BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2111
(63 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307204655|gb|EFN83277.1| Inner nuclear membrane protein Man1 [Harpegnathos saltator]
Length = 834
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 41/55 (74%)
Query: 7 EKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQ 61
E +AYR LHG WF+ LVTVKYLR ERYHERFP A V PLKPSN++R S+Q
Sbjct: 769 EDAGKAYRALHGCWFDGNLVTVKYLRLERYHERFPDAARCVTPLKPSNNQRLSMQ 823
>gi|383855184|ref|XP_003703097.1| PREDICTED: inner nuclear membrane protein Man1-like [Megachile
rotundata]
Length = 822
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 41/55 (74%)
Query: 7 EKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQ 61
E +AYR LHG WF+ LVTVKYLR ERYHERFP A+ PLKPSN++R S+Q
Sbjct: 765 EDAGKAYRALHGCWFDGHLVTVKYLRLERYHERFPDARRCTTPLKPSNNQRLSMQ 819
>gi|307189393|gb|EFN73803.1| Inner nuclear membrane protein Man1 [Camponotus floridanus]
Length = 231
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 40/50 (80%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQ 61
AYR LHG WF+ KLVTVKYLR ERYHERFP A + PLKPSN++R SLQ
Sbjct: 171 AYRALHGCWFDGKLVTVKYLRLERYHERFPDAARCITPLKPSNNQRLSLQ 220
>gi|332026251|gb|EGI66390.1| Inner nuclear membrane protein Man1 [Acromyrmex echinatior]
Length = 832
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 41/55 (74%)
Query: 7 EKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQ 61
E +AYR LHG WF+ LVTVKYLR ERYHERFP A V PLKPSN++R S+Q
Sbjct: 767 EDAGKAYRALHGCWFDGNLVTVKYLRLERYHERFPDAARCVTPLKPSNNQRLSMQ 821
>gi|322787987|gb|EFZ13828.1| hypothetical protein SINV_07462 [Solenopsis invicta]
Length = 824
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 41/55 (74%)
Query: 7 EKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQ 61
E +AYR LHG WF+ LVTVKYLR ERYHERFP A V PLKPSN++R S+Q
Sbjct: 759 EDAGKAYRALHGCWFDGNLVTVKYLRLERYHERFPDAARCVTPLKPSNNQRLSMQ 813
>gi|350417932|ref|XP_003491651.1| PREDICTED: inner nuclear membrane protein Man1-like [Bombus
impatiens]
Length = 826
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 7 EKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQ 61
E +AYR LHG WF+ LVTVKYLR ERY+ERFP A+ PLKPSN++R S+Q
Sbjct: 769 EDAGKAYRALHGCWFDGHLVTVKYLRLERYYERFPDARRCTTPLKPSNNQRLSMQ 823
>gi|380019524|ref|XP_003693654.1| PREDICTED: uncharacterized protein LOC100863894 [Apis florea]
Length = 656
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 7 EKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQ 61
E +AYR LHG WF+ LVTVKYLR ERY+ERFP A+ PLKPSN++R S+Q
Sbjct: 599 EDAGKAYRALHGCWFDGHLVTVKYLRLERYYERFPDARRCTTPLKPSNNQRLSMQ 653
>gi|241577756|ref|XP_002403644.1| LEM domain-containing protein, putative [Ixodes scapularis]
gi|215500245|gb|EEC09739.1| LEM domain-containing protein, putative [Ixodes scapularis]
Length = 660
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 41/57 (71%)
Query: 7 EKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQQA 63
E +AYR LHG+WF+ L+TVKYLR ERYHERFP+++ PLKPSN R SL +
Sbjct: 596 EAAGQAYRALHGSWFDGNLITVKYLRLERYHERFPESQYCREPLKPSNSLRLSLDAS 652
>gi|328702358|ref|XP_001952027.2| PREDICTED: inner nuclear membrane protein Man1-like [Acyrthosiphon
pisum]
Length = 597
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQ 61
+AYR LHG W++ KLVTVK+LR ERYH+RFP A ++ PL PSN+ + SLQ
Sbjct: 547 KAYRQLHGFWYDGKLVTVKFLRLERYHQRFPDAVSMTIPLTPSNNEKRSLQ 597
>gi|242009110|ref|XP_002425335.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212509120|gb|EEB12597.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 788
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/50 (64%), Positives = 38/50 (76%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQ 61
AYR LHG+WF+ L+TVKYLR ERYHERFP + PL+PSN+ R SLQ
Sbjct: 732 AYRQLHGSWFDGALITVKYLRLERYHERFPDSTYARTPLRPSNNLRLSLQ 781
>gi|395852135|ref|XP_003798596.1| PREDICTED: inner nuclear membrane protein Man1 [Otolemur garnettii]
Length = 823
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA + PLKPSN SL
Sbjct: 758 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALSCSTPLKPSNKHLSSL 807
>gi|213626877|gb|AAI70315.1| XMAN1 protein [Xenopus laevis]
Length = 782
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN SL
Sbjct: 717 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCSTPLKPSNTHMNSL 766
>gi|148225084|ref|NP_001082578.1| LEM domain containing 3 [Xenopus laevis]
gi|29335751|dbj|BAC66442.1| nuclear membrane protein XMAN1 [Xenopus laevis]
Length = 781
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN SL
Sbjct: 716 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCSTPLKPSNTHMNSL 765
>gi|161611706|gb|AAI55877.1| XMAN1 protein [Xenopus laevis]
Length = 769
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN SL
Sbjct: 704 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCSTPLKPSNTHMNSL 753
>gi|148238114|ref|NP_001090173.1| Smad1 antagonistic effector [Xenopus laevis]
gi|56849616|gb|AAN75632.2|AF115498_1 Smad1 antagonistic effector [Xenopus laevis]
Length = 784
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN SL
Sbjct: 719 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCSTPLKPSNTHMNSL 768
>gi|217416470|ref|NP_001136130.1| LEM domain containing 3 [Xenopus (Silurana) tropicalis]
gi|195539984|gb|AAI68025.1| Unknown (protein for MGC:185086) [Xenopus (Silurana) tropicalis]
Length = 781
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN SL
Sbjct: 716 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQAFTCNTPLKPSNTHMNSL 765
>gi|390343323|ref|XP_786690.3| PREDICTED: uncharacterized protein LOC581609 [Strongylocentrotus
purpuratus]
Length = 909
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 41/56 (73%)
Query: 7 EKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQQ 62
EK A+R L G+WF+ KLVTVKY++ +RYH+RFP A + + LKPSN+ R SLQ
Sbjct: 844 EKAGMAFRCLQGSWFDGKLVTVKYIKLDRYHQRFPSALGVTSLLKPSNNLRMSLQS 899
>gi|326911524|ref|XP_003202108.1| PREDICTED: inner nuclear membrane protein Man1-like [Meleagris
gallopavo]
Length = 602
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 537 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPSNKHMNSM 586
>gi|426226743|ref|XP_004023301.1| PREDICTED: LOW QUALITY PROTEIN: inner nuclear membrane protein Man1
[Ovis aries]
Length = 946
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 881 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPSNKHMNSM 930
>gi|355699197|gb|AES01049.1| LEM domain containing 3 [Mustela putorius furo]
Length = 93
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQQ 62
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 28 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPSNKHMNSMSH 79
>gi|363727624|ref|XP_416073.3| PREDICTED: inner nuclear membrane protein Man1, partial [Gallus
gallus]
Length = 498
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQQ 62
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 433 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPSNKHMNSMSH 484
>gi|327273069|ref|XP_003221305.1| PREDICTED: inner nuclear membrane protein Man1-like [Anolis
carolinensis]
Length = 814
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQQ 62
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 749 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQAVNCSVPLKPSNTHMNSMSH 800
>gi|311255865|ref|XP_003126400.1| PREDICTED: inner nuclear membrane protein Man1 [Sus scrofa]
Length = 911
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 846 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPSNKHMNSM 895
>gi|301769359|ref|XP_002920095.1| PREDICTED: LOW QUALITY PROTEIN: inner nuclear membrane protein
Man1-like [Ailuropoda melanoleuca]
Length = 889
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 824 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPSNKHMNSM 873
>gi|359320580|ref|XP_850494.3| PREDICTED: inner nuclear membrane protein Man1 [Canis lupus
familiaris]
Length = 739
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQQ 62
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 674 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPSNKHMNSMSH 725
>gi|431892018|gb|ELK02465.1| Inner nuclear membrane protein Man1 [Pteropus alecto]
Length = 914
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 849 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPSNKHMNSM 898
>gi|300794187|ref|NP_001179628.1| inner nuclear membrane protein Man1 [Bos taurus]
Length = 912
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 847 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPSNKHMNSM 896
>gi|291389501|ref|XP_002711288.1| PREDICTED: LEM domain containing 3 [Oryctolagus cuniculus]
Length = 915
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 850 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPSNKHMNSM 899
>gi|410965044|ref|XP_003989062.1| PREDICTED: inner nuclear membrane protein Man1 [Felis catus]
Length = 865
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 800 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPSNKHMNSM 849
>gi|296487609|tpg|DAA29722.1| TPA: LEM domain containing 3 [Bos taurus]
Length = 880
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 815 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPSNKHMNSM 864
>gi|354469547|ref|XP_003497190.1| PREDICTED: inner nuclear membrane protein Man1, partial [Cricetulus
