1222333 666665554433 2234567899999999999876666654
No 221
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=54.86 E-value=26 Score=35.95 Aligned_cols=67 Identities=10% Similarity=0.083 Sum_probs=41.6
Q ss_pred CeEEEEEcCCCCcCCCCcccc----ccCHHHHHHHHHHHHHHHH-hhcCCCCCCEEEEEecHHHHHHHHHHHHc
Q psy2108 61 DYNVWFVNWPELCRGPCYVIS----VYNLEQVGKCVAQMIKRLS-KYIGDVEPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 61 ~~NVI~vDw~~~~~s~~Y~~a----~~~~~~vg~~la~~i~~L~-~~~g~~~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
..|||-+|-+....- .|... ..+.. .++++.+||.... ....+...+++|.|.|-|||-+-.+++++
T Consensus 115 ~anllfiDqPvGtGf-Sy~~~~~~~~~d~~-~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i 186 (433)
T PLN03016 115 MANIIFLDQPVGSGF-SYSKTPIDKTGDIS-EVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEI 186 (433)
T ss_pred cCcEEEecCCCCCCc-cCCCCCCCccCCHH-HHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHH
Confidence 489999997765433 24322 11222 3356666665443 32233457899999999999887777665
No 222
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=54.06 E-value=32 Score=31.89 Aligned_cols=66 Identities=17% Similarity=0.082 Sum_probs=37.8
Q ss_pred CCeEEEEEcCCCCcCCCCcc-ccc---cCHH--HHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHH
Q psy2108 60 GDYNVWFVNWPELCRGPCYV-ISV---YNLE--QVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKY 128 (345)
Q Consensus 60 ~~~NVI~vDw~~~~~s~~Y~-~a~---~~~~--~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~ 128 (345)
+-.||+++=|+..... .+. ... .... ..++..+.|-.+|... + +-..+.|+|||-|+.+.-.+-+.
T Consensus 44 ~~~~vfAP~YRQatl~-~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~-n-~GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 44 GVCNVFAPRYRQATLY-AFLDTDREDAEKAFDLAYSDVRAAFDYYLANY-N-NGRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred cCCccccChhhcchhh-hhhccCcchhHHHHHhhHHHHHHHHHHHHHhc-C-CCCCEEEEEeChHHHHHHHHHHH
Confidence 3468988888764332 111 110 0111 1234445555555433 2 23579999999999998877654
No 223
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=50.31 E-value=8.1 Score=32.20 Aligned_cols=21 Identities=14% Similarity=0.086 Sum_probs=11.1
Q ss_pred ccCCCccEEEEcCCCCChHHH
Q psy2108 32 IRQKTFTNVIYHLMSISIFFI 52 (345)
Q Consensus 32 ~~~~~pt~vliHG~~~s~~~l 52 (345)
-+++..|+||+|||-+|+.++
T Consensus 88 ~~~~aiPLll~HGWPgSf~Ef 108 (112)
T PF06441_consen 88 KRPNAIPLLLLHGWPGSFLEF 108 (112)
T ss_dssp S-TT-EEEEEE--SS--GGGG
T ss_pred CCCCCeEEEEECCCCccHHhH
Confidence 345667899999998886544
No 224
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=50.00 E-value=56 Score=30.75 Aligned_cols=66 Identities=18% Similarity=0.207 Sum_probs=41.7
Q ss_pred ccCCCccEEEEcCCCCC-h--HHHHHHHhhcCCe-EEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCC
Q psy2108 32 IRQKTFTNVIYHLMSIS-I--FFISTEYFKRGDY-NVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVE 107 (345)
Q Consensus 32 ~~~~~pt~vliHG~~~s-~--~~l~~a~L~~~~~-NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~ 107 (345)
++.+.-++++.||.... + -...+..+...++ ||++.--. .|| .+..+|+.|+++ ..
T Consensus 134 l~k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve------~yP-----------~~d~vi~~l~~~---~~ 193 (265)
T COG4822 134 LNKDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVE------GYP-----------LVDTVIEYLRKN---GI 193 (265)
T ss_pred cCcCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEec------CCC-----------cHHHHHHHHHHc---CC
Confidence 44455577788997543 2 2223445555666 88776543 365 345678889876 57
Q ss_pred CCEEEEEecH
Q psy2108 108 PDMHLIGFSL 117 (345)
Q Consensus 108 ~~vhLIGHSL 117 (345)
+.||||=.=|
T Consensus 194 ~~v~L~PlMl 203 (265)
T COG4822 194 KEVHLIPLML 203 (265)
T ss_pred ceEEEeeeEE
Confidence 8899987643
No 225
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=47.16 E-value=1.1e+02 Score=27.79 Aligned_cols=81 Identities=15% Similarity=0.119 Sum_probs=44.2
Q ss_pred cEEEEcCCCCC-hHHH---HHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEE
Q psy2108 38 TNVIYHLMSIS-IFFI---STEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLI 113 (345)
Q Consensus 38 t~vliHG~~~s-~~~l---~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLI 113 (345)
|+|+|=||.+. ...+ .+.|.+ .+++|+.+=-+...- ..+ ...+. ..+..+++.+.+...-....+.+=
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~-~g~~il~~~~~~~~~--~~~--~~~~~---~~~~~l~~~l~~~~~~~~~~il~H 72 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQD-PGFDILLVTSPPADF--FWP--SKRLA---PAADKLLELLSDSQSASPPPILFH 72 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHh-cCCeEEEEeCCHHHH--eee--ccchH---HHHHHHHHHhhhhccCCCCCEEEE
Confidence 57888888654 3333 344554 789999876543211 111 12333 344445555554311112389999
Q ss_pred EecHHHHH-HHHHH
Q psy2108 114 GFSLGAHV-AAYTS 126 (345)
Q Consensus 114 GHSLGAhV-Ag~ag 126 (345)
.+|.||-. .+...
