RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2110
(622 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 92.1 bits (227), Expect = 5e-21
Identities = 47/300 (15%), Positives = 104/300 (34%), Gaps = 13/300 (4%)
Query: 197 AVTC-AFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISAS 255
VT F+ +++ D I +WD+ T + + H V IS+ +G + S S
Sbjct: 19 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS 78
Query: 256 TDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVP 315
D + +WD EC + + N + + + + +
Sbjct: 79 ADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKT 138
Query: 316 IDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGN 375
+ + ++ G + + ++ V V E KA + ++ I +A +
Sbjct: 139 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESS 198
Query: 376 CLLVNTGDRLIRVYNHQE---VLNAGKDG-----DPEPIQKLQDLVNKTMW-KKCCFSGD 426
++ + + +L+ +D D L LV W + F
Sbjct: 199 YSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSG 258
Query: 427 GEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISS-GVVSLW 485
G+++ + + L +W+ +K L+ + + + +H P + + S V +W
Sbjct: 259 GKFILSCAD-DKTLRVWDYKNKRCMKTLNAHEHF-VTSLDFHKTAPYVVTGSVDQTVKVW 316
Score = 87.9 bits (216), Expect = 1e-19
Identities = 47/300 (15%), Positives = 89/300 (29%), Gaps = 32/300 (10%)
Query: 8 SFDRRGQHVVTGNSKGKVLVLSCPALE----LKASRGNCLLVNTGDRLIRVYNHQEVLNA 63
F +V+ + + V + LK + ++ + + +
Sbjct: 24 IFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTI 83
Query: 64 GKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGT 123
+ +G+++ + S R + +WE G VK G
Sbjct: 84 KLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS-RDKTIKMWEVQTGYCVKTFTGH 142
Query: 124 KGELLLDVVEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHM 183
+ N+ GTL+A ND + +W T+ + H
Sbjct: 143 REW-----------------VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHR 185
Query: 184 HPEFDGALDCISL---------AVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISA 234
H + S + T K G L G D I +WD T +
Sbjct: 186 HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG 245
Query: 235 HMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYR-FPSPILKVQFHPRNDHMF 293
H + V + + G I+S + D + +WD C + + + FH ++
Sbjct: 246 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 305
Score = 86.7 bits (213), Expect = 3e-19
Identities = 34/188 (18%), Positives = 68/188 (36%), Gaps = 15/188 (7%)
Query: 80 NKTMWKKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALD 139
++ + + DG + + S Q + +W + L + + + +
Sbjct: 142 HREWVRMVRPNQDGTLIASCSNDQT-VRVWVVATKECKAELREHRHVVECISWAPESSYS 200
Query: 140 CISL---AVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISL 196
IS + T K G L G D I +WD T + H +
Sbjct: 201 SISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG-------- 252
Query: 197 AVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISAST 256
F+ G + +D + +WD+ + K ++AH H V S+ + + +++ S
Sbjct: 253 ---VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 309
Query: 257 DNNVCIWD 264
D V +W+
Sbjct: 310 DQTVKVWE 317
Score = 72.1 bits (175), Expect = 3e-14
Identities = 46/358 (12%), Positives = 99/358 (27%), Gaps = 63/358 (17%)
Query: 87 CCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVT 146
F + + S + +W+ G+ + L G +V
Sbjct: 23 VIFHPVFSVMVSAS-EDATIKVWDYETGDFERTLKGHTD------------------SVQ 63
Query: 147 CAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRG 206
+ + +L K+ + + G
Sbjct: 64 D----------ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNG 113
Query: 207 TLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVL 266
+ D I +W+ T K + H V + +++G I S S D V +W V
Sbjct: 114 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 173
Query: 267 TGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVA 326
T EC+ + R +++ + S
Sbjct: 174 TKECKAELREHRHVVECISWAPESSYSSISEATG----------------------SETK 211
Query: 327 SFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLLVNTGDRLI 386
+ G +++G+ + + + ++ + F G +L D+ +
Sbjct: 212 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 271
Query: 387 RVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIWE 444
RV++++ + ++ L + F YV GS + +WE
Sbjct: 272 RVWDYK---------NKRCMKTLNAHEHFVT--SLDFHKTAPYVVTGSV-DQTVKVWE 317
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 85.9 bits (211), Expect = 8e-19
Identities = 31/183 (16%), Positives = 59/183 (32%), Gaps = 26/183 (14%)
Query: 82 TMWKKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCI 141
T + A + +W+ G + G + ++
Sbjct: 184 TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDIN------------- 230
Query: 142 SLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCA 201
F G A G +D L+D + I + +
Sbjct: 231 ----AICFFPNGNAFATGSDDATCRLFDLRA---------DQELMTYSHDNIICGITSVS 277
Query: 202 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVC 261
F+K G LL G +D +WD L A +++ H + V + + +G + + S D+ +
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337
Query: 262 IWD 264
IW+
Sbjct: 338 IWN 340
Score = 85.6 bits (210), Expect = 9e-19
Identities = 41/294 (13%), Positives = 88/294 (29%), Gaps = 16/294 (5%)
Query: 197 AVTC-AFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISAS 255
+ + LL DG++++WD T I V + +++ +G +
Sbjct: 57 KIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGG 116
Query: 256 TDNNVCIWDVLTGECEQKYRFPSP---ILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQ 312
DN I+++ T E + +D+ + L D + Q
Sbjct: 117 LDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQ 176
Query: 313 IVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFAR 372
+ + S + V+G + + +F + I +I F
Sbjct: 177 TTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP 236
Query: 373 RGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCA 432
GN + D R+++ + + + FS G + A
Sbjct: 237 NGNAFATGSDDATCRLFDLR---------ADQELMTYSHDNIICGITSVSFSKSGRLLLA 287
Query: 433 GSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISS-GVVSLW 485
G +W+ + +L G + + +A+ S + +W
Sbjct: 288 GYD-DFNCNVWDALKADRAGVLAGHDNR-VSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 70.1 bits (170), Expect = 1e-13
Identities = 46/306 (15%), Positives = 90/306 (29%), Gaps = 28/306 (9%)
Query: 87 CCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVT 146
+ D + + S + + N V + ++ T
Sbjct: 61 MHWGTDSRLLVSASQDGKLIIWDSYT-TNKVHAIPLRSSWVM-----------------T 102
Query: 147 CAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRG 206
CA+ G +A G D +++ TR +S + C L
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS-- 160
Query: 207 TLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVL 266
D LWD T + H V S+S + + +S + D + +WDV
Sbjct: 161 ------SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 214
Query: 267 TGECEQKYR-FPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIV 325
G C Q + S I + F P + + + ++ I
Sbjct: 215 EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGIT 274
Query: 326 A-SFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLLVNTGDR 384
+ SF + G+ ++ G V + + + G + + D
Sbjct: 275 SVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDS 334
Query: 385 LIRVYN 390
++++N
Sbjct: 335 FLKIWN 340
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 74.9 bits (182), Expect = 5e-15
Identities = 33/275 (12%), Positives = 75/275 (27%), Gaps = 16/275 (5%)
Query: 197 AVTC-AFNKRGTLLAVGCNDGRIVLWDFLTRGIAKI--ISAHMHPVCSISWSRNGYKIIS 253
++C A+NK T +A+ N+ + +++ ++ + H V + W+ + +I++
Sbjct: 9 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVT 68
Query: 254 ASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAV----LVDTDG 309
TD N +W + + + + + V + +
Sbjct: 69 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 128
Query: 310 DHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIE 369
D + + S V S D V+ A + + + T S
Sbjct: 129 DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKM 188
Query: 370 FARRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPI---------QKLQDLVNKTMWKK 420
++ + V +
Sbjct: 189 PFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLA 248
Query: 421 CCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILH 455
F + V AG L+ ++ + G L
Sbjct: 249 VTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGR 283
Score = 52.9 bits (125), Expect = 5e-08
Identities = 29/210 (13%), Positives = 51/210 (24%), Gaps = 29/210 (13%)
Query: 87 CCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVT 146
++ D + H ++I+EKS V++ E ++
Sbjct: 13 HAWNKDRTQIAICP-NNHEVHIYEKSGNKWVQV------------HELKEHNGQVT---G 56
Query: 147 CAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRG 206
+ + D +W L A +
Sbjct: 57 VDWAPDSNRIVTCGTDRNAYVWTLKG---------RTWKPTLVILRINRAARCVRWAPNE 107
Query: 207 TLLAVGCNDGRIVLWDFLTRG----IAKIISAHMHPVCSISWSRNGYKIISASTDNNVCI 262
AVG I + F I V S+ W N + + S D I
Sbjct: 108 KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRI 167
Query: 263 WDVLTGECEQKYRFPSPILKVQFHPRNDHM 292
+ E E++ K+ F
Sbjct: 168 FSAYIKEVEERPAPTPWGSKMPFGELMFES 197
Score = 51.4 bits (121), Expect = 2e-07
Identities = 9/64 (14%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 233 SAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFP---SPILKVQFHPRN 289
S + P+ +W+++ +I ++ V I++ + Q + + V + P +
Sbjct: 4 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS 63
Query: 290 DHMF 293
+ +
Sbjct: 64 NRIV 67