griseus]
Length = 546
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQQ 62
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 481 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPSNKHMNSMSH 532
>gi|344267550|ref|XP_003405629.1| PREDICTED: LOW QUALITY PROTEIN: inner nuclear membrane protein
Man1-like [Loxodonta africana]
Length = 914
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 849 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPSNKHMNSM 898
>gi|449481582|ref|XP_004176154.1| PREDICTED: LOW QUALITY PROTEIN: inner nuclear membrane protein Man1
[Taeniopygia guttata]
Length = 1081
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 1016 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPSNKHMNSM 1065
>gi|395537972|ref|XP_003770962.1| PREDICTED: inner nuclear membrane protein Man1 [Sarcophilus
harrisii]
Length = 597
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQQ 62
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 532 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNVPLKPSNKHMNSMSH 583
>gi|297714704|ref|XP_002833771.1| PREDICTED: inner nuclear membrane protein Man1-like, partial [Pongo
abelii]
Length = 115
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQQ 62
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 50 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTSNTPLKPSNKHMNSMSH 101
>gi|427796261|gb|JAA63582.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 687
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 1 MGEVGWEKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
M E +AYR+LHG+WF+ L+TVKYLR ERYH+RFP+A+ L+PSN R S+
Sbjct: 616 MKCASLESAGQAYRSLHGSWFDGNLITVKYLRLERYHDRFPEARYCRFSLRPSNSLRLSM 675
Query: 61 QQA 63
+
Sbjct: 676 DSS 678
>gi|148692462|gb|EDL24409.1| mCG10117 [Mus musculus]
Length = 854
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQQ 62
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKP+N SL
Sbjct: 789 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPANKHMNSLSH 840
>gi|145864461|ref|NP_001074662.2| inner nuclear membrane protein Man1 [Mus musculus]
Length = 918
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKP+N SL
Sbjct: 853 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPANKHMNSL 902
>gi|296212258|ref|XP_002752754.1| PREDICTED: inner nuclear membrane protein Man1 [Callithrix jacchus]
Length = 911
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 846 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTSNTPLKPSNKHMNSM 895
>gi|152031637|sp|Q9WU40.2|MAN1_MOUSE RecName: Full=Inner nuclear membrane protein Man1; AltName:
Full=LEM domain-containing protein 3
Length = 921
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKP+N SL
Sbjct: 856 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPANKHMNSL 905
>gi|345322102|ref|XP_001510437.2| PREDICTED: inner nuclear membrane protein Man1 [Ornithorhynchus
anatinus]
Length = 660
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/56 (55%), Positives = 38/56 (67%)
Query: 7 EKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQQ 62
E +A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 343 EYAGKAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALNCNTPLKPSNKHMNSMSH 398
>gi|403269456|ref|XP_003926754.1| PREDICTED: inner nuclear membrane protein Man1 [Saimiri boliviensis
boliviensis]
Length = 888
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 823 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTSNTPLKPSNKHMNSM 872
>gi|384475755|ref|NP_001245023.1| inner nuclear membrane protein Man1 [Macaca mulatta]
gi|383417137|gb|AFH31782.1| inner nuclear membrane protein Man1 isoform 1 [Macaca mulatta]
Length = 909
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 844 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTSNTPLKPSNKHMNSM 893
>gi|380811242|gb|AFE77496.1| inner nuclear membrane protein Man1 isoform 1 [Macaca mulatta]
Length = 909
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 844 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTSNTPLKPSNKHMNSM 893
>gi|90082992|dbj|BAE90578.1| unnamed protein product [Macaca fascicularis]
Length = 437
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 372 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTSNTPLKPSNKHMNSM 421
>gi|402886733|ref|XP_003906776.1| PREDICTED: inner nuclear membrane protein Man1 [Papio anubis]
Length = 911
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 846 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTSNTPLKPSNKHMNSM 895
>gi|355564435|gb|EHH20935.1| LEM domain-containing protein 3 [Macaca mulatta]
Length = 881
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 816 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTSNTPLKPSNKHMNSM 865
>gi|397508832|ref|XP_003824844.1| PREDICTED: inner nuclear membrane protein Man1 [Pan paniscus]
Length = 912
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 847 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTSNTPLKPSNKHMNSM 896
>gi|114643964|ref|XP_509197.2| PREDICTED: inner nuclear membrane protein Man1 [Pan troglodytes]
gi|410218506|gb|JAA06472.1| LEM domain containing 3 [Pan troglodytes]
gi|410250732|gb|JAA13333.1| LEM domain containing 3 [Pan troglodytes]
gi|410304950|gb|JAA31075.1| LEM domain containing 3 [Pan troglodytes]
gi|410333271|gb|JAA35582.1| LEM domain containing 3 [Pan troglodytes]
Length = 911
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 846 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTSNTPLKPSNKHMNSM 895
>gi|264681410|ref|NP_001161086.1| inner nuclear membrane protein Man1 isoform 2 [Homo sapiens]
gi|8132534|gb|AAF73293.1| inner nuclear membrane protein [Homo sapiens]
Length = 910
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 845 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTSNTPLKPSNKHMNSM 894
>gi|218675729|gb|AAI69303.2| LEM domain containing 3 [synthetic construct]
Length = 282
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKP+N SL
Sbjct: 217 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPANKHMNSL 266
>gi|441627665|ref|XP_004089289.1| PREDICTED: LOW QUALITY PROTEIN: inner nuclear membrane protein Man1
[Nomascus leucogenys]
Length = 754
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 689 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTSNTPLKPSNKHMNSM 738
>gi|7706607|ref|NP_055134.2| inner nuclear membrane protein Man1 isoform 1 [Homo sapiens]
gi|426373324|ref|XP_004053556.1| PREDICTED: inner nuclear membrane protein Man1 [Gorilla gorilla
gorilla]
gi|13629600|sp|Q9Y2U8.2|MAN1_HUMAN RecName: Full=Inner nuclear membrane protein Man1; AltName:
Full=LEM domain-containing protein 3
gi|7657560|gb|AAD31593.2|AF112299_1 integral inner nuclear membrane protein MAN1 [Homo sapiens]
gi|119617554|gb|EAW97148.1| LEM domain containing 3, isoform CRA_a [Homo sapiens]
gi|119617555|gb|EAW97149.1| LEM domain containing 3, isoform CRA_a [Homo sapiens]
gi|189442432|gb|AAI67864.1| LEM domain containing 3 [synthetic construct]
Length = 911
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 846 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTSNTPLKPSNKHMNSM 895
>gi|432943324|ref|XP_004083159.1| PREDICTED: inner nuclear membrane protein Man1-like [Oryzias
latipes]
Length = 804
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 40/53 (75%)
Query: 7 EKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYS 59
E +A++ LHG+WF+ KLVTVKYLR +RYH+RFPQA+A PLK S+ R S
Sbjct: 741 EHSGKAFKALHGSWFDGKLVTVKYLRLDRYHQRFPQAQACSTPLKASSLRLSS 793
>gi|300253233|ref|NP_001177929.1| inner nuclear membrane protein Man1 [Rattus norvegicus]
Length = 914
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPS+ S+
Sbjct: 849 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCSTPLKPSDKHMNSM 898
>gi|194380010|dbj|BAG58357.1| unnamed protein product [Homo sapiens]
Length = 268
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 203 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTSNTPLKPSNKHMNSM 252
>gi|149066827|gb|EDM16560.1| rCG49122 [Rattus norvegicus]
Length = 385
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPS+ S+
Sbjct: 320 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCSTPLKPSDKHMNSM 369
>gi|432093893|gb|ELK25746.1| Inner nuclear membrane protein Man1 [Myotis davidii]
Length = 591
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 36/52 (69%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQQ 62
+A++ LHG+WF+ KLVTVKYLR +RYH RFP A PLKPSN S+
Sbjct: 526 KAFKALHGSWFDGKLVTVKYLRLDRYHHRFPHALTCNTPLKPSNKHMNSMSH 577
>gi|321478590|gb|EFX89547.1| hypothetical protein DAPPUDRAFT_303235 [Daphnia pulex]
Length = 250
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 37/51 (72%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQ 61
+ Y +LHG WF+ LVTVKYLR ERYH RFP + A L+PSND+R SLQ
Sbjct: 189 KVYHSLHGWWFDGNLVTVKYLRPERYHYRFPDSAKATAQLQPSNDKRLSLQ 239
>gi|6808208|emb|CAB70796.1| hypothetical protein [Homo sapiens]
Length = 198
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/56 (55%), Positives = 38/56 (67%)
Query: 7 EKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQQ 62
E +A++ LHG+WF+ KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 129 EYAGKAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTSNTPLKPSNKHMNSMSH 184
>gi|74180096|dbj|BAE24418.1| unnamed protein product [Mus musculus]
Length = 413
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
+A++ HG+WF+ KLVTVKYLR +RYH RFPQA PLKP+N SL
Sbjct: 348 KAFKAFHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPANKHMNSL 397
>gi|410918438|ref|XP_003972692.1| PREDICTED: inner nuclear membrane protein Man1-like [Takifugu
rubripes]
Length = 835
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 7 EKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
E +A++ LHG+WF+ KLVTVKYLR +RYH+RFPQA A PL+ S
Sbjct: 775 ESSGKAFKALHGSWFDGKLVTVKYLRLDRYHQRFPQAHACSTPLRAS 821
>gi|348536441|ref|XP_003455705.1| PREDICTED: inner nuclear membrane protein Man1-like [Oreochromis
niloticus]
Length = 844
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 35/43 (81%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
+A++ LHG+WF+ KLVTVKYLR +RYH+RFPQA+ PLK S
Sbjct: 777 KAFKALHGSWFDGKLVTVKYLRLDRYHQRFPQAQGCSTPLKAS 819
>gi|190339133|gb|AAI63283.1| Lemd3 protein [Danio rerio]
Length = 812
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 35/46 (76%)
Query: 7 EKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKP 52
E +A++ LHG+WF+ KLVTVKYLR +RYH+RFPQA PLKP
Sbjct: 742 EHSGKAFKALHGSWFDGKLVTVKYLRLDRYHQRFPQALGSNTPLKP 787
>gi|113679806|ref|NP_001038329.1| inner nuclear membrane protein Man1 [Danio rerio]
gi|197246679|gb|AAI68502.1| LEM domain containing 3 [Danio rerio]
Length = 841
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 35/46 (76%)
Query: 7 EKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKP 52
E +A++ LHG+WF+ KLVTVKYLR +RYH+RFPQA PLKP
Sbjct: 771 EHSGKAFKALHGSWFDGKLVTVKYLRLDRYHQRFPQALGSNTPLKP 816
>gi|443695480|gb|ELT96378.1| hypothetical protein CAPTEDRAFT_184728 [Capitella teleta]
Length = 202
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 34/54 (62%)
Query: 7 EKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
E RA+ LHG WF+ L+TVK+LR ERY+ERFP A PL PSN SL
Sbjct: 137 EASGRAFHALHGWWFDGILITVKFLRLERYYERFPDAIGCTQPLIPSNSEGNSL 190
>gi|321457280|gb|EFX68370.1| hypothetical protein DAPPUDRAFT_260220 [Daphnia pulex]
gi|321461100|gb|EFX72135.1| hypothetical protein DAPPUDRAFT_254864 [Daphnia pulex]
Length = 202
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRR 57
+ Y+ LHG WF+ LVTVKYL ERY RFP + PL+PSND+R
Sbjct: 156 KVYQLLHGWWFDGNLVTVKYLSPERYQYRFPDSVKATFPLQPSNDKR 202
>gi|391325527|ref|XP_003737284.1| PREDICTED: inner nuclear membrane protein Man1-like [Metaseiulus
occidentalis]
Length = 622
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 13 YRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
Y LHG+WF+ +LVT KYLR ERYHE+FP + V P++ S
Sbjct: 582 YHKLHGSWFDGRLVTAKYLREERYHEKFPDSIGCVRPIQVS 622
>gi|339239415|ref|XP_003381262.1| putative LEM domain protein [Trichinella spiralis]
gi|316975720|gb|EFV59122.1| putative LEM domain protein [Trichinella spiralis]
Length = 720
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 1 MGEVGWEKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLK 51
M E+ A++TLHG+WFN +LV VK+LR ERY++RFP+A P++
Sbjct: 655 MKMASLEEASDAFKTLHGSWFNGRLVYVKFLRPERYNKRFPEAMNASDPIR 705
>gi|357606332|gb|EHJ65024.1| putative nuclear membrane protein XMAN1 [Danaus plexippus]
Length = 760
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 13 YRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRR 57
Y+ LHG W+ +L+TVKYLR ERY +RFP + + LKPS RR
Sbjct: 712 YKNLHGWWYEGRLITVKYLRLERYMQRFPGSPSSGFYLKPSRLRR 756
>gi|221110532|ref|XP_002168667.1| PREDICTED: inner nuclear membrane protein Man1-like [Hydra
magnipapillata]
Length = 727
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 7 EKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
E R+A+R+++G WF+ +LV VK++ RYH+RFP A V L PS
Sbjct: 669 ESARKAFRSMYGNWFDGRLVIVKFVTLARYHQRFPDALKCVQALSPS 715
>gi|156386174|ref|XP_001633788.1| predicted protein [Nematostella vectensis]
gi|156220863|gb|EDO41725.1| predicted protein [Nematostella vectensis]
Length = 343
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
A+++LHG WF+ +LV VKYL +RYH+RFP A L+PS SL
Sbjct: 275 AFKSLHGCWFDGRLVAVKYLTLKRYHQRFPVALYATEALRPSGRSPSSL 323
>gi|198424560|ref|XP_002120220.1| PREDICTED: similar to LEM domain containing 3 [Ciona intestinalis]
Length = 710
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYS 59
+ +R+LHG+WF+ +LVTVK++ R+H +P L PL PS+ + S
Sbjct: 644 QVFRSLHGSWFDGRLVTVKFISLNRFHSHYPSTVNLTTPLTPSSSKPTS 692
>gi|349603177|gb|AEP99090.1| Inner nuclear membrane protein Man1-like protein, partial [Equus
caballus]
Length = 54
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 26/39 (66%)
Query: 24 KLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQQ 62
KLVTVKYLR +RYH RFPQA PLKPSN S+
Sbjct: 2 KLVTVKYLRLDRYHHRFPQALTCNTPLKPSNTHMNSMSH 40
>gi|324508537|gb|ADY43604.1| Inner nuclear membrane protein Man1 [Ascaris suum]
Length = 653
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 10 RRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQA 43
+ A+ TLHG WFN +LV+ KYLR ERY +RFP A
Sbjct: 616 KDAFTTLHGTWFNGQLVSAKYLRDERYEQRFPHA 649
>gi|312376524|gb|EFR23582.1| hypothetical protein AND_12642 [Anopheles darlingi]
Length = 1011
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQQ 62
++G WF+++LV++K+LR ERY +RFP++ A A LKPSN S+
Sbjct: 875 INGWWFDNRLVSIKFLRLERYQQRFPRSLAGPACLKPSNKSNSSMSH 921
>gi|158285685|ref|XP_308417.4| AGAP007422-PB [Anopheles gambiae str. PEST]
gi|157020112|gb|EAA04379.4| AGAP007422-PB [Anopheles gambiae str. PEST]
Length = 750
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQQ 62
++G WF+++LV++K+LR ERY +RFP++ A A LKPSN S+
Sbjct: 616 INGWWFDNRLVSIKFLRLERYLQRFPRSLAGPACLKPSNKNNSSMSH 662
>gi|158285683|ref|XP_001687932.1| AGAP007422-PA [Anopheles gambiae str. PEST]
gi|157020111|gb|EDO64581.1| AGAP007422-PA [Anopheles gambiae str. PEST]
Length = 1036
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQQ 62
++G WF+++LV++K+LR ERY +RFP++ A A LKPSN S+
Sbjct: 902 INGWWFDNRLVSIKFLRLERYLQRFPRSLAGPACLKPSNKNNSSMSH 948
>gi|157118607|ref|XP_001659175.1| hypothetical protein AaeL_AAEL001416 [Aedes aegypti]
gi|108883237|gb|EAT47462.1| AAEL001416-PA [Aedes aegypti]
Length = 856
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQQ 62
++G WF+++LV++K+LR ERY RFP++ A LKPSN S+ Q
Sbjct: 775 INGWWFDNRLVSIKFLRLERYLARFPRSSAGPVCLKPSNRNNSSMSQ 821
>gi|170056775|ref|XP_001864183.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876470|gb|EDS39853.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 853
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSLQQA 63
++G WF+++LV++K+LR ERY RFP+A A A LKPSN S+ A
Sbjct: 778 INGWWFDNRLVSIKFLRLERYLSRFPRALAGPACLKPSNRHNSSMPAA 825
>gi|189238310|ref|XP_971861.2| PREDICTED: similar to AGAP003323-PA [Tribolium castaneum]
Length = 1908
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKA 45
AYR LHG W+ LVTVKY+R ERY +RFP + +
Sbjct: 996 AYRNLHGWWYAGNLVTVKYVRLERYMQRFPDSPS 1029
>gi|170586070|ref|XP_001897804.1| LEM domain containing protein [Brugia malayi]
gi|158594828|gb|EDP33407.1| LEM domain containing protein [Brugia malayi]
Length = 524
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 25/32 (78%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQA 43
A+++LHG WFN +LV K+LR ERY +RFP A
Sbjct: 490 AFKSLHGTWFNGQLVWAKFLRDERYEQRFPNA 521
>gi|270009348|gb|EFA05796.1| hypothetical protein TcasGA2_TC030575 [Tribolium castaneum]
Length = 633
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPL 50
AYR LHG W+ LVTVKY+R ERY +RFP + P
Sbjct: 593 AYRNLHGWWYAGNLVTVKYVRLERYMQRFPDSPVSGPPF 631
>gi|195996811|ref|XP_002108274.1| hypothetical protein TRIADDRAFT_37071 [Trichoplax adhaerens]
gi|190589050|gb|EDV29072.1| hypothetical protein TRIADDRAFT_37071 [Trichoplax adhaerens]
Length = 351
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
RA ++L+G WF ++T ++L YH FPQA PLKPS
Sbjct: 307 RAVKSLNGRWFAGNMITAQFLSLASYHTTFPQAANANTPLKPS 349
>gi|320163233|gb|EFW40132.1| RNA binding domain-containing protein 39 [Capsaspora owczarzaki
ATCC 30864]
Length = 600
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 14 RTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSN 54
RT+HG WF KL+T Y+ YH RFP+++ L+PS+
Sbjct: 560 RTMHGRWFAGKLITADYVPEPMYHARFPESRDATVALQPSS 600
>gi|196005587|ref|XP_002112660.1| hypothetical protein TRIADDRAFT_25080 [Trichoplax adhaerens]
gi|190584701|gb|EDV24770.1| hypothetical protein TRIADDRAFT_25080 [Trichoplax adhaerens]
Length = 246
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 7 EKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRYSL 60
E + ++ +HG F+ ++V +++ + YH FP A PLKPSND S+
Sbjct: 182 EDAKETFKAMHGCIFDGRIVRARFISNQTYHSLFPDAAKFSEPLKPSNDSVRSM 235
>gi|47217218|emb|CAF96741.1| unnamed protein product [Tetraodon nigroviridis]
Length = 31
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 25/30 (83%)
Query: 24 KLVTVKYLRYERYHERFPQAKALVAPLKPS 53
KLVTVKYLR +RYH+RFP+A+A PLK S
Sbjct: 2 KLVTVKYLRLDRYHQRFPEAQACSQPLKAS 31
>gi|291245052|ref|XP_002742405.1| PREDICTED: MGC81970 protein-like isoform 2 [Saccoglossus
kowalevskii]
Length = 444
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPL 50
A LHG WF K++T Y+ YH FPQA A+ PL
Sbjct: 399 AVNALHGRWFAGKMITAAYVPLANYHALFPQAIAMTQPL 437
>gi|195400471|ref|XP_002058840.1| GJ19700 [Drosophila virilis]
gi|194156191|gb|EDW71375.1| GJ19700 [Drosophila virilis]
Length = 641