T Consensus 73 ~FSnGG~~~~~~l~ 86 (240)
T PF05705_consen 73 SFSNGGSFLYSQLL 86 (240)
T ss_pred EEECchHHHHHHHH
Confidence 99995544 44444
No 226
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=47.10 E-value=46 Score=34.80 Aligned_cols=89 Identities=19% Similarity=0.196 Sum_probs=55.6
Q ss_pred CCccEEEEcCCCCC----hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCE
Q psy2108 35 KTFTNVIYHLMSIS----IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDM 110 (345)
Q Consensus 35 ~~pt~vliHG~~~s----~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~v 110 (345)
|.|-.|..-|...- .-.|.+. |..+ =.+.-|-+-.|.+ .|..+. ..-+.|-+.|+.-.+..|++.+++
T Consensus 288 KPPL~VYFSGyR~aEGFEgy~MMk~-Lg~P--fLL~~DpRleGGa-FYlGs~----eyE~~I~~~I~~~L~~LgF~~~qL 359 (511)
T TIGR03712 288 KPPLNVYFSGYRPAEGFEGYFMMKR-LGAP--FLLIGDPRLEGGA-FYLGSD----EYEQGIINVIQEKLDYLGFDHDQL 359 (511)
T ss_pred CCCeEEeeccCcccCcchhHHHHHh-cCCC--eEEeeccccccce-eeeCcH----HHHHHHHHHHHHHHHHhCCCHHHe
Confidence 55667777887432 1222332 2221 2566677766665 465432 233444444444444449999999
Q ss_pred EEEEecHHHHHHHHHHHHcCC
Q psy2108 111 HLIGFSLGAHVAAYTSKYLRP 131 (345)
Q Consensus 111 hLIGHSLGAhVAg~ag~~~~~ 131 (345)
.|-|-|||.-=|.++|+.+.+
T Consensus 360 ILSGlSMGTfgAlYYga~l~P 380 (511)
T TIGR03712 360 ILSGLSMGTFGALYYGAKLSP 380 (511)
T ss_pred eeccccccchhhhhhcccCCC
Confidence 999999999999999998754
No 227
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=46.72 E-value=63 Score=31.45 Aligned_cols=68 Identities=19% Similarity=0.266 Sum_probs=38.6
Q ss_pred HHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHh----hcCCCCCCEEEEEecHHHHHHHHH
Q psy2108 55 EYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSK----YIGDVEPDMHLIGFSLGAHVAAYT 125 (345)
Q Consensus 55 a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~----~~g~~~~~vhLIGHSLGAhVAg~a 125 (345)
+|+-.+|..++++-|+....-..|.........-|+. |++.+.+ ...-..-+++|.|-||||.-+-.+
T Consensus 55 E~l~~GD~A~va~QYSylPSw~sfl~dr~~a~~a~~a---L~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~a 126 (289)
T PF10081_consen 55 EYLYGGDVAIVAMQYSYLPSWLSFLVDRDAAREAARA---LFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAA 126 (289)
T ss_pred HHHhCCCeEEEEeccccccchHHHhcccchHHHHHHH---HHHHHHHHHHhCCcccCCeEEEeccCccccchhhh
Confidence 4677789999999998764322232222222222332 2333322 111134689999999999865433
No 228
>KOG1202|consensus
Probab=45.94 E-value=83 Score=36.83 Aligned_cols=95 Identities=15% Similarity=0.144 Sum_probs=54.9
Q ss_pred ccCCCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCcccc--ccCHHHHHHHHHHHHHHHHhhcCCC
Q psy2108 32 IRQKTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVIS--VYNLEQVGKCVAQMIKRLSKYIGDV 106 (345)
Q Consensus 32 ~~~~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a--~~~~~~vg~~la~~i~~L~~~~g~~ 106 (345)
...+.|+++|+|-.-.. ...++.. |.-+ ..+.+ +..+ ...+..++++ +|+.+++. .+
T Consensus 2119 ~~se~~~~Ffv~pIEG~tt~l~~la~r-le~P----------aYglQ--~T~~vP~dSies~A~~---yirqirkv--QP 2180 (2376)
T KOG1202|consen 2119 VQSEEPPLFFVHPIEGFTTALESLASR-LEIP----------AYGLQ--CTEAVPLDSIESLAAY---YIRQIRKV--QP 2180 (2376)
T ss_pred hcccCCceEEEeccccchHHHHHHHhh-cCCc----------chhhh--ccccCCcchHHHHHHH---HHHHHHhc--CC
Confidence 34466899999965433 3333332 1111 11221 2222 2344444444 45555432 25
Q ss_pred CCCEEEEEecHHHHHHHHHHHHcCC-CCCCeeeccCCCC
Q psy2108 107 EPDMHLIGFSLGAHVAAYTSKYLRP-YKLPRITGLDPAM 144 (345)
Q Consensus 107 ~~~vhLIGHSLGAhVAg~ag~~~~~-~~v~rItgLDPAg 144 (345)
....+|+|+|.||-+|-.++..+.. +....++.||-+.
T Consensus 2181 ~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2181 EGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred CCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 5689999999999999888877652 3345588888763
No 229
>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins. Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=45.62 E-value=29 Score=28.78 Aligned_cols=49 Identities=8% Similarity=0.158 Sum_probs=31.7
Q ss_pred EEEEEEeeeeccCcccccCCCeeEEEeecc-cCceeeeec------CCCchhHhHHHH
Q psy2108 279 VFIVSTILLFQMSAATYRKPPFNGSIFGKR-STNTIEFDS------NTGKTFASMCEI 329 (345)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~ppf~~sL~Gt~-~~~~i~~~~------~~~~t~~~~~~~ 329 (345)
.|+|.+.. +....+. ++..+.++|||++ +++.+.+.. .+|++.+|.++.
T Consensus 2 ~Y~v~v~T-g~~~gAG-T~a~V~i~L~G~~g~s~~~~L~~~~~~~F~rG~~~~f~i~~ 57 (120)
T cd01752 2 LYLVTVFT-GWRRGAG-TTAKVTITLYGAEGESEPHHLRDPEKPIFERGSVDSFLLTT 57 (120)
T ss_pred EEEEEEEE-CCCCCCC-cccEEEEEEEeCCCCcccEEcCCCCccceeCCCeeEEEecC
Confidence 46664443 3333443 8889999999999 677777763 255666665554
No 230
>PF03283 PAE: Pectinacetylesterase
Probab=44.30 E-value=40 Score=33.69 Aligned_cols=57 Identities=19% Similarity=0.235 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhhcCC-CCCCEEEEEecHHHHHHHHHHHHcCCCCC---CeeeccCCCCCCCCC
Q psy2108 91 CVAQMIKRLSKYIGD-VEPDMHLIGFSLGAHVAAYTSKYLRPYKL---PRITGLDPAMPMFMS 149 (345)
Q Consensus 91 ~la~~i~~L~~~~g~-~~~~vhLIGHSLGAhVAg~ag~~~~~~~v---~rItgLDPAgP~F~~ 149 (345)
.+..+|++|.++ |+ +.++|.|-|-|.||--+..-..++. +++ .++.++.=+|..+..