Score = 48.7 bits (114), Expect = 1e-06
Identities = 27/194 (13%), Positives = 51/194 (26%), Gaps = 23/194 (11%)
Query: 80 NKTMWKKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALD 139
S +V + + S + V + K + + L
Sbjct: 188 MPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLL 247
Query: 140 CISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVT 199
F +L+A G +D VL+ + + + + ++
Sbjct: 248 A------VTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLT---- 296
Query: 200 CAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNG----YKIISAS 255
D + G + S H + V IS G + +
Sbjct: 297 -------ARERFQNLDKKASSEGSAAAGA-GLDSLHKNSVSQISVLSGGKAKCSQFCTTG 348
Query: 256 TDNNVCIWDVLTGE 269
D + IWDV + E
Sbjct: 349 MDGGMSIWDVRSLE 362
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 72.9 bits (177), Expect = 2e-14
Identities = 46/352 (13%), Positives = 99/352 (28%), Gaps = 80/352 (22%)
Query: 212 GCNDGRIVLWDFLTRGIAKI----ISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLT 267
+ +L++ + H VC + +S +G + + + ++ V
Sbjct: 34 KQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSD 92
Query: 268 GECEQKYRFPS-------------------PILKVQFHP--------------------- 287
G + S I V F P
Sbjct: 93 GSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN 152
Query: 288 --------------------RNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVAS 327
+ + + D + + + ++ VA
Sbjct: 153 RKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAV 212
Query: 328 FDRRGQHVVTGNSKGKVLVLSCPALEL-------KASFKASTTAIKSIEFARRGNCLLVN 380
G+++ G+ V V L S ++ S+ F R G ++
Sbjct: 213 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 272
Query: 381 TGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMW-KKCCFSGDGEYVCAGSARQHA 439
+ DR ++++N Q N P + + + + EY+ +GS +
Sbjct: 273 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS-KDRG 331
Query: 440 LYIWEKSVGNLVKILHGTKGELL-----LDVVWHPVRPIIASISS-GVVSLW 485
+ W+K GN + +L G + ++ P + A+ S +W
Sbjct: 332 VLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIW 383
Score = 72.1 bits (175), Expect = 4e-14
Identities = 53/353 (15%), Positives = 104/353 (29%), Gaps = 77/353 (21%)
Query: 87 CCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVT 146
FS DGEY+ G + ++ S G+LV L + L +
Sbjct: 68 VKFSNDGEYLATGCNKT--TQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIR 125
Query: 147 C-AFNKRGTLLAVGCNDGRIVLWDFLTRGI------------------------------ 175
F+ G LA G D I +WD R I
Sbjct: 126 SVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDR 185
Query: 176 -AKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLT-------RG 227
+I + G +A G D + +WD T
Sbjct: 186 TVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDS 245
Query: 228 IAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHP 287
+ + H V S+ ++R+G ++S S D +V +W++ + + P+ +
Sbjct: 246 ENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI 305
Query: 288 RNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVL 347
+ L + + +++++G+ VL
Sbjct: 306 GHKDFVLSV------------------------------ATTQNDEYILSGSKDRGVLFW 335
Query: 348 SCPALELKASFKASTTAIKSIEFARR------GNCLLVNTGDRLIRVYNHQEV 394
+ + ++ S+ A N +GD R++ ++++
Sbjct: 336 DKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 388
Score = 65.2 bits (157), Expect = 7e-12
Identities = 26/186 (13%), Positives = 61/186 (32%), Gaps = 15/186 (8%)
Query: 38 SRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVC 97
G + + DR +RV++ + G + + +K F+ DG+ V
Sbjct: 215 GDGKYIAAGSLDRAVRVWDSET----GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV 270
Query: 98 AGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCAFNKRGTLLA 157
+GS + ++ N G + + + A + +
Sbjct: 271 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLS------VATTQNDEYIL 324
Query: 158 VGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGR 217
G D ++ WD + ++ H ++ +++A + + A G D +
Sbjct: 325 SGSKDRGVLFWDKKSGNPLLMLQGH-----RNSVISVAVANGSSLGPEYNVFATGSGDCK 379
Query: 218 IVLWDF 223
+W +
Sbjct: 380 ARIWKY 385
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 71.5 bits (173), Expect = 5e-14
Identities = 44/350 (12%), Positives = 93/350 (26%), Gaps = 21/350 (6%)
Query: 144 AVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFN 203
+V + G +D I ++D + + +S H + +
Sbjct: 14 SVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWA-----------LKYA 62
Query: 204 KRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKI-ISASTDNNVCI 262
G L++ + V + C K ++ S DN + +
Sbjct: 63 HGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHV 122
Query: 263 WDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHA-AVLVDTDGDHQIVPIDEDSD 321
W + + V P + F+ H +V + + +V D+
Sbjct: 123 WKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNT 182
Query: 322 LSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLLVNT 381
L + + ++++G++ + + S TT L
Sbjct: 183 LIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGH 242
Query: 382 GDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKK------CCFSGDGEYVCAGSA 435
+ + + L + D K + F + +GS
Sbjct: 243 TALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSE 302
Query: 436 RQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISSGVVSLW 485
Q I+ G LV + + V + + A G L
Sbjct: 303 NQ--FNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLE 350
Score = 47.2 bits (110), Expect = 3e-06
Identities = 51/362 (14%), Positives = 104/362 (28%), Gaps = 25/362 (6%)
Query: 87 CCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVT 146
C + YV G+ + +++ + L G G + G L S T
Sbjct: 17 TCLQFEDNYVITGA-DDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRT 75
Query: 147 CAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRG 206
+G L K I + D L L K
Sbjct: 76 VRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKL------PKES 129
Query: 207 TLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVL 266
++ G +++ + H + S +G ++S S DN + +WDV
Sbjct: 130 SVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVA 189
Query: 267 TGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVA 326
+C ++ + + D ++ + ++V
Sbjct: 190 QMKCLYI--LSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVG 247
Query: 327 SFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLLVNTGDRLI 386
+ +V+ + G + + F T + +I + +LV+ +
Sbjct: 248 LLRLSDKFLVSAAADGSIRGWDAN--DYSRKFSYHHTNLSAITTFYVSDNILVSGSENQF 305
Query: 387 RVYNHQ--EVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIWE 444
+YN + ++++A D + I + F G Q L I +
Sbjct: 306 NIYNLRSGKLVHANILKDADQIWSV------------NFKGKTLVAAVEKDGQSFLEILD 353
Query: 445 KS 446
S
Sbjct: 354 FS 355
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 71.0 bits (172), Expect = 6e-14
Identities = 49/375 (13%), Positives = 105/375 (28%), Gaps = 54/375 (14%)
Query: 109 WEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLW 168
W + K+L G V G + G +D + +W
Sbjct: 1 WRRGELKSPKVLKGHDD------------------HVITCLQFCGNRIVSGSDDNTLKVW 42
Query: 169 DFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGI 228
+T + + H + L +
Sbjct: 43 SAVTGKCLRTLVGHTGGVWS-----------SQMRDNII----ISGSTDRTLKVWNAETG 87
Query: 229 AKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPR 288
I + + H + +++S S D + +WD+ TG+C V+
Sbjct: 88 ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAA--VRCVQY 145
Query: 289 NDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLS 348
+ + + D + + + + ++ FD G HVV+G+ + V
Sbjct: 146 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWD 203
Query: 349 CPALELKASFKASTTAIKSIEFARRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQK 408
+ + +E + N L+ D ++++ D +
Sbjct: 204 VETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIW----------DIKTGQCLQ 251
Query: 409 LQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKIL----HGTKGELLLD 464
NK C + +V S + +W+ G ++ L G G ++
Sbjct: 252 TLQGPNKHQSAVTCLQFNKNFVITSSD-DGTVKLWDLKTGEFIRNLVTLESGGSGGVVWR 310
Query: 465 VVWHPVRPIIASISS 479
+ + + A S
Sbjct: 311 IRASNTKLVCAVGSR 325
Score = 54.4 bits (129), Expect = 1e-08
Identities = 50/322 (15%), Positives = 92/322 (28%), Gaps = 23/322 (7%)
Query: 87 CCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGE---------LLLDVVEFDGA 137
C G + +GS + L +W G ++ L G G +++
Sbjct: 21 TCLQFCGNRIVSGS-DDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTL 79
Query: 138 LDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLA 197
+ C G V C +R + + L A
Sbjct: 80 KVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAA 139
Query: 198 VTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTD 257
V C + G D + +WD T + H + V S+ + +G ++S S D
Sbjct: 140 VRCVQYDGRR-VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLD 196
Query: 258 NNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPID 317
++ +WDV TG C + +++ + + G
Sbjct: 197 TSIRVWDVETGNCIHTLTGHQSLT-SGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQG 255
Query: 318 EDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKA-----STTAIKSIEFAR 372
+ S V V+T + G V + E + S + I +
Sbjct: 256 PNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASN 315
Query: 373 RGNCLLV----NTGDRLIRVYN 390
V T + + V +
Sbjct: 316 TKLVCAVGSRNGTEETKLLVLD 337
Score = 37.9 bits (86), Expect = 0.003
Identities = 26/175 (14%), Positives = 53/175 (30%), Gaps = 40/175 (22%)