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 30/42 (71%)
Query: 13 YRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSN 54
+ ++G WF+ +L+++K+LR ERY RFP++ + + LK SN
Sbjct: 598 HNEINGWWFDKRLISIKFLRLERYLNRFPKSLSNSSYLKSSN 639
>gi|256079594|ref|XP_002576071.1| peptide chain release factor [Schistosoma mansoni]
Length = 1202
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 7 EKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLK 51
E R + ++H +F+ +L+TVK+LR +Y RFP+A ++ PL+
Sbjct: 1153 ETAGRVFHSIHANYFDGRLLTVKFLRDNKYCLRFPEAHSIKQPLQ 1197
>gi|390342940|ref|XP_001198098.2| PREDICTED: RNA-binding protein 39-like [Strongylocentrotus
purpuratus]
Length = 666
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 24/46 (52%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRR 57
A LH WF K++T Y+ YH FPQA + L+PS RR
Sbjct: 620 ALNNLHNRWFAGKMITAAYMPVANYHAIFPQAASATMLLQPSTPRR 665
>gi|353230833|emb|CCD77250.1| putative peptide chain release factor [Schistosoma mansoni]
Length = 794
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 7 EKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLK 51
E R + ++H +F+ +L+TVK+LR +Y RFP+A ++ PL+
Sbjct: 745 ETAGRVFHSIHANYFDGRLLTVKFLRDNKYCLRFPEAHSIKQPLQ 789
>gi|291245050|ref|XP_002742404.1| PREDICTED: MGC81970 protein-like isoform 1 [Saccoglossus
kowalevskii]
Length = 556
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPL 50
A LHG WF K++T Y+ YH FPQA A+ PL
Sbjct: 511 AVNALHGRWFAGKMITAAYVPLANYHALFPQAIAMTQPL 549
>gi|195028422|ref|XP_001987075.1| GH21715 [Drosophila grimshawi]
gi|193903075|gb|EDW01942.1| GH21715 [Drosophila grimshawi]
Length = 668
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 29/42 (69%)
Query: 13 YRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSN 54
+ ++G WF+ +L+++K+LR ERY RFP++ + LK SN
Sbjct: 625 HNEINGWWFDKRLISIKFLRIERYLNRFPKSLSESLYLKSSN 666
>gi|195122684|ref|XP_002005841.1| GI18860 [Drosophila mojavensis]
gi|193910909|gb|EDW09776.1| GI18860 [Drosophila mojavensis]
Length = 639
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 29/42 (69%)
Query: 13 YRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSN 54
+ ++G WF+ +L+++K+LR ERY RFP++ + LK SN
Sbjct: 596 HNEINGWWFDKRLISIKFLRLERYLSRFPKSLSNSLYLKSSN 637
>gi|226479908|emb|CAX73250.1| Inner nuclear membrane protein Man1 (LEM domain-containing protein
3) [Schistosoma japonicum]
Length = 799
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLK 51
R + ++H +F+ +L+TVK+LR +Y RFP+A ++ PL+
Sbjct: 754 RVFHSIHANYFDGRLLTVKFLRDTKYCLRFPEAHSIKLPLR 794
>gi|215820610|ref|NP_001135964.1| RNA binding motif protein 39 [Nasonia vitripennis]
Length = 516
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRR 57
A +LHG WF +++T Y+ YH FP A + + L PS RR
Sbjct: 469 AVNSLHGRWFAGRVITAAYVPVVNYHSLFPDAMSAIQLLIPSAPRR 514
>gi|358339955|dbj|GAA47917.1| inner nuclear membrane protein Man1 [Clonorchis sinensis]
Length = 919
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSN 54
R Y +H +F+ +L+TVK+LR +Y RFP+A + PL ++
Sbjct: 874 RVYHAIHANYFDGRLLTVKFLRDTKYCLRFPEAHGIHVPLNVTD 917
>gi|307195359|gb|EFN77277.1| RNA-binding protein 39 [Harpegnathos saltator]
Length = 370
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRR 57
A +LHG WF +++T Y+ YH FP A + L PS RR
Sbjct: 323 AVNSLHGRWFAGRVITAAYVPVVNYHSLFPDAMTALQLLVPSAPRR 368
>gi|20466772|gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana]
Length = 420
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKAL 46
A R LHG WF K++T Y+ E Y +FP++K +
Sbjct: 386 AQRALHGRWFAGKMITATYMTTEAYEAKFPESKVV 420
>gi|15291743|gb|AAK93140.1| LD24895p [Drosophila melanogaster]
Length = 374
Score = 41.6 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 25/33 (75%)
Query: 13 YRTLHGAWFNSKLVTVKYLRYERYHERFPQAKA 45
++ ++G WF+ +L+++K+LR ERY RFP+ A
Sbjct: 327 HKEINGWWFDKRLISIKFLRLERYLSRFPKPSA 359
>gi|383864352|ref|XP_003707643.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Megachile
rotundata]
Length = 530
Score = 41.6 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRR 57
A +LHG WF +++T Y+ YH FP A + L PS RR
Sbjct: 483 AVNSLHGRWFAGRVITAAYVPVVNYHSLFPDAMTALQLLVPSAPRR 528
>gi|340718898|ref|XP_003397899.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus
terrestris]
Length = 520
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRR 57
A +LHG WF +++T Y+ YH FP A + L PS RR
Sbjct: 473 AVNSLHGRWFAGRVITAAYVPVVNYHSLFPDAMTALQLLVPSAPRR 518
>gi|383864354|ref|XP_003707644.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Megachile
rotundata]
Length = 507
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRR 57
A +LHG WF +++T Y+ YH FP A + L PS RR
Sbjct: 460 AVNSLHGRWFAGRVITAAYVPVVNYHSLFPDAMTALQLLVPSAPRR 505
>gi|350410158|ref|XP_003488966.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus impatiens]
Length = 532
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRR 57
A +LHG WF +++T Y+ YH FP A + L PS RR
Sbjct: 485 AVNSLHGRWFAGRVITAAYVPVVNYHSLFPDAMTALQLLVPSAPRR 530
>gi|350410161|ref|XP_003488967.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus impatiens]
Length = 508
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRR 57
A +LHG WF +++T Y+ YH FP A + L PS RR
Sbjct: 461 AVNSLHGRWFAGRVITAAYVPVVNYHSLFPDAMTALQLLVPSAPRR 506
>gi|340718900|ref|XP_003397900.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus
terrestris]
Length = 508
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRR 57
A +LHG WF +++T Y+ YH FP A + L PS RR
Sbjct: 461 AVNSLHGRWFAGRVITAAYVPVVNYHSLFPDAMTALQLLVPSAPRR 506
>gi|380012525|ref|XP_003690330.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like [Apis
florea]
Length = 506
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRR 57
A +LHG WF +++T Y+ YH FP A + L PS RR
Sbjct: 459 AVNSLHGRWFAGRVITAAYVPVVNYHSLFPDAMTALQLLVPSAPRR 504
>gi|332019312|gb|EGI59819.1| RNA-binding protein 39 [Acromyrmex echinatior]
Length = 528
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRR 57
A +LHG WF +++T Y+ YH FP A + L PS RR
Sbjct: 481 AVNSLHGRWFAGRVITAAYVPVVNYHSLFPDAMTALQLLVPSAPRR 526
>gi|328781105|ref|XP_624668.3| PREDICTED: RNA-binding protein 39-like [Apis mellifera]
Length = 506
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRR 57
A +LHG WF +++T Y+ YH FP A + L PS RR
Sbjct: 459 AVNSLHGRWFAGRVITAAYVPVVNYHSLFPDAMTALQLLVPSAPRR 504
>gi|307180960|gb|EFN68748.1| RNA-binding protein 39 [Camponotus floridanus]
Length = 529
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRR 57
A +LHG WF +++T Y+ YH FP A + L PS RR
Sbjct: 482 AVNSLHGRWFAGRVITAAYVPVVNYHSLFPDAMTALQLLVPSAPRR 527
>gi|334184263|ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251466|gb|AEC06560.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 610
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKAL 46
A R LHG WF K++T Y+ E Y +FP++K +
Sbjct: 576 AQRALHGRWFAGKMITATYMTTEAYEAKFPESKVV 610
>gi|20130339|ref|NP_611873.1| MAN1, isoform B [Drosophila melanogaster]
gi|24762513|ref|NP_726404.1| MAN1, isoform A [Drosophila melanogaster]
gi|7291721|gb|AAF47143.1| MAN1, isoform A [Drosophila melanogaster]
gi|21626711|gb|AAM68294.1| MAN1, isoform B [Drosophila melanogaster]
gi|25012719|gb|AAN71453.1| RE60089p [Drosophila melanogaster]
Length = 650
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 25/33 (75%)
Query: 13 YRTLHGAWFNSKLVTVKYLRYERYHERFPQAKA 45
++ ++G WF+ +L+++K+LR ERY RFP+ A
Sbjct: 603 HKEINGWWFDKRLISIKFLRLERYLSRFPKPSA 635
>gi|148226721|ref|NP_001086950.1| RNA binding motif protein 39 [Xenopus laevis]
gi|50414893|gb|AAH77813.1| Rnpc2-prov protein [Xenopus laevis]
Length = 540
Score = 40.8 bits (94), Expect = 0.100, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
A LHG WF K++T Y+ YH FP + PL PS
Sbjct: 497 AVNALHGRWFAGKMITAAYVPLPTYHSLFPDSMTSTQPLFPS 538
>gi|312374824|gb|EFR22303.1| hypothetical protein AND_15459 [Anopheles darlingi]
Length = 560
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKP 52
A LHG WF +++ Y+ Y+ FP A A+V PL+P
Sbjct: 516 AVNALHGRWFAGRVIGAAYVPLVNYYNLFPDAAAMVTPLQP 556
>gi|388517761|gb|AFK46942.1| unknown [Lotus japonicus]
Length = 175
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAK 44
A R LHG WF K++TV ++ + Y +RFP+++
Sbjct: 143 AQRALHGRWFAGKMITVSFMVPQSYEDRFPESR 175
>gi|334184261|ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251465|gb|AEC06559.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 599
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKAL 46
A R LHG WF K++T Y+ E Y +FP++K +
Sbjct: 565 AQRALHGRWFAGKMITATYMTTEAYEAKFPESKVV 599
>gi|21553746|gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKAL 46
A R LHG WF K++T Y+ E Y +FP++K +
Sbjct: 526 AQRALHGRWFAGKMITATYMTTEAYEAKFPESKVV 560
>gi|18398260|ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor [Arabidopsis thaliana]
gi|133778824|gb|ABO38752.1| At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 561
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKAL 46
A R LHG WF K++T Y+ E Y +FP++K +
Sbjct: 527 AQRALHGRWFAGKMITATYMTTEAYEAKFPESKVV 561
>gi|125808828|ref|XP_001360885.1| GA16380 [Drosophila pseudoobscura pseudoobscura]
gi|54636057|gb|EAL25460.1| GA16380 [Drosophila pseudoobscura pseudoobscura]
Length = 646
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 25/33 (75%)
Query: 13 YRTLHGAWFNSKLVTVKYLRYERYHERFPQAKA 45
+ ++G WF+++L+++K+LR ERY RFP+ A
Sbjct: 599 HNEINGWWFDNRLISIKFLRLERYLSRFPKPAA 631