T Consensus 139 i~~avl~~l~~~-gl~~a~~vlltG~SAGG~g~~~~~d~~~-~~lp~~~~v~~~~DsG~f~d~ 199 (361)
T PF03283_consen 139 ILRAVLDDLLSN-GLPNAKQVLLTGCSAGGLGAILHADYVR-DRLPSSVKVKCLSDSGFFLDN 199 (361)
T ss_pred HHHHHHHHHHHh-cCcccceEEEeccChHHHHHHHHHHHHH-HHhccCceEEEeccccccccc
Confidence 345567777766 33 4789999999999998877666553 333 377777777776643
No 231
>KOG2183|consensus
Probab=43.94 E-value=93 Score=32.13 Aligned_cols=90 Identities=13% Similarity=0.040 Sum_probs=60.3
Q ss_pred ccEEEEcCCCCC----------hHHHHHHHhhcCCeEEEEEcCCCCcCCCCcccc-c--------cCHHHHHHHHHHHHH
Q psy2108 37 FTNVIYHLMSIS----------IFFISTEYFKRGDYNVWFVNWPELCRGPCYVIS-V--------YNLEQVGKCVAQMIK 97 (345)
Q Consensus 37 pt~vliHG~~~s----------~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a-~--------~~~~~vg~~la~~i~ 97 (345)
-||++.-|.-+. .++++..+ +.-+|-+..+-.|++..|-.. . .++.+.-++-|.+|.
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~----~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~ 156 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPEL----KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLT 156 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhh----CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHH
Confidence 568888885322 34444432 466888888887776433221 1 134444467788888
Q ss_pred HHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcC
Q psy2108 98 RLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLR 130 (345)
Q Consensus 98 ~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~ 130 (345)
.|++..+..-..|..+|-|-||.+|.+.=-.++
T Consensus 157 ~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYP 189 (492)
T KOG2183|consen 157 FLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYP 189 (492)
T ss_pred HHhhccccccCcEEEecCchhhHHHHHHHhcCh
Confidence 888776666778999999999999988754443
No 232
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=42.20 E-value=18 Score=33.66 Aligned_cols=18 Identities=22% Similarity=0.211 Sum_probs=13.9
Q ss_pred CCCCEEEEEecHHHHHHH
Q psy2108 106 VEPDMHLIGFSLGAHVAA 123 (345)
Q Consensus 106 ~~~~vhLIGHSLGAhVAg 123 (345)
+.+.|.++|||||--=.-
T Consensus 233 ~i~~I~i~GhSl~~~D~~ 250 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVDYP 250 (270)
T ss_pred CCCEEEEEeCCCchhhHH
Confidence 468999999999864333
No 233
>PLN02209 serine carboxypeptidase
Probab=39.96 E-value=67 Score=32.98 Aligned_cols=67 Identities=10% Similarity=0.066 Sum_probs=41.0
Q ss_pred CeEEEEEcCCCCcCCCCcccc----ccCHHHHHHHHHHHHHHHHhh-cCCCCCCEEEEEecHHHHHHHHHHHHc
Q psy2108 61 DYNVWFVNWPELCRGPCYVIS----VYNLEQVGKCVAQMIKRLSKY-IGDVEPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 61 ~~NVI~vDw~~~~~s~~Y~~a----~~~~~~vg~~la~~i~~L~~~-~g~~~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
..||+-+|-+....- .|... ..+. ..++++.+||+...+. ..+...+++|.|.|-|||-+=.++..+
T Consensus 117 ~anllfiDqPvGtGf-Sy~~~~~~~~~~~-~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i 188 (437)
T PLN02209 117 TANIIFLDQPVGSGF-SYSKTPIERTSDT-SEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEI 188 (437)
T ss_pred cCcEEEecCCCCCCc-cCCCCCCCccCCH-HHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHH
Confidence 479999997765432 24221 1222 3446666666644332 233446899999999999765555544
No 234
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=38.15 E-value=1.8e+02 Score=26.28 Aligned_cols=71 Identities=15% Similarity=0.163 Sum_probs=48.1
Q ss_pred hhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecH----HHHHHHHHHHHcCCC
Q psy2108 57 FKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSL----GAHVAAYTSKYLRPY 132 (345)
Q Consensus 57 L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSL----GAhVAg~ag~~~~~~ 132 (345)
...+--.|+.+|-+.... .+...+++.|+++++.. + -++.|+|||. |..+++.++.++.-.
T Consensus 73 ~~~G~d~V~~~~~~~~~~--------~~~e~~a~al~~~i~~~------~-p~lVL~~~t~~~~~grdlaprlAarLga~ 137 (202)
T cd01714 73 LAMGADRAILVSDRAFAG--------ADTLATAKALAAAIKKI------G-VDLILTGKQSIDGDTGQVGPLLAELLGWP 137 (202)
T ss_pred HHcCCCEEEEEecccccC--------CChHHHHHHHHHHHHHh------C-CCEEEEcCCcccCCcCcHHHHHHHHhCCC
Confidence 333334788877665432 23455566666665543 3 4799999999 889999999998756
Q ss_pred CCCeeeccCC
Q psy2108 133 KLPRITGLDP 142 (345)
Q Consensus 133 ~v~rItgLDP 142 (345)
-+.-++.|..
T Consensus 138 lvsdv~~l~~ 147 (202)
T cd01714 138 QITYVSKIEI 147 (202)
T ss_pred ccceEEEEEE
Confidence 7777777643
No 235
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=37.75 E-value=49 Score=34.58 Aligned_cols=78 Identities=17% Similarity=0.074 Sum_probs=49.2
Q ss_pred CeEEEEEcCCCCcCCCCc---cccccCHHHHHHHHHHHHHHHHhhc---CCCCCCEEEEEecHHHHHHHHHHHHcCCC--
Q psy2108 61 DYNVWFVNWPELCRGPCY---VISVYNLEQVGKCVAQMIKRLSKYI---GDVEPDMHLIGFSLGAHVAAYTSKYLRPY-- 132 (345)
Q Consensus 61 ~~NVI~vDw~~~~~s~~Y---~~a~~~~~~vg~~la~~i~~L~~~~---g~~~~~vhLIGHSLGAhVAg~ag~~~~~~-- 132 (345)
..++|-+|.+-.... .| .....++..+++++-.+++.+.+.+ +-...+.||+|-|-|||=+-..+..+..+
T Consensus 146 ~adLvFiDqPvGTGf-S~a~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~ 224 (498)
T COG2939 146 FADLVFIDQPVGTGF-SRALGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNI 224 (498)
T ss_pred CCceEEEecCcccCc-ccccccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhcc
Confidence 368999997653221 12 1234566677777777766665431 22346899999999999887777666421
Q ss_pred CCCeeec
Q psy2108 133 KLPRITG 139 (345)
Q Consensus 133 ~v~rItg 139 (345)
-+++++.
T Consensus 225 ~~~~~~n 231 (498)
T COG2939 225 ALNGNVN 231 (498)
T ss_pred ccCCceE
Confidence 2455554
No 236
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=36.57 E-value=75 Score=27.56 Aligned_cols=34 Identities=26% Similarity=0.128 Sum_probs=25.5
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHH
Q psy2108 92 VAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKY 128 (345)
Q Consensus 92 la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~ 128 (345)
-+.+++.|+++ ++.+ =+++|=|.||.+|+.++..