Query: 13 GQHVVTGNSKGKVLVLSCPALELK-------------ASRGNCLLVNTGDRLIRVYNHQE 59
G HVV+G+ + V + N L+ D ++++
Sbjct: 187 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW---- 242
Query: 60 VLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKI 119
D + NK C + +V S + +W+ G ++
Sbjct: 243 ------DIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSD-DGTVKLWDLKTGEFIRN 295
Query: 120 LHGTKGELLLDVVEFDGALDCISLAVTCAFNKRGTLLAVGCNDG----RIVLWDF 170
L +E G+ + + + AVG +G ++++ DF
Sbjct: 296 L---------VTLESGGSGGVVW---RIRASNTKLVCAVGSRNGTEETKLLVLDF 338
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 66.5 bits (160), Expect = 2e-12
Identities = 40/293 (13%), Positives = 79/293 (26%), Gaps = 8/293 (2%)
Query: 197 AVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISAST 256
AV G + CN + + +I + H H S +GY S
Sbjct: 20 AVVLGNTPAGDKIQY-CNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDV 78
Query: 257 DNNVCIWDVLTGECEQKYRFP---SPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQI 313
NV IWD K P P+ + + + + V R V
Sbjct: 79 HGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS 138
Query: 314 VPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARR 373
++ + + + + V K
Sbjct: 139 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYN 198
Query: 374 GNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAG 433
+ L + + + G L+++ + +S DG + +
Sbjct: 199 PDGSLFASTGGDGTIVLYN--GVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA 256
Query: 434 SARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISS-GVVSLW 485
SA + + IW + + K + + + + SIS+ G ++
Sbjct: 257 SADKT-IKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308
Score = 52.6 bits (124), Expect = 5e-08
Identities = 11/66 (16%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Query: 200 CAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHM-HPVCSISWSRNGYKIISASTDN 258
++ GT +A D I +W+ T + K I + ++S S +
Sbjct: 244 LTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANG 303
Query: 259 NVCIWD 264
+ +
Sbjct: 304 FINFVN 309
Score = 44.5 bits (103), Expect = 2e-05
Identities = 13/76 (17%), Positives = 21/76 (27%), Gaps = 10/76 (13%)
Query: 147 CAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRG 206
++ GT +A D I +W+ T + K I E
Sbjct: 244 LTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIE----------DQQLGIIWTK 293
Query: 207 TLLAVGCNDGRIVLWD 222
L +G I +
Sbjct: 294 QALVSISANGFINFVN 309
Score = 43.4 bits (100), Expect = 6e-05
Identities = 26/306 (8%), Positives = 72/306 (23%), Gaps = 23/306 (7%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTC- 147
+ G+ + + ++Y +I T
Sbjct: 25 NTPAGDKIQYCNGT--SVYTVPVGSLTDTEIYTEHSH------------------QTTVA 64
Query: 148 AFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGT 207
+ G A G G + +WD + + + S + A G
Sbjct: 65 KTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGR 124
Query: 208 LLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLT 267
+ G A+ +++ +G + + T
Sbjct: 125 ERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKST 184
Query: 268 GECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTD-GDHQIVPIDEDSDLSIVA 326
K+ + + + T + + S
Sbjct: 185 FGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGL 244
Query: 327 SFDRRGQHVVTGNSKGKVLVLSCPALELKASFKAST-TAIKSIEFARRGNCLLVNTGDRL 385
++ G + + ++ + + + L+++ + T + + L+ + +
Sbjct: 245 TWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGF 304
Query: 386 IRVYNH 391
I N
Sbjct: 305 INFVNP 310
Score = 41.8 bits (96), Expect = 2e-04
Identities = 33/314 (10%), Positives = 64/314 (20%), Gaps = 37/314 (11%)
Query: 144 AVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTC-AF 202
AV G + CN + + +I + H H T
Sbjct: 20 AVVLGNTPAGDKIQY-CNGTSVYTVPVGSLTDTEIYTEHSHQ------------TTVAKT 66
Query: 203 NKRGTLLAVGCNDGRI--VLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNV 260
+ G A G G + T + I PV ISW +I +
Sbjct: 67 SPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRER 126
Query: 261 CIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDS 320
L + V
Sbjct: 127 FGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG 186
Query: 321 DLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARR------- 373
+ + R S G +
Sbjct: 187 EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTW 246
Query: 374 ---GNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYV 430
G + + D+ I+++N + K + + + + ++ + +
Sbjct: 247 SPDGTKIASASADKTIKIWN----VATLK-----VEKTI-PVGTRIEDQQLGIIWTKQAL 296
Query: 431 CAGSARQHALYIWE 444
+ SA +
Sbjct: 297 VSISA-NGFINFVN 309
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 65.3 bits (157), Expect = 6e-12
Identities = 21/195 (10%), Positives = 52/195 (26%), Gaps = 9/195 (4%)
Query: 79 VNKTMWKKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGAL 138
+ K + + + A + + ++ S +L +VV +
Sbjct: 164 YDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVI 223
Query: 139 DCISLAVT-CAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLA 197
I + R G L D R + + I +
Sbjct: 224 PLIPGSPNPTKLVPRSMTSE----AGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIY 279
Query: 198 VTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTD 257
+ G ++ +D TR ++ + + + S + ++ D
Sbjct: 280 SVPVHGEFAAYYQGAPEKGVLLKYDVKTR----KVTEVKNNLTDLRLSADRKTVMVRKDD 335
Query: 258 NNVCIWDVLTGECEQ 272
+ + + E E+
Sbjct: 336 GKIYTFPLEKPEDER 350
Score = 41.8 bits (96), Expect = 2e-04
Identities = 10/101 (9%), Positives = 27/101 (26%), Gaps = 15/101 (14%)
Query: 139 DCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAV 198
I + + G ++ +D TR + ++ +
Sbjct: 274 SSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKNNLTDL------------- 320
Query: 199 TCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPV 239
+ + V +DG+I + + + P+
Sbjct: 321 --RLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPL 359
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 64.4 bits (155), Expect = 8e-12
Identities = 57/324 (17%), Positives = 106/324 (32%), Gaps = 26/324 (8%)
Query: 67 GDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGE 126
G P +++ L + + S +V G + +W+ S +
Sbjct: 37 GIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGC--VKVWDISHPGNKSPV------ 88
Query: 127 LLLDVVEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPE 186
LD + D + C G L VG + +WD
Sbjct: 89 SQLDCLNRDNYIRS------CKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAP 142
Query: 187 FDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSR 246
A + + C+DG I +WD + + + H I S
Sbjct: 143 AC---------YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISN 193
Query: 247 NGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVD 306
+G K+ + DN V WD+ G Q++ F S I + + P + + + + VL
Sbjct: 194 DGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHV 253
Query: 307 TDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIK 366
D + + E LS+ F G+ V+ + P K ++++
Sbjct: 254 NKPDKYQLHLHESCVLSL--KFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKE-SSSVL 310
Query: 367 SIEFARRGNCLLVNTGDRLIRVYN 390
S + + ++ +GD+ VY
Sbjct: 311 SCDISVDDKYIVTGSGDKKATVYE 334
Score = 64.1 bits (154), Expect = 1e-11
Identities = 13/67 (19%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Query: 200 CAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNN 259
F G D + W G + S V S S + I++ S D
Sbjct: 271 LKFAYCGKWFVSTGKDNLLNAWRTPY-GASIFQSKESSSVLSCDISVDDKYIVTGSGDKK 329
Query: 260 VCIWDVL 266
+++V+
Sbjct: 330 ATVYEVI 336
Score = 61.4 bits (147), Expect = 8e-11
Identities = 40/306 (13%), Positives = 76/306 (24%), Gaps = 28/306 (9%)
Query: 2 DLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASRGNCLLVNTGDRLIRVYNHQEVL 61
D I R + + T N V ++ S + G ++V++
Sbjct: 31 DALIGPGIPRHARQINTLNHGEVVCAVTI-------SNPTRHVYTGGKGCVKVWDIS--- 80
Query: 62 NAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSAR--------------QHALY 107
G+ P+ +L L + C DG + G A
Sbjct: 81 ---HPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAEL 137
Query: 108 IWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVL 167
+ I +K D + + F +
Sbjct: 138 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTK 197
Query: 168 WDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRG 227
D S + + G LAVG + + +
Sbjct: 198 LWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVE-VLHVNKP 256
Query: 228 IAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHP 287
+ H V S+ ++ G +S DN + W G + + S +L
Sbjct: 257 DKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISV 316
Query: 288 RNDHMF 293
+ ++
Sbjct: 317 DDKYIV 322
Score = 56.4 bits (134), Expect = 4e-09
Identities = 39/303 (12%), Positives = 77/303 (25%), Gaps = 23/303 (7%)
Query: 144 AVTC-AFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAF 202
V + + G G + +WD G +S D + C
Sbjct: 53 VVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRS------CKL 105
Query: 203 NKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCI 262
G L VG + +WD + + + + S ++ I
Sbjct: 106 LPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI 165
Query: 263 WDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDL 322
+F ++ + + D D
Sbjct: 166 AVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTS 225
Query: 323 SI-VASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLLVNT 381
I + G+ + G V V K + + S++FA G +
