BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2110
(622 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BX09|RBBP5_MOUSE Retinoblastoma-binding protein 5 OS=Mus musculus GN=Rbbp5 PE=1 SV=2
Length = 538
Score = 618 bits (1594), Expect = e-176, Method: Compositional matrix adjust.
Identities = 298/448 (66%), Positives = 367/448 (81%), Gaps = 30/448 (6%)
Query: 186 EFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWS 245
E DG LDCIS+A+TC FN+ GTLLAVGCNDGRIV+WDFLTRGIAKIISAH+HPVCS+ WS
Sbjct: 16 EADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVCSLCWS 75
Query: 246 RNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLV 305
R+G+K++SASTDN V WDVL+G+C+Q++RFPSPILKVQ+HPR+ + LVCPM+ A V++
Sbjct: 76 RDGHKLVSASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQNKVLVCPMKSAPVML 135
Query: 306 D-TDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFK----- 359
+D H ++P+D+DSDL++VASFDRRG+++ TGN+KGK+LVL + +L ASF+
Sbjct: 136 TLSDSKHVVLPVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKTDSQDLVASFRVTTGT 195
Query: 360 ASTTAIKSIEFARRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWK 419
++TTAIKSIEFAR+G+C L+NT DR+IRVY+ +E+L G+DG+PEP+QKLQDLVN+T WK
Sbjct: 196 SNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPEPMQKLQDLVNRTPWK 255
Query: 420 KCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISS 479
KCCFSGDGEY+ AGSARQHALYIWEKS+GNLVKILHGT+GELLLDV WHPVRPIIASISS
Sbjct: 256 KCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISS 315
Query: 480 GVVSLWAQNQVENWSAFAPDFKELDENVEYDERESEFDISDEDKS-VAQGSDDQDEELEI 538
GVVS+WAQNQVENWSAFAPDFKELDENVEY+ERESEFDI DEDKS Q D E+ E+
Sbjct: 316 GVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKSEPEQTGADAAEDEEV 375
Query: 539 DVTSVEPVAAFCSSDEEVDDSKVLEFLPIAPDVEDPED---GPGSTSAPVT--------- 586
DVTSV+P+AAFCSSDEE++DSK L +LPIAP+VEDPE+ GP + P +
Sbjct: 376 DVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPPPDAVPSSLMDEGASSE 435
Query: 587 ---------SSPPSKTTKYKSFDIQLEG 605
S PP K K K+ +I+L+G
Sbjct: 436 KKRQSSADGSQPPKK--KPKTTNIELQG 461
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 95/152 (62%), Positives = 118/152 (77%), Gaps = 20/152 (13%)
Query: 1 SDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKAS--------------------RG 40
SDL++VASFDRRG+++ TGN+KGK+LVL + +L AS +G
Sbjct: 151 SDLNVVASFDRRGEYIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKG 210
Query: 41 NCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGS 100
+C L+NT DR+IRVY+ +E+L G+DG+PEP+QKLQDLVN+T WKKCCFSGDGEY+ AGS
Sbjct: 211 SCFLINTADRIIRVYDGREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGS 270
Query: 101 ARQHALYIWEKSVGNLVKILHGTKGELLLDVV 132
ARQHALYIWEKS+GNLVKILHGT+GELLLDV
Sbjct: 271 ARQHALYIWEKSIGNLVKILHGTRGELLLDVA 302
>sp|Q15291|RBBP5_HUMAN Retinoblastoma-binding protein 5 OS=Homo sapiens GN=RBBP5 PE=1 SV=2
Length = 538
Score = 618 bits (1594), Expect = e-176, Method: Compositional matrix adjust.
Identities = 287/400 (71%), Positives = 350/400 (87%), Gaps = 7/400 (1%)
Query: 186 EFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWS 245
E DG LDCIS+A+TC FN+ GTLLAVGCNDGRIV+WDFLTRGIAKIISAH+HPVCS+ WS
Sbjct: 16 EADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVCSLCWS 75
Query: 246 RNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLV 305
R+G+K++SASTDN V WDVL+G+C+Q++RFPSPILKVQ+HPR+ + LVCPM+ A V++
Sbjct: 76 RDGHKLVSASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQNKVLVCPMKSAPVML 135
Query: 306 D-TDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFK----- 359
+D H ++P+D+DSDL++VASFDRRG+++ TGN+KGK+LVL + +L ASF+
Sbjct: 136 TLSDSKHVVLPVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKTDSQDLVASFRVTTGT 195
Query: 360 ASTTAIKSIEFARRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWK 419
++TTAIKSIEFAR+G+C L+NT DR+IRVY+ +E+L G+DG+PEP+QKLQDLVN+T WK
Sbjct: 196 SNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPEPMQKLQDLVNRTPWK 255
Query: 420 KCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISS 479
KCCFSGDGEY+ AGSARQHALYIWEKS+GNLVKILHGT+GELLLDV WHPVRPIIASISS
Sbjct: 256 KCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISS 315
Query: 480 GVVSLWAQNQVENWSAFAPDFKELDENVEYDERESEFDISDEDKS-VAQGSDDQDEELEI 538
GVVS+WAQNQVENWSAFAPDFKELDENVEY+ERESEFDI DEDKS Q D E+ E+
Sbjct: 316 GVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKSEPEQTGADAAEDEEV 375
Query: 539 DVTSVEPVAAFCSSDEEVDDSKVLEFLPIAPDVEDPEDGP 578
DVTSV+P+AAFCSSDEE++DSK L +LPIAP+VEDPE+ P
Sbjct: 376 DVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENP 415
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/152 (62%), Positives = 118/152 (77%), Gaps = 20/152 (13%)
Query: 1 SDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKAS--------------------RG 40
SDL++VASFDRRG+++ TGN+KGK+LVL + +L AS +G
Sbjct: 151 SDLNVVASFDRRGEYIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKG 210
Query: 41 NCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGS 100
+C L+NT DR+IRVY+ +E+L G+DG+PEP+QKLQDLVN+T WKKCCFSGDGEY+ AGS
Sbjct: 211 SCFLINTADRIIRVYDGREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGS 270
Query: 101 ARQHALYIWEKSVGNLVKILHGTKGELLLDVV 132
ARQHALYIWEKS+GNLVKILHGT+GELLLDV
Sbjct: 271 ARQHALYIWEKSIGNLVKILHGTRGELLLDVA 302
>sp|Q09309|YQS1_CAEEL Uncharacterized WD repeat-containing protein F21H12.1
OS=Caenorhabditis elegans GN=F21H12.1 PE=4 SV=3
Length = 454
Score = 297 bits (760), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/393 (41%), Positives = 240/393 (61%), Gaps = 18/393 (4%)
Query: 200 CAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNN 259
C FN+ G+++AVGC DGR++++DF+TR IA+ SAH PV +SWSR+G K++++S DN+
Sbjct: 31 CKFNRWGSIVAVGCTDGRVLIYDFMTRNIARTFSAHCLPVSCLSWSRDGRKLLTSSADNS 90
Query: 260 VCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIV----- 314
+ ++DVL G + RF S + FHPRND+ +V + + Q V
Sbjct: 91 IAMFDVLAGTLLHRIRFNSMVTFAMFHPRNDNKAIVLQVNKQPTVEQFSPRIQTVLANDT 150
Query: 315 PIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTA-IKSIEFARR 373
P D S V S+DR+G++++ G KGK+L+ + L+ A K +T I+ I +
Sbjct: 151 PGSSDESASCV-SYDRKGKYIIAGTGKGKLLIYNAETLKCVAWCKQNTVQQIRQIIVPMK 209
Query: 374 GNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAG 433
++ NT DR+IR Y +++L+ + E K+ D+VNK WK C DG YVC
Sbjct: 210 SRFIITNTQDRVIRTYELEDLLHQ-RGQMVEAKYKVLDMVNKAAWKNVCTDSDGLYVCGA 268
Query: 434 SARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISSGVVSLWAQNQVENW 493
S + H+LYIWE + G+L+KILHG KGE LLDV WHP RPII SI+ G VS+W Q VENW
Sbjct: 269 STKAHSLYIWESNTGSLIKILHGNKGEALLDVQWHPTRPIILSIAQGTVSMWTQAHVENW 328
Query: 494 SAFAPDFKELDENVEYDERESEFDISDEDKSVAQGSDDQDEELE-IDVTSVEPVAAFCSS 552
SAFAP+F+EL+EN +Y E+E+EFD+ DED S QD E + IDV +V P SS
Sbjct: 329 SAFAPEFQELEENEKYIEKENEFDMEDEDADEDMTSKSQDAEDDIIDVVNVRPEDYLASS 388
Query: 553 DEE----VDDSKVLE-----FLPIAPDVEDPED 576
DEE + ++ LE ++P+ D+E+ ++
Sbjct: 389 DEEDCNIMKPARNLESGPLWYIPVPLDIENADN 421
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 80/140 (57%), Gaps = 17/140 (12%)
Query: 8 SFDRRGQHVVTGNSKGKVLVLSCPALELKA----------------SRGNCLLVNTGDRL 51
S+DR+G++++ G KGK+L+ + L+ A + ++ NT DR+
Sbjct: 162 SYDRKGKYIIAGTGKGKLLIYNAETLKCVAWCKQNTVQQIRQIIVPMKSRFIITNTQDRV 221
Query: 52 IRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIWEK 111
IR Y +++L+ + E K+ D+VNK WK C DG YVC S + H+LYIWE
Sbjct: 222 IRTYELEDLLHQ-RGQMVEAKYKVLDMVNKAAWKNVCTDSDGLYVCGASTKAHSLYIWES 280
Query: 112 SVGNLVKILHGTKGELLLDV 131
+ G+L+KILHG KGE LLDV
Sbjct: 281 NTGSLIKILHGNKGEALLDV 300
>sp|O42858|SWD1_SCHPO Set1 complex component swd1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=swd1 PE=3 SV=2
Length = 398
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 192/343 (55%), Gaps = 25/343 (7%)
Query: 197 AVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISAST 256
A + F+ G LA G +G +V+WD T ++++++ H + S+ WS +++AS
Sbjct: 27 ATSIRFSTNGYHLASGLVNGSVVIWDLSTFSVSRVLTGHTRAIQSVCWSSCDRFLLTASR 86
Query: 257 DNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDG---DHQI 313
D +WD+ G + +P+ HP + F+ + + L+ D H+
Sbjct: 87 DWKCILWDLRDGSIVYQVVLSAPVWSASLHPHKINTFVASLLDESPQLIIVDDGIPKHKY 146
Query: 314 VPIDEDSD------------LSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKAS 361
+P + D D +++V+ F G+++++G SKG V+ ++++S + +
Sbjct: 147 LPTNPDIDENYSDRRNRSKHVTLVSFFHPSGEYILSGTSKGWFHVIDASTTKIRSSHRIT 206
Query: 362 TTAIKSIEFARRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKC 421
+ +IK I + L+ N+ DR+IR + Q++ N PE K QD+VN+ W C
Sbjct: 207 SQSIKQIRLSFCKRFLIFNSTDRVIRTVSIQDLDN------PEVEHKFQDVVNRLQWNSC 260
Query: 422 CFSGDGEYVCAGSARQ-HALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASIS-- 478
FS GE+V A + + HA+Y+WE+ +G+LVKIL G K EL+ DV WHPV P +AS+
Sbjct: 261 GFSQTGEFVFATTYQMAHAIYVWERGMGSLVKILEGPKEELV-DVDWHPVFPCVASVGLD 319
Query: 479 SGVVSLWAQNQVENWSAFAPDFKELDENVEYDERESEFDISDE 521
SG + +WA Q E+WSAFAPDF+EL+EN+EY+E E EFDI DE
Sbjct: 320 SGSIYIWAVEQKESWSAFAPDFQELEENIEYEEPEDEFDIHDE 362
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 38/182 (20%)
Query: 3 LSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASR---------------GNCLLVNT 47
+++V+ F G+++++G SKG V+ ++++S L+ N+
Sbjct: 167 VTLVSFFHPSGEYILSGTSKGWFHVIDASTTKIRSSHRITSQSIKQIRLSFCKRFLIFNS 226
Query: 48 GDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQ-HAL 106
DR+IR + Q++ N PE K QD+VN+ W C FS GE+V A + + HA+
Sbjct: 227 TDRVIRTVSIQDLDN------PEVEHKFQDVVNRLQWNSCGFSQTGEFVFATTYQMAHAI 280
Query: 107 YIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIV 166
Y+WE+ +G+LVKIL G K EL+ V++ C++ +VG + G I
Sbjct: 281 YVWERGMGSLVKILEGPKEELV--DVDWHPVFPCVA--------------SVGLDSGSIY 324
Query: 167 LW 168
+W
Sbjct: 325 IW 326
>sp|P39706|SWD1_YEAST COMPASS component SWD1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SWD1 PE=1 SV=1
Length = 426
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 173/354 (48%), Gaps = 47/354 (13%)
Query: 202 FNKRGTLLAVGCNDGRIVLWDFLT-RGI---AKIISAHMHPVCSISWSRNGYKIISASTD 257
F+ G LA+GC +G +V++D T R I ++ AH+ P+ SI+WS +G ++++S D
Sbjct: 34 FSPCGDYLALGCANGALVIYDMDTFRPICVPGNMLGAHVRPITSIAWSPDGRLLLTSSRD 93
Query: 258 NNVCIWDVLT-GECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPI 316
++ +WD+ + ++ RF SPI Q+ L R + + D ++
Sbjct: 94 WSIKLWDLSKPSKPLKEIRFDSPIWGCQW--------LDAKRRLCVATIFEESDAYVIDF 145
Query: 317 DEDSDLSIVASFDRR-----------------GQH---VVTGNSKGKVLVLSCPAL---E 353
D S+++ D + +H ++ G SKG + +L E
Sbjct: 146 SNDPVASLLSKSDEKQLSSTPDHGYVLVCTVHTKHPNIIIVGTSKGWLDFYKFHSLYQTE 205
Query: 354 LKASFKASTTAIKSIEFARRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPI--QKLQD 411
S K +++ IK + ++ G L +N DR IR Y E+ ++ E K QD
Sbjct: 206 CIHSLKITSSNIKHLIVSQNGERLAINCSDRTIRQY---EISIDDENSAVELTLEHKYQD 262
Query: 412 LVNKTMWKKCCFSGD-GEYVCAGS--ARQHALYIWEKSVGNLVKILHGTKGELLLDVVWH 468
++NK W FS + EY+ A + + H LYIWE + G LV++L G + EL+ D+ W
Sbjct: 263 VINKLQWNCILFSNNTAEYLVASTHGSSAHELYIWETTSGTLVRVLEGAEEELI-DINWD 321
Query: 469 PVRPIIAS--ISSGVVSLWAQNQVENWSAFAPDFKELDENVEYDERESEFDISD 520
I S SG V +W+ WSA APDF+E++ENV+Y E+E EFD D
Sbjct: 322 FYSMSIVSNGFESGNVYVWSVVIPPKWSALAPDFEEVEENVDYLEKEDEFDEVD 375
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 37 ASRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPI--QKLQDLVNKTMWKKCCFSGD-G 93
+ G L +N DR IR Y E+ ++ E K QD++NK W FS +
Sbjct: 223 SQNGERLAINCSDRTIRQY---EISIDDENSAVELTLEHKYQDVINKLQWNCILFSNNTA 279
Query: 94 EYVCAGS--ARQHALYIWEKSVGNLVKILHGTKGELL 128
EY+ A + + H LYIWE + G LV++L G + EL+
Sbjct: 280 EYLVASTHGSSAHELYIWETTSGTLVRVLEGAEEELI 316
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 114/506 (22%), Positives = 195/506 (38%), Gaps = 88/506 (17%)
Query: 40 GNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKC-CFSGDGEYVCA 98
G L +GD+ I++++ Q DG LQ L T W +C FS DG + A
Sbjct: 738 GETLASASGDKTIKLWDIQ-------DGTC-----LQTLTGHTDWVRCVAFSPDGNTL-A 784
Query: 99 GSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGAL------------------DC 140
SA H + +W+ S G ++ L G + DG +C
Sbjct: 785 SSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGEC 844
Query: 141 ISLAV-------TCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHP------EF 187
+ + + A++ +L G D I LWD T K + H +
Sbjct: 845 LKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSP 904
Query: 188 DG-ALDCISL------------------------AVTCAFNKRGTLLAVGCNDGRIVLWD 222
DG L C+SL A+ AF+ +LA G ND + LWD
Sbjct: 905 DGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWD 964
Query: 223 FLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQ-KYRFPSPIL 281
+ T + H + I++S + + SASTD++V +W++ TG+C Q +
Sbjct: 965 WQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVY 1024
Query: 282 KVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSK 341
V FHP+ + L + + + E SD + ++ GQ + + ++
Sbjct: 1025 AVVFHPQGK-IIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASAD 1083
Query: 342 GKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLLVNTGDRLIRVYNHQEVLNAGKDG 401
V + C + + + S F+ G + + D+ +++++ Q+ GK
Sbjct: 1084 QSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQ----GK-- 1137
Query: 402 DPEPIQKLQDLVNKTMWK-KCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGE 460
L+ L T W FS DG+ + A ++ + IW+ + G I G
Sbjct: 1138 ------CLKTLTGHTNWVFDIAFSPDGK-ILASASHDQTVRIWDVNTGKCHHICIG-HTH 1189
Query: 461 LLLDVVWHPVRPIIASISS-GVVSLW 485
L+ V + P ++AS S V +W
Sbjct: 1190 LVSSVAFSPDGEVVASGSQDQTVRIW 1215
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 141/343 (41%), Gaps = 27/343 (7%)
Query: 145 VTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNK 204
++ AF+ G LLA D + +W+ + + I H + + V F+
Sbjct: 646 LSAAFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHS--------NWVRFVV---FSP 694
Query: 205 RGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWD 264
G +LA D + LW K ++ H H V S+++ +G + SAS D + +WD
Sbjct: 695 DGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWD 754
Query: 265 VLTGECEQKYRFPSPILK-VQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLS 323
+ G C Q + ++ V F P + + H L D + + +
Sbjct: 755 IQDGTCLQTLTGHTDWVRCVAFSP-DGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWV 813
Query: 324 IVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLLVNTGD 383
+F GQ + +G+ + + + E ++ T ++ SI ++ L+ +GD
Sbjct: 814 RSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGD 873
Query: 384 RLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIW 443
R I++++ Q + I+ L N+ FS DG+ + S Q ++ +W
Sbjct: 874 RTIKLWDCQTHI---------CIKTLHGHTNEVC--SVAFSPDGQTLACVSLDQ-SVRLW 921
Query: 444 EKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISS-GVVSLW 485
G +K +G + L V + P R I+AS S+ V LW
Sbjct: 922 NCRTGQCLKAWYGNT-DWALPVAFSPDRQILASGSNDKTVKLW 963
Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/407 (19%), Positives = 142/407 (34%), Gaps = 68/407 (16%)
Query: 40 GNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAG 99
G L +GDR I+++N+ E ++ N +S D + + +G
Sbjct: 822 GQTLASGSGDRTIKIWNYHT---------GECLKTYIGHTNSVY--SIAYSPDSKILVSG 870
Query: 100 SARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDG-ALDCISL--------------- 143
S + +W+ +K LHG E+ DG L C+SL
Sbjct: 871 SG-DRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCL 929
Query: 144 ---------AVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAH--------MHPE 186
A+ AF+ +LA G ND + LWD+ T + H P+
Sbjct: 930 KAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPD 989
Query: 187 -----------------------FDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDF 223
F L+ F+ +G ++A G D + LW+
Sbjct: 990 SQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNI 1049
Query: 224 LTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKV 283
T K +S H + ++WS +G + SAS D +V +WD TG C R S +
Sbjct: 1050 STGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYS 1109
Query: 284 QFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGK 343