T Consensus 15 ~~Gvl~~L~~~-~~~~--d~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 15 HIGVLKALEEA-GIPI--DIVSGTSAGAIVGALYAAG 48 (175)
T ss_pred HHHHHHHHHHc-CCCe--eEEEEECHHHHHHHHHHcC
Confidence 35667788765 5444 3899999999999988753
No 237
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=36.05 E-value=72 Score=29.35 Aligned_cols=34 Identities=21% Similarity=0.191 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHH
Q psy2108 91 CVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSK 127 (345)
Q Consensus 91 ~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~ 127 (345)
.-+.+++.|++. |++++ .++|=|.||.+|..++.
T Consensus 14 ~~~GvL~aL~e~-gi~~~--~i~GtSaGAi~aa~~a~ 47 (221)
T cd07210 14 AHLGFLAALLEM-GLEPS--AISGTSAGALVGGLFAS 47 (221)
T ss_pred HHHHHHHHHHHc-CCCce--EEEEeCHHHHHHHHHHc
Confidence 334567778765 55554 79999999999988875
No 238
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=34.03 E-value=91 Score=28.92 Aligned_cols=39 Identities=21% Similarity=0.138 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHH
Q psy2108 89 GKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKY 128 (345)
Q Consensus 89 g~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~ 128 (345)
|-.-+-.++.|.++ |+.++--.++|=|.||.+|..++..
T Consensus 11 g~yh~GVl~~L~e~-gi~~~~~~i~G~SAGAl~aa~~asg 49 (233)
T cd07224 11 FPYHLGVLSLLIEA-GVINETTPLAGASAGSLAAACSASG 49 (233)
T ss_pred HHHHHHHHHHHHHc-CCCCCCCEEEEEcHHHHHHHHHHcC
Confidence 33445567888765 6555566899999999999888754
No 239
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=33.74 E-value=44 Score=34.64 Aligned_cols=43 Identities=16% Similarity=0.200 Sum_probs=39.0
Q ss_pred hhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 101 KYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 101 ~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
..+|.+++.-+..|-|-||.-+..++++++ +-...|++-.||-
T Consensus 108 ~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP-~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 108 AFYGKAPKYSYFSGCSTGGRQGLMAAQRYP-EDFDGILAGAPAI 150 (474)
T ss_pred HHhCCCCCceEEEEeCCCcchHHHHHHhCh-hhcCeEEeCCchH
Confidence 346778999999999999999999999996 8999999999995
No 240
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=33.24 E-value=89 Score=31.90 Aligned_cols=29 Identities=21% Similarity=0.208 Sum_probs=23.3
Q ss_pred CEEEEEecHHHHHHHHHHHHcCCCCCCeee
Q psy2108 109 DMHLIGFSLGAHVAAYTSKYLRPYKLPRIT 138 (345)
Q Consensus 109 ~vhLIGHSLGAhVAg~ag~~~~~~~v~rIt 138 (345)
++.++|+|-||.+|-.+++.-| .-+..|+
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP-~~~~~~i 213 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAP-WLFDGVI 213 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCc-cceeEEE
Confidence 8899999999999999998654 5555544
No 241
>KOG2182|consensus
Probab=32.91 E-value=2.9e+02 Score=29.14 Aligned_cols=115 Identities=10% Similarity=-0.045 Sum_probs=72.6
Q ss_pred hccCCCccEEEEcCCCC----C----hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccc-cc-----cCHHHHHHHHHHHH
Q psy2108 31 LIRQKTFTNVIYHLMSI----S----IFFISTEYFKRGDYNVWFVNWPELCRGPCYVI-SV-----YNLEQVGKCVAQMI 96 (345)
Q Consensus 31 ~~~~~~pt~vliHG~~~----s----~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~-a~-----~~~~~vg~~la~~i 96 (345)
+.++++|.-++|=|=+. | ...+.. +.++-+.-|+.+..|=.|.+..... +. ......=.+||+||
T Consensus 81 ~~~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~-~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI 159 (514)
T KOG2182|consen 81 WAKPGGPIFLMIGGEGPESDKWVGNENLTWLQ-WAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFI 159 (514)
T ss_pred cccCCCceEEEEcCCCCCCCCccccCcchHHH-HHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHH
Confidence 44778888888888321 1 111111 2334478899999888886632221 11 13345567899999
Q ss_pred HHHHhhcCCCCC-CEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCCCCCCCCC
Q psy2108 97 KRLSKYIGDVEP-DMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDPAMPMFMS 149 (345)
Q Consensus 97 ~~L~~~~g~~~~-~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDPAgP~F~~ 149 (345)
+.|..+++.+-+ +....|-|--|.+|..+=..+| +.+-. .+..++|....
T Consensus 160 ~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yP-el~~G--svASSapv~A~ 210 (514)
T KOG2182|consen 160 KAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYP-ELTVG--SVASSAPVLAK 210 (514)
T ss_pred HHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCc-hhhee--ecccccceeEE
Confidence 999877765444 8999999999999998876665 33221 24455665543
No 242
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=32.81 E-value=46 Score=25.35 Aligned_cols=42 Identities=12% Similarity=0.103 Sum_probs=28.4
Q ss_pred ccCCCccEEEEcCCC-CChHHHHHHHhhcCCeEEE--EEcCCCCc
Q psy2108 32 IRQKTFTNVIYHLMS-ISIFFISTEYFKRGDYNVW--FVNWPELC 73 (345)
Q Consensus 32 ~~~~~pt~vliHG~~-~s~~~l~~a~L~~~~~NVI--~vDw~~~~ 73 (345)
+....|.++||||-. .-...++..|-++.++.++ -.||..+|
T Consensus 27 ~~~~~~~~~lvhGga~~GaD~iA~~wA~~~gv~~~~~~adW~~hG 71 (71)
T PF10686_consen 27 VHARHPDMVLVHGGAPKGADRIAARWARERGVPVIRFPADWQRHG 71 (71)
T ss_pred HHHhCCCEEEEECCCCCCHHHHHHHHHHHCCCeeEEeCcChhhCC
Confidence 344558899999987 5567777777766666444 45776653
No 243
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=32.22 E-value=77 Score=30.24 Aligned_cols=42 Identities=24% Similarity=0.273 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHc
Q psy2108 87 QVGKCVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 87 ~vg~~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
.+.+.|.+...+|.+++ .+-++|.|+|+|=||-.|-..+..+
T Consensus 72 g~~~~I~~ay~~l~~~~-~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNY-EPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred chHHHHHHHHHHHHhcc-CCcceEEEEecCccHHHHHHHHHHH
Confidence 35567777777786665 3667899999999999998887665
No 244
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=31.57 E-value=74 Score=25.32 Aligned_cols=51 Identities=22% Similarity=0.331 Sum_probs=36.1
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcCCCCCCee-eccCCCCCC
Q psy2108 92 VAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRI-TGLDPAMPM 146 (345)
Q Consensus 92 la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rI-tgLDPAgP~ 146 (345)
++.+++.|++.. .+.+|++-|-+-..|+|-..-.. ..+.+|| +||+++++.