Sbjct: 226 QIFSLGYCPTGEWLAVGMESSNVEV-LHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTG 284
Query: 382 GDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALY 441
D L+ + + + + + C S D +Y+ GS +
Sbjct: 285 KDNLLNAWRTPYGASIFQSKESSSVLS------------CDISVDDKYIVTGSGDKK-AT 331
Query: 442 IWE 444
++E
Sbjct: 332 VYE 334
Score = 48.3 bits (113), Expect = 1e-06
Identities = 9/78 (11%), Positives = 20/78 (25%), Gaps = 12/78 (15%)
Query: 147 CAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRG 206
F G D + W G + S ++C +
Sbjct: 271 LKFAYCGKWFVSTGKDNLLNAWRTPY-GASIFQSKESSS-----------VLSCDISVDD 318
Query: 207 TLLAVGCNDGRIVLWDFL 224
+ G D + +++ +
Sbjct: 319 KYIVTGSGDKKATVYEVI 336
Score = 46.0 bits (107), Expect = 8e-06
Identities = 32/288 (11%), Positives = 72/288 (25%), Gaps = 41/288 (14%)
Query: 235 HMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFP------SPILKVQFHPR 288
H VC+++ S + + V +WD+ + + I + P
Sbjct: 50 HGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPD 108
Query: 289 NDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLS-IVASFDRRGQHVVTGNSKGKVLVL 347
+ + ++ +I S + + + + S G + V
Sbjct: 109 GCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 168
Query: 348 SCPALELKASFKASTTAIKSIEFARRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQ 407
L F+ T I+ + G L D +R ++ +E + I
Sbjct: 169 DLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIF 228
Query: 408 KLQDLVNKTMWKKCCF-----------------------------SGDGEYVCAGSARQH 438
L + G++ + +
Sbjct: 229 SLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGK-DN 287
Query: 439 ALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIASISS-GVVSLW 485
L W G + + +L I + S +++
Sbjct: 288 LLNAWRTPYGASIFQSKESSS--VLSCDISVDDKYIVTGSGDKKATVY 333
Score = 44.4 bits (103), Expect = 3e-05
Identities = 8/92 (8%), Positives = 27/92 (29%), Gaps = 19/92 (20%)
Query: 80 NKTMWKKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALD 139
+++ F+ G++ + + L W G + +
Sbjct: 264 HESCVLSLKFAYCGKWFVSTGK-DNLLNAWRTPYGASIFQSKESSS-------------- 308
Query: 140 CISLAVTCAFNKRGTLLAVGCNDGRIVLWDFL 171
++C + + G D + +++ +
Sbjct: 309 ----VLSCDISVDDKYIVTGSGDKKATVYEVI 336
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 59.0 bits (141), Expect = 5e-10
Identities = 29/252 (11%), Positives = 64/252 (25%), Gaps = 27/252 (10%)
Query: 38 SRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKK---CCFSGDGE 94
G + ++ + + + + M ++ + DG
Sbjct: 98 PDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS 157
Query: 95 YVCAGSARQHALYIWEKSVGNLVKILHGTKG--------ELLLDVVEFDGALDCISLAVT 146
AG Y + G L ++L + L
Sbjct: 158 LYVAGPDI----YKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTI 213
Query: 147 CAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRG 206
F A + D T A + + T + +
Sbjct: 214 ARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELY----------FTGLRSPKD 263
Query: 207 TLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVL 266
R+ +D R + K + H +++ + G K+ T N++ +++
Sbjct: 264 PNQIY-GVLNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPD 321
Query: 267 TGECEQKYRFPS 278
T E + + P
Sbjct: 322 TLEKVKNIKLPG 333
Score = 54.4 bits (129), Expect = 2e-08
Identities = 30/338 (8%), Positives = 70/338 (20%), Gaps = 44/338 (13%)
Query: 242 ISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFP--SPILKVQFHPRNDHMFLVCPMR 299
+ +I + NN+ + DV + + P P N +++
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 300 HAAVLVDTDGDHQIVPIDEDSDLSI------------------VASFDRRGQHVVTGNSK 341
+D D + S + +
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 121
Query: 342 GKVLVLSCPALELKASFKA--STTAIKSIEFARRGNCLLVNTGDRLIRVYNHQEVLNAGK 399
++ V S + + + A G+ + + V + +
Sbjct: 122 PRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPL 181
Query: 400 DGDPEPI----------QKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIWEKSVGN 449
+M D + A + + + G
Sbjct: 182 RNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK 241
Query: 450 LVKILHGTKGELLLDVVWHPVRPIIASISSGVVSLWAQNQVENWSAFAPDFKELDENVEY 509
EL + P P ++ + K +
Sbjct: 242 THTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYD----------LKQRKLIKA-ANL 290
Query: 510 DERESEFDISDEDKSVAQGSDDQDEELEIDVTSVEPVA 547
D + + G D + + ++E V
Sbjct: 291 DHTYYCVAFDKKGDKLYLGGTFNDLAV-FNPDTLEKVK 327
Score = 45.9 bits (107), Expect = 9e-06
Identities = 29/311 (9%), Positives = 70/311 (22%), Gaps = 31/311 (9%)
Query: 8 SFDRRGQHVVTGNSKGKVLVLSCPALELKASR----------------GNCLLV-NTGDR 50
+ ++++ N + V+ + + S V N
Sbjct: 3 ALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYG 62
Query: 51 LIRVYN---HQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGD---GEYVCAGSARQH 104
I + + +A P + + + K ++ +
Sbjct: 63 DIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPP 122
Query: 105 ALYIWEKSVGNLVKILHGTKGELLLDVVEF--DGALDCISLAVTCAFNKRGTLLAVGCND 162
L ++ + G K + + ++ DG+L + K G
Sbjct: 123 RLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLR 182
Query: 163 GRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWD 222
+ + P + L F A + D
Sbjct: 183 NWNRKGYSAPDVL------YFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVD 236
Query: 223 FLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILK 282
T A + + N + +D+ + +
Sbjct: 237 LKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTYYC 296
Query: 283 VQFHPRNDHMF 293
V F + D ++
Sbjct: 297 VAFDKKGDKLY 307
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 59.4 bits (143), Expect = 6e-10
Identities = 33/197 (16%), Positives = 55/197 (27%), Gaps = 21/197 (10%)
Query: 162 DGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLW 221
G+I L D T I ++ + G L V DG++ +
Sbjct: 41 AGQIALIDGSTYEIKTVLDTGYAVHI------------SRLSASGRYLFVIGRDGKVNMI 88
Query: 222 DFLT---RGIAKII--SAHMHPVCSISWSRNG-YKIISASTDNNVCIWDVLTGECEQKYR 275
D +A+I S S Y I A I D T E ++
Sbjct: 89 DLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 148
Query: 276 FPSPILKVQ-FHPRNDHMFLVC--PMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRG 332
Q +HP ++ V V G +V + ++L R
Sbjct: 149 TRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERF 208
Query: 333 QHVVTGNSKGKVLVLSC 349
H + + + +
Sbjct: 209 LHDGGLDGSHRYFITAA 225
Score = 32.8 bits (74), Expect = 0.12
Identities = 27/257 (10%), Positives = 65/257 (25%), Gaps = 15/257 (5%)
Query: 251 IISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGD 310
++ + + D T E + + + ++F V ++D
Sbjct: 35 SVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLF-VIGRDGKVNMIDLWMK 93
Query: 311 HQIVPI-----DEDSDLSIVASFDRRGQHV-VTGNSKGKVLVLSCPALELKASFKASTTA 364
E + ++ + +++ LE K
Sbjct: 94 EPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMT 153
Query: 365 IKSIEFARRGN-CLLVNTGDRLIRVYNHQEVLNAGK-DGDPEPIQKLQDLVNKTMWKKCC 422
E+ ++ + R + N +E D K ++ +
Sbjct: 154 YDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGG 213
Query: 423 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRP------IIAS 476
G Y + ++ L + + G LV I + V P +
Sbjct: 214 LDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSH 273
Query: 477 ISSGVVSLWAQNQVENW 493
+ V+L + +
Sbjct: 274 MGDDSVALIGTDPEGHP 290
Score = 31.3 bits (70), Expect = 0.39
Identities = 35/297 (11%), Positives = 69/297 (23%), Gaps = 34/297 (11%)
Query: 89 FSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCA 148
+ +Y AG+ I + KI + + I
Sbjct: 116 EGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAI------L 169
Query: 149 FNKRGTLLAVGCND-GRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGT 207
+ V + G+I+L D+ K +
Sbjct: 170 ASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDG----------GLDGSHR 219
Query: 208 LLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWD--- 264
N ++ G I N + D
Sbjct: 220 YFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSV 279
Query: 265 VLTGECEQKY-RFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLS 323
L G + + IL +F ++ + ++ ++++S
Sbjct: 280 ALIGTDPEGHPDNAWKILDSFPALGGGSLF-------IKTHPNSQYLYVDATLNPEAEIS 332
Query: 324 -IVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLLV 379
VA FD + + S + L P E + + EF + G +
Sbjct: 333 GSVAVFD--IKAMTGDGSDPEFKTL--PIAEWAGITEGQPRVV-QGEFNKDGTEVWF 384
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 58.0 bits (138), Expect = 7e-10
Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 182 HMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRG-IAKIISAHMHPVC 240
+ + + L+A G D I ++ I K ++AH V
Sbjct: 203 FRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVN 262
Query: 241 SISWSRNGYKIISASTDNNVCIWDVL 266
++ W ++S+ D + W+V+
Sbjct: 263 NLLWETPS-TLVSSGADACIKRWNVV 287
Score = 50.0 bits (117), Expect = 4e-07
Identities = 36/291 (12%), Positives = 75/291 (25%), Gaps = 23/291 (7%)
Query: 197 AVTC-AFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISAS 255
+T N L G DGRI+ W + H + + S+ S+ +
Sbjct: 15 GITALTVNP----LISGSYDGRIMEWSSSSMH-----QDHSNLIVSLDNSKAQEYSSISW 65
Query: 256 TDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVP 315
D Q + ND L+ ++ +
Sbjct: 66 DDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSA 125
Query: 316 IDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGN 375
+ + V + V + L P I +
Sbjct: 126 VSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTP----------LRAKPSYISISPSET 175