N + C + D + + ++ +F G+ + + +
Sbjct: 1110 AIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQT 1169
Query: 344 VLVLSCPALELKASFKASTTAIKSIEFARRGNCLLVNTGDRLIRVYN 390
V + + T + S+ F+ G + + D+ +R++N
Sbjct: 1170 VRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWN 1216
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 29/187 (15%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
+S DG+ + + SA Q ++ +W+ G V IL G + +
Sbjct: 1070 WSPDGQLLASASADQ-SVRLWDCCTGRCVGILRGHSNRVY-----------------SAI 1111
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTL 208
F+ G ++A D + +WD+ K ++ H + FD AF+ G +
Sbjct: 1112 FSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFD-----------IAFSPDGKI 1160
Query: 209 LAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTG 268
LA +D + +WD T I H H V S+++S +G + S S D V IW+V TG
Sbjct: 1161 LASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTG 1220
Query: 269 ECEQKYR 275
EC Q R
Sbjct: 1221 ECLQILR 1227
Score = 37.0 bits (84), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 57/146 (39%), Gaps = 29/146 (19%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
FS +GE + S Q + IW+ G +K L G + FD A
Sbjct: 1112 FSPNGEIIATCSTDQ-TVKIWDWQQGKCLKTLTGHTNWV------FD-----------IA 1153
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTL 208
F+ G +LA +D + +WD T I H H L + AF+ G +
Sbjct: 1154 FSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTH-----------LVSSVAFSPDGEV 1202
Query: 209 LAVGCNDGRIVLWDFLTRGIAKIISA 234
+A G D + +W+ T +I+ A
Sbjct: 1203 VASGSQDQTVRIWNVKTGECLQILRA 1228
>sp|Q9BQ87|TBL1Y_HUMAN F-box-like/WD repeat-containing protein TBL1Y OS=Homo sapiens
GN=TBL1Y PE=2 SV=1
Length = 522
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 138/336 (41%), Gaps = 32/336 (9%)
Query: 147 CAFNKRGTLLAVGCNDGRIVLWDFLTR---GIAKIISAHMHPEFDGALDCISLAVTCAFN 203
CA+N LLA G D +W+ G +++ H E + + +N
Sbjct: 185 CAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWN 244
Query: 204 KRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIW 263
GTLLA+G DG +W +A + H P+ ++ W++ G ++SA D IW
Sbjct: 245 SDGTLLAMGSYDGFARIWT-ENGNLASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIW 303
Query: 264 DVLTGECEQKYRFPS-PILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDL 322
D TGE +Q++ F S P L V + +N+ F C + DH + ++
Sbjct: 304 DAHTGEAKQQFPFHSAPALDVDW--QNNMTFASCSTDMCIHVCRLGCDHPVKTFQGHTNE 361
Query: 323 SIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNC------ 376
+D G + + + + + S +A + I +I+++ G
Sbjct: 362 VNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNS 421
Query: 377 ---LLVNTGDRLIRVYN-HQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCA 432
L + D +R+++ Q V EP+ + FS DG+Y+ +
Sbjct: 422 SIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSV------------AFSPDGKYLAS 469
Query: 433 GSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWH 468
GS ++ ++IW G+LV GT G + +V W+
Sbjct: 470 GSFDKY-VHIWNTQSGSLVHSYQGTGG--IFEVCWN 502
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 55/142 (38%), Gaps = 2/142 (1%)
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTL 208
++ G LLA +D + +W + AH + A + +
Sbjct: 367 WDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNP--NSSIM 424
Query: 209 LAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTG 268
LA D + LWD + H PV S+++S +G + S S D V IW+ +G
Sbjct: 425 LASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSG 484
Query: 269 ECEQKYRFPSPILKVQFHPRND 290
Y+ I +V ++ R D
Sbjct: 485 SLVHSYQGTGGIFEVCWNARGD 506
Score = 33.5 bits (75), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 12/111 (10%)
Query: 155 LLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGCN 214
+LA D + LWD + H P + + AF+ G LA G
Sbjct: 424 MLASASFDSTVRLWDVEQGVCTHTLMKHQEPVY-----------SVAFSPDGKYLASGSF 472
Query: 215 DGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDV 265
D + +W+ + + + + W+ G K+ ++++D +VC+ D+
Sbjct: 473 DKYVHIWNTQSGSLVHSYQG-TGGIFEVCWNARGDKVGASASDGSVCVLDL 522
Score = 32.7 bits (73), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 62/182 (34%), Gaps = 31/182 (17%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
++ DG + GS A IW ++ GNL L KG +
Sbjct: 243 WNSDGTLLAMGSYDGFA-RIWTEN-GNLASTLGQHKGPIF-----------------ALK 283
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTL 208
+NK+G + D ++WD T + H P D +C+ + +
Sbjct: 284 WNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHV 343
Query: 209 LAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTG 268
+GC+ K H + V +I W +G + S S D + IW +
Sbjct: 344 CRLGCDHP------------VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQD 391
Query: 269 EC 270
C
Sbjct: 392 AC 393
>sp|Q4R8H1|TBL1X_MACFA F-box-like/WD repeat-containing protein TBL1X OS=Macaca
fascicularis GN=TBL1X PE=2 SV=1
Length = 569
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 143/362 (39%), Gaps = 43/362 (11%)
Query: 132 VEFDGALDCISLAVT-----------CAFNKRGTLLAVGCNDGRIVLWDFLTR---GIAK 177
+E DG +D S T CA+N LLA G D +W+ G +
Sbjct: 204 MEIDGEVDIPSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQ 263
Query: 178 IISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMH 237
++ H E + + +N GTLLA G DG +W +A + H
Sbjct: 264 LVLRHCIREGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWT-EDGNLASTLGQHKG 322
Query: 238 PVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPS-PILKVQFHPRNDHMFLVC 296
P+ ++ W+R G I+SA D IWD TGE +Q++ F S P L V + +N+ F C
Sbjct: 323 PIFALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW--QNNMTFASC 380
Query: 297 PMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKA 356
+ D + ++ +D G + + + + + S
Sbjct: 381 STDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIH 440
Query: 357 SFKASTTAIKSIEFARRG--------NCLLVNTG-DRLIRVYN-HQEVLNAGKDGDPEPI 406
+A I +I+++ G N +L + D +R+++ + V EP+
Sbjct: 441 DLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPV 500
Query: 407 QKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVV 466
+ FS DG Y+ +GS + ++IW GNLV GT G + +V
Sbjct: 501 YSV------------AFSPDGRYLASGSFDK-CVHIWNTQSGNLVHSYRGTGG--IFEVC 545
Query: 467 WH 468
W+
Sbjct: 546 WN 547
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 208 LLAVGCNDGRIVLWDFLTRGI-AKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVL 266
+LA D + LWD + RG+ ++ H PV S+++S +G + S S D V IW+
Sbjct: 469 MLASASFDSTVRLWD-IERGVCTHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQ 527
Query: 267 TGECEQKYRFPSPILKVQFHPRND 290
+G YR I +V ++ R D
Sbjct: 528 SGNLVHSYRGTGGIFEVCWNARGD 551
Score = 33.9 bits (76), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 28/119 (23%)
Query: 155 LLAVGCNDGRIVLWDFLTRGI-AKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGC 213
+LA D + LWD + RG+ ++ H P + + AF+ G LA G
Sbjct: 469 MLASASFDSTVRLWD-IERGVCTHTLTKHQEPVY-----------SVAFSPDGRYLASGS 516
Query: 214 NDGRIVLWDFLT-------RGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDV 265
D + +W+ + RG I VC W+ G K+ ++++D +VC+ D+
Sbjct: 517 FDKCVHIWNTQSGNLVHSYRGTGGIFE-----VC---WNARGDKVGASASDGSVCVLDL 567
>sp|Q9BZK7|TBL1R_HUMAN F-box-like/WD repeat-containing protein TBL1XR1 OS=Homo sapiens
GN=TBL1XR1 PE=1 SV=1
Length = 514
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 139/350 (39%), Gaps = 31/350 (8%)
Query: 147 CAFNKRGTLLAVGCNDGRIVLWDFL---TRGIAKIISAHMHPEFDGALDCISLAVTCAFN 203
CA+N LLA G D +W+ T G +++ H E + + +N
Sbjct: 175 CAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWN 234
Query: 204 KRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIW 263
GTLLA G DG +W +A + H P+ ++ W++ G I+SA D IW
Sbjct: 235 SEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIW 293
Query: 264 DVLTGECEQKYRFPS-PILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDL 322
D TGE +Q++ F S P L V + N F C + D I ++
Sbjct: 294 DAHTGEAKQQFPFHSAPALDVDWQSNN--TFASCSTDMCIHVCKLGQDRPIKTFQGHTNE 351
Query: 323 SIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRG-------- 374
+D G + + + + + S +A I +I+++ G
Sbjct: 352 VNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNA 411
Query: 375 NCLLVNTG-DRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAG 433
N +L + D +R+++ + + K Q+ V FS DG Y+ +G
Sbjct: 412 NLMLASASFDSTVRLWDVDRGICI------HTLTKHQEPV-----YSVAFSPDGRYLASG 460
Query: 434 SARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPV-RPIIASISSGVV 482
S + ++IW G LV GT G + +V W+ + AS S G V
Sbjct: 461 SFDK-CVHIWNTQTGALVHSYRGTGG--IFEVCWNAAGDKVGASASDGSV 507
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 90/249 (36%), Gaps = 34/249 (13%)
Query: 18 TGNSKGKVLVLSCPALELKASRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQD 77
TG +K + S PAL++ N + D I V K G PI+ Q
Sbjct: 297 TGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVC---------KLGQDRPIKTFQG 347
Query: 78 LVNKTMWKKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGA 137
N+ K +G+ + A + L IW N V L E+
Sbjct: 348 HTNEVNAIKWDPTGN---LLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIY--------T 396
Query: 138 LDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIA-KIISAHMHPEFDGALDCISL 196
+ +LA D + LWD + RGI ++ H P +
Sbjct: 397 IKWSPTGPGTNNPNANLMLASASFDSTVRLWD-VDRGICIHTLTKHQEPVY--------- 446
Query: 197 AVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISAST 256
+ AF+ G LA G D + +W+ T + + + W+ G K+ ++++
Sbjct: 447 --SVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASAS 503
Query: 257 DNNVCIWDV 265
D +VC+ D+
Sbjct: 504 DGSVCVLDL 512
>sp|O60907|TBL1X_HUMAN F-box-like/WD repeat-containing protein TBL1X OS=Homo sapiens
GN=TBL1X PE=1 SV=3
Length = 577
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 136/336 (40%), Gaps = 32/336 (9%)
Query: 147 CAFNKRGTLLAVGCNDGRIVLWDFLTR---GIAKIISAHMHPEFDGALDCISLAVTCAFN 203
CA+N LLA G D +W+ G +++ H E + + +N
Sbjct: 238 CAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWN 297
Query: 204 KRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIW 263
GTLLA G DG +W +A + H P+ ++ W+R G I+SA D IW
Sbjct: 298 TNGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIW 356
Query: 264 DVLTGECEQKYRFPS-PILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDL 322
D TGE +Q++ F S P L V + +N+ F C + D + ++
Sbjct: 357 DAHTGEAKQQFPFHSAPALDVDW--QNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNE 414
Query: 323 SIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRG-------- 374
+D G + + + + + S +A I +I+++ G
Sbjct: 415 VNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNS 474
Query: 375 NCLLVNTG-DRLIRVYN-HQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCA 432
N +L + D +R+++ + V EP+ + FS DG+Y+ +
Sbjct: 475 NIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSV------------AFSPDGKYLAS 522
Query: 433 GSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWH 468
GS + ++IW GNLV GT G + +V W+
Sbjct: 523 GSFDK-CVHIWNTQSGNLVHSYRGTGG--IFEVCWN 555
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 208 LLAVGCNDGRIVLWDFLTRGI-AKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVL 266
+LA D + LWD + RG+ ++ H PV S+++S +G + S S D V IW+
Sbjct: 477 MLASASFDSTVRLWD-IERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQ 535
Query: 267 TGECEQKYRFPSPILKVQFHPRND 290
+G YR I +V ++ R D
Sbjct: 536 SGNLVHSYRGTGGIFEVCWNARGD 559
Score = 34.3 bits (77), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 28/119 (23%)
Query: 155 LLAVGCNDGRIVLWDFLTRGI-AKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGC 213
+LA D + LWD + RG+ ++ H P + + AF+ G LA G
Sbjct: 477 MLASASFDSTVRLWD-IERGVCTHTLTKHQEPVY-----------SVAFSPDGKYLASGS 524
Query: 214 NDGRIVLWDFLT-------RGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDV 265
D + +W+ + RG I VC W+ G K+ ++++D +VC+ D+
Sbjct: 525 FDKCVHIWNTQSGNLVHSYRGTGGIFE-----VC---WNARGDKVGASASDGSVCVLDL 575
>sp|Q8BHJ5|TBL1R_MOUSE F-box-like/WD repeat-containing protein TBL1XR1 OS=Mus musculus
GN=Tbl1xr1 PE=2 SV=1
Length = 514
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 139/350 (39%), Gaps = 31/350 (8%)
Query: 147 CAFNKRGTLLAVGCNDGRIVLWDFL---TRGIAKIISAHMHPEFDGALDCISLAVTCAFN 203
CA+N LLA G D +W+ T G +++ H E + + +N
Sbjct: 175 CAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWN 234
Query: 204 KRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIW 263
GTLLA G DG +W +A + H P+ ++ W++ G I+SA D IW
Sbjct: 235 SEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIW 293
Query: 264 DVLTGECEQKYRFPS-PILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDL 322
D TGE +Q++ F S P L V + N F C + D I ++
Sbjct: 294 DAHTGEAKQQFPFHSAPALDVDWQSNN--TFASCSTDMCIHVCKLGQDRPIKTFQGHTNE 351
Query: 323 SIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRG-------- 374
+D G + + + + + S +A I +I+++ G
Sbjct: 352 VNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNA 411
Query: 375 NCLLVNTG-DRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAG 433
N +L + D +R+++ + + K Q+ V FS DG Y+ +G
Sbjct: 412 NLMLASASFDSTVRLWDVDRGICI------HTLTKHQEPV-----YSVAFSPDGRYLASG 460
Query: 434 SARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPV-RPIIASISSGVV 482
S + ++IW G LV GT G + +V W+ + AS S G V
Sbjct: 461 SFDK-CVHIWNTQTGALVHSYRGTGG--IFEVCWNAAGDKVGASASDGSV 507
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 90/249 (36%), Gaps = 34/249 (13%)
Query: 18 TGNSKGKVLVLSCPALELKASRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQD 77
TG +K + S PAL++ N + D I V K G PI+ Q
Sbjct: 297 TGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVC---------KLGQDRPIKTFQG 347
Query: 78 LVNKTMWKKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGA 137
N+ K +G+ + A + L IW N V L E+
Sbjct: 348 HTNEVNAIKWDPTGN---LLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIY--------T 396
Query: 138 LDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIA-KIISAHMHPEFDGALDCISL 196
+ +LA D + LWD + RGI ++ H P +
Sbjct: 397 IKWSPTGPGTNNPNANLMLASASFDSTVRLWD-VDRGICIHTLTKHQEPVY--------- 446
Query: 197 AVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISAST 256
+ AF+ G LA G D + +W+ T + + + W+ G K+ ++++
Sbjct: 447 --SVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASAS 503
Query: 257 DNNVCIWDV 265
D +VC+ D+
Sbjct: 504 DGSVCVLDL 512
>sp|Q7SZM9|TB1RA_XENLA F-box-like/WD repeat-containing protein TBL1XR1-A OS=Xenopus laevis
GN=tbl1xr1-a PE=1 SV=1
Length = 519
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 139/350 (39%), Gaps = 31/350 (8%)
Query: 147 CAFNKRGTLLAVGCNDGRIVLWDFL---TRGIAKIISAHMHPEFDGALDCISLAVTCAFN 203
CA+N LLA G D +W+ T G +++ H E + + +N
Sbjct: 180 CAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWN 239
Query: 204 KRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIW 263
GTLLA G DG +W +A + H P+ ++ W++ G I+SA D IW
Sbjct: 240 SEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIW 298
Query: 264 DVLTGECEQKYRFPS-PILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDL 322
D TGE +Q++ F S P L V + N F C + D I ++
Sbjct: 299 DAHTGEAKQQFPFHSAPALDVDWQSNN--TFASCSTDMCIHVCKLGQDRPIKTFQGHTNE 356
Query: 323 SIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRG-------- 374
+D G + + + + + S +A I +I+++ G
Sbjct: 357 VNAIKWDPTGNLLASCSDDMTLKIWSMKHDTCVHDLQAHNKEIYTIKWSPTGPGTNNPNA 416
Query: 375 NCLLVNTG-DRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAG 433
N +L + D +R+++ + + K Q+ V FS DG Y+ +G
Sbjct: 417 NLMLASASFDSTVRLWDVDRGICI------HTLTKHQEPV-----YSVAFSPDGRYLASG 465
Query: 434 SARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPV-RPIIASISSGVV 482
S + ++IW G LV GT G + +V W+ + AS S G V
Sbjct: 466 SFDK-CVHIWNTQTGALVHSYRGTGG--IFEVCWNAAGDKVGASASDGSV 512
Score = 36.2 bits (82), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 89/249 (35%), Gaps = 34/249 (13%)
Query: 18 TGNSKGKVLVLSCPALELKASRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQD 77
TG +K + S PAL++ N + D I V K G PI+ Q