>gi|195151269|ref|XP_002016570.1| GL11654 [Drosophila persimilis]
gi|194110417|gb|EDW32460.1| GL11654 [Drosophila persimilis]
Length = 646
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 25/33 (75%)
Query: 13 YRTLHGAWFNSKLVTVKYLRYERYHERFPQAKA 45
+ ++G WF+++L+++K+LR ERY RFP+ A
Sbjct: 599 HNEINGWWFDNRLISIKFLRLERYLSRFPKPAA 631
>gi|195489467|ref|XP_002092750.1| GE14363 [Drosophila yakuba]
gi|194178851|gb|EDW92462.1| GE14363 [Drosophila yakuba]
Length = 650
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 13 YRTLHGAWFNSKLVTVKYLRYERYHERFPQAKA 45
+ ++G WF+ +L+++K+LR ERY RFP+ A
Sbjct: 603 HNEINGWWFDKRLISIKFLRLERYLSRFPKPSA 635
>gi|194886017|ref|XP_001976532.1| GG22926 [Drosophila erecta]
gi|190659719|gb|EDV56932.1| GG22926 [Drosophila erecta]
Length = 650
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 13 YRTLHGAWFNSKLVTVKYLRYERYHERFPQAKA 45
+ ++G WF+ +L+++K+LR ERY RFP+ A
Sbjct: 603 HNEINGWWFDKRLISIKFLRLERYLSRFPKPSA 635
>gi|268553731|ref|XP_002634852.1| Hypothetical protein CBG13969 [Caenorhabditis briggsae]
Length = 545
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSN 54
+A LHG WF+ K++T Y+ YH+ FP A PL N
Sbjct: 482 QAVSALHGRWFSGKVITANYVPVNSYHDLFPDAVHARLPLSTRN 525
>gi|195586279|ref|XP_002082905.1| GD11822 [Drosophila simulans]
gi|194194914|gb|EDX08490.1| GD11822 [Drosophila simulans]
Length = 650
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 13 YRTLHGAWFNSKLVTVKYLRYERYHERFPQAKA 45
+ ++G WF+ +L+++K+LR ERY RFP+ A
Sbjct: 603 HNEINGWWFDKRLISIKFLRLERYLSRFPKPSA 635
>gi|195341796|ref|XP_002037491.1| GM18292 [Drosophila sechellia]
gi|194132341|gb|EDW53909.1| GM18292 [Drosophila sechellia]
Length = 650
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 13 YRTLHGAWFNSKLVTVKYLRYERYHERFPQAKA 45
+ ++G WF+ +L+++K+LR ERY RFP+ A
Sbjct: 603 HNEINGWWFDKRLISIKFLRLERYLSRFPKPSA 635
>gi|308473560|ref|XP_003099004.1| hypothetical protein CRE_26746 [Caenorhabditis remanei]
gi|308267807|gb|EFP11760.1| hypothetical protein CRE_26746 [Caenorhabditis remanei]
Length = 651
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPL 50
+A LHG WF+ K++T Y+ YH+ FP A A PL
Sbjct: 557 QAVSALHGRWFSGKVITANYVPVNSYHDLFPDAVAARVPL 596
>gi|147900472|ref|NP_001086350.1| MGC81970 protein [Xenopus laevis]
gi|49522239|gb|AAH75146.1| MGC81970 protein [Xenopus laevis]
Length = 512
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
A LHG WF K++T Y+ YH FP + PL PS
Sbjct: 469 AVNALHGRWFAGKMITAAYVPVPTYHSLFPDSMTSTQPLFPS 510
>gi|217074842|gb|ACJ85781.1| unknown [Medicago truncatula]
Length = 346
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAK 44
A R LHG WF K++T ++ + Y +RFP +K
Sbjct: 314 AQRALHGRWFAGKMITASFMVPQLYEDRFPDSK 346
>gi|301108451|ref|XP_002903307.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097679|gb|EEY55731.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 556
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 7 EKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
E A + LHG WFN + ++V+YL + Y FP+A++ V + S
Sbjct: 509 EAAVSAAKKLHGRWFNKRQISVRYLSSQEYVGMFPEARSAVQTARAS 555
>gi|62122939|ref|NP_001014392.1| RNA binding motif protein 39b [Danio rerio]
gi|61402832|gb|AAH91794.1| RNA binding motif protein 39b [Danio rerio]
Length = 539
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 15 TLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSN 54
+LHG WF K++T Y+ YH FP A L+P N
Sbjct: 499 SLHGRWFAGKMITAAYVPLPTYHNLFPDAATATEVLRPMN 538
>gi|194754379|ref|XP_001959473.1| GF12894 [Drosophila ananassae]
gi|190620771|gb|EDV36295.1| GF12894 [Drosophila ananassae]
Length = 647
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 9/46 (19%)
Query: 13 YRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRRY 58
+ ++G WF+ +L+++K+LR ERY RFP PS D+ Y
Sbjct: 600 HNEINGWWFDKRLISIKFLRLERYLSRFPV---------PSTDQIY 636
>gi|348674007|gb|EGZ13826.1| hypothetical protein PHYSODRAFT_249442 [Phytophthora sojae]
Length = 413
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 14 RTLHGAWFNSKLVTVKYLRYERYHERFPQAKALV 47
+ LHG WFN + ++V+YL + Y FPQA++ V
Sbjct: 371 KKLHGRWFNKRQISVRYLSSQEYVGMFPQARSAV 404
>gi|357612395|gb|EHJ67964.1| putative RNA-binding region-containing protein [Danaus plexippus]
Length = 536
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 15 TLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDR 56
+LHG WF +++T Y+ YH FP A + L PS R
Sbjct: 495 SLHGRWFAGRVITAAYVPLVNYHSLFPDAMTALTLLLPSKQR 536
>gi|195430880|ref|XP_002063476.1| GK21928 [Drosophila willistoni]
gi|194159561|gb|EDW74462.1| GK21928 [Drosophila willistoni]
Length = 662
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 13 YRTLHGAWFNSKLVTVKYLRYERYHERFPQ 42
+ ++G WF+ +L+++K+LR ERY RFP+
Sbjct: 626 HNEINGWWFDKRLISIKFLRLERYLCRFPK 655
>gi|325187692|emb|CCA22234.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 423
Score = 38.1 bits (87), Expect = 0.76, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 7 EKKRRAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALV 47
E +A +HG WFN + ++V++L + Y FP+A++ V
Sbjct: 372 ESAMKAANRMHGRWFNKRQISVRFLSSQEYVGMFPEARSAV 412
>gi|357146380|ref|XP_003573971.1| PREDICTED: RNA-binding protein 39-like [Brachypodium distachyon]
Length = 597
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKAL 46
A R+LHG WF K++T ++ ++Y +FP A+
Sbjct: 563 AQRSLHGRWFAGKMITATFMTAQQYEMKFPDRSAV 597
>gi|297836410|ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
gi|297331927|gb|EFH62346.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
Length = 557
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAK 44
A R LHG WF K++T Y+ Y +FP++K
Sbjct: 523 AQRALHGRWFAGKMITATYMTTVAYEAKFPESK 555
>gi|157108428|ref|XP_001650224.1| splicing factor [Aedes aegypti]
gi|108879330|gb|EAT43555.1| AAEL005046-PA [Aedes aegypti]
Length = 544
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLK 51
A LHG WF +++T Y+ YH FP + A A LK
Sbjct: 500 AVNALHGRWFAGRIITAAYVPLVNYHTLFPDSAAATAMLK 539
>gi|341877935|gb|EGT33870.1| hypothetical protein CAEBREN_20987 [Caenorhabditis brenneri]
Length = 528
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQA 43
+A LHG WF+ K++T Y+ YH+ FP A
Sbjct: 434 QAVSALHGRWFSGKVITANYVPVNSYHDLFPDA 466
>gi|59858555|ref|NP_001012304.1| RNA-binding protein 39 [Danio rerio]
gi|27882534|gb|AAH44487.1| RNA binding motif protein 39a [Danio rerio]
gi|182892014|gb|AAI65689.1| Rbm39a protein [Danio rerio]
Length = 523
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
A LHG WF K++T Y+ YH FP++ L PS
Sbjct: 480 AVSALHGRWFGGKMITAAYVPLPTYHNLFPESVQATQLLIPS 521
>gi|25148310|ref|NP_741301.1| Protein Y55F3AM.3, isoform c [Caenorhabditis elegans]
gi|373220574|emb|CCD74061.1| Protein Y55F3AM.3, isoform c [Caenorhabditis elegans]
Length = 435
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQA 43
+A LHG WF+ K++T Y+ YH+ FP A
Sbjct: 339 QAVSALHGRWFSGKVITANYVPVNSYHDLFPDA 371
>gi|17543644|ref|NP_500025.1| Protein Y55F3AM.3, isoform a [Caenorhabditis elegans]
gi|373220572|emb|CCD74059.1| Protein Y55F3AM.3, isoform a [Caenorhabditis elegans]
Length = 580
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQA 43
+A LHG WF+ K++T Y+ YH+ FP A
Sbjct: 484 QAVSALHGRWFSGKVITANYVPVNSYHDLFPDA 516
>gi|215820612|ref|NP_001135965.1| RNA binding motif protein 39 [Acyrthosiphon pisum]
Length = 501
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALV 47
LHG WF +++T Y+ YH FP+A +L
Sbjct: 460 LHGRWFGGRVITAAYVPVTNYHNLFPEASSLT 491
>gi|198422099|ref|XP_002129220.1| PREDICTED: similar to RNA binding motif protein 39 [Ciona
intestinalis]
Length = 465
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKP 52
LHG +F ++T Y+ YH FP A PLKP
Sbjct: 427 LHGRYFAGNMITAAYVPVVNYHSLFPDAAYSTTPLKP 463
>gi|321472566|gb|EFX83536.1| hypothetical protein DAPPUDRAFT_194972 [Daphnia pulex]
Length = 366
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLK 51
A LHG WF +++T Y+ YH FP + PL+
Sbjct: 326 AVNALHGRWFAGRIITAAYVPLINYHSLFPDSITATTPLR 365
>gi|324507842|gb|ADY43315.1| RNA-binding protein 39 [Ascaris suum]
Length = 618
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
++ +LHG WF+ K++T Y+ Y + FP++ P+ PS
Sbjct: 566 KSVNSLHGRWFSGKVITANYIPVASYSQLFPESVLPRDPILPS 608
>gi|260834973|ref|XP_002612484.1| hypothetical protein BRAFLDRAFT_214383 [Branchiostoma floridae]
gi|229297861|gb|EEN68493.1| hypothetical protein BRAFLDRAFT_214383 [Branchiostoma floridae]
Length = 466
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRR 57
LHG WF K++ Y+ YH FP+A L+P++ ++
Sbjct: 425 LHGRWFAGKMIQANYVPIVNYHALFPEAITATTLLQPASAQQ 466
>gi|74137263|dbj|BAE22009.1| unnamed protein product [Mus musculus]
Length = 169
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 130 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 167
>gi|146197845|dbj|BAF57634.1| rnpc2 protein [Dugesia japonica]
Length = 278
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 15 TLHGAWFNSKLVTVKYLRYERYHERFPQA 43
TLHG F+ +L+T Y+ E YH+ FP++
Sbjct: 239 TLHGRSFDGRLITANYIPLEHYHKMFPES 267
>gi|209155056|gb|ACI33760.1| RNA-binding protein 39 [Salmo salar]
Length = 535
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
A LHG WF K++T Y+ YH FP + L PS
Sbjct: 492 AVNALHGRWFAGKMITAAYVPLPTYHNLFPDSVTATQLLMPS 533
>gi|31873732|emb|CAD97833.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 334 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 371