Query: 376 CLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSA 435
+ I +Y+ Q + + + V GS
Sbjct: 176 YIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSL 235
Query: 436 RQHALYIWE-KSVGNLVKILHGTKGELLLDVVWHPVRPIIASISSGVVSLW 485
++I+ K ++K L+ K + +++W +++S + + W
Sbjct: 236 -DTNIFIYSVKRPMKIIKALNAHKDGVN-NLLWETPSTLVSSGADACIKRW 284
Score = 33.0 bits (73), Expect = 0.082
Identities = 34/276 (12%), Positives = 69/276 (25%), Gaps = 34/276 (12%)
Query: 144 AVTC-AFNKRGTLLAVGCNDGRIVLWDFLTRG-----------------IAKIISAHMHP 185
+T N L G DGRI+ W + + I
Sbjct: 15 GITALTVNP----LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLK 70
Query: 186 EFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWS 245
A AV ND +++ T I K + +
Sbjct: 71 VNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQ 130
Query: 246 RNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLV 305
+ V L + K + + P ++ M +
Sbjct: 131 NYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYD 190
Query: 306 DTDGD----------HQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCP-ALEL 354
+ +I I + V TG+ + + S +++
Sbjct: 191 LQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKI 250
Query: 355 KASFKASTTAIKSIEFARRGNCLLVNTGDRLIRVYN 390
+ A + ++ + + L+ + D I+ +N
Sbjct: 251 IKALNAHKDGVNNLLWE-TPSTLVSSGADACIKRWN 285
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 55.6 bits (132), Expect = 6e-09
Identities = 38/287 (13%), Positives = 81/287 (28%), Gaps = 46/287 (16%)
Query: 142 SLAVTC-AFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTC 200
S V C ++ + G D I +WD T +I++ H D +
Sbjct: 15 SKGVYCLQYD--DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGS 72
Query: 201 AFNKRGTLLA---------------------------VGCNDGRIVLWDF-LTRGIAKII 232
+ + D I +WD I
Sbjct: 73 SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRR 132
Query: 233 SAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHM 292
H + I+SAS D + +W+ T E + D +
Sbjct: 133 VLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEF--VRTLNGHKRGIACLQYRDRL 190
Query: 293 FLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLV------ 346
+ + L D + + ++ + +V + +V+G GK+ V
Sbjct: 191 VVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRIVSGAYDGKIKVWDLVAA 248
Query: 347 ---LSCPALELKASFKASTTAIKSIEFARRGNCLLVNTGDRLIRVYN 390
+ + + + ++F ++ ++ D I +++
Sbjct: 249 LDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIWD 293
Score = 49.5 bits (116), Expect = 6e-07
Identities = 36/277 (12%), Positives = 82/277 (29%), Gaps = 23/277 (8%)
Query: 88 CFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALD-------- 139
C D + + +G R + + IW+K+ +IL G G +L + +
Sbjct: 20 CLQYDDQKIVSGL-RDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVR 78
Query: 140 --CISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALD-CISL 196
++ + ++ + +
Sbjct: 79 VWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR 138
Query: 197 AVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISAST 256
A + + D I +W+ T + ++ H + + + ++S S+
Sbjct: 139 AAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSS 196
Query: 257 DNNVCIWDVLTGECEQKYRFPSPILKVQFHPRN-------DHMFLVCPMRHAAVLVDTDG 309
DN + +WD+ G C + +++ D V + A G
Sbjct: 197 DNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAG 256
Query: 310 DHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLV 346
+ + E S FD +V+ + +L+
Sbjct: 257 TLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILI 291
Score = 47.9 bits (112), Expect = 2e-06
Identities = 40/301 (13%), Positives = 86/301 (28%), Gaps = 33/301 (10%)
Query: 195 SLAVTC-AFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIIS 253
S V C ++ + G D I +WD T +I++ H V + + S
Sbjct: 15 SKGVYCLQYD--DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGS 72
Query: 254 ASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQI 313
+ + V + + + + + + + TD +
Sbjct: 73 SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRR 132
Query: 314 VPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARR 373
+ V FD + +G+ + V + E + I +++ R
Sbjct: 133 -VLVGHRAAVNVVDFDDKYIVSASGD--RTIKVWNTSTCEFVRTLNGHKRGIACLQY--R 187
Query: 374 GNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAG 433
++ + D IR++ D E L+ V + +
Sbjct: 188 DRLVVSGSSDNTIRLW------------DIECGACLR--VLEGHEELVRCIRFDNKRIVS 233
Query: 434 SARQHALYIWEKSVGNLVKILHGTKGELLL--------DVVWHPVRPIIASISS-GVVSL 484
A + +W+ + GT L + + + I S S + +
Sbjct: 234 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ--IVSSSHDDTILI 291
Query: 485 W 485
W
Sbjct: 292 W 292
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 55.2 bits (131), Expect = 9e-09
Identities = 13/77 (16%), Positives = 27/77 (35%), Gaps = 4/77 (5%)
Query: 228 IAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDV----LTGECEQKYRFPSPILKV 283
I +I A + I + ++ S D ++ ++ + Q R+ P+L
Sbjct: 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCC 62
Query: 284 QFHPRNDHMFLVCPMRH 300
F D V ++
Sbjct: 63 NFIDNTDLQIYVGTVQG 79
Score = 53.7 bits (127), Expect = 3e-08
Identities = 23/165 (13%), Positives = 49/165 (29%), Gaps = 22/165 (13%)
Query: 147 CAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRG 206
+ + L VG N+ ++ + + K
Sbjct: 154 FTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGL-------KYQIRDVALLPKEQ 206
Query: 207 TLLAVGCNDGRIVLWDFLTRGIAKIIS---------------AHMHPVCSISWSRNGYKI 251
A DGR+ + F +G S +PV SI +S +
Sbjct: 207 EGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFL 266
Query: 252 ISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVC 296
+A +D + W++ T + + + + V+ ++ + L
Sbjct: 267 YTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLAT 311
Score = 53.3 bits (126), Expect = 4e-08
Identities = 30/309 (9%), Positives = 84/309 (27%), Gaps = 22/309 (7%)
Query: 197 AVTC-AFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISA---HMHPVCSISWSRN-GYKI 251
++ +LL + DG + ++ F + + + HP+ ++ N +I
Sbjct: 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQI 72
Query: 252 ISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDH 311
+ + D++ Q L + + L+ + V ++
Sbjct: 73 YVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNY 132
Query: 312 QI-------VPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTA 364
+ + + + + D ++ G + +V P E +
Sbjct: 133 GDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGL 192
Query: 365 ----IKSIEFARRGNCLLVNTGDRLIRVY---NHQEVLNAGKDGDPEPIQKLQDLVNKTM 417
+ ++ D + V + + N+ K + N
Sbjct: 193 KYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAY 252
Query: 418 WKKC-CFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVWHPVRPIIAS 476
FS +++ + + W +K + ++ + +A+
Sbjct: 253 PVNSIEFSPRHKFLYTAGS-DGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLAT 311
Query: 477 ISSGVVSLW 485
S
Sbjct: 312 -SDDTFKTN 319
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 54.9 bits (130), Expect = 2e-08
Identities = 31/341 (9%), Positives = 73/341 (21%), Gaps = 11/341 (3%)
Query: 153 GTLLAVGCNDGRIVLWDFLTR----GIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTL 208
+ DG + +WD K S +H G L L
Sbjct: 24 NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHK--SGLHHVDVLQAIERDAFELCL 81
Query: 209 LAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVL-T 267
+A G ++ + K + + ++ + + N+ + L
Sbjct: 82 VATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVA 141
Query: 268 GECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVAS 327
+ + + V +D ++A+
Sbjct: 142 TDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER-GLIAT 200
Query: 328 FDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLLVNTGDRLIR 387
G ++ S + L + + + + S + + N+ +
Sbjct: 201 GFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITL 260
Query: 388 VYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIWEKSV 447
Q + W D + L W+
Sbjct: 261 YETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 320
Query: 448 GNLVKILHGTKGE---LLLDVVWHPVRPIIASISSGVVSLW 485
+ L+ + + +A V
Sbjct: 321 KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFL 361
Score = 47.9 bits (112), Expect = 2e-06
Identities = 41/338 (12%), Positives = 89/338 (26%), Gaps = 35/338 (10%)
Query: 19 GNSKGKVLVLSCPALELKASRGNCLLVNTGDRLIRVYN----HQEVLNAGKDGDPEPIQK 74
+ G V A+E A + + + Y + + D
Sbjct: 58 VHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDM 117
Query: 75 LQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEF 134
+ W + A + + L L
Sbjct: 118 KKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTV 177
Query: 135 DGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCI 194
+ + A + ++RG L+A G N+G + + + + + + ++
Sbjct: 178 ESPMTPSQFATSVDISERG-LIATGFNNGTVQISEL-----STLRPLYNFESQHSMINNS 231
Query: 195 SLAVTCAFNKRGTLLAVGCNDGRIVLWDF----------------LTRGIAKIISAHMHP 238
+ + F+ +G+LLA+ + + + AH
Sbjct: 232 NSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW 291
Query: 239 VCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYR-----FPSPILKVQFHPRNDHMF 293
V S+S++ +G + SA D + WDV T E + +
Sbjct: 292 VMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDE-HGDSL 350
Query: 294 LVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRR 331
+ L + + ++ DR
Sbjct: 351 AEPGVFDVKFL---KKGWRSGMGADLNESLCCVCLDRS 385
Score = 40.2 bits (92), Expect = 6e-04
Identities = 16/123 (13%), Positives = 34/123 (27%), Gaps = 4/123 (3%)