Sbjct: 302 TGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVC---------KLGQDRPIKTFQG 352
Query: 78 LVNKTMWKKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGA 137
N+ K +G+ + A + L IW V L E+
Sbjct: 353 HTNEVNAIKWDPTGN---LLASCSDDMTLKIWSMKHDTCVHDLQAHNKEIY--------T 401
Query: 138 LDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIA-KIISAHMHPEFDGALDCISL 196
+ +LA D + LWD + RGI ++ H P +
Sbjct: 402 IKWSPTGPGTNNPNANLMLASASFDSTVRLWD-VDRGICIHTLTKHQEPVY--------- 451
Query: 197 AVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISAST 256
+ AF+ G LA G D + +W+ T + + + W+ G K+ ++++
Sbjct: 452 --SVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASAS 508
Query: 257 DNNVCIWDV 265
D +VC+ D+
Sbjct: 509 DGSVCVLDL 517
>sp|Q6GPC6|TB1RB_XENLA F-box-like/WD repeat-containing protein TBL1XR1-B OS=Xenopus laevis
GN=tbl1xr1-b PE=2 SV=1
Length = 522
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 139/350 (39%), Gaps = 31/350 (8%)
Query: 147 CAFNKRGTLLAVGCNDGRIVLWDFL---TRGIAKIISAHMHPEFDGALDCISLAVTCAFN 203
CA+N LLA G D +W+ T G +++ H E + + +N
Sbjct: 183 CAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWN 242
Query: 204 KRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIW 263
GTLLA G DG +W +A + H P+ ++ W++ G I+SA D IW
Sbjct: 243 SEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIW 301
Query: 264 DVLTGECEQKYRFPS-PILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDL 322
D TGE +Q++ F S P L V + N F C + D I ++
Sbjct: 302 DAHTGEAKQQFPFHSAPALDVDWQSNN--TFASCSTDMCIHVCKLGQDRPIKTFQGHTNE 359
Query: 323 SIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRG-------- 374
+D G + + + + + S +A I +I+++ G
Sbjct: 360 VNAIKWDPTGNLLASCSDDMTLKIWSMKHDTCVHDLQAHNKEIYTIKWSPTGPGTNNPNA 419
Query: 375 NCLLVNTG-DRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAG 433
N +L + D +R+++ + + K Q+ V FS DG Y+ +G
Sbjct: 420 NLMLASASFDSTVRLWDVDRGICI------HTLTKHQEPV-----YSVAFSPDGRYLASG 468
Query: 434 SARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPV-RPIIASISSGVV 482
S + ++IW G LV GT G + +V W+ + AS S G V
Sbjct: 469 SFDK-CVHIWNTQTGALVHSYRGTGG--IFEVCWNAAGDKVGASASDGSV 515
Score = 36.2 bits (82), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 89/249 (35%), Gaps = 34/249 (13%)
Query: 18 TGNSKGKVLVLSCPALELKASRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQD 77
TG +K + S PAL++ N + D I V K G PI+ Q
Sbjct: 305 TGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVC---------KLGQDRPIKTFQG 355
Query: 78 LVNKTMWKKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGA 137
N+ K +G+ + A + L IW V L E+
Sbjct: 356 HTNEVNAIKWDPTGN---LLASCSDDMTLKIWSMKHDTCVHDLQAHNKEIY--------T 404
Query: 138 LDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIA-KIISAHMHPEFDGALDCISL 196
+ +LA D + LWD + RGI ++ H P +
Sbjct: 405 IKWSPTGPGTNNPNANLMLASASFDSTVRLWD-VDRGICIHTLTKHQEPVY--------- 454
Query: 197 AVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISAST 256
+ AF+ G LA G D + +W+ T + + + W+ G K+ ++++
Sbjct: 455 --SVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASAS 511
Query: 257 DNNVCIWDV 265
D +VC+ D+
Sbjct: 512 DGSVCVLDL 520
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 154/401 (38%), Gaps = 47/401 (11%)
Query: 88 CFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTC 147
FS D E V +GS + + IW+ + G + L G G + +
Sbjct: 890 AFSPDRERVASGSDDK-TIKIWDAASGTCTQTLEGHGGRVQ-----------------SV 931
Query: 148 AFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGT 207
AF+ G +A G +D I +WD + + + H S ++ AF+ G
Sbjct: 932 AFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHG-----------SSVLSVAFSPDGQ 980
Query: 208 LLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLT 267
+A G D I +WD + + + H V S+++S +G ++ S S D + IWD +
Sbjct: 981 RVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTAS 1040
Query: 268 GECEQKYR-FPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVA 326
G C Q + V F P + H + D ++ D
Sbjct: 1041 GTCTQTLEGHGGWVQSVVFSP-DGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSV 1099
Query: 327 SFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLLVNTGDRLI 386
+F GQ V +G+ G + + + + + + S+ F+ G + + D I
Sbjct: 1100 AFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTI 1159
Query: 387 RVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMW-KKCCFSGDGEYVCAGSARQHALYIWEK 445
+++ D Q L W + FS DG+ V +GS+ + + IW+
Sbjct: 1160 KIW------------DAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDK-TIKIWDT 1206
Query: 446 SVGNLVKILHGTKGELLLDVVWHPVRPIIASISS-GVVSLW 485
+ G + L G G + V + P +AS SS + +W
Sbjct: 1207 ASGTCTQTLEG-HGGWVQSVAFSPDGQRVASGSSDNTIKIW 1246
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 114/283 (40%), Gaps = 55/283 (19%)
Query: 88 CFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTC 147
FS DG+ V +GS + IW+ + G + L G G + +
Sbjct: 1100 AFSPDGQRVASGSI-DGTIKIWDAASGTCTQTLEGHGGWVH-----------------SV 1141
Query: 148 AFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGT 207
AF+ G +A G DG I +WD + + + H + AF+ G
Sbjct: 1142 AFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHG-----------GWVQSVAFSPDGQ 1190
Query: 208 LLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLT 267
+A G +D I +WD + + + H V S+++S +G ++ S S+DN + IWD +
Sbjct: 1191 RVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWDTAS 1250
Query: 268 GECEQKYRFPSPILKVQFHPRNDHMF------------------LVCPMRHAAVLVDTDG 309
G C Q S + F N ++ L P+ ++ L
Sbjct: 1251 GTCTQTLNVGSTATCLSFDYTNAYINTNIGRIQIATATMESLNQLSSPVCYSYGLGQ--- 1307
Query: 310 DHQIVPIDEDSDLSI-----VASFDRRGQHVVTGNSKGKVLVL 347
DH+ + + + L + ++F +G+ +V G+ G++++
Sbjct: 1308 DHRWITCNNQNVLWLPPEYHTSAFTMQGRKIVLGSYSGRIIIF 1350
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 139/347 (40%), Gaps = 29/347 (8%)
Query: 142 SLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCA 201
S ++ AF+ G +A G +D I +WD + + + H + + A
Sbjct: 842 SSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVW-----------SVA 890
Query: 202 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVC 261
F+ +A G +D I +WD + + + H V S+++S +G ++ S S D+ +
Sbjct: 891 FSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIK 950
Query: 262 IWDVLTGECEQKYR-FPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGD-HQIVPIDED 319
IWD +G C Q S +L V F P + + + G Q +
Sbjct: 951 IWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGG 1010
Query: 320 SDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLLV 379
S S+ S D GQ V +G+ + + + + + ++S+ F+ G +
Sbjct: 1011 SVWSVAFSPD--GQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVAS 1068
Query: 380 NTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHA 439
+ D I+++ D + + ++W FS DG+ V +GS
Sbjct: 1069 GSDDHTIKIW----------DAVSGTCTQTLEGHGDSVW-SVAFSPDGQRVASGSI-DGT 1116
Query: 440 LYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASIS-SGVVSLW 485
+ IW+ + G + L G G + V + P +AS S G + +W
Sbjct: 1117 IKIWDAASGTCTQTLEG-HGGWVHSVAFSPDGQRVASGSIDGTIKIW 1162
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 159/411 (38%), Gaps = 69/411 (16%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
FS DG+ + +GS Q + +W+ S G +K G S +
Sbjct: 914 FSQDGKMLASGSDDQ-TVRLWDISSGQCLKTFKGHT-----------------SRVRSVV 955
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTL 208
F+ +LA G +D + LWD + I H + AFN G++
Sbjct: 956 FSPNSLMLASGSSDQTVRLWDISSGECLYIFQGH-----------TGWVYSVAFNLDGSM 1004
Query: 209 LAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTG 268
LA G D + LWD + I H V S+ +S +G + S S D V +WD+ +G
Sbjct: 1005 LATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSG 1064
Query: 269 ECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVAS- 327
C + +Q H + P ++ + GD QIV + + S + + +
Sbjct: 1065 NC---------LYTLQGHTSCVRSVVFSP---DGAMLASGGDDQIVRLWDISSGNCLYTL 1112
Query: 328 -----------FDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNC 376
F G + G+S V + + + + + T + ++ F+ G
Sbjct: 1113 QGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGAT 1172
Query: 377 LLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMW-KKCCFSGDGEYVCAGSA 435
L +GD+ +R++ D + L L T W F+ DG + +GS+
Sbjct: 1173 LASGSGDQTVRLW------------DISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSS 1220
Query: 436 RQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISS-GVVSLW 485
Q + +WE + + G + VV++P ++AS SS V LW
Sbjct: 1221 DQ-TVRLWEINSSKCLCTFQG-HTSWVNSVVFNPDGSMLASGSSDKTVRLW 1269
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 176/459 (38%), Gaps = 106/459 (23%)
Query: 38 SRGNCLLVNTG-DRLIR--VYNHQEVLNAGKDGDPEPIQKLQDLVNK---------TMW- 84
S GNCL G +R V++ V A +G + I +L D+ +K T W
Sbjct: 1104 SSGNCLYTLQGYTSWVRFLVFSPNGVTLA--NGSSDQIVRLWDISSKKCLYTLQGHTNWV 1161
Query: 85 KKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGAL------ 138
FS DG + +GS Q + +W+ S + IL G + V DG+
Sbjct: 1162 NAVAFSPDGATLASGSGDQ-TVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSS 1220
Query: 139 ------------DCI-------SLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKII 179
C+ S + FN G++LA G +D + LWD I
Sbjct: 1221 DQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWD--------IS 1272
Query: 180 SAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPV 239
S+ F G + ++ + AFN G++LA G D + LW+ + H V
Sbjct: 1273 SSKCLHTFQGHTNWVN---SVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWV 1329
Query: 240 CSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMR 299
S+++S +G + S S D V +W + +GEC + FL
Sbjct: 1330 SSVTFSPDGTMLASGSDDQTVRLWSISSGECL-------------------YTFLGHTNW 1370
Query: 300 HAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFK 359
+V+ DG +I+AS G+ V + S + + + +
Sbjct: 1371 VGSVIFSPDG-------------AILAS----------GSGDQTVRLWSISSGKCLYTLQ 1407
Query: 360 ASTTAIKSIEFARRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWK 419
+ SI F+ G L + D+ +R++N +++G E + L +N +
Sbjct: 1408 GHNNWVGSIVFSPDGTLLASGSDDQTVRLWN----ISSG-----ECLYTLHGHINSV--R 1456
Query: 420 KCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTK 458
FS DG + +GS + + +W+ G +K L K
Sbjct: 1457 SVAFSSDGLILASGSDDE-TIKLWDVKTGECIKTLKSEK 1494
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 154/391 (39%), Gaps = 75/391 (19%)
Query: 145 VTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNK 204
+T AF+ G L A G + G + W+ T ++++ H S + F++
Sbjct: 868 LTVAFSPDGKLFATGDSGGIVRFWEAATG--KELLTCKGHN---------SWVNSVGFSQ 916
Query: 205 RGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWD 264
G +LA G +D + LWD + K H V S+ +S N + S S+D V +WD
Sbjct: 917 DGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWD 976
Query: 265 VLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSD--- 321
+ +GEC L + F ++ V ++L GD + D S
Sbjct: 977 ISSGEC----------LYI-FQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCF 1025
Query: 322 ------LSIVAS--FDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARR 373
S V S F G + +G+ V + + + + T+ ++S+ F+
Sbjct: 1026 YIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPD 1085
Query: 374 GNCLLVNTGDRLIRVYNHQEVLNAGK-------------------------DGDPEPIQK 408
G L D+++R+++ +++G +G + I +
Sbjct: 1086 GAMLASGGDDQIVRLWD----ISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVR 1141
Query: 409 LQDLVNK---------TMW-KKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTK 458
L D+ +K T W FS DG + +GS Q + +W+ S + IL G
Sbjct: 1142 LWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQ-TVRLWDISSSKCLYILQG-H 1199
Query: 459 GELLLDVVWHPVRPIIASISS-GVVSLWAQN 488
+ VV++P +AS SS V LW N
Sbjct: 1200 TSWVNSVVFNPDGSTLASGSSDQTVRLWEIN 1230
>sp|Q9QXE7|TBL1X_MOUSE F-box-like/WD repeat-containing protein TBL1X OS=Mus musculus
GN=Tbl1x PE=2 SV=2
Length = 527
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 138/335 (41%), Gaps = 30/335 (8%)
Query: 147 CAFNKRGTLLAVGCNDGRIVLWDFLTR---GIAKIISAHMHPEFDGALDCISLAVTCAFN 203
CA+N LLA G D +W+ G +++ H E + + +N
Sbjct: 188 CAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWN 247
Query: 204 KRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIW 263
GTLLA G DG +W +A + H P+ ++ W++ G I+SA D IW
Sbjct: 248 SDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIW 306
Query: 264 DVLTGECEQKYRFPS-PILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDL 322
D TGE +Q++ F S P L V + +N+ F C + D + ++
Sbjct: 307 DAHTGEAKQQFPFHSAPALDVDW--QNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNE 364
Query: 323 SIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRG-------- 374
+D G + + + + + S +A + I +I+++ G
Sbjct: 365 VNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNS 424
Query: 375 NCLLVNTG-DRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAG 433
N +L + D +R+++ + + + K Q+ V FS DG+Y+ +G
Sbjct: 425 NIMLASASFDSTVRLWDVERGVCI------HTLTKHQEPV-----YSVAFSPDGKYLASG 473
Query: 434 SARQHALYIWEKSVGNLVKILHGTKGELLLDVVWH 468
S + ++IW G+LV GT G + +V W+
Sbjct: 474 SFDK-CVHIWNTQSGSLVHSYRGTGG--IFEVCWN 505
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 4/143 (2%)
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTL 208
++ G LLA +D + +W + AH + A + +
Sbjct: 370 WDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNP--NSNIM 427
Query: 209 LAVGCNDGRIVLWDFLTRGIA-KIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLT 267
LA D + LWD + RG+ ++ H PV S+++S +G + S S D V IW+ +
Sbjct: 428 LASASFDSTVRLWD-VERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQS 486
Query: 268 GECEQKYRFPSPILKVQFHPRND 290
G YR I +V ++ R D
Sbjct: 487 GSLVHSYRGTGGIFEVCWNARGD 509
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 108/304 (35%), Gaps = 41/304 (13%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
++ DG + GS A IW + GNL L KG +
Sbjct: 246 WNSDGTLLATGSYDGFA-RIWTED-GNLASTLGQHKGPIF-----------------ALK 286
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTL 208
+NK+G + D ++WD T + H P D + +C+ + +
Sbjct: 287 WNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHV 346
Query: 209 LAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDV--- 265
+GC+ R V K H + V +I W +G + S S D + IW +
Sbjct: 347 CRLGCD--RPV----------KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQD 394
Query: 266 -----LTGECEQKYRFP-SPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDED 319
L ++ Y SP +P ++ M L D + I + +
Sbjct: 395 ACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKH 454
Query: 320 SDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLLV 379
+ +F G+++ +G+ V + + + L S++ T I + + RG+ +
Sbjct: 455 QEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGA 513
Query: 380 NTGD 383
+ D
Sbjct: 514 SASD 517
Score = 33.1 bits (74), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 14/112 (12%)
Query: 155 LLAVGCNDGRIVLWDFLTRGIA-KIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGC 213
+LA D + LWD + RG+ ++ H P + + AF+ G LA G
Sbjct: 427 MLASASFDSTVRLWD-VERGVCIHTLTKHQEPVY-----------SVAFSPDGKYLASGS 474
Query: 214 NDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDV 265
D + +W+ + + + + W+ G K+ ++++D +VC+ D+
Sbjct: 475 FDKCVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDL 525
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 177/458 (38%), Gaps = 87/458 (18%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
FS DG+ + + S+ H++ +W+ + G L+ L G + +T
Sbjct: 1163 FSPDGKNLASASS-DHSIKLWDTTSGQLLMTLTGHSAGV-----------------ITVR 1204
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTL 208
F+ G +A G D + LW + K ++ H D ++ + +F+ G
Sbjct: 1205 FSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQ--------DWVN---SLSFSPDGKT 1253
Query: 209 LAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTG 268
LA D I LW + K + H V +++S +G I SAS DN + +W+
Sbjct: 1254 LASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWNRHGI 1313
Query: 269 ECEQKYRFPSPILKVQFHPRND--------------HMFLVCPMRHAAVLVDTDGDHQIV 314
E E + V F P ++ L+ P+ A G+ +