>gi|426241412|ref|XP_004014585.1| PREDICTED: RNA-binding protein 39 isoform 6 [Ovis aries]
gi|426241416|ref|XP_004014587.1| PREDICTED: RNA-binding protein 39 isoform 8 [Ovis aries]
Length = 373
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 334 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 371
>gi|410055058|ref|XP_003316934.2| PREDICTED: uncharacterized protein LOC458443 isoform 4 [Pan
troglodytes]
gi|410055062|ref|XP_003953767.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391515|ref|XP_004062118.1| PREDICTED: RNA-binding protein 39 isoform 5 [Gorilla gorilla
gorilla]
gi|426391519|ref|XP_004062120.1| PREDICTED: RNA-binding protein 39 isoform 7 [Gorilla gorilla
gorilla]
gi|119596566|gb|EAW76160.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
gi|119596571|gb|EAW76165.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
Length = 373
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 334 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 371
>gi|34365067|emb|CAE45890.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 334 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 371
>gi|324508128|gb|ADY43435.1| RNA-binding protein 39 [Ascaris suum]
Length = 535
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 11 RAYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
++ +LHG WF+ K++T Y+ Y + FP++ P+ PS
Sbjct: 483 KSVNSLHGRWFSGKVITANYIPVASYSQLFPESVLPRDPILPS 525
>gi|403281374|ref|XP_003932163.1| PREDICTED: RNA-binding protein 39 [Saimiri boliviensis boliviensis]
Length = 502
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 463 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 500
>gi|379318255|pdb|2LQ5|A Chain A, Nmr Structure Of The Rna Binding Motif 39 (Rbm39) From Mus
Musculus
Length = 113
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 74 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 111
>gi|297744588|emb|CBI37850.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAK 44
A R LHG WF K++T ++ + Y +FP ++
Sbjct: 395 AQRALHGRWFAGKMITATFMLPQNYEAKFPDSR 427
>gi|168061001|ref|XP_001782480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666033|gb|EDQ52699.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 363
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAK 44
A R LHG WF K++T Y+ Y +FP +
Sbjct: 331 AQRALHGRWFAGKMITATYMSALAYQTKFPDCR 363
>gi|426241414|ref|XP_004014586.1| PREDICTED: RNA-binding protein 39 isoform 7 [Ovis aries]
Length = 367
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 328 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 365
>gi|410055060|ref|XP_003953766.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391517|ref|XP_004062119.1| PREDICTED: RNA-binding protein 39 isoform 6 [Gorilla gorilla
gorilla]
gi|20988961|gb|AAH30493.1| Rbm39 protein [Mus musculus]
gi|34364789|emb|CAE45833.1| hypothetical protein [Homo sapiens]
gi|111598490|gb|AAH82607.1| Rbm39 protein [Mus musculus]
gi|119596570|gb|EAW76164.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_d [Homo
sapiens]
gi|149030835|gb|EDL85862.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_g [Rattus
norvegicus]
Length = 367
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 328 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 365
>gi|334362319|gb|AEG78359.1| RNA binding motif protein 39 [Epinephelus coioides]
Length = 238
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQ---AKALVAPLK 51
LHG WF K++T Y+ YH FP AK L+ P +
Sbjct: 199 LHGRWFAGKMITAAYVPLPTYHNLFPDSVTAKQLLMPAR 237
>gi|62857615|ref|NP_001016788.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|62201342|gb|AAH93451.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|89273890|emb|CAJ83908.1| RNA-binding region (RNP1, RRM) containing 2 [Xenopus (Silurana)
tropicalis]
Length = 542
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
A LHG WF K++T Y+ YH FP + L PS
Sbjct: 499 AVNALHGRWFAGKMITAAYVPLPTYHSLFPDSMTSTQLLFPS 540
>gi|13278367|gb|AAH04000.1| Rbm39 protein [Mus musculus]
Length = 429
Score = 36.6 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 390 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 427
>gi|395863338|ref|XP_003803853.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Otolemur
garnettii]
gi|395863342|ref|XP_003803855.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Otolemur
garnettii]
Length = 487
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 448 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTAAQLLVPS 485
>gi|47212427|emb|CAF93583.1| unnamed protein product [Tetraodon nigroviridis]
Length = 500
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 22/45 (48%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDR 56
A LHG +FN KL+T Y+ YH FP+A L P R
Sbjct: 456 AVNVLHGRFFNGKLITAAYVPLPTYHNLFPEAATANQLLLPPARR 500
>gi|395863336|ref|XP_003803852.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Otolemur
garnettii]
gi|395863340|ref|XP_003803854.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Otolemur
garnettii]
Length = 514
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 475 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTAAQLLVPS 512
>gi|189237575|ref|XP_974855.2| PREDICTED: similar to splicing factor [Tribolium castaneum]
Length = 501
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 15 TLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDR 56
+LHG WF +++T Y+ YH FP A L PS+ +
Sbjct: 460 SLHGRWFAGRVITAAYVPLLNYHSLFPDAMNAAQLLLPSSRK 501
>gi|242015973|ref|XP_002428613.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
gi|212513276|gb|EEB15875.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
Length = 593
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 15 TLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDRR 57
+LHG WF +++T Y+ YH FP A + L P+ R+
Sbjct: 478 SLHGRWFAGRIITAAYVPLLNYHSHFPDALTAMQLLMPTIPRK 520
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 15 TLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSNDR 56
+LHG WF +++T Y+ YH FP A L PS+ +
Sbjct: 481 SLHGRWFAGRVITAAYVPLLNYHSLFPDAMNAAQLLLPSSRK 522
>gi|426241408|ref|XP_004014583.1| PREDICTED: RNA-binding protein 39 isoform 4 [Ovis aries]
Length = 508
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 469 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 506
>gi|359475014|ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
Length = 609
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAK 44
A R LHG WF K++T ++ + Y +FP ++
Sbjct: 577 AQRALHGRWFAGKMITATFMLPQNYEAKFPDSR 609
>gi|336176064|ref|NP_001229528.1| RNA-binding protein 39 isoform c [Homo sapiens]
gi|296199707|ref|XP_002747281.1| PREDICTED: RNA-binding protein 39 isoform 4 [Callithrix jacchus]
gi|332858228|ref|XP_003316932.1| PREDICTED: uncharacterized protein LOC458443 isoform 2 [Pan
troglodytes]
gi|335304745|ref|XP_003360013.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719242|ref|XP_003363966.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|345789990|ref|XP_003433300.1| PREDICTED: RNA-binding protein 39 [Canis lupus familiaris]
gi|426391511|ref|XP_004062116.1| PREDICTED: RNA-binding protein 39 isoform 3 [Gorilla gorilla
gorilla]
gi|124297482|gb|AAI31544.1| RBM39 protein [Homo sapiens]
gi|194389138|dbj|BAG61586.1| unnamed protein product [Homo sapiens]
Length = 508
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 469 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 506
>gi|194386804|dbj|BAG61212.1| unnamed protein product [Homo sapiens]
Length = 502
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 463 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 500
>gi|432101442|gb|ELK29624.1| RNA-binding protein 39 [Myotis davidii]
Length = 491
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 452 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 489
>gi|431894348|gb|ELK04148.1| RNA-binding protein 39 [Pteropus alecto]
Length = 601
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 562 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 599
>gi|426241406|ref|XP_004014582.1| PREDICTED: RNA-binding protein 39 isoform 3 [Ovis aries]
Length = 502
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 463 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 500
>gi|193785136|dbj|BAG54289.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 467 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 504
>gi|336176066|ref|NP_001229529.1| RNA-binding protein 39 isoform d [Homo sapiens]
gi|73991836|ref|XP_865202.1| PREDICTED: RNA-binding protein 39 isoform 16 [Canis lupus
familiaris]
gi|296199705|ref|XP_002747280.1| PREDICTED: RNA-binding protein 39 isoform 3 [Callithrix jacchus]
gi|332858230|ref|XP_003316933.1| PREDICTED: uncharacterized protein LOC458443 isoform 3 [Pan
troglodytes]
gi|335304749|ref|XP_003360015.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719245|ref|XP_003363967.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|426391513|ref|XP_004062117.1| PREDICTED: RNA-binding protein 39 isoform 4 [Gorilla gorilla
gorilla]
Length = 502
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 463 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 500
>gi|426241402|ref|XP_004014580.1| PREDICTED: RNA-binding protein 39 isoform 1 [Ovis aries]
Length = 530