Query: 229 AKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRF--PSPILKVQFH 286
A AH + S+S + +S S D + +WD + E + K H
Sbjct: 7 ANAGKAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLH 64
Query: 287 PRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLV 346
+ + ++ T ++ + + + + K
Sbjct: 65 HVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWA 124
Query: 347 LSC 349
L
Sbjct: 125 LKW 127
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 54.2 bits (128), Expect = 2e-08
Identities = 13/88 (14%), Positives = 27/88 (30%), Gaps = 5/88 (5%)
Query: 182 HMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPV-- 239
+ + + + A D I +WD T + + +
Sbjct: 239 EFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGN 298
Query: 240 --CSISWSRNGYKIISASTDNNVCIWDV 265
+ + NG IIS S D + +++
Sbjct: 299 QQVGVVATGNGR-IISLSLDGTLNFYEL 325
Score = 51.1 bits (120), Expect = 2e-07
Identities = 32/314 (10%), Positives = 76/314 (24%), Gaps = 24/314 (7%)
Query: 88 CFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTC 147
+ + + + + + + V+F G + V
Sbjct: 24 SYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPV------------VQFTGHGSSVVTTVKF 71
Query: 148 AFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGT 207
+ K L G G++++W + + + ++ EF IS ++ F R
Sbjct: 72 SPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPIS-DISWDFEGRRL 130
Query: 208 LLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLT 267
+ D V + + +S H + + ++ D+ ++
Sbjct: 131 CVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGP 190
Query: 268 GECEQKYR--------FPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDED 319
F + + I E
Sbjct: 191 PFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEP 250
Query: 320 SDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFK--ASTTAIKSIEFARRGNCL 377
I A Q T + + V + + + + GN
Sbjct: 251 VQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGR 310
Query: 378 LVNTG-DRLIRVYN 390
+++ D + Y
Sbjct: 311 IISLSLDGTLNFYE 324
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 53.3 bits (126), Expect = 4e-08
Identities = 37/306 (12%), Positives = 73/306 (23%), Gaps = 35/306 (11%)
Query: 88 CFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTC 147
+ G A + +L + G + + + E + +
Sbjct: 40 MVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE------------ERVKSLFGA 87
Query: 148 AFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGT 207
A + G LA+ + R+ L F + + A + A+ + G+
Sbjct: 88 ALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGS 147
Query: 208 LLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGY------------------ 249
L D ++ + T K I + + +
Sbjct: 148 KLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARK 207
Query: 250 ---KIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVD 306
+ + D+ TGE + + D
Sbjct: 208 DIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLES-FD 266
Query: 307 TDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIK 366
+ + I + V G V G + G + LE K A
Sbjct: 267 LEKNASIKRVPLPHSYYSVN-VSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASM 325
Query: 367 SIEFAR 372
S+ R
Sbjct: 326 SLASVR 331
Score = 52.5 bits (124), Expect = 6e-08
Identities = 26/242 (10%), Positives = 58/242 (23%), Gaps = 16/242 (6%)
Query: 41 NCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGS 100
L + + + + + D E + + + ++ DG +
Sbjct: 94 KTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLG 153
Query: 101 ARQHALYIWEKSVGNLVKILHGTKGELLLDVVEF---DGALDCISLAVTCAFNKRGTLLA 157
H + ++ I V + K
Sbjct: 154 RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPAD 213
Query: 158 VGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGR 217
++ D T +A M + + A N T
Sbjct: 214 PTAYRTGLLTMDLETGEMAMREVRIMDVFY----------FSTAVNPAKTRAF--GAYNV 261
Query: 218 IVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFP 277
+ +D K + H S++ S +G + ++ +D T E + + P
Sbjct: 262 LESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320
Query: 278 SP 279
Sbjct: 321 GN 322
Score = 42.5 bits (98), Expect = 9e-05
Identities = 18/179 (10%), Positives = 44/179 (24%), Gaps = 21/179 (11%)
Query: 75 LQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIW---EKSVGNLVKILHGTKGELLLDV 131
++D ++ + D V + + + G L +D+
Sbjct: 167 VEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDL 226
Query: 132 ----VEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEF 187
+ + A N T + +D K +
Sbjct: 227 ETGEMAMREVRIMDVFYFSTAVNPAKTRAF--GAYNVLESFDLEKNASIKRVPLPHSYY- 283
Query: 188 DGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSR 246
+ + G+ + +G G + +D T + + S++ R
Sbjct: 284 -----------SVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASVR 331
Score = 37.9 bits (86), Expect = 0.003
Identities = 32/318 (10%), Positives = 79/318 (24%), Gaps = 27/318 (8%)
Query: 251 IISASTDNNVCIWDVLTGECEQKYRFPSP---ILKVQFHPRNDHMFLVCPMRHAAVLVDT 307
I++ + + + + D ++ + P + + V +D
Sbjct: 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63
Query: 308 DGDHQIVPIDEDSDLSIV-----ASFDRRGQHVVTGNSKGKVLVLSCPALELKASFK--A 360
+ ID + V A+ G+ + S ++ + + +
Sbjct: 64 VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE 123
Query: 361 STTAIKSIEFARRGNCLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKK 420
+ + K+ E R+ L + + + G + +Q +
Sbjct: 124 TLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQS-----WEAE 178
Query: 421 CCFSGDGEYVCAGSARQHALYIW---EKSVGNLVKILHGTKGELLLD--------VVWHP 469
D V + + + G L +D
Sbjct: 179 TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI 238
Query: 470 VRPIIASISSGVVSLWAQNQVENWSAFAPDFKELDENVEYDERESEFDISDEDKSVAQGS 529
+ S + A +F + + V ++S + +V G
Sbjct: 239 MDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGG 298
Query: 530 DDQDEELEIDVTSVEPVA 547
D D ++E
Sbjct: 299 ALGDLAA-YDAETLEKKG 315
Score = 37.5 bits (85), Expect = 0.004
Identities = 30/301 (9%), Positives = 72/301 (23%), Gaps = 28/301 (9%)
Query: 40 GNCLLV-NTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCA 98
G + + L G+ + ++ V S DG+ +
Sbjct: 45 GRIAYATVNKSESLVKID----LVTGETLGRIDLSTPEERVK--SLFGAALSPDGKTLAI 98
Query: 99 GSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVTCAFNKRGTLLAV 158
+ + V + A+ + G+ L
Sbjct: 99 YESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITML-------AWARDGSKLYG 151
Query: 159 GCNDGRIVLWDFLTRGIAKIISAHMHPEF----------DGALDCISLAVTCAFNKRGTL 208
D ++ + T K I + + + K
Sbjct: 152 LGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDP 211
Query: 209 LAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTG 268
++ D T G + + V S + N K + N + +D+
Sbjct: 212 ADPTAYRTGLLTMDLET-GEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKN 270
Query: 269 ECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQI--VPIDEDSDLSIVA 326
++ P V ++ + D + + V + ++ +S+ +
Sbjct: 271 ASIKRVPLPHSYYSVNVSTDGSTVW-LGGALGDLAAYDAETLEKKGQVDLPGNASMSLAS 329
Query: 327 S 327
Sbjct: 330 V 330
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 52.7 bits (124), Expect = 4e-08
Identities = 33/292 (11%), Positives = 83/292 (28%), Gaps = 34/292 (11%)
Query: 228 IAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYR--FPSPILKVQF 285
I ++ H + ++S S +G + SA + ++ WD+ TG + + + I ++
Sbjct: 4 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKT 63
Query: 286 HPRNDHMFLVCPMRHAAVLVDTDG-DHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKV 344
+ D + V G D ++ S + + G V K
Sbjct: 64 TSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIA 123
Query: 345 LVLSCPALELKASFKASTTAIKSIEFA-----------------------------RRGN 375
+ E+ S+ +S A+ + +
Sbjct: 124 IYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEIT 183
Query: 376 CLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSA 435
+ + + + + + + T C A +
Sbjct: 184 SVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGS 243
Query: 436 RQHALYIWEKSVGNLVKIL--HGTKGELLLDVVWHPVRPIIASISSGVVSLW 485
+++ +W + + I+ + V+W I+++ + W
Sbjct: 244 LDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFW 295
Score = 48.4 bits (113), Expect = 1e-06
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 210 AVGCNDGRIVLWDFLTRGIAKIISAHMHP--VCSISWSRNGYKIISASTDNNVCIWDV 265
A G D +++W+ II H + N I+SA D+N+ W+V
Sbjct: 240 ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
Score = 42.3 bits (97), Expect = 1e-04
Identities = 34/335 (10%), Positives = 77/335 (22%), Gaps = 44/335 (13%)
Query: 113 VGNLVKILHGTKGELLLDVVEFDGALDCISLAVTC-AFNKRGTLLAVGCNDGRIVLWDFL 171
+G++ ++ +G A+T + + G L +G I WD
Sbjct: 1 LGSIDQVRYGHNK------------------AITALSSSADGKTLFSADAEGHINSWDIS 42
Query: 172 T-RGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGI-A 229
T H +T L D + + G+ +
Sbjct: 43 TGISNRVFPDVHATM------------ITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDS 90
Query: 230 KIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRN 289
A+ + + + I+ + E + S + + +
Sbjct: 91 SKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQF 150
Query: 290 DHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSC 349
+ H L + S+ S + + K ++
Sbjct: 151 VAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVAN 210
Query: 350 PALELKASFKASTTAIKSIEFARRGNCLLVNTG-DRLIRVYNHQEVLNAGKDGDPEPIQK 408
+ TA + N L D + V+N P
Sbjct: 211 NFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMN---------KPSDHPI 261