Sbjct: 1314 ELETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLWQRPLISPLEVLA------GNSGVY 1367
Query: 315 PIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRG 374
+ D SI+A+ G ++ +S+ L+ + P AI I F +G
Sbjct: 1368 AVSFLHDGSIIATAGADG-NIQLWHSQDGSLLKTLPG----------NKAIYGISFTPQG 1416
Query: 375 NCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGS 434
+ + D+ ++++ + D + ++ L N+ K FS DG+ A +
Sbjct: 1417 DLIASANADKTVKIWRVR---------DGKALKTLIGHDNEV--NKVNFSPDGK-TLASA 1464
Query: 435 ARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISSGVVSLWAQNQVENWS 494
+R + + +W S G K L G E+ V + P IIAS S A + W
Sbjct: 1465 SRDNTVKLWNVSDGKFKKTLKGHTDEVFW-VSFSPDGKIIASAS-------ADKTIRLWD 1516
Query: 495 AFA-------PDFKELDENVEYDERESEFDISDEDKSV 525
+F+ P +L +V ++ S + DK+V
Sbjct: 1517 SFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTV 1554
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/422 (19%), Positives = 164/422 (38%), Gaps = 55/422 (13%)
Query: 145 VTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNK 204
++ + ++ G +A G D I LW R + +G D + + +F+
Sbjct: 1076 ISISISRDGQTIASGSLDKTIKLWSRDGR---------LFRTLNGHEDAV---YSVSFSP 1123
Query: 205 RGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWD 264
G +A G +D I LW + K I+ H V ++ +S +G + SAS+D+++ +WD
Sbjct: 1124 DGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWD 1183
Query: 265 VLTGECEQKYRFPSP-ILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLS 323
+G+ S ++ V+F P + + + DG + ++ D
Sbjct: 1184 TTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGK-LLKTLNGHQDWV 1242
Query: 324 IVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLLVNTGD 383
SF G+ + + ++ + + +L + K ++ + F+ G + + D
Sbjct: 1243 NSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRD 1302
Query: 384 RLIRVYNHQEV---LNAGKDGDPEPIQKLQD--------LVNKT-MWKK----------- 420
I+++N + G G + L D L N +W++
Sbjct: 1303 NTIKLWNRHGIELETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLWQRPLISPLEVLAG 1362
Query: 421 ------CCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPII 474
F DG + A + + +W G+L+K L G K + + + P +I
Sbjct: 1363 NSGVYAVSFLHDGSIIATAGADGN-IQLWHSQDGSLLKTLPGNKA--IYGISFTPQGDLI 1419
Query: 475 ASISSGVVSLWAQNQVENWSAFAPDFKELDENVEYDERESEFDISDEDKSVAQGSDDQDE 534
AS + A V+ W D K L + +D ++ + S + K++A S D
Sbjct: 1420 ASAN-------ADKTVKIWR--VRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTV 1470
Query: 535 EL 536
+L
Sbjct: 1471 KL 1472
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 118/321 (36%), Gaps = 37/321 (11%)
Query: 72 IQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDV 131
I L+ L + F DG + A + + +W G+L+K L G K
Sbjct: 1354 ISPLEVLAGNSGVYAVSFLHDGSIIATAGADGN-IQLWHSQDGSLLKTLPGNK------- 1405
Query: 132 VEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGAL 191
A+ IS F +G L+A D + +W K + H D +
Sbjct: 1406 -----AIYGIS------FTPQGDLIASANADKTVKIWRVRDGKALKTLIGH-----DNEV 1449
Query: 192 DCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKI 251
+ ++ F+ G LA D + LW+ K + H V +S+S +G I
Sbjct: 1450 NKVN------FSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKII 1503
Query: 252 ISASTDNNVCIWDVLTGECEQKYRFPSP---ILKVQFHPRNDHMFLVCPMRHAAVLVDTD 308
SAS D + +WD +G + P+ + V F+P + + + D
Sbjct: 1504 ASASADKTIRLWDSFSGNLIKS--LPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHD 1561
Query: 309 GDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSI 368
G H + S++ +SF G+++ + + V + L + + S
Sbjct: 1562 G-HLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQIDG-HLLTTLPQHQAGVMSA 1619
Query: 369 EFARRGNCLLVNTGDRLIRVY 389
F+ G L+ + D +++
Sbjct: 1620 IFSPDGKTLISGSLDTTTKIW 1640
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 93/457 (20%), Positives = 169/457 (36%), Gaps = 75/457 (16%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
FS DG+ + AGS + +W + G L+K L+G + D ++ + +
Sbjct: 1205 FSPDGQTIAAGS-EDKTVKLWHRQDGKLLKTLNGHQ--------------DWVN---SLS 1246
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCA------- 201
F+ G LA D I LW + K + H +D A+ A
Sbjct: 1247 FSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIK 1306
Query: 202 -FNKRG----------------------TLLAVGCNDGRIVLWDFLTRGIAKIISAHMHP 238
+N+ G ++A D I LW ++++ +
Sbjct: 1307 LWNRHGIELETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLWQRPLISPLEVLAGN-SG 1365
Query: 239 VCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPM 298
V ++S+ +G I +A D N+ +W G + I + F P+ D +
Sbjct: 1366 VYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNKAIYGISFTPQGDLIASANAD 1425
Query: 299 RHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASF 358
+ + DG I D++++ V +F G+ + + + V + + + K +
Sbjct: 1426 KTVKIWRVRDGKALKTLIGHDNEVNKV-NFSPDGKTLASASRDNTVKLWNVSDGKFKKTL 1484
Query: 359 KASTTAIKSIEFARRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMW 418
K T + + F+ G + + D+ IR+++ +G P DLV
Sbjct: 1485 KGHTDEVFWVSFSPDGKIIASASADKTIRLWDS----FSGNLIKSLPAHN--DLV----- 1533
Query: 419 KKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASIS 478
F+ DG + + SA + + +W G+L+ G ++ + P IAS S
Sbjct: 1534 YSVNFNPDGSMLASTSADK-TVKLWRSHDGHLLHTFSG-HSNVVYSSSFSPDGRYIASAS 1591
Query: 479 S-GVVSLWA----------QNQVENWSA-FAPDFKEL 503
V +W Q+Q SA F+PD K L
Sbjct: 1592 EDKTVKIWQIDGHLLTTLPQHQAGVMSAIFSPDGKTL 1628
>sp|P91341|PWP2_CAEEL Periodic tryptophan protein 2 homolog OS=Caenorhabditis elegans
GN=F55F8.3 PE=3 SV=2
Length = 910
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 158/382 (41%), Gaps = 81/382 (21%)
Query: 90 SGDGEYVCAGSARQHA-LYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAV-TC 147
SG G+ V +AR H I + N V +LH L+ L + + T
Sbjct: 268 SGSGKSVDVTAARFHKETNILATAFNNGVIVLHEIPSFALVH------NLRVSEMRIQTV 321
Query: 148 AFNKRGTLLAVGCNDG---RIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCA-FN 203
A+N G LA+GC G ++V+W++ + AH SL +T A ++
Sbjct: 322 AWNLTGDWLAIGCGKGSTAQLVVWEWQSESYVMKQQAH------------SLRITTAEYS 369
Query: 204 KRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIW 263
G+L+A G DG++ +W+ + H V ++ W+++G I+SAS D V
Sbjct: 370 PDGSLMATGAEDGKVKIWNSRSSFCTVTFDEHTSGVTAVKWTQSGRAILSASLDGTVRAH 429
Query: 264 DVLTGECEQKYRFPSPILKVQFHPRNDHMFLVC--PMRHAAVLVDTDGDHQIVPIDEDSD 321
D+ ++YR + LVC P + A + VD GD I E +
Sbjct: 430 DL------KRYR--------------NFRTLVCPEPTQLATLAVDKAGDLVIAGAKEVFN 469
Query: 322 LSI------------------VASFDRRGQHVVTGNSKGKV---LVLSCPALELKASFKA 360
+ I ++S D G H+V+G+ + ++ A ++ S +A
Sbjct: 470 IYIWSFETGHLLDILSGHESAISSIDIHGNHIVSGSWDRTIKMWTIVDSQAETVEVSHEA 529
Query: 361 STTAIKSIEFARRGNCLLVNTGDRLIRVYNHQEVLNAGK---DGDPEPIQKLQDLVNKT- 416
++F+ G+ + V T D +I + +E++N G D +P + +D + +
Sbjct: 530 -----LDVKFSPAGDEIAVLTSDGVITFFEAKEMINLGSIDTKLDTDPARGSRDTITRQS 584
Query: 417 -----MWKKCCFSGDGEYVCAG 433
+ + FS DG + AG
Sbjct: 585 AAKTKTFTRIRFSPDGNLLLAG 606
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
Query: 325 VASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLLVNTGDR 384
A + G + TG GKV + + + +F T+ + ++++ + G +L + D
Sbjct: 365 TAEYSPDGSLMATGAEDGKVKIWNSRSSFCTVTFDEHTSGVTAVKWTQSGRAILSASLDG 424
Query: 385 LIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIWE 444
+R ++ + N PEP Q V+K G+ V AG+ +YIW
Sbjct: 425 TVRAHDLKRYRNFRTLVCPEPTQLATLAVDKA----------GDLVIAGAKEVFNIYIWS 474
Query: 445 KSVGNLVKILHG 456
G+L+ IL G
Sbjct: 475 FETGHLLDILSG 486
Score = 34.7 bits (78), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 4 SIVASFDRRGQHVVTG------------NSKGKVLVLSCPALELKAS-RGNCLLVNTGDR 50
S ++S D G H+V+G +S+ + + +S AL++K S G+ + V T D
Sbjct: 489 SAISSIDIHGNHIVSGSWDRTIKMWTIVDSQAETVEVSHEALDVKFSPAGDEIAVLTSDG 548
Query: 51 LIRVYNHQEVLNAGK---DGDPEPIQKLQDLVNKT------MWKKCCFSGDGEYVCAG 99
+I + +E++N G D +P + +D + + + + FS DG + AG
Sbjct: 549 VITFFEAKEMINLGSIDTKLDTDPARGSRDTITRQSAAKTKTFTRIRFSPDGNLLLAG 606
Score = 33.1 bits (74), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 89/237 (37%), Gaps = 44/237 (18%)
Query: 40 GNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAG 99
G +L + D +R ++ + N PEP Q V+K G+ V AG
Sbjct: 414 GRAILSASLDGTVRAHDLKRYRNFRTLVCPEPTQLATLAVDKA----------GDLVIAG 463
Query: 100 SARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCAFNKRGTLLAVG 159
+ +YIW G+L+ IL G + A+ I + G + G
Sbjct: 464 AKEVFNIYIWSFETGHLLDILSG-----------HESAISSIDI--------HGNHIVSG 504
Query: 160 CNDGRIVLWDFLTRGIAKIISAH--MHPEFDGALDCISLAVT---CAFNKRGTLLAVGCN 214
D I +W + + +H + +F A D I++ + F + ++ +G
Sbjct: 505 SWDRTIKMWTIVDSQAETVEVSHEALDVKFSPAGDEIAVLTSDGVITFFEAKEMINLGSI 564
Query: 215 DGRIVL------WDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDV 265
D ++ D +TR A A I +S +G +++ NN C++ V
Sbjct: 565 DTKLDTDPARGSRDTITRQSA----AKTKTFTRIRFSPDGNLLLAGGESNNFCLYSV 617
>sp|C4YFX2|TUP1_CANAW Transcriptional repressor TUP1 OS=Candida albicans (strain WO-1)
GN=TUP1 PE=4 SV=1
Length = 511
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 137/340 (40%), Gaps = 50/340 (14%)
Query: 126 ELLLDVVEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHP 185
+L +D+V +LD S+ F++ G +A GCN V +AK+I +
Sbjct: 187 DLDIDMVH---SLDHSSVVCCVRFSRDGKFIATGCNKTTQVFNVTTGELVAKLIDESSNE 243
Query: 186 EFDG---ALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSI 242
D A + + C F+ G LLA G D I +WD T+ I KI+ H + S+
Sbjct: 244 NKDDNTTASGDLYIRSVC-FSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSL 302
Query: 243 SWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAA 302
+ +G +++S S D +V IWD+ T +C + V P + R
Sbjct: 303 DFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVR 362
Query: 303 VLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKAST 362
V T G +V D +GN G
Sbjct: 363 VWDSTTG-------------FLVERLD-------SGNENG----------------NGHE 386
Query: 363 TAIKSIEFARRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCC 422
++ S+ F+ G + + DR ++++ H E GK D + ++ + +K C
Sbjct: 387 DSVYSVAFSNNGEQIASGSLDRTVKLW-HLE----GK-SDKKSTCEVTYIGHKDFVLSVC 440
Query: 423 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELL 462
+ D EY+ +GS + + W+++ GN + +L G + ++
Sbjct: 441 CTPDNEYILSGS-KDRGVIFWDQASGNPLLMLQGHRNSVI 479
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 129/313 (41%), Gaps = 55/313 (17%)
Query: 87 CC--FSGDGEYVCAGSARQHALYIWEKSVGNLV-KILHGTKGELLLDVVEFDGALDCISL 143
CC FS DG+++ G + ++ + G LV K++ + E D G L S+
Sbjct: 203 CCVRFSRDGKFIATGCNK--TTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSV 260
Query: 144 AVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAH--------MHPEFD----GAL 191
F+ G LLA G D I +WD T+ I KI+ H P+ D G+
Sbjct: 261 C----FSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 316
Query: 192 D-------------CISLAV-----TCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKII- 232
D ++L++ T A + G L+A G D + +WD T + + +
Sbjct: 317 DRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLD 376
Query: 233 ------SAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFH 286
+ H V S+++S NG +I S S D V +W L G+ ++K +V +
Sbjct: 377 SGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWH-LEGKSDKK-----STCEVTYI 430
Query: 287 PRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHV---VTGNSKGK 343
D + VC ++ D ++ D+ S ++ R + V+ NSKG
Sbjct: 431 GHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGT 490
Query: 344 VLVLSCPALELKA 356
+ + + + KA
Sbjct: 491 EGIFATGSGDCKA 503
>sp|P0CY34|TUP1_CANAL Transcriptional repressor TUP1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=TUP1 PE=1 SV=1
Length = 512
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 137/340 (40%), Gaps = 50/340 (14%)
Query: 126 ELLLDVVEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHP 185
+L +D+V +LD S+ F++ G +A GCN V +AK+I +
Sbjct: 188 DLDIDMVH---SLDHSSVVCCVRFSRDGKFIATGCNKTTQVFNVTTGELVAKLIDESSNE 244
Query: 186 EFDG---ALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSI 242
D A + + C F+ G LLA G D I +WD T+ I KI+ H + S+
Sbjct: 245 NKDDNTTASGDLYIRSVC-FSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSL 303
Query: 243 SWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAA 302
+ +G +++S S D +V IWD+ T +C + V P + R
Sbjct: 304 DFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVR 363
Query: 303 VLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKAST 362
V T G +V D +GN G
Sbjct: 364 VWDSTTG-------------FLVERLD-------SGNENG----------------NGHE 387
Query: 363 TAIKSIEFARRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCC 422
++ S+ F+ G + + DR ++++ H E GK D + ++ + +K C
Sbjct: 388 DSVYSVAFSNNGEQIASGSLDRTVKLW-HLE----GK-SDKKSTCEVTYIGHKDFVLSVC 441
Query: 423 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELL 462
+ D EY+ +GS + + W+++ GN + +L G + ++
Sbjct: 442 CTPDNEYILSGS-KDRGVIFWDQASGNPLLMLQGHRNSVI 480
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 129/313 (41%), Gaps = 55/313 (17%)
Query: 87 CC--FSGDGEYVCAGSARQHALYIWEKSVGNLV-KILHGTKGELLLDVVEFDGALDCISL 143
CC FS DG+++ G + ++ + G LV K++ + E D G L S+
Sbjct: 204 CCVRFSRDGKFIATGCNK--TTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSV 261
Query: 144 AVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAH--------MHPEFD----GAL 191
F+ G LLA G D I +WD T+ I KI+ H P+ D G+
Sbjct: 262 C----FSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 192 D-------------CISLAV-----TCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKII- 232
D ++L++ T A + G L+A G D + +WD T + + +
Sbjct: 318 DRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLD 377
Query: 233 ------SAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFH 286
+ H V S+++S NG +I S S D V +W L G+ ++K +V +
Sbjct: 378 SGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWH-LEGKSDKK-----STCEVTYI 431
Query: 287 PRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHV---VTGNSKGK 343
D + VC ++ D ++ D+ S ++ R + V+ NSKG
Sbjct: 432 GHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGT 491
Query: 344 VLVLSCPALELKA 356
+ + + + KA
Sbjct: 492 EGIFATGSGDCKA 504
>sp|Q3Y8L7|WDR69_CHLRE Outer row dynein assembly protein 16 OS=Chlamydomonas reinhardtii
GN=ODA16 PE=1 SV=1
Length = 446
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 108/283 (38%), Gaps = 30/283 (10%)
Query: 108 IWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVL 167
+W+ G L L G + E++ C+S FN + T++A G D L
Sbjct: 163 LWDAYTGQLYYTLKGHQTEIV-----------CLS------FNPQSTIIATGSMDNTAKL 205
Query: 168 WDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRG 227
WD T ++ H + V+ FN G L+ G D LWD T
Sbjct: 206 WDVETGQERATLAGHR-----------AEIVSLGFNTGGDLIVTGSFDHDSRLWDVRTGQ 254
Query: 228 IAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGEC-EQKYRFPSPILKVQFH 286
++S H V S ++ G ++S S D +WDV +G C K +L V F
Sbjct: 255 CVHVLSGHRGEVSSTQFNYAGTLVVSGSIDCTSRLWDVRSGRCLSVKQGHTDEVLDVAFD 314
Query: 287 PRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLV 346
M A + G Q + + ++S VA F+ +G ++T +S +
Sbjct: 315 AAGTKMVSASADGSARLYHTLTGVCQHTLVGHEGEISKVA-FNPQGTRLITASSDKTCRL 373
Query: 347 LSCPALELKASFKASTTAIKSIEFARRGNCLLVNTGDRLIRVY 389
C E + T I S F G+ ++ + D R++
Sbjct: 374 WDCDTGECLQVLEGHTDEIFSCAFNYEGDFIITGSKDNTCRIW 416
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/360 (20%), Positives = 136/360 (37%), Gaps = 44/360 (12%)
Query: 87 CCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVT 146
C F+ G+ GS + +W G V L G K ++
Sbjct: 100 CAFNKSGDRFITGSYDR-TCKVWNTFTGEEVFTLEGHK-----------------NVVYA 141
Query: 147 CAFNK-RGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKR 205
AFN G + G D LWD T + + H + V +FN +
Sbjct: 142 IAFNNPYGDKIVTGSFDKTCKLWDAYTGQLYYTLKGHQ-----------TEIVCLSFNPQ 190
Query: 206 GTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDV 265
T++A G D LWD T ++ H + S+ ++ G I++ S D++ +WDV
Sbjct: 191 STIIATGSMDNTAKLWDVETGQERATLAGHRAEIVSLGFNTGGDLIVTGSFDHDSRLWDV 250
Query: 266 LTGECEQKYR-FPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSI 324
TG+C + QF+ + + + + L D + +D +