T Consensus 29 ~~~~~~~l~~~L--G~QdV~V~Gip~~sh~ArvLVeA--DyrMKrIg~Gle~~~~~ 80 (84)
T PF07643_consen 29 PAAWVDGLRQAL--GPQDVTVYGIPADSHFARVLVEA--DYRMKRIGMGLEDSPVR 80 (84)
T ss_pred HHHHHHHHHHHh--CCceeEEEccCCccHHHHHHHHh--hhHHHHhccCcccCCcC
Confidence 445667776654 58999999999999999755432 2356665 478877654
No 245
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=31.56 E-value=82 Score=29.59 Aligned_cols=30 Identities=30% Similarity=0.367 Sum_probs=20.6
Q ss_pred HHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHc
Q psy2108 97 KRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 97 ~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
+.|.+ .|+.+ -.++|||||--.|.+++..+
T Consensus 74 ~~l~~-~Gi~p--~~~~GhSlGE~aA~~~ag~~ 103 (298)
T smart00827 74 RLWRS-WGVRP--DAVVGHSLGEIAAAYVAGVL 103 (298)
T ss_pred HHHHH-cCCcc--cEEEecCHHHHHHHHHhCCC
Confidence 44433 36544 58999999999888776443
No 246
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=30.80 E-value=60 Score=34.37 Aligned_cols=29 Identities=14% Similarity=0.058 Sum_probs=20.5
Q ss_pred HHhhcCCCCCCEEEEEecHHHHHHHHHHHHc
Q psy2108 99 LSKYIGDVEPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 99 L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
|.+.+|+.++ .++|||||=..|..++--+
T Consensus 258 l~~~~GI~Pd--av~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 258 LCDEFAIKPD--FALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHhcCCCCC--EEeecCHHHHHHHHHhCCC
Confidence 3345565554 8999999988887776544
No 247
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=30.14 E-value=1.1e+02 Score=26.50 Aligned_cols=37 Identities=27% Similarity=0.126 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHcC
Q psy2108 91 CVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYLR 130 (345)
Q Consensus 91 ~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~~ 130 (345)
.=+..++.|+++ | +.--.++|=|+||.+|..++....
T Consensus 12 ~~~Gvl~aL~e~-g--i~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 12 YHVGVAKALRER-G--PLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHHHHHc-C--CCCCEEEEECHHHHHHHHHHcCCC
Confidence 334567888776 4 446788999999999998886543
No 248
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=28.80 E-value=29 Score=25.83 Aligned_cols=19 Identities=16% Similarity=-0.033 Sum_probs=10.0
Q ss_pred hhccCCCccEEEEcCCCCC
Q psy2108 30 ILIRQKTFTNVIYHLMSIS 48 (345)
Q Consensus 30 ~~~~~~~pt~vliHG~~~s 48 (345)
.....++|+++|.||+..+
T Consensus 37 ~~~~~~k~pVll~HGL~~s 55 (63)
T PF04083_consen 37 SNQNKKKPPVLLQHGLLQS 55 (63)
T ss_dssp TTTTTT--EEEEE--TT--
T ss_pred cccCCCCCcEEEECCcccC
Confidence 4456678999999998654
No 249
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=28.39 E-value=3e+02 Score=28.14 Aligned_cols=83 Identities=16% Similarity=0.217 Sum_probs=56.6
Q ss_pred HHHHHHhhcCCeEEEEEcCCCCcCCCCccc----------------c-------ccCHHHHHHHHHHHHHHHHhhcCCCC
Q psy2108 51 FISTEYFKRGDYNVWFVNWPELCRGPCYVI----------------S-------VYNLEQVGKCVAQMIKRLSKYIGDVE 107 (345)
Q Consensus 51 ~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~----------------a-------~~~~~~vg~~la~~i~~L~~~~g~~~ 107 (345)
-+++. +.+.+.+|+.+|-+..+.. .++. + ...+..+++.+++++..|.++ | .+
T Consensus 19 yl~~~-i~~~G~~v~~iDvg~~~~~-~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~v~~l~~~-g-~i 94 (403)
T PF06792_consen 19 YLRDQ-IEAQGVEVLLIDVGTLGEP-SFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAARFVSDLYDE-G-KI 94 (403)
T ss_pred HHHHH-HHHCCCcEEEEEcCCCCCC-CCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHHHHHHHHHhc-C-Cc
Confidence 34443 4457899999999887543 2220 0 013345667777777777664 2 46
Q ss_pred CCEEEEEecHHHHHHHHHHHHcCCCCCCeee
Q psy2108 108 PDMHLIGFSLGAHVAAYTSKYLRPYKLPRIT 138 (345)
Q Consensus 108 ~~vhLIGHSLGAhVAg~ag~~~~~~~v~rIt 138 (345)
+-|.-+|-|.|..+|..+-+.+| --+.++.
T Consensus 95 ~Gvi~~GGs~GT~lat~aMr~LP-iG~PKlm 124 (403)
T PF06792_consen 95 DGVIGIGGSGGTALATAAMRALP-IGFPKLM 124 (403)
T ss_pred cEEEEecCCccHHHHHHHHHhCC-CCCCeEE
Confidence 77889999999999999999886 4455554
No 250
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=27.71 E-value=1.1e+02 Score=29.00 Aligned_cols=22 Identities=27% Similarity=0.365 Sum_probs=17.4
Q ss_pred CCEEEEEecHHHHHHHHHHHHc
Q psy2108 108 PDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 108 ~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
+...++|||+|--.|.+++-.+
T Consensus 76 ~P~~v~GhS~GE~aAa~~aG~~ 97 (295)
T TIGR03131 76 RPSAVAGYSVGEYAAAVVAGVL 97 (295)
T ss_pred CCcEEeecCHHHHHHHHHhCCC
Confidence 5568999999998888776443
No 251
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=27.40 E-value=1.4e+02 Score=27.23 Aligned_cols=34 Identities=26% Similarity=0.167 Sum_probs=25.3
Q ss_pred HHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHHc
Q psy2108 93 AQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 93 a~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
+-+++.|.+. |+. -=.++|-|.||-+|..++...
T Consensus 14 ~Gvl~aL~e~-g~~--~d~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 14 AGVLKALAEA-GIE--PDIISGTSIGAINGALIAGGD 47 (215)
T ss_pred HHHHHHHHHc-CCC--CCEEEEECHHHHHHHHHHcCC
Confidence 4567778765 543 348899999999998887643
No 252
>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.