Query: 409 LQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIW 443
+ + + + + + + W
Sbjct: 262 IIKGAHAMSSVNSVIWLNETTIVSAGQDSN-IKFW 295
Score = 41.5 bits (95), Expect = 2e-04
Identities = 12/66 (18%), Positives = 19/66 (28%), Gaps = 9/66 (13%)
Query: 157 AVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDG 216
A G D +++W+ II H +V T + D
Sbjct: 240 ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMS---------SVNSVIWLNETTIVSAGQDS 290
Query: 217 RIVLWD 222
I W+
Sbjct: 291 NIKFWN 296
Score = 32.3 bits (71), Expect = 0.17
Identities = 9/87 (10%), Positives = 20/87 (22%), Gaps = 15/87 (17%)
Query: 83 MWKKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCIS 142
C A + +++ +W + + I+
Sbjct: 225 AKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHA---------------M 269
Query: 143 LAVTCAFNKRGTLLAVGCNDGRIVLWD 169
+V T + D I W+
Sbjct: 270 SSVNSVIWLNETTIVSAGQDSNIKFWN 296
Score = 29.2 bits (63), Expect = 1.4
Identities = 31/308 (10%), Positives = 78/308 (25%), Gaps = 33/308 (10%)
Query: 87 CCFSGDGEYVCAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVT 146
S DG+ + + + + W+ S G ++ +T
Sbjct: 18 LSSSADGKTLFSAD-AEGHINSWDISTGISNRVFPDVHAT-----------------MIT 59
Query: 147 CAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRG 206
L D + + G+ + S + A + G
Sbjct: 60 GIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANK--------LSSQPLGLAVSADG 111
Query: 207 TLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVL 266
+ C + + ++ ++ ++S + + + +V
Sbjct: 112 DIAVAACYKHIAIYSHG---KLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGA 168
Query: 267 TGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDH--QIVPIDEDSDLSI 324
+ + P+ I V F + R + +
Sbjct: 169 SVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVA 228
Query: 325 VASFDRRGQHVVTGNSKGKVLV--LSCPALELKASFKASTTAIKSIEFARRGNCLLVNTG 382
S+ + TG+ V+V ++ P+ A + + ++
Sbjct: 229 CVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQ 288
Query: 383 DRLIRVYN 390
D I+ +N
Sbjct: 289 DSNIKFWN 296
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 50.9 bits (120), Expect = 2e-07
Identities = 20/147 (13%), Positives = 41/147 (27%), Gaps = 14/147 (9%)
Query: 140 CISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVT 199
L A++++ L G+I D + + + E + A
Sbjct: 193 DEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQ 252
Query: 200 -----------CAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNG 248
+ +V+ D T H + SI+ S++
Sbjct: 253 QVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDE 311
Query: 249 --YKIISASTDNNVCIWDVLTGECEQK 273
++ D + I D +GE +
Sbjct: 312 KPLLYALSTGDKTLYIHDAESGEELRS 338
Score = 42.1 bits (97), Expect = 1e-04
Identities = 27/314 (8%), Positives = 69/314 (21%), Gaps = 39/314 (12%)
Query: 207 TLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISAST---------- 256
A + + D + +I P + + +G I AST
Sbjct: 19 NDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGER 76
Query: 257 DNNVCIWDVLTGECEQKYRFPSPILK--------VQFHPRNDHMFLVCPMRHAAVLVDTD 308
+ V ++D +T P P + AV V
Sbjct: 77 TDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDL 136
Query: 309 GDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLS----CPALELKASFKASTTA 364
+ + D + + + + +
Sbjct: 137 EGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFL 196
Query: 365 IKSIEFARRGNCLLVNTGDRLIRVYNHQE-VLNAGKDGDPEPIQKLQDLVNKTMWKKCCF 423
I ++++ L+ T I + + + D W++ +
Sbjct: 197 INHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAY 256
Query: 424 SGDGEYVCAGSARQHA---------LYIWEKSVGNLVKILHGTKGELLLDVVWHP---VR 471
+ + ++ + + + G + G + +
Sbjct: 257 HRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM--GHEIDSINVSQDEKPL 314
Query: 472 PIIASISSGVVSLW 485
S + +
Sbjct: 315 LYALSTGDKTLYIH 328
Score = 36.3 bits (82), Expect = 0.010
Identities = 20/158 (12%), Positives = 39/158 (24%), Gaps = 27/158 (17%)
Query: 160 CNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIV 219
C DG + F T G +I + + L A++++ L G+I
Sbjct: 165 CRDGSLAKVAFGTEGTPEITHTEV-----FHPEDEFLINHPAYSQKAGRLVWPTYTGKIH 219
Query: 220 LWDFLTRGIAKIISAHMHPVCSIS----------------------WSRNGYKIISASTD 257
D + + + + + +
Sbjct: 220 QIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTAS 279
Query: 258 NNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLV 295
V + D TGE K+ I + +
Sbjct: 280 RFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYA 317
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 50.4 bits (119), Expect = 3e-07
Identities = 31/322 (9%), Positives = 66/322 (20%), Gaps = 45/322 (13%)
Query: 143 LAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAF 202
V + RG + G + + D T A I + AF
Sbjct: 31 SVVATTYFSRG---SHGTRTDVVEIIDNTTLDHAGEIVIPAKHAQHVPSPYNT-----AF 82
Query: 203 NKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCI 262
+ G L V + + + + + + +
Sbjct: 83 SADGKRLYVANITPAASVTVIDAVSKKMLSEIDTAACVLAYPAGDDRFTALCESGKALTV 142
Query: 263 WDVLTGECEQKYRFPSP----ILKVQFHP-RNDHMFLVCPMRHAAVLVDTDGD--HQIVP 315
G+ ++ + + R +L D GD P
Sbjct: 143 TLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKP 202
Query: 316 IDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGN 375
+D + G +K +
Sbjct: 203 WSLLTDAERAEGWRPGGMQQTAVQAKQNRYYV------------LMHKGTDGSHKDPGTQ 250
Query: 376 CLLVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSA 435
+ + + D + ++ L + S D + + G
Sbjct: 251 VWVYDLKSKQRVARW---------DLAQQKVEPLVSIQ---------VSEDDKPLFYGLT 292
Query: 436 RQHALYIWEKSVGNLVKILHGT 457
L + + G L +
Sbjct: 293 ATSDLVVMDARTGALQHVEKQI 314
Score = 38.0 bits (87), Expect = 0.003
Identities = 22/209 (10%), Positives = 43/209 (20%), Gaps = 42/209 (20%)
Query: 88 CFSGDGEYV-CAGSARQHALYIWEKSVGNLVKILHGTKGELLLDVVEFDGALDCISLAVT 146
G+ A AL + + G K + F A
Sbjct: 121 LAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNA--------- 171
Query: 147 CAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHP----EFDGALDCISLAVTCAF 202
++ G + DF A + + A
Sbjct: 172 ---SRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAK 228
Query: 203 NKR-----------------GTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWS 245
R + + V L + + + SI S
Sbjct: 229 QNRYYVLMHKGTDGSHKDPGTQVWVYDLKSKQRVARWDLAQQKVEPLV-------SIQVS 281
Query: 246 RNG-YKIISASTDNNVCIWDVLTGECEQK 273
+ + +++ + D TG +
Sbjct: 282 EDDKPLFYGLTATSDLVVMDARTGALQHV 310
Score = 32.3 bits (72), Expect = 0.16
Identities = 16/138 (11%), Positives = 31/138 (22%), Gaps = 14/138 (10%)
Query: 220 LWDFLTRGIAKIISAHMHPVCSIS--------WSRNGYKIISASTDNNVCIWDVLTGECE 271
++D + + I P +I+ + + + + V I D T +
Sbjct: 2 VYDADAKKLLGQIDGGFGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDH- 60
Query: 272 QKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRR 331
P Q P L + D+ S +
Sbjct: 61 -AGEIVIPAKHAQHVPSPY---NTAFSADGKRLYVANITPAASVTVIDAV-SKKMLSEID 115
Query: 332 GQHVVTGNSKGKVLVLSC 349
V G +
Sbjct: 116 TAACVLAYPAGDDRFTAL 133
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 47.3 bits (111), Expect = 4e-06
Identities = 27/179 (15%), Positives = 46/179 (25%), Gaps = 18/179 (10%)
Query: 150 NKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTLL 209
+ + G+I L D ++ I K+I + G L
Sbjct: 29 DLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVH------------ISRMSASGRYL 76
Query: 210 AVGCNDGRIVLWDFLTRGIAKI-----ISAHMHPVCSISWSRNG-YKIISASTDNNVCIW 263
V D RI + D + K+ S Y I A I
Sbjct: 77 LVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIM 136
Query: 264 DVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDL 322
D T E +Q + Q + + + + + V + D+
Sbjct: 137 DGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDI 195
Score = 29.2 bits (64), Expect = 1.7
Identities = 4/110 (3%), Positives = 25/110 (22%), Gaps = 4/110 (3%)
Query: 242 ISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHA 301
++ + + D + + + + + ++ ++
Sbjct: 26 NDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARI 85
Query: 302 AVLVDTDGDHQIV----PIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVL 347
++ + V E + ++ + G +
Sbjct: 86 DMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAI 135
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 43.7 bits (101), Expect = 3e-05
Identities = 27/295 (9%), Positives = 77/295 (26%), Gaps = 23/295 (7%)
Query: 161 NDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAV-GCNDGRIV 219
I + D + + I +P + + GT + V + +
Sbjct: 10 ESDNISVIDVTSNKVTATIPVGSNP------------MGAVISPDGTKVYVANAHSNDVS 57
Query: 220 LWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPSP 279
+ D T + + A P ++ + + + D + +
Sbjct: 58 IIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKS 117
Query: 280 ILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGN 339
L + P +++ +++T I + +A + V
Sbjct: 118 PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANF 177
Query: 340 SKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCLLVNTGDRLIRVYNHQEVLNAGK 399
+ V+ + + K T + V + ++
Sbjct: 178 DSMSISVIDTVTNSVIDTVKVEA-------APSGIAVNPEGTKAYVTNVDKYFNTVSMID 230
Query: 400 DGDPEPIQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYIWEKSVGNLVKIL 454
G + ++ V + DG+ V + + + + + + + +
Sbjct: 231 TGTNKITARIP--VGPDPAG-IAVTPDGKKVYVALSFCNTVSVIDTATNTITATM 282
Score = 37.9 bits (86), Expect = 0.002
Identities = 16/75 (21%), Positives = 26/75 (34%), Gaps = 9/75 (12%)