Sbjct: 251 RTGQCVHVLSGHRGEVSSTQFNYAGT-LVVSGSIDCTSRLWDVRSGRCLSVKQGHTDEVL 309
Query: 325 VASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLLVNTGDR 384
+FD G +V+ ++ G + + + I + F +G L+ + D+
Sbjct: 310 DVAFDAAGTKMVSASADGSARLYHTLTGVCQHTLVGHEGEISKVAFNPQGTRLITASSDK 369
Query: 385 LIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIWE 444
R+++ + G E +Q L+ ++ C F+ +G+++ GS + + IW+
Sbjct: 370 TCRLWD----CDTG-----ECLQVLEGHTDEIF--SCAFNYEGDFIITGS-KDNTCRIWK 417
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 81/208 (38%), Gaps = 37/208 (17%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGAL------DCIS 142
F+ G+ + GS H +W+ G V +L G +GE+ + G L DC S
Sbjct: 229 FNTGGDLIVTGSF-DHDSRLWDVRTGQCVHVLSGHRGEVSSTQFNYAGTLVVSGSIDCTS 287
Query: 143 ----------LAVT---------CAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHM 183
L+V AF+ GT + DG L+ LT + H
Sbjct: 288 RLWDVRSGRCLSVKQGHTDEVLDVAFDAAGTKMVSASADGSARLYHTLTGVCQHTLVGH- 346
Query: 184 HPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSIS 243
+G + + AFN +GT L +D LWD T +++ H + S +
Sbjct: 347 ----EGEISKV------AFNPQGTRLITASSDKTCRLWDCDTGECLQVLEGHTDEIFSCA 396
Query: 244 WSRNGYKIISASTDNNVCIWDVLTGECE 271
++ G II+ S DN IW LT +
Sbjct: 397 FNYEGDFIITGSKDNTCRIWKALTASSQ 424
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 27/42 (64%)
Query: 228 IAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGE 269
+ K++ AH+ P+ + +++++G + I+ S D +W+ TGE
Sbjct: 86 LFKVLRAHILPLTNCAFNKSGDRFITGSYDRTCKVWNTFTGE 127
>sp|Q55AR8|SNR40_DICDI U5 small nuclear ribonucleoprotein 40 kDa protein OS=Dictyostelium
discoideum GN=snrnp40 PE=3 SV=1
Length = 355
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 120/295 (40%), Gaps = 31/295 (10%)
Query: 199 TCAFNKRGTLLAVGCNDGRIVLWDFLTRGI-AKIISAHMHPVCSISWSRNGYKIISASTD 257
+C FN GT LA G +D I LW+ I ++ H + + WS + +I +A TD
Sbjct: 67 SCKFNSYGTALASGGSDKEIFLWNVYGECINYSVLKGHKGTILELHWSTDSNEIYTACTD 126
Query: 258 NNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPID 317
++ +WD GE ++ R S ++ CP R LV + D + I
Sbjct: 127 KSIGVWDSNKGELIKRIREHSGVVNS-----------CCPARRGPPLVASGSDDRSARIF 175
Query: 318 EDSDLSIVASFDRR-----------GQHVVTGNSKGKVLVLSCPALELKASFKAS-TTAI 365
+ F + ++TG + V E AS I
Sbjct: 176 DTRSKGSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDTI 235
Query: 366 KSIEFARRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSG 425
S ++ G LL N+ D ++++ + A + + + Q+ K + K +S
Sbjct: 236 TSTSVSKDGAYLLSNSMDNSCKIWDIRPY--APPNRNIKTFNGAQNNFEKNLIKS-SWSI 292
Query: 426 DGEYV-CAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISS 479
DG + C S RQ +YIW+ + L L G G + +V +HP PIIAS SS
Sbjct: 293 DGRRIGCGSSDRQ--VYIWDTNTKQLQYCLPGHSG-TVNEVTFHPNEPIIASCSS 344
>sp|Q96DI7|SNR40_HUMAN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens
GN=SNRNP40 PE=1 SV=1
Length = 357
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 124/292 (42%), Gaps = 28/292 (9%)
Query: 200 CAFNKRGTLLAVGCNDGRIVLWDFLTR-GIAKIISAHMHPVCSISWSRNGYKIISASTDN 258
C F+ G+ LA D I+LW+ + H V + ++ +G + SASTD
Sbjct: 72 CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDK 131
Query: 259 NVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCP-----------MRHAAVLVDT 307
V +WD TGE ++ + + + + R LVC +R A +
Sbjct: 132 TVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ-LVCTGSDDGTVKLWDIRKKAAIQTF 190
Query: 308 DGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKS 367
+Q++ + +F+ +++G + V +L + + ++
Sbjct: 191 QNTYQVLAV----------TFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 240
Query: 368 IEFARRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDG 427
+ + G+ LL N D +RV++ + A K+ + Q K + +C +S DG
Sbjct: 241 LSLSSEGSYLLSNAMDNTVRVWDVRPF--APKERCVKIFQGNVHNFEKNLL-RCSWSPDG 297
Query: 428 EYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISS 479
+ AGSA + +Y+W+ + ++ L G G + +V +HP PII S SS
Sbjct: 298 SKIAAGSADRF-VYVWDTTSRRILYKLPGHAGS-INEVAFHPDEPIIISASS 347
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 67/178 (37%), Gaps = 31/178 (17%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
++ DG + + S + + +W+ G VK L G S +C
Sbjct: 117 YNTDGSMLFSASTDK-TVAVWDSETGERVKRLKGH-----------------TSFVNSCY 158
Query: 149 FNKRG-TLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGT 207
+RG L+ G +DG + LWD + + LAVT FN
Sbjct: 159 PARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ----------VLAVT--FNDTSD 206
Query: 208 LLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDV 265
+ G D I +WD + + H V +S S G ++S + DN V +WDV
Sbjct: 207 QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 15/124 (12%)
Query: 148 AFNKRGTLLAVGCNDGRIVLWDFLTRGIA------KIISAHMHPEFDGALDCISLAVTCA 201
+ + G+ L D + +WD R A KI ++H F+ L + C+
Sbjct: 242 SLSSEGSYLLSNAMDNTVRVWD--VRPFAPKERCVKIFQGNVH-NFEKNL------LRCS 292
Query: 202 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVC 261
++ G+ +A G D + +WD +R I + H + +++ + IISAS+D +
Sbjct: 293 WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLY 352
Query: 262 IWDV 265
+ ++
Sbjct: 353 MGEI 356
>sp|Q6PE01|SNR40_MOUSE U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus
GN=Snrnp40 PE=2 SV=1
Length = 358
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 120/281 (42%), Gaps = 6/281 (2%)
Query: 200 CAFNKRGTLLAVGCNDGRIVLWDFLTR-GIAKIISAHMHPVCSISWSRNGYKIISASTDN 258
C F+ G+ LA D I+LW+ + H V + ++ +G + SASTD
Sbjct: 73 CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDK 132
Query: 259 NVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDE 318
V +WD TGE ++ + + + + R + V + V +
Sbjct: 133 TVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ 192
Query: 319 DSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLL 378
++ + +F+ +++G + V +L + + ++ + + G+ LL
Sbjct: 193 NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 252
Query: 379 VNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQH 438
N D +RV++ + A K+ + Q K + +C +S DG + AGSA +
Sbjct: 253 SNAMDNTVRVWDVRPF--APKERCVKIFQGNVHNFEKNLL-RCSWSPDGSKIAAGSADRF 309
Query: 439 ALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISS 479
+Y+W+ + ++ L G G + +V +HP PII S SS
Sbjct: 310 -VYVWDTTSRRVLYKLPGHAGS-INEVAFHPDEPIILSASS 348
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 67/178 (37%), Gaps = 31/178 (17%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
++ DG + + S + + +W+ G VK L G S +C
Sbjct: 118 YNTDGSMLFSASTDK-TVAVWDSETGERVKRLKGH-----------------TSFVNSCY 159
Query: 149 FNKRG-TLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGT 207
+RG L+ G +DG + LWD + + LAVT FN
Sbjct: 160 PARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQ----------VLAVT--FNDTSD 207
Query: 208 LLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDV 265
+ G D I +WD + + H V +S S G ++S + DN V +WDV
Sbjct: 208 QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 33.9 bits (76), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 15/124 (12%)
Query: 148 AFNKRGTLLAVGCNDGRIVLWDFLTRGIA------KIISAHMHPEFDGALDCISLAVTCA 201
+ + G+ L D + +WD R A KI ++H F+ L + C+
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVWD--VRPFAPKERCVKIFQGNVH-NFEKNL------LRCS 293
Query: 202 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVC 261
++ G+ +A G D + +WD +R + + H + +++ + I+SAS+D +
Sbjct: 294 WSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRLY 353
Query: 262 IWDV 265
+ ++
Sbjct: 354 MGEI 357
>sp|Q2HJH6|SNR40_BOVIN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus
GN=SNRNP40 PE=2 SV=1
Length = 358
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 123/292 (42%), Gaps = 28/292 (9%)
Query: 200 CAFNKRGTLLAVGCNDGRIVLWDFLTR-GIAKIISAHMHPVCSISWSRNGYKIISASTDN 258
C F+ G+ LA D I+LW+ + H V + ++ +G + SASTD
Sbjct: 73 CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDK 132
Query: 259 NVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCP-----------MRHAAVLVDT 307
V +WD TGE ++ + + + + R LVC +R A +
Sbjct: 133 TVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ-LVCTGSDDGTVKLWDIRKKAAIQTF 191
Query: 308 DGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKS 367
+Q++ + +F+ +++G + V +L + + ++
Sbjct: 192 QNTYQVLAV----------TFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 368 IEFARRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDG 427
+ + G+ LL N D +RV++ + A K+ Q K + +C +S DG
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDVRPF--APKERCVRIFQGNVHNFEKNLL-RCSWSPDG 298
Query: 428 EYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISS 479
+ AGSA + +Y+W+ + ++ L G G + +V +HP PII S SS
Sbjct: 299 SKIAAGSADRF-VYVWDTTSRRILYKLPGHAGS-INEVAFHPDEPIILSASS 348
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 67/178 (37%), Gaps = 31/178 (17%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
++ DG + + S + + +W+ G VK L G S +C
Sbjct: 118 YNTDGSMLFSASTDK-TVAVWDSETGERVKRLKGH-----------------TSFVNSCY 159
Query: 149 FNKRG-TLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGT 207
+RG L+ G +DG + LWD + + LAVT FN
Sbjct: 160 PARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ----------VLAVT--FNDTSD 207
Query: 208 LLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDV 265
+ G D I +WD + + H V +S S G ++S + DN V +WDV
Sbjct: 208 QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 33.5 bits (75), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 15/124 (12%)
Query: 148 AFNKRGTLLAVGCNDGRIVLWDFLTRGIA------KIISAHMHPEFDGALDCISLAVTCA 201
+ + G+ L D + +WD R A +I ++H F+ L + C+
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVWD--VRPFAPKERCVRIFQGNVH-NFEKNL------LRCS 293
Query: 202 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVC 261
++ G+ +A G D + +WD +R I + H + +++ + I+SAS+D +
Sbjct: 294 WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLY 353
Query: 262 IWDV 265
+ ++
Sbjct: 354 MGEI 357
>sp|Q9UUG8|TUP12_SCHPO Transcriptional repressor tup12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup12 PE=1 SV=2
Length = 598
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 137/339 (40%), Gaps = 40/339 (11%)
Query: 69 PEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELL 128
P +Q L L + ++ FS DG+++ G R A ++ G L+ +L +
Sbjct: 287 PISVQLLHTLEHTSVICYVRFSADGKFLATGCNR--AAMVFNVETGKLITLLQEESSKRE 344
Query: 129 LDVVEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFD 188
D+ + AF+ G LA G D +I +WD + + ++++ H +
Sbjct: 345 GDL-----------YVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIY- 392
Query: 189 GALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNG 248
+LD F+K G L G D + LWD + G K+I V ++ +S +G
Sbjct: 393 -SLD---------FSKDGKTLVSGSGDRTVCLWD-VEAGEQKLILHTDDGVTTVMFSPDG 441
Query: 249 YKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMF------------LVC 296
I + S D + IW EQ + + V F P ++ L C
Sbjct: 442 QFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQC 501
Query: 297 PMRHAAVLVDTDGD-HQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELK 355
A + G Q +D LS+ S D G+ +++G+ + S + +
Sbjct: 502 VSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPD--GKWIISGSKDRTIQFWSPDSPHSQ 559
Query: 356 ASFKASTTAIKSIEFARRGNCLLVNTGDRLIRVYNHQEV 394
+ + ++ S+ + G+C +GD R+++++++
Sbjct: 560 LTLQGHNNSVISVAVSPNGHCFATGSGDLRARIWSYEDL 598
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 290 DHMFLVCPMRHAAVLVDTDGDHQIVPIDEDS-----DLSIVA-SFDRRGQHVVTGNSKGK 343
D FL AA++ + + I + E+S DL + + +F G+++ TG +
Sbjct: 310 DGKFLATGCNRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSPDGKYLATGVEDQQ 369
Query: 344 VLVLSCPALELKASFKASTTAIKSIEFARRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDP 403
+ + + I S++F++ G L+ +GDR + +++ + G+
Sbjct: 370 IRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEA-------GEQ 422
Query: 404 EPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLL 463
+ I D V M FS DG+++ AGS + + IW S G LV+ LHG + E +
Sbjct: 423 KLILHTDDGVTTVM-----FSPDGQFIAAGSLDK-VIRIWTSS-GTLVEQLHGHE-ESVY 474
Query: 464 DVVWHPVRPIIASIS-SGVVSLWAQNQVEN 492
V + P + S S + LW V N
Sbjct: 475 SVAFSPDGKYLVSGSLDNTIKLWELQCVSN 504
>sp|Q09715|TUP11_SCHPO Transcriptional repressor tup11 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup11 PE=1 SV=1
Length = 614
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 123/317 (38%), Gaps = 30/317 (9%)
Query: 138 LDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLA 197
L+ S+ F+ G LA GCN V F + K+ + H D + D
Sbjct: 310 LEHPSVVCCVKFSNNGKYLATGCNQAANV---FDVQTGKKLFTLHEESP-DPSRDL--YV 363
Query: 198 VTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTD 257
T AF+ G L G D +I LWD T+ + + S H + S+ +S NG I+S S D
Sbjct: 364 RTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGD 423
Query: 258 NNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRH-------AAVLVDTDGD 310
+WDV TG+C K + + + P ND V + + LV+
Sbjct: 424 RTARLWDVETGQCILKLEIENGVTAIAISP-NDQFIAVGSLDQIIRVWSVSGTLVERLEG 482
Query: 311 HQ----IVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIK 366
H+ + DS + + S D+ + ++ L P KA++ T +
Sbjct: 483 HKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVL 542
Query: 367 SIEFARRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGD 426
S+ + L + DR ++ ++ L G+ L +K CFS D
Sbjct: 543 SVAVSPDSRWGLSGSKDRSMQFWD----LQTGQS-------YLTCQGHKNSVISVCFSPD 591
Query: 427 GEYVCAGSARQHALYIW 443
G +GS A IW
Sbjct: 592 GRQFASGSGDLRAR-IW 607
>sp|Q95RJ9|EBI_DROME F-box-like/WD repeat-containing protein ebi OS=Drosophila
melanogaster GN=ebi PE=1 SV=2
Length = 700
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 134/335 (40%), Gaps = 31/335 (9%)
Query: 147 CAFNKRGTLLAVGCNDGRIVLWDF--LTRGIAKIISAHMHPEFDGALDCISLAVTCAFNK 204
CA+N LLA G D +WD +++ H + + + +N
Sbjct: 361 CAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVPSNKDVTSLDWNC 420
Query: 205 RGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWD 264
G+LLA G DG +W R +A + H P+ ++ W++ G I+SA D IWD
Sbjct: 421 DGSLLATGSYDGYARIWKTDGR-LASTLGQHKGPIFALKWNKCGNYILSAGVDKTTIIWD 479
Query: 265 VLTGECEQKYRFPS-PILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLS 323
TG+C Q++ F S P L V + + + F C + + I ++
Sbjct: 480 ASTGQCTQQFAFHSAPALDVDW--QTNQAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEV 537
Query: 324 IVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRG--------N 375
+ +GQ + + + + + S +A + I +I+++ G N
Sbjct: 538 NAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTN 597
Query: 376 CLLVNTG-DRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTM-WKKCCFSGDGEYVCAG 433
+L + D +R++ D E + L T FS DG+++ +G
Sbjct: 598 LILASASFDSTVRLW------------DVERGSCIHTLTKHTEPVYSVAFSPDGKHLASG 645
Query: 434 SARQHALYIWEKSVGNLVKILHGTKGELLLDVVWH 468
S + ++IW G LV GT G + +V W+
Sbjct: 646 SFDK-CVHIWSTQTGQLVHSYKGTGG--IFEVCWN 677
Score = 37.0 bits (84), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 100/279 (35%), Gaps = 40/279 (14%)
Query: 92 DGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCAFNK 151
DG + GS +A IW K+ G L L KG + +NK
Sbjct: 421 DGSLLATGSYDGYA-RIW-KTDGRLASTLGQHKGPIF-----------------ALKWNK 461
Query: 152 RGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAV 211
G + D ++WD T + + H P D +C+ ++R + +
Sbjct: 462 CGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTDQRIHVCRL 521
Query: 212 GCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECE 271
G N+ K H + V +I W G + S S D + IW + C
Sbjct: 522 GVNE------------PIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCC 569
Query: 272 QKYRFPSP-ILKVQFHPR-------NDHMFLVCPMRHAAV-LVDTDGDHQIVPIDEDSDL 322
+ S I +++ P N ++ L + V L D + I + + ++
Sbjct: 570 HDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEP 629
Query: 323 SIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKAS 361
+F G+H+ +G+ V + S +L S+K +
Sbjct: 630 VYSVAFSPDGKHLASGSFDKCVHIWSTQTGQLVHSYKGT 668
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo sapiens
GN=TAF5 PE=1 SV=3
Length = 800