Probab=26.89 E-value=1e+02 Score=24.87 Aligned_cols=49 Identities=10% Similarity=0.118 Sum_probs=31.6
Q ss_pred EEEEEEeeeeccCcccccCCCeeEEEeecc-cCceeeeec-----CCCchhHhHHHH
Q psy2108 279 VFIVSTILLFQMSAATYRKPPFNGSIFGKR-STNTIEFDS-----NTGKTFASMCEI 329 (345)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~ppf~~sL~Gt~-~~~~i~~~~-----~~~~t~~~~~~~ 329 (345)
+|+|.+..-... . .-++....++|||++ +++.+.+.. .+|++.++.++.
T Consensus 2 ~Y~v~V~Tg~~~-~-agT~~~v~i~l~g~~g~s~~~~l~~~~~~f~~g~~~~f~v~~ 56 (116)
T cd00113 2 RYTVTIKTGDKK-G-AGTDSNISLALYGENGNSSDIPILDGPGSFERGSTDTFQIDL 56 (116)
T ss_pred EEEEEEEECCCC-C-CCccCEEEEEEEeCCCCcccEEccCCCCcccCCCceEEEEec
Confidence 466665544443 2 357888999999999 666666653 255666665544
No 253
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=26.19 E-value=77 Score=30.98 Aligned_cols=19 Identities=32% Similarity=0.258 Sum_probs=15.3
Q ss_pred EEEEecHHHHHHHHHHHHc
Q psy2108 111 HLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 111 hLIGHSLGAhVAg~ag~~~ 129 (345)
.++|||||=-.|..++..+
T Consensus 127 ~~~GHSlGE~aA~~~AG~l 145 (343)
T PLN02752 127 VCAGLSLGEYTALVFAGAL 145 (343)
T ss_pred eeeeccHHHHHHHHHhCCC
Confidence 6899999998888777443
No 254
>KOG1551|consensus
Probab=25.92 E-value=78 Score=30.90 Aligned_cols=36 Identities=17% Similarity=0.263 Sum_probs=26.8
Q ss_pred CCCCEEEEEecHHHHHHHHHHHHcCCCCCCeeeccCC
Q psy2108 106 VEPDMHLIGFSLGAHVAAYTSKYLRPYKLPRITGLDP 142 (345)
Q Consensus 106 ~~~~vhLIGHSLGAhVAg~ag~~~~~~~v~rItgLDP 142 (345)
.+.++.|+|-||||-+|..+|...+ ..|.-+--|.|
T Consensus 193 g~g~~~~~g~Smgg~~a~~vgS~~q-~Pva~~p~l~~ 228 (371)
T KOG1551|consen 193 GLGNLNLVGRSMGGDIANQVGSLHQ-KPVATAPCLNS 228 (371)
T ss_pred CcccceeeeeecccHHHHhhcccCC-CCccccccccc
Confidence 5689999999999999999998653 44444444443
No 255
>PRK12467 peptide synthase; Provisional
Probab=25.62 E-value=2.9e+02 Score=36.43 Aligned_cols=104 Identities=16% Similarity=0.103 Sum_probs=63.9
Q ss_pred CCccEEEEcCCCCC---hHHHHHHHhhcCCeEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEE
Q psy2108 35 KTFTNVIYHLMSIS---IFFISTEYFKRGDYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMH 111 (345)
Q Consensus 35 ~~pt~vliHG~~~s---~~~l~~a~L~~~~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vh 111 (345)
..+.++..|..... ...+.. .+ ..+..|+++......... . .....+.++...++.+.+.+. ....+
T Consensus 3691 ~~~~l~~~h~~~r~~~~~~~l~~-~l-~~~~~~~~l~~~~~~~d~-~--~~~~~~~~~~~y~~~~~~~~~-----~~p~~ 3760 (3956)
T PRK12467 3691 GFPALFCRHEGLGTVFDYEPLAV-IL-EGDRHVLGLTCRHLLDDG-W--QDTSLQAMAVQYADYILWQQA-----KGPYG 3760 (3956)
T ss_pred cccceeeechhhcchhhhHHHHH-Hh-CCCCcEEEEecccccccc-C--CccchHHHHHHHHHHHHHhcc-----CCCee
Confidence 44668899975432 223322 33 346788888776543321 1 123445556666666666532 34689
Q ss_pred EEEecHHHHHHHHHHHHcC--CCCCCeeeccCCCCCCCC
Q psy2108 112 LIGFSLGAHVAAYTSKYLR--PYKLPRITGLDPAMPMFM 148 (345)
Q Consensus 112 LIGHSLGAhVAg~ag~~~~--~~~v~rItgLDPAgP~F~ 148 (345)
+.|+|+||.+|-.+++.+. ++.+.-+..+|...|.+.
T Consensus 3761 l~g~s~g~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 3799 (3956)
T PRK12467 3761 LLGWSLGGTLARLVAELLEREGESEAFLGLFDNTLPLPD 3799 (3956)
T ss_pred eeeeecchHHHHHHHHHHHHcCCceeEEEEEeccccccc
Confidence 9999999999988877653 345555556677777665
No 256
>KOG1282|consensus
Probab=25.54 E-value=1.2e+02 Score=31.34 Aligned_cols=68 Identities=15% Similarity=0.156 Sum_probs=47.5
Q ss_pred CeEEEEEcCCCCcCCCCccccc----cCHHHHHHHHHHHHH-HHHhhcCCCCCCEEEEEecHHHHHHHHHHHHc
Q psy2108 61 DYNVWFVNWPELCRGPCYVISV----YNLEQVGKCVAQMIK-RLSKYIGDVEPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 61 ~~NVI~vDw~~~~~s~~Y~~a~----~~~~~vg~~la~~i~-~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
-.|||-+|-|....- .|.... .+-..+++++-.||. |+++...+.-.+++|.|-|-+||..=.+++.+
T Consensus 117 ~aNiLfLd~PvGvGF-SYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I 189 (454)
T KOG1282|consen 117 EANILFLDQPVGVGF-SYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEI 189 (454)
T ss_pred cccEEEEecCCcCCc-cccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHH
Confidence 479999999876543 454332 344567777766665 55554445668999999999999886666554
No 257
>COG4425 Predicted membrane protein [Function unknown]
Probab=25.22 E-value=1.2e+02 Score=31.62 Aligned_cols=73 Identities=23% Similarity=0.149 Sum_probs=43.7
Q ss_pred CCCCChHHHHHHHhhcCCeEEEEEcCCCCcC------CCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEecH
Q psy2108 44 LMSISIFFISTEYFKRGDYNVWFVNWPELCR------GPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFSL 117 (345)
Q Consensus 44 G~~~s~~~l~~a~L~~~~~NVI~vDw~~~~~------s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHSL 117 (345)
||-..+..=.-+||..+|.-.+++-|+-+.. .+.|. +...+.+=+.+-..+..|-+. +..|++|-|-||
T Consensus 332 GWIdp~a~~t~EyL~~Gd~asVsmQYSyL~SwLSllvdpdyg--~~aa~aLf~aVy~yw~qLP~~---sRPKLylhG~SL 406 (588)
T COG4425 332 GWIDPAAADTLEYLYNGDVASVSMQYSYLPSWLSLLVDPDYG--ADAARALFEAVYGYWTQLPKS---SRPKLYLHGESL 406 (588)
T ss_pred CCCCHHHHhHHHHHhCCceEEEEEehhhHHHHHHHhcCCCcc--hhHHHHHHHHHHHHHHhCCcC---CCCceEEecccc
Confidence 4443333223368888889999999887642 12333 222233344454555555332 567999999999
Q ss_pred HHHH
Q psy2108 118 GAHV 121 (345)
Q Consensus 118 GAhV 121 (345)
||.=
T Consensus 407 Ga~~ 410 (588)
T COG4425 407 GAMG 410 (588)
T ss_pred cccc
Confidence 9864
No 258
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=24.34 E-value=1.6e+02 Score=25.78 Aligned_cols=33 Identities=27% Similarity=0.232 Sum_probs=25.4
Q ss_pred HHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHH
Q psy2108 93 AQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKY 128 (345)
Q Consensus 93 a~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~ 128 (345)
+.+++.|++. ++.+ =.++|=|.||.+|..++..