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 491 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 528
>gi|156363387|ref|XP_001626026.1| predicted protein [Nematostella vectensis]
gi|156212886|gb|EDO33926.1| predicted protein [Nematostella vectensis]
Length = 468
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSN 54
A ++LHG WF K + + YH FPQ+ + L+PS
Sbjct: 425 ASKSLHGRWFAGKQIIAAPVPLSNYHTMFPQSISATRSLQPST 467
>gi|118403314|ref|NP_573505.2| RNA-binding protein 39 [Mus musculus]
gi|392346872|ref|XP_003749653.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Rattus
norvegicus]
gi|341941811|sp|Q8VH51.2|RBM39_MOUSE RecName: Full=RNA-binding protein 39; AltName: Full=Coactivator of
activating protein 1 and estrogen receptors;
Short=Coactivator of AP-1 and ERs; AltName:
Full=RNA-binding motif protein 39; AltName:
Full=RNA-binding region-containing protein 2; AltName:
Full=Transcription coactivator CAPER
gi|55991480|gb|AAH86645.1| RNA binding motif protein 39 [Mus musculus]
gi|74151058|dbj|BAE27657.1| unnamed protein product [Mus musculus]
gi|148674237|gb|EDL06184.1| RNA binding motif protein 39, isoform CRA_b [Mus musculus]
Length = 530
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 491 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 528
>gi|35493811|ref|NP_909122.1| RNA-binding protein 39 isoform a [Homo sapiens]
gi|281182530|ref|NP_001162566.1| RNA-binding protein 39 [Papio anubis]
gi|284004921|ref|NP_001164806.1| RNA-binding protein 39 [Oryctolagus cuniculus]
gi|149733225|ref|XP_001501869.1| PREDICTED: RNA-binding protein 39 isoform 1 [Equus caballus]
gi|296199703|ref|XP_002747279.1| PREDICTED: RNA-binding protein 39 isoform 2 [Callithrix jacchus]
gi|332858224|ref|XP_003316931.1| PREDICTED: uncharacterized protein LOC458443 isoform 1 [Pan
troglodytes]
gi|335304742|ref|XP_003360012.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|344279919|ref|XP_003411733.1| PREDICTED: RNA-binding protein 39 isoform 1 [Loxodonta africana]
gi|345789986|ref|XP_864959.2| PREDICTED: RNA-binding protein 39 isoform 3 [Canis lupus
familiaris]
gi|354477982|ref|XP_003501196.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Cricetulus
griseus]
gi|397523808|ref|XP_003831910.1| PREDICTED: RNA-binding protein 39 [Pan paniscus]
gi|426391507|ref|XP_004062114.1| PREDICTED: RNA-binding protein 39 isoform 1 [Gorilla gorilla
gorilla]
gi|28201880|sp|Q14498.2|RBM39_HUMAN RecName: Full=RNA-binding protein 39; AltName: Full=Hepatocellular
carcinoma protein 1; AltName: Full=RNA-binding motif
protein 39; AltName: Full=RNA-binding region-containing
protein 2; AltName: Full=Splicing factor HCC1
gi|405194|gb|AAA16347.1| splicing factor [Homo sapiens]
gi|119596565|gb|EAW76159.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|119596567|gb|EAW76161.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|146327034|gb|AAI41836.1| RNA binding motif protein 39 [Homo sapiens]
gi|164623752|gb|ABY64678.1| RNA binding motif protein 39, isoform 1 (predicted) [Papio anubis]
gi|165971473|gb|AAI58173.1| RNA binding motif protein 39 [Homo sapiens]
gi|166831598|gb|ABY90123.1| RNA binding motif protein 39 isoform a (predicted) [Callithrix
jacchus]
gi|169731519|gb|ACA64891.1| RNA binding motif protein 39 isoform a (predicted) [Callicebus
moloch]
gi|197215647|gb|ACH53039.1| RNA binding motif protein 39 isoform a (predicted) [Otolemur
garnettii]
gi|217038339|gb|ACJ76632.1| RNA binding motif protein 39 isoform a (predicted) [Oryctolagus
cuniculus]
gi|229368730|gb|ACQ63013.1| RNA binding motif protein 39 isoform a (predicted) [Dasypus
novemcinctus]
gi|351702535|gb|EHB05454.1| RNA-binding protein 39 [Heterocephalus glaber]
gi|380783277|gb|AFE63514.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|383408125|gb|AFH27276.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|384939254|gb|AFI33232.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|410218746|gb|JAA06592.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255434|gb|JAA15684.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292900|gb|JAA25050.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292904|gb|JAA25052.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350859|gb|JAA42033.1| RNA binding motif protein 39 [Pan troglodytes]
gi|440902514|gb|ELR53299.1| RNA-binding protein 39 [Bos grunniens mutus]
Length = 530
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 491 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 528
>gi|355784531|gb|EHH65382.1| RNA-binding motif protein 39 [Macaca fascicularis]
Length = 530
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 491 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 528
>gi|444729178|gb|ELW69605.1| RNA-binding protein 39 [Tupaia chinensis]
Length = 467
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 428 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 465
>gi|326523595|dbj|BAJ92968.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQ 42
A R+LHG WF K++T ++ +Y +FP
Sbjct: 557 AQRSLHGRWFAGKMITATFMTAHQYEMKFPD 587
>gi|326504734|dbj|BAK06658.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQ 42
A R+LHG WF K++T ++ +Y +FP
Sbjct: 557 AQRSLHGRWFAGKMITATFMTAHQYEMKFPD 587
>gi|326494786|dbj|BAJ94512.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQ 42
A R+LHG WF K++T ++ +Y +FP
Sbjct: 557 AQRSLHGRWFAGKMITATFMTAHQYEMKFPD 587
>gi|426241404|ref|XP_004014581.1| PREDICTED: RNA-binding protein 39 isoform 2 [Ovis aries]
Length = 524
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 485 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 522
>gi|61557287|ref|NP_001013225.1| RNA-binding protein 39 [Rattus norvegicus]
gi|392346874|ref|XP_003749654.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Rattus
norvegicus]
gi|60552170|gb|AAH91394.1| RNA binding motif protein 39 [Rattus norvegicus]
gi|74196119|dbj|BAE32977.1| unnamed protein product [Mus musculus]
gi|149030834|gb|EDL85861.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Rattus
norvegicus]
Length = 524
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 485 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 522
>gi|410953912|ref|XP_003983612.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39 [Felis
catus]
Length = 523
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 484 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 521
>gi|296199709|ref|XP_002747282.1| PREDICTED: RNA-binding protein 39 isoform 5 [Callithrix jacchus]
Length = 504
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 465 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 502
>gi|194386036|dbj|BAG59582.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 464 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 501
>gi|52545994|emb|CAH18281.2| hypothetical protein [Homo sapiens]
Length = 513
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 474 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 511
>gi|17063213|gb|AAL32373.1| transcription coactivator CAPER [Mus musculus]
Length = 530
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 491 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 528
>gi|281346065|gb|EFB21649.1| hypothetical protein PANDA_004543 [Ailuropoda melanoleuca]
Length = 497
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 458 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 495
>gi|4757926|ref|NP_004893.1| RNA-binding protein 39 isoform b [Homo sapiens]
gi|197097940|ref|NP_001125339.1| RNA-binding protein 39 [Pongo abelii]
gi|149733223|ref|XP_001501876.1| PREDICTED: RNA-binding protein 39 isoform 2 [Equus caballus]
gi|194044529|ref|XP_001925282.1| PREDICTED: RNA-binding protein 39 isoform 2 [Sus scrofa]
gi|296199701|ref|XP_002747278.1| PREDICTED: RNA-binding protein 39 isoform 1 [Callithrix jacchus]
gi|301762104|ref|XP_002916459.1| PREDICTED: RNA-binding protein 39-like [Ailuropoda melanoleuca]
gi|332858226|ref|XP_514808.3| PREDICTED: uncharacterized protein LOC458443 isoform 5 [Pan
troglodytes]
gi|344279921|ref|XP_003411734.1| PREDICTED: RNA-binding protein 39 isoform 2 [Loxodonta africana]
gi|345789988|ref|XP_865124.2| PREDICTED: RNA-binding protein 39 isoform 12 [Canis lupus
familiaris]
gi|354477984|ref|XP_003501197.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Cricetulus
griseus]
gi|426391509|ref|XP_004062115.1| PREDICTED: RNA-binding protein 39 isoform 2 [Gorilla gorilla
gorilla]
gi|75070825|sp|Q5RC80.1|RBM39_PONAB RecName: Full=RNA-binding protein 39; AltName: Full=RNA-binding
motif protein 39
gi|405192|gb|AAA16346.1| splicing factor [Homo sapiens]
gi|55727753|emb|CAH90627.1| hypothetical protein [Pongo abelii]
gi|119596568|gb|EAW76162.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|119596569|gb|EAW76163.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|296480931|tpg|DAA23046.1| TPA: RNA binding motif protein 39 [Bos taurus]
gi|307686241|dbj|BAJ21051.1| RNA binding motif protein 39 [synthetic construct]
gi|344246681|gb|EGW02785.1| RNA-binding protein 39 [Cricetulus griseus]