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 145 VTCA-FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFN 203
V C F+ +A G D + LWD L +I + H P + F+
Sbjct: 630 VNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGP-----------IHSLTFS 678
Query: 204 KRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIW 263
G LA G DGR++LWD + + H VCS+ +SR+G + S S DN V +W
Sbjct: 679 PNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 738
Query: 264 DVL 266
D +
Sbjct: 739 DAI 741
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 56/134 (41%), Gaps = 29/134 (21%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
F + YV GSA + + +W+ GN V+I G KG + +
Sbjct: 635 FHPNSNYVATGSADR-TVRLWDVLNGNCVRIFTGHKGPIH-----------------SLT 676
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTL 208
F+ G LA G DGR++LWD I M E G D + + F++ G +
Sbjct: 677 FSPNGRFLATGATDGRVLLWD--------IGHGLMVGELKGHTDTV---CSLRFSRDGEI 725
Query: 209 LAVGCNDGRIVLWD 222
LA G D + LWD
Sbjct: 726 LASGSMDNTVRLWD 739
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 75/194 (38%), Gaps = 6/194 (3%)
Query: 200 CAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNN 259
+F+ L DG + LW T H +PV +S GY +S D
Sbjct: 549 ASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRV 608
Query: 260 VCIWDVLTGECEQKYRFPSPILKV---QFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPI 316
+W T + F + V +FHP ++++ R + +G+ +
Sbjct: 609 ARLW--ATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT 666
Query: 317 DEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNC 376
+ + +F G+ + TG + G+VL+ + K T + S+ F+R G
Sbjct: 667 GHKGPIHSL-TFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEI 725
Query: 377 LLVNTGDRLIRVYN 390
L + D +R+++
Sbjct: 726 LASGSMDNTVRLWD 739
Score = 33.1 bits (74), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 64/164 (39%), Gaps = 20/164 (12%)
Query: 326 ASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLLVNTGDRL 385
ASF ++++ + G V + S +K + +F+ G + DR+
Sbjct: 549 ASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRV 608
Query: 386 IRVY--NHQEVLN--AGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALY 441
R++ +H + L AG D VN T F + YV GSA + +
Sbjct: 609 ARLWATDHYQPLRIFAGHLAD----------VNCTR-----FHPNSNYVATGSADR-TVR 652
Query: 442 IWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISSGVVSLW 485
+W+ GN V+I G KG + R + + G V LW
Sbjct: 653 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW 696
>sp|Q498F0|WDR44_XENLA WD repeat-containing protein 44 OS=Xenopus laevis GN=wdr44 PE=2
SV=1
Length = 912
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 39/229 (17%)
Query: 234 AHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMF 293
H + +SWS+N Y ++S+S D V +W + EC ++ + + FHPR+D F
Sbjct: 608 GHTADLLDLSWSKN-YFLLSSSMDKTVRLWHISRRECLCCFQHIDFVTAIAFHPRDDRYF 666
Query: 294 LV-----------CPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKG 342
L P + A+ + DG +++ A+F + G+H V G G
Sbjct: 667 LSGSLDGKLRLWNIPDKKVALWNEIDGQTKLI---------TAANFCQNGKHAVIGTYDG 717
Query: 343 KVLVLSCPALELKASFKASTT--------AIKSIEFARRGNCLLVNTGDRLIRVYNHQEV 394
+ + L+ +T I IE N +LV + D IR+Y+ +++
Sbjct: 718 RCIFYDTEHLKYHTQIHVRSTRGRNRVGRKITGIEPLPGENKILVTSNDSRIRLYDLRDL 777
Query: 395 LNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIW 443
+ K + VN + K FS D Y+ +GS ++ +YIW
Sbjct: 778 SLS---------MKYKGCVNSSSQIKASFSHDFTYIVSGSEDKY-VYIW 816
>sp|Q6P2Y2|WDR69_XENTR Outer row dynein assembly protein 16 homolog OS=Xenopus tropicalis
GN=wdr69 PE=2 SV=1
Length = 415
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 131/338 (38%), Gaps = 41/338 (12%)
Query: 108 IWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVL 167
+W+ + G + L G + ++ ++F+ N G +A G D L
Sbjct: 118 VWDTASGEELHTLEGHRN--VVYAIQFN--------------NPYGDKIATGSFDKTCKL 161
Query: 168 WDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRG 227
W T H + V AFN + TL+A G D LWD +
Sbjct: 162 WSAETGKCYHTFRGHT-----------AEIVCLAFNPQSTLIATGSMDTTAKLWDIQSGE 210
Query: 228 IAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTG-ECEQKYRFPSPILKVQFH 286
A +S H + S+S++ G ++I+ S D+ V +W++ +G I QF+
Sbjct: 211 EALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFN 270
Query: 287 PRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLV 346
+ + M + L D+ + + D + +FD GQ V T ++ G V
Sbjct: 271 -WDCSLIATASMDKSCKLWDSLNGKCVATLTGHEDEVLDVTFDSTGQLVATASADGTARV 329
Query: 347 LSCPALELKASFKASTTAIKSIEFARRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPI 406
S + + A + I I F +GN +L + D+ R++N E +
Sbjct: 330 YSASSRKCLAKLEGHEGEISKICFNAQGNRILTASSDKTSRLWNPH---------TGECL 380
Query: 407 QKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIWE 444
Q L+ ++ C F+ +G + GS + + IW
Sbjct: 381 QVLKGHTDEIF--SCAFNYEGNTIITGS-KDNTCRIWR 415
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 73/184 (39%), Gaps = 29/184 (15%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
F+ G+ + GS H + +WE G + L G +GE+ +
Sbjct: 227 FNTTGDRLITGSF-DHTVSVWEIPSGRRIHTLIGHRGEI-----------------SSAQ 268
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTL 208
FN +L+A D LWD L ++ H D LD F+ G L
Sbjct: 269 FNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHE----DEVLD-------VTFDSTGQL 317
Query: 209 LAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTG 268
+A DG ++ +R + H + I ++ G +I++AS+D +W+ TG
Sbjct: 318 VATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNRILTASSDKTSRLWNPHTG 377
Query: 269 ECEQ 272
EC Q
Sbjct: 378 ECLQ 381
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 125/346 (36%), Gaps = 50/346 (14%)
Query: 175 IAKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISA 234
+ K++ AH+ P AFNK G+ G D +WD + +
Sbjct: 84 LFKVLRAHILP-----------LTNVAFNKSGSSFITGSYDRTCKVWDTASGEELHTLEG 132
Query: 235 HMHPVCSISWSR-NGYKIISASTDNNVCIWDVLTGECEQKYR-FPSPILKVQFHPRNDHM 292
H + V +I ++ G KI + S D +W TG+C +R + I+ + F+P++ +
Sbjct: 133 HRNVVYAIQFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLAFNPQST-L 191
Query: 293 FLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPAL 352
M A L D + + + + I SF+ G ++TG+ V V P+
Sbjct: 192 IATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSG 251
Query: 353 ELKASFKASTTAIKSIEF--------------------ARRGNCLLVNTG--DRLIRVY- 389
+ I S +F + G C+ TG D ++ V
Sbjct: 252 RRIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHEDEVLDVTF 311
Query: 390 --NHQEVLNAGKDGDPEP--------IQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHA 439
Q V A DG + KL+ ++ K CF+ G + S+ + +
Sbjct: 312 DSTGQLVATASADGTARVYSASSRKCLAKLEG--HEGEISKICFNAQGNRILTASSDKTS 369
Query: 440 LYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISSGVVSLW 485
+W G +++L G E+ + II +W
Sbjct: 370 -RLWNPHTGECLQVLKGHTDEIFSCAFNYEGNTIITGSKDNTCRIW 414
>sp|Q5RF51|SNR40_PONAB U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii
GN=SNRNP40 PE=2 SV=1
Length = 357
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 124/292 (42%), Gaps = 28/292 (9%)
Query: 200 CAFNKRGTLLAVGCNDGRIVLWDFLTR-GIAKIISAHMHPVCSISWSRNGYKIISASTDN 258
C F+ G+ LA D I+LW+ G + + V + ++ +G + SASTD
Sbjct: 72 CKFHPNGSTLASAGFDRLILLWNVYGDCGNYATLKGYSGAVMELHYNTDGSMLFSASTDK 131
Query: 259 NVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCP-----------MRHAAVLVDT 307
V +WD TGE ++ + + + + R LVC +R A +
Sbjct: 132 TVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ-LVCTGSDDGTVKLWDIRKKAAIQTF 190
Query: 308 DGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKS 367
+Q++ + +F+ +++G + V +L + + ++
Sbjct: 191 QNTYQVLAV----------TFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 240
Query: 368 IEFARRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDG 427
+ + G+ LL N D +RV++ + A K+ + Q K + +C +S DG
Sbjct: 241 LSLSSEGSYLLSNAMDNTVRVWDVRPF--APKERCVKIFQGNVHNFEKNLL-RCSWSPDG 297
Query: 428 EYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISS 479
+ AGSA ++ +W+ + ++ L G G + +V +HP PII S SS
Sbjct: 298 SKIAAGSA-DRSVCVWDTTSRRILYKLPGHAGS-INEVAFHPDEPIIISASS 347
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 67/178 (37%), Gaps = 31/178 (17%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
++ DG + + S + + +W+ G VK L G S +C
Sbjct: 117 YNTDGSMLFSASTDK-TVAVWDSETGERVKRLKGH-----------------TSFVNSCY 158
Query: 149 FNKRG-TLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGT 207
+RG L+ G +DG + LWD + + LAVT FN
Sbjct: 159 PARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ----------VLAVT--FNDTSD 206
Query: 208 LLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDV 265
+ G D I +WD + + H V +S S G ++S + DN V +WDV
Sbjct: 207 QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 15/124 (12%)
Query: 148 AFNKRGTLLAVGCNDGRIVLWDFLTRGIA------KIISAHMHPEFDGALDCISLAVTCA 201
+ + G+ L D + +WD R A KI ++H F+ L + C+
Sbjct: 242 SLSSEGSYLLSNAMDNTVRVWD--VRPFAPKERCVKIFQGNVH-NFEKNL------LRCS 292
Query: 202 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVC 261
++ G+ +A G D + +WD +R I + H + +++ + IISAS+D +
Sbjct: 293 WSPDGSKIAAGSADRSVCVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLY 352
Query: 262 IWDV 265
+ ++
Sbjct: 353 MGEI 356
>sp|Q9XSC3|WDR44_BOVIN WD repeat-containing protein 44 OS=Bos taurus GN=WDR44 PE=1 SV=1
Length = 912
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 137/350 (39%), Gaps = 46/350 (13%)
Query: 118 KILHGTKGELLLDVVEF--DGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGI 175
K HG KG D ++ D + + + T F+ G LLA D + +W L
Sbjct: 485 KAAHGFKGPYDFDQIKVVQDLSGEHMGAVWTMKFSHCGRLLASAGQDNVVRIW-ALKNAF 543
Query: 176 AKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAV--GCN-DGRIVLWDFLTRGIAKII 232
+ M +G + + +K T V G + D F R K
Sbjct: 544 DYFNNMRMKYNTEGRVSPSPSQESLNSSKSDTDTGVCSGTDEDPDDKNAPFRQRPFCKY- 602
Query: 233 SAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHM 292
H + +SWS+N Y ++S+S D V +W + EC ++ + + FHPR+D
Sbjct: 603 KGHTADLLDLSWSKN-YFLLSSSMDKTVRLWHISRRECLCCFQHIDFVTAIAFHPRDDRY 661
Query: 293 FLV-----------CPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSK 341
FL P + A+ + DG +++ A+F + G++ V G
Sbjct: 662 FLSGSLDGKLRLWNIPDKKVALWNEVDGQTKLI---------TAANFCQNGKYAVIGTYD 712
Query: 342 GKVLVLSCPALELKASFKASTT--------AIKSIEFARRGNCLLVNTGDRLIRVYNHQE 393
G+ + L+ +T I IE N +LV + D IR+Y+ ++
Sbjct: 713 GRCIFYDTEHLKYHTQIHVRSTRGRNKVGRKITGIEPLPGENKILVTSNDSRIRLYDLRD 772
Query: 394 VLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIW 443
+ + K + VN + K FS D Y+ +GS ++ +YIW
Sbjct: 773 LSLS---------MKYKGYVNSSSQIKASFSHDFNYLVSGSEDKY-VYIW 812
>sp|Q6NVE8|WDR44_MOUSE WD repeat-containing protein 44 OS=Mus musculus GN=Wdr44 PE=1 SV=1
Length = 915
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 139/350 (39%), Gaps = 46/350 (13%)
Query: 118 KILHGTKGELLLDVVEF--DGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGI 175
K HG KG D ++ D + + + T F+ G LLA D + +W L
Sbjct: 488 KAAHGFKGPYDFDQIKVVQDLSGEHMGAVWTMKFSHCGRLLASAGQDNIVRIW-ALKNAF 546
Query: 176 AKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAV--GCN-DGRIVLWDFLTRGIAKII 232
+ M +G + + + +K T + V G + D F R K
Sbjct: 547 DYFNNMRMKYNTEGRVSPSPSQESLSSSKSDTDMGVCSGTDEDPDDKNAPFRQRPFCKY- 605
Query: 233 SAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHM 292
H + +SWS+N Y ++S+S D V +W + EC ++ + + FHPR+D
Sbjct: 606 KGHTADLLDLSWSKN-YFLLSSSMDKTVRLWHISRRECLCCFQHIDFVTAIAFHPRDDRY 664
Query: 293 FLV-----------CPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSK 341
FL P + A+ + DG +++ A+F + G++ V G
Sbjct: 665 FLSGSLDGKLRLWNIPDKKVALWNEVDGQTKLI---------TAANFCQNGKYAVIGTYD 715
Query: 342 GKVLVLSCPALELKASFKASTT--------AIKSIEFARRGNCLLVNTGDRLIRVYNHQE 393
G+ + L+ +T I IE N +LV + D IR+Y+ ++
Sbjct: 716 GRCIFYDTEHLKYHTQIHVRSTRGRNKVGRKITGIEPLPGENKILVTSNDSRIRLYDLRD 775
Query: 394 VLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIW 443
+ + K + VN + K FS D Y+ +GS ++ +YIW
Sbjct: 776 LSLS---------MKYKGYVNSSSQIKASFSHDFTYLVSGSEDKY-VYIW 815
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus musculus
GN=Taf5 PE=2 SV=1
Length = 801
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 145 VTCA-FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFN 203
V C ++ +A G D + LWD L +I + H P + F+
Sbjct: 631 VNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGP-----------IHSLTFS 679
Query: 204 KRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIW 263
G LA G DGR++LWD + + H VCS+ +SR+G + S S DN V +W
Sbjct: 680 PNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 739
Query: 264 DVL 266
D +
Sbjct: 740 DAV 742
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 29/134 (21%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
+ + YV GSA + + +W+ GN V+I G KG + +
Sbjct: 636 YHPNSNYVATGSADR-TVRLWDVLNGNCVRIFTGHKGPIH-----------------SLT 677
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTL 208
F+ G LA G DGR++LWD I M E G D + + F++ G +
Sbjct: 678 FSPNGRFLATGATDGRVLLWD--------IGHGLMVGELKGHTDTV---CSLRFSRDGEI 726
Query: 209 LAVGCNDGRIVLWD 222
LA G D + LWD
Sbjct: 727 LASGSMDNTVRLWD 740
Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 75/194 (38%), Gaps = 6/194 (3%)
Query: 200 CAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNN 259
+F+ L DG + LW T H +PV +S GY +S D
Sbjct: 550 ASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRV 609
Query: 260 VCIWDVLTGECEQKYRFPSPILKV---QFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPI 316
+W T + F + V ++HP ++++ R + +G+ +
Sbjct: 610 ARLW--ATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFT 667
Query: 317 DEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNC 376
+ + +F G+ + TG + G+VL+ + K T + S+ F+R G
Sbjct: 668 GHKGPIHSL-TFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEI 726
Query: 377 LLVNTGDRLIRVYN 390
L + D +R+++
Sbjct: 727 LASGSMDNTVRLWD 740
>sp|Q9R037|WDR44_RAT WD repeat-containing protein 44 OS=Rattus norvegicus GN=Wdr44 PE=1
SV=1
Length = 908
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 139/351 (39%), Gaps = 48/351 (13%)
Query: 118 KILHGTKGELLLDVVEF--DGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGI 175
K HG KG D ++ D + + + T F+ G LLA D + +W L
Sbjct: 481 KAAHGFKGPYDFDQIKVVQDLSGEHMGAVWTMKFSHCGRLLASAGQDNIVRIW-ALKNAF 539
Query: 176 AKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGCN----DGRIVLWDFLTRGIAKI 231
+ M +G + + + +K T + V C+ D F R K
Sbjct: 540 DYFNNMRMKYNTEGRVSPSPSQESLSSSKSDTDMGV-CSGTDEDPDDKNAPFRQRPFCKY 598
Query: 232 ISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDH 291
H + +SWS+N Y ++S+S D V +W + EC ++ + + FHPR+D
Sbjct: 599 -KGHTADLLDLSWSKN-YFLLSSSMDKTVRLWHISRRECLCCFQHIDFVTAIAFHPRDDR 656
Query: 292 MFLV-----------CPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNS 340
FL P + A+ + DG +++ A+F + G++ V G
Sbjct: 657 YFLSGSLDGKLRLWNIPDKKVALWNEVDGQTKLI---------TAANFCQNGKYAVIGTY 707
Query: 341 KGKVLVLSCPALELKASFKASTT--------AIKSIEFARRGNCLLVNTGDRLIRVYNHQ 392
G+ + L+ +T I IE N +LV + D IR+Y+ +
Sbjct: 708 DGRCIFYDTEHLKYHTQIHVRSTRGRNKVGRKITGIEPLPGENKILVTSNDSRIRLYDLR 767
Query: 393 EVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIW 443
++ + K + VN + K FS D Y+ +GS ++ +YIW
Sbjct: 768 DLSLS---------MKYKGYVNSSSQIKASFSHDFTYLVSGSEDKY-VYIW 808
>sp|Q5ZME8|SMU1_CHICK WD40 repeat-containing protein SMU1 OS=Gallus gallus GN=SMU1 PE=2
SV=1
Length = 513
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 31/234 (13%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
FS DG+Y+ GS + +W + G + K L K + + + D A+ C+
Sbjct: 222 FSPDGQYLVTGSV-DGFIEVWNFTTGKIRKDL---KYQAQDNFMMMDDAVLCM------C 271
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTC-AFNKRGT 207
F++ +LA G DG+I +W KI S F+ A S VTC +F+K +
Sbjct: 272 FSRDTEMLATGAQDGKIKVW--------KIQSGQCLRRFERAH---SKGVTCLSFSKDSS 320
Query: 208 LLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLT 267
+ D I + + K H V +++++G+ IISAS+D V +W+V T
Sbjct: 321 QILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKVWNVKT 380