T Consensus 15 ~Gvl~~L~e~-~~~~--d~i~GtSaGai~aa~~a~g 47 (194)
T cd07207 15 IGALKALEEA-GILK--KRVAGTSAGAITAALLALG 47 (194)
T ss_pred HHHHHHHHHc-CCCc--ceEEEECHHHHHHHHHHcC
Confidence 5677888765 5444 6889999999999888753
No 259
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.04 E-value=1.7e+02 Score=26.56 Aligned_cols=77 Identities=12% Similarity=0.098 Sum_probs=46.6
Q ss_pred cEEEEcCCCCChHHHHHHHhhcCCe-EEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEec
Q psy2108 38 TNVIYHLMSISIFFISTEYFKRGDY-NVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKYIGDVEPDMHLIGFS 116 (345)
Q Consensus 38 t~vliHG~~~s~~~l~~a~L~~~~~-NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~~g~~~~~vhLIGHS 116 (345)
.+|..-||+.....+....+ .+++ =+++.|+..+-....+. -.+.+.||.+|
T Consensus 13 LIvyFaGwgtpps~v~HLil-peN~dl~lcYDY~dl~ldfDfs--------------------------Ay~hirlvAwS 65 (214)
T COG2830 13 LIVYFAGWGTPPSAVNHLIL-PENHDLLLCYDYQDLNLDFDFS--------------------------AYRHIRLVAWS 65 (214)
T ss_pred EEEEEecCCCCHHHHhhccC-CCCCcEEEEeehhhcCcccchh--------------------------hhhhhhhhhhh
Confidence 45566789876555544333 3343 36778887653321100 13468889999
Q ss_pred HHHHHHHHHHHHcCCCCCCeeeccCCCC
Q psy2108 117 LGAHVAAYTSKYLRPYKLPRITGLDPAM 144 (345)
Q Consensus 117 LGAhVAg~ag~~~~~~~v~rItgLDPAg 144 (345)
||--||-.+-+- -+++.-|+++-.|
T Consensus 66 MGVwvAeR~lqg---~~lksatAiNGTg 90 (214)
T COG2830 66 MGVWVAERVLQG---IRLKSATAINGTG 90 (214)
T ss_pred HHHHHHHHHHhh---ccccceeeecCCC
Confidence 999998877553 3566666665543
No 260
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=23.90 E-value=72 Score=30.68 Aligned_cols=22 Identities=27% Similarity=0.209 Sum_probs=17.4
Q ss_pred CCCEEEEEecHHHHHHHHHHHH
Q psy2108 107 EPDMHLIGFSLGAHVAAYTSKY 128 (345)
Q Consensus 107 ~~~vhLIGHSLGAhVAg~ag~~ 128 (345)
.+.-.++|||||=..|.+++-.
T Consensus 83 i~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 83 IKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HCESEEEESTTHHHHHHHHTTS
T ss_pred cccceeeccchhhHHHHHHCCc
Confidence 5666789999999888877643
No 261
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=23.49 E-value=1.5e+02 Score=30.25 Aligned_cols=35 Identities=23% Similarity=0.123 Sum_probs=26.4
Q ss_pred HHHHHHHHHHhhcCCCCCCEEEEEecHHHHHHHHHHHH
Q psy2108 91 CVAQMIKRLSKYIGDVEPDMHLIGFSLGAHVAAYTSKY 128 (345)
Q Consensus 91 ~la~~i~~L~~~~g~~~~~vhLIGHSLGAhVAg~ag~~ 128 (345)
.=+-.++.|.++ |+.++ .++|=|.||.||+.++..
T Consensus 87 ~hiGVLkaL~E~-gl~p~--vIsGTSaGAivAal~as~ 121 (421)
T cd07230 87 FHIGVLKALFEA-NLLPR--IISGSSAGSIVAAILCTH 121 (421)
T ss_pred HHHHHHHHHHHc-CCCCC--EEEEECHHHHHHHHHHcC
Confidence 444567778766 65554 699999999999888864
No 262
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=23.39 E-value=1.2e+02 Score=26.33 Aligned_cols=12 Identities=17% Similarity=-0.064 Sum_probs=9.5
Q ss_pred cCCCccEEEEcC
Q psy2108 33 RQKTFTNVIYHL 44 (345)
Q Consensus 33 ~~~~pt~vliHG 44 (345)
-++..++||+||
T Consensus 54 l~~y~~viFvHG 65 (150)
T COG3727 54 LPKYRCVIFVHG 65 (150)
T ss_pred ecCceEEEEEee
Confidence 346678999999
No 263
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=22.80 E-value=1.4e+02 Score=27.78 Aligned_cols=23 Identities=26% Similarity=0.138 Sum_probs=17.4
Q ss_pred CCCEEEEEecHHHHHHHHHHHHc
Q psy2108 107 EPDMHLIGFSLGAHVAAYTSKYL 129 (345)
Q Consensus 107 ~~~vhLIGHSLGAhVAg~ag~~~ 129 (345)
.+--.++|||+|=..|..++..+
T Consensus 82 i~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred CCCCEEeecCHHHHHHHHHhCCC
Confidence 34457999999998888776443
No 264
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=22.18 E-value=1.7e+02 Score=27.30 Aligned_cols=35 Identities=26% Similarity=0.167 Sum_probs=25.4
Q ss_pred HHHHHHHHHHhhcCCCCCCE-EEEEecHHHHHHHHHHHH
Q psy2108 91 CVAQMIKRLSKYIGDVEPDM-HLIGFSLGAHVAAYTSKY 128 (345)
Q Consensus 91 ~la~~i~~L~~~~g~~~~~v-hLIGHSLGAhVAg~ag~~ 128 (345)
.-+.+++.|.+. |+. ++ .++|-|.||.+|..++..