Query: 221 WDFLTRGIAKIISAHMHPVCSISWSRNGYKI-ISASTDNNVCIWDVLTGECEQKYRFPSP 279
D T I I P I+ + +G K+ ++ S N V + D T
Sbjct: 229 IDTGTNKITARIPVGPDPA-GIAVTPDGKKVYVALSFCNTVSVIDTATNTITAT------ 281
Query: 280 ILKVQFHPRNDHMFL 294
+ V +P F+
Sbjct: 282 -MAVGKNPYASGQFI 295
Score = 36.8 bits (83), Expect = 0.006
Identities = 9/64 (14%), Positives = 25/64 (39%)
Query: 249 YKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTD 308
+ I+ S +N+ + DV + + S + P +++ + ++DT
Sbjct: 3 FAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTA 62
Query: 309 GDHQ 312
++
Sbjct: 63 TNNV 66
Score = 26.8 bits (57), Expect = 9.4
Identities = 3/33 (9%), Positives = 13/33 (39%)
Query: 88 CFSGDGEYVCAGSARQHALYIWEKSVGNLVKIL 120
+ DG+ V + + + + + + + +
Sbjct: 250 AVTPDGKKVYVALSFCNTVSVIDTATNTITATM 282
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 42.3 bits (98), Expect = 1e-04
Identities = 13/137 (9%), Positives = 33/137 (24%), Gaps = 13/137 (9%)
Query: 145 VTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNK 204
N G L+ + + I + + A K
Sbjct: 215 QAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMV-AKLK 273
Query: 205 RGTLLAVGCNDG---------RIVLWDFLTRGIAKIISAHMHPVCSISWSRNG--YKIIS 253
+ + + + IS H +I +++G +
Sbjct: 274 NTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG-HDSDAIIAAQDGASDNYAN 332
Query: 254 ASTDNNVCIWDVLTGEC 270
++ + I+D + +
Sbjct: 333 SAGTEVLDIYDAASDQD 349
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 33.3 bits (74), Expect = 0.073
Identities = 28/309 (9%), Positives = 74/309 (23%), Gaps = 27/309 (8%)
Query: 154 TLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGC 213
T+ +I +W+ G + P + + L VG
Sbjct: 5 TVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPM---------VVSPDKRYLYVGV 55
Query: 214 -NDGRIVLWDFLTRGIAKIISAHMHP---VCSISWSRNGYKIISASTDNNVCIW------ 263
+ R++ + A +A + IS G + S +
Sbjct: 56 RPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDG 115
Query: 264 -DVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDG-----DHQIVPID 317
V + + + L + D ++ ++
Sbjct: 116 LPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVE 175
Query: 318 EDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCL 377
+V + + + V + + + ++ R +
Sbjct: 176 GAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI 235
Query: 378 LVNTGDRLIRVYNHQEVLNAGKDGDPE-PIQKLQDLVNKTMWKKC-CFSGDGEYVCAGSA 435
+ R + + L + + + + G+Y+ A
Sbjct: 236 HITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQ 295
Query: 436 RQHALYIWE 444
+ H + ++E
Sbjct: 296 KSHHISVYE 304
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue
{Nostoc punctiforme [TaxId: 272131]}
Length = 302
Score = 33.1 bits (74), Expect = 0.083
Identities = 39/271 (14%), Positives = 73/271 (26%), Gaps = 18/271 (6%)
Query: 201 AFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNV 260
A GT+ G IV G +I + V ++++ NG + + +++
Sbjct: 34 ASAPDGTIFVTNHEVGEIVSIT--PDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSI 91
Query: 261 CIW--DVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDE 318
+ G E P I P +D +L A+ + E
Sbjct: 92 PVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLE 151
Query: 319 DSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFARRGNCL- 377
L+ S + V + + L ST E +
Sbjct: 152 HPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNID 211
Query: 378 ---LVNTGDRLIRVYNHQEVLNAGKDGDPEPIQKLQD-LVNKTMWKKCCFSGDGE----- 428
G+ + + V+ D I + + ++ T F
Sbjct: 212 DFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTA---VAFGQTEGDCTAI 268
Query: 429 YVCAGSARQHALYIWEKSVGNLVKILHGTKG 459
YV + N+V++ G G
Sbjct: 269 YVVT-NGGMFLPPPTGVVPANVVRLEVGKPG 298
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus
[TaxId: 1280]}
Length = 319
Score = 32.0 bits (71), Expect = 0.18
Identities = 13/99 (13%), Positives = 29/99 (29%)
Query: 201 AFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNV 260
F+++G L + +G I + T+ I + +H +I ++G + D
Sbjct: 46 NFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKS 105
Query: 261 CIWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMR 299
E + L + +
Sbjct: 106 TGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFY 144
Score = 30.4 bits (67), Expect = 0.56
Identities = 31/256 (12%), Positives = 65/256 (25%), Gaps = 26/256 (10%)
Query: 148 AFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAH------MHPEFDGALDCISLAVTCA 201
F+++G L + +G I + T+ I + +H + DG L L
Sbjct: 46 NFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLG---D 102
Query: 202 FNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNVC 261
F G + A N + I ++ + V
Sbjct: 103 FKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP--LGGVY 160
Query: 262 IWDVLTGECEQKYRFPSPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQ--------I 313
+ S + +++ + + + D I
Sbjct: 161 YVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATI 220
Query: 314 VPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPA------LELKASFKASTTAIKS 367
+ D V +G+VLV + + + +
Sbjct: 221 PYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFN-KRGYPIGQILIPGRDEGHMLRSTH 279
Query: 368 IEFARRGNCLLVNTGD 383
+F N L++ + D
Sbjct: 280 PQFIPGTNQLIICSND 295
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 31.8 bits (72), Expect = 0.23
Identities = 16/138 (11%), Positives = 36/138 (26%), Gaps = 9/138 (6%)
Query: 201 AFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIISASTDNNV 260
FN N+ + +L + H H + Y I+ + V
Sbjct: 39 VFNVDSATGWGITNESKEILGG--DQQYLNGDCHHPHISMTDGRYDGKYLFINDKANTRV 96
Query: 261 CIWDVLTGECEQKYRFP--SPILKVQFHPRNDHMFLVCPMRHAAVLVDTDGDHQIVPIDE 318
+ + ++ P I ++ ++ C + D
Sbjct: 97 ARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTD-----FSL 151
Query: 319 DSDLSIVASFDRRGQHVV 336
D+ ++ + D V
Sbjct: 152 DNSYTMFTAIDAETMDVA 169
>d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 401
Score = 30.2 bits (66), Expect = 0.86
Identities = 33/251 (13%), Positives = 67/251 (26%), Gaps = 21/251 (8%)
Query: 141 ISLAVTCAFNKRGTLLAVGCND-GRIVLWDFLTRGIAKIISAHMHPEFDGALDCISLAV- 198
+ ++ + G +L +G D G++ G+ + + P + + A
Sbjct: 3 VKVSHRSHSTEPGLVLTLGQGDVGQL--------GLGENVMERKKPALVSIPEDVVQAEA 54
Query: 199 ----TCAFNKRGTLLAVGCND-GRIVLWDFLTRGIAKIISAHMHPVCSISWSRNGYKIIS 253
T +K G + + GCND G + + + + + +
Sbjct: 55 GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAAL 114
Query: 254 ASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHPRND-HMFLVCPMRHAAVLVDTDGDHQ 312
P V + D + V V++ DGD
Sbjct: 115 TDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLY 174
Query: 313 IVPIDEDSDLSIVASFDRRGQHVVTGNSKGKVLVLSCPALELKASFKASTTAIKSIEFAR 372
+ E L V G +G +L + LK+ +
Sbjct: 175 TLGCGEQGQLGRVPELFAN-----RGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGA 229
Query: 373 RGNCLLVNTGD 383
+ + G
Sbjct: 230 YFTFAISHEGH 240
>d1rzhh1 b.41.1.1 (H:36-248) Photosynthetic reaction centre
{Rhodobacter sphaeroides [TaxId: 1063]}
Length = 213
Score = 29.4 bits (66), Expect = 1.1
Identities = 8/45 (17%), Positives = 17/45 (37%)
Query: 297 PMRHAAVLVDTDGDHQIVPIDEDSDLSIVASFDRRGQHVVTGNSK 341
R +D G ++I P+ + + A + G V + +
Sbjct: 80 VARRDLPELDGHGHNKIKPMKAAAGFHVSAGKNPIGLPVRGCDLE 124
>d1k9vf_ c.23.16.1 (F:) GAT subunit, HisH, (or domain) of
imidazoleglycerolphosphate synthase HisF {Thermotoga
maritima [TaxId: 2336]}
Length = 200
Score = 26.9 bits (58), Expect = 6.7
Identities = 17/111 (15%), Positives = 31/111 (27%), Gaps = 5/111 (4%)
Query: 182 HMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCS 241
+ + + + + + A G ++ + + ++ + V
Sbjct: 69 FVRKHVEDERYVVGVCLGMQLLFEESEEAPGVKGLSLIEGNVVKLRSRRLPHMGWNEVIF 128
Query: 242 ISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPS-----PILKVQFHP 287
NGY + VL FPS IL QFHP
Sbjct: 129 KDTFPNGYYYFVHTYRAVCEEEHVLGTTEYDGEIFPSAVRKGRILGFQFHP 179
>d1laue_ c.18.1.1 (E:) Uracil-DNA glycosylase {Herpes simplex virus
type 1 [TaxId: 10298]}
Length = 228
Score = 27.0 bits (59), Expect = 7.2
Identities = 10/81 (12%), Positives = 23/81 (28%)
Query: 182 HMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRGIAKIISAHMHPVCS 241
G L+ + N T+ + WD G+ + ++A +
Sbjct: 110 EARMSGHGCLEKWARDGVLLLNTTLTVKRGAAASHSRIGWDRFVGGVIRRLAARRPGLVF 169
Query: 242 ISWSRNGYKIISASTDNNVCI 262
+ W + I + +
Sbjct: 170 MLWGTHAQNAIRPDPRVHCVL 190
>d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 196
Score = 26.4 bits (57), Expect = 8.2
Identities = 18/120 (15%), Positives = 33/120 (27%), Gaps = 6/120 (5%)
Query: 168 WDFLTRGIAKIISAHMHPEFDGALDCISLAVTCAFNKRGTLLAVGCNDGRIVLWDFLTRG 227
D + + + C+ + A G+ + +
Sbjct: 55 IDEELDKLGSVGKYIDDHNYPILGICVGAQFIALHFGASVVKAKHPEFGKTKVSVMHSEN 114
Query: 228 IAKIISAHMHPVCSISWSRNGYKIISASTDNNVCIWDVLTGECEQKYRFPSPILKVQFHP 287
I + P W + +II+ D+ T + + Y PI QFHP
Sbjct: 115 IFGGL-----PSEITVWENHNDEIINLP-DDFTLAASSATCQVQGFYHKTRPIYATQFHP 168
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.136 0.417
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,381,937
Number of extensions: 114380
Number of successful extensions: 564
Number of sequences better than 10.0: 1
Number of HSP's gapped: 422
Number of HSP's successfully gapped: 111
Length of query: 622
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 531
Effective length of database: 1,158,166
Effective search space: 614986146
Effective search space used: 614986146
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)