Query: 268 GECEQKYRFPSP-------ILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIV 314
EC ++ + V P+N F+VC + V+++ G QIV
Sbjct: 381 TECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQG--QIV 432
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 141/354 (39%), Gaps = 72/354 (20%)
Query: 145 VTCA-FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCA-F 202
V CA F+ G L G DG I +W+F T I K + F D AV C F
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDD----AVLCMCF 272
Query: 203 NKRGTLLAVGCNDGRIVLWDFLT-RGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVC 261
++ +LA G DG+I +W + + + + AH V +S+S++ +I+SAS D +
Sbjct: 273 SRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIR 332
Query: 262 IWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSD 321
I + +G+ +++R S ++E
Sbjct: 333 IHGLKSGKTLKEFRGHSSF-----------------------------------VNE--- 354
Query: 322 LSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKA-------STTAIKSIEFARRG 374
A+F + G ++++ +S G V V + E +FK+ T I +
Sbjct: 355 ----ATFTQDGHYIISASSDGTVKVWNVKTTECSNTFKSLGSTAGTDITVNSVILLPKNP 410
Query: 375 NCLLVNTGDRLIRVYNHQ-EVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYV-CA 432
+V + + N Q +++ + G E D V C S GE++ C
Sbjct: 411 EHFVVCNRSNTVVIMNMQGQIVRSFSSGKREG----GDFVC------CALSPRGEWIYCV 460
Query: 433 GSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISS-GVVSLW 485
G LY + G L + L + + ++ + HP + +IA+ S G++ LW
Sbjct: 461 G--EDFVLYCFSTVTGKLERTLTVHEKD-VIGIAHHPHQNLIATYSEDGLLKLW 511
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 29/181 (16%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
FS DG+++ + SA + + IW G + L G K E + D+ A
Sbjct: 54 FSPDGKWLASASADK-TIKIWGAYDGKFERTLEGHK-EGISDI----------------A 95
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTL 208
+++ L+ +D I +WD + + K + H F +FN + L
Sbjct: 96 WSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFG-----------VSFNPQSNL 144
Query: 209 LAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTG 268
+ G D + +WD T K+ISAH PV + ++R+G ++S S D V IWD TG
Sbjct: 145 IVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTG 204
Query: 269 E 269
+
Sbjct: 205 Q 205
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 131/346 (37%), Gaps = 74/346 (21%)
Query: 136 GALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCIS 195
G L IS + F+ G LA D I +W + + H +G D
Sbjct: 44 GHLKSIS---SVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHK----EGISDI-- 94
Query: 196 LAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISAS 255
A+++ L+ +D I +WD + + K + H V +S++ I+S S
Sbjct: 95 -----AWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGS 149
Query: 256 TDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVP 315
D NV IWDV TGEC +
Sbjct: 150 FDENVRIWDVNTGECTKM------------------------------------------ 167
Query: 316 IDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKAST-TAIKSIEFARRG 374
I SD F+R G VV+G+ G V + +L + + ++F+ G
Sbjct: 168 ISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNG 227
Query: 375 NCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGD----GEYV 430
+L T D +R++++ + + + ++ N+ K C FS G+++
Sbjct: 228 KFVLAGTLDNTLRLWSY--------NNNKKCLKTYTGHKNE---KYCIFSTFSVTCGKWI 276
Query: 431 CAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIAS 476
GS + +YI+ +V+ L G + +++L V HP IIAS
Sbjct: 277 VTGS-EDNLIYIYNLQTREIVQTLAGHE-DVVLTVACHPTENIIAS 320
Score = 38.5 bits (88), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 15/128 (11%)
Query: 350 PALELKASFKASTTAIKSIEFARRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPE-PIQK 408
P LK + K +I S++F+ G L + D+ I+++ DG E ++
Sbjct: 34 PNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIW-------GAYDGKFERTLEG 86
Query: 409 LQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWH 468
++ ++ W S D + +C+ S + + IW+ G +VK L G K E + V ++
Sbjct: 87 HKEGISDIAW-----SQDSKLICSASDDK-TIKIWDVESGKMVKTLKGHK-EYVFGVSFN 139
Query: 469 PVRPIIAS 476
P +I S
Sbjct: 140 PQSNLIVS 147
>sp|Q6NRT3|SMU1_XENLA WD40 repeat-containing protein SMU1 OS=Xenopus laevis GN=smu1 PE=2
SV=1
Length = 513
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 31/234 (13%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
FS DG+Y+ GS + +W + G + K L K + + + D A+ C+
Sbjct: 222 FSPDGQYLVTGSV-DGFIEVWNFTTGKIRKDL---KYQAQDNFMMMDDAVLCM------C 271
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTC-AFNKRGT 207
F++ +LA G DG+I +W KI S F+ A S VTC +F+K +
Sbjct: 272 FSRDTEMLATGAQDGKIKVW--------KIQSGQCLRRFERAH---SKGVTCLSFSKDSS 320
Query: 208 LLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLT 267
+ D I + + K H V +++++G+ IISAS+D V IW++ T
Sbjct: 321 QILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKT 380
Query: 268 GECEQKYRFPSP-------ILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIV 314
EC ++ + V P+N F+VC + V+++ G QIV
Sbjct: 381 TECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQG--QIV 432
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 140/354 (39%), Gaps = 72/354 (20%)
Query: 145 VTCA-FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCA-F 202
V CA F+ G L G DG I +W+F T I K + F D AV C F
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDD----AVLCMCF 272
Query: 203 NKRGTLLAVGCNDGRIVLWDFLT-RGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVC 261
++ +LA G DG+I +W + + + + AH V +S+S++ +I+SAS D +
Sbjct: 273 SRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIR 332
Query: 262 IWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSD 321
I + +G+ +++R S ++E
Sbjct: 333 IHGLKSGKTLKEFRGHSSF-----------------------------------VNE--- 354
Query: 322 LSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKA-------STTAIKSIEFARRG 374
A+F + G ++++ +S G V + + E +FK+ T I +
Sbjct: 355 ----ATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNP 410
Query: 375 NCLLVNTGDRLIRVYNHQ-EVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYV-CA 432
+V + + N Q +++ + G E D V C S GE++ C
Sbjct: 411 EHFVVCNRSNTVVIMNMQGQIVRSFSSGKREG----GDFVC------CTLSPRGEWIYCV 460
Query: 433 GSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISS-GVVSLW 485
G LY + G L + L + + ++ + HP + +I + S G++ LW
Sbjct: 461 G--EDFVLYCFSTVTGKLERTLTVHEKD-VIGIAHHPHQNLIGTYSEDGLLKLW 511
>sp|Q3UKJ7|SMU1_MOUSE WD40 repeat-containing protein SMU1 OS=Mus musculus GN=Smu1 PE=2
SV=2
Length = 513
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 31/234 (13%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
FS DG+Y+ GS + +W + G + K L K + + + D A+ C+
Sbjct: 222 FSPDGQYLVTGSV-DGFIEVWNFTTGKIRKDL---KYQAQDNFMMMDDAVLCM------C 271
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTC-AFNKRGT 207
F++ +LA G DG+I +W KI S F+ A S VTC +F+K +
Sbjct: 272 FSRDTEMLATGAQDGKIKVW--------KIQSGQCLRRFERAH---SKGVTCLSFSKDSS 320
Query: 208 LLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLT 267
+ D I + + K H V +++++G+ IISAS+D V IW++ T
Sbjct: 321 QILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKT 380
Query: 268 GECEQKYRFPSP-------ILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIV 314
EC ++ + V P+N F+VC + V+++ G QIV
Sbjct: 381 TECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQG--QIV 432
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 141/354 (39%), Gaps = 72/354 (20%)
Query: 145 VTCA-FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCA-F 202
V CA F+ G L G DG I +W+F T I K + F D AV C F
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDD----AVLCMCF 272
Query: 203 NKRGTLLAVGCNDGRIVLWDFLT-RGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVC 261
++ +LA G DG+I +W + + + + AH V +S+S++ +I+SAS D +
Sbjct: 273 SRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIR 332
Query: 262 IWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSD 321
I + +G+ +++R S ++E
Sbjct: 333 IHGLKSGKTLKEFRGHSSF-----------------------------------VNE--- 354
Query: 322 LSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKA-------STTAIKSIEFARRG 374
A+F + G ++++ +S G V + + E +FK+ T I +
Sbjct: 355 ----ATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNP 410
Query: 375 NCLLVNTGDRLIRVYNHQ-EVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYV-CA 432
+V + + N Q +++ + G E D V C S GE++ C
Sbjct: 411 EHFVVCNRSNTVVIMNMQGQIVRSFSSGKREG----GDFVC------CALSPRGEWIYCV 460
Query: 433 GSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISS-GVVSLW 485
G LY + G L + L + + ++ + HP + +IA+ S G++ LW
Sbjct: 461 G--EDFVLYCFSTVTGKLERTLTVHEKD-VIGIAHHPHQNLIATYSEDGLLKLW 511
>sp|Q2TAY7|SMU1_HUMAN WD40 repeat-containing protein SMU1 OS=Homo sapiens GN=SMU1 PE=1
SV=2
Length = 513
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 31/234 (13%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
FS DG+Y+ GS + +W + G + K L K + + + D A+ C+
Sbjct: 222 FSPDGQYLVTGSV-DGFIEVWNFTTGKIRKDL---KYQAQDNFMMMDDAVLCM------C 271
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTC-AFNKRGT 207
F++ +LA G DG+I +W KI S F+ A S VTC +F+K +
Sbjct: 272 FSRDTEMLATGAQDGKIKVW--------KIQSGQCLRRFERAH---SKGVTCLSFSKDSS 320
Query: 208 LLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLT 267
+ D I + + K H V +++++G+ IISAS+D V IW++ T
Sbjct: 321 QILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKT 380
Query: 268 GECEQKYRFPSP-------ILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIV 314
EC ++ + V P+N F+VC + V+++ G QIV
Sbjct: 381 TECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQG--QIV 432
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 141/354 (39%), Gaps = 72/354 (20%)
Query: 145 VTCA-FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCA-F 202
V CA F+ G L G DG I +W+F T I K + F D AV C F
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDD----AVLCMCF 272
Query: 203 NKRGTLLAVGCNDGRIVLWDFLT-RGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVC 261
++ +LA G DG+I +W + + + + AH V +S+S++ +I+SAS D +
Sbjct: 273 SRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIR 332
Query: 262 IWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSD 321
I + +G+ +++R S ++E
Sbjct: 333 IHGLKSGKTLKEFRGHSSF-----------------------------------VNE--- 354
Query: 322 LSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKA-------STTAIKSIEFARRG 374
A+F + G ++++ +S G V + + E +FK+ T I +
Sbjct: 355 ----ATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNP 410
Query: 375 NCLLVNTGDRLIRVYNHQ-EVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYV-CA 432
+V + + N Q +++ + G E D V C S GE++ C
Sbjct: 411 EHFVVCNRSNTVVIMNMQGQIVRSFSSGKREG----GDFVC------CALSPRGEWIYCV 460
Query: 433 GSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISS-GVVSLW 485
G LY + G L + L + + ++ + HP + +IA+ S G++ LW
Sbjct: 461 G--EDFVLYCFSTVTGKLERTLTVHEKD-VIGIAHHPHQNLIATYSEDGLLKLW 511
>sp|Q76B40|SMU1_CRIGR WD40 repeat-containing protein SMU1 OS=Cricetulus griseus GN=SMU1
PE=2 SV=1
Length = 513
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 31/234 (13%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
FS DG+Y+ GS + +W + G + K L K + + + D A+ C+
Sbjct: 222 FSPDGQYLVTGSV-DGFIEVWNFTTGKIRKDL---KYQAQDNFMMMDDAVLCM------C 271
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTC-AFNKRGT 207
F++ +LA G DG+I +W KI S F+ A S VTC +F+K +
Sbjct: 272 FSRDTEMLATGAQDGKIKVW--------KIQSGQCLRRFERAH---SKGVTCLSFSKDSS 320
Query: 208 LLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLT 267
+ D I + + K H V +++++G+ IISAS+D V IW++ T
Sbjct: 321 QILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKT 380
Query: 268 GECEQKYRFPSP-------ILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIV 314
EC ++ + V P+N F+VC + V+++ G QIV
Sbjct: 381 TECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQG--QIV 432
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 141/354 (39%), Gaps = 72/354 (20%)
Query: 145 VTCA-FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCA-F 202
V CA F+ G L G DG I +W+F T I K + F D AV C F
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDD----AVLCMCF 272
Query: 203 NKRGTLLAVGCNDGRIVLWDFLT-RGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVC 261
++ +LA G DG+I +W + + + + AH V +S+S++ +I+SAS D +
Sbjct: 273 SRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIR 332
Query: 262 IWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSD 321
I + +G+ +++R S ++E
Sbjct: 333 IHGLKSGKTLKEFRGHSSF-----------------------------------VNE--- 354
Query: 322 LSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKA-------STTAIKSIEFARRG 374
A+F + G ++++ +S G V + + E +FK+ T I +
Sbjct: 355 ----ATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNP 410
Query: 375 NCLLVNTGDRLIRVYNHQ-EVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYV-CA 432
+V + + N Q +++ + G E D V C S GE++ C
Sbjct: 411 EHFVVCNRSNTVVIMNMQGQIVRSFSSGKREG----GDFVC------CALSPRGEWIYCV 460
Query: 433 GSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISS-GVVSLW 485
G LY + G L + L + + ++ + HP + +IA+ S G++ LW
Sbjct: 461 G--EDFVLYCFSTVTGKLERTLTVHEKD-VIGIAHHPHQNLIATYSEDGLLKLW 511
>sp|Q2TBS9|SMU1_BOVIN WD40 repeat-containing protein SMU1 OS=Bos taurus GN=SMU1 PE=2 SV=1
Length = 513
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 31/234 (13%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
FS DG+Y+ GS + +W + G + K L K + + + D A+ C+
Sbjct: 222 FSPDGQYLVTGSV-DGFIEVWNFTTGKIRKDL---KYQAQDNFMMMDDAVLCM------C 271
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTC-AFNKRGT 207
F++ +LA G DG+I +W KI S F+ A S VTC +F+K +
Sbjct: 272 FSRDTEMLATGAQDGKIKVW--------KIQSGQCLRRFERAH---SKGVTCLSFSKDSS 320
Query: 208 LLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLT 267
+ D I + + K H V +++++G+ IISAS+D V IW++ T
Sbjct: 321 QILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKT 380
Query: 268 GECEQKYRFPSP-------ILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIV 314
EC ++ + V P+N F+VC + V+++ G QIV
Sbjct: 381 TECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQG--QIV 432
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 141/354 (39%), Gaps = 72/354 (20%)
Query: 145 VTCA-FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCA-F 202
V CA F+ G L G DG I +W+F T I K + F D AV C F
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDD----AVLCMCF 272
Query: 203 NKRGTLLAVGCNDGRIVLWDFLT-RGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVC 261
++ +LA G DG+I +W + + + + AH V +S+S++ +I+SAS D +
Sbjct: 273 SRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIR 332
Query: 262 IWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSD 321
I + +G+ +++R S ++E
Sbjct: 333 IHGLKSGKTLKEFRGHSSF-----------------------------------VNE--- 354
Query: 322 LSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKA-------STTAIKSIEFARRG 374
A+F + G ++++ +S G V + + E +FK+ T I +
Sbjct: 355 ----ATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNP 410
Query: 375 NCLLVNTGDRLIRVYNHQ-EVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYV-CA 432
+V + + N Q +++ + G E D V C S GE++ C
Sbjct: 411 EHFVVCNRSNTVVIMNMQGQIVRSFSSGKREG----GDFVC------CALSPRGEWIYCV 460
Query: 433 GSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISS-GVVSLW 485
G LY + G L + L + + ++ + HP + +IA+ S G++ LW
Sbjct: 461 G--EDFVLYCFSTVTGKLERTLTVHEKD-VIGIAHHPHQNLIATYSEDGLLKLW 511
>sp|Q5JSH3|WDR44_HUMAN WD repeat-containing protein 44 OS=Homo sapiens GN=WDR44 PE=1 SV=1
Length = 913
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 39/229 (17%)
Query: 234 AHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMF 293
H + +SWS+N Y ++S+S D V +W + EC ++ + + FHPR+D F
Sbjct: 605 GHTADLLDLSWSKN-YFLLSSSMDKTVRLWHISRRECLCCFQHIDFVTAIAFHPRDDRYF 663
Query: 294 LV-----------CPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKG 342
L P + A+ + DG +++ A+F + G++ V G G
Sbjct: 664 LSGSLDGKLRLWNIPDKKVALWNEVDGQTKLI---------TAANFCQNGKYAVIGTYDG 714