T Consensus 12 ~~~Gvl~al~e~-~~~--~fd~i~GtSaGAi~a~~~~~g 47 (266)
T cd07208 12 YTAGVLDAFLEA-GIR--PFDLVIGVSAGALNAASYLSG 47 (266)
T ss_pred HHHHHHHHHHHc-CCC--CCCEEEEECHHHHhHHHHHhC
Confidence 445667888765 433 34 789999999999877654
No 265
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=21.90 E-value=3.6e+02 Score=24.79 Aligned_cols=38 Identities=13% Similarity=0.119 Sum_probs=25.7
Q ss_pred ccCCCccEEEEcCCCCCh-HHHHHH---HhhcCCeEEEEEcC
Q psy2108 32 IRQKTFTNVIYHLMSISI-FFISTE---YFKRGDYNVWFVNW 69 (345)
Q Consensus 32 ~~~~~pt~vliHG~~~s~-~~l~~a---~L~~~~~NVI~vDw 69 (345)
....++.+|++-|.+.+- ..++++ .|...++++.++|=
T Consensus 18 ~~~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 18 LKGQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred HhCCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 344667899999998762 223332 35567999999983
No 266
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=21.80 E-value=1.1e+02 Score=26.15 Aligned_cols=26 Identities=12% Similarity=0.137 Sum_probs=17.8
Q ss_pred cCCCccEEEEcCCCCC-----hHHHHHHHhh
Q psy2108 33 RQKTFTNVIYHLMSIS-----IFFISTEYFK 58 (345)
Q Consensus 33 ~~~~pt~vliHG~~~s-----~~~l~~a~L~ 58 (345)
.+++|.++.+|||++. .+.|++++.+
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~ 79 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYK 79 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHh
Confidence 4677878889999865 4456666443
No 267
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=21.25 E-value=2.7e+02 Score=24.48 Aligned_cols=59 Identities=10% Similarity=0.015 Sum_probs=32.7
Q ss_pred CCccEEEEcCCCCC------hHHHHHHHhhcCC--eEEEEEcCCCCcCCCCccccccCHHHHHHHHHHHHHHHHhh
Q psy2108 35 KTFTNVIYHLMSIS------IFFISTEYFKRGD--YNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQMIKRLSKY 102 (345)
Q Consensus 35 ~~pt~vliHG~~~s------~~~l~~a~L~~~~--~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~~i~~L~~~ 102 (345)
.+++++++||.... ...+.+++. +.+ ..++...-.+|+-. -+ ...-+...++++||.+.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~-~~g~~~~~~~~p~~gH~~~--~~------~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALR-KAGKPVELLIFPGEGHGFG--NP------ENRRDWYERILDFFDKY 209 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHH-HTTSSEEEEEETT-SSSTT--SH------HHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHH-hcCCCEEEEEcCcCCCCCC--Cc------hhHHHHHHHHHHHHHHH
Confidence 57899999998642 344555544 444 44444444444322 11 11225677778888665
No 268
>PF10664 NdhM: Cyanobacterial and plastid NDH-1 subunit M; InterPro: IPR018922 The NADH dehydrogenase I complex shuttles electrons from an unknown electron donor, via FMN and iron-sulphur (Fe-S) centres, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in plants is believed to be plastoquinone. The NADH dehydrogenase I complex couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. This entry represents subunit M of the NADH dehydrogenase I complex in cyanobacteria and plant chloroplasts []. ; GO: 0016655 oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor, 0055114 oxidation-reduction process
Probab=21.11 E-value=70 Score=26.35 Aligned_cols=37 Identities=24% Similarity=0.398 Sum_probs=27.2
Q ss_pred ccCHHHHHHHHHHHHHHHHhhcCCCC-CCEEEEEecHH
Q psy2108 82 VYNLEQVGKCVAQMIKRLSKYIGDVE-PDMHLIGFSLG 118 (345)
Q Consensus 82 ~~~~~~vg~~la~~i~~L~~~~g~~~-~~vhLIGHSLG 118 (345)
..+.+.+|.++-.||..|.+...++. -+--+.-+|||
T Consensus 65 dYnLRrIGSdLE~~iR~LLq~GeisYNl~~RVlNySMG 102 (108)
T PF10664_consen 65 DYNLRRIGSDLEHFIRSLLQAGEISYNLDSRVLNYSMG 102 (108)
T ss_pred hhhHHHhccHHHHHHHHHHHCCceeeCCCcceeccccC
Confidence 45789999999999999976532222 14567888887
No 269
>COG3675 Predicted lipase [Lipid metabolism]
Probab=20.37 E-value=24 Score=34.54 Aligned_cols=63 Identities=17% Similarity=0.237 Sum_probs=38.7
Q ss_pred CeEEEEEcCCCCcCCCCccccccCHHHHHHHHHH-HHHHHHhhcCCCC-CCEEEEEecHHHHHHHHHHHHcC
Q psy2108 61 DYNVWFVNWPELCRGPCYVISVYNLEQVGKCVAQ-MIKRLSKYIGDVE-PDMHLIGFSLGAHVAAYTSKYLR 130 (345)
Q Consensus 61 ~~NVI~vDw~~~~~s~~Y~~a~~~~~~vg~~la~-~i~~L~~~~g~~~-~~vhLIGHSLGAhVAg~ag~~~~ 130 (345)
+.++=.+|--+..+.+ ..+.+..|..+.+ ..++|.++. +. -.+-++|||.|+.+++..|.++.
T Consensus 133 ~g~~~~ldn~gm~~~~-----sr~~dtlgmtv~~~q~~~lleei--P~~Yrig~tghS~g~aii~vrGtyfe 197 (332)
T COG3675 133 AGFYHLLDNEGMHRQP-----SRNQDTLGMTVIEKQEQTLLEEI--PQGYRIGITGHSSGGAIICVRGTYFE 197 (332)
T ss_pred ccceeeccccccccch-----hhhhhhcCchHHHHHHHHHHHhc--ccceEEEEEeecCCccEEEEeccchh
Confidence 4555567766633332 2344445555543 455555542 33 35789999999999999998553
Done!