gi|380783275|gb|AFE63513.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|383408127|gb|AFH27277.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|384939256|gb|AFI33233.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|410218748|gb|JAA06593.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255438|gb|JAA15686.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292902|gb|JAA25051.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350855|gb|JAA42031.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350863|gb|JAA42035.1| RNA binding motif protein 39 [Pan troglodytes]
Length = 524
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 485 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 522
>gi|74179655|dbj|BAE22477.1| unnamed protein product [Mus musculus]
Length = 521
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 482 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 519
>gi|330688445|ref|NP_001193433.1| RNA-binding protein 39 [Bos taurus]
Length = 530
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 491 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 528
>gi|426241410|ref|XP_004014584.1| PREDICTED: RNA-binding protein 39 isoform 5 [Ovis aries]
Length = 530
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 491 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 528
>gi|297259926|ref|XP_002798213.1| PREDICTED: RNA-binding protein 39-like [Macaca mulatta]
Length = 427
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 388 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 425
>gi|194384132|dbj|BAG64839.1| unnamed protein product [Homo sapiens]
Length = 521
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 482 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 519
>gi|148674239|gb|EDL06186.1| RNA binding motif protein 39, isoform CRA_d [Mus musculus]
Length = 507
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 468 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 505
>gi|88682991|gb|AAI05542.1| RBM39 protein [Bos taurus]
Length = 528
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 489 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 526
>gi|395830356|ref|XP_003788297.1| PREDICTED: RNA-binding protein 39 [Otolemur garnettii]
Length = 453
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 414 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 451
>gi|332249061|ref|XP_003273679.1| PREDICTED: RNA-binding protein 39 [Nomascus leucogenys]
Length = 432
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 393 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 430
>gi|417411216|gb|JAA52053.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 499
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 460 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 497
>gi|417411155|gb|JAA52027.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 491
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K++T Y+ YH FP + L PS
Sbjct: 452 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPS 489
>gi|340708259|pdb|3S6E|A Chain A, Crystal Structure Of A Rna Binding Motif Protein 39
(Rbm39) From Mus Musculus At 0.95 A Resolution
gi|340708260|pdb|3S6E|B Chain B, Crystal Structure Of A Rna Binding Motif Protein 39
(Rbm39) From Mus Musculus At 0.95 A Resolution
Length = 114
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 18/40 (45%)
Query: 14 RTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
LHG WF K +T Y+ YH FP + L PS
Sbjct: 73 NALHGRWFAGKXITAAYVPLPTYHNLFPDSXTATQLLVPS 112
>gi|326931688|ref|XP_003211958.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like
[Meleagris gallopavo]
Length = 571
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQ---AKALVAPLK 51
LHG WF K++T Y+ YH FP A L+ P++
Sbjct: 532 LHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVR 570
>gi|449265754|gb|EMC76900.1| RNA-binding protein 39, partial [Columba livia]
Length = 423
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQ---AKALVAPLK 51
LHG WF K++T Y+ YH FP A L+ P++
Sbjct: 384 LHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVR 422
>gi|432858816|ref|XP_004068953.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Oryzias latipes]
Length = 529
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQA----KALVAPLK 51
A LHG +F K++T Y+ YH+ FP++ + LV PL+
Sbjct: 485 AVNALHGRFFGGKMITAAYVPLPTYHKLFPESVTATQLLVPPLR 528
>gi|348503003|ref|XP_003439056.1| PREDICTED: RNA-binding protein 39-like [Oreochromis niloticus]
Length = 498
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQ---AKALVAP 49
LHG WF K++T Y+ YH FP AK L+ P
Sbjct: 459 LHGRWFAGKMITAAYVPLPTYHNLFPDSVTAKQLLMP 495
>gi|194758325|ref|XP_001961412.1| GF14957 [Drosophila ananassae]
gi|190615109|gb|EDV30633.1| GF14957 [Drosophila ananassae]
Length = 594
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQAKA---LVAPLKPSND 55
A LHG WF +++T Y+ YH FP A + L+A + ++D
Sbjct: 547 AVNALHGRWFAGRVITAAYVPLVNYHSMFPDATSAANLIASTRKNSD 593
>gi|47223170|emb|CAG11305.1| unnamed protein product [Tetraodon nigroviridis]
Length = 515
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQ---AKALVAP 49
LHG WF K++T Y+ YH FP AK L+ P
Sbjct: 476 LHGRWFAGKMITAAYVPLPTYHNLFPDSVTAKQLLMP 512
>gi|432865706|ref|XP_004070573.1| PREDICTED: RNA-binding protein 39-like [Oryzias latipes]
Length = 516
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQ---AKALVAP 49
LHG WF K++T Y+ YH FP AK L+ P
Sbjct: 477 LHGRWFARKMITAAYVPLPTYHNLFPDSVTAKQLLMP 513
>gi|395505312|ref|XP_003756986.1| PREDICTED: RNA-binding protein 39 [Sarcophilus harrisii]
Length = 557
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQ---AKALVAPLK 51
LHG WF K++T Y+ YH FP A L+ P++
Sbjct: 518 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPVR 556
>gi|410899827|ref|XP_003963398.1| PREDICTED: RNA-binding protein 39-like [Takifugu rubripes]
Length = 500
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQ---AKALVAP 49
LHG WF K++T Y+ YH FP AK L+ P
Sbjct: 461 LHGRWFAGKMITAAYVPLPTYHNLFPDSVTAKQLLMP 497
>gi|126291198|ref|XP_001371677.1| PREDICTED: RNA-binding protein 39 isoform 2 [Monodelphis domestica]
Length = 533
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQ---AKALVAPLK 51
LHG WF K++T Y+ YH FP A L+ P++
Sbjct: 494 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPVR 532
>gi|432858814|ref|XP_004068952.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Oryzias latipes]
Length = 502
Score = 34.7 bits (78), Expect = 8.5, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQA----KALVAPLK 51
A LHG +F K++T Y+ YH+ FP++ + LV PL+
Sbjct: 458 AVNALHGRFFGGKMITAAYVPLPTYHKLFPESVTATQLLVPPLR 501
>gi|126291195|ref|XP_001371651.1| PREDICTED: RNA-binding protein 39 isoform 1 [Monodelphis domestica]
Length = 524
Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQ---AKALVAPLK 51
LHG WF K++T Y+ YH FP A L+ P++
Sbjct: 485 LHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPVR 523
>gi|224077247|ref|XP_002192236.1| PREDICTED: RNA-binding protein 39 [Taeniopygia guttata]
Length = 522
Score = 34.3 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQ---AKALVAPLK 51
LHG WF K++T Y+ YH FP A L+ P++
Sbjct: 483 LHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVR 521
>gi|226469234|emb|CAX70096.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 327
Score = 34.3 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSN 54
LHG +F+ +L+T Y+ YH+ FP + L PS+
Sbjct: 289 LHGRYFSGRLITAAYVPLINYHQLFPDSVTAKTLLHPSS 327
>gi|256082942|ref|XP_002577710.1| splicing factor [Schistosoma mansoni]
gi|360043601|emb|CCD81147.1| putative splicing factor [Schistosoma mansoni]
Length = 327
Score = 34.3 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPSN 54
LHG +F+ +L+T Y+ YH+ FP + L PS+
Sbjct: 289 LHGRYFSGRLITAAYVPLINYHQLFPDSVTAKTLLHPSS 327
>gi|118100450|ref|XP_425690.2| PREDICTED: RNA-binding protein 39 [Gallus gallus]
gi|363741409|ref|XP_003642487.1| PREDICTED: RNA-binding protein 39-like [Gallus gallus]
Length = 522
Score = 34.3 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 16 LHGAWFNSKLVTVKYLRYERYHERFPQ---AKALVAPLK 51
LHG WF K++T Y+ YH FP A L+ P++
Sbjct: 483 LHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVR 521
>gi|405963791|gb|EKC29337.1| RNA-binding protein 39 [Crassostrea gigas]
Length = 557
Score = 34.3 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 14 RTLHGAWFNSKLVTVKYLRYERYHERFPQAKALVAPLKPS 53
R LHG +F K++T Y+ YH FP A L PS
Sbjct: 497 RALHGRYFGGKMITAAYVPLPNYHSLFPDAVRANQLLLPS 536
>gi|195155759|ref|XP_002018768.1| GL25979 [Drosophila persimilis]
gi|194114921|gb|EDW36964.1| GL25979 [Drosophila persimilis]
Length = 289
Score = 34.3 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 12 AYRTLHGAWFNSKLVTVKYLRYERYHERFPQA---KALVAPLKPSND 55
A LHG WF +++T Y+ YH FP + LVA + + D
Sbjct: 241 AVNALHGRWFAGRVITAAYVPVVNYHSMFPDSVGTSELVALTRKNTD 287
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.133 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,003,215,757
Number of Sequences: 23463169
Number of extensions: 28860096
Number of successful extensions: 55975
Number of sequences better than 100.0: 247
Number of HSP's better than 100.0 without gapping: 243
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 55732
Number of HSP's gapped (non-prelim): 247
length of query: 63
length of database: 8,064,228,071
effective HSP length: 35
effective length of query: 28
effective length of database: 7,243,017,156
effective search space: 202804480368
effective search space used: 202804480368
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)