Query: 343 KVLVLSCPALELKASFKASTT--------AIKSIEFARRGNCLLVNTGDRLIRVYNHQEV 394
+ + L+ +T I IE N +LV + D IR+Y+ +++
Sbjct: 715 RCIFYDTEHLKYHTQIHVRSTRGRNKVGRKITGIEPLPGENKILVTSNDSRIRLYDLRDL 774
Query: 395 LNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIW 443
+ K + VN + K FS D Y+ +GS ++ +YIW
Sbjct: 775 SLS---------MKYKGYVNSSSQIKASFSHDFTYLVSGSEDKY-VYIW 813
>sp|Q99M63|SMU1_RAT WD40 repeat-containing protein SMU1 OS=Rattus norvegicus GN=Smu1
PE=2 SV=1
Length = 513
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 31/234 (13%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
FS DG+Y+ GS + +W + G + K L K + + + D A+ C+
Sbjct: 222 FSPDGQYLVTGSV-DGFIEVWNFTTGKIRKDL---KYQAQDNFMMMDDAVLCM------C 271
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTC-AFNKRGT 207
F++ +LA G DG+I +W KI S F+ A S VTC +F+K +
Sbjct: 272 FSRDTEMLATGAQDGKIKVW--------KIQSGQCLRRFERAH---SKGVTCLSFSKDSS 320
Query: 208 LLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLT 267
+ D I + + K H V +++++G+ IISAS+D V IW++ T
Sbjct: 321 QILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKT 380
Query: 268 GECEQKYRFPSP-------ILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIV 314
EC ++ + V P+N F+VC + V+++ G QIV
Sbjct: 381 TECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQG--QIV 432
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 141/354 (39%), Gaps = 72/354 (20%)
Query: 145 VTCA-FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCA-F 202
V CA F+ G L G DG I +W+F T I K + F D AV C F
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDD----AVLCMCF 272
Query: 203 NKRGTLLAVGCNDGRIVLWDFLT-RGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVC 261
++ +LA G DG+I +W + + + + AH V +S+S++ +I+SAS D +
Sbjct: 273 SRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIR 332
Query: 262 IWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSD 321
I + +G+ +++R S ++E
Sbjct: 333 IHGLKSGKTLKEFRGHSSF-----------------------------------VNE--- 354
Query: 322 LSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKA-------STTAIKSIEFARRG 374
A+F + G ++++ +S G V + + E +FK+ T I +
Sbjct: 355 ----ATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNP 410
Query: 375 NCLLVNTGDRLIRVYNHQ-EVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYV-CA 432
+V + + N Q +++ + G E D V C S GE++ C
Sbjct: 411 EHFVVCNRSNTVVIMNMQGQIVRSFSSGKREG----GDFVC------CALSPRGEWIYCV 460
Query: 433 GSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISS-GVVSLW 485
G LY + G L + L + + ++ + HP + +IA+ S G++ LW
Sbjct: 461 G--EDFVLYCFSTVTGKLERTLTVHEKD-VIGIAHHPHQNLIATYSEDGLLKLW 511
>sp|Q8N136|WDR69_HUMAN Outer row dynein assembly protein 16 homolog OS=Homo sapiens
GN=WDR69 PE=1 SV=1
Length = 415
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 116/306 (37%), Gaps = 40/306 (13%)
Query: 148 AFNK-RGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRG 206
AFN G +A G D LW T H + C+S FN +
Sbjct: 141 AFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHT-----AEIVCLS------FNPQS 189
Query: 207 TLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWD-- 264
TL+A G D LWD + H + S+S++ +G +II+ S D+ V +WD
Sbjct: 190 TLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDAD 249
Query: 265 ------VLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDE 318
+L G C + I F+ + + L M L D + +
Sbjct: 250 TGRKVNILIGHCAE-------ISSASFN-WDCSLILTGSMDKTCKLWDATNGKCVATLTG 301
Query: 319 DSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLL 378
D + + FD G+ + T ++ G + S + A + I I F +GN LL
Sbjct: 302 HDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLL 361
Query: 379 VNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQH 438
+ D+ R+++ Q + +Q L+ ++ C F+ G V GS + +
Sbjct: 362 TGSSDKTARIWDAQT---------GQCLQVLEGHTDEIF--SCAFNYKGNIVITGS-KDN 409
Query: 439 ALYIWE 444
IW
Sbjct: 410 TCRIWR 415
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 127/324 (39%), Gaps = 52/324 (16%)
Query: 175 IAKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISA 234
+ K++ AH+ P A NK G+ G D LWD + +
Sbjct: 84 LFKVLKAHILP-----------LTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEG 132
Query: 235 HMHPVCSISWSR-NGYKIISASTDNNVCIWDVLTGECEQKYR-FPSPILKVQFHPRNDHM 292
H + V +I+++ G KI + S D +W V TG+C +R + I+ + F+P++ +
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQST-L 191
Query: 293 FLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGN------------- 339
M A L D ++ + S I SF+ G ++TG+
Sbjct: 192 VATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTG 251
Query: 340 SKGKVLVLSCPALELKASFKASTTAIKSIEF--------ARRGNCLLVNTG--DRLIRV- 388
K +L+ C + ASF + I + A G C+ TG D ++
Sbjct: 252 RKVNILIGHCAEIS-SASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSC 310
Query: 389 --YNHQEVLNAGKDGDP--------EPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQH 438
Y + + A DG + I KL+ ++ K F+ G ++ GS+ +
Sbjct: 311 FDYTGKLIATASADGTARIFSAATRKCIAKLEG--HEGEISKISFNPQGNHLLTGSSDKT 368
Query: 439 ALYIWEKSVGNLVKILHGTKGELL 462
A IW+ G +++L G E+
Sbjct: 369 A-RIWDAQTGQCLQVLEGHTDEIF 391
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 69/184 (37%), Gaps = 29/184 (15%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
F+ G+ + GS H + +W+ G V IL G E+ + +
Sbjct: 227 FNTSGDRIITGSF-DHTVVVWDADTGRKVNILIGHCAEI-----------------SSAS 268
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTL 208
FN +L+ G D LWD ++ H D F+ G L
Sbjct: 269 FNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDS-----------CFDYTGKL 317
Query: 209 LAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTG 268
+A DG ++ TR + H + IS++ G +++ S+D IWD TG
Sbjct: 318 IATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTG 377
Query: 269 ECEQ 272
+C Q
Sbjct: 378 QCLQ 381
Score = 35.8 bits (81), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 49/134 (36%), Gaps = 29/134 (21%)
Query: 88 CFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTC 147
CF G+ + SA A I+ + + L G +GE+
Sbjct: 310 CFDYTGKLIATASADGTA-RIFSAATRKCIAKLEGHEGEI-----------------SKI 351
Query: 148 AFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGT 207
+FN +G L G +D +WD T +++ H F +CAFN +G
Sbjct: 352 SFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIF-----------SCAFNYKGN 400
Query: 208 LLAVGCNDGRIVLW 221
++ G D +W
Sbjct: 401 IVITGSKDNTCRIW 414
>sp|Q5BK30|WDR69_RAT Outer row dynein assembly protein 16 homolog OS=Rattus norvegicus
GN=Wdr69 PE=2 SV=1
Length = 415
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 114/298 (38%), Gaps = 24/298 (8%)
Query: 148 AFNK-RGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRG 206
AFN G +A G D LW T H + C+S FN +
Sbjct: 141 AFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHT-----AEIVCLS------FNPQS 189
Query: 207 TLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVL 266
T++A G D LWD + ++ H+ + S+S+ +G +II+ S D+ V +WD
Sbjct: 190 TVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDAS 249
Query: 267 TGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVA 326
TG + + + L M +L D + + D + +
Sbjct: 250 TGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDS 309
Query: 327 SFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLLVNTGDRLI 386
FD G+ + T ++ G V + + + I I F +GN LL + D+
Sbjct: 310 CFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTA 369
Query: 387 RVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIWE 444
R+++ Q + +Q L+ ++ C F+ G V GS + ++ IW
Sbjct: 370 RIWDVQT---------GQCLQVLEGHTDEIF--SCAFNYKGNIVITGS-KDNSCRIWR 415
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 120/323 (37%), Gaps = 50/323 (15%)
Query: 175 IAKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISA 234
+ K++ AH+ P A NK G+ G D +WD + +
Sbjct: 84 LFKVLRAHILP-----------LTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEG 132
Query: 235 HMHPVCSISWSR-NGYKIISASTDNNVCIWDVLTGECEQKYR-FPSPILKVQFHPRNDHM 292
H + V +I+++ G KI + S D +W TG+C +R + I+ + F+P++ +
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQST-V 191
Query: 293 FLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPAL 352
M A L D ++V + I SFD G ++TG+ V+V
Sbjct: 192 VATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTG 251
Query: 353 ELKASFKASTTAIKSIEF--------------------ARRGNCLLVNTG--DRLIRV-- 388
+ I S F A G C+ TG D ++
Sbjct: 252 RKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCF 311
Query: 389 -YNHQEVLNAGKDGDP--------EPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHA 439
Y + + A DG + I KL+ ++ K F+ G + GS+ + A
Sbjct: 312 DYTGKLIATASADGTARVYNATTRKCITKLEG--HEGEISKISFNPQGNRLLTGSSDKTA 369
Query: 440 LYIWEKSVGNLVKILHGTKGELL 462
IW+ G +++L G E+
Sbjct: 370 -RIWDVQTGQCLQVLEGHTDEIF 391
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
FS D + GS + + +W+ + G V L G E+L
Sbjct: 269 FSWDCSLILTGSMDKTCM-LWDATSGKCVATLTGHDDEIL-----------------DSC 310
Query: 149 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTL 208
F+ G L+A DG +++ TR + H +G + IS FN +G
Sbjct: 311 FDYTGKLIATASADGTARVYNATTRKCITKLEGH-----EGEISKIS------FNPQGNR 359
Query: 209 LAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIW 263
L G +D +WD T +++ H + S +++ G +I+ S DN+ IW
Sbjct: 360 LLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
>sp|Q8K450|SPG16_MOUSE Sperm-associated antigen 16 protein OS=Mus musculus GN=Spag16 PE=1
SV=1
Length = 639
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 94/244 (38%), Gaps = 14/244 (5%)
Query: 147 CAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRG 206
C F+ G+ LA D I LWD + H H + +C ++ G
Sbjct: 408 CCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVW-----------SCTWHSCG 456
Query: 207 TLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVL 266
+A D +WD + + H V SI + +++AS D + +WD
Sbjct: 457 DFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDAR 516
Query: 267 TGECEQK-YRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIV 325
TG+CEQ Y + F PR H+ C R L D IV ID
Sbjct: 517 TGKCEQSLYGHMHSVNDATFTPRG-HIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNE 575
Query: 326 ASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLLVNTGDRL 385
+FD+ G+ + ++ G + +L + ++ + + S+ F+ G L D
Sbjct: 576 VNFDQSGRVLAQASANGIIHLLDLKSGQIH-KLVGHESEVHSVVFSHLGENLYSGGSDGT 634
Query: 386 IRVY 389
IR++
Sbjct: 635 IRLW 638
>sp|Q0P593|WDR69_BOVIN Outer row dynein assembly protein 16 homolog OS=Bos taurus GN=WDR69
PE=2 SV=1
Length = 415
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 116/300 (38%), Gaps = 28/300 (9%)
Query: 148 AFNK-RGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRG 206
AFN G +A G D LW T H + C+S FN +
Sbjct: 141 AFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHT-----AEIVCLS------FNPQS 189
Query: 207 TLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVL 266
TL+A G D LWD + ++ H + S+S++ +G +II+ S D+ V +W+
Sbjct: 190 TLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEAD 249
Query: 267 TGECEQKYRFPSPILKVQFHPRN--DHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSI 324
TG + Y ++ N + L M L D + + D +
Sbjct: 250 TG--RKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEIL 307
Query: 325 VASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLLVNTGDR 384
+ FD G+ + T ++ G + S E + I I F +GN LL + D+
Sbjct: 308 DSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDK 367
Query: 385 LIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIWE 444
R+++ Q + +Q L+ ++ C F+ G+ + GS + + IW
Sbjct: 368 TARIWDAQT---------GQCLQVLEGHTDEIF--SCAFNYKGDIIITGS-KDNTCRIWR 415
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 120/323 (37%), Gaps = 50/323 (15%)
Query: 175 IAKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISA 234
+ K++ AH+ P A NK G+ G D LWD + +
Sbjct: 84 LFKVLRAHILP-----------LTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEG 132
Query: 235 HMHPVCSISWSR-NGYKIISASTDNNVCIWDVLTGECEQKYR-FPSPILKVQFHPRNDHM 292
H + V +I+++ G KI + S D +W V TG+C +R + I+ + F+P++ +
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQST-L 191
Query: 293 FLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPAL 352
M A L D ++ + S I SF+ G ++TG+ V V
Sbjct: 192 VATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTG 251
Query: 353 ELKASFKASTTAIKSIEF--------------------ARRGNCLLVNTG--DRLIRV-- 388
+ I S F A G C+ TG D ++
Sbjct: 252 RKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCF 311
Query: 389 -YNHQEVLNAGKDGDP--------EPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHA 439
Y + + A DG E + KL+ ++ K F+ G + GS+ + A
Sbjct: 312 DYTGKLIATASADGTARIFSAATRECVTKLEG--HEGEISKISFNPQGNRLLTGSSDKTA 369
Query: 440 LYIWEKSVGNLVKILHGTKGELL 462
IW+ G +++L G E+
Sbjct: 370 -RIWDAQTGQCLQVLEGHTDEIF 391
Score = 36.6 bits (83), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 49/134 (36%), Gaps = 29/134 (21%)
Query: 88 CFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTC 147
CF G+ + SA A I+ + V L G +GE+
Sbjct: 310 CFDYTGKLIATASADGTA-RIFSAATRECVTKLEGHEGEI-----------------SKI 351
Query: 148 AFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGT 207
+FN +G L G +D +WD T +++ H F +CAFN +G
Sbjct: 352 SFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIF-----------SCAFNYKGD 400
Query: 208 LLAVGCNDGRIVLW 221
++ G D +W
Sbjct: 401 IIITGSKDNTCRIW 414
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 87 CCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVT 146
FS DG V +GS R + +W+ + G +L + V+
Sbjct: 591 VAFSPDGSMVASGS-RDGTIRLWDVATGKERDVLQAPAENV-----------------VS 632
Query: 147 CAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRG 206
AF+ G++L G +D + LWD + S F+G D + AF+ G
Sbjct: 633 LAFSPDGSMLVHG-SDSTVHLWD--------VASGEALHTFEGHTDWVR---AVAFSPDG 680
Query: 207 TLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVL 266
LLA G +D I LWD + + H PV S+++ G + SAS D + IW +
Sbjct: 681 ALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHPEGTTLASASEDGTIRIWPIA 740
Query: 267 T 267
T
Sbjct: 741 T 741
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 131/344 (38%), Gaps = 70/344 (20%)
Query: 144 AVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFN 203
AV AF+ G+LLA G D I +WD + +H +G D + AF+
Sbjct: 462 AVAVAFSPGGSLLAGGSGDKLIHVWDVAS-------GDELH-TLEGHTDWVR---AVAFS 510
Query: 204 KRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIW 263
G LLA G +D + LWD + H H V I++S +G + S S D +W
Sbjct: 511 PDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSRDGTARLW 570
Query: 264 DVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLS 323
+V TG HA + TD + +
Sbjct: 571 NVATG-----------------------------TEHAVLKGHTDYVYAV---------- 591
Query: 324 IVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLLVNTGD 383
+F G V +G+ G + + + + +A + S+ F+ G+ +LV+ D
Sbjct: 592 ---AFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGS-MLVHGSD 647
Query: 384 RLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMW-KKCCFSGDGEYVCAGSARQHALYI 442
+ +++ + +G + L T W + FS DG + +GS + +
Sbjct: 648 STVHLWD----VASG--------EALHTFEGHTDWVRAVAFSPDGALLASGS-DDRTIRL 694
Query: 443 WEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISS-GVVSLW 485
W+ + L G E + V +HP +AS S G + +W
Sbjct: 695 WDVAAQEEHTTLEG-HTEPVHSVAFHPEGTTLASASEDGTIRIW 737
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 246,847,233
Number of Sequences: 539616
Number of extensions: 11060242
Number of successful extensions: 42766
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 635
Number of HSP's that attempted gapping in prelim test: 36300
Number of HSP's gapped (non-prelim): 4925
length of query: 622
length of database: 191,569,459
effective HSP length: 124
effective length of query: 498
effective length of database: 124,657,075
effective search space: 62079223350
effective search space used: 62079223350
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)